Show FASTA Format
>tr|Q6DD18|Q6DD18_XENLA Asparagine--tRNA ligase OS=Xenopus laevis OX=8355 GN=nars1.L PE=2 SV=1
MEEEINDITARLKLEEMYISDREGNDSTGDGTKEKPFKTILKAMLVAGKEPFPTFYVDSQ
KENERWDVISKSQVKNNRKLWVREQMKNEAKEKKEAEDNLRREKNLEDAKKIIISNDPSL
PAPVTLKIRELEAYRGQRVKVFGWVHRLRRQGKNLMFIVLRDGTGYLQCVLSDQLCQCYN
GLVLSTESTVAVYGTLNLVPDGKQAPGGHELACDYWELVGLAPAGGADNLLNEESDVDVQ
LNNRHMMIRGENMSKIFKVRSTVIHCFRNHFFDRGYYEVTPPTLVQTQVEGGSTLFKLDY
FGEEAYLTQSSQLYLETCIPALGDSFCIAQSYRAEQSRTRRHLAEYTHIEAECPFMTFEN
LLERLEDLVCDVVDRVLKSPVASLLYDLHPEFKPPKRPFRRMNYSEAITWLKEHDVKKDD
GTYYEFGEDIPEAPERLMTDAINEPILLCRFPAEIKSFYMQRCAEDKRLTESVDVLMPNV
GEIVGGSMRIWDSEELLEGYKREEIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWILN
RHHIRDVCLYPRFVQRCKP
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 912576886305887078208998899999977797210999999739999865897258
Pred: CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECC
AA: MEEEINDITARLKLEEMYISDREGNDSTGDGTKEKPFKTILKAMLVAGKEPFPTFYVDSQ
10 20 30 40 50 60
Conf: 766433223135787533458998743456777676566664310222116330139999
Pred: CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC
AA: KENERWDVISKSQVKNNRKLWVREQMKNEAKEKKEAEDNLRREKNLEDAKKIIISNDPSL
70 80 90 100 110 120
Conf: 986477522243347967999536543211398368999861885134312163100000
Pred: CCCEEEEECCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCHH
AA: PAPVTLKIRELEAYRGQRVKVFGWVHRLRRQGKNLMFIVLRDGTGYLQCVLSDQLCQCYN
130 140 150 160 170 180
Conf: 000034226999999653799999999916897566883158998542344876782000
Pred: HHEECCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
AA: GLVLSTESTVAVYGTLNLVPDGKQAPGGHELACDYWELVGLAPAGGADNLLNEESDVDVQ
190 200 210 220 230 240
Conf: 123200430463036899999999999998643793562899621002445510002557
Pred: CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCC
AA: LNNRHMMIRGENMSKIFKVRSTVIHCFRNHFFDRGYYEVTPPTLVQTQVEGGSTLFKLDY
250 260 270 280 290 300
Conf: 794301211225688641266687665012100100044443653320101368978478
Pred: CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
AA: FGEEAYLTQSSQLYLETCIPALGDSFCIAQSYRAEQSRTRRHLAEYTHIEAECPFMTFEN
310 320 330 340 350 360
Conf: 898777888988999831808866555389999999966588837999999977998999
Pred: HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
AA: LLERLEDLVCDVVDRVLKSPVASLLYDLHPEFKPPKRPFRRMNYSEAITWLKEHDVKKDD
370 380 390 400 410 420
Conf: 984432578888822222111398243046872010002333789998520001016776
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
AA: GTYYEFGEDIPEAPERLMTDAINEPILLCRFPAEIKSFYMQRCAEDKRLTESVDVLMPNV
430 440 450 460 470 480
Conf: 400134200589489997732189999996210245554898998754438899999819
Pred: CEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
AA: GEIVGGSMRIWDSEELLEGYKREEIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWILN
490 500 510 520 530 540
Conf: 9620311346788788889
Pred: CCCCCCCCCCCCCCCCCCC
AA: RHHIRDVCLYPRFVQRCKP
550
Show Conservation Score by AL2CO
