Summary for E1B-55K (NES ID: 34)
Full Name
E1B protein, large T-antigen
UniProt
Alternative Names
E1B 55 kDa protein
Organism
Human adenovirus C serotype 5 (HAdV-5) (Human adenovirus 5)
Experimental Evidence for CRM1-mediated Export
Mutations That Affect Nuclear Export
Mutations That Affect CRM1 Binding
Unknown
Functional Export Signals
Secondary Structure of Export Signal
Unknown
Other Residues Important for Export
Unknown
Sequence
Show FASTA Format
>gi|119030|sp|P03243.1|E1BL_ADE05 RecName: Full=E1B protein, large T-antigen; AltName: Full=E1B 55 kDa protein; Short=E1B-55K
MERRNPSERGVPAGFSGHASVESGCETQESPATVVFRPPGDNTDGGAAAAAGGSQAAAAGAEPMEPESRP
GPSGMNVVQVAELYPELRRILTITEDGQGLKGVKRERGACEATEEARNLAFSLMTRHRPECITFQQIKDN
CANELDLLAQKYSIEQLTTYWLQPGDDFEEAIRVYAKVALRPDCKYKISKLVNIRNCCYISGNGAEVEID
TEDRVAFRCSMINMWPGVLGMDGVVIMNVRFTGPNFSGTVFLANTNLILHGVSFYGFNNTCVEAWTDVRV
RGCAFYCCWKGVVCRPKSRASIKKCLFERCTLGILSEGNSRVRHNVASDCGCFMLVKSVAVIKHNMVCGN
CEDRASQMLTCSDGNCHLLKTIHVASHSRKAWPVFEHNILTRCSLHLGNRRGVFLPYQCNLSHTKILLEP
ESMSKVNLNGVFDMTMKIWKVLRYDETRTRCRPCECGGKHIRNQPVMLDVTEELRPDHLVLACTRAEFGS
SDEDTD
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 999999988878878888544466657678752134799999999987567999887899
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: MERRNPSERGVPAGFSGHASVESGCETQESPATVVFRPPGDNTDGGAAAAAGGSQAAAAG
10 20 30 40 50 60
Conf: 999998889999898732124456101101422115788887543246430036787744
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH
AA: AEPMEPESRPGPSGMNVVQVAELYPELRRILTITEDGQGLKGVKRERGACEATEEARNLA
70 80 90 100 110 120
Conf: 400135899813289999986302232111233013479981898999899963152896
Pred: HHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCEEEE
AA: FSLMTRHRPECITFQQIKDNCANELDLLAQKYSIEQLTTYWLQPGDDFEEAIRVYAKVAL
130 140 150 160 170 180
Conf: 489659996447634415999097699992389214999711576134301442998789
Pred: CCCCEEEEEEEEEECCCEEEEECCEEEEEECCCCEEEEEEECCCCCEEEECCCEEEEEEE
AA: RPDCKYKISKLVNIRNCCYISGNGAEVEIDTEDRVAFRCSMINMWPGVLGMDGVVIMNVR
190 200 210 220 230 240
Conf: 946996137999233069994699467642588613818940266434775430686059
Pred: EECCCCCEEEEEECCEEEEEEEEEECCCCCEEEEECCEEEEEEEEEEEEEEEEECCCCEE
AA: FTGPNFSGTVFLANTNLILHGVSFYGFNNTCVEAWTDVRVRGCAFYCCWKGVVCRPKSRA
250 260 270 280 290 300
Conf: 962203051158898506447860212572148998021489622992569888883377
Pred: EEECCCCCCEEEEEEEECCEEEECCCCCCCCEEEEEECEEEEEEEEEECCCCCCCCCEEE
AA: SIKKCLFERCTLGILSEGNSRVRHNVASDCGCFMLVKSVAVIKHNMVCGNCEDRASQMLT
310 320 330 340 350 360
Conf: 179916850368983689999971312147678676302012134445554226786668
Pred: CCCCCEEEEEEEEEECCCCCCCCEEECCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECC
AA: CSDGNCHLLKTIHVASHSRKAWPVFEHNILTRCSLHLGNRRGVFLPYQCNLSHTKILLEP
370 380 390 400 410 420
Conf: 940025863565086049999740588761552002898754554798721554369410
Pred: CCCEEEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCEE
AA: ESMSKVNLNGVFDMTMKIWKVLRYDETRTRCRPCECGGKHIRNQPVMLDVTEELRPDHLV
430 440 450 460 470 480
Conf: 0010122049998789
Pred: EEECCEEECCCCCCCC
AA: LACTRAEFGSSDEDTD
490
Show Conservation Score by AL2CO
1 M 2.827
2 E 1.848
3 R 0.159
4 R -0.182
5 N -0.142
6 P 1.087
7 S -0.204
8 E 0.942
9 R -0.453
10 G 2.827
11 V 1.035
12 P 0.573
13 A 0.173
14 G 2.827
15 F 1.690
16 S 0.194
17 G -0.204
18 H -0.451
19 A 0.139
20 S -0.185
21 V 1.926
22 E 1.933
23 S 0.104
24 G -0.672
25 C -0.437
26 E -0.680
27 T -0.436
28 Q 0.453
29 E 0.143
30 S -1.000 *
31 P -1.000 *
32 A -1.000 *
33 T -1.000 *
34 V -1.000 *
35 V -1.000 *
36 F -1.000 *
37 R -1.000 *
38 P -1.000 *
39 P -1.000 *
40 G -0.640
41 D -1.273
42 N -0.648
43 T -0.900
44 D -0.692
45 G -0.462
46 G -0.846
47 A -0.216
48 A -0.652
49 A -0.407
50 A -1.253
51 A -0.381
52 G -0.793
53 G -0.435
54 S -0.369
55 Q -0.169
56 A -0.289
57 A -0.656
58 A -1.004
59 A -0.343
60 G 1.139
61 A -0.374
62 E -0.652
63 P -0.309
64 M -0.130
65 E -0.279
66 P -0.380
67 E 0.293
68 S -0.188
69 R 0.223
70 P -0.060
71 G 0.761
72 P -1.000 *
73 S -0.562
74 G 0.296
75 M -0.337
76 N -1.000 *
77 V -1.000 *
78 V -1.000 *
79 Q -1.000 *
80 V -1.000 *
81 A 0.179
82 E 0.267
83 L 0.638
84 Y 0.112
85 P 0.850
86 E 0.468
87 L -0.045
88 R -0.696
89 R -0.848
90 I -0.653
91 L -1.000 *
92 T -1.000 *
93 I -1.000 *
94 T -1.000 *
95 E -1.070
96 D -0.912
97 G -1.199
98 Q -1.370
99 G -0.703
100 L -1.045
101 K -0.002
102 G -0.173
103 V -1.144
104 K 0.046
105 R 0.353
106 E -0.420
107 R 0.062
108 G -1.209
109 A -0.809
110 C -1.188
111 E -0.545
112 A -1.010
113 T -1.382
114 E -0.870
115 E -1.386
116 A -0.392
117 R -0.403
118 N -0.116
119 L 0.756
120 A 0.316
121 F -0.375
122 S 0.274
123 L 0.014
124 M 0.298
125 T -0.317
126 R 0.782
127 H -0.718
128 R 0.698
129 P 0.038
130 E 0.343
131 C -0.993
132 I 0.839
133 T -0.544
134 F 0.612
135 Q -0.751
136 Q 0.370
137 I 0.940
138 K -0.622
139 D -1.134
140 N -0.348
141 C -0.233
142 A -1.149
143 N -0.771
144 E -0.053
145 L -0.902
146 D -0.480
147 L -0.824
148 L -0.331
149 A -0.752
150 Q -0.240
151 K 0.056
152 Y 0.093
153 S -0.579
154 I 1.360
155 E 1.654
156 Q -0.591
157 L 0.938
158 T -0.255
159 T 0.179
160 Y 0.317
161 W -0.913
162 L -0.027
163 Q -0.818
164 P 1.313
165 G 0.200
166 D 1.632
167 D 1.972
168 F 0.328
169 E 0.488
170 E -0.945
171 A -0.042
172 I 0.965
173 R -0.283
174 V -0.997
175 Y 1.065
176 A 0.839
177 K 2.827
178 V 1.071
179 A 0.133
180 L 2.827
181 R -0.659
182 P 2.170
183 D -0.179
184 C -0.991
185 K -0.993
186 Y 2.827
187 K -0.927
188 I 0.970
189 S -0.506
190 K -0.668
191 L -0.468
192 V 0.688
193 N -1.223
194 I 1.213
195 R -0.321
196 N -0.538
197 C -0.732
198 C 0.827
199 Y 2.827
200 I 1.198
201 S 0.812
202 G 2.827
203 N 1.252
204 G 1.375
205 A 2.827
206 E -0.350
207 V 1.027
208 E -0.410
209 I -0.132
210 D -1.416
211 T -0.732
212 E -1.313
213 D -0.964
