Summary for PINK1 (NES ID: 316)
Full Name
Serine/threonine-protein kinase PINK1, mitochondrial
UniProt Alternative Names
BRPK, PTEN-induced putative kinase protein 1
Organism
Homo sapiens (Human)
Experimental Evidence for CRM1-mediated Export
Mutations That Affect Nuclear Export
Mutations That Affect CRM1 Binding
Unknown
Functional Export Signals
Secondary Structure of Export Signal
Unknown
Other Residues Important for Export
Unknown
Sequence
Show FASTA Format
>sp|Q9BXM7|PINK1_HUMAN Serine/threonine-protein kinase PINK1, mitochondrial OS=Homo sapiens OX=9606 GN=PINK1 PE=1 SV=1
MAVRQALGRGLQLGRALLLRFTGKPGRAYGLGRPGPAAGCVRGERPGWAAGPGAEPRRVG
LGLPNRLRFFRQSVAGLAARLQRQFVVRAWGCAGPCGRAVFLAFGLGLGLIEEKQAESRR
AVSACQEIQAIFTQKSKPGPDPLDTRRLQGFRLEEYLIGQSIGKGCSAAVYEATMPTLPQ
NLEVTKSTGLLPGRGPGTSAPGEGQERAPGAPAFPLAIKMMWNISAGSSSEAILNTMSQE
LVPASRVALAGEYGAVTYRKSKRGPKQLAPHPNIIRVLRAFTSSVPLLPGALVDYPDVLP
SRLHPEGLGHGRTLFLVMKNYPCTLRQYLCVNTPSPRLAAMMLLQLLEGVDHLVQQGIAH
RDLKSDNILVELDPDGCPWLVIADFGCCLADESIGLQLPFSSWYVDRGGNGCLMAPEVST
ARPGPRAVIDYSKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPESVPP
DVRQLVRALLQREASKRPSARVAANVLHLSLWGEHILALKNLKLDKMVGWLLQQSAATLL
ANRLTEKCCVETKMKMLFLANLECETLCQAALLLCSWRAAL
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 916788643100135887742089998778899999874213679987789997433358
Pred: CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: MAVRQALGRGLQLGRALLLRFTGKPGRAYGLGRPGPAAGCVRGERPGWAAGPGAEPRRVG
10 20 30 40 50 60
Conf: 897410013110113468999888788541389998504566543046853144687488
Pred: CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHH
AA: LGLPNRLRFFRQSVAGLAARLQRQFVVRAWGCAGPCGRAVFLAFGLGLGLIEEKQAESRR
70 80 90 100 110 120
Conf: 887758789986106999999988655578765200022424886048787520689986
Pred: HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCC
AA: AVSACQEIQAIFTQKSKPGPDPLDTRRLQGFRLEEYLIGQSIGKGCSAAVYEATMPTLPQ
130 140 150 160 170 180
Conf: 621223369899999999999998888999999740000003777899836898511767
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHCCCC
AA: NLEVTKSTGLLPGRGPGTSAPGEGQERAPGAPAFPLAIKMMWNISAGSSSEAILNTMSQE
190 200 210 220 230 240
Conf: 524732211266442011024689887789986675721440378788897677999988
Pred: CCCCCHHHHCCCCCCCHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
AA: LVPASRVALAGEYGAVTYRKSKRGPKQLAPHPNIIRVLRAFTSSVPLLPGALVDYPDVLP
250 260 270 280 290 300
Conf: 988999888763399994146878777875339997899999999999999987547113
Pred: CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
AA: SRLHPEGLGHGRTLFLVMKNYPCTLRQYLCVNTPSPRLAAMMLLQLLEGVDHLVQQGIAH
310 320 330 340 350 360
Conf: 479998701133999998399812520014577887567765302447855666870351
Pred: CCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
