Summary for UPF2 (NES ID: 357)
Full Name
MGC115246 protein UniProt
Alternative Names
UPF2.S
Organism
Xenopus laevis (African clawed frog)
Experimental Evidence for CRM1-mediated Export
Mutations That Affect Nuclear Export
Unknown
Mutations That Affect CRM1 Binding
Unknown
Functional Export Signals
*shown as underlined residues in the full sequence
506TTEELELELETLDIN520 Secondary Structure of Export Signal
Unknown
Other Residues Important for Export
Unknown
Sequence
Show FASTA Format
>tr|Q498G1|Q498G1_XENLA MGC115246 protein OS=Xenopus laevis OX=8355 GN=upf2.S PE=1 SV=1 MPAERKKPAGMEEKESPSSPRDKECTEKKATSSKDRVKDEPKACTKRDQSKASEEKKKQT DEDKQRKEDKECKTKEEDQVKADDEQMNTDGKNQDDEMKKKQEEEEANQREAAALQIKEK DEANQLHQEAWERHHTRKELRSKNQNAPENRPEESFFSRLDSSLKKNTAFVKKLKTITEQ QRDSLSHDFNSLNLSKYIAEAAASIVEAKLKISDVNCAVHLCSLFHQRYADFAQSLLQVW KKHFEARKEEKTPNITKLRTDLRFIAELTIIGIFTDKEGLSLNYEQLKNIINADRETHTH VSVVISFCRHCGDDIAGLVPRKVKCAAEKYNLNFPPSEIINPEKQQPFQNLLKEYFTSLT KHLKRDHRELQNIERQNRRILHTKGELSEDRHKQYEEFATSYQKLLASCQSLADLLDENM PELPQDKPAPEEHGPGIDIFTPGKPGDYDLEGGIWEDEDARNFYENLIDLKAFVPAILFK DNEKSSQSKETGKDNVKDTKEKDVPTTEELELELETLDINDDGIEMEGAEDAEDLTKKLL DEQEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKANRRKLVRAL FIVPRQRLDLLPFYARLVATLHPCMSDIAEDLCSMLKGDFRFHVRKKDQINIETKNKTVR FIGELAKFKMFNKTDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSSDSHLRTSVLL EQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYKDLSKVTT EKVLRQMRKLSWQDLEVKNYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDG VLEDIRLGMEVNQPKFNQRRISSVKFLGELYNYRMVESAVIFRTLYSFIFFGVNSDGSPS PLDPPEHLFRLRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYFWWKKSLDVWTKDYPF PIDIDYMISDTLELLRPKMKLCVSLNESVRQVQDLEREFLTKLGLMNDKESKHSMTEGDL VYEDDDEEEEGGAETEEQSGNESEMNEQEEDASENEEDEREEEEEENTDYMTDSNKENET DEENNEVMIKGGGIKHVPCAEDEDFIQALDKMMLENLQQRSVESVKVHQLDVAIPLHLKS QLKKGPALSIAEVDTESGDTMPFVMLTRRGNKQQFKILNVPMSSQLAANHWNQQQAEQEE RMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTG GRRRShow Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 987678999975557999996111101356775434677753333456541024420268
Pred: CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
AA: MPAERKKPAGMEEKESPSSPRDKECTEKKATSSKDRVKDEPKACTKRDQSKASEEKKKQT
10 20 30 40 50 60
Conf: 501110112322222111123564444435677761000012358874566776446447
Pred: CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AA: DEDKQRKEDKECKTKEEDQVKADDEQMNTDGKNQDDEMKKKQEEEEANQREAAALQIKEK
70 80 90 100 110 120
Conf: 999999999999999999998861369999998732222211011114798863102978
Pred: HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHH
AA: DEANQLHQEAWERHHTRKELRSKNQNAPENRPEESFFSRLDSSLKKNTAFVKKLKTITEQ
130 140 150 160 170 180
Conf: 678898741027602339999999996541354046899999984125753269899999
Pred: HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
AA: QRDSLSHDFNSLNLSKYIAEAAASIVEAKLKISDVNCAVHLCSLFHQRYADFAQSLLQVW
190 200 210 220 230 240
Conf: 951266744446663234036899999875410248988624199999986119577874
Pred: HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
AA: KKHFEARKEEKTPNITKLRTDLRFIAELTIIGIFTDKEGLSLNYEQLKNIINADRETHTH
250 260 270 280 290 300
Conf: 469999976517544467765310121102899999999994457999999999999999
Pred: HHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AA: VSVVISFCRHCGDDIAGLVPRKVKCAAEKYNLNFPPSEIINPEKQQPFQNLLKEYFTSLT
310 320 330 340 350 360
