Show FASTA Format
>gi|136920|sp|P10231.1|TG47_HHV11 RecName: Full=Tegument protein UL47; AltName: Full=82/81 kDa tegument protein; AltName: Full=VMW82/81; AltName: Full=VP13/14
MSAREPAGRRRRASTRPRASPVADEPAGDGVGFMGYLRAVFRGDDDSELEALEEMAGDEPPVRRRREGPR
ARRRRASEAPPTSHRRASRQRPGPDAARSQSVRGRLDDDDEVPRGPPQARQGGYLGPVDARAILGRVGGS
RVAPSPLFLEELQYEEDDYPEAVGPEDGGGARSPPKVEVLEGRVPGPELRAAFPLDRLAPQVAVWDESVR
SALALGHPAGFYPCPDSAFGLSRVGVMHFASPDNPAVFFRQTLQQGEALAWYITGDGILDLTDRRTKTSP
AQAMSFLADAVVRLAINGWVCGTRLHAEARGSDLDDRAAELRRQFASLTALRPVGAAAVPLLSAGGLVSP
QSGPDAAVFRSSLGSLLYWPGVRALLDRDCRVAARYAGRMTYLATGALLARFNPDAVRCVLTREAAFLGR
VLDVLAVMAEQTVQWLSVVVGARLHPHVHHPAFADVAREELFRALPLGSPAVVGAEHEALGDTAARRLLA
NSGLNAVLGAAVYALHTALATVTLKYARACGDAHRRRDDAAATRAILAAGLVLQRLLGFADTVVACVTLA
AFDGGFTAPEVGTYTPLRYACVLRATQPLYARTTPAKFWADVRAAAEHVDLRPASSAPRAPVSGTADPAF
LLKDLEPFPPAPVSGGSVLGPRVRVVDIMSQFRKLLMGDEGAAALRAHVSGRRATGLGGPPRP
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 988884210011357999999999999987640124556653899737789888618999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCC
AA: MSAREPAGRRRRASTRPRASPVADEPAGDGVGFMGYLRAVFRGDDDSELEALEEMAGDEP
10 20 30 40 50 60
Conf: 732245798511247778999930001479999600012334699899999999998889
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: PVRRRREGPRARRRRASEAPPTSHRRASRQRPGPDAARSQSVRGRLDDDDEVPRGPPQAR
70 80 90 100 110 120
Conf: 899999774356764415886699966744310275878877788899999999840013
Pred: CCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: QGGYLGPVDARAILGRVGGSRVAPSPLFLEELQYEEDDYPEAVGPEDGGGARSPPKVEVL
130 140 150 160 170 180
Conf: 699992134210880000767830158799887408999978999987666667720002
Pred: CCCCCCHHHHHCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC
AA: EGRVPGPELRAAFPLDRLAPQVAVWDESVRSALALGHPAGFYPCPDSAFGLSRVGVMHFA
190 200 210 220 230 240
Conf: 899825899999988999999984022022100135689145877889999999853343
Pred: CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AA: SPDNPAVFFRQTLQQGEALAWYITGDGILDLTDRRTKTSPAQAMSFLADAVVRLAINGWV
250 260 270 280 290 300
Conf: 210133521189852358999974210125665653210223118988999983489987
Pred: HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHH
AA: CGTRLHAEARGSDLDDRAAELRRQFASLTALRPVGAAAVPLLSAGGLVSPQSGPDAAVFR
310 320 330 340 350 360
Conf: 410234431665643136513588768877778777754310799861200899999987
Pred: HHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AA: SSLGSLLYWPGVRALLDRDCRVAARYAGRMTYLATGALLARFNPDAVRCVLTREAAFLGR
370 380 390 400 410 420
Conf: 899999999999999999863213889998578988875100028888800001035430
Pred: HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC
AA: VLDVLAVMAEQTVQWLSVVVGARLHPHVHHPAFADVAREELFRALPLGSPAVVGAEHEAL
430 440 450 460 470 480
Conf: 664677763111368999999999999999999999998299753432499999999999
Pred: CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AA: GDTAARRLLANSGLNAVLGAAVYALHTALATVTLKYARACGDAHRRRDDAAATRAILAAG
490 500 510 520 530 540
Conf: 999997444779999999887608999854457665789999984065554349688999
