Summary for nsP2 (VEE) (NES ID: 92)
Full Name
Non-structural protein 2 of Venezuelan Equine Encephalitis Virus
UniProt
Alternative Names
None
Organism
Venezuelan equine encephalitis virus (strain P676) (VEEV)
Experimental Evidence for CRM1-mediated Export
Mutations That Affect Nuclear Export
Mutations That Affect CRM1 Binding
Unknown
Functional Export Signals
*shown as underlined residues in the full sequence
521VRFFGLDLDSGLFSAPTVPLSIRNNHWDNSPSPNMYGLNKEVVRQLSRRYPQLPRAVATG
RVYDMNTGTLRNYDPRINLVPVNRRLPHALVLHHNEHPQSDFSSFVSKLKGRTVLVVGEK
LSVPGKKVDWLSDQPEATFRARLDLGIPGDVPKYDIVFINVRTPYKYHHYQQCEDHAIKL
SMLTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCKPKSSHEETEVLFV
FIGYDRKARTHNPYKLSSTLTNIYTGSRLHEAGC
794 Ref.1Nuclear import and export of Venezuelan equine encephalitis virus nonstructural protein 2, Montgomery et al., J. Virol., 2007
Secondary Structure of Export Signal
Other Residues Important for Export
Unknown
Sequence
Show FASTA Format
>gi|25140291|ref|NP_740697.1| putative nonstructural protein nsP2 [Venezuelan equine encephalitis virus]
GSVETPRGLIKVTSYAGEDKIGSYAVLSPQAVLKSEKLSCIHPLAEQVIVITHSGRKGRYAVEPYHGKVV
VPEGHAIPVQDFQALSESATIVYNEREFVNRYLHHIATHGGALNTDEEYYKTVKPSEHDGEYLYDIDRKQ
CVKKELVTGLGLTGELVDPPFHEFAYESLRTRPAAPYQVPTIGVYGVPGSGKSGIIKSAVTKKDLVVSAK
KENCAEIIRDVKKMKGLDVNARTVDSVLLNGCKHPVETLYIDEAFACHAGTLRALIAIIRPKKAVLCGDP
KQCGFFNMMCLKVHFNHEICTQVFHKSISRRCTKSVTSVVSTLFYDKRMRTTNPKETKIVIDTTGSTKPK
QDDLILTCFRGWVKQLQIDYKGNEIMTAAASQGLTRKGVYAVRYKVNENPLYAPTSEHVNVLLTRTEDRI
VWKTLAGDPWIKILTAKYPGNFTATIEEWQAEHDAIMRHILERPDPTDVFQNKANVCWAKALVPVLKTAG
IDMTTEQWNTVDYFETDKAHSAEIVLNQLCVRFFGLDLDSGLFSAPTVPLSIRNNHWDNSPSPNMYGLNK
EVVRQLSRRYPQLPRAVATGRVYDMNTGTLRNYDPRINLVPVNRRLPHALVLHHNEHPQSDFSSFVSKLK
GRTVLVVGEKLSVPGKKVDWLSDQPEATFRARLDLGIPGDVPKYDIVFINVRTPYKYHHYQQCEDHAIKL
SMLTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCKPKSSHEETEVLFVFIGYDRKART
HNPYKLSSTLTNIYTGSRLHEAGC
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 953467763599703687401114863547776103445452135776634415876511
Pred: CCCCCCCCCEEEEECCCCCCEEEEEEECHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCE
AA: GSVETPRGLIKVTSYAGEDKIGSYAVLSPQAVLKSEKLSCIHPLAEQVIVITHSGRKGRY
10 20 30 40 50 60
Conf: 221037622210574237310001244412752010102220021000278778773230
Pred: EEECCCCEEEEECCCCCCCCCHHCCCCCCEEEECCHHCCCCCEEEEHHCCCCCCCCCCCC
AA: AVEPYHGKVVVPEGHAIPVQDFQALSESATIVYNEREFVNRYLHHIATHGGALNTDEEYY
70 80 90 100 110 120
Conf: 450677777212885698503200100240674146899803645551248999998243
Pred: EECCCCCCCCCEEEECCCCCEECCCEECCCEEECCCCCCCCHHHHHHHCCCCCCCCCCCC
AA: KTVKPSEHDGEYLYDIDRKQCVKKELVTGLGLTGELVDPPFHEFAYESLRTRPAAPYQVP
130 140 150 160 170 180
Conf: 999833789983326731248885898389022899999873203666632331023116
Pred: EEEEECCCCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
AA: TIGVYGVPGSGKSGIIKSAVTKKDLVVSAKKENCAEIIRDVKKMKGLDVNARTVDSVLLN
