Summary for UBR5 (NES ID: 380)

Full Name
E3 ubiquitin-protein ligase UBR5     UniProt    
Alternative Names
HECT-type E3 ubiquitin transferase UBR5, Hyperplastic discs protein homolog (hHYD)   
Organism
Homo sapiens (Human)    
Experimental Evidence for CRM1-mediated Export
Unknown
Mutations That Affect Nuclear Export
Unknown
Mutations That Affect CRM1 Binding
Unknown
Functional Export Signals
Undetermined
Secondary Structure of Export Signal
Unknown
Other Residues Important for Export
Unknown
Sequence
Show FASTA Format Show Domain Info by CDD Show Secondary Structure by PSIPRED Show Conservation Score by AL2CO 
        10         20         30         40         50         60 
MTSIHFVVHP LPGTEDQLND RLREVSEKLN KYNLNSHPPL NVLEQATIKQ CVVGPNHAAF 

        70         80         90        100        110        120 
LLEDGRVCRI GFSVQPDRLE LGKPDNNDGS KLNSNSGAGR TSRPGRTSDS PWFLSGSETL 

       130        140        150        160        170        180 
GRLAGNTLGS RWSSGVGGSG GGSSGRSSAG ARDSRRQTRV IRTGRDRGSG LLGSQPQPVI 

       190        200        210        220        230        240 
PASVIPEELI SQAQVVLQGK SRSVIIRELQ RTNLDVNLAV NNLLSRDDED GDDGDDTASE 

       250        260        270        280        290        300 
SYLPGEDLMS LLDADIHSAH PSVIIDADAM FSEDISYFGY PSFRRSSLSR LGSSRVLLLP 

       310        320        330        340        350        360 
LERDSELLRE RESVLRLRER RWLDGASFDN ERGSTSKEGE PNLDKKNTPV QSPVSLGEDL 

       370        380        390        400        410        420 
QWWPDKDGTK FICIGALYSE LLAVSSKGEL YQWKWSESEP YRNAQNPSLH HPRATFLGLT 

       430        440        450        460        470        480 
NEKIVLLSAN SIRATVATEN NKVATWVDET LSSVASKLEH TAQTYSELQG ERIVSLHCCA 

       490        500        510        520        530        540 
LYTCAQLENS LYWWGVVPFS QRKKMLEKAR AKNKKPKSSA GISSMPNITV GTQVCLRNNP 

       550        560        570        580        590        600 
LYHAGAVAFS ISAGIPKVGV LMESVWNMND SCRFQLRSPE SLKNMEKASK TTEAKPESKQ 

       610        620        630        640        650        660 
EPVKTEMGPP PSPASTCSDA SSIASSASMP YKRRRSTPAP KEEEKVNEEQ WSLREVVFVE 

       670        680        690        700        710        720 
DVKNVPVGKV LKVDGAYVAV KFPGTSSNTN CQNSSGPDAD PSSLLQDCRL LRIDELQVVK 

       730        740        750        760        770        780 
TGGTPKVPDC FQRTPKKLCI PEKTEILAVN VDSKGVHAVL KTGNWVRYCI FDLATGKAEQ 

       790        800        810        820        830        840 
ENNFPTSSIA FLGQNERNVA IFTAGQESPI ILRDGNGTIY PMAKDCMGGI RDPDWLDLPP 

       850        860        870        880        890        900 
ISSLGMGVHS LINLPANSTI KKKAAVIIMA VEKQTLMQHI LRCDYEACRQ YLMNLEQAVV 

       910        920        930        940        950        960 
LEQNLQMLQT FISHRCDGNR NILHACVSVC FPTSNKETKE EEEAERSERN TFAERLSAVE 

       970        980        990       1000       1010       1020 
AIANAISVVS SNGPGNRAGS SSSRSLRLRE MMRRSLRAAG LGRHEAGASS SDHQDPVSPP 

      1030       1040       1050       1060       1070       1080 
IAPPSWVPDP PAMDPDGDID FILAPAVGSL TTAATGTGQG PSTSTIPGPS TEPSVVESKD 

      1090       1100       1110       1120       1130       1140 
RKANAHFILK LLCDSVVLQP YLRELLSAKD ARGMTPFMSA VSGRAYPAAI TILETAQKIA 

      1150       1160       1170       1180       1190       1200 
KAEISSSEKE EDVFMGMVCP SGTNPDDSPL YVLCCNDTCS FTWTGAEHIN QDIFECRTCG 

      1210       1220       1230       1240       1250       1260 
LLESLCCCTE CARVCHKGHD CKLKRTSPTA YCDCWEKCKC KTLIAGQKSA RLDLLYRLLT 

      1270       1280       1290       1300       1310       1320 
ATNLVTLPNS RGEHLLLFLV QTVARQTVEH CQYRPPRIRE DRNRKTASPE DSDMPDHDLE 

      1330       1340       1350       1360       1370       1380 
PPRFAQLALE RVLQDWNALK SMIMFGSQEN KDPLSASSRI GHLLPEEQVY LNQQSGTIRL 

      1390       1400       1410       1420       1430       1440 
DCFTHCLIVK CTADILLLDT LLGTLVKELQ NKYTPGRREE AIAVTMRFLR SVARVFVILS 

      1450       1460       1470       1480       1490       1500 
VEMASSKKKN NFIPQPIGKC KRVFQALLPY AVEELCNVAE SLIVPVRMGI ARPTAPFTLA 

      1510       1520       1530       1540       1550       1560 
STSIDAMQGS EELFSVEPLP PRPSSDQSSS SSQSQSSYII RNPQQRRISQ SQPVRGRDEE 

