Summary for Pap1 (NES ID: 8)
Full Name
AP-1-like transcription factor
UniProt
Alternative Names
Caffeine resistance protein 3
Organism
Schizosaccharomyces pombe (Fission yeast)
Experimental Evidence for CRM1-mediated Export
Mutations That Affect Nuclear Export
*highlighted yellow in the full sequence
I519A, L522A, L526A, C532S
Mutations That Affect CRM1 Binding
Unknown
Functional Export Signals
Secondary Structure of Export Signal
Unknown
Other Residues Important for Export
Unknown
Sequence
Show FASTA Format
>gi|19862217|sp|Q01663.2|AP1_SCHPO RecName: Full=AP-1-like transcription factor; AltName: Full=Caffeine resistance protein 3
MSGQTETLSSTSNIPIAKAEPEQSADFSASHKKRGPVSDRSSRRTSSEEVDLMPNVDDEVDGDVKPKKIG
RKNSDQEPSSKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELRILK
DGSFTFEMSLPHRNPSLSSLPTTGFSSNFAHMKDGISPQSNLHLSPNSIEKPNMHQNVLHNDRSADNLNH
RYQVPPTLVDSNSAQGTLSPETPSSSDSPSNLYLNYPKRKSITHLHHDCSALSNGENGEDVADGKQFCQK
LSTACGSIACSMLTKTTPHRASVDILSNLHESTVSPPMADESVQRSSEVSKSIPNVELSLNVNQQFVSPF
GGTDSFPLPTDTGLDSLFEPDSAIENSHLKNVVMEPELFQAWREPAESLDKEFFNDEGEIDDVFHNYFHN
SNENGDLITNSLHGLDFLENANESFPEQMYPFIKHNKDYISNHPDEVPPDGLPQKGKHDTSSQMPSENEI
VPAKERAYLSCPKVWSKIINHPRFESFDIDDLCSKLKNKAKCSSSGVLLDERDVEAALNQFN
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 988654444578999999999888787568778999999998889984236999998776
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: MSGQTETLSSTSNIPIAKAEPEQSADFSASHKKRGPVSDRSSRRTSSEEVDLMPNVDDEV
10 20 30 40 50 60
Conf: 789899889999999983799999999999999997899999999999999997776699
Pred: CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AA: DGDVKPKKIGRKNSDQEPSSKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTL
70 80 90 100 110 120
Conf: 999999999999999999732898744789999999999999899988888989999999
Pred: HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: ENDQLRQKVRQLEEELRILKDGSFTFEMSLPHRNPSLSSLPTTGFSSNFAHMKDGISPQS
130 140 150 160 170 180
Conf: 899999988899988876799999998888778999756888988999999999999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: NLHLSPNSIEKPNMHQNVLHNDRSADNLNHRYQVPPTLVDSNSAQGTLSPETPSSSDSPS
190 200 210 220 230 240
Conf: 878899998977765789887889999999888742234576777888789999999998
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: NLYLNYPKRKSITHLHHDCSALSNGENGEDVADGKQFCQKLSTACGSIACSMLTKTTPHR
250 260 270 280 290 300
Conf: 876655787678999999887755566777899987777667887569999988888999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: ASVDILSNLHESTVSPPMADESVQRSSEVSKSIPNVELSLNVNQQFVSPFGGTDSFPLPT
310 320 330 340 350 360
Conf: 999998889982322046898878810000235876445523458989877334786789
Pred: CCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: DTGLDSLFEPDSAIENSHLKNVVMEPELFQAWREPAESLDKEFFNDEGEIDDVFHNYFHN
370 380 390 400 410 420
Conf: 888998545578888876777679999998655888876789999999999999999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: SNENGDLITNSLHGLDFLENANESFPEQMYPFIKHNKDYISNHPDEVPPDGLPQKGKHDT
430 440 450 460 470 480
Conf: 879999987467689875594799997744999997898989999986136899972004
Pred: CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