190 200 210 220 230 240
Conf: 999982359972110010519999998209849999228874021004540112023001
Pred: CCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCHHHHCCCCCC
AA: GCKHPVETLYIDEAFACHAGTLRALIAIIRPKKAVLCGDPKQCGFFNMMCLKVHFNHEIC
250 260 270 280 290 300
Conf: 219986541148145888750333487035317842149971386446689988999972
Pred: CCEEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEE
AA: TQVFHKSISRRCTKSVTSVVSTLFYDKRMRTTNPKETKIVIDTTGSTKPKQDDLILTCFR
310 320 330 340 350 360
Conf: 113889875589963210100265447489998507888876799992489730320529
Pred: CHHHHHHHHCCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCEE
AA: GWVKQLQIDYKGNEIMTAAASQGLTRKGVYAVRYKVNENPLYAPTSEHVNVLLTRTEDRI
370 380 390 400 410 420
Conf: 999802682100001246775201388899859999987423999831012233300000
Pred: EEEECCCCCCEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AA: VWKTLAGDPWIKILTAKYPGNFTATIEEWQAEHDAIMRHILERPDPTDVFQNKANVCWAK
430 440 450 460 470 480
Conf: 110223236844315643011333237898602211021433205313433445898455
Pred: CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCCC
AA: ALVPVLKTAGIDMTTEQWNTVDYFETDKAHSAEIVLNQLCVRFFGLDLDSGLFSAPTVPL
490 500 510 520 530 540
Conf: 000487789999987787488998977523678766566831001222102699998743
Pred: CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
AA: SIRNNHWDNSPSPNMYGLNKEVVRQLSRRYPQLPRAVATGRVYDMNTGTLRNYDPRINLV
550 560 570 580 590 600
Conf: 478877762001234469997678876136967999604456799637870069997378
Pred: CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCEE
AA: PVNRRLPHALVLHHNEHPQSDFSSFVSKLKGRTVLVVGEKLSVPGKKVDWLSDQPEATFR
610 620 630 640 650 660
Conf: 861569999999600999934688765302335567999973147775233898179999
Pred: EECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
AA: ARLDLGIPGDVPKYDIVFINVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSI
670 680 690 700 710 720
Conf: 430433302468988640201435535998766746999998305987667976422100
Pred: EEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCH
AA: GYGYADRASESIIGAIARQFKFSRVCKPKSSHEETEVLFVFIGYDRKARTHNPYKLSSTL
730 740 750 760 770 780
Conf: 00012463233589
Pred: HCCCCCCCCCCCCC
AA: TNIYTGSRLHEAGC
790
Show Conservation Score by AL2CO
1 G 1.992
2 S 0.310
3 V 1.042
4 E 0.498
5 T 1.191
6 P 1.191
7 R 1.992
8 G -0.358
9 L -0.923
10 I 0.319
11 K 0.920
12 V 0.938
13 T -0.324
14 S -0.451
15 Y -0.348
16 A -1.138
17 G -0.871
18 E 0.471
19 D -1.691
20 K -0.699
21 I -0.028
22 G 1.992
23 S -0.941
24 Y 1.992
25 A -0.350
26 V 0.485
27 L -0.022
28 S 1.003
29 P 1.992
30 Q -0.549
31 A -0.003
32 V 1.992
33 L 1.992
34 K -0.064
35 S 0.433
36 E -1.339
37 K 1.213
38 L 1.992
39 S -0.890
40 C -0.436
41 I -0.063
42 H 1.191
43 P -0.376
44 L 1.992
45 A 1.992
46 E 1.105
47 Q 0.982
48 V 0.565
49 I -0.874
50 V -0.373
51 I -0.365
52 T 1.191
53 H 1.992
54 S -0.358
55 G 1.992
56 R 1.992
57 K -0.445
58 G 1.992