Conf: 999999999999999879999860788878899999999999999982998997708999
Pred: HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AA: KHLKRDHRELQNIERQNRRILHTKGELSEDRHKQYEEFATSYQKLLASCQSLADLLDENM
370 380 390 400 410 420
Conf: 999999999988888544458999888888899999611111113511100124622224
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: PELPQDKPAPEEHGPGIDIFTPGKPGDYDLEGGIWEDEDARNFYENLIDLKAFVPAILFK
430 440 450 460 470 480
Conf: 665455752238788666545799982567653310247887743357762022221024
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC
AA: DNEKSSQSKETGKDNVKDTKEKDVPTTEELELELETLDINDDGIEMEGAEDAEDLTKKLL
490 500 510 520 530 540
Conf: 411333322102640379999999839899785788899999876107634678899998
Pred: CCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AA: DEQEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKANRRKLVRAL
550 560 570 580 590 600
Conf: 308987754024678888852276642499999999988766553101013556210434
Pred: HCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AA: FIVPRQRLDLLPFYARLVATLHPCMSDIAEDLCSMLKGDFRFHVRKKDQINIETKNKTVR
610 620 630 640 650 660
Conf: 212001556545302678776511578877599967655310444335987348899999
Pred: HHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
AA: FIGELAKFKMFNKTDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSSDSHLRTSVLL
670 680 690 700 710 720
Conf: 999844542037635786761100330899976454556992899999985220156538
Pred: HHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH
AA: EQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYKDLSKVTT
730 740 750 760 770 780
Conf: 999999971899846789999998423552345629999999966841024631332210
Pred: HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC
AA: EKVLRQMRKLSWQDLEVKNYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDG
790 800 810 820 830 840
Conf: 365745300359998402457786632000140125604699999877624789999999
Pred: HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
AA: VLEDIRLGMEVNQPKFNQRRISSVKFLGELYNYRMVESAVIFRTLYSFIFFGVNSDGSPS
850 860 870 880 890 900
Conf: 999999940688989998431023578875453025798989998741467766667898
Pred: CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
AA: PLDPPEHLFRLRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYFWWKKSLDVWTKDYPF
910 920 930 940 950 960
Conf: 654369899988651699634479999999999999999876225677676677766899
Pred: CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AA: PIDIDYMISDTLELLRPKMKLCVSLNESVRQVQDLEREFLTKLGLMNDKESKHSMTEGDL
970 980 990 1000 1010 1020
Conf: 889984211588865457788777786543368763233200000245556789998999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
AA: VYEDDDEEEEGGAETEEQSGNESEMNEQEEDASENEEDEREEEEEENTDYMTDSNKENET
1030 1040 1050 1060 1070 1080
Conf: 864432102489888899951079999999999954332100012357665432211223
Pred: CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AA: DEENNEVMIKGGGIKHVPCAEDEDFIQALDKMMLENLQQRSVESVKVHQLDVAIPLHLKS
1090 1100 1110 1120 1130 1140
Conf: 367899777666789999801299998515833226762379949999969999999999
Pred: CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
AA: QLKKGPALSIAEVDTESGDTMPFVMLTRRGNKQQFKILNVPMSSQLAANHWNQQQAEQEE
1150 1160 1170 1180 1190 1200
Conf: 987313413710132244279987521069999998988888878999999855555668
Pred: HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: RMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTG
1210 1220 1230 1240 1250 1260
Conf: 8789
Pred: CCCC
AA: GRRR
Show Conservation Score by AL2CO
1 M -1.000 *
2 P -1.000 *
3 A -1.000 *
4 E -1.000 *
5 R -1.000 *
6 K -1.000 *
7 K -1.000 *
8 P -1.000 *
9 A -1.000 *
10 G -1.000 *
11 M -1.000 *
12 E -1.000 *
13 E -1.000 *
14 K -1.000 *
15 E -1.000 *
16 S -1.000 *
17 P -1.000 *
18 S -1.000 *
19 S -1.000 *
20 P -1.000 *
21 R -1.000 *
22 D -1.000 *
23 K -1.000 *
24 E -1.000 *
25 C -1.000 *
26 T -1.000 *
27 E -1.000 *
28 K -1.000 *
29 K -1.000 *
30 A -1.000 *
31 T -1.000 *
32 S -1.000 *
33 S -1.000 *
34 K -1.000 *
35 D -1.000 *
36 R -1.000 *
37 V -1.000 *
38 K -1.000 *
39 D -1.000 *
40 E -1.000 *
41 P -1.000 *
42 K -1.000 *
43 A -1.000 *
44 C -1.000 *
45 T -1.000 *
46 K -1.000 *
47 R -1.000 *
48 D -1.000 *
49 Q -1.000 *
50 S -1.000 *
51 K -1.000 *
52 A -1.000 *
53 S -1.000 *
54 E -1.000 *
55 E -1.000 *
56 K -1.000 *
57 K -1.000 *
58 K -1.000 *
59 Q -1.000 *
60 T -1.000 *
61 D -1.000 *
62 E -1.000 *
63 D -1.000 *
64 K -1.000 *
65 Q -1.000 *
66 R -1.000 *
67 K -1.000 *
68 E -1.000 *
69 D -1.000 *
70 K -1.000 *
71 E -1.000 *
72 C -1.000 *
73 K -1.000 *
74 T -1.000 *
75 K -1.000 *
76 E -1.000 *
77 E -1.000 *
78 D -1.000 *
79 Q -1.000 *
80 V -1.000 *
81 K -1.000 *
82 A -1.000 *
83 D -1.000 *
84 D -1.000 *
85 E -1.000 *
86 Q -1.000 *
87 M -1.000 *
88 N -1.000 *
89 T -1.000 *
90 D -1.000 *
91 G -1.000 *
92 K -1.000 *
93 N -1.000 *
94 Q -1.000 *
95 D -1.000 *
96 D -1.000 *
97 E -1.000 *
98 M -1.000 *
99 K -1.000 *
100 K -1.000 *
101 K -1.000 *
102 Q -1.000 *
103 E -1.000 *
104 E -1.000 *
105 E -1.000 *
106 E -1.000 *
107 A -1.000 *
108 N -1.000 *
109 Q -1.000 *
110 R -1.000 *
111 E -1.000 *
112 A -1.000 *
113 A -1.000 *
114 A -1.000 *
115 L -1.000 *
116 Q -1.000 *
117 I -1.000 *
118 K -1.000 *
119 E -1.000 *
120 K -1.000 *
121 D -1.000 *
122 E -1.000 *
123 A -1.000 *
124 N -1.000 *
125 Q -1.000 *
126 L -1.000 *
127 H -1.000 *
128 Q -1.000 *
129 E 0.098
130 A -1.062
131 W -0.905
132 E -0.467
133 R 0.005
134 H -1.013
135 H -0.736
136 T -0.825
137 R 0.735
138 K -0.831
139 E -0.640
140 L 0.509
141 R 0.558
142 S -0.588
143 K -0.450
144 N 0.958
145 Q -0.874
146 N -0.593
147 A -0.420
148 P -0.945
149 E -0.926
150 N -0.542
151 R -0.814
152 P -0.780
153 E -0.511
154 E -0.854
155 S -0.870
156 F -0.922
157 F -0.627
158 S -0.711
159 R -0.144
160 L 0.729
161 D 2.064
162 S 1.478
163 S 1.078
164 L 1.506
165 K 2.599
166 K 3.012
167 N 1.256
168 T 1.418
169 A 1.510
170 F 1.326
171 V 0.894
172 K 2.070
173 K 3.289
174 L 1.045
175 K 2.276
176 T -0.001
177 I 0.711
178 T 0.220
179 E -0.800
180 Q -0.016
181 Q -0.449
182 R -0.716
183 D -0.018
184 S -0.142
185 L 0.826
186 S 0.339
187 H -0.101
188 D 2.751
189 F 0.711
190 N -0.807
191 S -0.388
192 L 2.158
193 N 0.916
194 L 1.969
195 S 0.192
196 K 2.329
197 Y 2.531
198 I 1.223
199 A 0.544
200 E 4.256
201 A 1.019
202 A 0.626
203 A -0.137
204 S 0.728
205 I 0.301
206 V -0.426
207 E 1.937
208 A 0.495
209 K -0.092
210 L -0.395
211 K 2.096
212 I -0.598
213 S 0.443
214 D 2.661
215 V 0.474
216 N -0.953
217 C -0.053
218 A 0.504
219 V 1.070
220 H -0.266
221 L 1.338
222 C 0.600
223 S 0.385
224 L -0.766
225 F 1.422
226 H 1.542
227 Q -0.192
228 R 1.149
229 Y 2.518
230 A -0.179
231 D -0.028
232 F 1.167
233 A -0.133
234 Q -0.981
