Metal-binding regulatory protein Cuf1
UniProt
Show FASTA Format
>gi|1175405|sp|Q09728.1|CUF1_SCHPO RecName: Full=Metal-binding regulatory protein cuf1
MVVINNVKMACMKCIRGHRSSTCKHNDRELFPIRPKGRPISQCEKCRIARITRHLHVKCTCNSRKKGSKC
STSSTTDLDSSSASNSSCSIPSSISEKLLPRDNVKTHCPKRSASCCGKKPDVMPLKINLESQTDFMGMPL
QSQRPHSESYRMLPEPEKFKSEYGYPSQFLPIEKLTSNVAYPPNYNNYLKSPYQQPTNFPPEIQYNYSHS
PQHSIQEAEEAAVYGPPVYRSGYQILYNNNTDSIAAAAATHDLYPQPDVPLTFAMLADGNYVPLPSSTNT
YGPSNSYGYEININESTNHVDSSYLPHPIQLSNYFTLPSSCAQADAACQCGDNCECLGCLTHPNNATTLA
ALNHISALEKETISHTDLHHTFKHEVNSSNNYELTNDELAASSPLYTSSSVPPSHITTGST
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 947839042013211253468887789321003799999865633553302101356301
Pred: CEEECCEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
AA: MVVINNVKMACMKCIRGHRSSTCKHNDRELFPIRPKGRPISQCEKCRIARITRHLHVKCT
10 20 30 40 50 60
Conf: 588877887778998878999889998899998765568999987879899876589999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: CNSRKKGSKCSTSSTTDLDSSSASNSSCSIPSSISEKLLPRDNVKTHCPKRSASCCGKKP
70 80 90 100 110 120
Conf: 988854557888756899988889999987789999888888899987899655578989
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: DVMPLKINLESQTDFMGMPLQSQRPHSESYRMLPEPEKFKSEYGYPSQFLPIEKLTSNVA
130 140 150 160 170 180
Conf: 899998889999999999999767889999978744322225799998998766678999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: YPPNYNNYLKSPYQQPTNFPPEIQYNYSHSPQHSIQEAEEAAVYGPPVYRSGYQILYNNN
190 200 210 220 230 240
Conf: 985220146999999999998424698999778999999899999998888988989899
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: TDSIAAAAATHDLYPQPDVPLTFAMLADGNYVPLPSSTNTYGPSNSYGYEININESTNHV
250 260 270 280 290 300
Conf: 999999876566778899988999998789999668798789998324999997201111
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AA: DSSYLPHPIQLSNYFTLPSSCAQADAACQCGDNCECLGCLTHPNNATTLAALNHISALEK
310 320 330 340 350 360
Conf: 366789888887554578876556410002588888888879999988999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: ETISHTDLHHTFKHEVNSSNNYELTNDELAASSPLYTSSSVPPSHITTGST
370 380 390 400 410
Show Conservation Score by AL2CO
1 M -1.000 *
2 V 1.820
3 V 1.193
4 I 1.089
5 N 0.801
6 N 1.253
7 V 0.410
8 K 2.915
9 M 1.388
10 A 2.720
11 C 2.647
12 M 0.482
13 K 0.683
14 C 4.170
15 I 2.432
16 R 2.422
17 G 3.483
18 H 4.170
19 R 3.483
20 S 1.775
21 S 2.154
22 T 0.754
23 C 4.170
24 K 0.557
25 H 4.170
26 N 0.044
27 D 1.135
28 R 1.905
29 E 0.334
30 L 2.985
31 F 0.231
32 P 0.596
33 I 2.669
34 R 1.130
35 P 1.306
36 K 1.846
37 G 4.170
38 R 4.170
39 P 4.170
40 I 0.495
41 S 0.578
42 Q 0.140
43 C 1.743
44 E 0.321
45 K -0.089
46 C 1.265
47 R 0.610
48 I -0.004
49 A -0.199
50 R 0.581
51 I 0.403
52 T 0.149
53 R 0.506
54 H -0.047
55 L -0.296
56 H 0.260
57 V -0.076
58 K 0.407
59 C 1.053
60 T -0.485
61 C 2.077
62 N -0.162
63 S -0.219
64 R -0.273
65 K -0.173
66 K -0.332
67 G -0.356
68 S -0.353
69 K -0.421
70 C -0.386
71 S -0.581
72 T -0.273
73 S -0.387
74 S -0.304