AA: RDLKSDNILVELDPDGCPWLVIADFGCCLADESIGLQLPFSSWYVDRGGNGCLMAPEVST
370 380 390 400 410 420
Conf: 148998410157412889999999981999998777622203445464689999999998
Pred: CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
AA: ARPGPRAVIDYSKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPESVPP
430 440 450 460 470 480
Conf: 899999996521989999999999998687316136753038946899999999999998
Pred: HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHH
AA: DVRQLVRALLQREASKRPSARVAANVLHLSLWGEHILALKNLKLDKMVGWLLQQSAATLL
490 500 510 520 530 540
Conf: 04478740268899999860129999999999997544129
Pred: CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
AA: ANRLTEKCCVETKMKMLFLANLECETLCQAALLLCSWRAAL
550 560 570 580
Show Conservation Score by AL2CO
1 M -1.000 *
2 A -1.000 *
3 V -1.000 *
4 R -1.000 *
5 Q -1.000 *
6 A -1.000 *
7 L -1.000 *
8 G -1.000 *
9 R -1.000 *
10 G -1.000 *
11 L -1.000 *
12 Q -1.000 *
13 L -1.000 *
14 G -1.000 *
15 R -1.000 *
16 A -1.000 *
17 L -1.000 *
18 L -1.000 *
19 L -1.000 *
20 R -1.000 *
21 F -1.000 *
22 T -1.000 *
23 G -1.000 *
24 K -1.000 *
25 P -1.000 *
26 G -1.000 *
27 R -1.000 *
28 A -1.000 *
29 Y -1.000 *
30 G -1.000 *
31 L -1.000 *
32 G -1.000 *
33 R -1.000 *
34 P -1.000 *
35 G -1.000 *
36 P -1.000 *
37 A -1.000 *
38 A -1.000 *
39 G -1.000 *
40 C -1.000 *
41 V -1.000 *
42 R -1.000 *
43 G -1.000 *
44 E -1.000 *
45 R -1.000 *
46 P -1.000 *
47 G -1.000 *
48 W -1.000 *
49 A -1.000 *
50 A -1.000 *
51 G -1.000 *
52 P -1.000 *
53 G -1.000 *
54 A -1.000 *
55 E -1.000 *
56 P -1.000 *
57 R -1.000 *
58 R -1.000 *
59 V -1.000 *
60 G -1.000 *
61 L -1.000 *
62 G -1.000 *
63 L -1.000 *
64 P -1.000 *
65 N -1.000 *
66 R -1.000 *
67 L -1.000 *
68 R -1.000 *
69 F -1.000 *
70 F -1.000 *
71 R -1.000 *
72 Q -1.000 *
73 S -1.000 *
74 V -1.000 *
75 A -1.000 *
76 G -1.000 *
77 L -1.000 *
78 A -1.000 *
79 A -1.000 *
80 R -1.000 *
81 L -1.000 *
82 Q -1.000 *
83 R -1.000 *
84 Q -1.000 *
85 F -1.000 *
86 V -1.000 *
87 V -1.000 *
88 R -1.000 *
89 A -1.000 *
90 W -1.000 *
91 G -1.000 *
92 C -1.000 *
93 A -1.000 *
94 G -1.000 *
95 P -1.000 *
96 C -1.000 *
97 G -1.000 *
98 R -1.000 *
99 A -1.000 *
100 V -1.000 *
101 F -1.000 *
102 L -1.000 *
103 A -1.000 *
104 F -1.000 *
105 G -1.000 *
106 L -1.000 *
107 G -1.000 *
108 L -1.000 *
109 G -1.000 *
110 L -1.000 *
111 I -1.000 *
112 E -1.000 *
113 E -1.000 *
114 K -1.000 *
115 Q -1.000 *
116 A -1.000 *
117 E -1.000 *
118 S -1.000 *
119 R -1.000 *
120 R -1.000 *
121 A -1.000 *
122 V -1.000 *
123 S -1.000 *
124 A -1.000 *
125 C -1.000 *
126 Q -1.000 *
127 E -1.000 *
128 I -1.000 *
129 Q -1.000 *
130 A -1.000 *
131 I -1.000 *
132 F -1.000 *
133 T -1.000 *
134 Q -1.000 *
135 K -1.000 *
136 S -1.000 *