Pred: HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
AA: LVLQRLLGFADTVVACVTLAAFDGGFTAPEVGTYTPLRYACVLRATQPLYARTTPAKFWA
550 560 570 580 590 600
Conf: 999997633742278999999865446766558989899999999876677551689898
Pred: HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AA: DVRAAAEHVDLRPASSAPRAPVSGTADPAFLLKDLEPFPPAPVSGGSVLGPRVRVVDIMS
610 620 630 640 650 660
Conf: 978866044013432100044446799999999
Pred: HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC
AA: QFRKLLMGDEGAAALRAHVSGRRATGLGGPPRP
670 680 690
Show Conservation Score by AL2CO
1 M -1.000 *
2 S -1.000 *
3 A -1.000 *
4 R -1.000 *
5 E -1.000 *
6 P -1.000 *
7 A -1.000 *
8 G -1.000 *
9 R -1.000 *
10 R -1.000 *
11 R -1.000 *
12 R -1.000 *
13 A -1.000 *
14 S -1.000 *
15 T -1.000 *
16 R -1.000 *
17 P -1.000 *
18 R -1.000 *
19 A -1.000 *
20 S -1.000 *
21 P -1.000 *
22 V -1.000 *
23 A -1.000 *
24 D -1.000 *
25 E -1.000 *
26 P -1.000 *
27 A -1.000 *
28 G -1.000 *
29 D -1.000 *
30 G -1.000 *
31 V -1.000 *
32 G -1.000 *
33 F -1.000 *
34 M -1.000 *
35 G -1.000 *
36 Y -1.000 *
37 L -1.000 *
38 R -1.000 *
39 A -1.000 *
40 V -1.000 *
41 F -1.000 *
42 R -1.000 *
43 G -1.000 *
44 D -1.000 *
45 D -1.000 *
46 D -1.000 *
47 S -1.000 *
48 E -1.000 *
49 L -1.000 *
50 E -1.000 *
51 A -1.000 *
52 L -1.000 *
53 E -1.000 *
54 E -1.000 *
55 M -1.000 *
56 A -1.000 *
57 G -1.000 *
58 D -1.000 *
59 E -1.000 *
60 P -1.000 *
61 P -1.000 *
62 V -1.000 *
63 R -1.000 *
64 R -1.000 *
65 R -1.000 *
66 R -1.000 *
67 E -1.000 *
68 G -1.000 *
69 P -1.000 *
70 R -1.000 *
71 A -1.000 *
72 R -1.000 *
73 R -1.000 *
74 R -1.000 *
75 R -1.000 *
76 A -1.000 *
77 S -1.000 *
78 E -1.000 *
79 A -1.000 *
80 P -1.000 *
81 P -1.000 *
82 T -1.000 *
83 S -1.000 *
84 H -1.000 *
85 R -1.000 *
86 R -1.000 *
87 A -1.000 *
88 S -1.000 *
89 R -1.000 *
90 Q -1.000 *
91 R -1.000 *
92 P -1.000 *
93 G -1.000 *
94 P -1.000 *
95 D -1.000 *
96 A -1.000 *
97 A -1.000 *
98 R -1.000 *
99 S -1.000 *
100 Q -1.000 *
101 S -1.000 *
102 V -1.000 *
103 R -1.000 *
104 G -1.000 *
105 R -1.000 *
106 L -1.000 *
107 D -1.000 *
108 D -1.000 *
109 D -1.000 *
110 D -1.000 *
111 E -1.000 *
112 V -1.000 *
113 P -1.000 *
114 R -1.000 *
115 G -1.000 *
116 P -1.000 *
117 P -1.000 *
118 Q -1.000 *
119 A -1.000 *
120 R -1.000 *
121 Q -1.000 *
122 G -1.000 *
123 G 1.152
124 Y 0.379
125 L 0.506
126 G 0.504
127 P 0.425
128 V -1.000 *
129 D 0.995
130 A -0.021
131 R 0.429
132 A 0.289
133 I -1.000 *
134 L -1.000 *
135 G -1.000 *
136 R 0.513
137 V 0.416
138 G -0.498
139 G -1.000 *
140 S -0.515
141 R 0.985
142 V -0.478
143 A -0.819
144 P 2.089
145 S -0.282
146 P -0.338
147 L 1.824
148 F -0.002
149 L -0.304
150 E -1.015
151 E 0.556
152 L -0.394
153 Q -0.440
154 Y -0.793
155 E 0.445
156 E -0.378
157 D 0.384
158 D 0.503
159 Y 0.485
160 P 0.463
161 E -0.321
162 A -1.307
163 V -0.778
164 G -0.401
165 P -1.010
166 E 0.344
167 D -0.420
168 G -0.792
169 G -0.799
170 G -0.406
171 A -0.325
172 R 0.022
173 S 0.076
174 P 0.667
