Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like protein
Show FASTA Format
>tr|Q91855|Q91855_XENLA SUP35 protein (Fragment) OS=Xenopus laevis OX=8355 GN=SUP35 PE=1 SV=1
ITGTTLFPPTWEVLPTLPTPCLTPSAPLIKQLVYPNPTHPEMDASDSAPDSWEQADMEAT
EAQLNNSMAALNVNAKPFVPNVNAVEFVPSFLVGSAPSDGQEEEQQQQGSCTTVGMDVSE
PVVENGETEMSPEESWDHKEEPIEAEPGGGSEGDGGTTEEGTSEMMEEEEEIPKPKTIVV
PPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSW
ALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISA
RKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNDRYEECKEKLVPFL
KKVGFNPKKDIYFMPCSGLTGANLKEPVETCPWYIGLAFISYLDSLPNFNRSLDGPVRLP
IVDKYKDMGTVILGKLESGSICKGQQLAMMPNKHIVEVLSLLSDEVETELVAPGENLKLR
LKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEI
TALICMVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKT
IAIGKVLKLVPEKD
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 975544689521246898999999985212336789999998989999998522223313
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: ITGTTLFPPTWEVLPTLPTPCLTPSAPLIKQLVYPNPTHPEMDASDSAPDSWEQADMEAT
10 20 30 40 50 60
Conf: 001277432368899997778888766898888999999982000147987777888888
Pred: HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC
AA: EAQLNNSMAALNVNAKPFVPNVNAVEFVPSFLVGSAPSDGQEEEQQQQGSCTTVGMDVSE
70 80 90 100 110 120
Conf: 754589888898887788899876899999999999986676310000003889985358
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
AA: PVVENGETEMSPEESWDHKEEPIEAEPGGGSEGDGGTTEEGTSEMMEEEEEIPKPKTIVV
130 140 150 160 170 180
Conf: 999998743419999320478666585167872267403477768999751782257875
Pred: CCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEE
AA: PPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSW
190 200 210 220 230 240
Conf: 216997666079859971210014882455502899978756544431235668999961
Pred: ECCCCHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEC
AA: ALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISA
250 260 270 280 290 300
Conf: 455532255678850355466451496589999826898866788766999885211346
Pred: CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
AA: RKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNDRYEECKEKLVPFL
310 320 330 340 350 360
Conf: 621999888526885687568988899988989879802331027999887889955642
Pred: HHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEE
AA: KKVGFNPKKDIYFMPCSGLTGANLKEPVETCPWYIGLAFISYLDSLPNFNRSLDGPVRLP
370 380 390 400 410 420
Conf: 023347632169844201224408878862687338998530641002345678740477
Pred: CCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEE
AA: IVDKYKDMGTVILGKLESGSICKGQQLAMMPNKHIVEVLSLLSDEVETELVAPGENLKLR
430 440 450 460 470 480
Conf: 525444466688276189994000006675898743154333585036554300000203
Pred: ECCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEECHHHHHH
AA: LKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEI
490 500 510 520 530 540
Conf: 322112203358776899976446857999984134022013579887754133038934
Pred: HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCEEECCCCCE
AA: TALICMVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKT
550 560 570 580 590 600
Conf: 88844664113899
Pred: EEEEEEEEECCCCC
AA: IAIGKVLKLVPEKD
610
Show Conservation Score by AL2CO
1 I -1.000 *
2 T -1.000 *
3 G -1.000 *
4 T -1.000 *
5 T -1.000 *
6 L -1.000 *
7 F -1.000 *
8 P -1.000 *
9 P -1.000 *
