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set ribbon_radius = 0.5 set orthoscopic = 1 bg_color white set opaque_background, off set cartoon_fancy_sheets, 1 set cartoon_fancy_helices, 1 set cartoon_smooth_loops,1 set cartoon_rect_length, 1.2 set cartoon_rect_width, 0.3 set cartoon_dumbbell_length, 1.2 set cartoon_dumbbell_radius, 0.1 set cartoon_dumbbell_width, 0.1 cmd.read_pdbstr("""\ HEADER RIBOSOME 16-APR-09 3IY8 \ TITLE LEISHMANIA TARENTOLAE MITONCHONDRIAL RIBOSOME SMALL SUBUNIT \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: LEISHMANIA TARENTOLAE MITOCHONDRIAL SMALL SUBUNIT; \ COMPND 3 CHAIN: A; \ COMPND 4 MOL_ID: 2; \ COMPND 5 MOLECULE: 30S RIBOSOMAL PROTEIN S5; \ COMPND 6 CHAIN: E; \ COMPND 7 MOL_ID: 3; \ COMPND 8 MOLECULE: 30S RIBOSOMAL PROTEIN S6; \ COMPND 9 CHAIN: F; \ COMPND 10 MOL_ID: 4; \ COMPND 11 MOLECULE: 30S RIBOSOMAL PROTEIN S8; \ COMPND 12 CHAIN: H; \ COMPND 13 MOL_ID: 5; \ COMPND 14 MOLECULE: 30S RIBOSOMAL PROTEIN S9; \ COMPND 15 CHAIN: I; \ COMPND 16 MOL_ID: 6; \ COMPND 17 MOLECULE: 30S RIBOSOMAL PROTEIN S11; \ COMPND 18 CHAIN: K; \ COMPND 19 MOL_ID: 7; \ COMPND 20 MOLECULE: 30S RIBOSOMAL PROTEIN S12; \ COMPND 21 CHAIN: L; \ COMPND 22 MOL_ID: 8; \ COMPND 23 MOLECULE: 30S RIBOSOMAL PROTEIN S15; \ COMPND 24 CHAIN: O; \ COMPND 25 MOL_ID: 9; \ COMPND 26 MOLECULE: 30S RIBOSOMAL PROTEIN S16; \ COMPND 27 CHAIN: P; \ COMPND 28 MOL_ID: 10; \ COMPND 29 MOLECULE: 30S RIBOSOMAL PROTEIN S17; \ COMPND 30 CHAIN: Q; \ COMPND 31 MOL_ID: 11; \ COMPND 32 MOLECULE: 30S RIBOSOMAL PROTEIN S18; \ COMPND 33 CHAIN: R \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA TARENTOLAE; \ SOURCE 3 ORGANISM_TAXID: 5689; \ SOURCE 4 MOL_ID: 2; \ SOURCE 5 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 6 ORGANISM_TAXID: 83333; \ SOURCE 7 MOL_ID: 3; \ SOURCE 8 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 9 ORGANISM_TAXID: 83333; \ SOURCE 10 MOL_ID: 4; \ SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 12 ORGANISM_TAXID: 83333; \ SOURCE 13 MOL_ID: 5; \ SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 15 ORGANISM_TAXID: 83333; \ SOURCE 16 MOL_ID: 6; \ SOURCE 17 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 18 ORGANISM_TAXID: 83333; \ SOURCE 19 MOL_ID: 7; \ SOURCE 20 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 21 ORGANISM_TAXID: 83333; \ SOURCE 22 MOL_ID: 8; \ SOURCE 23 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 24 ORGANISM_TAXID: 83333; \ SOURCE 25 MOL_ID: 9; \ SOURCE 26 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 27 ORGANISM_TAXID: 83333; \ SOURCE 28 MOL_ID: 10; \ SOURCE 29 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 30 ORGANISM_TAXID: 83333; \ SOURCE 31 MOL_ID: 11; \ SOURCE 32 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 33 ORGANISM_TAXID: 83333 \ KEYWDS LEISHMANIA TARENTOLAE, MITOCHONDRIAL RIBOSOME, CRYOEM, MINIMAL RNA., \ KEYWDS 2 ANTIBIOTIC RESISTANCE, RIBONUCLEOPROTEIN, RIBOSOMAL PROTEIN, RNA- \ KEYWDS 3 BINDING, RRNA-BINDING, REPRESSOR, TRANSLATION REGULATION, TRNA- \ KEYWDS 4 BINDING, METHYLATION, ENDONUCLEASE, HYDROLASE, NUCLEASE, RIBOSOME \ EXPDTA ELECTRON MICROSCOPY \ MDLTYP CA ATOMS ONLY, CHAIN E, F, H, I, K, L, O, P, Q, R; P