Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
UniProt
Show FASTA Format
>sp|Q9UBK2|PRGC1_HUMAN Peroxisome proliferator-activated receptor gamma coactivator 1-alpha OS=Homo sapiens OX=9606 GN=PPARGC1A PE=1 SV=1
MAWDMCNQDSESVWSDIECAALVGEDQPLCPDLPELDLSELDVNDLDTDSFLGGLKWCSD
QSEIISNQYNNEPSNIFEKIDEENEANLLAVLTETLDSLPVDEDGLPSFDALTDGDVTTD
NEASPSSMPDGTPPPQEAEEPSLLKKLLLAPANTQLSYNECSGLSTQNHANHNHRIRTNP
AIVKTENSWSNKAKSICQQQKPQRRPCSELLKYLTTNDDPPHTKPTENRNSSRDKCTSKK
KSHTQSQSQHLQAKPTTLSLPLTPESPNDPKGSPFENKTIERTLSVELSGTAGLTPPTTP
PHKANQDNPFRASPKLKSSCKTVVPPPSKKPRYSESSGTQGNNSTKKGPEQSELYAQLSK
SSVLTGGHEERKTKRPSLRLFGDHDYCQSINSKTEILINISQELQDSRQLENKDVSSDWQ
GQICSSTDSDQCYLRETLEASKQVSPCSTRKQLQDQEIRAELNKHFGHPSQAVFDDEADK
TGELRDSDFSNEQFSKLPMFINSGLAMDGLFDDSEDESDKLSYPWDGTQSYSLFNVSPSC
SSFNSPCRDSVSPPKSLFSQRPQRMRSRSRSFSRHRSCSRSPYSRSRSRSPGSRSSSRSC
YYYESSHYRHRTHRNSPLYVRSRSRSPYSRRPRYDSYEEYQHERLKREEYRREYEKRESE
RAKQRERQRQKAIEERRVIYVGKIRPDTTRTELRDRFEVFGEIEECTVNLRDDGDSYGFI
TYRYTCDAFAALENGYTLRRSNETDFELYFCGRKQFFKSNYADLDSNSDDFDPASTKSKY
DSLDFDSLLKEAQRSLRR
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 953223567622222000011137888899999978977678887873221244533678
Pred: CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: MAWDMCNQDSESVWSDIECAALVGEDQPLCPDLPELDLSELDVNDLDTDSFLGGLKWCSD
10 20 30 40 50 60
Conf: 871305789999971222022145787999999961589889899987667666887766
Pred: CCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AA: QSEIISNQYNNEPSNIFEKIDEENEANLLAVLTETLDSLPVDEDGLPSFDALTDGDVTTD
70 80 90 100 110 120
Conf: 899999999999999888741011131145688867622125876444457789877898
Pred: CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: NEASPSSMPDGTPPPQEAEEPSLLKKLLLAPANTQLSYNECSGLSTQNHANHNHRIRTNP
130 140 150 160 170 180
Conf: 643444556778846634679897898211236779999999998777688887464334
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: AIVKTENSWSNKAKSICQQQKPQRRPCSELLKYLTTNDDPPHTKPTENRNSSRDKCTSKK
190 200 210 220 230 240
Conf: 477653110022699999999999999999999998786464453234578778999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: KSHTQSQSQHLQAKPTTLSLPLTPESPNDPKGSPFENKTIERTLSVELSGTAGLTPPTTP
250 260 270 280 290 300
Conf: 998897999998978789976448999999987789888999989879850346686311
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
AA: PHKANQDNPFRASPKLKSSCKTVVPPPSKKPRYSESSGTQGNNSTKKGPEQSELYAQLSK
310 320 330 340 350 360
Conf: 557778821002689977887898731124632002100255788899763367999744
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
AA: SSVLTGGHEERKTKRPSLRLFGDHDYCQSINSKTEILINISQELQDSRQLENKDVSSDWQ
370 380 390 400 410 420
Conf: 554458897620021100123577999987556887699996317899987523622124
Pred: CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
AA: GQICSSTDSDQCYLRETLEASKQVSPCSTRKQLQDQEIRAELNKHFGHPSQAVFDDEADK
430 440 450 460 470 480
