Peroxisomal membrane protein import receptor PEX19
UniProt
Show FASTA Format
>sp|Q07418|PEX19_YEAST Peroxisomal membrane protein import receptor PEX19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PEX19 PE=1 SV=2
MNENEYDNFDDLDDLLDEDPTKLDEAEPDDVQAKGSVYNDSENKEKNAESKDSDGVQVAN
ESEEDPELKEMMVDLQNEFANLMKNNGNENNVKTEDFNKLISALEEAAKVPHQQMEQGCS
SLKSNSTDKGTVNGSNPGFKNIVSNTLDRLKENGNKVDTSLAEETKESQRSGQNNNIDDI
LSQLLDQMVASGGKESAENQFDLKDGEMDDAITKILDQMTSKEVLYEPMKEMRSEFGVWF
QENGENEEHKEKIGTYKRQFNIVDEIVNIYELKDYDELKHKDRVTELLDELEQLGDSPIR
SANSPLKHGNEEEELMKMLEIDGNDPNLGNLDKELTDGCKQQ
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 988778994353000135899999999986457898899888656788889998744689
Pred: CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: MNENEYDNFDDLDDLLDEDPTKLDEAEPDDVQAKGSVYNDSENKEKNAESKDSDGVQVAN
10 20 30 40 50 60
Conf: 999985799999999999999865069999845288999999999851487301100467
Pred: CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCC
AA: ESEEDPELKEMMVDLQNEFANLMKNNGNENNVKTEDFNKLISALEEAAKVPHQQMEQGCS
70 80 90 100 110 120
Conf: 778899988988899973799999999999722112223446654432105899984799
Pred: CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHH
AA: SLKSNSTDKGTVNGSNPGFKNIVSNTLDRLKENGNKVDTSLAEETKESQRSGQNNNIDDI
130 140 150 160 170 180
Conf: 999999998479998654334668760599999999984002000024999887421766
Pred: HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AA: LSQLLDQMVASGGKESAENQFDLKDGEMDDAITKILDQMTSKEVLYEPMKEMRSEFGVWF
190 200 210 220 230 240
Conf: 331999999578995999999999999950588988712187999999999747999334
Pred: HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
AA: QENGENEEHKEKIGTYKRQFNIVDEIVNIYELKDYDELKHKDRVTELLDELEQLGDSPIR
250 260 270 280 290 300
Conf: 314999999974876321058999999999882210547689
Pred: HHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCC
AA: SANSPLKHGNEEEELMKMLEIDGNDPNLGNLDKELTDGCKQQ
310 320 330 340
Show Conservation Score by AL2CO
1 M -1.000 *
2 N -1.000 *
3 E -1.000 *
4 N -1.000 *
5 E -1.000 *
6 Y -1.000 *
7 D -1.000 *
8 N -1.000 *
9 F -1.000 *
10 D -1.000 *
11 D -1.000 *
12 L -1.000 *
13 D -1.000 *
14 D -1.000 *
15 L -1.000 *
16 L -1.000 *
17 D -1.000 *
18 E -1.000 *
19 D -1.000 *
20 P -1.000 *
21 T -1.000 *
22 K -1.000 *
23 L -1.000 *
24 D -1.000 *
25 E -1.000 *
26 A -1.000 *
27 E -1.000 *
28 P -1.000 *
29 D -1.000 *
30 D -1.000 *
31 V -1.000 *
32 Q -0.755
33 A -0.545
34 K -0.606
35 G -0.535
36 S -0.508
37 V -0.689
38 Y -0.814
39 N -0.423
40 D -0.711
41 S -0.731
42 E -0.727
43 N -0.676
44 K -0.647
45 E -0.587
46 K -0.519
47 N -0.780
48 A -0.528
49 E -0.900
50 S -0.768
51 K -0.629
52 D -0.861
53 S -0.776
54 D -0.721
55 G -0.757
56 V -0.794
57 Q -0.865
58 V -0.846
59 A -0.751
60 N -0.767
61 E -0.814
62 S -0.800
63 E -0.758
64 E -0.846
65 D -0.779
66 P -0.716
67 E -0.585
68 L -0.649
69 K -0.513
70 E -0.235
71 M -0.597
72 M -0.603
73 V -0.428
74 D -0.256
75 L 0.079
76 Q -0.564
77 N -0.397
78 E -0.234
79 F -0.037
80 A -0.306
81 N -0.617
82 L -0.711
83 M -0.432
84 K -0.498
85 N -0.577
86 N -0.739
87 G -0.485
88 N -0.819
89 E -0.529
90 N -0.580
91 N -0.606
92 V -0.875
93 K -0.870
94 T -0.921
95 E -0.443
96 D -0.754
97 F -0.752
98 N -0.818
99 K -0.522
100 L -0.791
101 I -0.824
102 S -0.763
103 A -0.774
104 L -0.583
105 E -0.742
106 E -0.564
107 A -0.765
108 A -0.979
109 K -0.907
110 V -0.770
111 P -0.891
112 H -0.895
113 Q -0.756
114 Q -0.970
115 M -0.912
116 E -0.727
117 Q -0.676
118 G -0.830
119 C -0.866
120 S -0.686
121 S -0.834
122 L -0.848
123 K -0.614
124 S -0.664
125 N -0.633
126 S -0.660
127 T -0.785
128 D -0.493
129 K -0.482
130 G -0.600
131 T -0.625
132 V -0.417
133 N -0.360
134 G -0.300
135 S -0.353
136 N -0.295
137 P -0.174
138 G 0.136
139 F 1.475
140 K 0.076
141 N -0.118
142 I -0.440
143 V 1.801
144 S -0.038
145 N 0.236
146 T 1.542
147 L 1.546
148 D 0.086
