Results list of ross on fold level
Results list on SCOP fold level
1: c.2 NAD(P)-binding Rossmann-fold domains
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456 ! The nucleotide-binding modes of this and the next two folds/superfamilies are similar
1 superfamily containg query pattern in this fold
2: c.4 Nucleotide-binding domain
3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like
1 superfamily containg query pattern in this fold
3: c.5 MurCD N-terminal domain
3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; incomplete Rossmann-like fold; binds UDP group
1 superfamily containg query pattern in this fold
4: c.19 FabD/lysophospholipase-like
core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 432156; strand 4 is antiparallel to the rest
1 superfamily containg query pattern in this fold
5: c.23 Flavodoxin-like
3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
3 superfamily containg query pattern in this fold
6: c.24 Methylglyoxal synthase-like
3 layers, a/b/a; parallel beta-sheet of 5 strands, order 32145
1 superfamily containg query pattern in this fold
7: c.25 Ferredoxin reductase-like, C-terminal NADP-linked domain
3 layers, a/b/a; parallel beta-sheet of 5 strands, order 32145
1 superfamily containg query pattern in this fold
8: c.26 Adenine nucleotide alpha hydrolase-like
core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
2 superfamily containg query pattern in this fold
9: c.27 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like
1 superfamily containg query pattern in this fold
10: c.28 Cryptochrome/photolyase, N-terminal domain
3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like
1 superfamily containg query pattern in this fold
11: c.30 PreATP-grasp domain
3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands ! possible rudiment form of Rossmann-fold domain
1 superfamily containg query pattern in this fold
12: c.31 DHS-like NAD/FAD-binding domain
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like
1 superfamily containg query pattern in this fold
13: c.32 Tubulin nucleotide-binding domain-like
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
1 superfamily containg query pattern in this fold
14: c.33 Isochorismatase-like hydrolases
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
1 superfamily containg query pattern in this fold
15: c.34 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
1 superfamily containg query pattern in this fold
16: c.37 P-loop containing nucleoside triphosphate hydrolases
3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
1 superfamily containg query pattern in this fold
17: c.40 Methylesterase CheB, C-terminal domain
3 layers: a/b/a, parallel beta-sheet of 7 strands, order 3421567
1 superfamily containg query pattern in this fold
18: c.42 Arginase/deacetylase
3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456
1 superfamily containg query pattern in this fold
19: c.52 Restriction endonuclease-like
core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
1 superfamily containg query pattern in this fold
20: c.65 Formyltransferase
3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214567; strand 6 is antiparallel to the rest
1 superfamily containg query pattern in this fold
21: c.66 S-adenosyl-L-methionine-dependent methyltransferases
core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
1 superfamily containg query pattern in this fold
22: c.70 Nucleoside hydrolase
core: 3 layers, a/b/a ; mixed beta-sheet of 8 strands, order 32145687; strand 7 is antiparallel to the rest
1 superfamily containg query pattern in this fold
23: c.72 Ribokinase-like
core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest ! potential superfamily: members of this fold have similar functions but different ATP-binding sites
2 superfamily containg query pattern in this fold
24: c.73 Carbamate kinase-like
3 layers: a/b/a; mixed (mainly parallel) beta-sheet of 8 strands, order 34215786; strand 8 is antiparallel to the rest
1 superfamily containg query pattern in this fold
25: c.77 Isocitrate/Isopropylmalate dehydrogenase-like
consists of two intertwined (sub)domains related by pseudo dyad; duplication ! 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest
1 superfamily containg query pattern in this fold
26: c.78 ATC-like
consists of two similar domains related by pseudo dyad; duplication ! core: 3 layers, a/b/a, parallel beta-sheet of 4 strands, order 2134
1 superfamily containg query pattern in this fold
27: c.81 Formate dehydrogenase/DMSO reductase, domains 1-3
contains of two similar intertwined domains related by pseudo dyad; duplication ! core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451
1 superfamily containg query pattern in this fold
28: c.82 ALDH-like
consists of two similar domains with 3 layers (a/b/a) each; duplication ! core: parallel beta-sheet of 5 strands, order 32145
1 superfamily containg query pattern in this fold
29: c.83 Aconitase iron-sulfur domain