ATOMS ONLY, CHAIN\ MDLTYP 2A \ AUTHOR M.R.SHARMA,T.M.BOOTH,L.SIMPSON,D.A.MASLOV,R.K.AGRAWAL \ REVDAT 3 21-FEB-24 3IY8 1 REMARK \ REVDAT 2 18-JUL-18 3IY8 1 REMARK \ REVDAT 1 07-JUL-09 3IY8 0 \ JRNL AUTH M.R.SHARMA,T.M.BOOTH,L.SIMPSON,D.A.MASLOV,R.K.AGRAWAL \ JRNL TITL STRUCTURE OF A MITOCHONDRIAL RIBOSOME WITH MINIMAL RNA \ JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 9637 2009 \ JRNL REFN ISSN 0027-8424 \ JRNL PMID 19497863 \ JRNL DOI 10.1073/PNAS.0901631106 \ REMARK 2 \ REMARK 2 RESOLUTION. 14.10 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 SOFTWARE PACKAGES : SPIDER \ REMARK 3 RECONSTRUCTION SCHEMA : NULL \ REMARK 3 \ REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT \ REMARK 3 PDB ENTRY : NULL \ REMARK 3 REFINEMENT SPACE : REAL \ REMARK 3 REFINEMENT PROTOCOL : NULL \ REMARK 3 REFINEMENT TARGET : NULL \ REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL \ REMARK 3 \ REMARK 3 FITTING PROCEDURE : NULL \ REMARK 3 \ REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS \ REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL \ REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL \ REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 14.10 \ REMARK 3 NUMBER OF PARTICLES : 53475 \ REMARK 3 CTF CORRECTION METHOD : NULL \ REMARK 3 \ REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL \ REMARK 3 \ REMARK 3 OTHER DETAILS: NULL \ REMARK 4 \ REMARK 4 3IY8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-09. \ REMARK 100 THE DEPOSITION ID IS D_1000160014. \ REMARK 245 \ REMARK 245 EXPERIMENTAL DETAILS \ REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE \ REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) \ REMARK 245 \ REMARK 245 ELECTRON MICROSCOPE SAMPLE \ REMARK 245 SAMPLE TYPE : PARTICLE \ REMARK 245 PARTICLE TYPE : POINT \ REMARK 245 NAME OF SAMPLE : LEISHMANIA MITOCHONDRIAL 50S \ REMARK 245 RIBOSOME \ REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.07 \ REMARK 245 SAMPLE SUPPORT DETAILS : NULL \ REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL \ REMARK 245 SAMPLE BUFFER : NULL \ REMARK 245 PH : 7.50 \ REMARK 245 SAMPLE DETAILS : MONOMER \ REMARK 245 \ REMARK 245 DATA ACQUISITION \ REMARK 245 DATE OF EXPERIMENT : NULL \ REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL \ REMARK 245 TEMPERATURE (KELVIN) : 80.00 \ REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 \ REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM \ REMARK 245 MINIMUM DEFOCUS (NM) : 1600.00 \ REMARK 245 MAXIMUM DEFOCUS (NM) : 4500.00 \ REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 \ REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 \ REMARK 245 NOMINAL CS : NULL \ REMARK 245 IMAGING MODE : BRIGHT FIELD \ REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : NULL \ REMARK 245 ILLUMINATION MODE : FLOOD BEAM \ REMARK 245 NOMINAL MAGNIFICATION : 50000 \ REMARK 245 CALIBRATED MAGNIFICATION : 50760 \ REMARK 245 SOURCE : FIELD EMISSION GUN \ REMARK 245 ACCELERATION VOLTAGE (KV) : 200 \ REMARK 245 IMAGING DETAILS : NULL \ REMARK 247 \ REMARK 247 ELECTRON MICROSCOPY \ REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON \ REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE \ REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES \ REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION \ REMARK 247 OF THE STRUCTURE FACTORS. \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: UNDECAMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F, H, I, K, L, O, P, Q, \ REMARK 350 AND CHAINS: R \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 500 \ REMARK 500 GEOMETRY AND STEREOCHEMISTRY \ REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT \ REMARK 500 \ REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. \ REMARK 500 \ REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE \ REMARK 500 P U A 445 CA ALA H 34 0.45 \ REMARK 500 P U A 400 CA ARG R 44 0.58 \ REMARK 500 P C A 258 CA ARG L 109 0.64 \ REMARK 500 CA GLU H 123 CA LYS Q 33 0.94 \ REMARK 500 P U A 384 CA ILE F 51 0.96 \ REMARK 500 CA ILE H 125 CA TYR Q 31 1.23 \ REMARK 500 P G A 474 CA PRO K 105 1.37 \ REMARK 500 P C A 366 CA GLY H 16 1.42 \ REMARK 500 P U A 112 CA GLU Q 60 1.50 \ REMARK 500 P A A 432 CA VAL O 26 1.53 \ REMARK 500 CA ILE H 124 CA GLY Q 32 1.54 \ REMARK 500 CA TYR H 85 CA PHE Q 34 1.60 \ REMARK 500 P U A 388 CA GLU K 71 1.82 \ REMARK 500 P C A 620 CA THR K 18 1.97 \ REMARK 500 P A A 15 CA ASN E 123 2.00 \ REMARK 500 P A A 361 CA THR H 11 2.06 \ REMARK 500 P C A 622 CA ARG K 81 2.10 \ REMARK 500 P G A 242 CA GLY L 67 2.11 \ REMARK 500 P U A 389 CA THR K 99 2.12 \ REMARK 500 \ REMARK 500 REMARK: NULL \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: EMD-5113 RELATED DB: EMDB \ REMARK 900 LEISHMANIA TARENTOLAE MITOCHONDRIAL RIBOSOME \ DBREF 3IY8 E 1 150 UNP P0A7W1 RS5_ECOLI 10 159 \ DBREF 3IY8 F 1 100 UNP P02358 RS6_ECOLI 1 100 \ DBREF 3IY8 H 1 129 UNP P0A7W7 RS8_ECOLI 2 130 \ DBREF 3IY8 I 1 127 UNP P0A7X3 RS9_ECOLI 4 130 \ DBREF 3IY8 K 1 117 UNP P0A7R9 RS11_ECOLI 13 129 \ DBREF 3IY8 L 1 123 UNP P0A7S3 RS12_ECOLI 2 124 \ DBREF 3IY8 O 1 88 UNP Q8X9M2 RS15_ECO57 2 89 \ DBREF 3IY8 P 1 82 UNP P0A7T3 RS16_ECOLI 1 82 \ DBREF 3IY8 Q 1 80 UNP P0AG63 RS17_ECOLI 4 83 \ DBREF 3IY8 R 1 55 UNP Q1R358 RS18_ECOUT 20 74 \ DBREF 3IY8 A 1 627 PDB 3IY8 3IY8 1 627 \ SEQRES 1 A 540 A U U A U A C G U A G U C \ SEQRES 2 A 540 A A U U G U U A U U A U U \ SEQRES 3 A 540 C A U A U U A A U U U U U \ SEQRES 4 A 540 U U A A A A G U U U U U U \ SEQRES 5 A 540 A A U U U U A U A U U A G \ SEQRES 6 A 540 U U U A U U U G U U U A C \ SEQRES 7 A 540 A A A U U U A A A U U A U \ SEQRES 8 A 540 A U U U C A U U A U U U A \ SEQRES 9 A 540 G G A A U A G U U A A U U \ SEQRES 10 A 540 A G A U U U A U U U G U U \ SEQRES 11 A 540 A A U G C U A U U A A A G \ SEQRES 12 A 540 G G G U G U G G A A A A A \ SEQRES 13 A 540 G U G U U A A A U U A U U \ SEQRES 14 A 540 U A U A U A U U U A A A U \ SEQRES 15 A 540 A A U A A A U A A A A U A \ SEQRES 16 A 540 U A A C U U A U U A G U C \ SEQRES 17 A 540 A G A A A U G G A U G C G \ SEQRES 18 A 540 A G C C G U U G C G G U A \ SEQRES 19 A 540 A U U U C U A U G C U U U \ SEQRES 20 A 540 U A A A U A U U A U A C A \ SEQRES 21 A 540 U U U A U U U U A U U A U \ SEQRES 22 A 540 A U A U G C A A A U A A A \ SEQRES 23 A 540 A A A U G A C A C A U U A \ SEQRES 24 A 540 A U U A U U