235 S -1.046
236 L 0.781
237 L -0.508
238 Q -0.957
239 V -0.929
240 W 0.141
241 K -0.855
242 K -0.643
243 H -0.685
244 F 0.025
245 E -0.723
246 A -0.725
247 R -0.468
248 K -0.415
249 E -0.530
250 E 0.370
251 K -0.290
252 T -0.558
253 P -0.658
254 N 0.064
255 I -0.185
256 T -0.463
257 K 1.125
258 L -0.265
259 R 2.672
260 T -0.279
261 D -0.323
262 L 1.536
263 R 1.762
264 F 0.878
265 I 0.091
266 A 0.335
267 E 3.526
268 L 1.803
269 T -0.548
270 I -0.060
271 I 0.062
272 G 1.087
273 I 0.402
274 F -0.196
275 T -0.634
276 D -0.489
277 K -0.730
278 E -0.589
279 G -0.176
280 L -0.647
281 S -0.876
282 L -0.977
283 N 0.240
284 Y -0.522
285 E -0.728
286 Q -0.552
287 L 1.043
288 K -0.235
289 N -0.759
290 I 0.086
291 I -0.201
292 N -0.448
293 A -1.064
294 D 0.748
295 R -0.420
296 E -0.160
297 T -0.771
298 H -0.146
299 T -0.622
300 H -0.478
301 V 0.031
302 S 0.110
303 V 1.279
304 V 0.898
305 I 0.083
306 S -0.033
307 F 1.651
308 C 0.677
309 R 3.029
310 H -0.683
311 C 0.072
312 G 0.485
313 D -1.071
314 D -0.580
315 I 0.661
316 A 0.651
317 G 0.961
318 L -0.336
319 V -0.819
320 P -0.398
321 R -0.845
322 K -0.758
323 V -1.116
324 K -0.673
325 C -0.961
326 A -0.762
327 A -0.761
328 E -0.219
329 K -0.881
330 Y -1.143
331 N -0.763
332 L -0.754
333 N -0.705
334 F -1.127
335 P -1.137
336 P -1.045
337 S -0.924
338 E -0.891
339 I -0.567
340 I -0.215
341 N -0.461
342 P -0.774
343 E -0.120
344 K -0.882
345 Q 0.333
346 Q -0.771
347 P -0.797
348 F 0.559
349 Q -0.613
350 N -0.822
351 L -0.037
352 L 0.498
353 K -0.999
354 E -0.768
355 Y 1.779
356 F 0.125
357 T -0.488
358 S -0.561
359 L 0.796
360 T -0.766
361 K -0.681
362 H -0.346
363 L 0.626
364 K -0.460
365 R -0.341
366 D -0.632
367 H 0.075
368 R -0.656
369 E -0.510
370 L 0.733
371 Q -0.918
372 N -0.522
373 I -0.333
374 E -0.610
375 R -0.190
376 Q -0.354
377 N -0.180
378 R -0.630
379 R 0.127
380 I -0.823
381 L -0.262
382 H -0.387
383 T -0.280
384 K 0.157
385 G 2.911
386 E 0.409
387 L 1.158
388 S -0.343
389 E 0.197
390 D 0.704
391 R -0.641
392 H -0.308
393 K -0.431
394 Q -0.537
395 Y -0.083
396 E 0.516
397 E -0.378
398 F -0.392
399 A -0.546
400 T -0.271
401 S -0.595
402 Y 0.153
403 Q 0.441
404 K 0.119
405 L 0.453
406 L -0.643
407 A -0.485
408 S -0.230
409 C 0.081
410 Q -0.418
411 S -0.340
412 L 1.017
413 A 1.615
414 D 0.578
415 L -0.153
416 L 1.946
417 D -0.131
418 E -0.445
419 N -0.240
420 M 0.077
421 P 0.779
422 E -0.712
423 L 0.535
424 P -0.486
425 Q -0.559
426 D -0.925
427 K -0.954
428 P -0.962
429 A -0.902
430 P -0.926
431 E -0.787
432 E -1.006
433 H -0.773
434 G -0.773
435 P -0.881
436 G -0.373
437 I -0.708
438 D -0.517
439 I -0.906
440 F -1.060
441 T -1.011
442 P -0.986
443 G -0.847
444 K -0.857
445 P -1.134
446 G -0.662
447 D -0.414
448 Y -0.840
449 D -1.040
450 L -0.979
451 E -1.049
452 G -0.616
453 G 0.145
454 I 0.385
455 W 2.362
456 E -0.011
457 D 1.619
458 E 1.418
459 D 2.007
460 A 0.460
461 R 0.909
462 N -0.408
463 F 2.746
464 Y 2.739
465 E 0.657
466 N -0.136
467 L 0.821
468 I -0.068
469 D 0.866
470 L 1.366
471 K -0.206
472 A -0.604
473 F -0.685
474 V 0.646
475 P 1.385
476 A -0.649
477 I -0.695
478 L -0.191
479 F -0.186
480 K -0.446
481 D -0.639
482 N -0.894
483 E -0.487
484 K -0.673
485 S -0.812
486 S -0.794
487 Q -0.784
488 S -0.702
489 K -0.818
490 E -0.673
491 T -1.032