consists of three similar domains with 3 layers (a/b/a) each; duplication ! core: parallel beta-sheet of 5 strands, order 32145
1 superfamily containg query pattern in this fold
30: c.86 Phosphoglycerate kinase
consists of two non-similar domains, 3 layers (a/b/a) each ! Domain 1 has parallel beta-sheet of 6 strands, order 342156 ! Domain 2 has parallel beta-sheet of 6 strands, order 321456
1 superfamily containg query pattern in this fold
31: c.87 UDP-Glycosyltransferase/glycogen phosphorylase
consists of two non-similar domains with 3 layers (a/b/a) each ! domain 1: parallel beta-sheet of 7 strands, order 3214567 ! domain 2: parallel beta-sheet of 6 strands, order 321456
1 superfamily containg query pattern in this fold
32: c.92 Chelatase-like
duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134
1 superfamily containg query pattern in this fold
33: c.100 Thiamin pyrophosphokinase, catalytic domain
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 432156
1 superfamily containg query pattern in this fold
34: c.104 YjeF N-terminal domain-like
3 layers: a/b/a; mixed (mainly parallel) beta-sheet of 8 strands, order 32145678; strand 8 is antiparallel to the rest
1 superfamily containg query pattern in this fold
35: c.105 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
core:3 layers: a/b/a; mixed beta-sheet of 8 strands, order 45321678, strands 4 and 5 are antiparallel to the rest
1 superfamily containg query pattern in this fold
36: c.108 HAD-like
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
1 superfamily containg query pattern in this fold
37: c.111 Activating enzymes of the ubiquitin-like proteins
3 layers: a/b/a; mixed beta-sheet of 8 strands, order 32145678; strands 6 and 8 are antiparallel to the rest
1 superfamily containg query pattern in this fold
38: c.113 HemD-like
duplication: consists of two similar 'swapped' domain with 3 layers (a/b/a) each; parallel beta-sheet of 5 strands, order 21345
1 superfamily containg query pattern in this fold
39: c.115 Hypothetical protein MTH777 (MT0777)
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
1 superfamily containg query pattern in this fold
40: c.118 GckA/TtuD-like
consists of two non-similar domains ! Domain 1 has parallel sheet of 6 strands, order 321456, Rossmann-like topology ! Domain 2 has mixed sheet of 6 strands, order 126345; strands 5 and 6 are antiparallel to the rest; some similarity to CbiF Domain 2
1 superfamily containg query pattern in this fold
41: c.120 PIN domain-like
3 layers, a/b/a; core: parallel beta-sheet of 5 strands, order 32145
1 superfamily containg query pattern in this fold
42: c.123 CoA-transferase family III (CaiB/BaiF)
consist of two different alpha/beta domains; N-terminal domain has a SurE-like topology with a left-handed beta-alpha-beta unit
1 superfamily containg query pattern in this fold
43: c.124 NagB/RpiA/CoA transferase-like
core: 3 layers: a/b/a; parallel or mixed beta-sheet of 6 strands, order 321456
1 superfamily containg query pattern in this fold
44: c.129 MoCo carrier protein-like
3 layers: a/b/a, parallel beta-sheet of 7 strands, order 4321567
1 superfamily containg query pattern in this fold
45: c.130 Alpha-2,3/8-sialyltransferase CstII
3 layers: a/b/a; parallel beta-sheet of 8 strands, order 54321678
1 superfamily containg query pattern in this fold
46: c.134 LmbE-like
3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest; topological similarity to SAM-dependent methyltransferases
1 superfamily containg query pattern in this fold
47: c.143 CofD-like
3 layers: a/b/a, parallel beta-sheet of 7 strands, order 3214567; topological similarity to the CobT-like fold (scop_cf 52732)
1 superfamily containg query pattern in this fold
48: e.26 Prismane protein-like
3 domains: (1) spectrin repeat-like 3-helical bundle; (2 and 3) alpha/beta: Rossmann-fold topology
1 superfamily containg query pattern in this fold
49: e.50 AF1104-like
2 domains; d1: [all-alpha; 3-helical bundle, similar to the immunoglobulin/albumin-binding domain-like fold (scop_cf 46996)]; d2: [alpha/beta; 3 layers, a/b/a; 6-stranded mixed beta-sheet, order: 321456, strand 6 is antiparallel to the rest]
1 superfamily containg query pattern in this fold
50: e.51 Urocanase
3 domains; d1: alpha+beta [alpha(2)-beta(3); mixed sheet: 213]; d2: alpha/beta of the NAD(P)-binding Rossmann-fold superfamily (scop_sf 51735, most similar to scop_fa 51883 and scop_fa 51736); d3: alpha+beta of the glutamine synthetase/guanido kinase fold (scop_cf 55930); d1 and d3 form a single beta-sheet
1 superfamily containg query pattern in this fold
51: i.10 Microtubule complexes
1 superfamily containg query pattern in this fold
52: i.12 Proteins of incorrect, partial and unknown sequence
1 superfamily containg query pattern in this fold
53: i.18 Membrane ion ATPase
1 superfamily containg query pattern in this fold
54: i.26 Fatty acid synthase
1 superfamily containg query pattern in this fold