175 P -0.608
176 K -1.326
177 V -0.105
178 E -0.332
179 V -0.686
180 L 0.820
181 E -0.252
182 G 0.158
183 R 0.191
184 V 0.041
185 P -0.711
186 G -0.795
187 P -0.796
188 E -0.029
189 L 0.434
190 R -0.364
191 A -1.019
192 A -1.327
193 F 0.031
194 P 2.240
195 L -0.257
196 D 0.083
197 R -0.778
198 L 0.342
199 A -1.516
200 P -0.628
201 Q -1.036
202 V 0.012
203 A -1.192
204 V -1.496
205 W -0.402
206 D -0.099
207 E -0.080
208 S -0.690
209 V -1.259
210 R 0.117
211 S -0.011
212 A 0.051
213 L -0.706
214 A 0.840
215 L -0.268
216 G 0.159
217 H -1.146
218 P -0.570
219 A -0.968
220 G -1.000
221 F -0.486
222 Y -0.418
223 P 0.060
224 C -1.068
225 P -0.719
226 D -1.250
227 S -0.105
228 A -0.945
229 F 0.027
230 G -0.985
231 L -1.232
232 S 0.015
233 R -0.726
234 V -0.704
235 G 3.100
236 V -0.703
237 M 2.270
238 H 1.254
239 F -0.364
240 A -0.414
241 S -0.374
242 P 0.301
243 D -0.851
244 N -0.708
245 P -0.924
246 A -0.270
247 V -0.984
248 F -0.151
249 F 0.113
250 R -0.270
251 Q 2.032
252 T 1.133
253 L 0.110
254 Q -0.578
255 Q 3.100
256 G 1.692
257 E -1.334
258 A 0.336
259 L 2.069
260 A -0.430
261 W 0.401
262 Y -0.705
263 I 0.615
264 T -0.373
265 G -0.411
266 D -0.379
267 G -0.353
268 I 0.632
269 L -1.488
270 D -0.756
271 L -0.340
272 T 0.438
273 D -0.436
274 R -0.354
275 R -0.415
276 T -0.940
277 K -0.630
278 T -0.644
279 S -0.758
280 P -0.340
281 A -1.080
282 Q -1.442
283 A 1.162
284 M 0.183
285 S -0.992
286 F 2.252
287 L 2.252
288 A -0.585
289 D 2.048
290 A 1.542
291 V -0.452
292 V 0.415
293 R 0.785
294 L 0.011
295 A 0.302
296 I -0.004
297 N 1.546
298 G 0.062
299 W -0.995
300 V -1.251
301 C -0.755
302 G 0.816
303 T -0.806
304 R 0.079
305 L -0.352
306 H 1.244
307 A 0.027
308 E -1.009
309 A -0.948
310 R -0.622
311 G -1.099
312 S -1.082
313 D -1.538
314 L -0.412
315 D -1.067
316 D -0.775
317 R -0.324
318 A -0.686
319 A -0.607
320 E -0.710
321 L 0.110
322 R -0.208
323 R -1.246
324 Q -1.171
325 F -0.835
326 A -0.371
327 S -0.386
328 L -0.943
329 T -0.249
330 A -0.515
331 L -0.577
332 R 0.260
333 P 0.888
334 V -0.984
335 G 0.081
336 A -0.723
337 A -0.275
338 A -0.876
339 V -0.308
340 P -1.007
341 L -0.290
342 L 0.722
343 S -1.406
344 A -0.850
345 G -1.426
346 G -0.231
347 L -1.054
348 V -1.817
349 S -0.975
350 P 0.928
351 Q -1.301
352 S -1.376
353 G 0.959
354 P 2.270
355 D -1.735
356 A 0.417
357 A 0.716
358 V -0.053
359 F -0.284
360 R 3.100
361 S 0.860
362 S 1.203
363 L -0.344
364 G 3.100
365 S 1.779
366 L 0.815
367 L 0.201
368 Y 2.254
369 W 2.271
370 P 0.518
371 G 1.277
372 V 1.515
373 R 3.100
374 A -0.700
375 L 0.019
376 L 0.808
377 D -0.636
378 R -1.310
379 D -0.438
380 C -1.233
381 R -0.603
382 V -0.753
383 A -0.677
384 A 0.084
385 R 3.100
386 Y 1.350
387 A 2.223
388 G -0.346
389 R -0.777
390 M -0.988
391 T -0.061
392 Y -0.427
393 L -0.935
394 A 1.535
395 T 1.276
396 G -0.746
397 A 0.334
398 L 2.254
399 L 1.870
400 A 1.140
401 R 1.533
402 F -0.728
403 N 0.461
404 P 1.111
405 D -0.955
406 A -0.223
