Summary for Cyclin B1 (NES ID: 9)
Full Name
G2/mitotic-specific cyclin-B1
UniProt
Alternative Names
None
Organism
Xenopus laevis (African clawed frog)
Experimental Evidence for CRM1-mediated Export
Mutations That Affect Nuclear Export
Mutations That Affect CRM1 Binding
Functional Export Signals
Secondary Structure of Export Signal
Unknown
Other Residues Important for Export
Unknown
Sequence
Show FASTA Format
>gi|116158|sp|P13350.1|CCNB1_XENLA RecName: Full=G2/mitotic-specific cyclin-B1
MSLRVTRNMLANAENNVKTTLAGKRVVATKPGLRPRTALGDIGNKAEVKVPTKKELKPAVKAAKKAKPVD
KLLEPLKVIEENVCPKPAQVEPSSPSPMETSGCLPDELCQAFSDVLIHVKDVDADDDGNPMLCSEYVKDI
YAYLRSLEDAQAVRQNYLHGQEVTGNMRAILIDWLVQVQMKFRLLQETMFMTVGIIDRFLQEHPVPKNQL
QLVGVTAMFLAAKYEEMYPPEIGDFTFVTDHTYTKAQIRDMEMKILRVLKFAIGRPLPLHFLRRASKIGE
VTAEQHSLAKYLMELVMVDYDMVHFTPSQIAAASSCLSLKILNAGDWTPTLHHYMAYSEEDLVPVMQHMA
KNIIKVNKGLTKHLTVKNKYASSKQMKISTIPQLRSDVVVEMARPLM
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 952000112211000111112688545689988877753345765666678765664001
Pred: CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
AA: MSLRVTRNMLANAENNVKTTLAGKRVVATKPGLRPRTALGDIGNKAEVKVPTKKELKPAV
10 20 30 40 50 60
Conf: 001357887665674211124678999877999999987889990457644320047876
Pred: HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
AA: KAAKKAKPVDKLLEPLKVIEENVCPKPAQVEPSSPSPMETSGCLPDELCQAFSDVLIHVK
70 80 90 100 110 120
Conf: 686789999851332399999999986873289988536798885414888999998743
Pred: CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AA: DVDADDDGNPMLCSEYVKDIYAYLRSLEDAQAVRQNYLHGQEVTGNMRAILIDWLVQVQM
130 140 150 160 170 180
Conf: 036761357778765542113795468760255699999875203348998786478529
Pred: HCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
AA: KFRLLQETMFMTVGIIDRFLQEHPVPKNQLQLVGVTAMFLAAKYEEMYPPEIGDFTFVTD
190 200 210 220 230 240
Conf: 988999999999999998176568886245767532234577457879999998642101
Pred: CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
AA: HTYTKAQIRDMEMKILRVLKFAIGRPLPLHFLRRASKIGEVTAEQHSLAKYLMELVMVDY
250 260 270 280 290 300
Conf: 467879249999999999982258998511110269990128999999999987322898
Pred: CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
AA: DMVHFTPSQIAAASSCLSLKILNAGDWTPTLHHYMAYSEEDLVPVMQHMAKNIIKVNKGL
310 320 330 340 350 360
Conf: 5168988632054222001455578488998410889
Pred: CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC
AA: TKHLTVKNKYASSKQMKISTIPQLRSDVVVEMARPLM
370 380 390
Show Conservation Score by AL2CO
1 M -1.000 *
2 S -1.000 *
3 L -1.000 *
4 R -1.000 *
5 V -1.000 *
6 T -1.000 *
7 R -0.308
8 N -0.470
9 M -0.514
10 L -0.742
11 A -0.659
12 N -0.563
13 A -0.847
14 E -0.613
15 N -0.651
16 N -0.821
17 V -0.835
18 K -0.784
19 T -0.793
20 T -0.788
21 L -0.876
22 A -0.772
23 G -0.792
24 K -0.569
25 R -0.787
26 V -0.825
27 V -0.848
28 A -0.703
29 T -0.826
30 K -0.656
31 P -0.811
32 G -0.812
33 L -0.821
34 R -0.556
35 P -0.488
36 R -0.241
37 T -0.656
38 A -0.353
39 L -0.546
40 G -0.524
41 D -0.455
42 I -0.512
43 G -0.544
44 N -0.198
45 K -0.697
46 A -0.839
47 E -0.762
48 V -0.753
49 K -0.792
50 V -0.875
51 P -0.801
52 T -0.868
53 K -0.747
54 K -0.757
55 E -0.882
56 L -0.931
57 K -0.857
58 P -0.665