AA: SSQMPSENEIVPAKERAYLSCPKVWSKIINHPRFESFDIDDLCSKLKNKAKCSSSGVLLD
490 500 510 520 530 540
Conf: 567999997339
Pred: HHHHHHHHHHCC
AA: ERDVEAALNQFN
550
Show Conservation Score by AL2CO
1 M -1.000 *
2 S -1.000 *
3 G -1.000 *
4 Q -1.000 *
5 T -1.000 *
6 E -1.000 *
7 T -1.000 *
8 L -1.000 *
9 S -1.000 *
10 S -1.000 *
11 T -1.000 *
12 S -1.000 *
13 N -1.000 *
14 I -1.000 *
15 P -1.000 *
16 I -1.000 *
17 A -1.000 *
18 K -1.000 *
19 A -1.000 *
20 E -1.000 *
21 P -1.000 *
22 E -1.000 *
23 Q -1.000 *
24 S -1.000 *
25 A -1.000 *
26 D -1.000 *
27 F -0.303
28 S -0.155
29 A -0.031
30 S -0.142
31 H -0.311
32 K -0.043
33 K -0.284
34 R -0.370
35 G -0.158
36 P 0.069
37 V -0.232
38 S -0.127
39 D -0.179
40 R -0.468
41 S -0.308
42 S -0.050
43 R -0.361
44 R -0.240
45 T -0.342
46 S -0.288
47 S -0.038
48 E -0.210
49 E -0.404
50 V -0.455
51 D -0.032
52 L -0.502
53 M -0.332
54 P -0.187
55 N -0.270
56 V -0.585
57 D -0.164
58 D 0.001
59 E -0.022
60 V -0.638
61 D 0.062
62 G -0.262
63 D -0.032
64 V 0.004
65 K -0.248
66 P 0.358
67 K 0.815
68 K 1.245
69 I 0.210
70 G 1.900
71 R 0.778
72 K 1.001
73 N 0.029
74 S 0.080
75 D 0.203
76 Q -0.183
77 E 0.391
78 P 0.485
79 S 0.164
80 S 0.284
81 K 1.562
82 R 3.265
83 K 1.748
84 A 1.018
85 Q 1.820
86 N 3.482
87 R 4.319
88 A 1.241
89 A 3.537
90 Q 4.507
91 R 2.644
92 A 1.920
93 F 1.951
94 R 4.490
95 K 1.340
96 R 5.158
97 K 2.776
98 E 1.406
99 D 0.691
100 H 1.355
101 L 1.936
102 K 1.029
103 A 1.100
104 L 2.927
105 E 3.014
106 T -0.103
107 Q 1.043
108 V 1.917
109 V 0.243
110 T -0.321
111 L 2.275
112 K 0.784
113 E 0.390
114 L -0.017
115 H -0.028
116 S -0.185
117 S -0.146
118 T -0.213
119 T -0.136
120 L -0.384
121 E 0.925
122 N 0.268
123 D -0.034
124 Q -0.221
125 L 1.126
126 R 1.385
127 Q -0.210
128 K -0.074
129 V 0.973
130 R -0.229
131 Q -0.103
132 L 1.364
133 E -0.003
134 E -0.458
135 E 1.622
136 L 1.609
137 R -0.463
138 I -0.273
139 L 0.834
140 K 1.102
141 D 0.086
142 G -0.463
143 S -0.534
144 F -0.650
145 T -0.561
146 F -0.524
147 E -0.398
148 M -0.452
149 S -0.577
150 L -0.528
151 P -0.407
152 H -0.727
153 R -0.555
154 N -0.478
155 P -0.446
156 S -0.624
157 L -0.792
158 S -0.597
159 S -0.720
160 L -0.593
161 P -0.249
162 T -0.374
163 T -0.690
164 G -0.470
165 F -0.598
166 S -0.503
167 S -0.466
168 N -0.362
169 F -0.600
170 A -0.403
171 H -0.617
172 M -0.731
173 K -0.599
174 D -0.401
175 G -0.437
176 I -0.694
177 S -0.328
178 P -0.453
179 Q -0.527
180 S -0.313
181 N -0.463
182 L -0.631
183 H -0.627
184 L -0.579
185 S -0.529
186 P -0.398
187 N -0.701
188 S -0.409
189 I -0.694
190 E -0.306
191 K -0.481
192 P -0.584
193 N -0.480
194 M -0.647
195 H -0.612
196 Q -0.382
197 N -0.529
198 V -0.509
199 L -0.642
200 H -0.695
201 N -0.407
202 D -0.539
203 R -0.735
204 S -0.713
205 A -0.565
206 D -0.456
207 N -0.648
208 L -0.559
209 N -0.488
210 H -0.660
211 R -0.645
212 Y -0.732
213 Q -0.475
214 V -0.593
215 P -0.651
216 P -0.409
217 T -0.617
218 L -0.662
219 V -0.597
220 D -0.561
221 S -0.657
222 N -0.552
223 S -0.617
224 A -0.670
225 Q -0.450
226 G -0.584
227 T -0.418
228 L -0.479
229 S -0.403
230 P -0.520