75 T -0.363
76 T -0.518
77 D -0.428
78 L -0.515
79 D -0.303
80 S -0.493
81 S -0.455
82 S -0.552
83 A -0.399
84 S -0.461
85 N -0.420
86 S -0.518
87 S -0.436
88 C -0.311
89 S -0.053
90 I -0.461
91 P -0.026
92 S -0.070
93 S -0.515
94 I -0.418
95 S -0.179
96 E -0.345
97 K -0.267
98 L -0.503
99 L -0.431
100 P -0.188
101 R -0.385
102 D -0.445
103 N -0.554
104 V -0.537
105 K -0.431
106 T -0.285
107 H -0.424
108 C -0.340
109 P -0.274
110 K -0.341
111 R -0.450
112 S -0.176
113 A -0.570
114 S -0.335
115 C -0.469
116 C -0.384
117 G -0.388
118 K -0.609
119 K -0.298
120 P -0.400
121 D -0.446
122 V -0.361
123 M -0.634
124 P -0.427
125 L -0.622
126 K -0.536
127 I -0.608
128 N -0.506
129 L -0.569
130 E -0.413
131 S -0.339
132 Q -0.527
133 T -0.497
134 D -0.273
135 F -0.557
136 M -0.498
137 G -0.461
138 M -0.536
139 P -0.102
140 L -0.685
141 Q -0.553
142 S -0.448
143 Q -0.582
144 R -0.395
145 P -0.149
146 H -0.735
147 S -0.454
148 E -0.396
149 S -0.562
150 Y -0.771
151 R -0.512
152 M -0.585
153 L -0.475
154 P -0.458
155 E -0.660
156 P -0.153
157 E -0.573
158 K -0.438
159 F -0.727
160 K -0.520
161 S -0.478
162 E -0.382
163 Y -0.723
164 G -0.526
165 Y -0.498
166 P -0.235
167 S -0.605
168 Q -0.431
169 F -0.602
170 L -0.413
171 P -0.296
172 I -0.636
173 E -0.345
174 K -0.693
175 L -0.625
176 T -0.653
177 S -0.526
178 N -0.534
179 V -0.603
180 A -0.372
181 Y -0.738
182 P -0.521
183 P -0.202
184 N -0.408
185 Y -0.690
186 N -0.444
187 N -0.394
188 Y -0.659
189 L -0.683
190 K -0.599
191 S -0.239
192 P -0.272
193 Y -0.738
194 Q -0.531
195 Q -0.476
196 P -0.397
197 T -0.626
198 N -0.610
199 F -0.567
200 P -0.331
201 P -0.487
202 E -0.642
203 I -0.685
204 Q -0.528
205 Y -0.695
206 N -0.615
207 Y -0.657
208 S -0.405
209 H -0.647
210 S -0.599
211 P -0.245
212 Q -0.684
213 H -0.665
214 S -0.545
215 I -0.500
216 Q -0.753
217 E -0.666
218 A -0.640
219 E -0.480
220 E -0.516
221 A -0.439
222 A -0.523
223 V -0.545
224 Y -0.567
225 G -0.449
226 P -0.114
227 P -0.226
228 V -0.634
229 Y -0.681
230 R -0.813
231 S -0.387
232 G -0.480
233 Y -0.431
234 Q -0.323
235 I -0.429
236 L -0.554
237 Y -0.662
238 N -0.325
239 N -0.347
240 N -0.568
241 T -0.457
242 D -0.218
243 S -0.354
244 I -0.541
245 A -0.577
246 A -0.553
247 A -0.504
248 A -0.414
249 A -0.680
250 T -0.675
251 H -0.637
252 D -0.566
253 L -0.487
254 Y -0.599
255 P -0.367
256 Q -0.477
257 P -0.270
258 D -0.411
259 V -0.548
260 P 0.214
261 L -0.513
262 T -0.264
263 F -0.272
264 A -0.360
265 M -0.548
266 L -0.262
267 A -0.217
268 D -0.309
269 G -0.403
270 N -0.428
271 Y -0.317
272 V -0.553
273 P 0.189
274 L -0.478
275 P -0.103
276 S -0.273
277 S -0.625
278 T -0.352
279 N -0.104
280 T -0.331
281 Y -0.235
282 G -0.036
283 P -0.323
284 S -0.008
285 N -0.312
286 S -0.375
287 Y -0.167
288 G -0.109
289 Y -0.410
290 E -0.609
291 I -0.388
292 N -0.468
293 I 0.020
294 N -0.348
295 E -0.224
296 S 0.231
297 T -0.119
298 N -0.167
299 H -0.439
300 V -0.267
