Show FASTA Format
>sp|P10205|TEG4_HHV11 Tegument protein UL21 OS=Human herpesvirus 1 (strain 17) OX=10299 GN=UL21 PE=1 SV=1
MELSYATTMHYRDVVFYVTTDRNRAYFVCGGCVYSVGRPCASQPGEIAKFGLVVRGTGPD
DRVVANYVRSELRQRGLQDVRPIGEDEVFLDSVCLLNPNVSSELDVINTNDVEVLDECLA
EYCTSLRTSPGVLISGLRVRAQDRIIELFEHPTIVNVSSHFVYTPSPYVFALAQAHLPRL
PSSLEALVSGLFDGIPAPRQPLDAHNPRTDVVITGRRAPRPIAGSGAGSGGAGAKRATVS
EFVQVKHIDRVGPAGVSPAPPPNNTDSSSLVPGAQDSAPPGPTLRELWWVFYAADRALEE
PRADSGLTREEVRAVRGFREQAWKLFGSAGAPRAFIGAALGLSPLQKLAVYYYIIHRERR
LSPFPALVRLVGRYTQRHGLYVPRPDDPVLADAINGLFRDALAAGTTAEQLLMFDLLPPK
DVPVGSDVQADSTALLRFIESQRLAVPGGVISPEHVAYLGAFLSVLYAGRGRMSAATHTA
RLTGVTSLVLAVGDVDRLSAFDRGAAGAASRTRAAGYLDVLLTVRLARSQHGQSV
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 942200368871459999589975999958789972278999987303233587038998
Pred: CCCCCEEEEEEECEEEEEECCCCEEEEEECCEEEEECCCCCCCCCCEEEEEEEEECCCCC
AA: MELSYATTMHYRDVVFYVTTDRNRAYFVCGGCVYSVGRPCASQPGEIAKFGLVVRGTGPD
10 20 30 40 50 60
Conf: 558999998998751998888899990587410123999985000026886322421000
Pred: CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: DRVVANYVRSELRQRGLQDVRPIGEDEVFLDSVCLLNPNVSSELDVINTNDVEVLDECLA
70 80 90 100 110 120
Conf: 022013377833898546405675387136762641488807628831001111227878
Pred: CEEECCCCCCCEEEEEEEECCCCCEEEECCCCEEEECCCCEEECCCCCHHHHHCCCCCCC
AA: EYCTSLRTSPGVLISGLRVRAQDRIIELFEHPTIVNVSSHFVYTPSPYVFALAQAHLPRL
130 140 150 160 170 180
Conf: 545999994240799899999999999730898257788667799999899888520220
Pred: CHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEC
AA: PSSLEALVSGLFDGIPAPRQPLDAHNPRTDVVITGRRAPRPIAGSGAGSGGAGAKRATVS
190 200 210 220 230 240
Conf: 652677630458999889999999999998889888999995589999999774444228
Pred: CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
AA: EFVQVKHIDRVGPAGVSPAPPPNNTDSSSLVPGAQDSAPPGPTLRELWWVFYAADRALEE
250 260 270 280 290 300
Conf: 898999989999987899999998844789985333556798846899999999984189
Pred: CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
AA: PRADSGLTREEVRAVRGFREQAWKLFGSAGAPRAFIGAALGLSPLQKLAVYYYIIHRERR
310 320 330 340 350 360
Conf: 997489999875331048989999991478999988999999999999999840489998
Pred: CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AA: LSPFPALVRLVGRYTQRHGLYVPRPDDPVLADAINGLFRDALAAGTTAEQLLMFDLLPPK
370 380 390 400 410 420
Conf: 999996146659999999983023699999966899999999988917999356888874
Pred: CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AA: DVPVGSDVQADSTALLRFIESQRLAVPGGVISPEHVAYLGAFLSVLYAGRGRMSAATHTA
430 440 450 460 470 480
Conf: 3118236889986610124334697762444559989999999986004689789
Pred: HHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AA: RLTGVTSLVLAVGDVDRLSAFDRGAAGAASRTRAAGYLDVLLTVRLARSQHGQSV
490 500 510 520 530
Show Conservation Score by AL2CO
1 M 3.077
2 E 1.399
3 L 0.676
4 S -0.684
