WD repeat-containing protein 20
UniProt
Show FASTA Format
>sp|Q8TBZ3|WDR20_HUMAN WD repeat-containing protein 20 OS=Homo sapiens OX=9606 GN=WDR20 PE=1 SV=2
MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSG
NGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLV
GFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNVE
HTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQ
DGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFVDCRVIARG
HGHKSWVSVVAFDPYTTSVEEGDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDS
RPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTT
PGNSVPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKR
NHSMGHISSKSSDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLI
FLEDCIVTACQEGFICTWGRPGKVVSFNP
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 976789985011122012052222127999888999999999999994320001699999
Pred: CCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
AA: MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSG
10 20 30 40 50 60
Conf: 997059850547999960797453458996532111147997444333344554203786
Pred: CCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
AA: NGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLV
70 80 90 100 110 120
Conf: 431541254345300121002432102466510333026997525752246814653077
Pred: EECCCCEEEECCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEECC
AA: GFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNVE
130 140 150 160 170 180
Conf: 998999964400013674479705788888984202316875415743889980478740
Pred: CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEEC
AA: HTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQ
190 200 210 220 230 240
Conf: 990799730322343334533066037875699734872466770799964224488624
Pred: CCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCEEEECC
AA: DGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFVDCRVIARG
250 260 270 280 290 300
Conf: 786321366754563122247998888999511123334587788888778888999999
Pred: CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: HGHKSWVSVVAFDPYTTSVEEGDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDS
310 320 330 340 350 360
Conf: 995055423777887504742266442388998875632567888899998899998899
Pred: CCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: RPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTT
370 380 390 400 410 420
Conf: 999999999999898999888899998668876433455553344454334466557744
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: PGNSVPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKR
430 440 450 460 470 480
Conf: 446776677888877776534568766559888878777865303444100123301553
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEE
AA: NHSMGHISSKSSDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLI
490 500 510 520 530 540
Conf: 30441565405782898537886558899
Pred: ECCCCEEEEECCCCEEEECCCCCCCCCCC
AA: FLEDCIVTACQEGFICTWGRPGKVVSFNP
550 560
Show Conservation Score by AL2CO
1 M -1.000 *
2 A -1.000 *
3 T -1.000 *
4 E -1.000 *
5 G -1.000 *
6 G -1.000 *
7 G -1.000 *
8 K -1.000 *
9 E -1.000 *
10 M -1.000 *