      1570       1580       1590       1600       1610       1620 
QDDIVSADVE EVEVVEGVAG EEDHHDEQEE HGEENAEAEG QHDEHDEDGS DMELDLLAAA 

      1630       1640       1650       1660       1670       1680 
ETESDSESNH SNQDNASGRR SVVTAATAGS EAGASSVPAF FSEDDSQSND SSDSDSSSSQ 

      1690       1700       1710       1720       1730       1740 
SDDIEQETFM LDEPLERTTN SSHANGAAQA PRSMQWAVRN TQHQRAASTA PSSTSTPAAS 

      1750       1760       1770       1780       1790       1800 
SAGLIYIDPS NLRRSGTIST SAAAAAAALE ASNASSYLTS ASSLARAYSI VIRQISDLMG 

      1810       1820       1830       1840       1850       1860 
LIPKYNHLVY SQIPAAVKLT YQDAVNLQNY VEEKLIPTWN WMVSIMDSTE AQLRYGSALA 

      1870       1880       1890       1900       1910       1920 
SAGDPGHPNH PLHASQNSAR RERMTAREEA SLRTLEGRRR ATLLSARQGM MSARGDFLNY 

      1930       1940       1950       1960       1970       1980 
ALSLMRSHND EHSDVLPVLD VCSLKHVAYV FQALIYWIKA MNQQTTLDTP QLERKRTREL 

      1990       2000       2010       2020       2030       2040 
LELGIDNEDS EHENDDDTNQ SATLNDKDDD SLPAETGQNH PFFRRSDSMT FLGCIPPNPF 

      2050       2060       2070       2080       2090       2100 
EVPLAEAIPL ADQPHLLQPN ARKEDLFGRP SQGLYSSSAS SGKCLMEVTV DRNCLEVLPT 

      2110       2120       2130       2140       2150       2160 
KMSYAANLKN VMNMQNRQKK EGEEQPVLPE ETESSKPGPS AHDLAAQLKS SLLAEIGLTE 

      2170       2180       2190       2200       2210       2220 
SEGPPLTSFR PQCSFMGMVI SHDMLLGRWR LSLELFGRVF MEDVGAEPGS ILTELGGFEV 

      2230       2240       2250       2260       2270       2280 
KESKFRREME KLRNQQSRDL SLEVDRDRDL LIQQTMRQLN NHFGRRCATT PMAVHRVKVT 

      2290       2300       2310       2320       2330       2340 
FKDEPGEGSG VARSFYTAIA QAFLSNEKLP NLECIQNANK GTHTSLMQRL RNRGERDRER 

      2350       2360       2370       2380       2390       2400 
EREREMRRSS GLRAGSRRDR DRDFRRQLSI DTRPFRPASE GNPSDDPEPL PAHRQALGER 

      2410       2420       2430       2440       2450       2460 
LYPRVQAMQP AFASKITGML LELSPAQLLL LLASEDSLRA RVDEAMELII AHGRENGADS 

      2470       2480       2490       2500       2510       2520 
ILDLGLVDSS EKVQQENRKR HGSSRSVVDM DLDDTDDGDD NAPLFYQPGK RGFYTPRPGK 

      2530       2540       2550       2560       2570       2580 
NTEARLNCFR NIGRILGLCL LQNELCPITL NRHVIKVLLG RKVNWHDFAF FDPVMYESLR 

      2590       2600       2610       2620       2630       2640 
QLILASQSSD ADAVFSAMDL AFAIDLCKEE GGGQVELIPN GVNIPVTPQN VYEYVRKYAE 

      2650       2660       2670       2680       2690       2700 
HRMLVVAEQP LHAMRKGLLD VLPKNSLEDL TAEDFRLLVN GCGEVNVQML ISFTSFNDES 

      2710       2720       2730       2740       2750       2760 
GENAEKLLQF KRWFWSIVEK MSMTERQDLV YFWTSSPSLP ASEEGFQPMP SITIRPPDDQ 

      2770       2780       2790                                  
HLPTANTCIS RLYVPLYSSK QILKQKLLLA IKTKNFGFV
3D Structures in PDB
1I2T (X-Ray,1.04 Å resolution)
2QHO (X-Ray,1.85 Å resolution)
3PT3 (X-Ray,1.97 Å resolution)
Comments
UBR5 is the E3 ubiquitin-protein ligase for the N-end rule pathways. Three putative NESs (classical NES: 2206-2224 and reverse NES: 209-227, 1607-1605) were identified by in silico prediction methods in Sendino et al. using possible XPO1/CRM1-cancer exportome proteins identified previously as putative CRM1-binders by Kirli et al. (not all proteins were validated in full-length). These putative NESs were tested using Rev(1.4)-GFP assay which all showed very weak to no activity. Only 209-227 was tested in SRVB/A reporter with co-expression with CRM1, and showed no change in localization. Therefore, no CRM1-dependency has been demonstrated for any of the NESs. Ref.1A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning, Kirli et al., eLife, 2015 Ref.2Using a Simple Cellular Assay to Map NES Motifs in Cancer-Related Proteins, Gain Insight into CRM1-Mediated NES Export, and Search for NES-Harboring Micropeptides, Sendino et al., Int J Mol Sci, 2020
References
[1]. "A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning"
Kırlı K, Karaca S, Dehne HJ, Samwer M, Pan KT, Lenz C, Urlaub H, Görlich D. (2015) eLife, 4:e11466 PubMed
[2]. "Using a Simple Cellular Assay to Map NES Motifs in Cancer-Related Proteins, Gain Insight into CRM1-Mediated NES Export, and Search for NES-Harboring Micropeptides"
Sendino M, Omaetxebarria MJ, Prieto G, Rodriguez JA. (2020) Int J Mol Sci, 21(17):E6341 PubMed
User Input
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