Results list of Ferredoxin-like (plait) fold on superfamily level
Results list on SCOP superfamily level
1: b.34.14 PAZ domain
2: b.57.1 Herpes virus serine proteinase, assemblin
3: b.82.2 Clavaminate synthase-like
Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
4: b.121.4 Positive stranded ssRNA viruses
5: b.153.1 PheT/TilS domain
contains putative tRNA-binding structural motif
6: c.1.10 Aldolase
Common fold covers whole protein structure
7: c.8.5 GroEL apical domain-like
8: c.41.1 Subtilisin-like
9: c.66.1 S-adenosyl-L-methionine-dependent methyltransferases
10: c.67.1 PLP-dependent transferases
11: d.41.4 Ribosomal protein L16p/L10e
12: d.58.2 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
13: d.58.3 Protease propeptides/inhibitors
14: d.58.4 Dimeric alpha+beta barrel
dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers
15: d.58.5 GlnB-like
form timeric structures with the orthogonally packed beta-sheets
16: d.58.6 Nucleoside diphosphate kinase, NDK
17: d.58.7 RNA-binding domain, RBD
18: d.58.8 Viral DNA-binding domain
19: d.58.9 RuBisCO, large subunit, small (N-terminal) domain
C-terminal domain is beta/alpha barrel
20: d.58.10 Acylphosphatase/BLUF domain-like
21: d.58.11 EF-G C-terminal domain-like
22: d.58.12 eEF-1beta-like
23: d.58.13 Anticodon-binding domain of PheRS
24: d.58.14 Ribosomal protein S6
25: d.58.16 PAP/Archaeal CCA-adding enzyme, C-terminal domain
26: d.58.17 HMA, heavy metal-associated domain
27: d.58.18 ACT-like
regulatory domain linked to a wide range of metabolic enzymes
28: d.58.19 Bacterial exopeptidase dimerisation domain
29: d.58.20 NAD-binding domain of HMG-CoA reductase
30: d.58.21 Molybdenum cofactor biosynthesis protein C, MoaC
31: d.58.22 TRADD, N-terminal domain
32: d.58.23 Probable ACP-binding domain of malonyl-CoA ACP transacylase
33: d.58.24 CheY-binding domain of CheA
34: d.58.25 Killer toxin KP6 alpha-subunit
35: d.58.26 GHMP Kinase, C-terminal domain
common fold is elaborated with additional secondary structures
36: d.58.28 Peptide methionine sulfoxide reductase
common fold is elaborated with additional secondary structures
37: d.58.29 Nucleotide cyclase
common fold is elaborated with additional secondary structures
38: d.58.30 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
common fold is elaborated with additional secondary structures
39: d.58.31 Methyl-coenzyme M reductase subunits
each of the three different subunits, alpha, beta and gamma, contains this fold decorated with additional secondary structures
40: d.58.32 FAD-linked oxidases, C-terminal domain
duplication: contains two subdomains of this fold
41: d.58.33 Formylmethanofuran:tetrahydromethanopterin formyltransferase
duplication: contains two subdomains of this fold
42: d.58.34 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
duplication: contains two subdomains of this fold
43: d.58.38 Urease metallochaperone UreE, C-terminal domain
44: d.58.39 Glutamyl tRNA-reductase catalytic, N-terminal domain
common fold is elaborated with additional secondary structures
45: d.58.40 D-ribose-5-phosphate isomerase (RpiA), lid domain
46: d.58.41 SEA domain
47: d.58.42 N-utilization substance G protein NusG, N-terminal domain
48: d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
duplication: the N- and C-terminal halves of the whole proteins are structurally similar; each half contains two domains of this fold
49: d.58.46 eEF1-gamma domain
elaborated with additional structures
50: d.58.48 MTH1187/YkoF-like
51: d.58.50 Hypothetical protein TT1725
52: d.58.51 eIF-2-alpha, C-terminal domain
53: d.58.52 Sporulation related repeat
duplication: one domain contains two repeats of similar sequence and structure
54: d.58.53 CRISPR-associated protein
duplication: contains two subdomains of this fold
55: d.58.54 YbeD-like
56: d.58.55 DOPA-like
probable biological unit is homodimer; the extra C-terminal strand, adjacent and antiparallel to strand 4, contributes to the dimerisation interface
57: d.58.56 CcmK-like
contains extra C-terminal helix; forms compact hexameric 'tiles' of hexagonal shape
58: d.58.57 Transposase IS200-like
contains extra N-terminal hairpin and C-terminal helix, both are involved in dimerization; there can be helix-swapping in the dimer
59: d.58.58 TTP0101/SSO1404-like
contains extra C-terminal beta-strand that integrates into the beta-sheet of the other subunit in the homodimer, a probable biological unit of this superfamily
60: d.77.1 Ribosomal protein L5
61: d.86.1 eIF4e-like
62: d.89.1 Origin of replication-binding domain, RBD-like
63: d.128.1 Glutamine synthetase/guanido kinase
64: d.129.2 Phosphoglucomutase, C-terminal domain
contains a single copy of this fold and an extra beta-strand at the C-terminus
65: d.129.4 Cell-division protein ZipA, C-terminal domain
contains a single copy of this fold
66: d.129.9 RalF, C-terminal domain
contains a single copy of this fold decorated with additional structures
67: d.137.1 Monooxygenase (hydroxylase) regulatory protein
duplication: consists of two beta-alpha-(beta)-beta(2) motifs; some topological similarity to the ferredoxin-like fold
68: d.139.1 PurM C-terminal domain-like
69: d.153.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
N-terminal residue provides two catalytic groups, nucleophile and proton donor
70: d.156.1 S-adenosylmethionine decarboxylase
71: d.185.1 LuxS/MPP-like metallohydrolase
Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues
72: d.218.1 Nucleotidyltransferase
73: d.250.1 Folate-binding domain
some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase
74: d.256.1 Ta1353-like
75: d.261.1 Hypothetical protein PH1602
76: d.264.1 Prim-pol domain
77: d.265.1 Pseudouridine synthase
the active site is the most conserved structural region of the superfamily and is located between the subdomains
78: d.272.1 Dystroglycan, domain 2
79: d.280.1 Sulfolobus fructose-1,6-bisphosphatase-like
80: d.308.1 THUMP domain-like
predicted RNA-binding function
81: d.310.1 VC0467-like
82: e.8.1 DNA/RNA polymerases
"palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
83: e.38.1 Release factor
84: e.57.1 Vacuolar ATP synthase subunit C