Conf: 688878987411125896433799877987668757778544458999754334458999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: TGELRDSDFSNEQFSKLPMFINSGLAMDGLFDDSEDESDKLSYPWDGTQSYSLFNVSPSC
490 500 510 520 530 540
Conf: 999999989899999866778778766788888866678999888888999999999987
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: SSFNSPCRDSVSPPKSLFSQRPQRMRSRSRSFSRHRSCSRSPYSRSRSRSPGSRSSSRSC
550 560 570 580 590 600
Conf: 667999864676789988667777899999999996467888774344666555355567
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AA: YYYESSHYRHRTHRNSPLYVRSRSRSPYSRRPRYDSYEEYQHERLKREEYRREYEKRESE
610 620 630 640 650 660
Conf: 899999999862113078998414999876888543100220122475402479832478
Pred: HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCEEEE
AA: RAKQRERQRQKAIEERRVIYVGKIRPDTTRTELRDRFEVFGEIEECTVNLRDDGDSYGFI
670 680 690 700 710 720
Conf: 985003599973315332357999802411553223354667898999999998555645
Pred: EEEECHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: TYRYTCDAFAALENGYTLRRSNETDFELYFCGRKQFFKSNYADLDSNSDDFDPASTKSKY
730 740 750 760 770 780
Conf: 545758999999987219
Pred: CCCCHHHHHHHHHHHHCC
AA: DSLDFDSLLKEAQRSLRR
790
Show Conservation Score by AL2CO
1 M -1.000 *
2 A -1.000 *
3 W -1.000 *
4 D -1.000 *
5 M -1.000 *
6 C -1.000 *
7 N -1.000 *
8 Q -1.000 *
9 D -1.000 *
10 S -1.000 *
11 E -1.000 *
12 S -1.000 *
13 V -1.000 *
14 W -1.000 *
15 S -1.000 *
16 D -1.000 *
17 I -1.000 *
18 E -1.000 *
19 C -1.000 *
20 A -1.000 *
21 A -1.000 *
22 L -1.000 *
23 V -1.000 *
24 G -1.000 *
25 E -1.000 *
26 D -1.000 *
27 Q -1.000 *
28 P -1.000 *
29 L -1.000 *
30 C -1.000 *
31 P -1.000 *
32 D -1.000 *
33 L -1.000 *
34 P -1.000 *
35 E -1.000 *
36 L -1.000 *
37 D -1.000 *
38 L -1.000 *
39 S -1.000 *
40 E -1.000 *
41 L -1.000 *
42 D -1.000 *
43 V -1.000 *
44 N -1.000 *
45 D -1.000 *
46 L -1.000 *
47 D -1.000 *
48 T -1.000 *
49 D -1.000 *
50 S -1.000 *
51 F -1.000 *
52 L -1.000 *
53 G -1.000 *
54 G -1.000 *
55 L -1.000 *
56 K -1.000 *
57 W -1.000 *
58 C -1.000 *
59 S -1.000 *
60 D -1.000 *
61 Q -1.000 *
62 S -1.000 *
63 E -1.000 *
64 I -1.000 *
65 I -1.000 *
66 S -1.000 *
67 N -1.000 *
68 Q -1.000 *
69 Y -1.000 *
70 N -1.000 *
71 N -1.000 *
72 E -1.000 *
73 P -1.000 *
74 S -1.000 *
75 N -1.000 *
76 I -1.000 *
77 F -1.000 *
78 E -1.000 *
79 K -1.000 *
80 I -1.000 *
81 D -1.000 *
82 E -1.000 *
83 E -1.000 *
84 N -1.000 *
85 E -1.000 *
86 A -1.000 *
87 N -1.000 *
88 L -1.000 *
89 L -1.000 *
90 A -1.000 *
91 V -1.000 *
92 L -1.000 *
93 T -1.000 *
94 E -1.000 *
95 T -1.000 *
96 L -1.000 *
97 D -1.000 *
98 S -1.000 *
99 L -1.000 *
100 P 1.432
101 V 0.137
102 D 1.475
103 E -0.331
104 D -0.105
105 G 0.399
106 L 0.617
107 P 0.702
108 S 0.136
109 F -0.090
110 D 0.044
111 A 0.347
112 L 0.125
113 T -0.356
114 D 0.554
115 G 0.028
116 D 0.032
117 V -0.493
118 T -0.506
119 T -0.756
120 D -0.444
121 N -0.345
122 E -0.370
123 A -0.801
124 S -0.276
125 P -0.422
126 S -0.147
127 S 0.157