59 R 1.992
60 Y 1.992
61 A -0.666
62 V 1.191
63 E 0.499
64 P -0.482
65 Y 1.191
66 H -0.337
67 G 0.504
68 K 0.913
69 V 1.210
70 V 0.430
71 V -0.085
72 P 1.992
73 E -0.714
74 G 1.992
75 H -1.172
76 A 0.055
77 I -0.081
78 P -0.607
79 V -0.710
80 Q -1.124
81 D -0.436
82 F 1.992
83 Q 0.074
84 A 1.213
85 L 1.216
86 S 0.968
87 E 1.992
88 S 1.992
89 A 1.992
90 T 1.218
91 I 0.305
92 V 1.191
93 Y 0.998
94 N 1.992
95 E 1.191
96 R 1.191
97 E 1.191
98 F 0.632
99 V -0.312
100 N 0.597
101 R 1.992
102 Y 0.451
103 L 1.992
104 H -0.626
105 H 0.496
106 I 1.191
107 A 1.992
108 T -0.710
109 H -0.352
110 G 1.992
111 G -0.093
112 A 1.112
113 L 0.462
114 N 1.992
115 T 1.992
116 D 1.072
117 E 1.207
118 E 1.191
119 Y -0.720
120 Y 1.219
121 K 0.052
122 T -1.332
123 V -0.643
124 K -0.326
125 P -0.330
126 S -1.445
127 E -0.927
128 H -0.582
129 D -0.273
130 G -0.778
131 E 0.569
132 Y 0.529
133 L 0.588
134 Y 0.450
135 D 0.636
136 I -0.319
137 D 1.023
138 R -0.675
139 K 0.080
140 Q -1.147
141 C 0.650
142 V -0.193
143 K 0.077
144 K -0.573
145 E -0.600
146 L -0.641
147 V 0.128
148 T -1.051
149 G 0.141
150 L -0.563
151 G -0.260
152 L 0.580
153 T -0.853
154 G 1.057
155 E 0.916
156 L 0.081
157 V -0.009
158 D -0.589
159 P 1.231
160 P 0.650
161 F 0.046
162 H 1.057
163 E 0.510
164 F 0.350
165 A 0.650
166 Y -0.243
167 E 0.659
168 S -0.038
169 L 1.263
170 R -0.521
171 T -0.884
172 R 0.550
173 P 0.669
174 A -0.369
175 A -1.100
176 P -0.183
177 Y -1.030
178 Q -1.138
179 V -0.595
180 P -1.122
181 T 0.003
182 I -0.306
183 G 0.937
184 V 1.063
185 Y -0.148
186 G 1.992
187 V 1.103
188 P 1.286
189 G 1.992
190 S 0.461
191 G 1.992
192 K 1.992
193 S 0.969
194 G 0.322
195 I 0.544
196 I 1.102
197 K -0.172
198 S -1.056
199 A -1.053
200 V 0.499
201 T -0.471
202 K -1.469
203 K -1.438
204 D 0.712
205 L 0.722
206 V 1.072
207 V -0.428
208 S 1.090
209 A -0.556
210 K 0.499
211 K 0.999
212 E 0.539
213 N 0.991
214 C 0.126
215 A -1.531
216 E 0.482
217 I 1.102
218 I -0.981
219 R -0.971
220 D 0.075
221 V 0.129
222 K -0.845
223 K -0.409
224 M -1.806
225 K 0.223
226 G -0.865
227 L -0.538
228 D -0.874
229 V -0.300
230 N -1.358
231 A -0.292
232 R 0.958
233 T 1.992
234 V 1.992
235 D 1.992
236 S 1.992
237 V -0.459
238 L 1.278
239 L 0.569
240 N 0.245
241 G -0.252
242 C -0.895
243 K -1.124
244 H -1.178
245 P -1.480
246 V -1.028
247 E -0.533
248 T -0.378
249 L 1.992
250 Y -0.020
251 I 0.360
252 D 1.992
253 E 1.992
254 A 0.710
255 F 0.006
256 A 0.096
257 C 0.129
258 H 1.992
259 A 0.026
260 G 1.992
261 T 0.085
262 L 0.991
263 R -0.252
264 A 0.129
265 L -0.236
266 I 0.556
267 A -0.521
268 I -0.521
269 I -0.233
270 R -0.246
271 P 0.129
272 K -0.569
273 K 0.577
274 A 0.109
275 V 0.101
276 L 0.556
277 C 0.033
278 G 1.992
279 D 1.992
280 P 0.120
281 K 0.126
282 Q 1.992
283 C 0.074
284 G 0.475
285 F 1.297
286 F -0.250
287 N 1.293