A A U U A U A \ SEQRES 25 A 540 U U A U A U U A U A U U U \ SEQRES 26 A 540 A U U C A C A U A A G U C \ SEQRES 27 A 540 A A C A A U A U C U A U U \ SEQRES 28 A 540 U A C U G U U U U U G A C \ SEQRES 29 A 540 A A C A U G A U A A G G A \ SEQRES 30 A 540 U U A U A A A U G G A A U \ SEQRES 31 A 540 U A U A A U U U U A U A A \ SEQRES 32 A 540 U C A A A A C U A A U U U \ SEQRES 33 A 540 A U U A U A U U A A A U U \ SEQRES 34 A 540 A G C A U G U U U A G A U \ SEQRES 35 A 540 A A A A C A A U A A A U U \ SEQRES 36 A 540 U A G A A G G U A U U C U \ SEQRES 37 A 540 U G C C C A C C A U U C U \ SEQRES 38 A 540 U U G U A A U A A A G A C \ SEQRES 39 A 540 A A C G U G C A G U A A U \ SEQRES 40 A 540 U A A U A U A U U U A U A \ SEQRES 41 A 540 A A A A U A U A U U U U C \ SEQRES 42 A 540 U C A U G U U \ SEQRES 1 E 150 GLU LEU GLN GLU LYS LEU ILE ALA VAL ASN ARG VAL SER \ SEQRES 2 E 150 LYS THR VAL LYS GLY GLY ARG ILE PHE SER PHE THR ALA \ SEQRES 3 E 150 LEU THR VAL VAL GLY ASP GLY ASN GLY ARG VAL GLY PHE \ SEQRES 4 E 150 GLY TYR GLY LYS ALA ARG GLU VAL PRO ALA ALA ILE GLN \ SEQRES 5 E 150 LYS ALA MET GLU LYS ALA ARG ARG ASN MET ILE ASN VAL \ SEQRES 6 E 150 ALA LEU ASN ASN GLY THR LEU GLN HIS PRO VAL LYS GLY \ SEQRES 7 E 150 VAL HIS THR GLY SER ARG VAL PHE MET GLN PRO ALA SER \ SEQRES 8 E 150 GLU GLY THR GLY ILE ILE ALA GLY GLY ALA MET ARG ALA \ SEQRES 9 E 150 VAL LEU GLU VAL ALA GLY VAL HIS ASN VAL LEU ALA LYS \ SEQRES 10 E 150 ALA TYR GLY SER THR ASN PRO ILE ASN VAL VAL ARG ALA \ SEQRES 11 E 150 THR ILE ASP GLY LEU GLU ASN MET ASN SER PRO GLU MET \ SEQRES 12 E 150 VAL ALA ALA LYS ARG GLY LYS \ SEQRES 1 F 100 MET ARG HIS TYR GLU ILE VAL PHE MET VAL HIS PRO ASP \ SEQRES 2 F 100 GLN SER GLU GLN VAL PRO GLY MET ILE GLU ARG TYR THR \ SEQRES 3 F 100 ALA ALA ILE THR GLY ALA GLU GLY LYS ILE HIS ARG LEU \ SEQRES 4 F 100 GLU ASP TRP GLY ARG ARG GLN LEU ALA TYR PRO ILE ASN \ SEQRES 5 F 100 LYS LEU HIS LYS ALA HIS TYR VAL LEU MET ASN VAL GLU \ SEQRES 6 F 100 ALA PRO GLN GLU VAL ILE ASP GLU LEU GLU THR THR PHE \ SEQRES 7 F 100 ARG PHE ASN ASP ALA VAL ILE ARG SER MET VAL MET ARG \ SEQRES 8 F 100 THR LYS HIS ALA VAL THR GLU ALA SER \ SEQRES 1 H 129 SER MET GLN ASP PRO ILE ALA ASP MET LEU THR ARG ILE \ SEQRES 2 H 129 ARG ASN GLY GLN ALA ALA ASN LYS ALA ALA VAL THR MET \ SEQRES 3 H 129 PRO SER SER LYS LEU LYS VAL ALA ILE ALA ASN VAL LEU \ SEQRES 4 H 129 LYS GLU GLU GLY PHE ILE GLU ASP PHE LYS VAL GLU GLY \ SEQRES 5 H 129 ASP THR LYS PRO GLU LEU GLU LEU THR LEU LYS TYR PHE \ SEQRES 6 H 129 GLN GLY LYS ALA VAL VAL GLU SER ILE GLN ARG VAL SER \ SEQRES 7 H 129 ARG PRO GLY LEU ARG ILE TYR LYS ARG LYS ASP GLU LEU \ SEQRES 8 H 129 PRO LYS VAL MET ALA GLY LEU GLY ILE ALA VAL VAL SER \ SEQRES 9 H 129 THR SER LYS GLY VAL MET THR ASP ARG ALA ALA ARG GLN \ SEQRES 10 H 129 ALA GLY LEU GLY GLY GLU ILE ILE CYS TYR VAL ALA \ SEQRES 1 I 127 ASN GLN TYR TYR GLY THR GLY ARG ARG LYS SER SER ALA \ SEQRES 2 I 127 ALA ARG VAL PHE ILE LYS PRO GLY ASN GLY LYS ILE VAL \ SEQRES 3 I 127 ILE ASN GLN ARG SER LEU GLU GLN TYR PHE GLY ARG GLU \ SEQRES 4 I 127 THR ALA ARG MET VAL VAL ARG GLN PRO LEU GLU LEU VAL \ SEQRES 5 I 127 ASP MET VAL GLU LYS LEU ASP LEU TYR ILE THR VAL LYS \ SEQRES 