59 A -0.756
60 V -0.921
61 K -0.735
62 A -0.788
63 A -0.871
64 K -0.837
65 K -0.787
66 A -0.802
67 K -0.812
68 P -0.896
69 V -0.853
70 D -0.877
71 K -0.912
72 L -0.947
73 L -0.822
74 E -0.778
75 P -0.806
76 L -0.868
77 K -0.886
78 V -0.925
79 I -0.976
80 E -0.936
81 E -0.745
82 N -0.796
83 V -0.795
84 C -0.897
85 P -0.847
86 K -0.788
87 P -0.781
88 A -0.870
89 Q -0.867
90 V -0.864
91 E -0.716
92 P -0.876
93 S -0.877
94 S -0.886
95 P -0.826
96 S -0.905
97 P -0.891
98 M -0.884
99 E -0.717
100 T -0.853
101 S -0.816
102 G -0.946
103 C -0.909
104 L -0.781
105 P -0.855
106 D -0.895
107 E -0.784
108 L -0.924
109 C -0.937
110 Q -0.816
111 A -0.878
112 F -0.948
113 S -0.870
114 D -0.845
115 V -0.873
116 L -0.912
117 I -0.907
118 H -0.955
119 V -0.564
120 K -0.783
121 D -0.158
122 V -0.128
123 D -0.300
124 A -0.762
125 D -0.780
126 D -0.819
127 D -1.018
128 G -0.824
129 N 0.194
130 P -0.360
131 M -0.278
132 L -0.591
133 C -0.011
134 S -0.077
135 E -0.202
136 Y 1.181
137 V 0.647
138 K -0.796
139 D 1.263
140 I 1.386
141 Y 0.997
142 A -0.780
143 Y 0.756
144 L 0.659
145 R -0.203
146 S -0.740
147 L -0.467
148 E 1.294
149 D -0.936
150 A -0.708
151 Q -0.677
152 A -0.775
153 V 0.544
154 R -0.817
155 Q -0.660
156 N -0.516
157 Y 0.478
158 L -0.198
159 H -0.756
160 G -0.510
161 Q -0.612
162 E -0.607
163 V 0.923
164 T -0.173
165 G -0.814
166 N -0.259
167 M 1.182
168 R 2.675
169 A -0.074
170 I 1.353
171 L 2.675
172 I 0.885
173 D 2.047
174 W 2.672
175 L 1.361
176 V 0.510
177 Q 0.901
178 V 1.873
179 Q 0.363
180 M -0.670
181 K 0.450
182 F 1.707
183 R -0.238
184 L 2.012
185 L -0.553
186 Q -0.310
187 E 1.615
188 T 2.457
189 M 1.062
190 F 1.209
191 M 1.250
192 T 0.857
193 V 0.650
194 G 0.049
195 I 0.276
196 I 0.894
197 D 3.053
198 R 0.519
199 F 1.524
200 L 1.742
201 Q -0.057
202 E -0.856
203 H -0.406
204 P -0.887
205 V 0.435
206 P -0.685
207 K 0.908
208 N -0.543
209 Q -0.285
210 L 1.495
211 Q 2.666
212 L 3.053
213 V 1.332
214 G 2.456
215 V 0.500
216 T 0.957
217 A 1.396
218 M 0.888
219 F 1.241
220 L 1.111
221 A 1.967
222 A 1.342
223 K 2.658
224 Y 1.903
225 E 3.053
226 E 2.327
227 M 0.488
228 Y -0.324
229 P 0.342
230 P 2.022
231 E -0.753
232 I 1.072
233 G -0.330
234 D 0.687
235 F 1.186
236 T -0.148
237 F -0.087
238 V 0.863
239 T 0.965
240 D 1.824
241 H 0.045
242 T 0.777
243 Y 1.797
244 T -0.467
245 K -0.491
246 A -0.802
247 Q 0.715
248 I 1.284
249 R 0.541
250 D -0.592
251 M 1.168
252 E 3.053
253 M -0.639
254 K -0.821
255 I 0.851
256 L 1.021
257 R -0.346
258 V -0.817
259 L 0.857
260 K -0.418
261 F 1.076
262 A -0.378
263 I 0.802
264 G 0.111
265 R -0.533
266 P 2.318
267 L 0.572
268 P 0.124
269 L -0.156
270 H -0.427
271 F 3.053
272 L 0.941
273 R -0.209
274 R 1.440
275 A -0.030
276 S 0.219
277 K 0.143
278 I -0.336
279 G -0.467
280 E -0.822
281 V -0.464
282 T -0.159
283 A -0.932
284 E -0.536
285 Q -0.493
286 H 0.115
287 S -0.393
288 L 0.606
289 A 0.755
290 K -0.269
291 Y 2.126
292 L 0.789
293 M 0.063
294 E 2.571
295 L 0.750
296 V 0.599
297 M 0.709
298 V -0.047
299 D 0.598
300 Y -0.386
301 D -0.386
302 M 0.221
303 V 0.449
304 H -0.780
305 F -0.174
306 T -0.701
307 P 0.953
308 S 3.053
309 Q -0.512
310 I 0.331
311 A 1.316