231 E -0.695
232 T -0.693
233 P -0.434
234 S -0.639
235 S -0.280
236 S -0.665
237 D -0.662
238 S -0.578
239 P -0.492
240 S -0.654
241 N -0.480
242 L -0.692
243 Y -0.417
244 L -0.794
245 N -0.541
246 Y -0.493
247 P -0.513
248 K -0.676
249 R -0.730
250 K -0.526
251 S -0.551
252 I -0.510
253 T -0.587
254 H -0.605
255 L -0.723
256 H -0.773
257 H -0.770
258 D -0.592
259 C -0.753
260 S -0.734
261 A -0.612
262 L -0.630
263 S -0.521
264 N -0.625
265 G -0.564
266 E -0.645
267 N -0.570
268 G -0.602
269 E -0.553
270 D -0.725
271 V -0.719
272 A -0.571
273 D -0.577
274 G -0.286
275 K -0.617
276 Q -0.621
277 F -0.622
278 C -0.633
279 Q -0.463
280 K -0.453
281 L -0.589
282 S -0.216
283 T -0.495
284 A -0.367
285 C -0.582
286 G -0.375
287 S -0.425
288 I -0.619
289 A -0.675
290 C -0.590
291 S 0.027
292 M -0.430
293 L -0.071
294 T -0.481
295 K -0.698
296 T -0.545
297 T -0.613
298 P -0.713
299 H -0.584
300 R -0.639
301 A -0.546
302 S -0.440
303 V -0.626
304 D -0.494
305 I -0.487
306 L -0.529
307 S -0.157
308 N -0.511
309 L -0.691
310 H -0.559
311 E -0.665
312 S -0.527
313 T -0.601
314 V -0.705
315 S -0.388
316 P -0.218
317 P -0.459
318 M -0.537
319 A -0.601
320 D -0.635
321 E -0.598
322 S -0.429
323 V -0.760
324 Q -0.682
325 R -0.445
326 S -0.542
327 S -0.700
328 E -0.494
329 V -0.628
330 S -0.535
331 K -0.858
332 S -0.302
333 I -0.796
334 P -0.361
335 N -0.490
336 V -0.466
337 E -0.688
338 L -0.726
339 S -0.599
340 L -0.724
341 N -0.607
342 V -0.747
343 N -0.630
344 Q -0.625
345 Q -0.636
346 F -0.727
347 V -0.768
348 S -0.280
349 P -0.547
350 F -0.634
351 G -0.663
352 G -0.496
353 T -0.608
354 D -0.463
355 S -0.732
356 F -0.556
357 P -0.592
358 L -0.507
359 P -0.489
360 T -0.382
361 D -0.219
362 T -0.585
363 G -0.285
364 L -0.587
365 D -0.061
366 S -0.524
367 L -0.749
368 F -0.518
369 E -0.625
370 P -0.304
371 D -0.176
372 S -0.230
373 A -0.475
374 I -0.692
375 E -0.718
376 N -0.391
377 S -0.466
378 H -0.492
379 L -0.256
380 K -0.313
381 N -0.147
382 V -0.218
383 V -0.413
384 M 0.150
385 E -0.095
386 P 0.239
387 E -0.362
388 L -0.045
389 F -0.025
390 Q -0.158
391 A -0.049
392 W -0.277
393 R -0.101
394 E 0.321
395 P -0.122
396 A -0.443
397 E -0.100
398 S 0.002
399 L -0.116
400 D -0.004
401 K -0.296
402 E -0.374
403 F -1.000 *
404 F -1.000 *
405 N -1.000 *
406 D -1.000 *
407 E -1.000 *
408 G -1.000 *
409 E -0.521
410 I -0.257
411 D 0.498
412 D 0.312
413 V -0.425
414 F 0.198
415 H -0.527
416 N -0.116
417 Y -1.000 *
418 F -1.000 *
419 H -1.000 *
420 N -1.000 *
421 S -1.000 *
422 N -1.000 *
423 E -1.000 *
424 N -1.000 *
425 G -1.000 *
426 D -1.000 *
427 L -1.000 *
428 I -1.000 *
429 T -1.000 *
430 N -1.000 *
431 S -1.000 *
432 L -1.000 *
433 H -1.000 *
434 G -1.000 *
435 L -0.518
436 D 0.439
437 F -0.292
438 L -0.405
439 E -0.410
440 N -0.266
441 A -0.701
442 N -0.146
443 E -0.398
444 S -0.184
445 F -0.358
446 P -0.246
447 E -0.344
448 Q -0.643
449 M -0.254
450 Y -0.359
451 P -0.323
452 F -0.548
453 I -0.544
454 K -0.467
455 H -0.540
456 N 0.231
457 K -0.673
458 D -0.101
459 Y -0.547
460 I -0.436
461 S -0.445
462 N -0.275