301 D 0.070
302 S -0.315
303 S -0.287
304 Y -0.428
305 L -0.523
306 P -0.167
307 H -0.508
308 P 0.104
309 I -0.360
310 Q -0.098
311 L -0.222
312 S -0.269
313 N -0.379
314 Y -0.482
315 F -0.222
316 T 0.186
317 L -0.402
318 P -0.010
319 S 0.149
320 S -0.114
321 C -1.000 *
322 A -1.000 *
323 Q -1.000 *
324 A -1.000 *
325 D -1.000 *
326 A 0.302
327 A -0.136
328 C 1.465
329 Q 0.317
330 C 2.443
331 G 1.049
332 D 0.844
333 N 1.055
334 C 2.903
335 E 0.593
336 C 1.995
337 L 0.329
338 G 0.991
339 C 3.179
340 L 0.566
341 T 0.741
342 H 1.942
343 P -1.000 *
344 N -1.000 *
345 N -1.000 *
346 A -1.000 *
347 T -1.000 *
348 T -1.000 *
349 L -1.000 *
350 A -1.000 *
351 A -1.000 *
352 L -1.000 *
353 N -1.000 *
354 H -1.000 *
355 I -1.000 *
356 S -1.000 *
357 A -1.000 *
358 L -1.000 *
359 E -1.000 *
360 K -1.000 *
361 E -1.000 *
362 T -1.000 *
363 I -1.000 *
364 S -1.000 *
365 H -1.000 *
366 T -1.000 *
367 D -1.000 *
368 L -1.000 *
369 H -1.000 *
370 H -1.000 *
371 T -1.000 *
372 F -1.000 *
373 K -1.000 *
374 H -1.000 *
375 E -1.000 *
376 V -1.000 *
377 N -1.000 *
378 S -1.000 *
379 S -1.000 *
380 N -1.000 *
381 N -1.000 *
382 Y -1.000 *
383 E -1.000 *
384 L -1.000 *
385 T -1.000 *
386 N -1.000 *
387 D -1.000 *
388 E -1.000 *
389 L -1.000 *
390 A -1.000 *
391 A -1.000 *
392 S -1.000 *
393 S -1.000 *
394 P -1.000 *
395 L -1.000 *
396 Y -1.000 *
397 T -1.000 *
398 S -1.000 *
399 S -1.000 *
400 S -1.000 *
401 V -1.000 *
402 P -1.000 *
403 P -1.000 *
404 S -1.000 *
405 H -1.000 *
406 I -1.000 *
407 T -1.000 *
408 T -1.000 *
409 G -1.000 *
410 S -1.000 *
411 T -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 73.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MVVINNVKMA CMKCIRGHRS STCKHNDREL FPIRPKGRPI SQCEKCRIAR ITRHLHVKCT
70 80 90 100 110 120
CNSRKKGSKC STSSTTDLDS SSASNSSCSI PSSISEKLLP RDNVKTHCPK RSASCCGKKP
130 140 150 160 170 180
DVMPLKINLE SQTDFMGMPL QSQRPHSESY RMLPEPEKFK SEYGYPSQFL PIEKLTSNVA
190 200 210 220 230 240
YPPNYNNYLK SPYQQPTNFP PEIQYNYSHS PQHSIQEAEE AAVYGPPVYR SGYQILYNNN
250 260 270 280 290 300
TDSIAAAAAT HDLYPQPDVP LTFAMLADGN YVPLPSSTNT YGPSNSYGYE ININESTNHV
310 320 330 340 350 360
DSSYLPHPIQ LSNYFTLPSS CAQADAACQC GDNCECLGCL THPNNATTLA ALNHISALEK
370 380 390 400 410
ETISHTDLHH TFKHEVNSSN NYELTNDELA ASSPLYTSSS VPPSHITTGS T
Cutf1 is a key copper-regulatory transcription factor in S. pombe to maintain normal physiological levels of copper in cells. When copper level is low, Cuf1 binds to the copper-signaling elements and induces the expression of genes encoding components of the copper transport pathway. Under conditions of copper excess, Cuf1 is exported from the nucleus and transcription is repressed.
[1]. "Crm1-mediated nuclear export of the Schizosaccharomyces pombe transcription factor Cuf1 during a shift from low to high copper concentrations."
Beaudoin J, Labbe S. (2007)
Eukaryot. Cell,
6:764-75
PubMed
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