Summary for γ134.5 Protein (HSV-1) (NES ID: 81)
Full Name
Neurovirulence factor ICP34.5
UniProt Alternative Names
Infected cell protein 34.5
protein gamma(1)34.5
Organism
Human herpesvirus 1 (strain F) (HHV-1) (Human herpes simplex virus 1)
Experimental Evidence for CRM1-mediated Export
Mutations That Affect Nuclear Export
Mutations That Affect CRM1 Binding
Unknown
Functional Export Signals
Undetermined
Secondary Structure of Export Signal
Unknown
Other Residues Important for Export
Unknown
Sequence
Show FASTA Format
>gi|585297|sp|P08353.2|ICP34_HHV1F RecName: Full=Neurovirulence factor ICP34.5; AltName: Full=Infected cell protein 34.5; AltName: Full=protein gamma(1)34.5
MARRRRHRGPRRPRPPGPTGAVPTAQSQVTSTPNSEPAVRSAPAAAPPPPPASGPPPSCSLLLRQWLHVP
ESASDDDDDDDWPDSPPPEPAPEARPTAAAPRPRSPPPGAGPGGGANPSHPPSRPFRLPPRLALRLRVTA
EHLARLRLRRAGGEGAPEPPATPATPATPATPATPATPATPATPATPATPARVRFSPHVRVRHLVVWASA
ARLARRGSWARERADRARFRRRVAEAEAVIGPCLGPEARARALARGAGPANSV
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 911123579999999999999878777543379996000149999999999999999903
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCH
AA: MARRRRHRGPRRPRPPGPTGAVPTAQSQVTSTPNSEPAVRSAPAAAPPPPPASGPPPSCS
10 20 30 40 50 60
Conf: 442102347899999989999999999999999999878999999999999999999999
Pred: HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: LLLRQWLHVPESASDDDDDDDWPDSPPPEPAPEARPTAAAPRPRSPPPGAGPGGGANPSH
70 80 90 100 110 120
Conf: 999999998465532212345676777541699999999999999999988899999999
Pred: CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: PPSRPFRLPPRLALRLRVTAEHLARLRLRRAGGEGAPEPPATPATPATPATPATPATPAT
130 140 150 160 170 180
Conf: 999999999980450897379999730137887416803777665579999999998875
Pred: CCCCCCCCCCCEEECCCCCEEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AA: PATPATPATPARVRFSPHVRVRHLVVWASAARLARRGSWARERADRARFRRRVAEAEAVI
190 200 210 220 230 240
Conf: 48889899999998514999999
Pred: CCCCCHHHHHHHHHHCCCCCCCC
AA: GPCLGPEARARALARGAGPANSV
250 260
Show Conservation Score by AL2CO
1 M -1.000 *
2 A -1.000 *
3 R -1.000 *
4 R -1.000 *
5 R -1.000 *
6 R -1.000 *
7 H -1.000 *
8 R -1.000 *
9 G -1.000 *
10 P -1.000 *
11 R 0.698
12 R -0.048
13 P 3.025
14 R -0.289
15 P -0.273
16 P 2.267
17 G -0.167
18 P 1.889
19 T 1.649
20 G -0.616
21 A 0.456
22 V 1.175
23 P 1.102
24 T 0.258
25 A 1.379
26 Q -0.265
27 S 0.642
28 Q 0.875
29 V -0.766
30 T 0.550
31 S 0.710
32 T -0.274
33 P -0.142
34 N 0.287
35 S 0.077
36 E 0.467
37 P 1.791
38 A 0.678
39 V -1.110
40 R 2.015
41 S 0.689
42 A 0.664
43 P 1.122
44 A -0.278
45 A -0.742
46 A -0.133
47 P 0.411
48 P 0.394
49 P 0.788
50 P 0.024
51 P 0.127
52 A 1.097
53 S -0.434
54 G -1.009
55 P 0.423
56 P -0.466
57 P -0.355
58 S 0.122
59 C -0.482
60 S -0.429
61 L 0.843
62 L -0.864
63 L -0.106
64 R 0.849
65 Q -0.510
66 W -1.295
67 L 1.852
68 H -0.982
69 V -1.068
70 P 3.150
71 E 0.819
72 S 0.081
73 A 0.421
74 S 0.173
75 D -0.019
76 D 0.730
77 D 0.468
78 D -0.524
79 D 0.314
80 D -0.299
81 D -1.235
82 W -1.117
83 P 0.778
84 D 0.628
85 S -0.260
86 P 0.591
87 P -0.200
88 P -0.490
89 E -0.031
90 P -0.313
91 A -0.521
92 P 0.666
93 E -0.583
94 A -0.938
95 R -0.519
96 P -1.260
97 T 0.123
98 A -0.076
99 A -0.719
100 A -1.349
101 P 0.284
102 R -0.098
103 P 0.785
104 R -1.348
105 S -0.863
106 P -0.521
107 P -1.210
108 P 0.119
109 G -0.268
110 A -0.516
111 G -1.543
112 P 0.642
113 G -0.287
114 G -0.614
115 G 0.369
116 A -0.318
117 N -1.403
118 P 0.202