128 M -0.855
129 P -0.011
130 D -0.382
131 G -0.717
132 T -0.486
133 P 0.278
134 P -0.259
135 P -0.357
136 Q -0.164
137 E -0.075
138 A -0.311
139 E -0.494
140 E -0.505
141 P -0.555
142 S -0.432
143 L -0.693
144 L -0.963
145 K -0.698
146 K -0.723
147 L -0.869
148 L -0.720
149 L -0.874
150 A -0.490
151 P -0.367
152 A -0.577
153 N -0.933
154 T -0.632
155 Q -0.504
156 L -0.526
157 S -0.533
158 Y -0.830
159 N -0.444
160 E -0.697
161 C -0.805
162 S -0.852
163 G -0.662
164 L -0.784
165 S -0.372
166 T -0.401
167 Q -0.668
168 N -0.808
169 H -0.600
170 A -0.316
171 N -0.793
172 H -0.713
173 N -0.843
174 H -0.871
175 R -0.243
176 I -1.009
177 R -0.573
178 T -0.367
179 N -0.761
180 P -0.342
181 A -0.535
182 I -1.087
183 V -0.548
184 K -0.500
185 T -0.831
186 E -0.413
187 N -0.765
188 S -0.669
189 W -0.748
190 S -0.433
191 N -0.742
192 K 0.157
193 A -0.534
194 K -0.890
195 S -0.464
196 I -0.532
197 C -0.716
198 Q -0.974
199 Q -0.671
200 Q -0.504
201 K -0.676
202 P 0.118
203 Q -0.590
204 R -0.426
205 R -0.331
206 P 0.409
207 C -0.100
208 S -0.210
209 E -0.296
210 L 0.311
211 L -0.643
212 K -0.187
213 Y -0.880
214 L -0.429
215 T -0.678
216 T -0.847
217 N -0.883
218 D -0.697
219 D -0.258
220 P -0.667
221 P -0.976
222 H -0.742
223 T -0.760
224 K -0.888
225 P -0.920
226 T -1.011
227 E -0.615
228 N -0.920
229 R -0.844
230 N -1.079
231 S -0.499
232 S -0.763
233 R -1.146
234 D -0.872
235 K -0.945
236 C -0.963
237 T -0.944
238 S -0.704
239 K -0.884
240 K -1.076
241 K -0.595
242 S -0.958
243 H -1.069
244 T -1.102
245 Q -0.820
246 S -0.552
247 Q -0.950
248 S -1.137
249 Q -1.121
250 H -0.856
251 L -0.817
252 Q -0.634
253 A -0.206
254 K -0.470
255 P 0.278
256 T -0.519
257 T -0.628
258 L -0.103
259 S -0.314
260 L -0.054
261 P -0.164
262 L -0.424
263 T -0.740
264 P -0.430
265 E -0.575
266 S -0.081
267 P 0.015
268 N -0.661
269 D -0.107
270 P -0.666
271 K 0.044
272 G -0.428
273 S -0.103
274 P 0.764
275 F -0.511
276 E 0.428
277 N 0.288
278 K 0.590
279 T -0.089
280 I -0.401
281 E 1.149
282 R 0.051
283 T -0.383
284 L 0.639
285 S 0.374
286 V 0.295
287 E 0.876
288 L 0.985
289 S 0.610
290 G 0.851
291 T 0.524
292 A 1.348
293 G 0.132
294 L 0.751
295 T 0.813
296 P 0.802
297 P 1.762
298 T 0.142
299 T 0.471
300 P 0.536
301 P 1.064
302 H 0.001
303 K 0.489
304 A -0.553
305 N -0.549
306 Q -0.134
307 D 0.346
308 N -0.225
309 P 0.478
310 F -0.251
311 R 0.420
312 A 0.054
313 S 0.166
314 P -0.153
315 K -0.369
316 L -0.882
317 K -0.981
318 S -0.410
319 S -0.444
320 C -0.801
321 K -0.853
322 T -0.877
323 V -0.662
324 V -0.479
325 P -0.695
326 P -0.274
327 P 0.158
328 S -0.671
329 K -0.695
330 K -0.308
331 P -0.210
332 R -0.849
333 Y -1.311
334 S -0.631
335 E -0.905
336 S -0.334
337 S -0.935
338 G -0.549
339 T -1.101
340 Q -0.185
341 G -0.563
342 N -0.902
343 N -0.382
344 S -0.316
345 T -1.031
346 K 0.388
347 K -0.051
348 G -0.436
