Results list of grasp on superfamily level
Results list on SCOP superfamily level
1: a.102.1 Six-hairpin glycosidases
2: b.53.1 Ribosomal protein L25-like
3: b.142.1 DNA-binding pseudobarrel domain
4: b.168.1 HisI-like
5: c.1.8 (Trans)glycosidases
6: c.1.11 Enolase C-terminal domain-like
binds metal ion (magnesium or manganese) in conserved site inside barrel ! N-terminal alpha+beta domain is common to this superfamily
7: d.15.1 Ubiquitin-like
8: d.15.2 CAD & PB1 domains
contain extra helix; similar heterodimerization modes; possibly related to the ubiquitin-like superfamily
9: d.15.3 MoaD/ThiS
possible link between the ubiquitin-like and 2Fe-2S ferredoxin-like superfamilies
10: d.15.4 2Fe-2S ferredoxin-like
11: d.15.5 Staphylokinase/streptokinase
12: d.15.6 Superantigen toxins, C-terminal domain
13: d.15.7 Immunoglobulin-binding domains
14: d.15.8 Translation initiation factor IF3, N-terminal domain
15: d.15.9 Glutamine synthetase, N-terminal domain
16: d.15.10 TGS-like
possibly related to the ubiquitin-like and MoaD/ThiS superfamilies; some similarity to the alpha-L RNA-binding motif
17: d.15.11 Doublecortin (DC)
possibly related to the ubiquitin-like superfamily
18: d.15.12 TmoB-like
possibly related to the ubiquitin-like and/or 2Fe-2S ferredoxin-like superfamilies
19: d.15.13 Nqo1 middle domain-like
possibly evolved from 2Fe-2S ferredoxins; contains no iron-sulfur cluster
20: d.17.4 NTF2-like
has a beta-alpha(2)-beta insertion after the main helix
21: d.58.1 4Fe-4S ferredoxins
22: d.113.1 Nudix
23: d.152.1 Aldehyde ferredoxin oxidoreductase, N-terminal domain
24: d.176.1 Oxidoreductase molybdopterin-binding domain
25: d.220.1 Metal cation-transporting ATPase, ATP-binding domain N
26: d.263.1 Hypothetical protein Yml108w
27: d.269.1 BtrG-like
28: e.29.1 beta and beta-prime subunits of DNA dependent RNA-polymerase
The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit
29: e.53.1 QueA-like
30: e.58.1 Viral ssDNA binding protein
31: f.4.3 Porins
32: f.11.1 Anthrax protective antigen
33: g.3.9 Growth factor receptor domain
34: g.37.1 C2H2 and C2HC zinc fingers
35: i.1.1 Ribosome and ribosomal fragments
36: i.8.1 RNA polymerase
37: k.45.1 Ubiquitin