492 G -1.003
493 K -0.818
494 D -0.779
495 N -0.980
496 V -1.101
497 K -0.875
498 D -0.681
499 T -0.812
500 K -0.875
501 E -0.707
502 K -0.789
503 D -0.869
504 V -0.878
505 P -0.824
506 T -0.862
507 T -0.909
508 E -0.882
509 E -0.677
510 L -0.869
511 E -0.716
512 L -1.007
513 E -0.961
514 L -0.989
515 E -0.790
516 T -0.868
517 L -1.083
518 D -0.772
519 I -1.012
520 N -0.908
521 D -0.998
522 D -0.805
523 G -1.003
524 I -0.965
525 E -0.814
526 M -0.975
527 E -0.484
528 G -0.958
529 A -0.963
530 E -0.628
531 D -0.709
532 A -0.753
533 E -0.691
534 D -0.792
535 L -0.878
536 T -0.891
537 K -0.924
538 K -0.893
539 L -0.962
540 L -0.847
541 D -0.838
542 E -0.790
543 Q -0.861
544 E -0.687
545 Q -0.950
546 E -0.572
547 D -0.832
548 E -0.668
549 E -0.868
550 A -0.810
551 S -0.798
552 T -0.852
553 G -0.753
554 S -0.773
555 H -0.753
556 L -1.024
557 K -0.577
558 L -0.742
559 I -0.814
560 V -0.057
561 D 0.009
562 A -0.474
563 F 0.803
564 I 0.852
565 Q -0.684
566 Q -0.307
567 L 2.822
568 P -0.430
569 N -0.521
570 C 0.217
571 V -0.861
572 N 0.373
573 R 0.607
574 D 0.443
575 L -0.671
576 I 0.913
577 D 2.679
578 K 0.044
579 A -0.138
580 A 1.319
581 M -0.346
582 D 0.331
583 F 1.549
584 C 0.033
585 M -0.034
586 N -1.000 *
587 M 0.430
588 N 0.832
589 T 1.016
590 K 1.792
591 A -0.288
592 N 0.398
593 R 1.913
594 R 0.383
595 K 1.526
596 L 1.555
597 V 0.077
598 R 0.600
599 A -0.336
600 L 1.302
601 F -0.718
602 I -0.469
603 V 0.246
604 P -0.116
605 R 0.001
606 Q -0.410
607 R 0.410
608 L -0.497
609 D 0.517
610 L 0.504
611 L 1.256
612 P 1.033
613 F 0.001
614 Y 1.396
615 A 1.170
616 R 3.372
617 L 1.712
618 V 1.388
619 A 1.463
620 T 0.545
621 L 1.903
622 H -0.550
623 P -0.248
624 C 0.049
625 M -0.362
626 S -0.012
627 D 0.736
628 I 1.197
629 A 0.006
630 E -0.891
631 D -0.303
632 L 1.220
633 C 0.243
634 S -0.654
635 M -1.070
636 L 1.770
637 K -0.244
638 G -0.504
639 D 0.295
640 F 1.230
641 R 0.020
642 F -0.506
643 H -0.014
644 V -0.205
645 R 0.101
646 K 0.114
647 K 1.129
648 D -0.380
649 Q -0.308
650 I -0.930
651 N -0.474
652 I -0.532
653 E -0.077
654 T -0.506
655 K 2.332
656 N 0.111
657 K -0.308
658 T 0.823
659 V 0.756
660 R 0.252
661 F 1.603
662 I 0.808
663 G 1.760
664 E 1.327
665 L 1.775
666 A 0.764
667 K 3.788
668 F 3.249
669 K 0.245
670 M 1.167
671 F 0.149
672 N 0.409
673 K -0.766
674 T -0.752
675 D -0.396
676 T 0.619
677 L 2.009
678 H -0.370
679 C -0.003
680 L 1.183
681 K 1.152
682 M -0.636
683 L 0.494
684 L 1.249
685 S -0.812
686 D 0.554
687 F 1.860
688 S -0.550
689 H -0.156
690 H -0.344
691 H 0.196
692 I 1.979
693 E 0.679
694 M 0.428
695 A 0.341
696 C 0.971
697 T -0.745
698 L 1.463
699 L 1.442
700 E 2.576
701 T 0.083
702 C 0.568
703 G 4.019
704 R 0.369
705 F 2.237
706 L 3.342
707 F 0.574
708 R 0.810
709 S -0.566
710 S -0.256
711 D -0.204
712 S 1.200
713 H -0.374
714 L -0.999
715 R 0.376
716 T 0.470
717 S -0.738
718 V -0.813
719 L 0.253
720 L 1.440
721 E 0.922
722 Q 0.050
723 M 1.402
724 M -0.270
725 R 1.654
726 K 0.659
727 K 1.856
728 Q -0.452
729 A -0.197
730 M -0.262
731 H -0.398
732 L 1.001
733 D 0.179
734 A -0.569
735 R 0.251
736 Y -0.005
737 V -0.552
738 T -0.147
739 M 0.564
740 V 1.683
741 E 1.160
742 N 1.532
743 A 1.815
744 Y 0.350
745 Y 0.702
746 Y -0.371
747 C 1.651
748 N -0.185
749 P 2.653
750 P 1.228
751 P -0.192