349 P 1.230
350 E 0.392
351 Q 0.359
352 S 0.374
353 E 2.145
354 L 2.747
355 Y 1.311
356 A 1.444
357 Q 0.774
358 L 1.572
359 S 0.097
360 K 0.510
361 S -0.224
362 S -0.361
363 V -0.713
364 L -0.621
365 T -0.481
366 G -0.583
367 G -0.707
368 H -0.640
369 E -0.274
370 E -0.223
371 R -0.630
372 K -0.671
373 T -0.960
374 K 0.287
375 R 0.139
376 P 0.244
377 S -0.932
378 L -0.102
379 R -0.103
380 L -0.214
381 F 0.278
382 G 1.198
383 D 2.611
384 H 1.852
385 D 1.299
386 Y 1.851
387 C 1.903
388 Q 0.753
389 S 0.364
390 I -0.504
391 N -0.594
392 S -0.061
393 K 0.081
394 T -0.575
395 E -0.440
396 I -0.923
397 L -1.058
398 I -0.993
399 N -0.856
400 I -0.600
401 S -0.507
402 Q -0.632
403 E -0.852
404 L -0.399
405 Q -0.604
406 D -0.454
407 S -0.884
408 R -0.379
409 Q -0.074
410 L -0.529
411 E -0.322
412 N -1.014
413 K -0.288
414 D -0.680
415 V -0.754
416 S -0.923
417 S -0.981
418 D -0.882
419 W -1.030
420 Q -0.856
421 G -1.075
422 Q -0.516
423 I -1.051
424 C -0.887
425 S -0.602
426 S -0.713
427 T -1.017
428 D -0.805
429 S -0.854
430 D -0.998
431 Q -0.863
432 C -1.418
433 Y -1.161
434 L -1.093
435 R -0.588
436 E -0.405
437 T -0.647
438 L -1.015
439 E -0.616
440 A -0.980
441 S -1.240
442 K -0.898
443 Q -0.732
444 V -1.223
445 S -0.917
446 P -0.665
447 C -0.942
448 S -0.675
449 T -0.498
450 R -0.291
451 K -0.616
452 Q -0.049
453 L 0.232
454 Q -0.250
455 D 0.079
456 Q -0.585
457 E 0.236
458 I 0.172
459 R 0.518
460 A -0.105
461 E 0.076
462 L 1.423
463 N 0.648
464 K 0.503
465 H 0.104
466 F 0.384
467 G 0.698
468 H -1.025
469 P 0.004
470 S -0.729
471 Q -0.367
472 A -0.048
473 V 0.493
474 F -0.947
475 D -0.580
476 D -0.401
477 E -0.821
478 A -0.770
479 D -0.668
480 K -0.502
481 T -1.000 *
482 G -1.000 *
483 E -1.000 *
484 L -1.000 *
485 R -1.000 *
486 D -1.000 *
487 S -1.000 *
488 D -1.000 *
489 F -1.000 *
490 S -1.000 *
491 N -0.807
492 E -0.919
493 Q -1.076
494 F -0.516
495 S -0.408
496 K -0.403
497 L -0.262
498 P -0.074
499 M -0.493
500 F -0.650
501 I -1.000 *
502 N -1.000 *
503 S -1.000 *
504 G -1.000 *
505 L -1.000 *
506 A -1.000 *
507 M -1.000 *
508 D -0.816
509 G -0.831
510 L -0.578
511 F -0.542
512 D 0.527
513 D -0.088
514 S -0.572
515 E -0.484
516 D -0.335
517 E -0.313
518 S -0.401
519 D 0.401
520 K -0.602
521 L -0.513
522 S -0.193
523 Y -0.161
524 P -0.052
525 W -1.000 *
526 D -1.000 *
527 G -1.000 *
528 T -0.350
529 Q -0.257
530 S -0.487
531 Y -0.785
532 S -0.490
533 L -0.165
534 F -0.486
535 N -0.647
536 V -0.984
537 S -0.498
538 P -0.064
539 S -0.716
540 C -0.104
541 S -0.213
542 S -0.663
543 F -0.935
544 N -0.692
545 S -0.064
546 P 0.364
547 C -0.592
548 R -0.155
549 D -0.774
550 S -0.544
551 V -0.803
552 S -0.309
553 P -0.149
554 P -0.804
555 K -0.879
556 S -0.805
557 L -0.718
558 F -1.224
559 S -0.626
560 Q -1.125
561 R -0.631
562 P -0.562
563 Q -1.145
564 R -0.819
565 M -0.881
566 R -0.667