1 M -1.000 *
2 E -1.000 *
3 E -1.000 *
4 E -1.000 *
5 I -1.000 *
6 N -1.000 *
7 D -1.000 *
8 I -1.000 *
9 T -1.000 *
10 A -1.000 *
11 R -1.000 *
12 L -1.000 *
13 K -1.000 *
14 L -0.790
15 E -0.954
16 E -0.892
17 M -0.370
18 Y 0.885
19 I 0.494
20 S 0.108
21 D -0.515
22 R -1.026
23 E -1.174
24 G 1.278
25 N -0.911
26 D 1.624
27 S -0.809
28 T -0.956
29 G -0.567
30 D -1.017
31 G 1.581
32 T 0.164
33 K -0.847
34 E -0.905
35 K -0.771
36 P 1.506
37 F 0.585
38 K -0.294
39 T 1.540
40 I -0.122
41 L -0.838
42 K -0.889
43 A 0.395
44 M -0.090
45 L -1.070
46 V -1.068
47 A -1.224
48 G -1.114
49 K -0.952
50 E -0.911
51 P -0.933
52 F -1.122
53 P -1.234
54 T -1.247
55 F -1.198
56 Y -1.182
57 V -1.198
58 D -1.161
59 S -0.909
60 Q -0.934
61 K -0.951
62 E -0.932
63 N -0.893
64 E -1.105
65 R -0.989
66 W 0.096
67 D -0.963
68 V -0.728
69 I -0.170
70 S 0.155
71 K -0.749
72 S 0.076
73 Q -0.181
74 V -0.771
75 K 0.460
76 N -0.377
77 N -1.040
78 R -1.037
79 K -0.413
80 L -1.209
81 W -0.704
82 V -1.100
83 R -0.879
84 E -0.961
85 Q -1.017
86 M -1.041
87 K 0.009
88 N -0.959
89 E -0.830
90 A -0.741
91 K -0.866
92 E -1.053
93 K -1.004
94 K -0.932
95 E -0.826
96 A -0.952
97 E -0.729
98 D -0.815
99 N -1.014
100 L -1.003
101 R -0.847
102 R -0.651
103 E -1.077
104 K -0.773
105 N -0.980
106 L -0.931
107 E -0.464
108 D -0.636
109 A -0.182
110 K -0.729
111 K -0.864
112 I -0.316
113 I -0.914
114 I 0.441
115 S -0.885
116 N -0.556
117 D 0.091
118 P -1.049
119 S -0.792
120 L -0.316
121 P -0.494
122 A -1.123
123 P -0.802
124 V -0.903
125 T -1.041
126 L -0.791
127 K -0.835
128 I -0.061
129 R -1.310
130 E -0.918
131 L -1.128
132 E -1.283
133 A -1.100
134 Y -1.089
135 R -0.879
136 G -0.535
137 Q -0.925
138 R -0.665
139 V 0.335
140 K -0.705
141 V 0.128
142 F -1.171
143 G 0.494
144 W 0.536
145 V 0.061
146 H -0.563
147 R -0.230
148 L -0.860
149 R 0.677
150 R -1.104
151 Q -0.230
152 G 0.479
153 K -0.688
154 N -0.853
155 L 0.016
156 M -0.843
157 F 2.447
158 I 0.285
159 V -0.570
160 L 1.076
161 R -0.342
162 D 1.090
163 G 1.934
164 T -0.232
165 G 0.093
166 Y -0.230
167 L 0.397
168 Q 1.391
169 C -0.095
170 V 0.635
171 L -0.143
172 S -0.958
173 D -0.558
174 Q -0.995
175 L -0.857
176 C -0.847
177 Q -1.074
178 C -0.853
179 Y -0.946
180 N -0.880
181 G -0.719
182 L -1.017
183 V -1.124
184 L 0.177
185 S -0.672
186 T -0.492
187 E 1.213
188 S 0.398
189 T 1.036
190 V 0.389
191 A -1.155
192 V 0.240
193 Y -0.913
194 G 2.447
195 T -0.622
196 L 0.522
197 N -0.994
198 L -0.823
199 V -0.131
200 P 0.298
201 D -0.769
202 G -0.470
203 K -0.442
204 Q -0.848
205 A 0.185
206 P -0.497
207 G -0.346
208 G 0.242
209 H -0.264
210 E 2.447
211 L 0.749
212 A -1.195
213 C 0.264
214 D -0.297
215 Y -0.938
216 W 0.030
217 E -0.934
218 L 0.024
219 V -0.631
220 G -0.450
221 L -1.303
222 A -0.291
223 P -0.481
224 A -0.718
225 G 0.026
226 G -0.744
227 A -0.900
228 D -0.585
229 N -0.852
230 L -0.521