119 S -0.834
120 H -0.883
121 P -0.866
122 P -0.636
123 S -0.940
124 R -1.170
125 P -0.063
126 F -1.621
127 R 0.983
128 L -0.937
129 P -0.171
130 P 0.663
131 R -1.045
132 L -0.937
133 A -0.054
134 L -0.547
135 R -1.670
136 L -0.864
137 R -1.205
138 V -0.719
139 T -0.338
140 A -0.580
141 E -0.836
142 H -0.497
143 L -0.908
144 A -1.469
145 R 0.014
146 L -0.445
147 R -0.220
148 L -0.442
149 R -0.543
150 R -0.504
151 A 0.266
152 G 0.013
153 G -0.990
154 E -0.114
155 G -0.303
156 A -0.266
157 P 0.963
158 E -0.218
159 P -0.993
160 P 0.674
161 A -0.553
162 T -0.765
163 P 0.038
164 A -1.495
165 T -0.403
166 P -0.399
167 A -0.923
168 T -1.311
169 P 0.714
170 A -0.582
171 T -0.899
172 P 0.637
173 A -0.672
174 T -1.381
175 P 0.297
176 A -0.259
177 T -0.626
178 P 0.651
179 A 0.048
180 T -1.513
181 P -0.450
182 A -0.030
183 T -0.273
184 P 1.550
185 A 0.676
186 T -0.338
187 P 2.109
188 A -1.211
189 T 0.063
190 P 0.011
191 A 0.029
192 R 0.137
193 V 1.837
194 R -0.297
195 F 1.508
196 S 3.157
197 P 3.813
198 H 1.836
199 V 2.193
200 R 0.536
201 V 3.602
202 R -1.000 *
203 H -1.000 *
204 L -1.000 *
205 V -1.000 *
206 V -1.000 *
207 W -1.000 *
208 A -1.000 *
209 S -1.000 *
210 A -1.000 *
211 A -1.000 *
212 R -1.000 *
213 L -1.000 *
214 A -1.000 *
215 R -1.000 *
216 R -1.000 *
217 G -1.000 *
218 S -1.000 *
219 W -1.000 *
220 A -1.000 *
221 R -1.000 *
222 E -1.000 *
223 R -1.000 *
224 A -1.000 *
225 D -1.000 *
226 R -1.000 *
227 A -1.000 *
228 R -1.000 *
229 F -1.000 *
230 R -1.000 *
231 R -1.000 *
232 R -1.000 *
233 V -1.000 *
234 A -1.000 *
235 E -1.000 *
236 A -1.000 *
237 E -1.000 *
238 A -1.000 *
239 V -1.000 *
240 I -1.000 *
241 G -1.000 *
242 P -1.000 *
243 C -1.000 *
244 L -1.000 *
245 G -1.000 *
246 P -1.000 *
247 E -1.000 *
248 A -1.000 *
249 R -1.000 *
250 A -1.000 *
251 R -1.000 *
252 A -1.000 *
253 L -1.000 *
254 A -1.000 *
255 R -1.000 *
256 G -1.000 *
257 A -1.000 *
258 G -1.000 *
259 P -1.000 *
260 A -1.000 *
261 N -1.000 *
262 S -1.000 *
263 V -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 81.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MARRRRHRGP RRPRPPGPTG AVPTAQSQVT STPNSEPAVR SAPAAAPPPP PASGPPPSCS
70 80 90 100 110 120
LLLRQWLHVP ESASDDDDDD DWPDSPPPEP APEARPTAAA PRPRSPPPGA GPGGGANPSH
130 140 150 160 170 180
PPSRPFRLPP RLALRLRVTA EHLARLRLRR AGGEGAPEPP ATPATPATPA TPATPATPAT
190 200 210 220 230 240
PATPATPATP ARVRFSPHVR VRHLVVWASA ARLARRGSWA RERADRARFR RRVAEAEAVI
250 260
GPCLGPEARA RALARGAGPA NSV
3D Structures in PDB
Not Available
Comments
γ134.5 Protein of herpes simplex virus type 1 (HSV-1) is essential for HSV to display neurovirulence in vivo. γ134.5 Protein is distributed in the nucleus, nucleolus, and the cytoplasm. AA 1-16 is required for nucleolar localization. AA 208-236 contains a bipartite nuclear localization signal, whereas aa 116-146 is required for nuclear export, which is sensitive to LMB. Although Cheng et al. pointed out the sequence aa 128-137 resembles a NES, they didn't show that it can function autonomously. However, they demonstrated that L134A/L136A mutation causes exclusive nuclear/nucleolar localization of the mutant γ134.5 Protein.
References
[1]. "Signals that dictate nuclear, nucleolar, and cytoplasmic shuttling of the gamma(1)34.5 protein of herpes simplex virus type 1"
Cheng G, Brett ME, He B. (2002)
J. Virol.,
76:9434-9445
PubMedUser Input
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.