137 K -1.000 *
138 P -1.000 *
139 G -1.000 *
140 P -1.000 *
141 D -1.000 *
142 P -1.000 *
143 L -1.000 *
144 D -1.000 *
145 T -1.000 *
146 R -1.000 *
147 R -1.000 *
148 L -1.000 *
149 Q -1.000 *
150 G -1.000 *
151 F -1.000 *
152 R 0.053
153 L 0.116
154 E 0.184
155 E -0.478
156 Y 0.570
157 L -0.100
158 I 0.249
159 G 0.527
160 Q 0.249
161 S -0.355
162 I 1.132
163 G 0.532
164 K 0.047
165 G 1.253
166 C 0.392
167 S -0.306
168 A 0.588
169 A 0.033
170 V 0.316
171 Y -0.161
172 E -0.208
173 A -0.171
174 T 0.021
175 M -0.579
176 P -0.303
177 T -0.656
178 L -0.674
179 P -0.794
180 Q -0.720
181 N -0.729
182 L -0.812
183 E -0.634
184 V -0.797
185 T -0.482
186 K -0.504
187 S -0.549
188 T -0.818
189 G -1.000 *
190 L -1.000 *
191 L -0.757
192 P -0.478
193 G -0.646
194 R -0.640
195 G -0.642
196 P -0.437
197 G -0.775
198 T -0.600
199 S -0.666
200 A -0.520
201 P -0.657
202 G -0.817
203 E -0.768
204 G -0.585
205 Q -0.813
206 E -0.630
207 R -0.833
208 A -0.773
209 P -0.733
210 G -0.766
211 A -0.753
212 P -0.721
213 A -0.797
214 F -0.780
215 P -0.554
216 L -0.667
217 A -0.739
218 I -0.720
219 K -0.415
220 M -0.714
221 M -0.669
222 W -0.602
223 N -0.473
224 I -0.744
225 S -0.685
226 A -0.776
227 G -0.295
228 S -0.506
229 S -0.572
230 S -0.720
231 E -0.861
232 A -0.505
233 I -0.520
234 L -0.661
235 N -0.527
236 T -0.546
237 M -0.857
238 S -0.631
239 Q -0.686
240 E -0.382
241 L -0.782
242 V -0.075
243 P -0.329
244 A 0.039
245 S -0.619
246 R -0.665
247 V -0.546
248 A -0.710
249 L -0.705
250 A -0.615
251 G -0.603
252 E -0.640
253 Y -0.827
254 G -0.496
255 A -0.519
256 V -0.529
257 T -0.914
258 Y -0.813
259 R -0.596
260 K -0.734
261 S -0.862
262 K -0.509
263 R -0.839
264 G -0.514
265 P -0.449
266 K -0.674
267 Q -0.531
268 L -0.810
269 A -0.148
270 P -0.736
271 H 0.844
272 P 0.084
273 N -0.168
274 I 0.410
275 I 0.729
276 R -0.220
277 V -0.349
278 L -0.782
279 R -0.714
280 A -0.430
281 F -0.467
282 T -0.607
283 S -0.142
284 S -0.581
285 V -0.641
286 P -0.292
287 L -0.667
288 L -0.379
289 P -0.600
290 G -0.683
291 A -0.781
292 L -0.467
293 V -0.642
294 D -0.370
295 Y 0.832
296 P 0.390
297 D -0.197
298 V 0.648
299 L 0.923
300 P -0.210
301 S -0.504
302 R -0.618
303 L -0.028
304 H -0.360
305 P -0.172
306 E -0.467
307 G -0.281
308 L -0.468
309 G -0.087
310 H -0.354
311 G -0.220
312 R -0.421
313 T -0.411
314 L 0.863
315 F 0.335
316 L -0.076
317 V 0.017
318 M 0.213
319 K -0.518
320 N -0.793
321 Y -0.333
322 P -0.207
323 C -0.421
324 T 0.023
325 L 0.226
326 R -0.274
327 Q 0.192
328 Y 0.424
329 L 0.076
330 C -0.566
331 V -0.569
332 N -0.505
333 T -0.797
334 P 0.050
335 S -0.228
336 P -0.429
337 R -0.787
338 L -0.415
339 A 0.369
340 A -0.234
341 M -0.754