231 L -0.369
232 N -0.411
233 E -1.063
234 E -0.887
235 S -0.553
236 D -0.644
237 V -0.936
238 D -0.464
239 V -0.967
240 Q 0.048
241 L -0.129
242 N 0.819
243 N -0.637
244 R 0.750
245 H 1.942
246 M 0.890
247 M -0.186
248 I 0.120
249 R 2.447
250 G 0.111
251 E -0.474
252 N -0.745
253 M -0.805
254 S -0.601
255 K -0.196
256 I 0.301
257 F 0.102
258 K -0.780
259 V 0.196
260 R 1.500
261 S -0.261
262 T -1.212
263 V -0.343
264 I -0.564
265 H -1.096
266 C -0.082
267 F 0.084
268 R -0.360
269 N -0.996
270 H -0.927
271 F 0.653
272 F -1.171
273 D -0.672
274 R -1.067
275 G -0.779
276 Y -0.251
277 Y -0.961
278 E -0.272
279 V 0.473
280 T -0.673
281 P 0.840
282 P 2.056
283 T -0.215
284 L 0.396
285 V 0.861
286 Q 0.009
287 T 0.471
288 Q 0.150
289 V 0.530
290 E 2.056
291 G 2.056
292 G 0.916
293 S 0.554
294 T 0.475
295 L 1.676
296 F 2.447
297 K -0.702
298 L -0.060
299 D -0.312
300 Y 1.609
301 F 1.296
302 G -0.205
303 E -0.260
304 E -0.776
305 A 0.931
306 Y 0.506
307 L 1.576
308 T 1.376
309 Q 1.377
310 S 1.505
311 S 1.226
312 Q 2.042
313 L 1.628
314 Y 0.855
315 L -0.043
316 E 2.447
317 T 0.596
318 C -0.292
319 I -0.053
320 P -0.473
321 A -0.006
322 L -0.122
323 G 0.557
324 D -0.085
325 S 0.358
326 F 1.545
327 C 0.864
328 I 0.404
329 A -0.460
330 Q 0.000
331 S 1.297
332 Y 1.259
333 R 1.693
334 A 1.695
335 E 2.042
336 Q -0.321
337 S 1.696
338 R -0.163
339 T 2.042
340 R 0.337
341 R 1.694
342 H 1.694
343 L 0.983
344 A 0.456
345 E 1.624
346 Y 1.294
347 T -0.349
348 H 1.570
349 I 0.367
350 E 2.447
351 A 0.381
352 E 2.447
353 C -0.313
354 P -0.222
355 F 0.911
356 M -0.248
357 T -0.417
358 F 0.645
359 E -0.654
360 N 0.060
361 L -0.466
362 L 0.708
363 E -1.147
364 R -0.848
365 L 0.026
366 E 1.704
367 D -1.018
368 L -0.205
369 V 0.233
370 C -0.412
371 D -0.999
372 V -0.015
373 V -0.202
374 D -0.495
375 R -1.058
376 V 0.030
377 L 0.152
378 K -0.706
379 S -0.400
380 P -0.787
381 V -1.377
382 A -1.020
383 S -0.962
384 L -0.590
385 L -0.724
386 Y -1.111
387 D -1.038
388 L -0.756
389 H -0.776
390 P -0.810
391 E -0.911
392 F -0.619
393 K -0.706
394 P -1.099
395 P -0.260
396 K -0.878
397 R -0.791
398 P 0.393
399 F 1.705
400 R -0.737
401 R 0.616
402 M 0.557
403 N -0.663
404 Y 1.698
405 S -0.939
406 E -0.106
407 A 1.430
408 I 1.105
409 T -0.736
410 W -0.526
411 L 1.055
412 K -0.621
413 E -0.489
414 H -0.545
415 D -0.373
416 V -0.225
417 K -0.818
418 K -0.536
419 D -0.234
420 D -0.949
421 G -0.635
422 T -1.156
423 Y -0.995
424 Y -0.116
425 E -0.637
426 F -0.343
427 G 0.874
428 E -0.312
429 D 2.447
430 I 0.665
431 P 0.130
432 E 0.441
433 A -0.415
434 P 0.580
435 E 2.447
436 R 1.141
437 L -0.626
438 M 1.050
439 T 0.354
440 D 0.768
441 A -0.907
442 I 0.127
443 N -0.068
444 E -0.771
445 P 1.173
446 I 0.710
447 L 0.492
448 L 0.560
449 C -0.596
450 R -0.394
451 F 1.311
452 P 2.447
453 A -0.345
454 E -0.640
455 I 0.496
456 K 2.048
457 S 0.669