567 S -0.499
568 R -0.357
569 S 0.148
570 R -0.447
571 S -0.652
572 F -0.638
573 S -0.844
574 R -0.605
575 H -0.521
576 R -0.682
577 S 0.321
578 C -0.460
579 S -0.126
580 R -0.189
581 S -0.356
582 P -0.004
583 Y -0.294
584 S -0.427
585 R -0.224
586 S 0.158
587 R -0.584
588 S 0.219
589 R -0.320
590 S 0.255
591 P 0.334
592 G -0.927
593 S -0.533
594 R -0.291
595 S -0.453
596 S -0.201
597 S -0.124
598 R 0.412
599 S -0.433
600 C -0.674
601 Y -0.211
602 Y -0.806
603 Y -0.988
604 E -0.637
605 S -0.578
606 S -0.783
607 H -0.508
608 Y -1.194
609 R -0.307
610 H -0.528
611 R -0.351
612 T -0.589
613 H -0.529
614 R -0.741
615 N -0.334
616 S -0.121
617 P -1.000 *
618 L -1.000 *
619 Y -1.000 *
620 V -0.973
621 R -0.210
622 S -0.144
623 R -0.604
624 S -0.065
625 R 0.169
626 S 0.461
627 P 0.098
628 Y -0.726
629 S -0.427
630 R -0.080
631 R 0.617
632 P -0.509
633 R 0.012
634 Y -0.070
635 D -0.234
636 S -0.083
637 Y -0.167
638 E 0.177
639 E -0.231
640 Y -0.983
641 Q -0.058
642 H -0.002
643 E -0.426
644 R -0.785
645 L -0.423
646 K -0.317
647 R 0.275
648 E 0.156
649 E -0.031
650 Y -0.270
651 R -0.593
652 R -0.491
653 E -0.811
654 Y -0.455
655 E -0.072
656 K -0.079
657 R -0.395
658 E -0.402
659 S -0.846
660 E -0.275
661 R -0.489
662 A -0.790
663 K -0.502
664 Q 0.821
665 R -0.021
666 E 0.067
667 R 0.607
668 Q 0.426
669 R -0.019
670 Q 0.198
671 K 1.461
672 A 0.536
673 I 0.105
674 E 0.715
675 E 1.871
676 R 0.840
677 R 1.786
678 V 0.982
679 I 0.873
680 Y 1.443
681 V 2.256
682 G 0.366
683 K 1.336
684 I 1.861
685 R 0.305
686 P 0.050
687 D 0.302
688 T 0.251
689 T 1.635
690 R 0.728
691 T -0.155
692 E 2.136
693 L 2.404
694 R 1.386
695 D 0.181
696 R 2.455
697 F 3.811
698 E 1.838
699 V 0.891
700 F 2.906
701 G 3.811
702 E 1.935
703 I 1.890
704 E 1.208
705 E 2.558
706 C 2.478
707 T -0.219
708 V 1.907
709 N 0.468
710 L -0.090
711 R 0.618
712 D -0.456
713 D 0.242
714 G 3.811
715 D 0.787
716 S 0.344
717 Y 0.495
718 G 3.243
719 F 0.803
720 I 2.243
721 T 2.414
722 Y 2.049
723 R 1.695
724 Y 0.064
725 T 0.980
726 C 1.261
727 D 1.738
728 A 3.811
729 F 0.998
730 A 1.125
731 A 2.619
732 L 1.647
733 E 1.115
734 N 1.122
735 G 3.104
736 Y -0.169
737 T 0.581
738 L 1.749
739 R 0.753
740 R 0.448
741 S 0.111
742 N 0.519
743 E 2.612
744 T 1.130
745 D -0.296
746 F 2.009
747 E 0.808
748 L 1.442
749 Y 0.513
750 F 0.566
751 C 0.796
752 G 1.366
753 R -0.074
754 K 1.493
755 Q 0.694
756 F 1.306
757 F 0.495
758 K 1.343
759 S 0.501
760 N 0.355
761 Y 1.717
762 A 0.923
763 D 1.880
764 L 2.005
765 D 2.388
766 S 0.916
767 N 0.496
768 S -0.331
769 D 1.537
770 D 1.731
771 F -0.003
772 D -0.108
773 P 1.411
774 A -0.339
775 S 0.562
776 T 0.182
777 K 2.252
778 S 1.381
779 K 3.811
780 Y 1.816
781 D 1.058
782 S 1.206
783 L 1.748
784 D 3.811
785 F 3.811
786 D 3.811
787 S 2.552
788 L 3.811
789 L 3.811
790 K 2.011
791 E 2.578
792 A 3.811
793 Q 2.332