11 N -1.000 *
12 E -1.000 *
13 I -1.000 *
14 K -1.000 *
15 T -1.000 *
16 Q -1.000 *
17 F -1.000 *
18 T -1.000 *
19 T -1.000 *
20 R 1.314
21 E 2.026
22 G 2.154
23 L -0.507
24 Y 0.598
25 K 0.476
26 L -1.000 *
27 L -1.000 *
28 P -1.000 *
29 H -0.509
30 S 0.022
31 E 0.390
32 Y -0.841
33 S -0.303
34 R 0.478
35 P 0.064
36 N -0.173
37 R 0.288
38 V -0.009
39 P 0.057
40 F -0.711
41 N -0.060
42 S -0.519
43 Q -0.448
44 G -0.426
45 S 0.081
46 N -0.146
47 P -0.199
48 V 0.516
49 R -0.236
50 V 0.350
51 S 0.629
52 F -0.232
53 V 0.200
54 N -0.606
55 L -0.455
56 N -0.283
57 D 0.064
58 Q -0.676
59 S -0.865
60 G -0.269
61 N -0.751
62 G -0.160
63 D -0.777
64 R -0.083
65 L 0.707
66 C 0.574
67 F 0.419
68 N 2.208
69 V -0.445
70 G 0.726
71 R 0.270
72 E 0.165
73 L 1.623
74 Y -0.428
75 F 0.775
76 Y -0.187
77 I -0.432
78 Y -0.470
79 K -0.096
80 G 0.531
81 V -0.953
82 R -0.702
83 K -0.299
84 A -0.432
85 A -0.740
86 D -0.647
87 L -0.645
88 S -0.452
89 K -0.029
90 P -0.343
91 I 0.022
92 D -0.503
93 K -0.510
94 R -0.369
95 I -0.436
96 Y 0.486
97 K -0.423
98 G 0.416
99 T 0.273
100 Q -0.251
101 P -0.178
102 T 1.150
103 C 1.073
104 H 1.488
105 D 0.230
106 F 1.255
107 N 1.677
108 H -0.723
109 L -0.757
110 T 0.264
111 A -0.471
112 T 0.277
113 A -0.698
114 E 0.117
115 S 0.007
116 V -0.680
117 S -0.591
118 L 1.167
119 L 1.442
120 V 1.095
121 G 2.902
122 F 1.218
123 S 0.151
124 A 0.019
125 G 0.856
126 Q 0.796
127 V 0.583
128 Q 0.195
129 L 0.604
130 I 0.076
131 D 1.312
132 P 0.789
133 I -0.524
134 K 0.043
135 K -0.112
136 E -0.221
137 T -0.266
138 S -0.464
139 K 0.169
140 L 0.828
141 F 0.566
142 N 0.216
143 E -0.210
144 E 0.313
145 R -0.194
146 L -0.580
147 I -0.119
148 D -0.428
149 K -0.462
150 S 0.768
151 R -0.247
152 V 1.274
153 T -0.457
154 C -0.393
155 V 1.515
156 K -0.451
157 W 0.877
158 V 0.575
159 P 0.934
160 G -0.112
161 S 0.046
162 E -0.201
163 S -0.476
164 L -0.608
165 F 0.655
166 L 0.630
167 V 0.626
168 A 0.552
169 H -0.333
170 S -0.709
171 S 1.273
172 G 1.823
173 N -0.569
174 M 0.471
175 Y -0.280
176 L -0.357
177 Y -0.436
178 N -0.354
179 V -0.870
180 E -0.723
181 H -0.274
182 T -0.832
183 C -0.569
184 G -0.151
185 T -0.380
186 T -0.462
187 A -0.380
188 P -0.572
189 H -0.618
190 Y -0.597
191 Q -0.739
192 L -1.045
193 L -0.784
194 K -0.706
195 Q -0.776
196 G -0.284
197 E -0.584
198 S -0.997
199 F -0.948
200 A -1.100
201 V -0.928
202 H -0.707
203 T -0.458
204 C -0.986
205 K -0.546
206 S -0.425
207 K -0.655
208 S -0.533
209 T -0.422
210 R -0.879
211 N 0.169
212 P 0.035
213 L 0.196
214 L -0.454
215 K -0.684
216 W 0.350
217 T -0.415
218 V 0.557
219 G 0.174
220 E -0.026
221 G -0.414
222 A -0.495
223 L 1.963
224 N -0.392
225 E -0.146
226 F 1.723
227 A 0.906
228 F 2.775
229 S 2.313
230 P 0.340
231 D 1.470
232 G -0.104
233 K -0.516
234 F -0.429
235 L 1.960
236 A 2.675
237 C 0.793
238 V 1.357
239 S 0.474
240 Q -0.598
241 D 2.685
242 G 0.442
243 F -0.118
244 L 1.952
245 R 1.661
246 V 2.219
247 F 1.048
248 N 0.830
249 F 0.198
250 D -0.684
251 S -0.037
252 V -0.114
253 E 0.004
254 L 0.121
255 H -0.535
256 G -0.557
257 T -0.546