342 M 0.665
343 L 0.572
344 L -0.256
345 Q 1.095
346 L 1.369
347 L 0.866
348 E -0.029
349 G 1.800
350 V 1.511
351 D -0.608
352 H 1.166
353 L 1.435
354 V -0.077
355 Q -0.292
356 Q -0.144
357 G -0.127
358 I 1.745
359 A 0.707
360 H 2.826
361 R 3.815
362 D 4.358
363 L 2.569
364 K 4.358
365 S 1.032
366 D 1.579
367 N 4.358
368 I 1.521
369 L 2.725
370 V 1.035
371 E -0.348
372 L -0.692
373 D -0.040
374 P -0.481
375 D -0.397
376 G -0.548
377 C -0.659
378 P -0.017
379 W -0.629
380 L 1.833
381 V 0.662
382 I 1.548
383 A 0.848
384 D 3.300
385 F 2.706
386 G 3.281
387 C 0.042
388 C 1.815
389 L -0.232
390 A -0.599
391 D -0.425
392 E -0.494
393 S -0.457
394 I -0.882
395 G -0.348
396 L -0.363
397 Q -0.544
398 L -0.585
399 P -0.447
400 F -0.447
401 S -0.662
402 S -0.266
403 W -0.984
404 Y -0.571
405 V -0.431
406 D -0.198
407 R 0.132
408 G 0.147
409 G 3.644
410 N 1.957
411 G -0.084
412 C -0.394
413 L 1.300
414 M 0.473
415 A 1.935
416 P 3.785
417 E 2.528
418 V 1.594
419 S 0.092
420 T -0.498
421 A 0.048
422 R -0.616
423 P 0.020
424 G 0.994
425 P -0.644
426 R -0.459
427 A -0.248
428 V -0.639
429 I -1.000 *
430 D 1.564
431 Y 0.628
432 S -0.252
433 K 0.556
434 A 1.348
435 D 3.843
436 A 0.318
437 W 3.391
438 A 2.224
439 V 0.699
440 G 2.969
441 A 0.811
442 I 1.323
443 A 0.586
444 Y 1.686
445 E 0.593
446 I 2.106
447 F 0.863
448 G 0.551
449 L -0.426
450 V -0.847
451 N 0.391
452 P 3.181
453 F 2.956
454 Y -0.702
455 G -0.093
456 Q -0.475
457 G -0.221
458 K -0.650
459 A -0.832
460 H -0.738
461 L 0.969
462 E -0.443
463 S -0.482
464 R -0.427
465 S 0.014
466 Y -0.369
467 Q -0.581
468 E -0.412
469 A -0.716
470 Q -0.378
471 L -0.397
472 P 0.203
473 A -0.519
474 L -0.322
475 P 0.331
476 E -0.474
477 S -0.828
478 V 0.435
479 P 0.902
480 P -0.805
481 D -0.303
482 V 0.680
483 R -0.060
484 Q -0.616
485 L 1.493
486 V 1.304
487 R -0.638
488 A -0.313
489 L 1.291
490 L 2.231
491 Q -0.451
492 R -0.033
493 E 0.668
494 A 0.215
495 S -0.538
496 K -0.011
497 R 3.855
498 P 0.466
499 S 0.307
500 A 0.551
501 R -0.496
502 V -0.491
503 A 0.879
504 A 0.157
505 N 0.005
506 V 0.006
507 L -0.249
508 H -0.264
509 L -0.325
510 S -0.735
511 L -0.479
512 W -0.766
513 G -0.534
514 E -0.148
515 H -0.634
516 I -0.778
517 L -0.652
518 A -0.779
519 L -0.720
520 K -0.566
521 N -0.507
522 L -0.793
523 K -0.662
524 L -0.814
525 D -0.628
526 K -0.559
527 M -0.262
528 V -0.372
529 G -0.235
530 W -0.633
531 L -0.382
532 L -0.216
533 Q -0.468
534 Q -0.306
535 S -0.220
536 A -0.146
537 A -0.342
538 T -0.533
539 L -0.477
540 L -0.032
541 A -0.587
542 N -0.609
543 R -0.342
544 L -0.615
545 T -0.640
546 E -0.672
547 K -0.449
548 C -0.575
549 C -0.786
550 V -0.020
551 E -0.316
552 T -0.712
553 K -0.378
