Hsp90 co-chaperone Cdc37-like 1
UniProt
Show FASTA Format
>sp|Q7L3B6|CD37L_HUMAN Hsp90 co-chaperone Cdc37-like 1 OS=Homo sapiens OX=9606 GN=CDC37L1 PE=1 SV=1
MEQPWPPPGPWSLPRAEGEAEEESDFDVFPSSPRCPQLPGGGAQMYSHGIELACQKQKEF
VKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQR
EKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIRHFGMLSRWDDSQR
FLSDHPYLVCEETAKYLILWCFHLEAEKKGALMEQIAHQAVVMQFIMEMAKNCNVDPRGC
FRLFFQKAKAEEEGYFEAFKNELEAFKSRVRLYSQSQSFQPMTVQNHVPHSGVGSIGLLE
SLPQNPDYLQYSISTALCSLNSVVHKEDDEPKMMDTV
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 999999999999988778876678888899999999999998541305589997756564
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AA: MEQPWPPPGPWSLPRAEGEAEEESDFDVFPSSPRCPQLPGGGAQMYSHGIELACQKQKEF
10 20 30 40 50 60
Conf: 224578641199999974451356884437788975444899876599999999997324
Pred: HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AA: VKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQR
70 80 90 100 110 120
Conf: 310557767665444564334678999980456516889964998864204789488899
Pred: HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AA: EKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIRHFGMLSRWDDSQR
130 140 150 160 170 180
Conf: 898399754755573999999999785444678779999999999999987278898503
Pred: HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AA: FLSDHPYLVCEETAKYLILWCFHLEAEKKGALMEQIAHQAVVMQFIMEMAKNCNVDPRGC
190 200 210 220 230 240
Conf: 578766663302558999999999999999988642036755323789999876421122
Pred: HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AA: FRLFFQKAKAEEEGYFEAFKNELEAFKSRVRLYSQSQSFQPMTVQNHVPHSGVGSIGLLE
250 260 270 280 290 300
Conf: 4699972001253446677888888768544312379
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: SLPQNPDYLQYSISTALCSLNSVVHKEDDEPKMMDTV
310 320 330
Show Conservation Score by AL2CO
1 M -1.000 *
2 E -1.000 *
3 Q -1.000 *
4 P -1.000 *
5 W -1.000 *
6 P -1.000 *
7 P -1.000 *
8 P -1.000 *
9 G -1.000 *
10 P -1.000 *
11 W -1.000 *
12 S -1.000 *
13 L -1.000 *
14 P -1.000 *
15 R -1.000 *
16 A -1.000 *
17 E -1.000 *
18 G -1.000 *
19 E -1.000 *
20 A -1.000 *
21 E 1.040
22 E -0.763
23 E 0.137
24 S 0.313
25 D 0.661
26 F 0.084
27 D 0.385
28 V -0.346
29 F -0.546
30 P 0.336
31 S 0.745
32 S -1.032
33 P -0.743
34 R -0.671
35 C -0.789
36 P -0.571
37 Q -0.466
38 L -0.179
39 P -0.408
40 G -0.777
41 G -0.792
42 G -0.957
43 A 0.224
44 Q 0.187
45 M -0.275
46 Y 1.027
47 S -0.280
48 H 0.155
49 G 0.523
50 I 0.538
51 E 0.366
52 L -0.659
53 A -1.076
54 C -0.982
55 Q 0.430
56 K -0.009
57 Q -0.560
58 K 0.588
59 E -0.091
60 F -0.625
61 V -1.143
62 K -0.303
63 S -0.909
64 S -0.920
65 V -1.224
66 A -0.697
67 C -1.255
68 K -0.758
69 W -0.637
70 N -0.137
71 L 0.381
72 A -0.812
73 E 0.808
74 A -0.460
75 Q 0.548
76 Q -0.716
77 K 0.429
78 L -0.135
79 G -0.609
80 S -0.813
81 L -0.551
82 A -0.607
83 L -1.202
84 H -0.973
85 N -1.060
86 S -0.959
87 E -0.493
88 S -0.744
89 L -1.772
90 D -0.261
91 Q -1.184
92 E -0.637
93 H -1.514
94 A -0.984
95 K -0.362
96 A -0.537
97 Q -0.304
98 T -0.813
99 A -1.166
100 V -1.104
101 S -0.708
102 E 0.171
103 L 0.128
104 R -0.180
105 Q -1.081
106 R -0.967
107 E -0.542
108 E -0.548
109 E -0.560
110 W -0.452
111 R -0.746
112 Q -0.991
113 K -0.126
114 E 0.025
115 E -0.612
116 A -0.277
117 L 0.322
118 V -1.184
119 Q -0.865
120 R -0.714
121 E 0.971
122 K 0.127
123 M -1.044
124 C -1.479
125 L 0.850
126 W -0.132
127 S 0.516
128 T -0.526
129 D 0.772
130 A -0.473
131 I 0.616
132 S -0.314
133 K -0.128
134 D 0.168
135 V 0.645
136 F -0.106
137 N 0.165
138 K 0.077
139 S 1.372
140 F -1.174
141 I 0.699
142 N 0.999
143 Q -0.945
144 D -1.110
145 K -1.134
