COP9 signalosome complex subunit 5
UniProt
Show FASTA Format
>gi|55976214|sp|O35864.3|CSN5_MOUSE RecName: Full=COP9 signalosome complex subunit 5; Short=SGN5; Short=Signalosome subunit 5; AltName: Full=Jun activation domain-binding protein 1; AltName: Full=Kip1 C-terminus-interacting protein 2
MAASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHAR
SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSH
PGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK
IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQL
GRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINVA
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 998871278884312259886785433465699989999963999989885100000198
Pred: CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHH
AA: MAASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISAL
10 20 30 40 50 60
Conf: 999999632279960113201504529818999521367677424895020689999999
Pred: HHHHHHHHHHCCCCCEEEECCCEEEECCEEEEEEEECCCCCCCEEEEEECHHHHHHHHHH
AA: ALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAY
70 80 90 100 110 120
Conf: 999998099342011114689744323464303468754206994899938765421450
Pred: HHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCC
AA: IENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGK
130 140 150 160 170 180
Conf: 475310148999989999999778889123665202578601013236418268999999
Pred: EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHH
AA: VNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLEL
190 200 210 220 230 240
Conf: 733342101368830010233544899899999999987266764467642235654678
Pred: HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
AA: LWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKL
250 260 270 280 290 300
Conf: 8884435698999998799999999972067899
Pred: HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AA: AKATRDSCKTTIEAIHGLMSQVIKDKLFNQINVA
310 320 330
Show Conservation Score by AL2CO
1 M -1.000 *
2 A -1.000 *
3 A -1.000 *
4 S -1.000 *
5 G -1.000 *
6 S -1.000 *
7 G -1.000 *
8 M -1.000 *
9 A -1.000 *
10 Q -1.000 *
11 K -1.000 *
12 T -1.000 *
13 W -1.000 *
14 E -1.000 *
15 L -1.000 *
16 A -1.000 *
17 N -1.000 *
18 N -1.000 *
19 M -1.000 *
20 Q -1.000 *
21 E -1.000 *
22 A -1.000 *
23 Q -1.000 *
24 S -1.000 *
25 I -1.000 *
26 D -1.000 *
27 E -1.000 *
28 I -1.000 *
29 Y -1.000 *
30 K -1.000 *
31 Y -1.000 *
32 D -1.000 *
33 K -1.000 *
34 K -0.440
35 Q -0.431
36 Q -0.592
37 Q -0.316
38 E -0.562
39 I -0.438
40 L -0.833
41 A -0.727
42 A -0.487
43 K -0.496
44 P 0.237
45 W -0.509
46 T -0.469
47 K -0.647
48 D -0.330
49 H -0.537
50 H -0.573
51 Y -0.242
52 F 0.329
53 K 0.236
54 Y -0.696
55 C 1.286
56 K -0.500
57 I 1.807
58 S 1.032
59 A -0.410
60 L -0.136
61 A 2.299
62 L 0.342
63 L 0.094
64 K 1.730
65 M 1.444
66 V 0.612
67 M -0.651
68 H 3.033
69 A 0.985
70 R -0.694
71 S -0.274
72 G 1.273
73 G -0.688
74 N -0.262
75 L -0.759
76 E 1.575
77 V 2.943
78 M 1.074
79 G 4.542
80 L 0.589
81 M 1.356
82 L 0.257
83 G 4.209
84 K -0.257
85 V -0.002
86 D -0.740
87 G -0.489
88 E -0.683
89 T -0.644
90 M 0.922
91 I -0.660
92 I 1.920
93 M -0.472
94 D 1.163
95 S 0.889
96 F 0.867
97 A 0.076
98 L 0.746
99 P 0.527
100 V 0.676
101 E -0.604
102 G 0.431
103 T 0.259
104 E 0.723
105 T 0.344
106 R 0.085
107 V 0.682
108 N -0.266
109 A 0.131
110 Q -0.393
111 A -0.287
112 A -0.065
113 A -0.092
114 Y -0.495
115 E 0.048
116 Y 1.284
117 M 0.536
118 A -0.185
119 A -0.388
120 Y 0.226
121 I -0.592
122 E -0.062
123 N -0.831
124 A -0.637
125 K -0.223
126 Q -0.715
127 V -0.232
128 G -0.240
129 R -0.784
130 L -1.059
131 E -0.201
132 N -0.795
133 A 0.222
134 I 1.154
135 G 2.706
136 W 2.673
137 Y 2.207
138 H 1.899
139 S 3.559
140 H 1.997
141 P 1.409
142 G 0.224
143 Y 0.750
144 G 0.504
145 C 0.808
146 W 0.895
147 L 0.814
148 S 2.339
149 G -0.489
150 I 0.346
151 D 2.166
152 V 0.561
153 S -0.478
154 T 1.512
155 Q 1.424
156 M -0.829
157 L -0.263
158 N 0.354
159 Q 2.421
160 Q -0.363
161 F -0.394
162 Q -0.428
163 E -0.229
164 P 0.328
165 F 0.346
166 V 1.427