407 V 0.030
408 R -0.446
409 C 0.203
410 V -0.763
411 L -0.693
412 T -1.468
413 R 0.140
414 E 1.961
415 A -0.083
416 A 0.087
417 F -0.803
418 L 0.847
419 G 0.346
420 R -0.012
421 V -0.730
422 L 0.114
423 D 1.008
424 V 1.006
425 L -0.932
426 A 0.291
427 V 0.089
428 M 0.444
429 A -0.138
430 E -0.068
431 Q -1.310
432 T 0.603
433 V 0.538
434 Q 0.597
435 W 1.302
436 L 0.464
437 S -0.599
438 V -0.405
439 V 0.811
440 V -0.756
441 G 0.607
442 A -0.400
443 R -0.767
444 L 1.586
445 H 0.091
446 P 0.111
447 H -1.240
448 V -0.962
449 H -1.222
450 H -0.704
451 P -0.959
452 A 0.809
453 F 0.474
454 A -0.618
455 D -0.815
456 V 0.142
457 A -1.016
458 R -1.847
459 E -1.181
460 E -1.684
461 L -0.269
462 F -0.768
463 R -0.743
464 A -0.735
465 L 0.158
466 P 3.100
467 L 1.312
468 G 0.340
469 S 2.261
470 P -1.043
471 A -0.793
472 V 1.138
473 V -0.457
474 G -0.699
475 A 1.389
476 E 3.100
477 H -1.281
478 E 0.016
479 A -0.081
480 L 0.937
481 G -0.039
482 D -0.983
483 T -1.519
484 A -0.714
485 A -0.390
486 R -1.236
487 R -0.795
488 L -0.382
489 L -0.756
490 A -0.411
491 N -0.991
492 S -0.329
493 G 0.962
494 L 1.549
495 N -0.198
496 A -0.952
497 V 0.007
498 L -0.018
499 G -1.235
500 A -0.744
501 A 1.756
502 V 1.254
503 Y -0.934
504 A 0.778
505 L -0.068
506 H 1.369
507 T 1.718
508 A 1.997
509 L 0.190
510 A 1.225
511 T -0.751
512 V 0.230
513 T 0.287
514 L -0.978
515 K 0.048
516 Y 0.441
517 A 0.357
518 R -0.948
519 A -0.296
520 C -0.917
521 G -0.411
522 D -0.065
523 A -1.040
524 H -0.959
525 R -0.689
526 R -0.820
527 R -0.404
528 D -0.334
529 D -0.704
530 A -0.678
531 A 0.070
532 A 0.068
533 T -0.580
534 R -0.380
535 A 0.909
536 I -0.155
537 L 1.156
538 A 1.707
539 A -0.639
540 G 0.339
541 L 0.544
542 V 0.895
543 L 1.497
544 Q 3.100
545 R 3.100
546 L 0.414
547 L 0.704
548 G 3.100
549 F 0.243
550 A 0.615
551 D 1.250
552 T -0.416
553 V 0.073
554 V 0.671
555 A -0.323
556 C -0.295
557 V 0.308
558 T 0.074
559 L -0.326
560 A 0.953
561 A 1.253
562 F -0.668
563 D -0.281
564 G 0.716
565 G 1.995
566 F -0.897
567 T -1.044
568 A -0.712
569 P 0.861
570 E -0.708
571 V 1.741
572 G -0.782
573 T -0.961
574 Y -0.476
575 T 1.362
576 P 0.992
577 L -0.816
578 R 0.179
579 Y 3.100
580 A -1.003
581 C -1.294
582 V 0.724
583 L -0.433
584 R -0.093
585 A 0.939
586 T -0.077
587 Q -1.007
588 P 0.730
589 L 2.189
590 Y 0.623
591 A 0.368
592 R -0.076
593 T 0.033
594 T 1.199
595 P 0.065
596 A -0.547
597 K -0.361
598 F 1.912
599 W 1.242
600 A -0.331
601 D 0.205
602 V 1.214
603 R 0.675
604 A -0.292
605 A 0.224
606 A 0.202
607 E 0.095
608 H -1.063
609 V 0.820
610 D -0.742
611 L 1.744
612 R -0.640
613 P 1.257
614 A -0.898
615 S -0.092
616 S 0.580
617 A -0.461
618 P 1.509
619 R -0.296
620 A -1.006
621 P -0.850
622 V -0.744
623 S 0.027
624 G -1.031
625 T 0.064
626 A -0.270
627 D -0.713
628 P -0.447
629 A -1.029
630 F 0.005
631 L -0.473
632 L -0.354
633 K -0.273
634 D 0.008
635 L 0.256
636 E -0.155
637 P -1.456
638 F 0.529
639 P -0.473
640 P 0.662