463 H -0.638
464 P -0.458
465 D -0.228
466 E -0.507
467 V -0.440
468 P -0.017
469 P -0.249
470 D -0.667
471 G -0.555
472 L -0.692
473 P -0.292
474 Q -0.326
475 K -0.340
476 G -0.295
477 K -0.427
478 H -0.609
479 D -0.296
480 T -0.440
481 S -0.355
482 S -0.650
483 Q -0.082
484 M -0.456
485 P -0.045
486 S -0.327
487 E -0.073
488 N -0.054
489 E -0.287
490 I 0.134
491 V 0.195
492 P 0.435
493 A 0.307
494 K 0.101
495 E 0.210
496 R 0.164
497 A 0.175
498 Y -0.190
499 L 1.278
500 S 0.455
501 C 2.657
502 P 0.875
503 K 0.813
504 V 1.548
505 W 3.273
506 S 0.398
507 K 1.590
508 I 2.097
509 I 0.483
510 N 0.358
511 H 0.543
512 P 1.570
513 R 0.449
514 F 1.305
515 E 0.498
516 S 1.247
517 F 1.056
518 D 2.702
519 I 1.914
520 D 2.092
521 D 0.704
522 L 5.158
523 C 3.952
524 S -0.020
525 K 1.381
526 L 2.370
527 K 1.019
528 N 0.262
529 K 2.706
530 A 3.532
531 K 2.227
532 C 3.762
533 S 1.885
534 S 1.765
535 S -0.012
536 G 2.203
537 V 1.524
538 L 2.447
539 L 2.905
540 D 0.120
541 E 0.023
542 R 0.107
543 D 1.959
544 V 1.788
545 E 0.165
546 A -0.219
547 A 1.695
548 L 1.965
549 N 0.120
550 Q 1.605
551 F -1.000 *
552 N -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 8.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MSGQTETLSS TSNIPIAKAE PEQSADFSAS HKKRGPVSDR SSRRTSSEEV DLMPNVDDEV
70 80 90 100 110 120
DGDVKPKKIG RKNSDQEPSS KRKAQNRAAQ RAFRKRKEDH LKALETQVVT LKELHSSTTL
130 140 150 160 170 180
ENDQLRQKVR QLEEELRILK DGSFTFEMSL PHRNPSLSSL PTTGFSSNFA HMKDGISPQS
190 200 210 220 230 240
NLHLSPNSIE KPNMHQNVLH NDRSADNLNH RYQVPPTLVD SNSAQGTLSP ETPSSSDSPS
250 260 270 280 290 300
NLYLNYPKRK SITHLHHDCS ALSNGENGED VADGKQFCQK LSTACGSIAC SMLTKTTPHR
310 320 330 340 350 360
ASVDILSNLH ESTVSPPMAD ESVQRSSEVS KSIPNVELSL NVNQQFVSPF GGTDSFPLPT
370 380 390 400 410 420
DTGLDSLFEP DSAIENSHLK NVVMEPELFQ AWREPAESLD KEFFNDEGEI DDVFHNYFHN
430 440 450 460 470 480
SNENGDLITN SLHGLDFLEN ANESFPEQMY PFIKHNKDYI SNHPDEVPPD GLPQKGKHDT
490 500 510 520 530 540
SSQMPSENEI VPAKERAYLS CPKVWSKIIN HPRFESFDID DLCSKLKNKA KCSSSGVLLD
550
ERDVEAALNQ FN
3D Structures in PDB
1GD2 (X-Ray,2.00 Å resolution)
1DG2 (X-Ray,2.00 Å resolution)
Comments
Pap1 is a fission yeast AP-1-like transcription factor, which is involved in oxidative stress response. Its bZip and cysteine-rich domains (CRD) are homologous to Yap1/Yap2. Kudo et al. found that residues 515-533 within CRD are sufficient to export GST-GFP to the cytoplasm. LMB mislocalizes the fusion protein. Single mutations I519A, L522A, L526A, and C532S greatly reduce export activity while F517A has a lesser impact. They also noted that the CRD can export GFP-GST fusion protein in mammmalian cells. In both S. pombe and mammalian cell, DEM ihibits nuclear export of Pap1 in the oxidative stress response possibly due through oxidation C532, and C523.
References
[1]. "A novel nuclear export signal sensitive to oxidative stress in the fission yeast transcription factor Pap1"
Kudo N, Taoka, H., Toda, T., Yoshida, M., Horinouchi, S. (1999)
J Biol Chem,
274:15151-15158
PubMed
User Input
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