752 A -0.326
753 E -0.566
754 K -0.483
755 T -0.421
756 V -0.733
757 K -0.559
758 K -0.058
759 K -0.479
760 R 0.317
761 P 0.200
762 P 0.318
763 L 0.118
764 Q 0.294
765 E -0.237
766 Y 3.007
767 I 1.128
768 R -0.328
769 K 0.145
770 L 1.198
771 L 1.058
772 Y -0.166
773 K -0.850
774 D -0.543
775 L 1.793
776 S -0.693
777 K -0.328
778 V -0.764
779 T -0.110
780 T -0.316
781 E -0.533
782 K -0.772
783 V 0.579
784 L -0.068
785 R -0.026
786 Q -0.404
787 M 1.067
788 R 1.048
789 K 1.767
790 L 1.180
791 S 0.589
792 W 3.362
793 Q -0.174
794 D 1.189
795 L -0.832
796 E -0.536
797 V 0.132
798 K -1.141
799 N -0.950
800 Y -0.483
801 V 0.613
802 I -0.653
803 C -0.154
804 C -0.378
805 M 1.314
806 I -0.080
807 N 0.001
808 I 0.470
809 W -0.369
810 N 0.148
811 V 0.064
812 K 1.024
813 Y 0.508
814 N -0.790
815 S 0.025
816 I 0.915
817 H -0.573
818 C -0.474
819 V 0.986
820 A 1.465
821 N -0.933
822 L 1.315
823 L 0.794
824 A -0.362
825 G -0.179
826 L 1.575
827 V -0.981
828 L -0.683
829 Y 0.114
830 Q 0.711
831 E -0.380
832 D -0.943
833 V 1.038
834 G -0.172
835 I 0.097
836 H -1.185
837 V 0.932
838 V 1.443
839 D 2.310
840 G -0.108
841 V 1.143
842 L 0.349
843 E 2.742
844 D -0.568
845 I 1.691
846 R -0.471
847 L -0.456
848 G 0.053
849 M 1.597
850 E 1.501
851 V -0.895
852 N 0.590
853 Q -0.642
854 P -0.200
855 K -0.310
856 F -0.913
857 N 0.498
858 Q 2.561
859 R 0.737
860 R 0.988
861 I 1.276
862 S 0.476
863 S -0.990
864 V 0.913
865 K 0.518
866 F 2.264
867 L 2.070
868 G 2.367
869 E 1.512
870 L 2.017
871 Y 2.347
872 N 0.140
873 Y 0.003
874 R -0.076
875 M 0.391
876 V 0.785
877 E 0.000
878 S -0.066
879 A -0.648
880 V -0.190
881 I 2.310
882 F 1.159
883 R -0.016
884 T 0.154
885 L 1.615
886 Y 0.928
887 S -0.461
888 F 0.665
889 I 1.125
890 F -0.717
891 F 0.511
892 G 1.406
893 V -0.236
894 N -0.570
895 S -1.059
896 D -0.634
897 G -0.855
898 S -0.924
899 P -0.772
900 S -0.791
901 P -0.727
902 L -0.507
903 D 2.292
904 P -0.409
905 P -0.460
906 E -0.026
907 H 0.836
908 L 0.241
909 F 1.097
910 R 4.196
911 L 1.210
912 R 1.127
913 L 1.915
914 V 1.270
915 C 0.445
916 T -0.037
917 I 1.097
918 L 2.562
919 D 0.692
920 T 0.639
921 C 0.959
922 G 1.004
923 Q -0.961
924 Y -0.245
925 F 0.749
926 D -0.805
927 R -0.207
928 G 0.155
929 S -0.766
930 S -0.768
931 K 0.118
932 R 0.068
933 K 0.731
934 L 1.635
935 D 0.341
936 C -1.089
937 F 2.169
938 L 1.571
939 V -0.471
940 Y 0.732
941 F 2.129
942 Q 0.498
943 R -0.366
944 Y 2.176
945 F -0.062
946 W -0.570
947 W -0.924
948 K 1.789
949 K -0.857
950 S -0.756
951 L -1.000 *
952 D -1.000 *
953 V -1.000 *
954 W -1.000 *
955 T -1.000 *
956 K -1.000 *
957 D -1.000 *
958 Y -1.000 *
959 P 0.223
960 F 0.631
961 P 1.990
962 I -0.099
963 D -0.071
964 I 1.036
965 D 0.156
966 Y 0.506
967 M -0.373
968 I 0.816
969 S -0.800
970 D 1.783
971 T 0.371
972 L 0.387
973 E -0.796
974 L -0.903
975 L 0.541
976 R 0.453
977 P 0.116
978 K -0.070
979 M -0.458
980 K -0.596
981 L -0.461
982 C -0.661
983 V -0.757
984 S 0.037
985 L -0.532
986 N -0.208
987 E 0.697
988 S 0.899
989 V -1.028
990 R -0.911
991 Q -0.283
992 V 0.639
993 Q -0.714
994 D -0.599
995 L -0.082
996 E -0.950
997 R -0.667
998 E -0.704
999 F -1.057
1000 L -1.115
1001 T -1.048
1002 K -0.995
1003 L -1.054
1004 G -0.827
1005 L -1.016
1006 M -1.197
1007 N -1.006
1008 D -0.997
1009 K -1.070
1010 E -0.939