641 A -0.093
642 P 0.339
643 V -0.503
644 S -1.299
645 G -0.422
646 G -0.963
647 S -0.787
648 V -0.166
649 L 3.100
650 G 3.100
651 P -0.280
652 R -1.011
653 V 1.309
654 R 0.326
655 V -0.225
656 V -0.461
657 D 0.144
658 I -1.130
659 M 0.137
660 S -1.053
661 Q -0.076
662 F -0.091
663 R 0.143
664 K -0.716
665 L -0.285
666 L 0.939
667 M -0.435
668 G 2.161
669 D -0.070
670 E -1.048
671 G -0.728
672 A -0.091
673 A -0.786
674 A -0.284
675 L 0.217
676 R 0.053
677 A -0.390
678 H 1.037
679 V -1.000 *
680 S -1.000 *
681 G -1.000 *
682 R -1.000 *
683 R -1.000 *
684 A -1.000 *
685 T -1.000 *
686 G -1.000 *
687 L -1.000 *
688 G -1.000 *
689 G -1.000 *
690 P -1.000 *
691 P -1.000 *
692 R -1.000 *
693 P -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 91.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MSAREPAGRR RRASTRPRAS PVADEPAGDG VGFMGYLRAV FRGDDDSELE ALEEMAGDEP
70 80 90 100 110 120
PVRRRREGPR ARRRRASEAP PTSHRRASRQ RPGPDAARSQ SVRGRLDDDD EVPRGPPQAR
130 140 150 160 170 180
QGGYLGPVDA RAILGRVGGS RVAPSPLFLE ELQYEEDDYP EAVGPEDGGG ARSPPKVEVL
190 200 210 220 230 240
EGRVPGPELR AAFPLDRLAP QVAVWDESVR SALALGHPAG FYPCPDSAFG LSRVGVMHFA
250 260 270 280 290 300
SPDNPAVFFR QTLQQGEALA WYITGDGILD LTDRRTKTSP AQAMSFLADA VVRLAINGWV
310 320 330 340 350 360
CGTRLHAEAR GSDLDDRAAE LRRQFASLTA LRPVGAAAVP LLSAGGLVSP QSGPDAAVFR
370 380 390 400 410 420
SSLGSLLYWP GVRALLDRDC RVAARYAGRM TYLATGALLA RFNPDAVRCV LTREAAFLGR
430 440 450 460 470 480
VLDVLAVMAE QTVQWLSVVV GARLHPHVHH PAFADVAREE LFRALPLGSP AVVGAEHEAL
490 500 510 520 530 540
GDTAARRLLA NSGLNAVLGA AVYALHTALA TVTLKYARAC GDAHRRRDDA AATRAILAAG
550 560 570 580 590 600
LVLQRLLGFA DTVVACVTLA AFDGGFTAPE VGTYTPLRYA CVLRATQPLY ARTTPAKFWA
610 620 630 640 650 660
DVRAAAEHVD LRPASSAPRA PVSGTADPAF LLKDLEPFPP APVSGGSVLG PRVRVVDIMS
670 680 690
QFRKLLMGDE GAAALRAHVS GRRATGLGGP PRP
pUL47 is one of the HSV tegument proteins proposed to shuttle between the nucleus and cytoplasm and binds to RNA transcripts. Residues 658-667 target an NLS-containing reporter protein to the cytoplasm in a LMB-sensitive manner. Funk et al. also found this protein to have nuclear export activity using Nuclear EXport Trapped by RAPamycin (NEX-TRAP). Assay for LMB sensitivity using Myc-tagged protein showed exclusive nuclear localization of pUL47 and therefore LMB sensitivity was not established. Putative NES identified in this study is different from that of Williams et al.
[1]. "Characterization of a CRM1-dependent nuclear export signal in the C terminus of herpes simplex virus type 1 tegument protein UL47"
Williams P, Verhagen J, Elliott G. (2008)
J. Virol.,
82:10946-10952
PubMed[2]. "Comprehensive analysis of nuclear export of herpes simplex virus type 1 tegument proteins and their Epstein-Barr virus orthologs"
Funk C, Raschbichler V, Lieber D, Wetschky J, Arnold EK, Leimser J, Biggel M, Friedel CC, Ruzsics Z, Bailer SM. (2019)
Traffic,
20:152-167
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.