288 M -0.358
289 M 0.359
290 C -0.236
291 L -0.616
292 K -0.832
293 V -0.249
294 H -0.008
295 F 0.081
296 N 0.129
297 H -0.834
298 E -0.915
299 I -0.007
300 C -0.502
301 T 0.390
302 Q -1.500
303 V -0.216
304 F -1.146
305 H -0.632
306 K 1.072
307 S -0.340
308 I 0.128
309 S 0.937
310 R 0.491
311 R 1.992
312 C 1.102
313 T 0.394
314 K -1.067
315 S -0.428
316 V 0.532
317 T 1.102
318 S 0.098
319 V 0.002
320 V 0.937
321 S 0.126
322 T -0.303
323 L -0.171
324 F -0.029
325 Y 1.072
326 D -0.697
327 K -0.248
328 R -0.553
329 M 0.558
330 R 0.081
331 T 1.992
332 T -0.004
333 N 1.072
334 P -1.013
335 K -1.475
336 E -1.476
337 T -1.342
338 K -1.275
339 I -0.541
340 V -0.919
341 I 0.478
342 D -0.157
343 T -0.530
344 T -0.280
345 G -0.501
346 S -1.031
347 T -0.237
348 K 0.126
349 P 0.714
350 K -1.572
351 Q -1.050
352 D -0.615
353 D 0.007
354 L -0.248
355 I -0.565
356 L 0.419
357 T 0.226
358 C 0.550
359 F 0.714
360 R 0.122
361 G 0.126
362 W -0.157
363 V 0.122
364 K 1.286
365 Q 0.075
366 L 0.271
367 Q -0.312
368 I -0.396
369 D -0.563
370 Y 0.550
371 K -0.898
372 G -0.808
373 N -0.794
374 E -0.148
375 I 0.225
376 M -0.227
377 T 1.306
378 A 0.475
379 A 0.937
380 A 0.991
381 S 0.710
382 Q 1.992
383 G 1.992
384 L 0.550
385 T 1.286
386 R 0.419
387 K -0.737
388 G -0.812
389 V 1.312
390 Y 0.100
391 A 0.499
392 V 0.712
393 R 1.992
394 Y -0.693
395 K 0.557
396 V 0.126
397 N 0.914
398 E -0.262
399 N 0.716
400 P -0.157
401 L 0.991
402 Y 1.266
403 A -0.240
404 P -1.473
405 T -1.276
406 S 0.714
407 E 0.975
408 H 0.976
409 V 0.119
410 N -0.252
411 V 1.992
412 L 0.419
413 L 0.712
414 T 0.972
415 R 1.992
416 T 0.937
417 E -0.268
418 D -1.061
419 R -0.312
420 I 0.495
421 V 0.742
422 W 0.937
423 K 0.126
424 T 1.992
425 L -0.223
426 A -0.688
427 G -0.549
428 D 1.992
429 P -0.157
430 W -0.254
431 I -0.217
432 K 0.089
433 I -1.455
434 L 0.716
435 T -0.812
436 A -0.335
437 K -1.327
438 Y 0.071
439 P -1.067
440 G 0.650
441 N -0.555
442 F 0.461
443 T -0.794
444 A 0.214
445 T 0.116
446 I -0.356
447 E -0.745
448 E -0.805
449 W -0.157
450 Q -0.591
451 A -1.471
452 E 0.550
453 H -0.157
454 D -1.492
455 A -1.290
456 I 0.526
457 M -0.337
458 R -1.126
459 H -1.445
460 I -0.041
461 L -1.510
462 E -1.117
463 R -1.318
464 P -1.649
465 D -1.653
466 P -1.495
467 T -1.322
468 D -0.592
469 V -1.069
470 F 0.133
471 Q -1.093
472 N -0.865
473 K -0.147
474 A -0.958
475 N -1.026
476 V -0.546
477 C 0.712
478 W 0.650
479 A 1.231
480 K -0.204
481 A -0.644
482 L -0.211
483 V -1.273
484 P -0.127
485 V 0.528
486 L 0.499
487 K -1.195
488 T -0.502
489 A 0.991
490 G -0.245
491 I -0.322
492 D -1.486
493 M -0.337
494 T -0.601
495 T -1.487
496 E -1.227
497 Q -0.872
498 W 0.914
499 N -0.597
500 T -0.994
501 V -0.394
502 D -1.831
503 Y -1.064
504 F 0.666
505 E -1.073
506 T -1.313
507 D 0.650
508 K -1.140
509 A -0.358