458 F 2.447
459 Y 2.447
460 M 2.048
461 Q -0.628
462 R -0.117
463 C -0.896
464 A -0.834
465 E -0.834
466 D -0.573
467 K -0.955
468 R -0.870
469 L -0.084
470 T 1.020
471 E 0.140
472 S 0.895
473 V 0.295
474 D 2.447
475 V 0.487
476 L 1.717
477 M 0.265
478 P 2.447
479 N 0.756
480 V 0.911
481 G 2.447
482 E 2.447
483 I 1.039
484 V 0.656
485 G 2.447
486 G 2.048
487 S 1.626
488 M 0.356
489 R 2.447
490 I 0.071
491 W -0.848
492 D -0.567
493 S -1.143
494 E -0.545
495 E -0.841
496 L 1.033
497 L -0.889
498 E -0.622
499 G 0.182
500 Y 0.116
501 K -0.831
502 R -0.593
503 E -0.890
504 E -0.149
505 I 0.660
506 D -0.315
507 P -1.033
508 T -0.517
509 P -0.798
510 Y 1.528
511 Y -0.702
512 W 1.417
513 Y 1.323
514 T -0.211
515 D 1.238
516 Q 1.042
517 R 1.698
518 K -0.093
519 Y 1.373
520 G 2.447
521 T 0.835
522 C -0.628
523 P -0.103
524 H 1.651
525 G 0.867
526 G 2.040
527 Y 1.071
528 G 2.447
529 L 0.738
530 G 2.447
531 L -0.127
532 E 1.827
533 R 2.447
534 F -0.345
535 L 0.186
536 T -0.014
537 W 1.095
538 I 0.324
539 L -0.185
540 N -0.222
541 R -0.536
542 H -0.960
543 H 0.552
544 I 1.543
545 R 1.799
546 D 0.884
547 V 0.390
548 C -0.093
549 L 0.264
550 Y 1.292
551 P 1.042
552 R 2.447
553 F -0.490
554 V -0.600
555 Q -0.628
556 R 0.985
557 C 0.351
558 K -0.626
559 P 2.447
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 359.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MEEEINDITA RLKLEEMYIS DREGNDSTGD GTKEKPFKTI LKAMLVAGKE PFPTFYVDSQ
70 80 90 100 110 120
KENERWDVIS KSQVKNNRKL WVREQMKNEA KEKKEAEDNL RREKNLEDAK KIIISNDPSL
130 140 150 160 170 180
PAPVTLKIRE LEAYRGQRVK VFGWVHRLRR QGKNLMFIVL RDGTGYLQCV LSDQLCQCYN
190 200 210 220 230 240
GLVLSTESTV AVYGTLNLVP DGKQAPGGHE LACDYWELVG LAPAGGADNL LNEESDVDVQ
250 260 270 280 290 300
LNNRHMMIRG ENMSKIFKVR STVIHCFRNH FFDRGYYEVT PPTLVQTQVE GGSTLFKLDY
310 320 330 340 350 360
FGEEAYLTQS SQLYLETCIP ALGDSFCIAQ SYRAEQSRTR RHLAEYTHIE AECPFMTFEN
370 380 390 400 410 420
LLERLEDLVC DVVDRVLKSP VASLLYDLHP EFKPPKRPFR RMNYSEAITW LKEHDVKKDD
430 440 450 460 470 480
GTYYEFGEDI PEAPERLMTD AINEPILLCR FPAEIKSFYM QRCAEDKRLT ESVDVLMPNV
490 500 510 520 530 540
GEIVGGSMRI WDSEELLEGY KREEIDPTPY YWYTDQRKYG TCPHGGYGLG LERFLTWILN
550
RHHIRDVCLY PRFVQRCKP
5XIX (X-Ray,2.25 Å resolution)
4ZYA (X-Ray,1.65 Å resolution)
Asparagine-tRNA ligase is the enzyme responsible for the ligation of Asn to its tRNA. Xenopus Nars1 is identified in proteomics study by Kirli et al. as a CRM1 binder. Export activity is verified as GFP- and GFP-NLS-fusions in an LMB-sensitive manner. No putative NES has been identified yet.
Ref.1A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning, Kirli et al., eLife, 2015
[1]. "A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning"
Kırlı K, Karaca S, Dehne HJ, Samwer M, Pan KT, Lenz C, Urlaub H, Görlich D. (2015)
eLife,
4:e11466
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.