149 R 0.583
150 L 1.348
151 K 0.127
152 E -0.350
153 N 0.662
154 G -0.016
155 N -0.062
156 K 0.036
157 V 0.059
158 D -0.259
159 T -0.084
160 S -0.120
161 L -0.639
162 A -0.595
163 E 0.080
164 E -0.179
165 T -0.559
166 K -0.393
167 E -1.000 *
168 S -0.401
169 Q -1.000 *
170 R -1.000 *
171 S -1.000 *
172 G -1.000 *
173 Q -0.678
174 N -0.249
175 N -0.555
176 N -0.466
177 I -0.579
178 D 0.112
179 D 0.588
180 I -0.226
181 L 0.720
182 S -0.035
183 Q 0.232
184 L 0.945
185 L -0.300
186 D 0.232
187 Q -0.364
188 M 0.320
189 V -0.291
190 A -0.494
191 S -0.099
192 G -0.271
193 G -0.176
194 K -0.625
195 E -0.478
196 S -0.134
197 A -0.322
198 E -0.313
199 N -0.382
200 Q -0.225
201 F -0.428
202 D -0.405
203 L -0.443
204 K 0.010
205 D 0.042
206 G -0.270
207 E 0.670
208 M 1.027
209 D -0.421
210 D 0.166
211 A 0.889
212 I 1.679
213 T -0.533
214 K 0.026
215 I 1.111
216 L 2.433
217 D 0.089
218 Q 0.263
219 M 1.982
220 T 1.184
221 S 1.152
222 K 2.927
223 E 1.336
224 V 1.486
225 L 3.298
226 Y 2.043
227 E 2.041
228 P 1.865
229 M 2.313
230 K 0.658
231 E 1.884
232 M 1.531
233 R -0.692
234 S -0.313
235 E 0.744
236 F 2.562
237 G 0.654
238 V -0.355
239 W 2.366
240 F 1.472
241 Q -0.299
242 E -0.035
243 N 1.584
244 G 0.031
245 E -0.092
246 N -0.483
247 E -0.227
248 E -0.169
249 H -0.203
250 K -0.321
251 E 0.747
252 K 0.477
253 I -0.355
254 G -0.608
255 T 0.995
256 Y 1.601
257 K -0.779
258 R -0.513
259 Q 4.679
260 F -0.638
261 N -0.534
262 I 0.056
263 V 0.574
264 D -0.379
265 E 0.471
266 I 2.033
267 V 1.015
268 N -0.613
269 I -0.137
270 Y 3.042
271 E 1.922
272 L -0.227
273 K 0.200
274 D -0.055
275 Y -0.245
276 D 0.173
277 E 1.013
278 L -0.393
279 K -0.241
280 H -0.755
281 K -0.449
282 D -0.346
283 R -0.483
284 V 1.920
285 T -0.378
286 E -0.023
287 L 0.645
288 L 2.371
289 D 0.112
290 E 0.311
291 L 2.309
292 E 2.782
293 Q 0.176
294 L -0.051
295 G 4.143
296 D -0.336
297 S 1.967
298 P 5.141
299 I -0.481
300 R 0.683
301 S 0.677
302 A 0.350
303 N -0.462
304 S 0.221
305 P -0.401
306 L -0.141
307 K -0.255
308 H -0.429
309 G -0.075
310 N -0.791
311 E -0.732
312 E -0.138
313 E -0.441
314 E 0.137
315 L -0.474
316 M -0.224
317 K -1.000 *
318 M -1.000 *
319 L -1.000 *
320 E -1.000 *
321 I -1.000 *
322 D -1.000 *
323 G -1.000 *
324 N -1.000 *
325 D -1.000 *
326 P -1.000 *
327 N -1.000 *
328 L -1.000 *
329 G -1.000 *
330 N -1.000 *
331 L -1.000 *
332 D -1.000 *
333 K -1.000 *
334 E -1.000 *
335 L -1.000 *
336 T -1.000 *
337 D -1.000 *
338 G -1.000 *
339 C -1.000 *
340 K -1.000 *
341 Q -1.000 *
342 Q -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 366.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MNENEYDNFD DLDDLLDEDP TKLDEAEPDD VQAKGSVYND SENKEKNAES KDSDGVQVAN
70 80 90 100 110 120
ESEEDPELKE MMVDLQNEFA NLMKNNGNEN NVKTEDFNKL ISALEEAAKV PHQQMEQGCS
130 140 150 160 170 180
SLKSNSTDKG TVNGSNPGFK NIVSNTLDRL KENGNKVDTS LAEETKESQR SGQNNNIDDI
190 200 210 220 230 240
LSQLLDQMVA SGGKESAENQ FDLKDGEMDD AITKILDQMT SKEVLYEPMK EMRSEFGVWF
250 260 270 280 290 300
QENGENEEHK EKIGTYKRQF NIVDEIVNIY ELKDYDELKH KDRVTELLDE LEQLGDSPIR
310 320 330 340
SANSPLKHGN EEEELMKMLE IDGNDPNLGN LDKELTDGCK QQ
Pex19 is required of proper targeting and import of peroxisomal membrane proteins. Pex19 is identified in proteomics study by Kirli et al. as a CRM1 binder. Export activity is verified as GFP- and GFP-NLS-fusions in an LMB-sensitive manner. No putative NES have been identified yet. Human homolog is listed in entry 365.
Ref.1A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning, Kirli et al., eLife, 2015
[1]. "A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning"
Kırlı K, Karaca S, Dehne HJ, Samwer M, Pan KT, Lenz C, Urlaub H, Görlich D. (2015)
eLife,
4:e11466
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
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