Results list on SCOP superfamily level

1:    b.1.2      Fibronectin type III

2:    b.1.8      Cu,Zn superoxide dismutase-like

                    has additional strand at N-terminus

3:    b.1.18     E set domains

                    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies

4:    b.2.1      Diphtheria toxin, C-terminal domain

5:    b.2.3      Bacterial adhesins

6:    b.2.5      p53-like transcription factors

7:    b.3.1      Starch-binding domain-like

8:    b.3.4      Transthyretin (synonym: prealbumin)

9:    b.3.6      Aromatic compound dioxygenase

10:   b.12.1     Lipase/lipooxygenase domain (PLAT/LH2 domain)

11:   b.21.1     Virus attachment protein globular domain

12:   b.34.11    Prokaryotic SH3-related domain

13:   b.40.4     Nucleic acid-binding proteins

14:   b.42.1     Cytokine

15:   b.42.2     Ricin B-like lectins

16:   b.42.3     Agglutinin

                    this superfamily is distinct from the ricin B-like lectin superfamily

17:   b.42.4     STI-like

18:   b.42.5     Actin-crosslinking proteins

19:   b.42.6     MIR domain

20:   b.42.7     DNA-binding protein LAG-1 (CSL)

                    contains rudiment hairpin triplet lacking one hairpin

21:   b.42.8     AbfB domain

22:   b.43.2     FucI/AraA C-terminal domain-like

23:   b.43.3     Translation proteins

24:   b.43.4     Riboflavin synthase domain-like

25:   b.43.5     Riboflavin kinase-like

26:   b.44.1     EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain

                    probably related to the second domain and its superfamiy by a circular permutation

27:   b.44.2     Aminomethyltransferase beta-barrel domain

28:   b.45.1     FMN-binding split barrel

                    related to the ferredoxin reductase-like FAD-binding domain

29:   b.46.1     FMT C-terminal domain-like

30:   b.49.1     N-terminal domain of alpha and beta subunits of F1 ATP synthase

31:   b.49.2     Alanine racemase C-terminal domain-like

                    the barrel is decorated with additional structures

32:   b.49.3     Aminopeptidase/glucanase lid domain

33:   b.50.1     Acid proteases

34:   b.55.1     PH domain-like

35:   b.58.1     PK beta-barrel domain-like

36:   b.68.1     Sialidases

37:   b.71.1     Glycosyl hydrolase domain

                    this domain is C-terminal to the catalytic beta/alpha barrel domain

38:   b.82.1     RmlC-like cupins

39:   b.86.1     Hedgehog/intein (Hint) domain

                    duplication: contains two intertwined structural repeats

40:   b.111.1    Small protein B (SmpB)

41:   b.121.4    Positive stranded ssRNA viruses

42:   b.152.1    Flagellar hook protein flgE

43:   b.169.1    MFPT repeat-like

44:   d.3.1      Cysteine proteinases

                    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

45:   d.22.1     GFP-like

46:   d.38.1     Thioesterase/thiol ester dehydrase-isomerase

47:   d.61.1     LigT-like

48:   d.87.1     FAD/NAD-linked reductases, dimerisation (C-terminal) domain

                    both first two domains are of same beta/beta/alpha fold

49:   d.122.1    ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase

50:   d.131.1    DNA clamp

51:   d.142.2    DNA ligase/mRNA capping enzyme, catalytic domain

                    has a circularly permuted topology

52:   d.161.1    ADC synthase

                    the active site is formed by additional structures inserted into the core structure

53:   d.212.1    TolA/TonB C-terminal domain

54:   d.250.1    Folate-binding domain

                    some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase

55:   d.283.1    Putative modulator of DNA gyrase, PmbA/TldD

56:   e.10.1     Prokaryotic type I DNA topoisomerase

                    duplication: the protein chain passing through the domains 2-4 makes two structural repeats ! The active site is formed by the toprim and "winged helix" domains (domains 1 and 4); these two domains are also found in the type II topoisomerase (DNA gyrase A) and in the alpha subunit of topoisomerase IV

57:   e.17.1     D-aminoacid aminotransferase-like PLP-dependent enzymes

58:   e.35.1     Membrane penetration protein mu1

59:   e.56.1     YaeB-like

60:   e.61.1     ImpE-like

61:   f.10.1     Viral glycoprotein, central and dimerisation domains

62:   f.46.1     HlyD-like secretion proteins

63:   f.47.1     VP4 membrane interaction domain

64:   i.1.1      Ribosome and ribosomal fragments

65:   i.3.1      ATP synthase

66:   i.8.1      RNA polymerase