214 R -0.479
215 V -0.996
216 A 0.418
217 F 1.246
218 R -0.870
219 C -0.007
220 S -1.317
221 M -0.772
222 I -0.581
223 N -0.600
224 M -0.850
225 W -0.714
226 P 1.690
227 G -0.487
228 V 0.845
229 L -0.770
230 G 0.210
231 M 1.303
232 D -1.149
233 G -0.047
234 V 0.633
235 V 0.557
236 I 1.368
237 M -1.338
238 N 0.397
239 V 0.290
240 R -0.031
241 F 2.142
242 T -1.062
243 G -0.474
244 P -0.857
245 N -0.654
246 F -1.418
247 S -1.335
248 G 0.332
249 T -0.660
250 V 0.204
251 F 0.726
252 L -1.634
253 A -0.316
254 N -0.600
255 T 0.151
256 N -1.339
257 L -0.603
258 I -0.300
259 L 0.255
260 H 0.777
261 G 0.884
262 V 1.814
263 S -0.831
264 F 2.827
265 Y -0.441
266 G 0.878
267 F -0.478
268 N -0.801
269 N 0.105
270 T -0.537
271 C 0.856
272 V 0.616
273 E -0.513
274 A -0.809
275 W -0.935
276 T -0.701
277 D -0.688
278 V -0.135
279 R -0.873
280 V 0.648
281 R 1.094
282 G 2.827
283 C 1.696
284 A -0.956
285 F 2.827
286 Y -0.782
287 C -0.353
288 C 0.576
289 W -0.339
290 K -0.268
291 G 0.680
292 V 0.319
293 V -1.135
294 C -0.670
295 R -0.550
296 P -0.900
297 K -0.326
298 S -0.557
299 R -1.535
300 A -0.230
301 S -0.065
302 I 1.348
303 K 0.099
304 K -0.816
305 C 1.442
306 L -0.734
307 F 1.642
308 E 0.517
309 R 0.243
310 C 1.670
311 T -0.915
312 L -0.125
313 G 1.204
314 I 0.640
315 L -0.992
316 S -0.296
317 E -0.939
318 G 1.277
319 N -1.307
320 S -0.725
321 R -0.972
322 V 0.091
323 R 0.252
324 H -0.399
325 N 1.116
326 V -0.825
327 A 0.130
328 S -0.702
329 D 0.575
330 C 0.234
331 G -1.355
332 C 2.191
333 F 0.495
334 M -0.364
335 L -1.059
336 V -0.077
337 K -0.422
338 S 0.094
339 V -1.137
340 A 1.699
341 V -0.799
342 I 0.565
343 K -0.815
344 H 0.226
345 N 0.538
346 M -0.367
347 V 0.997
348 C -1.148
349 G -0.920
350 N -1.297
351 C -0.988
352 E -1.085
353 D -0.969
354 R -1.276
355 A -0.923
356 S -1.487
357 Q -0.748
358 M 0.501
359 L 0.230
360 T 0.796
361 C 2.827
362 S -0.711
363 D -0.243
364 G 0.317
365 N -1.474
366 C -0.539
367 H -0.724
368 L -0.354
369 L 2.827
370 K -0.460
371 T -0.407
372 I 0.405
373 H 2.827
374 V 1.150
375 A -0.134
376 S -0.192
377 H 0.058
378 S -0.497
379 R -0.228
380 K -0.979
381 A -1.090
382 W 0.858
383 P 2.201
384 V -0.729
385 F 0.517
386 E -1.086
387 H -0.311
388 N 1.488
389 I -0.299
390 L 0.403
391 T -0.639
392 R 0.278
393 C -0.154
394 S -0.585
395 L 0.489
396 H 0.963
397 L 0.544
398 G 2.827
399 N -1.273
400 R 2.827
401 R -0.090
402 G 2.209
403 V -0.605
404 F 0.297
405 L -1.139
406 P 0.599
407 Y -1.122
408 Q -0.177
409 C 0.603
410 N -0.485
411 L 0.438
412 S -0.851
413 H -0.867
414 T 0.495
415 K -0.600
416 I 0.296
417 L -0.716
418 L 0.283
419 E 0.340
420 P -0.960
421 E -0.638
422 S 0.097
423 M -0.266
424 S -0.592
425 K 0.041
426 V 0.317
427 N -0.278
428 L 0.233
429 N -0.301
430 G -0.471
431 V -0.619
432 F 1.223
433 D -0.409
434 M -1.169
435 T 0.258
436 M -0.755
437 K -1.019