258 M 0.265
259 K -0.781
260 S 2.278
261 Y 1.403
262 F 0.069
263 G 1.118
264 G 0.010
265 L 0.751
266 L -0.239
267 C 1.956
268 V 1.056
269 C 0.875
270 W 3.053
271 S 2.832
272 P 0.687
273 D 3.387
274 G 1.416
275 K -0.252
276 Y 0.145
277 I 2.450
278 V 2.269
279 T 1.473
280 G 2.377
281 G 2.793
282 E 0.232
283 D 4.402
284 D 0.557
285 L 1.001
286 V 2.638
287 T 0.930
288 V 2.568
289 W 2.268
290 S 0.304
291 F 0.041
292 V -0.940
293 D 1.027
294 C 0.072
295 R -0.273
296 V 0.254
297 I 1.256
298 A 0.219
299 R 0.584
300 G 1.707
301 H 0.106
302 G 2.977
303 H 3.051
304 K -0.082
305 S 1.435
306 W 0.146
307 V 2.932
308 S -0.222
309 V -0.151
310 V 3.699
311 A 0.694
312 F 2.992
313 D 3.737
314 P 0.400
315 Y 1.356
316 T -0.256
317 T -0.728
318 S -1.002
319 V -0.366
320 E -0.690
321 E 0.626
322 G -0.886
323 D -1.000 *
324 P -1.000 *
325 M -1.000 *
326 E -1.000 *
327 F -1.000 *
328 S -1.000 *
329 G -0.452
330 S -0.430
331 D -0.181
332 E -0.615
333 D -0.552
334 F -0.875
335 Q -0.790
336 D -0.666
337 L -0.865
338 L -0.881
339 H -1.040
340 F -0.787
341 G -0.629
342 R -0.598
343 D -0.712
344 R -0.756
345 A -0.901
346 N -0.742
347 S -0.520
348 T 0.051
349 Q -0.833
350 S -0.706
351 R -0.867
352 L -0.981
353 S -0.438
354 K -0.859
355 R -0.067
356 N -0.984
357 S -0.250
358 T -0.491
359 D -0.513
360 S -0.748
361 R -0.637
362 P -0.463
363 V -0.890
364 S -0.526
365 V -0.955
366 T -0.644
367 Y 0.446
368 R 0.615
369 F 0.265
370 G 0.618
371 S 2.462
372 V 0.926
373 G 0.901
374 Q -0.733
375 D 1.982
376 T -0.187
377 Q -0.349
378 L 1.631
379 C 0.490
380 L 1.432
381 W 1.735
382 D 2.005
383 L -0.247
384 T -0.130
385 E -0.690
386 D -0.121
387 I -0.423
388 L 0.152
389 F -0.952
390 P -0.493
391 H -0.236
392 Q -0.392
393 P -0.966
394 L -0.962
395 S -0.951
396 R -0.662
397 A -0.734
398 R -0.768
399 T -0.401
400 H -0.530
401 T -0.506
402 N -0.818
403 V -0.763
404 M -0.890
405 N -0.745
406 A -0.769
407 T -0.890
408 S -0.683
409 P -0.827
410 P -0.472
411 A -0.772
412 G -0.934
413 S -0.855
414 N -1.092
415 G -1.103
416 N -1.093
417 S -0.911
418 V -0.857
419 T -0.960
420 T -0.881
421 P -1.100
422 G -0.991
423 N -0.856
424 S -0.913
425 V -1.078
426 P -0.987
427 P -0.975
428 P -0.908
429 L -1.226
430 P -1.074
431 R -0.814
432 S -0.887
433 N -0.521
434 S -0.816
435 L -0.719
436 P -0.925
437 H -0.687
438 S -0.749
439 A -0.981
440 V -0.975
441 S -0.898
442 N -1.085
443 A -1.027
444 G -1.029
445 S -0.754
446 K -0.921
447 S -0.620
448 S -0.731
449 V -0.851
450 M -0.925
451 D -0.712
452 G -0.694
453 A -0.893
454 I -0.889
455 A -0.843
456 S -0.813
457 G -0.496
458 V -0.924
459 S -0.416
460 K -0.735
461 F -0.406
462 A -0.858
463 T -0.135
464 L -0.821
465 S -0.392
466 L -0.692
467 H -0.891
468 D -0.455
469 R -0.685
470 K -0.710
471 E -0.709
472 R -0.664
473 H -0.814
474 H -0.984
475 E -0.695
476 K -0.799
477 D -0.623
478 H -0.511
479 K -0.463
480 R -0.408
481 N -0.740
482 H -0.905
483 S -0.646
484 M -0.910
485 G -0.441
486 H -0.963
487 I -0.529
488 S -0.811
489 S -0.619
490 K -0.552
491 S -0.120
492 S -0.543
493 D -1.000 *
494 K -1.000 *
495 L -1.000 *