1011 S -0.957
1012 K -0.883
1013 H -0.850
1014 S -1.087
1015 M -1.057
1016 T -0.886
1017 E -0.948
1018 G -0.968
1019 D -0.855
1020 L -1.018
1021 V -1.041
1022 Y -1.120
1023 E -0.880
1024 D -0.927
1025 D -0.846
1026 D -0.838
1027 E -0.974
1028 E -1.074
1029 E -0.971
1030 E -0.774
1031 G -0.865
1032 G -0.991
1033 A -1.019
1034 E -0.813
1035 T -0.847
1036 E -0.823
1037 E -0.863
1038 Q -0.948
1039 S -0.847
1040 G -0.760
1041 N -1.064
1042 E -0.875
1043 S -0.662
1044 E -0.898
1045 M -1.047
1046 N -1.054
1047 E -0.786
1048 Q -0.937
1049 E -0.908
1050 E -0.949
1051 D -0.952
1052 A -1.040
1053 S -1.042
1054 E -0.954
1055 N -1.083
1056 E -1.081
1057 E -0.974
1058 D -0.948
1059 E -0.988
1060 R -1.120
1061 E -1.050
1062 E -0.941
1063 E -0.884
1064 E -0.749
1065 E -0.856
1066 E -0.876
1067 N -0.952
1068 T -1.120
1069 D -0.831
1070 Y -1.141
1071 M -1.025
1072 T -1.022
1073 D -0.990
1074 S -0.863
1075 N -1.117
1076 K -1.045
1077 E -1.064
1078 N -1.044
1079 E -0.944
1080 T -1.039
1081 D -0.874
1082 E -0.858
1083 E -0.711
1084 N -0.759
1085 N -0.787
1086 E -0.912
1087 V -0.973
1088 M -1.116
1089 I -0.807
1090 K -0.927
1091 G -1.103
1092 G -0.903
1093 G -0.993
1094 I -0.653
1095 K -0.852
1096 H -1.095
1097 V -0.870
1098 P -0.652
1099 C -0.712
1100 A -0.531
1101 E 0.369
1102 D 0.310
1103 E -0.190
1104 D 0.402
1105 F 1.329
1106 I -0.193
1107 Q -0.143
1108 A 0.492
1109 L 1.119
1110 D -0.285
1111 K 0.296
1112 M 0.690
1113 M 0.558
1114 L -0.361
1115 E 0.984
1116 N -0.103
1117 L -0.739
1118 Q -0.619
1119 Q -0.447
1120 R 0.230
1121 S -0.319
1122 V -0.978
1123 E -0.397
1124 S -0.526
1125 V -0.592
1126 K 0.045
1127 V -0.456
1128 H -0.599
1129 Q -0.713
1130 L -0.722
1131 D -0.125
1132 V -0.336
1133 A -0.523
1134 I 0.271
1135 P 1.068
1136 L -0.533
1137 H -0.922
1138 L -0.745
1139 K -0.672
1140 S -0.835
1141 Q -0.842
1142 L -1.095
1143 K -0.909
1144 K -1.154
1145 G -1.082
1146 P -1.006
1147 A -1.061
1148 L -1.116
1149 S -1.009
1150 I -0.899
1151 A -0.957
1152 E -0.926
1153 V -0.846
1154 D -0.777
1155 T -0.911
1156 E -0.758
1157 S -0.881
1158 G -0.577
1159 D -0.458
1160 T -0.831
1161 M 0.395
1162 P -0.832
1163 F 1.178
1164 V -0.279
1165 M 1.267
1166 L 1.320
1167 T 0.574
1168 R 2.328
1169 R 1.593
1170 G 1.309
1171 N 0.528
1172 K 1.820
1173 Q -0.261
1174 Q -0.359
1175 F -0.267
1176 K 0.704
1177 I -0.920
1178 L 1.343
1179 N -0.904
1180 V 1.294
1181 P 2.277
1182 M -0.617
1183 S 0.131
1184 S 0.104
1185 Q -0.688
1186 L 1.852
1187 A 1.002
1188 A -0.434
1189 N -0.143
1190 H -0.249
1191 W -0.266
1192 N -0.425
1193 Q -0.302
1194 Q 0.076
1195 Q -0.107
1196 A 0.063
1197 E -0.241
1198 Q -0.268
1199 E -0.330
1200 E 1.808
1201 R 0.528
1202 M -0.106
1203 R -0.120
1204 M 0.873
1205 K 2.647
1206 K 0.149
1207 L 0.438
1208 T 2.383
1209 L 3.098
1210 D -0.188
1211 I -0.094
1212 N -0.323
1213 E -0.654
1214 R -0.139
1215 Q -0.404
1216 E -0.028
1217 Q -0.900
1218 E -0.125
1219 D -0.601
1220 Y -1.216
1221 Q -0.687
1222 E -0.637
1223 M -1.113
1224 L -1.108
1225 Q -1.035
1226 S -0.967
1227 L -1.102
1228 A -1.023
1229 Q -1.105
1230 R -0.948
1231 P -0.806
1232 A -0.929
1233 P -0.546
1234 A -1.123
1235 N -0.766
1236 T -0.995
1237 N -0.760
1238 R -0.682
1239 E -0.926
1240 R -0.869
1241 R -0.569
1242 P -1.000 *
1243 R -1.000 *
1244 Y -1.000 *
1245 Q -1.000 *