554 M 0.287
555 K 0.192
556 M -0.341
557 L -0.508
558 F 0.089
559 L 0.169
560 A -0.143
561 N -1.000 *
562 L -1.000 *
563 E -1.000 *
564 C -1.000 *
565 E -1.000 *
566 T -1.000 *
567 L -1.000 *
568 C -1.000 *
569 Q -1.000 *
570 A -1.000 *
571 A -1.000 *
572 L -1.000 *
573 L -1.000 *
574 L -1.000 *
575 C -1.000 *
576 S -1.000 *
577 W -1.000 *
578 R -1.000 *
579 A -1.000 *
580 A -1.000 *
581 L -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 316.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MAVRQALGRG LQLGRALLLR FTGKPGRAYG LGRPGPAAGC VRGERPGWAA GPGAEPRRVG
70 80 90 100 110 120
LGLPNRLRFF RQSVAGLAAR LQRQFVVRAW GCAGPCGRAV FLAFGLGLGL IEEKQAESRR
130 140 150 160 170 180
AVSACQEIQA IFTQKSKPGP DPLDTRRLQG FRLEEYLIGQ SIGKGCSAAV YEATMPTLPQ
190 200 210 220 230 240
NLEVTKSTGL LPGRGPGTSA PGEGQERAPG APAFPLAIKM MWNISAGSSS EAILNTMSQE
250 260 270 280 290 300
LVPASRVALA GEYGAVTYRK SKRGPKQLAP HPNIIRVLRA FTSSVPLLPG ALVDYPDVLP
310 320 330 340 350 360
SRLHPEGLGH GRTLFLVMKN YPCTLRQYLC VNTPSPRLAA MMLLQLLEGV DHLVQQGIAH
370 380 390 400 410 420
RDLKSDNILV ELDPDGCPWL VIADFGCCLA DESIGLQLPF SSWYVDRGGN GCLMAPEVST
430 440 450 460 470 480
ARPGPRAVID YSKADAWAVG AIAYEIFGLV NPFYGQGKAH LESRSYQEAQ LPALPESVPP
490 500 510 520 530 540
DVRQLVRALL QREASKRPSA RVAANVLHLS LWGEHILALK NLKLDKMVGW LLQQSAATLL
550 560 570 580
ANRLTEKCCV ETKMKMLFLA NLECETLCQA ALLLCSWRAA L
3D Structures in PDB
Not Available
Comments
Mutations of PINK1 causes Parkinson’d Disease. PINK1 is imported into the mitochondria, cleaved by the PARL protein between residues 103 and 104, and released back into the cytoplasm. Cleaved mature PINK1 (ΔM104PINK1) then resides in the cytoplasm. It enhances formation of aggregasomes and autophagy, thus important for stress-induced proteasome-mediated cell death. Upon proteasome dysfunction, PINK1 is mono-ubiquitinated and goes into the nucleus. When treated with MG132, M104PINK1 aggregates in the cytoplasm and a fraction enters the nucleus, and LMB increases nuclear PINK1 in cells treated with MG132. An NES was identified at the C-terminus of PINK1. Using NES consensus sequences, the authors found a match between residues 510-524, which is conserved in several species. WT NES and NES mutant L511/L517 are cytoplasmic, but LMB caused them to be in the nucleus. NES mutant L511/L517/L522/L534 is in the nucleus. An NLS-mCherry-NES is both in the nucleus and the cytoplasm but LMB caused it to be nuclear.
References
[1]. "Proteasome Inhibition Promotes Mono-Ubiquitination and Nuclear Translocation of Mature (52 kDa) PINK1"
Sun L, Büeler H. (2019)
Biochem Biophys Res Commun,
517(2):376-382
PubMedUser Input
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.