510 H -0.276
511 S 0.536
512 A -0.278
513 E -1.056
514 I -0.948
515 V 0.945
516 L 0.669
517 N 0.092
518 Q -1.522
519 L -0.541
520 C -0.812
521 V -1.062
522 R -0.007
523 F -0.909
524 F -0.576
525 G 0.716
526 L -1.143
527 D 0.667
528 L -0.315
529 D -0.327
530 S 0.532
531 G 1.261
532 L 0.067
533 F 0.515
534 S -0.171
535 A -1.143
536 P -0.924
537 T -1.622
538 V -0.549
539 P -0.273
540 L 0.535
541 S -1.038
542 I -0.589
543 R -1.364
544 N -0.894
545 N -1.259
546 H 0.526
547 W 1.992
548 D 0.531
549 N 0.126
550 S -0.591
551 P -0.870
552 S -0.256
553 P -1.597
554 N -0.954
555 M -0.021
556 Y -0.235
557 G 0.205
558 L -0.865
559 N 0.016
560 K -1.935
561 E -1.339
562 V -0.663
563 V -0.591
564 R -1.322
565 Q -1.577
566 L -1.024
567 S -1.138
568 R -0.804
569 R -0.307
570 Y -0.652
571 P 0.202
572 Q -1.519
573 L -0.875
574 P -1.618
575 R -1.299
576 A -0.618
577 V -1.354
578 A -1.445
579 T -1.259
580 G -0.282
581 R -1.096
582 V -0.959
583 Y -0.982
584 D -1.144
585 M -0.364
586 N -1.836
587 T -1.124
588 G -0.690
589 T -1.329
590 L -0.961
591 R -1.069
592 N -1.314
593 Y -0.987
594 D -0.902
595 P -0.844
596 R -1.669
597 I -1.540
598 N 1.031
599 L -0.669
600 V 0.058
601 P 1.992
602 V -1.139
603 N 1.992
604 R 1.992
605 R -0.370
606 L 1.032
607 P 1.992
608 H 1.992
609 A -0.430
610 L 1.992
611 V 0.155
612 L -0.962
613 H -1.112
614 H -0.612
615 N -1.516
616 E -1.688
617 H -1.540
618 P -1.526
619 Q -1.187
620 S -1.195
621 D -0.941
622 F -1.351
623 S -0.442
624 S -1.561
625 F -0.358
626 V -0.880
627 S -1.366
628 K -0.321
629 L -0.704
630 K -1.120
631 G -0.324
632 R -1.191
633 T -0.907
634 V -0.077
635 L 1.212
636 V 0.001
637 V 0.479
638 G 0.342
639 E -0.608
640 K -0.947
641 L -1.003
642 S -1.687
643 V -1.528
644 P -1.054
645 G -1.222
646 K 0.988
647 K -0.677
648 V 0.449
649 D -0.028
650 W 0.477
651 L -0.080
652 S 0.312
653 D 0.352
654 Q -1.371
655 P -0.694
656 E -0.921
657 A -0.010
658 T -1.117
659 F -1.216
660 R -0.998
661 A -0.984
662 R -0.894
663 L 1.191
664 D -1.300
665 L -0.615
666 G 1.191
667 I -0.080
668 P 1.216
669 G -1.327
670 D -1.530
671 V -0.714
672 P 0.427
673 K -0.677
674 Y 0.432
675 D 1.209
676 I -0.878
677 V 0.521
678 F -0.009
679 I 0.434
680 N 0.448
681 V -0.677
682 R -1.187
683 T 0.130
684 P -0.048
685 Y 0.031
686 K -0.243
687 Y -1.349
688 H 1.207
689 H 1.992
690 Y 1.081
691 Q 0.130
692 Q 1.207
693 C 1.992
694 E 1.003
695 D 1.070
696 H 1.992
697 A 0.472
698 I -0.726
699 K -0.669
700 L -0.037
701 S -0.736
702 M 0.433
703 L 0.592
704 T -0.451
705 K -0.427
706 K -0.089
707 A 0.500
708 C 0.389
709 L -1.820
710 H -0.675
711 L 0.503
712 N -0.387
713 P 0.066
714 G 1.992
715 G 1.207
716 T -0.610
717 C 0.013
718 V -0.401
719 S -0.751
720 I -0.687
721 G -0.407
722 Y 1.992
723 G 1.992
724 Y -0.284
725 A 1.992
726 D 1.992
727 R 0.558
728 A -1.194
729 S 0.987
730 E 1.992