438 I 0.077
439 W -0.730
440 K 0.757
441 V 0.327
442 L -0.198
443 R -0.420
444 Y -0.738
445 D 0.338
446 E -0.153
447 T -1.052
448 R -0.906
449 T -0.893
450 R -0.163
451 C -0.643
452 R 0.509
453 P -0.974
454 C 2.827
455 E -0.301
456 C 2.827
457 G 2.208
458 G -1.112
459 K -0.088
460 H 2.827
461 I -1.576
462 R -0.984
463 N -1.100
464 Q -1.307
465 P -0.517
466 V -1.120
467 M -0.685
468 L -0.312
469 D -0.989
470 V -0.156
471 T 0.672
472 E -0.003
473 E -0.510
474 L -0.211
475 R 0.582
476 P -0.311
477 D 1.233
478 H 0.929
479 L -1.191
480 V -1.053
481 L -0.810
482 A 0.661
483 C -0.369
484 T -0.024
485 R -0.622
486 A -0.091
487 E 0.920
488 F 1.172
489 G -0.622
490 S 1.241
491 S 1.640
492 D 0.727
493 E 1.685
494 D 1.202
495 T -0.166
496 D -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 34.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MERRNPSERG VPAGFSGHAS VESGCETQES PATVVFRPPG DNTDGGAAAA AGGSQAAAAG
70 80 90 100 110 120
AEPMEPESRP GPSGMNVVQV AELYPELRRI LTITEDGQGL KGVKRERGAC EATEEARNLA
130 140 150 160 170 180
FSLMTRHRPE CITFQQIKDN CANELDLLAQ KYSIEQLTTY WLQPGDDFEE AIRVYAKVAL
190 200 210 220 230 240
RPDCKYKISK LVNIRNCCYI SGNGAEVEID TEDRVAFRCS MINMWPGVLG MDGVVIMNVR
250 260 270 280 290 300
FTGPNFSGTV FLANTNLILH GVSFYGFNNT CVEAWTDVRV RGCAFYCCWK GVVCRPKSRA
310 320 330 340 350 360
SIKKCLFERC TLGILSEGNS RVRHNVASDC GCFMLVKSVA VIKHNMVCGN CEDRASQMLT
370 380 390 400 410 420
CSDGNCHLLK TIHVASHSRK AWPVFEHNIL TRCSLHLGNR RGVFLPYQCN LSHTKILLEP
430 440 450 460 470 480
ESMSKVNLNG VFDMTMKIWK VLRYDETRTR CRPCECGGKH IRNQPVMLDV TEELRPDHLV
490
LACTRAEFGS SDEDTD
3D Structures in PDB
Not Available
Comments
E1B-55K in human adenoviruses promote viral replication by modulating nucleo-cytoplasmic mRNA export. Kräzer et al. studied the trafficking of E1B-55K and found that when transiently expressed, E1B-55K is predominantly cytoplasmic. Following LMB (or p21Rex-BFP) treatment, E1B-55K rapidly accumulate in the nucleus, independently of E4orf6, p53, or Mdm2. Sequence analysis suggested that aa 364-496 has a NLS, while a NES resides between aa 1-163. Fusion protein GST-E1B(83-93)-GFP was efficiently exported after microinjection, indicating that it is a functional NES. Triple mutations L83/L87/L91 to alanines abolishes export of both GST-E1B(83-93)-GFP, and the full-length protein. They also showed that overexpression of HIV-Rev or HTLV-Rex resulted in nuclear accumulation of E1B-55K, indicating that the retroviral proteins have a higher affinity for CRM1.
References
[1]. "The adenovirus type 5 E1B-55K oncoprotein is a highly active shuttle protein and shuttling is independent of E4orf6, p53 and Mdm2"
Krätzer, F., Rosorius, O., Heger, P., Hirschmann, N., Dobner, T., Hauber, J., Stauber, R.H.. (2000)
Oncogene,
19:850-857
PubMed
User Input
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