1246 H -1.000 *
1247 P -1.000 *
1248 K -1.000 *
1249 G -1.000 *
1250 A -1.000 *
1251 P -1.000 *
1252 N -1.000 *
1253 A -1.000 *
1254 D -1.000 *
1255 L -1.000 *
1256 I -1.000 *
1257 F -1.000 *
1258 K -1.000 *
1259 T -1.000 *
1260 G -1.000 *
1261 G -1.000 *
1262 R -1.000 *
1263 R -1.000 *
1264 R -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 357.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60MPAERKKPAG MEEKESPSSP RDKECTEKKA TSSKDRVKDE PKACTKRDQS KASEEKKKQT70 80 90 100 110 120DEDKQRKEDK ECKTKEEDQV KADDEQMNTD GKNQDDEMKK KQEEEEANQR EAAALQIKEK130 140 150 160 170 180DEANQLHQEA WERHHTRKEL RSKNQNAPEN RPEESFFSRL DSSLKKNTAF VKKLKTITEQ190 200 210 220 230 240QRDSLSHDFN SLNLSKYIAE AAASIVEAKL KISDVNCAVH LCSLFHQRYA DFAQSLLQVW250 260 270 280 290 300KKHFEARKEE KTPNITKLRT DLRFIAELTI IGIFTDKEGL SLNYEQLKNI INADRETHTH310 320 330 340 350 360VSVVISFCRH CGDDIAGLVP RKVKCAAEKY NLNFPPSEII NPEKQQPFQN LLKEYFTSLT370 380 390 400 410 420KHLKRDHREL QNIERQNRRI LHTKGELSED RHKQYEEFAT SYQKLLASCQ SLADLLDENM430 440 450 460 470 480PELPQDKPAP EEHGPGIDIF TPGKPGDYDL EGGIWEDEDA RNFYENLIDL KAFVPAILFK490 500 510 520 530 540DNEKSSQSKE TGKDNVKDTK EKDVPTTEEL ELELETLDIN DDGIEMEGAE DAEDLTKKLL550 560 570 580 590 600DEQEQEDEEA STGSHLKLIV DAFIQQLPNC VNRDLIDKAA MDFCMNMNTK ANRRKLVRAL610 620 630 640 650 660FIVPRQRLDL LPFYARLVAT LHPCMSDIAE DLCSMLKGDF RFHVRKKDQI NIETKNKTVR670 680 690 700 710 720FIGELAKFKM FNKTDTLHCL KMLLSDFSHH HIEMACTLLE TCGRFLFRSS DSHLRTSVLL730 740 750 760 770 780EQMMRKKQAM HLDARYVTMV ENAYYYCNPP PAEKTVKKKR PPLQEYIRKL LYKDLSKVTT790 800 810 820 830 840EKVLRQMRKL SWQDLEVKNY VICCMINIWN VKYNSIHCVA NLLAGLVLYQ EDVGIHVVDG850 860 870 880 890 900VLEDIRLGME VNQPKFNQRR ISSVKFLGEL YNYRMVESAV IFRTLYSFIF FGVNSDGSPS910 920 930 940 950 960PLDPPEHLFR LRLVCTILDT CGQYFDRGSS KRKLDCFLVY FQRYFWWKKS LDVWTKDYPF970 980 990 1000 1010 1020PIDIDYMISD TLELLRPKMK LCVSLNESVR QVQDLEREFL TKLGLMNDKE SKHSMTEGDL1030 1040 1050 1060 1070 1080VYEDDDEEEE GGAETEEQSG NESEMNEQEE DASENEEDER EEEEEENTDY MTDSNKENET1090 1100 1110 1120 1130 1140DEENNEVMIK GGGIKHVPCA EDEDFIQALD KMMLENLQQR SVESVKVHQL DVAIPLHLKS1150 1160 1170 1180 1190 1200QLKKGPALSI AEVDTESGDT MPFVMLTRRG NKQQFKILNV PMSSQLAANH WNQQQAEQEE1210 1220 1230 1240 1250 1260RMRMKKLTLD INERQEQEDY QEMLQSLAQR PAPANTNRER RPRYQHPKGA PNADLIFKTGGRRR
3D Structures in PDB
4CEK (X-Ray,2.35 Å resolution)
Comments
Xenopus UPF2 is identified in proteomics study by Kirli et al. as a CRM1 binder. UPF2 is an RNA-binding protein involved in the nonsense-mediated decay of mRNAs. Export activity is verified as GFP- and GFP-NLS-fusions in an LMB-sensitive manner. Putative NES is identified and tested to be active in GFP-NLS-NES fusion. NES sequence is predicted to be in disordered region. The NES is within second MIF4G domain in the human homolog which is not resolved in the crystal structure of the domain. Ref.1A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning, Kirli et al., eLife, 2015
References
[1]. "A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning"
Kırlı K, Karaca S, Dehne HJ, Samwer M, Pan KT, Lenz C, Urlaub H, Görlich D. (2015) eLife, 4:e11466 PubMed
Kırlı K, Karaca S, Dehne HJ, Samwer M, Pan KT, Lenz C, Urlaub H, Görlich D. (2015) eLife, 4:e11466 PubMed
User Input
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.