Summary for AP1-gamma (NES ID: 355)

Full Name
AP-1 complex subunit gamma     UniProt    
Alternative Names
Ap1g1, ufl1   
Organism
Xenopus laevis (African clawed frog)    
Experimental Evidence for CRM1-mediated Export
LMB Sensitive Ref.1A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning, Kirli et al., eLife, 2015
Mutations That Affect Nuclear Export
Unknown
Mutations That Affect CRM1 Binding
Unknown
Functional Export Signals
*shown as underlined residues in the full sequence
652VGGELLDLLGDLNLS666 Ref.1A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning, Kirli et al., eLife, 2015
Secondary Structure of Export Signal
Unknown
Other Residues Important for Export
Unknown
Sequence
Show FASTA Format Show Domain Info by CDD Show Secondary Structure by PSIPRED Show Conservation Score by AL2CO 
        10         20         30         40         50         60 
MPAPIRLREL IRTIRTARTQ AEEREMIQKE CAAIRSSFRE EDNTYRCRNV AKLLYMHMLG 

        70         80         90        100        110        120 
YPAHFGQLEC LKLIASQKFT DKRIGYLGAM LLLDERQDVH LLMTNCIKND LNHSTQYVQG 

       130        140        150        160        170        180 
LALCTLGCMG SAEMCRDLAG EVEKLLKTSN SYLRKKAALC AVHVIRKVPE LMEMFLPATK 

       190        200        210        220        230        240 
NLLNEKNHGV LHTSVVLLTE MCERSPDMLT HFRKLVPQLV RILKNLIMSG YSPEHDVSGI 

       250        260        270        280        290        300 
SDPFLQVRIL RLLRILGRND DDSSEAMNDI LAQVATNTET SKNVGNAILY ETVLTIMDIK 

       310        320        330        340        350        360 
SESGLRVLAI NILGRFLLNN DKNIRYVALT SLLKTVQTDH NAVQRHRSTI VDCLKDLDVS 

       370        380        390        400        410        420 
IKRRAMELSF ALVNGNNIRG MMKELLYFLD SCEPEFKADC ASGIFLAAEK YAPSKRWHID 

       430        440        450        460        470        480 
TIMRVLTTAG SYVRDDAVPN LIQLITNSSE MHEYTVQKLY KAILDDISQQ PLVQVCSWCI 

       490        500        510        520        530        540 
GEYGDLLVSG QCEEEEPIQV TEDEVLDILE SILISNMSTS VTRGFALTAI MKNSTRFNNT 

       550        560        570        580        590        600 
VNRIKKVVSI YGSSIDVELQ QRAVEYNALF KKYDHMRPAL LERMPIMEKA LTNGPTDLAQ 

       610        620        630        640        650        660 
TNGETDPAVI DSKPVQSIQQ PSSQANDLLD LLGGNDIQLV IPTAHPTKPA SVGGELLDLL 

       670        680        690        700        710        720 
GDLNLSGTPA AVPQMPAPQL LLDGLSGQPL FNDISGIPPI TAYNKNGLKI DFSFERSSTN 

       730        740        750        760        770        780 
ASITVITTQA SNCTDSDMTD FVFQAAVPKT FQLQLLSPSS NVLPAFNAGS ITQVIKVLNP 

       790        800        810                                  
QKQQLRMRIK LTYNHKGSAI QDLAEVSNFP PQSWQ
3D Structures in PDB
1IU1 (X-Ray,1.8 Å resolution)
Comments
AP1-gamma is identified in proteomics study by Kirli et al. as a CRM1 binder. It is a subunit of clathrin-associated adaptor protein complex 1 which functions in protein trafficking in golgi/endosomes. Export activity is verified as GFP- and GFP-NLS-fusions in an LMB-sensitive manner. Putative NES is identified and tested to be active in GFP-NLS-NES fusion. Ref.1A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning, Kirli et al., eLife, 2015
References
[1]. "A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning"
Kırlı K, Karaca S, Dehne HJ, Samwer M, Pan KT, Lenz C, Urlaub H, Görlich D. (2015) eLife, 4:e11466 PubMed
User Input
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus. Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.

Supporting comments *

Flag this NES *

Positive
Negative

E-mail: