Summary for p37 protein of ASFV (NES ID: 97)
Full Name
p37 protein of African Swine Fever Virus
UniProt
Alternative Names
p37 protein cleaved from polyprotein pp220
Organism
African swine fever virus
Experimental Evidence for CRM1-mediated Export
Mutations That Affect Nuclear Export
Mutations That Affect CRM1 Binding
Unknown
Functional Export Signals
*shown as underlined residues in the full sequence
1AALTVEELGLSKAARSQVDLNQAINTFMYYYYVAQIYSNLTHNKQE
46,
46EFQSYEENYATILGDAIAGRLMQLDTEKNARINSPAVDLARGHVGPNPGGAQEADWKAAV
SAIELEYDVKRRFYRALEGLDLYLKNITKTFVNNIDSIQTVQQMLDGVRIIGRWFTEATG
DTLAQVFESFPTSAGNDSNVFTDNAPAGHYYEKVAAEIQQGRSVGTLRPVRASQAKNIRD
LIGRSLSNF
234 Ref.1Nuclear export of African swine fever virus p37 protein occurs through two distinct pathways and is mediated by three independent signals, Eulalio et al., J. Virol., 2006
Secondary Structure of Export Signal
Unknown
Other Residues Important for Export
Unknown
Sequence
Show FASTA Format
>gi|9628199|sp|Q08358.3|PP220_ASFB7 Polyprotein pp220 (the section of p37) OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=Ba71V-92 PE=1 SV=3
AALTVEELGLSKAARSQVDLNQAINTFMYYYYVAQIYSNLTHNKQEFQSYEENYATILGDAIAGRLMQLDTEKNARIN
SPAVDLARGHVGPNPGGAQEADWKAAVSAIELEYDVKRRFYRALEGLDLYLKNITKTFVN
NIDSIQTVQQMLDGVRIIGRWFTEATGDTLAQVFESFPTSAGNDSNVFTDNAPAGHYYEK
VAAEIQQGRSVGTLRPVRASQAKNIRDLIGRSLSNFQALKNIINAFARIGDMLGGEELRQ
MVPMSPLQIYKTLLEYIQHSALSVGLKNLNQSEIGGQRVALARTPEEAAQRVYLSTVRVN
DALSTRWETEDVFFTFMLKSMAAKIFIVLGIYDMFERPEPVYKLIPTRMILGGA
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 975133403235654112288887899999999998730243256643354445677657
Pred: CCCCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AA: AALTVEELGLSKAARSQVDLNQAINTFMYYYYVAQIYSNLTHNKQEFQSYEENYATILGD
10 20 30 40 50 60
Conf: 653221012421112458840001256778999984201067644243246576788998
Pred: HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AA: AIAGRLMQLDTEKNARINSPAVDLARGHVGPNPGGAQEADWKAAVSAIELEYDVKRRFYR
70 80 90 100 110 120
Conf: 520302453112456521561389999963101552000000025348998763688889
Pred: HHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEEECHHCCCCCHHHHHHHHCCCCCC
AA: ALEGLDLYLKNITKTFVNNIDSIQTVQQMLDGVRIIGRWFTEATGDTLAQVFESFPTSAG
130 140 150 160 170 180
Conf: 988743578888604899999985064022145100333310577630121117988999
Pred: CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
AA: NDSNVFTDNAPAGHYYEKVAAEIQQGRSVGTLRPVRASQAKNIRDLIGRSLSNFQALKNI
190 200 210 220 230 240
Conf: 998653310015132101355881351698999985321110133466555576144610
Pred: HHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
AA: INAFARIGDMLGGEELRQMVPMSPLQIYKTLLEYIQHSALSVGLKNLNQSEIGGQRVALA
250 260 270 280 290 300
Conf: 494887501123556634322235334116679978865566656320000236884221
Pred: CCHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AA: RTPEEAAQRVYLSTVRVNDALSTRWETEDVFFTFMLKSMAAKIFIVLGIYDMFERPEPVY
310 320 330 340 350 360
Conf: 133301102699
Pred: CCCCCCHHCCCC
AA: KLIPTRMILGGA
370
Show Conservation Score by AL2CO
1 A 0.576
2 A 0.576
3 L 0.576
4 T 0.576
5 V 0.576
6 E 0.576
7 E 0.576
8 L 0.576
9 G 0.576
10 L 0.576
11 S 0.576
12 K 0.576
13 A 0.576
14 A 0.576
15 R 0.576
16 S 0.576
17 Q 0.576
18 V 0.576
19 D 0.576
20 L 0.576
21 N 0.576
22 Q 0.576
23 A 0.576
24 I 0.576
25 N 0.576
26 T 0.576
27 F 0.576
28 M 0.576
29 Y 0.576
30 Y 0.576
31 Y 0.576
32 Y 0.576
33 V 0.576
34 A 0.576
35 Q 0.576
36 I 0.576
37 Y 0.576
38 S 0.576
39 N 0.576
40 L 0.576
41 T 0.576
42 H 0.576
43 N 0.576
44 K 0.576
45 Q 0.576
46 E 0.576
47 F 0.576
48 Q 0.576
49 S 0.576
50 Y 0.576
51 E 0.576
52 E 0.576
53 N 0.576
54 Y 0.576
55 A 0.576
56 T 0.576
57 I 0.576
58 L 0.576
59 G 0.576
60 D 0.576
61 A 0.576
62 I 0.576
63 A 0.576
64 G 0.576
65 R 0.576
66 L 0.576
67 M 0.576
68 Q 0.576
69 L 0.576
70 D 0.576
71 T 0.576
72 E 0.576
73 K 0.576
74 N 0.576
75 A 0.576
76 R 0.576
77 I 0.576
78 N 0.576
79 S 0.576
80 P 0.576
81 A 0.576
82 V 0.576
83 D 0.576
84 L 0.576
85 A 0.576
86 R 0.576
87 G 0.576
88 H 0.576
89 V 0.576
90 G 0.576
91 P 0.576
92 N 0.576
93 P 0.576
94 G 0.576
95 G 0.576
96 A 0.576
97 Q 0.576
98 E 0.576
99 A 0.576
100 D 0.576
101 W 0.576
102 K 0.576
103 A 0.576
104 A 0.576
105 V 0.576
106 S 0.576
107 A 0.576
108 I 0.576
109 E 0.576
110 L 0.576
111 E 0.576
112 Y 0.576
113 D 0.576
114 V 0.576
115 K 0.576
116 R 0.576
117 R 0.576
118 F 0.576
119 Y 0.576
120 R 0.576
121 A 0.576
122 L 0.576
123 E 0.576
124 G 0.576
125 L 0.576
126 D 0.576
127 L 0.576
128 Y 0.576
129 L 0.576
130 K 0.576
131 N 0.576
132 I 0.576
133 T 0.576
134 K 0.576
135 T 0.576
136 F 0.576
137 V 0.576
138 N 0.576
139 N 0.576
140 I 0.576
141 D 0.576
142 S 0.576
143 I 0.576
144 Q 0.576
145 T 0.576
146 V 0.576
147 Q 0.576
148 Q 0.576
149 M 0.576
150 L 0.576
151 D 0.576
152 G 0.576
153 V 0.576
154 R 0.576
155 I 0.576
156 I 0.576
157 G 0.576
158 R 0.576
159 W 0.576
160 F 0.576
161 T 0.576
162 E 0.576
163 A 0.576
164 T 0.576
165 G 0.576
166 D 0.576
167 T 0.576
168 L 0.576
169 A 0.576
170 Q 0.576
171 V 0.576
172 F 0.576
173 E 0.576
174 S 0.576
175 F 0.576
176 P 0.576
177 T 0.576
178 S 0.576
179 A 0.576
180 G 0.576
181 N 0.576
182 D 0.576
183 S 0.576
184 N 0.576
185 V 0.576
186 F 0.576
187 T 0.576
188 D 0.576
189 N 0.576
190 A 0.576
191 P -1.729
192 A -1.729
193 G -1.729
194 H -1.729
195 Y -1.729
196 Y -1.729
197 E -1.729
198 K 0.576
199 V -1.729
200 A -1.729
201 A -1.729
202 E -1.729
203 I -1.729
204 Q -1.729
205 Q -1.729
206 G -1.729
207 R -1.729
208 S -1.729
209 V -1.729
210 G -1.729
211 T -1.729
212 L -1.729
213 R -1.729
214 P 0.576
215 V -1.729
216 R -1.729
217 A -1.729
218 S -1.729
219 Q -1.729
220 A -1.729
221 K 0.576
222 N -1.729
223 I -1.729
224 R -1.729
225 D -1.729
226 L 0.576
227 I -1.729
228 G 0.576
229 R -1.729
230 S -1.729
231 L -1.729
232 S -1.729
233 N -1.729
234 F 0.576
235 Q -1.729
236 A -1.729
237 L 0.576
238 K 0.576
239 N -1.729
240 I -1.729
241 I -1.729
242 N -1.729
243 A -1.729
244 F -1.729
245 A -1.729
246 R -1.729
247 I -1.729
248 G -1.729
249 D -1.729
250 M -1.729
251 L 0.576
252 G 0.576
253 G -1.729
254 E -1.729
255 E -1.729
256 L -1.729
257 R -1.729
258 Q -1.729
259 M -1.729
260 V -1.729
261 P 0.576
262 M -1.729
263 S -1.729
264 P 0.576
265 L -1.729
266 Q -1.729
267 I -1.729
268 Y -1.729
269 K 0.576
270 T -1.729
271 L -1.729
272 L 0.576
273 E -1.000 *
274 Y -1.000 *
275 I -1.000 *
276 Q -1.000 *
277 H -1.000 *
278 S -1.000 *
279 A -1.000 *
280 L -1.000 *
281 S -1.000 *
282 V -1.000 *
283 G -1.000 *
284 L -1.000 *
285 K -1.000 *
286 N -1.000 *
287 L -1.000 *
288 N -1.000 *
289 Q -1.000 *
290 S -1.000 *
291 E -1.000 *
292 I -1.000 *
293 G -1.000 *
294 G -1.000 *
295 Q -1.000 *
296 R -1.000 *
297 V -1.000 *
298 A -1.000 *
299 L -1.000 *
300 A -1.000 *
301 R -1.000 *
302 T -1.000 *
303 P -1.000 *
304 E -1.000 *
305 E -1.000 *
306 A -1.000 *
307 A -1.000 *
308 Q -1.000 *
309 R -1.000 *
310 V -1.000 *
311 Y -1.000 *
312 L -1.000 *
313 S -1.000 *
314 T -1.000 *
315 V -1.000 *
316 R -1.000 *
317 V -1.000 *
318 N -1.000 *
319 D -1.000 *
320 A -1.000 *
321 L -1.000 *
322 S -1.000 *
323 T -1.000 *
324 R -1.000 *
325 W -1.000 *
326 E -1.000 *
327 T -1.000 *
328 E -1.000 *
329 D -1.000 *
330 V -1.000 *
331 F -1.000 *
332 F -1.000 *
333 T -1.000 *
334 F -1.000 *
335 M -1.000 *
336 L -1.000 *
337 K -1.000 *
338 S -1.000 *
339 M -1.000 *
340 A -1.000 *
341 A -1.000 *
342 K -1.000 *
343 I -1.000 *
344 F -1.000 *
345 I -1.000 *
346 V -1.000 *
347 L -1.000 *
348 G -1.000 *
349 I -1.000 *
350 Y -1.000 *
351 D -1.000 *
352 M -1.000 *
353 F -1.000 *
354 E -1.000 *
355 R -1.000 *
356 P -1.000 *
357 E -1.000 *
358 P -1.000 *
359 V -1.000 *
360 Y -1.000 *
361 K -1.000 *
362 L -1.000 *
363 I -1.000 *
364 P -1.000 *
365 T -1.000 *
366 R -1.000 *
367 M -1.000 *
368 I -1.000 *
369 L -1.000 *
370 G -1.000 *
371 G -1.000 *
372 A -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 97.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
AALTVEELGL SKAARSQVDL NQAINTFMYY YYVAQIYSNL THNKQEFQSY EENYATILGD
70 80 90 100 110 120
AIAGRLMQLD TEKNARINSP AVDLARGHVG PNPGGAQEAD WKAAVSAIEL EYDVKRRFYR
130 140 150 160 170 180
ALEGLDLYLK NITKTFVNNI DSIQTVQQML DGVRIIGRWF TEATGDTLAQ VFESFPTSAG
190 200 210 220 230 240
NDSNVFTDNA PAGHYYEKVA AEIQQGRSVG TLRPVRASQA KNIRDLIGRS LSNFQALKNI
250 260 270 280 290 300
INAFARIGDM LGGEELRQMV PMSPLQIYKT LLEYIQHSAL SVGLKNLNQS EIGGQRVALA
310 320 330 340 350 360
RTPEEAAQRV YLSTVRVNDA LSTRWETEDV FFTFMLKSMA AKIFIVLGIY DMFERPEPVY
370
KLIPTRMILG GA
3D Structures in PDB
Not Available
Comments
ASFV causes lethal hemorrhagic disease in domestic pigs. p37 is a major structural protein in ASFV that shuttles between the nucleus and the cytoplasm. p37 has 3 NESs: NESs in segments 1-14 and 140-149 (mapped using deletion mutants of segments 1-46 and 46-234 in the presence and absence of LMB; no reporter studies done using short NESs) and a CRM1-independent NES at the C-terminus. Export studies were also done with CRM1 knockdown (RNAi studies). p37 is nuclear early in infection but cytoplasmic later. Note that aa 122-129 resemble a NES. But deletion mutant showed that it is not functional.
References
[1]. "Nuclear export of African swine fever virus p37 protein occurs through two distinct pathways and is mediated by three independent signals"
Eulálio A, Nunes-Correia I, Carvalho AL, Faro C, Citovsky V, Salas J, Salas ML, Simões S, de Lima MC. (2006)
J. Virol.,
80:1393-1404
PubMed
User Input
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