146 R -0.973
147 K -0.996
148 D -0.761
149 T -0.649
150 E -0.285
151 D -0.741
152 E -1.318
153 D -0.691
154 K -1.007
155 S -1.543
156 E -0.922
157 S -0.857
158 F -0.489
159 M -0.829
160 Q -0.849
161 K -0.477
162 Y -0.625
163 E -0.452
164 Q -0.648
165 K -0.709
166 I 0.217
167 R 0.356
168 H -0.742
169 F 0.793
170 G 1.432
171 M -0.209
172 L 0.314
173 S -0.232
174 R 0.676
175 W -0.595
176 D -0.996
177 D 0.389
178 S 1.233
179 Q -0.777
180 R -0.841
181 F 1.409
182 L 2.253
183 S -0.517
184 D 0.248
185 H -0.006
186 P -0.031
187 Y -0.347
188 L 2.321
189 V 1.506
190 C 0.164
191 E 2.333
192 E -0.358
193 T -0.084
194 A 0.173
195 K 0.257
196 Y -0.132
197 L 2.353
198 I 0.543
199 L 0.444
200 W -0.778
201 C 1.759
202 F 1.089
203 H -0.002
204 L -0.081
205 E 0.763
206 A 0.273
207 E 0.104
208 K -0.071
209 K 0.584
210 G -1.273
211 A -0.139
212 L -0.425
213 M 0.920
214 E -0.691
215 Q -0.469
216 I 0.486
217 A 2.096
218 H 1.326
219 Q 2.600
220 A 0.245
221 V 1.308
222 V 0.371
223 M 2.142
224 Q 1.344
225 F 1.612
226 I 1.782
227 M 0.209
228 E 0.655
229 M 1.457
230 A 2.941
231 K 1.100
232 N -0.596
233 C -0.763
234 N -0.124
235 V -1.038
236 D 0.270
237 P 1.313
238 R 1.216
239 G 0.331
240 C 0.023
241 F 1.678
242 R -0.658
243 L -0.826
244 F 3.838
245 F 3.262
246 Q -0.276
247 K 2.228
248 A 0.507
249 K -0.356
250 A -0.931
251 E -0.684
252 E -0.438
253 E -0.844
254 G -0.573
255 Y 1.215
256 F -1.081
257 E -0.284
258 A -0.813
259 F 4.087
260 K -0.953
261 N -0.445
262 E 3.059
263 L 2.017
264 E -0.357
265 A -0.265
266 F 1.853
267 K -0.520
268 S -0.930
269 R 2.392
270 V 2.400
271 R 0.926
272 L -0.910
273 Y 0.062
274 S 0.559
275 Q 0.234
276 S -0.835
277 Q -0.379
278 S -1.114
279 F -1.374
280 Q -0.175
281 P -0.127
282 M -0.570
283 T -0.800
284 V -0.665
285 Q -0.109
286 N -0.363
287 H -0.722
288 V -0.640
289 P -0.139
290 H -0.219
291 S 0.068
292 G -0.295
293 V 0.608
294 G 0.884
295 S 0.341
296 I -1.125
297 G 1.873
298 L 0.139
299 L -0.125
300 E 0.269
301 S 0.314
302 L 1.878
303 P 1.595
304 Q 0.038
305 N -1.000 *
306 P -1.000 *
307 D -1.000 *
308 Y -1.020
309 L 0.764
310 Q 2.113
311 Y -0.429
312 S 1.243
313 I 0.648
314 S 0.470
315 T 1.155
316 A -1.000 *
317 L -1.000 *
318 C -1.000 *
319 S -1.000 *
320 L -1.000 *
321 N -1.000 *
322 S -1.000 *
323 V -1.000 *
324 V -1.000 *
325 H -1.000 *
326 K -1.000 *
327 E -1.000 *
328 D -1.000 *
329 D -1.000 *
330 E -1.000 *
331 P -1.000 *
332 K -1.000 *
333 M -1.000 *
334 M -1.000 *
335 D -1.000 *
336 T -1.000 *
337 V -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 368.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MEQPWPPPGP WSLPRAEGEA EEESDFDVFP SSPRCPQLPG GGAQMYSHGI ELACQKQKEF
70 80 90 100 110 120
VKSSVACKWN LAEAQQKLGS LALHNSESLD QEHAKAQTAV SELRQREEEW RQKEEALVQR
130 140 150 160 170 180
EKMCLWSTDA ISKDVFNKSF INQDKRKDTE DEDKSESFMQ KYEQKIRHFG MLSRWDDSQR
190 200 210 220 230 240
FLSDHPYLVC EETAKYLILW CFHLEAEKKG ALMEQIAHQA VVMQFIMEMA KNCNVDPRGC
250 260 270 280 290 300
FRLFFQKAKA EEEGYFEAFK NELEAFKSRV RLYSQSQSFQ PMTVQNHVPH SGVGSIGLLE
310 320 330
SLPQNPDYLQ YSISTALCSL NSVVHKEDDE PKMMDTV
Cdc37L is a co-chaperone for Hsp70/Hsp90. It is identified in proteomics study by Kirli et al. as a CRM1 binder. Export activity is verified as GFP- and GFP-NLS-fusions in an LMB-sensitive manner. No putative NES have been identified yet.
Ref.1A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning, Kirli et al., eLife, 2015
[1]. "A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning"
Kırlı K, Karaca S, Dehne HJ, Samwer M, Pan KT, Lenz C, Urlaub H, Görlich D. (2015)
eLife,
4:e11466
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.