10 T -1.000 *
11 W -1.000 *
12 E -1.000 *
13 V -1.000 *
14 L -1.000 *
15 P -1.000 *
16 T -1.000 *
17 L -1.000 *
18 P -1.000 *
19 T -1.000 *
20 P -1.000 *
21 C -1.000 *
22 L -1.000 *
23 T -1.000 *
24 P -1.000 *
25 S -1.000 *
26 A -1.000 *
27 P -1.000 *
28 L -1.000 *
29 I -1.000 *
30 K -1.000 *
31 Q -1.000 *
32 L -1.000 *
33 V -1.000 *
34 Y -1.000 *
35 P -1.000 *
36 N -1.000 *
37 P -1.000 *
38 T -1.000 *
39 H -1.000 *
40 P -1.000 *
41 E -1.000 *
42 M -1.000 *
43 D -1.000 *
44 A -1.000 *
45 S -1.000 *
46 D -1.000 *
47 S -1.000 *
48 A -1.000 *
49 P -1.000 *
50 D -1.000 *
51 S -1.000 *
52 W -1.000 *
53 E -1.000 *
54 Q -1.000 *
55 A -1.000 *
56 D -1.000 *
57 M -1.000 *
58 E -1.000 *
59 A -1.000 *
60 T -1.000 *
61 E -1.000 *
62 A -1.000 *
63 Q -1.000 *
64 L -1.000 *
65 N -1.000 *
66 N -1.000 *
67 S -1.000 *
68 M -1.000 *
69 A -1.000 *
70 A -1.000 *
71 L -1.000 *
72 N -1.000 *
73 V -1.000 *
74 N -1.000 *
75 A -1.000 *
76 K -1.000 *
77 P -1.000 *
78 F -1.000 *
79 V -1.000 *
80 P -1.000 *
81 N -1.000 *
82 V -1.000 *
83 N -1.000 *
84 A -1.000 *
85 V -1.000 *
86 E -1.000 *
87 F -1.000 *
88 V -1.000 *
89 P -1.000 *
90 S -1.000 *
91 F -1.000 *
92 L -1.000 *
93 V -1.000 *
94 G -1.000 *
95 S -1.000 *
96 A -1.000 *
97 P -1.000 *
98 S -1.000 *
99 D -1.000 *
100 G -1.000 *
101 Q -1.000 *
102 E -1.000 *
103 E -1.000 *
104 E -1.000 *
105 Q -1.000 *
106 Q -1.000 *
107 Q -1.000 *
108 Q -1.000 *
109 G -1.000 *
110 S -1.000 *
111 C -1.000 *
112 T -1.000 *
113 T -1.000 *
114 V -1.000 *
115 G -1.000 *
116 M -1.000 *
117 D -1.000 *
118 V -1.000 *
119 S -1.000 *
120 E -1.000 *
121 P -1.000 *
122 V -1.000 *
123 V -1.000 *
124 E -1.000 *
125 N -1.000 *
126 G -1.000 *
127 E -1.000 *
128 T -1.000 *
129 E -1.000 *
130 M -1.000 *
131 S -1.000 *
132 P -1.000 *
133 E -1.000 *
134 E -1.000 *
135 S -1.000 *
136 W -1.000 *
137 D -1.000 *
138 H -1.000 *
139 K -1.000 *
140 E -1.000 *
141 E -1.000 *
142 P -1.000 *
143 I -1.000 *
144 E -1.000 *
145 A -1.000 *
146 E -1.000 *
147 P -1.000 *
148 G -1.000 *
149 G -1.000 *
150 G -1.000 *
151 S -1.000 *
152 E -1.000 *
153 G -1.000 *
154 D -1.000 *
155 G -1.000 *
156 G -1.000 *
157 T -1.000 *
158 T -1.000 *
159 E -1.000 *
160 E -1.000 *
161 G -1.000 *
162 T -1.000 *
163 S -1.000 *
164 E -1.000 *
165 M -1.000 *
166 M -1.000 *
167 E -1.000 *
168 E -1.000 *
169 E -1.000 *
170 E -1.000 *
171 E -1.000 *
172 I -1.000 *
173 P -1.000 *
174 K -1.000 *
175 P -1.000 *
176 K -1.000 *
177 T -1.000 *
178 I -1.000 *
179 V -1.000 *
180 V -1.000 *
181 P -1.000 *
182 P -1.000 *
183 D -1.000 *
184 A -1.509
185 P -1.471
186 K -1.466
187 K 0.708
188 E -1.529
189 H 0.283
190 V -0.027
191 N 1.624
192 V 0.211
193 V 0.963
194 F 0.237
195 I 0.333
196 G 2.003
197 H 1.995
198 V 1.477
199 D 1.998
200 A -0.381
201 G 2.001
202 K 0.993
203 S 1.273
204 T 1.610
205 I -0.372
206 G 0.072
207 G 1.288
208 Q -0.024
209 I 0.725
210 M 0.198
211 Y -0.618
212 L -0.667
213 T -0.359
214 G 2.011
215 M -0.877
216 V 0.611
217 E 0.518
218 K -0.574
219 R 0.141
220 T -0.215
221 L -0.113
222 E 0.022
223 K -0.065
224 Y 0.192
225 E -0.111
226 R -0.501
227 E -0.151
228 A 0.789
229 K -1.046
230 E -0.153
231 K -0.883
232 N 0.283
233 R 0.651
234 E -0.876
235 T 1.224
236 W 0.626
237 Y 0.629
238 L -0.174
239 S 0.570
240 W 1.120
241 A 0.174
242 L 0.893
243 D 0.983
244 T -0.342
245 N -0.342
246 Q -0.944
247 E -0.373
248 E 2.008
249 R 0.656
250 D -0.613
251 K 0.059
252 G 1.285
253 K 0.301
254 T 2.008
255 V 0.585
256 E 0.111
257 V 0.169
258 G -0.061
259 R -0.116
260 A -0.515
261 Y -0.986
262 F 1.284
263 E -0.489
264 T 0.429
265 E -1.399
266 K -1.113
267 K -0.525
268 H -1.541
269 F -0.148
270 T 1.114
271 I 0.770
272 L 0.704
273 D 2.028
274 A 2.021
275 P 2.459
276 G 1.955
277 H 1.652
278 K 0.587
279 S 0.102
280 F 1.586
281 V 0.897
282 P 0.655
283 N 0.684
284 M 1.982
285 I 0.937
286 G -0.346
287 G 2.023
288 A 0.660
289 S 0.379
290 Q 0.930
291 A 2.459
292 D 1.315
293 L -0.418
294 A 0.238
295 V 0.411
296 L 1.208
297 V 0.113
298 I 0.252
299 S -0.274
300 A 0.506
301 R -0.892
302 K -1.275
303 G 1.545
304 E 0.786
305 F 1.115
306 E 0.987
307 T -0.212
308 G 1.073
309 F -0.369
310 E -0.244
311 K -0.546
312 G -0.273
313 G 1.624
314 Q 1.625
315 T 1.626
316 R 0.243
317 E 2.023
318 H 2.011
319 A -0.312
320 M -0.405
321 L 2.023
322 A 0.511
323 K -0.403
324 T 1.203
325 A -0.744
326 G 1.975
327 V 1.282
328 K -0.840
329 H -0.436
330 L 0.208
331 I 0.144
332 V 0.480
333 L -0.325
334 I -0.021
335 N 1.647
336 K 2.459
337 M 0.329
338 D 2.459
339 D -0.957
340 P -1.156
341 T -0.584
342 V -0.431
343 N -1.079
344 W 0.331
345 S -0.845
346 N -0.957
347 D -1.089
348 R 2.025
349 Y 0.952
350 E -1.041
351 E 0.914
352 C 0.718
353 K -1.286
354 E -1.027
355 K -0.598
356 L -0.139
357 V -1.375
358 P -1.382
359 F -0.422
360 L 0.193
361 K -0.194
362 K -0.890
363 V -0.410
364 G 2.459
365 F 0.869
366 N -0.760
367 P -0.893
368 K -1.230
369 K -0.616
370 D -1.151
371 I -0.171
372 Y -1.635
373 F -0.332
374 M 0.157
375 P 1.250
376 C -0.087
377 S 1.160
378 G 0.952
379 L -0.239
380 T -1.463
381 G 0.421
382 A -1.149
383 N -0.152
384 L 0.371
385 K -1.079
386 E -0.860
387 P -1.268
388 V -1.074
389 E -1.196
390 T -1.350
391 C -0.716
392 P -0.954
393 W 0.994
394 Y -0.082
395 I -0.922
396 G 0.501
397 L -1.541
398 A -0.719
399 F 0.678
400 I -0.699
401 S -0.720
402 Y -0.989
403 L 0.212
404 D 0.976
405 S -1.434
406 L -0.924
407 P -1.531
408 N -1.424
409 F -1.156
410 N -1.341
411 R -0.221
412 S -1.612
413 L -1.524
414 D -1.084
415 G -0.700
416 P 1.014
417 V -0.061
418 R -0.669
419 L -0.372
420 P 0.115
421 I 0.299
422 V -1.096
423 D -0.320
424 K 0.459
425 Y 0.436
426 K -0.468
427 D 0.320
428 M 0.009
429 G 2.459
430 T 0.378
431 V 0.261
432 I -0.112
433 L -0.743
434 G 2.023
435 K 0.903
436 L 0.244
437 E 1.022
438 S 0.502
439 G 2.459
440 S -1.398
441 I -0.161
442 C -1.151
443 K -0.548
444 G 0.367
445 Q -1.252
446 Q -1.447
447 L -0.248
448 A -1.398
449 M -0.261
450 M -0.559
451 P 1.660
452 N -1.335
453 K -1.224
454 H -1.619
455 I -1.500
456 V -0.377
457 E -0.756
458 V 0.102
459 L -0.884
460 S -0.305
461 L -0.219
462 L -1.086
463 S -1.131
464 D 0.254
465 E 0.251
466 V -1.110
467 E -1.293
468 T -0.880
469 E -1.227
470 L -1.599
471 V -0.162
472 A -1.579
473 P -0.067
474 G 1.585
475 E -0.402
476 N 0.536
477 L 0.553
478 K 0.387
479 L -0.103
480 R -0.287
481 L 0.617
482 K 0.158
483 G -0.020
484 I 0.292
485 E -0.129
486 E -0.835
487 E -0.615
488 E 0.282
489 I 0.511
490 L -1.109
491 P -1.005
492 G 1.643
493 F -0.381
494 I 0.695
495 L -0.342
496 C 0.309
497 D -0.531
498 P -1.059
499 N -1.287
500 N -0.982
501 L -0.316
502 C -0.306