496 N -1.000 *
497 L -1.000 *
498 V -1.000 *
499 T -1.000 *
500 K -1.000 *
501 T -1.000 *
502 K -1.000 *
503 T -0.937
504 D -0.546
505 P -1.000 *
506 A -1.000 *
507 K -1.000 *
508 T -1.000 *
509 L -1.000 *
510 G -1.000 *
511 T -1.000 *
512 P -1.000 *
513 L -1.000 *
514 C -1.000 *
515 P -1.000 *
516 R -1.000 *
517 M -1.000 *
518 E -1.000 *
519 D -1.000 *
520 V -1.000 *
521 P -1.000 *
522 L -1.000 *
523 L -1.000 *
524 E -1.000 *
525 P -1.000 *
526 L -1.000 *
527 I -1.000 *
528 C -1.000 *
529 K -1.000 *
530 K -1.000 *
531 I -1.000 *
532 A -1.000 *
533 H -1.000 *
534 E -1.000 *
535 R -1.000 *
536 L -1.000 *
537 T -1.000 *
538 V -1.000 *
539 L -1.000 *
540 I -1.000 *
541 F -1.000 *
542 L -1.000 *
543 E -1.000 *
544 D -1.000 *
545 C -1.000 *
546 I -1.000 *
547 V -1.000 *
548 T -1.000 *
549 A -1.000 *
550 C -1.000 *
551 Q -1.000 *
552 E -1.000 *
553 G -1.000 *
554 F -1.000 *
555 I -1.000 *
556 C -1.000 *
557 T -1.000 *
558 W -1.000 *
559 G -1.000 *
560 R -1.000 *
561 P -1.000 *
562 G -1.000 *
563 K -1.000 *
564 V -1.000 *
565 V -1.000 *
566 S -1.000 *
567 F -1.000 *
568 N -1.000 *
569 P -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 404.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MATEGGGKEM NEIKTQFTTR EGLYKLLPHS EYSRPNRVPF NSQGSNPVRV SFVNLNDQSG
70 80 90 100 110 120
NGDRLCFNVG RELYFYIYKG VRKAADLSKP IDKRIYKGTQ PTCHDFNHLT ATAESVSLLV
130 140 150 160 170 180
GFSAGQVQLI DPIKKETSKL FNEERLIDKS RVTCVKWVPG SESLFLVAHS SGNMYLYNVE
190 200 210 220 230 240
HTCGTTAPHY QLLKQGESFA VHTCKSKSTR NPLLKWTVGE GALNEFAFSP DGKFLACVSQ
250 260 270 280 290 300
DGFLRVFNFD SVELHGTMKS YFGGLLCVCW SPDGKYIVTG GEDDLVTVWS FVDCRVIARG
310 320 330 340 350 360
HGHKSWVSVV AFDPYTTSVE EGDPMEFSGS DEDFQDLLHF GRDRANSTQS RLSKRNSTDS
370 380 390 400 410 420
RPVSVTYRFG SVGQDTQLCL WDLTEDILFP HQPLSRARTH TNVMNATSPP AGSNGNSVTT
430 440 450 460 470 480
PGNSVPPPLP RSNSLPHSAV SNAGSKSSVM DGAIASGVSK FATLSLHDRK ERHHEKDHKR
490 500 510 520 530 540
NHSMGHISSK SSDKLNLVTK TKTDPAKTLG TPLCPRMEDV PLLEPLICKK IAHERLTVLI
550 560
FLEDCIVTAC QEGFICTWGR PGKVVSFNP
WDR20 is a WD repeat containing protein that functions to regulate deubiquitinases. Olazabal-Herrero et al. reported that WDR20 regulates the cellular localization of USP12 and their cellular localization is LMB sensitive. Deletion analysis on a disordered region (394-509) of WDR20 led to identification of a putative NES in 450-468, predicted by Wregex. This peptide is active in Rev(1.4)-GFP nuclear export assay. Mutations to the NES in full length YFP-WDR20 increased nuclear accumulation, as well as the complex of YFP-USP12(with artificial NLS)/UAF1-mRFP/myc-WDR2.
Ref.1WDR20 regulates shuttling of the USP12 deubiquitinase complex between the plasma membrane, cytoplasm and nucleus., OlazabalHerrero et al., Eur J Cell Biol, 2019
[1]. "WDR20 regulates shuttling of the USP12 deubiquitinase complex between the plasma membrane, cytoplasm and nucleus."
Olazabal-Herrero A, Sendino M, Arganda-Carreras I, Rodríguez JA (2019)
Eur J Cell Biol,
Jan:98(1):12-26
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.