731 S -1.005
732 I 0.433
733 I 0.354
734 G -0.924
735 A -0.281
736 I -0.040
737 A -0.301
738 R 1.207
739 Q -0.328
740 F 1.992
741 K -1.163
742 F -0.117
743 S -0.965
744 R -0.092
745 V 0.924
746 C -0.741
747 K -0.068
748 P 0.528
749 K -1.542
750 S -0.895
751 S -0.472
752 H -1.514
753 E -0.341
754 E 0.551
755 T 0.592
756 E 1.992
757 V 0.463
758 L -0.661
759 F 0.913
760 V -0.685
761 F 1.088
762 I -0.985
763 G -1.157
764 Y -0.058
765 D 1.992
766 R 1.086
767 K 0.404
768 A -1.348
769 R 1.102
770 T -1.181
771 H -1.354
772 N -0.382
773 P -0.665
774 Y -0.909
775 K -1.372
776 L -0.569
777 S 0.330
778 S -2.083
779 T -1.209
780 L -0.043
781 T -0.096
782 N -0.715
783 I -0.377
784 Y 0.470
785 T -0.984
786 G 0.083
787 S -1.150
788 R -1.189
789 L -0.935
790 H -0.414
791 E -0.468
792 A 1.126
793 G 1.992
794 C -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 92.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
GSVETPRGLI KVTSYAGEDK IGSYAVLSPQ AVLKSEKLSC IHPLAEQVIV ITHSGRKGRY
70 80 90 100 110 120
AVEPYHGKVV VPEGHAIPVQ DFQALSESAT IVYNEREFVN RYLHHIATHG GALNTDEEYY
130 140 150 160 170 180
KTVKPSEHDG EYLYDIDRKQ CVKKELVTGL GLTGELVDPP FHEFAYESLR TRPAAPYQVP
190 200 210 220 230 240
TIGVYGVPGS GKSGIIKSAV TKKDLVVSAK KENCAEIIRD VKKMKGLDVN ARTVDSVLLN
250 260 270 280 290 300
GCKHPVETLY IDEAFACHAG TLRALIAIIR PKKAVLCGDP KQCGFFNMMC LKVHFNHEIC
310 320 330 340 350 360
TQVFHKSISR RCTKSVTSVV STLFYDKRMR TTNPKETKIV IDTTGSTKPK QDDLILTCFR
370 380 390 400 410 420
GWVKQLQIDY KGNEIMTAAA SQGLTRKGVY AVRYKVNENP LYAPTSEHVN VLLTRTEDRI
430 440 450 460 470 480
VWKTLAGDPW IKILTAKYPG NFTATIEEWQ AEHDAIMRHI LERPDPTDVF QNKANVCWAK
490 500 510 520 530 540
ALVPVLKTAG IDMTTEQWNT VDYFETDKAH SAEIVLNQLC VRFFGLDLDS GLFSAPTVPL
550 560 570 580 590 600
SIRNNHWDNS PSPNMYGLNK EVVRQLSRRY PQLPRAVATG RVYDMNTGTL RNYDPRINLV
610 620 630 640 650 660
PVNRRLPHAL VLHHNEHPQS DFSSFVSKLK GRTVLVVGEK LSVPGKKVDW LSDQPEATFR
670 680 690 700 710 720
ARLDLGIPGD VPKYDIVFIN VRTPYKYHHY QQCEDHAIKL SMLTKKACLH LNPGGTCVSI
730 740 750 760 770 780
GYGYADRASE SIIGAIARQF KFSRVCKPKS SHEETEVLFV FIGYDRKART HNPYKLSSTL
790
TNIYTGSRLH EAGC
3D Structures in PDB
2HWK (X-Ray,2.45 Å resolution)
Comments
The VEE nsP2 has several enzymatic activities and is a multifunctional protein that is important for a functional alphavirus replication complex. nsP2 is the only VEE protein that is present in the nucleus. V526A/L528A double mutations abolished VEE viability.
References
[1]. "Nuclear import and export of Venezuelan equine encephalitis virus nonstructural protein 2"
Montgomery SA, Johnston RE. (2007)
J. Virol.,
81:10268-10279
PubMed[2]. "The crystal structure of the Venezuelan equine encephalitis alphavirus nsP2 protease"
Russo AT, White MA, Watowich SJ. (2006)
structure,
14:1449-1458
PubMed
User Input
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