503 H -1.507
504 S -1.507
505 G -0.357
506 R -1.385
507 T -1.613
508 F 1.884
509 D -1.367
510 A 0.840
511 Q 0.251
512 I -0.073
513 V -0.589
514 I 1.209
515 I 0.091
516 E -0.639
517 H 0.200
518 K 0.265
519 S 0.106
520 I -1.086
521 I 0.618
522 C -1.211
523 P -0.709
524 G 1.641
525 Y 1.038
526 N -0.732
527 A -0.004
528 V 0.498
529 L -0.027
530 H 0.665
531 I 0.310
532 H 0.957
533 T -0.020
534 C -0.119
535 I -0.620
536 E 0.013
537 E 0.044
538 V 0.219
539 E -0.622
540 I 0.161
541 T -1.488
542 A -1.182
543 L 0.565
544 I -0.964
545 C -1.274
546 M -0.766
547 V -0.567
548 D 0.981
549 K -0.047
550 K -0.550
551 S 0.652
552 G -0.305
553 E -0.831
554 K -1.081
555 S -1.246
556 K -0.889
557 T -1.362
558 R -1.539
559 P -0.157
560 R -1.175
561 F -1.329
562 V 0.301
563 K -0.062
564 Q -0.729
565 D 0.240
566 Q -0.432
567 V -0.929
568 C -0.525
569 I -0.355
570 A 0.266
571 R -1.197
572 L -0.250
573 R -0.936
574 T -0.623
575 A -1.395
576 G -0.728
577 T -0.737
578 I 0.002
579 C 0.324
580 L -0.002
581 E 2.022
582 T -1.126
583 F 0.741
584 K -1.124
585 D -0.848
586 F -0.334
587 P 0.475
588 Q -0.315
589 M 1.247
590 G 2.018
591 R 1.173
592 F 1.253
593 T 0.156
594 L 0.137
595 R 0.900
596 D 0.892
597 E 0.361
598 G 0.097
599 K -0.402
600 T 1.169
601 I 1.165
602 A 1.679
603 I 0.713
604 G 2.459
605 K -1.000 *
606 V 1.480
607 L -0.470
608 K -0.248
609 L -1.102
610 V -0.769
611 P -1.094
612 E -1.186
613 K -1.000 *
614 D -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 352.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
ITGTTLFPPT WEVLPTLPTP CLTPSAPLIK QLVYPNPTHP EMDASDSAPD SWEQADMEAT
70 80 90 100 110 120
EAQLNNSMAA LNVNAKPFVP NVNAVEFVPS FLVGSAPSDG QEEEQQQQGS CTTVGMDVSE
130 140 150 160 170 180
PVVENGETEM SPEESWDHKE EPIEAEPGGG SEGDGGTTEE GTSEMMEEEE EIPKPKTIVV
190 200 210 220 230 240
PPDAPKKEHV NVVFIGHVDA GKSTIGGQIM YLTGMVEKRT LEKYEREAKE KNRETWYLSW
250 260 270 280 290 300
ALDTNQEERD KGKTVEVGRA YFETEKKHFT ILDAPGHKSF VPNMIGGASQ ADLAVLVISA
310 320 330 340 350 360
RKGEFETGFE KGGQTREHAM LAKTAGVKHL IVLINKMDDP TVNWSNDRYE ECKEKLVPFL
370 380 390 400 410 420
KKVGFNPKKD IYFMPCSGLT GANLKEPVET CPWYIGLAFI SYLDSLPNFN RSLDGPVRLP
430 440 450 460 470 480
IVDKYKDMGT VILGKLESGS ICKGQQLAMM PNKHIVEVLS LLSDEVETEL VAPGENLKLR
490 500 510 520 530 540
LKGIEEEEIL PGFILCDPNN LCHSGRTFDA QIVIIEHKSI ICPGYNAVLH IHTCIEEVEI
550 560 570 580 590 600
TALICMVDKK SGEKSKTRPR FVKQDQVCIA RLRTAGTICL ETFKDFPQMG RFTLRDEGKT
610
IAIGKVLKLV PEKD
Sup35 protein is identified in proteomics study by Kirli et al. as a CRM1 binder. It is a Xenopus translation termination factor. Export activity is verified as GFP- and GFP-NLS-fusions in an LMB-sensitive manner. Purified protein can bind to mouse CRM1 in RanGTP-dependent manner. Putative NES is identified and tested to be active in GFP-NLS-NES fusion. However, exact sequence and sequence number cited in figure of the paper does not match uniprot entry listed. The closest sequence is identified and indicated in this entry.
Ref.1A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning, Kirli et al., eLife, 2015
[1]. "A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning"
Kırlı K, Karaca S, Dehne HJ, Samwer M, Pan KT, Lenz C, Urlaub H, Görlich D. (2015)
eLife,
4:e11466
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.