312 A 1.442
313 A 1.277
314 S 0.926
315 S -0.052
316 C -0.011
317 L 0.251
318 S 1.355
319 L -0.199
320 K -0.859
321 I 0.213
322 L -0.045
323 N -0.164
324 A -0.816
325 G -0.775
326 D -0.674
327 W 3.053
328 T 0.142
329 P -0.704
330 T -0.468
331 L 0.236
332 H -0.425
333 H -0.449
334 Y 0.406
335 M 1.006
336 A -0.439
337 Y 1.849
338 S -0.506
339 E -0.621
340 E -0.553
341 D -0.002
342 L 1.373
343 V -0.822
344 P -0.477
345 V 0.017
346 M -0.133
347 Q -0.747
348 H -0.404
349 M 0.889
350 A -0.421
351 K -0.721
352 N -0.495
353 I -0.343
354 I -0.722
355 K -0.737
356 V -0.728
357 N -0.628
358 K -0.722
359 G -0.477
360 L -0.926
361 T -0.707
362 K -0.732
363 H 0.282
364 L -0.692
365 T 0.504
366 V 0.620
367 K 0.435
368 N -0.330
369 K 3.053
370 Y 2.063
371 A -0.265
372 S -0.433
373 S -0.685
374 K 0.380
375 Q 0.004
376 M -0.681
377 K -0.497
378 I 0.806
379 S 1.689
380 T -0.587
381 I -0.444
382 P -0.124
383 Q -0.403
384 L -0.212
385 R -0.336
386 S -0.241
387 D -0.542
388 V -0.319
389 V -1.000 *
390 V -1.000 *
391 E -1.000 *
392 M -1.000 *
393 A -1.000 *
394 R -1.000 *
395 P -1.000 *
396 L -1.000 *
397 M -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 9.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MSLRVTRNML ANAENNVKTT LAGKRVVATK PGLRPRTALG DIGNKAEVKV PTKKELKPAV
70 80 90 100 110 120
KAAKKAKPVD KLLEPLKVIE ENVCPKPAQV EPSSPSPMET SGCLPDELCQ AFSDVLIHVK
130 140 150 160 170 180
DVDADDDGNP MLCSEYVKDI YAYLRSLEDA QAVRQNYLHG QEVTGNMRAI LIDWLVQVQM
190 200 210 220 230 240
KFRLLQETMF MTVGIIDRFL QEHPVPKNQL QLVGVTAMFL AAKYEEMYPP EIGDFTFVTD
250 260 270 280 290 300
HTYTKAQIRD MEMKILRVLK FAIGRPLPLH FLRRASKIGE VTAEQHSLAK YLMELVMVDY
310 320 330 340 350 360
DMVHFTPSQI AAASSCLSLK ILNAGDWTPT LHHYMAYSEE DLVPVMQHMA KNIIKVNKGL
370 380 390
TKHLTVKNKY ASSKQMKIST IPQLRSDVVV EMARPLM
3D Structures in PDB
Not Available
Comments
Cyclin B1/Cdc2 complex is critical for regulating cell mitosis. Cyclin B1 translocates from the cytoplasm to the nucleus at the onset of mitosis. It was previously found that there is a domain of Cyclin B1 (called CRS) in human that was sufficient for its cytoplasmic localization. In Xenopus, the CRS of Cyclin B1 is 61% identical to human. Yang et al. demonstrated through nuclear injection and cell contents analysis that Cyclin B1 is predominantly cytoplasmic. Cyclin B1 is actively transported out of the nucleus, and the process requires RanGTP. They further showed that aa 76-125, when fused with GST, can export the fusion protein out of the nucleus. The export is sensitive to LMB. Mutation of F112 to alanine abort both in vivo export and in vitro CRM1 binding. In addition, CRS contains four serine phosphorylation site, which are important for Cyclin B1 nuclear accumulation. Yang et al. showed that mutation of serines to Glu, which mimics constitutive phosphorylation, reduces the affinity of Cyclin B1 for CRM1.
References
[1]. "Control of cyclin B1 localization through regulated binding of the nuclear export factor CRM1"
Yang, J., Bardes, E.S., Moore, J.D., Brennan, J., Powers, M.A., Kornbluth, S. (1998)
Genes Dev,
12:2131-2143
PubMed
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