794 R -0.005
795 S 1.608
796 L 2.363
797 R 1.465
798 R 3.811
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 403.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MAWDMCNQDS ESVWSDIECA ALVGEDQPLC PDLPELDLSE LDVNDLDTDS FLGGLKWCSD
70 80 90 100 110 120
QSEIISNQYN NEPSNIFEKI DEENEANLLA VLTETLDSLP VDEDGLPSFD ALTDGDVTTD
130 140 150 160 170 180
NEASPSSMPD GTPPPQEAEE PSLLKKLLLA PANTQLSYNE CSGLSTQNHA NHNHRIRTNP
190 200 210 220 230 240
AIVKTENSWS NKAKSICQQQ KPQRRPCSEL LKYLTTNDDP PHTKPTENRN SSRDKCTSKK
250 260 270 280 290 300
KSHTQSQSQH LQAKPTTLSL PLTPESPNDP KGSPFENKTI ERTLSVELSG TAGLTPPTTP
310 320 330 340 350 360
PHKANQDNPF RASPKLKSSC KTVVPPPSKK PRYSESSGTQ GNNSTKKGPE QSELYAQLSK
370 380 390 400 410 420
SSVLTGGHEE RKTKRPSLRL FGDHDYCQSI NSKTEILINI SQELQDSRQL ENKDVSSDWQ
430 440 450 460 470 480
GQICSSTDSD QCYLRETLEA SKQVSPCSTR KQLQDQEIRA ELNKHFGHPS QAVFDDEADK
490 500 510 520 530 540
TGELRDSDFS NEQFSKLPMF INSGLAMDGL FDDSEDESDK LSYPWDGTQS YSLFNVSPSC
550 560 570 580 590 600
SSFNSPCRDS VSPPKSLFSQ RPQRMRSRSR SFSRHRSCSR SPYSRSRSRS PGSRSSSRSC
610 620 630 640 650 660
YYYESSHYRH RTHRNSPLYV RSRSRSPYSR RPRYDSYEEY QHERLKREEY RREYEKRESE
670 680 690 700 710 720
RAKQRERQRQ KAIEERRVIY VGKIRPDTTR TELRDRFEVF GEIEECTVNL RDDGDSYGFI
730 740 750 760 770 780
TYRYTCDAFA ALENGYTLRR SNETDFELYF CGRKQFFKSN YADLDSNSDD FDPASTKSKY
790
DSLDFDSLLK EAQRSLRR
3B1M (X-Ray,1.60 Å resolution)
Corum et al. showed that myc-tagged PGC-1α is accumulated in nucleus of HUVECs upon LMB treatment. Atk3 knockdown had no apparent effect on modifications of PGC-1α and caused CRM1 overexpression instead and subsequent cytoplasmic shift in PGC-1α localization. Binding of PGC-1α and CRM1 is illustrated by co-immunoprecipitation. 2 putatives NESs were identified using NES Finder and mutations to either causes nuclear accumulation of GFP-PGC-1α. The first NES is the same as the one mapped in mouse PGC-1α, which can be found in entry #160. PPARG is also found modulate CRM1 stability and PGC-1α localization via Akt3, consistent with previous study (Galbraith et al.).
Ref.1AKT3 controls mitochondrial biogenesis and autophagy via regulation of the major nuclear export protein CRM-1, Corum et al., FASEB J, 2014 Ref.2PPAR-gamma induced AKT3 expression increases levels of mitochondrial biogenesis driving prostate cancer., Galbraith et al., Oncogene, 2021
[1]. "AKT3 controls mitochondrial biogenesis and autophagy via regulation of the major nuclear export protein CRM-1"
Corum DG, Tsichlis PN, Muise-Helmericks RC. (2014)
FASEB J,
Jan:28(1):395-407
PubMed[2]. "PPAR-gamma induced AKT3 expression increases levels of mitochondrial biogenesis driving prostate cancer."
Galbraith LCA, Mui E, Nixon C, Hedley A, Strachan D, MacKay G, Sumpton D, Sansom OJ, Leung HY, Ahmad I. (2021)
Oncogene,
Apr:40(13):2355-2366
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.