167 A 1.185
168 V 2.132
169 V 2.103
170 I 1.009
171 D 3.019
172 P 0.905
173 T -0.556
174 R 0.657
175 T 2.090
176 I -0.506
177 S 0.111
178 A -0.466
179 G 0.254
180 K -0.271
181 V 0.823
182 N -0.587
183 L 1.220
184 G 0.473
185 A 0.870
186 F 2.015
187 R 2.129
188 T 1.044
189 Y -0.095
190 P -0.340
191 K -0.681
192 G -0.655
193 Y -0.800
194 K -0.785
195 P -0.695
196 P -0.627
197 D -0.717
198 E -0.748
199 G -0.651
200 P -0.846
201 S -0.822
202 E -0.707
203 Y -0.931
204 Q -0.757
205 T -0.738
206 I -0.576
207 P -0.331
208 L -0.773
209 N -0.482
210 K -0.848
211 I -0.052
212 E -0.470
213 D -0.630
214 F -0.713
215 G -0.363
216 V -0.559
217 H -0.443
218 C -0.640
219 K -0.470
220 Q -0.688
221 Y 1.134
222 Y 0.135
223 A -0.092
224 L 1.097
225 E -0.655
226 V 0.416
227 S -0.534
228 Y -0.120
229 F -0.364
230 K -0.646
231 S 0.026
232 S -0.739
233 L -0.884
234 D 0.502
235 R -0.747
236 K -0.862
237 L 0.826
238 L 0.458
239 E -0.670
240 L -1.052
241 L 1.301
242 W -1.007
243 N -0.166
244 K -0.367
245 Y -0.741
246 W -0.591
247 V -0.881
248 N -0.645
249 T -0.710
250 L 0.624
251 S -0.747
252 S -0.417
253 S -0.868
254 S -0.605
255 L -0.728
256 L -0.862
257 T -0.503
258 N -0.978
259 A -1.000
260 D -0.684
261 Y -0.919
262 T -0.905
263 T -0.892
264 G -0.614
265 Q -0.583
266 V 0.316
267 F -1.059
268 D -0.399
269 L -0.156
270 S -0.948
271 E -0.815
272 K -0.603
273 L -0.364
274 E -0.825
275 Q -0.722
276 S -0.763
277 E -0.968
278 A -0.932
279 Q -0.919
280 L -0.648
281 G -0.920
282 R -0.734
283 G -0.958
284 S -0.958
285 F -1.056
286 M -1.159
287 L -0.825
288 G -1.108
289 L -1.121
290 E -0.993
291 T -0.919
292 H -0.966
293 D -0.609
294 R -0.770
295 K -0.733
296 S -0.969
297 E -0.700
298 D -0.665
299 K -0.593
300 L -0.452
301 A -0.878
302 K -0.232
303 A -0.627
304 T -0.623
305 R -0.670
306 D 0.022
307 S -0.037
308 C -0.868
309 K -0.262
310 T -0.196
311 T -0.187
312 I -0.811
313 E -0.186
314 A -0.619
315 I -0.404
316 H -0.840
317 G -0.063
318 L -0.291
319 M 0.049
320 S -0.129
321 Q -0.607
322 V -0.789
323 I 0.894
324 K 0.303
325 D -0.328
326 K -0.818
327 L 1.744
328 F 1.102
329 N -1.000 *
330 Q -1.000 *
331 I -1.000 *
332 N -1.000 *
333 V -1.000 *
334 A -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 35.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MAASGSGMAQ KTWELANNMQ EAQSIDEIYK YDKKQQQEIL AAKPWTKDHH YFKYCKISAL
70 80 90 100 110 120
ALLKMVMHAR SGGNLEVMGL MLGKVDGETM IIMDSFALPV EGTETRVNAQ AAAYEYMAAY
130 140 150 160 170 180
IENAKQVGRL ENAIGWYHSH PGYGCWLSGI DVSTQMLNQQ FQEPFVAVVI DPTRTISAGK
190 200 210 220 230 240
VNLGAFRTYP KGYKPPDEGP SEYQTIPLNK IEDFGVHCKQ YYALEVSYFK SSLDRKLLEL
250 260 270 280 290 300
LWNKYWVNTL SSSSLLTNAD YTTGQVFDLS EKLEQSEAQL GRGSFMLGLE THDRKSEDKL
310 320 330
AKATRDSCKT TIEAIHGLMS QVIKDKLFNQ INVA
Jab1/CSN5 is the fifth component of the COP9 signalosome (CSN) complex. Jab1/CSN5 down-regulate p27Kip1 by directly interact with p27, which was exported to the cytoplasm and induced to be degraded. LMB treatment prevents p27 breakdown, indicating nuclear export plays an important role. Tomoda et al. found that it is Jab1/CSN5 that interacts with CRM1 in vitro binding assays in LMB sensitive manner, and aa 233-242 alone is sufficient for CRM1 binding. Mutations of L237/240/242 to alanines disrupt in vitro binding. However, aa 242-334 can still interact with CRM1. The effect of mutation within NES (233-242) in CRM1 binding is partial. PLEASE NOTE THAT THE FUNCTIONAL NES (233-242) IS ESTABLISHED BY CRM1 BINDING ASSAYS. They also carried out other experiments to show that the N-terminal half of Jab1/CSN5 can form intermediate complex with p27 in proliferating cells.
[1]. "The cytoplasmic shuttling and subsequent degradation of p27Kip1 mediated by Jab1/CSN5 and the COP9 signalosome complex"
Tomoda, K., Kubota, Y., Arata, Y., Mori, S., Maeda, M., Tanaka, T., Yoshida, M., Yoneda-Kato, N., Kato, J.Y. (2002)
J Biol Chem,
277:2302-2310
PubMed
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