6 I 127 GLY GLY GLY ILE SER GLY GLN ALA GLY ALA ILE ARG HIS \ SEQRES 7 I 127 GLY ILE THR ARG ALA LEU MET GLU TYR ASP GLU SER LEU \ SEQRES 8 I 127 ARG SER GLU LEU ARG LYS ALA GLY PHE VAL THR ARG ASP \ SEQRES 9 I 127 ALA ARG GLN VAL GLU ARG LYS LYS VAL GLY LEU ARG LYS \ SEQRES 10 I 127 ALA ARG ARG ARG PRO GLN PHE SER LYS ARG \ SEQRES 1 K 117 ARG LYS GLN VAL SER ASP GLY VAL ALA HIS ILE HIS ALA \ SEQRES 2 K 117 SER PHE ASN ASN THR ILE VAL THR ILE THR ASP ARG GLN \ SEQRES 3 K 117 GLY ASN ALA LEU GLY TRP ALA THR ALA GLY GLY SER GLY \ SEQRES 4 K 117 PHE ARG GLY SER ARG LYS SER THR PRO PHE ALA ALA GLN \ SEQRES 5 K 117 VAL ALA ALA GLU ARG CYS ALA ASP ALA VAL LYS GLU TYR \ SEQRES 6 K 117 GLY ILE LYS ASN LEU GLU VAL MET VAL LYS GLY PRO GLY \ SEQRES 7 K 117 PRO GLY ARG GLU SER THR ILE ARG ALA LEU ASN ALA ALA \ SEQRES 8 K 117 GLY PHE ARG ILE THR ASN ILE THR ASP VAL THR PRO ILE \ SEQRES 9 K 117 PRO HIS ASN GLY CYS ARG PRO PRO LYS LYS ARG ARG VAL \ SEQRES 1 L 123 ALA THR VAL ASN GLN LEU VAL ARG LYS PRO ARG ALA ARG \ SEQRES 2 L 123 LYS VAL ALA LYS SER ASN VAL PRO ALA LEU GLU ALA CYS \ SEQRES 3 L 123 PRO GLN LYS ARG GLY VAL CYS THR ARG VAL TYR THR THR \ SEQRES 4 L 123 THR PRO LYS LYS PRO ASN SER ALA LEU ARG LYS VAL CYS \ SEQRES 5 L 123 ARG VAL ARG LEU THR ASN GLY PHE GLU VAL THR SER TYR \ SEQRES 6 L 123 ILE GLY GLY GLU GLY HIS ASN LEU GLN GLU HIS SER VAL \ SEQRES 7 L 123 ILE LEU ILE ARG GLY GLY ARG VAL LYS ASP LEU PRO GLY \ SEQRES 8 L 123 VAL ARG TYR HIS THR VAL ARG GLY ALA LEU ASP CYS SER \ SEQRES 9 L 123 GLY VAL LYS ASP ARG LYS GLN ALA ARG SER LYS TYR GLY \ SEQRES 10 L 123 VAL LYS ARG PRO LYS ALA \ SEQRES 1 O 88 SER LEU SER THR GLU ALA THR ALA LYS ILE VAL SER GLU \ SEQRES 2 O 88 PHE GLY ARG ASP ALA ASN ASP THR GLY SER THR GLU VAL \ SEQRES 3 O 88 GLN VAL ALA LEU LEU THR ALA GLN ILE ASN HIS LEU GLN \ SEQRES 4 O 88 GLY HIS PHE ALA GLU HIS LYS LYS ASP HIS HIS SER ARG \ SEQRES 5 O 88 ARG GLY LEU LEU ARG MET VAL SER GLN ARG ARG LYS LEU \ SEQRES 6 O 88 LEU ASP TYR LEU LYS ARG LYS ASP VAL ALA ARG TYR THR \ SEQRES 7 O 88 ARG LEU ILE GLU ARG LEU GLY LEU ARG ARG \ SEQRES 1 P 82 MET VAL THR ILE ARG LEU ALA ARG HIS GLY ALA LYS LYS \ SEQRES 2 P 82 ARG PRO PHE TYR GLN VAL VAL VAL ALA ASP SER ARG ASN \ SEQRES 3 P 82 ALA ARG ASN GLY ARG PHE ILE GLU ARG VAL GLY PHE PHE \ SEQRES 4 P 82 ASN PRO ILE ALA SER GLU LYS GLU GLU GLY THR ARG LEU \ SEQRES 5 P 82 ASP LEU ASP ARG ILE ALA HIS TRP VAL GLY GLN GLY ALA \ SEQRES 6 P 82 THR ILE SER ASP ARG VAL ALA ALA LEU ILE LYS GLU VAL \ SEQRES 7 P 82 ASN LYS ALA ALA \ SEQRES 1 Q 80 LYS ILE ARG THR LEU GLN GLY ARG VAL VAL SER ASP LYS \ SEQRES 2 Q 80 MET GLU LYS SER ILE VAL VAL ALA ILE GLU ARG PHE VAL \ SEQRES 3 Q 80 LYS HIS PRO ILE TYR GLY LYS PHE ILE LYS ARG THR THR \ SEQRES 4 Q 80 LYS LEU HIS VAL HIS ASP GLU ASN ASN GLU CYS GLY ILE \ SEQRES 5 Q 80 GLY ASP VAL VAL GLU ILE ARG GLU CYS ARG PRO LEU SER \ SEQRES 6 Q 80 LYS THR LYS SER TRP THR LEU VAL ARG VAL VAL GLU LYS \ SEQRES 7 Q 80 ALA VAL \ SEQRES 1 R 55 GLU ILE ASP TYR LYS ASP ILE ALA THR LEU LYS ASN TYR \ SEQRES 2 R 55 ILE THR GLU SER GLY LYS ILE VAL PRO SER ARG ILE THR \ SEQRES 3 R 55 GLY THR ARG ALA LYS TYR GLN ARG GLN LEU ALA ARG ALA \ SEQRES 4 R 55 ILE LYS ARG