5 Y 3.077
6 A -1.086
7 T -0.104
8 T 0.748
9 M -0.696
10 H -0.734
11 Y 1.009
12 R 0.080
13 D 1.328
14 V 1.878
15 V -0.373
16 F 1.649
17 Y 3.077
18 V 0.079
19 T -0.428
20 T -0.496
21 D -0.573
22 R 0.332
23 N -0.908
24 R 0.417
25 A 0.684
26 Y 1.915
27 F 1.899
28 V -0.268
29 C 0.183
30 G 2.398
31 G 3.077
32 C 1.099
33 V 1.099
34 Y -0.023
35 S 1.137
36 V 0.468
37 G -0.774
38 R 2.182
39 P 1.733
40 C -0.947
41 A -1.137
42 S -0.609
43 Q -1.364
44 P -1.283
45 G -0.837
46 E 0.617
47 I 0.216
48 A 0.511
49 K 2.455
50 F 1.407
51 G 3.077
52 L 0.774
53 V 0.297
54 V 1.196
55 R 2.420
56 G 1.871
57 T -0.873
58 G -0.095
59 P -0.239
60 D -0.741
61 D 0.804
62 R 0.331
63 V -0.275
64 V 0.636
65 A 1.260
66 N 0.636
67 Y 1.431
68 V 0.965
69 R 1.242
70 S 0.750
71 E 2.205
72 L 1.909
73 R -0.854
74 Q 1.124
75 R -0.011
76 G 0.769
77 L -0.481
78 Q -1.355
79 D -0.638
80 V 0.118
81 R -1.414
82 P 0.420
83 I -0.201
84 G 0.113
85 E -0.138
86 D 0.097
87 E -0.072
88 V 0.599
89 F 2.450
90 L 0.100
91 D 1.899
92 S -0.444
93 V 0.723
94 C -0.695
95 L -0.404
96 L 1.205
97 N -0.793
98 P -0.948
99 N -0.712
100 V -0.436
101 S -1.264
102 S 0.414
103 E 1.113
104 L -0.046
105 D 1.120
106 V 0.648
107 I 0.538
108 N 1.245
109 T -1.276
110 N -0.691
111 D -0.142
112 V 0.482
113 E 0.409
114 V 0.801
115 L -0.847
116 D 1.440
117 E -0.244
118 C -0.645
119 L 1.393
120 A -0.071
121 E -0.230
122 Y 0.514
123 C 0.297
124 T 1.890
125 S 1.073
126 L -0.410
127 R -0.704
128 T -0.050
129 S -0.734
130 P -0.277
131 G 0.517
132 V 0.756
133 L -0.243
134 I 0.829
135 S -0.013
136 G -0.120
137 L 0.788
138 R -0.303
139 V 0.209
140 R -0.687
141 A -0.502
142 Q -0.629
143 D -0.087
144 R -0.074
145 I 0.829
146 I 1.845
147 E -0.012
148 L 1.490
149 F 0.256
150 E -0.691
151 H -1.176
152 P 3.077
153 T -0.630
154 I 0.484
155 V 0.211
156 N 0.910
157 V -0.483
158 S -0.674
159 S 1.223
160 H -0.141
161 F 0.647
162 V -0.657
163 Y 2.450
164 T -0.728
165 P 0.218
166 S 0.044
167 P -0.410
168 Y -1.371
169 V 0.312
170 F 1.701
171 A -0.544
172 L 2.450
173 A 0.016
174 Q 0.529
175 A 1.148
176 H -0.412
177 L 1.638
178 P -1.196
179 R -0.553
180 L 1.222
181 P 3.077
182 S -0.955
183 S 0.262
184 L 1.452
185 E -1.195
186 A -1.296
187 L 0.562
188 V -0.191
189 S -0.777
190 G 1.246
191 L 1.787
192 F 1.890
193 D 0.161
194 G -0.016
195 I 0.383
196 P 0.812
197 A -0.618
198 P -0.649
199 R 0.369
200 Q -1.240
201 P 0.041
202 L -0.005
203 D -0.712
204 A -0.992
205 H -1.005
206 N -1.065
207 P -0.888
208 R -0.513
209 T 1.746
210 D 0.113
211 V 1.408
212 V 0.955
213 I 1.397
214 T 1.238
215 G 0.408
216 R -0.996
217 R 1.052
218 A 0.446
219 P -0.324
220 R -1.292
221 P -0.274
222 I -0.231
223 A -0.079
224 G -0.052
225 S -0.816
226 G -0.691
227 A -1.115
228 G -0.599
229 S -1.543
230 G -0.589