ALA ARG TYR LEU SER LEU LEU PRO TYR THR \ SEQRES 5 R 55 ASP ARG HIS \ CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 1.000000 0.000000 0.000000 0.00000 \ SCALE2 0.000000 1.000000 0.000000 0.00000 \ SCALE3 0.000000 0.000000 1.000000 0.00000 \ TER 541 U A 627 \ ATOM 542 CA GLU E 1 -73.375 70.760 24.187 1.00 1.30 C \ ATOM 543 CA LEU E 2 -70.649 68.150 24.699 1.00 86.57 C \ ATOM 544 CA GLN E 3 -68.855 66.938 21.571 1.00 52.60 C \ ATOM 545 CA GLU E 4 -67.473 63.401 21.809 1.00 63.95 C \ ATOM 546 CA LYS E 5 -64.831 62.117 19.393 1.00 62.31 C \ ATOM 547 CA LEU E 6 -63.701 58.518 18.853 1.00 37.22 C \ ATOM 548 CA ILE E 7 -59.900 58.535 18.696 1.00 46.45 C \ ATOM 549 CA ALA E 8 -59.383 54.854 17.882 1.00 37.58 C \ ATOM 550 CA VAL E 9 -60.132 51.326 19.091 1.00 33.91 C \ ATOM 551 CA ASN E 10 -57.831 48.309 19.337 1.00 42.76 C \ ATOM 552 CA ARG E 11 -58.766 44.685 20.022 1.00 66.44 C \ ATOM 553 CA VAL E 12 -56.275 43.303 22.558 1.00 27.03 C \ ATOM 554 CA SER E 13 -56.312 39.659 23.679 1.00 79.32 C \ ATOM 555 CA LYS E 14 -55.796 37.338 26.656 1.00 34.49 C \ ATOM 556 CA THR E 15 -54.695 33.691 26.570 1.00 42.97 C \ ATOM 557 CA VAL E 16 -56.175 31.326 29.159 1.00 21.84 C \ ATOM 558 CA LYS E 17 -56.852 27.658 29.965 1.00 66.39 C \ ATOM 559 CA GLY E 18 -59.545 27.005 27.375 1.00 67.80 C \ ATOM 560 CA GLY E 19 -58.036 29.126 24.631 1.00 56.93 C \ ATOM 561 CA ARG E 20 -57.748 32.877 24.139 1.00 65.17 C \ ATOM 562 CA ILE E 21 -60.288 35.678 24.585 1.00 15.76 C \ ATOM 563 CA PHE E 22 -60.418 39.194 23.139 1.00 35.52 C \ ATOM 564 CA SER E 23 -61.722 42.576 24.320 1.00 79.88 C \ ATOM 565 CA PHE E 24 -61.665 45.738 22.188 1.00 41.29 C \ ATOM 566 CA THR E 25 -60.755 48.956 24.020 1.00 41.16 C \ ATOM 567 CA ALA E 26 -61.193 52.344 22.289 1.00 31.19 C \ ATOM 568 CA LEU E 27 -60.281 55.860 23.424 1.00 69.33 C \ ATOM 569 CA THR E 28 -62.591 58.884 23.271 1.00 55.92 C \ ATOM 570 CA VAL E 29 -62.151 62.612 23.874 1.00 34.61 C \ ATOM 571 CA VAL E 30 -65.047 64.923 24.738 1.00 50.80 C \ ATOM 572 CA GLY E 31 -65.477 68.651 25.240 1.00 69.04 C \ ATOM 573 CA ASP E 32 -67.012 71.918 24.076 1.00 27.35 C \ ATOM 574 CA GLY E 33 -65.692 74.694 21.858 1.00 6.21 C \ ATOM 575 CA ASN E 34 -65.243 76.728 25.030 1.00 61.18 C \ ATOM 576 CA GLY E 35 -62.356 75.279 27.014 1.00 70.69 C \ ATOM 577 CA ARG E 36 -63.193 71.935 28.615 1.00 55.60 C \ ATOM 578 CA VAL E 37 -62.121 68.393 27.718 1.00 37.48 C \ ATOM 579 CA GLY E 38 -61.279 64.956 29.079 1.00 53.80 C \ ATOM 580 CA PHE E 39 -60.618 61.657 27.320 1.00 40.03 C \ ATOM 581 CA GLY E 40 -62.111 58.289 28.200 1.00 63.02 C \ ATOM 582 CA TYR E 41 -60.943 54.684 27.962 1.00 54.07 C \ ATOM 583 CA GLY E 42 -63.140 51.627 28.422 1.00 26.10 C \ ATOM 584 CA LYS E 43 -63.020 47.962 27.432 1.00 53.99 C \ ATOM 585 CA ALA E 44 -65.721 45.437 26.505 1.00 38.15 C \ ATOM 586 CA ARG E 45 -66.358 42.170 24.663 1.00 81.20 C \ ATOM 587 CA GLU E 46 -68.211 44.219 22.050 1.00 68.40 C \ ATOM 588 CA VAL E 47 -66.970 46.967 19.735 1.00 41.02 C \ ATOM 589 CA PRO E 48 -69.897 49.261 20.696 1.00 9.57 C \ ATOM 590 CA ALA E 49 -70.070 48.255 24.363 1.00 53.19 C \ ATOM 591 CA ALA E 50 -66.484 49.451 24.772 1.00 16.20 C \ ATOM 592 CA ILE E 51 -66.940 52.973 23.398 1.00 35.18 C \ ATOM 593 CA GLN E 52 -69.996 53.145 25.670 1.00 66.51 C \ ATOM 594 CA LYS E 53 -67.869 53.000 28.819 1.00 48.01 C \ ATOM 595 CA ALA E 54 -65.090 55.274 27.560 1.00 77.54 C \ ATOM 596 CA MET E 55 -67.653 57.952 26.717 1.00 89.67 C \ ATOM 597 CA GLU E 56 -69.285 57.870 30.159 1.00 75.53 C \ ATOM 598 CA LYS E 57 -65.857 57.909 31.806 1.00 89.08 C \ ATOM 599 CA ALA E 58 -65.029 60.730 29.392 1.00 45.51 C \ ATOM 600 CA ARG E 59 -67.837 63.124 30.318 1.00 91.69 C \ ATOM 601 CA ARG E 60 -66.637 62.848 33.915 1.00 94.86 C \ ATOM 602 CA ASN E 61 -63.098 63.687 35.044 1.00 87.54 C \ ATOM 603 CA MET E 62 -62.844 66.548 32.552 1.00 69.42 C \ ATOM 604 CA ILE E 63 -60.653 69.657 32.582 1.00 70.84 C \ ATOM 605 CA ASN E 64 -60.810 73.404 31.944 1.00 82.59 C \ ATOM 606 CA VAL E 65 -58.215 75.044 29.689 1.00 44.00 C \ ATOM 607 CA ALA E 66 -57.308 78.734 29.883 1.00 98.63 C \ ATOM 608 CA LEU E 67 -58.099 79.286 26.201 1.00 4.16 C \ ATOM 609 CA ASN E 68 -58.148 82.805 24.771 1.00 6.20 C \ ATOM 610 CA ASN E 69 -59.345 83.718 21.281 1.00 77.08 C \ ATOM 611 CA GLY E 70 -60.014 80.172 20.124 1.00 65.44 C \ ATOM 612 CA THR E 71 -56.378 79.303 20.781 1.00 42.23 C \ ATOM 613 CA LEU E 72 -53.707 78.967 23.472 1.00 37.67 C \ ATOM 614 CA GLN E 73 -52.302 81.892 25.460 1.00 98.55 C \ ATOM 615 CA HIS E 74 -48.731 80.753 24.795 1.00 56.06 C \ ATOM 616 CA PRO E 75 -46.817 77.760 23.356 1.00 70.00 C \ ATOM 617 CA VAL E 76 -47.228 75.327 26.250 1.00 44.73 C \ ATOM 618 CA LYS E 77 -45.374 72.008 26.412 1.00 91.86 C \ ATOM 619 CA GLY E 78 -46.422 68.705 27.950 1.00 28.36 C \ ATOM 620 CA VAL E 79 -45.270 65.086 28.059 1.00 96.09 C \ ATOM 621 CA HIS E 80 -46.412 61.732 29.452 1.00 34.67 C \ ATOM 622 CA THR E 81 -44.978 58.208 29.281 1.00 90.08 C \ ATOM 623 CA GLY E 82 -42.974 58.102 26.064 1.00 41.75 C \ ATOM 624 CA SER E 83 -44.942 60.873 24.374 1.00 22.99 C \ ATOM 625 CA ARG E 84 -43.337 64.305 23.939 1.00 66.00 C \ ATOM 626 CA VAL E 85 -45.843 66.890 22.699 1.00 56.74 C \ ATOM 627 CA PHE E 86 -45.282 70.599 22.044 1.00 48.27 C \ ATOM 628 CA MET E 87 -48.174 72.911 21.172 1.00 33.53 C \ ATOM 629 CA GLN E 88 -47.959 76.498 19.922 1.00 66.69 C \ ATOM 630 CA PRO E 89 -50.689 79.140 19.377 1.00 35.24 C \ ATOM 631 CA ALA E 90 -51.145 80.800 15.984 1.00 48.36 C \ ATOM 632 CA SER E 91 -53.095 83.833 14.770 1.00 76.23 C \ ATOM 633 CA GLU E 92 -56.513 83.350 13.177 1.00 6.01 C \ ATOM 634 CA GLY E 93 -56.342 81.665 9.788 1.00 45.81 C \ ATOM 635 CA THR E 94 -54.357 78.538 10.596 1.00 40.63 C \ ATOM 636 CA GLY E 95 -56.543 75.508 11.210 1.00 62.92 C \ ATOM 637 CA ILE E 96 -55.818 72.863 13.826 1.00 67.14 C \ ATOM 638 CA ILE E 97 -52.353 71.574 12.943 1.00 75.64 C \ ATOM 639 CA ALA E 98 -52.006 68.218 14.706 1.00 32.08 C \ ATOM 640 CA GLY E 99 -51.695 64.521 13.916 1.00 88.70 C \ ATOM 641 CA GLY E 100 -54.187 62.138 15.474 1.00 89.26 C \ ATOM 642 CA ALA E 101 -55.014 62.316 19.182 1.00 58.60 C \ ATOM 643 CA MET E 102 -53.864 65.927 19.563 1.00 75.70 C \ ATOM 644 CA ARG E 103 -55.864 67.014 16.511 1.00 37.86 C \ ATOM 645 CA ALA E 104 -58.922 65.512 18.195 1.00 30.24 C \ ATOM 646 CA VAL E 105 -58.477 66.559 21.829 1.00 38.86 C \ ATOM 