231 G -1.404
232 A -0.572
233 G -0.569
234 A -0.604
235 K 1.408
236 R -0.157
237 A 0.210
238 T 0.070
239 V 0.148
240 S 1.450
241 E -0.401
242 F 1.235
243 V 3.077
244 Q 1.881
245 V 2.076
246 K 1.434
247 H -0.136
248 I 2.445
249 D 1.200
250 R 0.589
251 V 0.505
252 G -0.767
253 P -0.204
254 A 0.090
255 G -0.316
256 V -0.706
257 S -0.730
258 P -0.738
259 A -1.000 *
260 P -1.000 *
261 P -1.000 *
262 P -1.000 *
263 N -1.000 *
264 N -1.000 *
265 T -1.000 *
266 D -1.000 *
267 S -1.000 *
268 S -0.294
269 S -0.300
270 L -0.589
271 V -0.321
272 P -0.436
273 G -0.759
274 A -0.628
275 Q -0.840
276 D -0.948
277 S -1.291
278 A -1.251
279 P -0.435
280 P -0.562
281 G -1.184
282 P -0.441
283 T 0.270
284 L 0.736
285 R -1.111
286 E -0.883
287 L 1.688
288 W -0.316
289 W -0.776
290 V -0.133
291 F 0.209
292 Y -1.399
293 A -1.326
294 A 0.063
295 D 1.898
296 R -0.904
297 A 1.115
298 L -0.131
299 E -1.320
300 E -0.964
301 P -0.987
302 R -1.302
303 A -0.459
304 D -0.969
305 S -1.240
306 G 0.353
307 L 1.002
308 T -0.161
309 R -0.832
310 E -0.521
311 E -0.039
312 V -0.619
313 R -1.669
314 A -0.236
315 V 0.285
316 R -0.861
317 G -1.213
318 F -0.088
319 R -0.996
320 E -1.297
321 Q 0.131
322 A 0.277
323 W -1.442
324 K -0.785
325 L 0.242
326 F 0.462
327 G 1.010
328 S -1.061
329 A -1.433
330 G -0.858
331 A -0.691
332 P 0.463
333 R 0.335
334 A -1.099
335 F 1.362
336 I -0.439
337 G 1.230
338 A -0.797
339 A -0.627
340 L -1.450
341 G -0.692
342 L 0.219
343 S 0.414
344 P -0.488
345 L -0.668
346 Q 1.440
347 K 0.724
348 L 0.745
349 A 0.786
350 V 0.406
351 Y -0.320
352 Y 1.327
353 Y 1.044
354 I 0.622
355 I -0.303
356 H -1.389
357 R 0.850
358 E -0.481
359 R -0.263
360 R 0.046
361 L -1.045
362 S 0.030
363 P 0.092
364 F 1.838
365 P -0.205
366 A -0.868
367 L 1.458
368 V 0.240
369 R -1.102
370 L 0.918
371 V -0.071
372 G -1.236
373 R -0.409
374 Y 0.391
375 T -0.596
376 Q -0.801
377 R -1.389
378 H -0.964
379 G -0.515
380 L -1.320
381 Y -1.283
382 V -1.047
383 P -0.242
384 R -0.688
385 P -0.722
386 D -0.395
387 D 0.206
388 P -1.338
389 V -0.163
390 L 0.461
391 A 0.335
392 D 1.078
393 A -0.430
394 I 0.161
395 N 1.899
396 G -0.646
397 L 0.664
398 F 0.594
399 R 1.000
400 D -0.179
401 A 0.217
402 L -0.438
403 A -0.239
404 A -0.258
405 G 0.828
406 T -1.473
407 T -0.370
408 A -0.131
409 E 0.847
410 Q -1.073
411 L 0.248
412 L -0.147
413 M -1.003
414 F -0.941
415 D -1.364
416 L -0.650
417 L -1.106
418 P -0.828
419 P -0.618
420 K -0.912
421 D -1.563
422 V -1.316
423 P -0.837
424 V -1.067
425 G -0.843
426 S -1.258
427 D -0.739
428 V -0.686
429 Q -0.950
430 A -1.092
431 D 0.431
432 S -0.366
433 T -0.256
434 A -0.636
435 L 0.661
436 L 0.350
437 R -0.656
438 F -0.894
439 I -0.568
440 E -1.134
441 S -1.023
442 Q -1.446
443 R -0.708
444 L -1.544
445 A -1.361
446 V -0.726
447 P -0.543
448 G -1.285
449 G -1.078
450 V -1.107
451 I -0.874
452 S -0.754
453 P -0.695
454 E -0.693
455 H -0.402
456 V -0.101
457 A -1.401
458 Y -0.798
459 L -0.224
460 G 0.225
461 A -0.640
462 F -0.277
463 L 0.736
464 S -0.679
465 V -1.464
466 L 1.379
467 Y 1.698
468 A 0.032
469 G 0.806
470 R -0.822
471 G 0.462
472 R -0.269
473 M -1.296
474 S -0.818
475 A -0.039
476 A 0.924
477 T -0.972
478 H -1.153
479 T -0.053
480 A 0.407
481 R 0.386
482 L -1.102
483 T -0.230
484 G -0.048
485 V -0.697
486 T 0.098
487 S -0.691
488 L 0.510
489 V -0.374
490 L -1.252
491 A -0.226
492 V -0.103
493 G -0.575
494 D 0.349
495 V -0.424
496 D -0.901
497 R -0.905
498 L -0.729
499 S 1.024
500 A 1.877
501 F 1.702
502 D 1.836
503 R -0.342
504 G -0.397
505 A -0.516
506 A -0.949
507 G -0.433
508 A -0.362
509 A -0.583
510 S -0.526
511 R -0.497
512 T -0.428
513 R 0.841
514 A -0.875
515 A 0.403
516 G -1.105
517 Y 0.233
518 L 1.572
519 D -1.171
520 V -0.153
521 L 1.653
522 L 0.635
523 T -0.186
524 V -0.935
525 R 1.081
526 L 0.752
527 A -0.731
528 R -0.678
529 S 0.443
530 Q -1.000 *
531 H -1.000 *
532 G -1.000 *
533 Q -1.000 *
534 S -1.000 *
535 V -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 331.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MELSYATTMH YRDVVFYVTT DRNRAYFVCG GCVYSVGRPC ASQPGEIAKF GLVVRGTGPD
70 80 90 100 110 120
DRVVANYVRS ELRQRGLQDV RPIGEDEVFL DSVCLLNPNV SSELDVINTN DVEVLDECLA
130 140 150 160 170 180
EYCTSLRTSP GVLISGLRVR AQDRIIELFE HPTIVNVSSH FVYTPSPYVF ALAQAHLPRL
190 200 210 220 230 240
PSSLEALVSG LFDGIPAPRQ PLDAHNPRTD VVITGRRAPR PIAGSGAGSG GAGAKRATVS
250 260 270 280 290 300
EFVQVKHIDR VGPAGVSPAP PPNNTDSSSL VPGAQDSAPP GPTLRELWWV FYAADRALEE
310 320 330 340 350 360
PRADSGLTRE EVRAVRGFRE QAWKLFGSAG APRAFIGAAL GLSPLQKLAV YYYIIHRERR
370 380 390 400 410 420
LSPFPALVRL VGRYTQRHGL YVPRPDDPVL ADAINGLFRD ALAAGTTAEQ LLMFDLLPPK
430 440 450 460 470 480
DVPVGSDVQA DSTALLRFIE SQRLAVPGGV ISPEHVAYLG AFLSVLYAGR GRMSAATHTA
490 500 510 520 530
RLTGVTSLVL AVGDVDRLSA FDRGAAGAAS RTRAAGYLDV LLTVRLARSQ HGQSV
4U4H (X-Ray,2.05 Å resolution)
5ED7 (X-Ray,2.72 Å resolution)
Funk et al. found this HSV tegument protein to have nuclear export activity using Nuclear EXport Trapped by RAPamycin (NEX-TRAP). X-ray structure shows NES in an alpha-helical domain with hydrophobic residues inaccessible, which suggests that the domain has to unfold for CRM1 binding.
[1]. "Comprehensive analysis of nuclear export of herpes simplex virus type 1 tegument proteins and their Epstein-Barr virus orthologs"
Funk C, Raschbichler V, Lieber D, Wetschky J, Arnold EK, Leimser J, Biggel M, Friedel CC, Ruzsics Z, Bailer SM. (2019)
Traffic,
20:152-167
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.