647 CA LEU E 106 -58.238 70.119 20.506 1.00 62.33 C \ ATOM 648 CA GLU E 107 -61.141 69.961 18.043 1.00 73.03 C \ ATOM 649 CA VAL E 108 -63.347 69.734 21.133 1.00 9.34 C \ ATOM 650 CA ALA E 109 -61.549 71.880 23.707 1.00 17.21 C \ ATOM 651 CA GLY E 110 -62.312 75.006 21.713 1.00 56.18 C \ ATOM 652 CA VAL E 111 -59.044 75.242 19.803 1.00 29.59 C \ ATOM 653 CA HIS E 112 -59.117 76.763 16.318 1.00 62.32 C \ ATOM 654 CA ASN E 113 -55.523 77.725 15.522 1.00 68.16 C \ ATOM 655 CA VAL E 114 -52.519 75.639 16.586 1.00 34.30 C \ ATOM 656 CA LEU E 115 -49.573 73.572 15.354 1.00 27.43 C \ ATOM 657 CA ALA E 116 -48.308 70.718 17.532 1.00 65.88 C \ ATOM 658 CA LYS E 117 -46.177 67.609 16.973 1.00 34.67 C \ ATOM 659 CA ALA E 118 -45.757 64.211 18.642 1.00 41.79 C \ ATOM 660 CA TYR E 119 -42.062 63.580 19.302 1.00 34.14 C \ ATOM 661 CA GLY E 120 -41.955 60.569 21.601 1.00 99.65 C \ ATOM 662 CA SER E 121 -44.162 57.530 21.051 1.00 37.72 C \ ATOM 663 CA THR E 122 -47.075 57.967 18.653 1.00 61.56 C \ ATOM 664 CA ASN E 123 -49.207 55.900 21.030 1.00 69.41 C \ ATOM 665 CA PRO E 124 -52.707 57.446 20.997 1.00 16.58 C \ ATOM 666 CA ILE E 125 -53.403 56.350 24.576 1.00 40.13 C \ ATOM 667 CA ASN E 126 -50.583 58.664 25.676 1.00 41.31 C \ ATOM 668 CA VAL E 127 -50.238 61.419 23.071 1.00 25.18 C \ ATOM 669 CA VAL E 128 -53.897 62.084 23.875 1.00 25.88 C \ ATOM 670 CA ARG E 129 -53.080 62.881 27.500 1.00 41.75 C \ ATOM 671 CA ALA E 130 -49.636 64.349 26.834 1.00 62.19 C \ ATOM 672 CA THR E 131 -51.655 67.076 25.123 1.00 23.85 C \ ATOM 673 CA ILE E 132 -54.289 67.468 27.835 1.00 5.00 C \ ATOM 674 CA ASP E 133 -51.518 67.865 30.408 1.00 7.85 C \ ATOM 675 CA GLY E 134 -50.074 70.581 28.198 1.00 73.57 C \ ATOM 676 CA LEU E 135 -53.201 72.730 28.200 1.00 44.70 C \ ATOM 677 CA GLU E 136 -53.751 71.731 31.828 1.00 86.30 C \ ATOM 678 CA ASN E 137 -50.596 73.740 32.531 1.00 4.32 C \ ATOM 679 CA MET E 138 -51.316 76.553 30.075 1.00 70.24 C \ ATOM 680 CA ASN E 139 -50.710 79.655 32.195 1.00 83.11 C \ ATOM 681 CA SER E 140 -53.275 82.285 31.211 1.00 29.77 C \ ATOM 682 CA PRO E 141 -52.094 85.916 30.946 1.00 40.18 C \ ATOM 683 CA GLU E 142 -54.491 86.599 33.820 1.00 90.08 C \ ATOM 684 CA MET E 143 -54.001 86.020 37.550 1.00 98.01 C \ ATOM 685 CA VAL E 144 -50.268 86.254 36.836 1.00 54.87 C \ ATOM 686 CA ALA E 145 -50.628 89.928 37.715 1.00 2.77 C \ ATOM 687 CA ALA E 146 -52.106 88.791 41.026 1.00 8.35 C \ ATOM 688 CA LYS E 147 -49.677 85.898 41.478 1.00 54.89 C \ ATOM 689 CA ARG E 148 -47.078 88.632 41.936 1.00 41.40 C \ ATOM 690 CA GLY E 149 -48.933 91.916 42.267 1.00 4.42 C \ ATOM 691 CA LYS E 150 -50.080 92.687 45.803 1.00 4.75 C \ TER 692 LYS E 150 \ TER 793 SER F 100 \ TER 923 ALA H 129 \ TER 1051 ARG I 127 \ TER 1169 VAL K 117 \ TER 1293 ALA L 123 \ TER 1382 ARG O 88 \ TER 1465 ALA P 82 \ TER 1546 VAL Q 80 \ TER 1602 HIS R 55 \ MASTER 126 0 0 0 0 0 0 6 1591 11 0 127 \ END \ \ ""","3iy8E4") cmd.hide("everything") cmd.color("grey70") rebuild cmd.select("rainbow","resi 18-32 + resi 35-45 + resi 99-110") cmd.spectrum(expression="count", selection="resi 18-32 + resi 35-45 + resi 99-110") cmd.show_as("cartoon") cmd.zoom("3iy8E4",animate=-1) cmd.delete("rainbow")