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HEADER RIBOSOME 16-APR-09 3IY8 \
TITLE LEISHMANIA TARENTOLAE MITONCHONDRIAL RIBOSOME SMALL SUBUNIT \
COMPND MOL_ID: 1; \
COMPND 2 MOLECULE: LEISHMANIA TARENTOLAE MITOCHONDRIAL SMALL SUBUNIT; \
COMPND 3 CHAIN: A; \
COMPND 4 MOL_ID: 2; \
COMPND 5 MOLECULE: 30S RIBOSOMAL PROTEIN S5; \
COMPND 6 CHAIN: E; \
COMPND 7 MOL_ID: 3; \
COMPND 8 MOLECULE: 30S RIBOSOMAL PROTEIN S6; \
COMPND 9 CHAIN: F; \
COMPND 10 MOL_ID: 4; \
COMPND 11 MOLECULE: 30S RIBOSOMAL PROTEIN S8; \
COMPND 12 CHAIN: H; \
COMPND 13 MOL_ID: 5; \
COMPND 14 MOLECULE: 30S RIBOSOMAL PROTEIN S9; \
COMPND 15 CHAIN: I; \
COMPND 16 MOL_ID: 6; \
COMPND 17 MOLECULE: 30S RIBOSOMAL PROTEIN S11; \
COMPND 18 CHAIN: K; \
COMPND 19 MOL_ID: 7; \
COMPND 20 MOLECULE: 30S RIBOSOMAL PROTEIN S12; \
COMPND 21 CHAIN: L; \
COMPND 22 MOL_ID: 8; \
COMPND 23 MOLECULE: 30S RIBOSOMAL PROTEIN S15; \
COMPND 24 CHAIN: O; \
COMPND 25 MOL_ID: 9; \
COMPND 26 MOLECULE: 30S RIBOSOMAL PROTEIN S16; \
COMPND 27 CHAIN: P; \
COMPND 28 MOL_ID: 10; \
COMPND 29 MOLECULE: 30S RIBOSOMAL PROTEIN S17; \
COMPND 30 CHAIN: Q; \
COMPND 31 MOL_ID: 11; \
COMPND 32 MOLECULE: 30S RIBOSOMAL PROTEIN S18; \
COMPND 33 CHAIN: R \
SOURCE MOL_ID: 1; \
SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA TARENTOLAE; \
SOURCE 3 ORGANISM_TAXID: 5689; \
SOURCE 4 MOL_ID: 2; \
SOURCE 5 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \
SOURCE 6 ORGANISM_TAXID: 83333; \
SOURCE 7 MOL_ID: 3; \
SOURCE 8 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \
SOURCE 9 ORGANISM_TAXID: 83333; \
SOURCE 10 MOL_ID: 4; \
SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \
SOURCE 12 ORGANISM_TAXID: 83333; \
SOURCE 13 MOL_ID: 5; \
SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \
SOURCE 15 ORGANISM_TAXID: 83333; \
SOURCE 16 MOL_ID: 6; \
SOURCE 17 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \
SOURCE 18 ORGANISM_TAXID: 83333; \
SOURCE 19 MOL_ID: 7; \
SOURCE 20 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \
SOURCE 21 ORGANISM_TAXID: 83333; \
SOURCE 22 MOL_ID: 8; \
SOURCE 23 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \
SOURCE 24 ORGANISM_TAXID: 83333; \
SOURCE 25 MOL_ID: 9; \
SOURCE 26 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \
SOURCE 27 ORGANISM_TAXID: 83333; \
SOURCE 28 MOL_ID: 10; \
SOURCE 29 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \
SOURCE 30 ORGANISM_TAXID: 83333; \
SOURCE 31 MOL_ID: 11; \
SOURCE 32 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \
SOURCE 33 ORGANISM_TAXID: 83333 \
KEYWDS LEISHMANIA TARENTOLAE, MITOCHONDRIAL RIBOSOME, CRYOEM, MINIMAL RNA., \
KEYWDS 2 ANTIBIOTIC RESISTANCE, RIBONUCLEOPROTEIN, RIBOSOMAL PROTEIN, RNA- \
KEYWDS 3 BINDING, RRNA-BINDING, REPRESSOR, TRANSLATION REGULATION, TRNA- \
KEYWDS 4 BINDING, METHYLATION, ENDONUCLEASE, HYDROLASE, NUCLEASE, RIBOSOME \
EXPDTA ELECTRON MICROSCOPY \
MDLTYP CA ATOMS ONLY, CHAIN E, F, H, I, K, L, O, P, Q, R; P ATOMS ONLY, CHAIN\
MDLTYP 2A \
AUTHOR M.R.SHARMA,T.M.BOOTH,L.SIMPSON,D.A.MASLOV,R.K.AGRAWAL \
REVDAT 2 18-JUL-18 3IY8 1 REMARK \
REVDAT 1 07-JUL-09 3IY8 0 \
JRNL AUTH M.R.SHARMA,T.M.BOOTH,L.SIMPSON,D.A.MASLOV,R.K.AGRAWAL \
JRNL TITL STRUCTURE OF A MITOCHONDRIAL RIBOSOME WITH MINIMAL RNA \
JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 9637 2009 \
JRNL REFN ISSN 0027-8424 \
JRNL PMID 19497863 \
JRNL DOI 10.1073/PNAS.0901631106 \
REMARK 2 \
REMARK 2 RESOLUTION. 14.10 ANGSTROMS. \
REMARK 3 \
REMARK 3 REFINEMENT. \
REMARK 3 SOFTWARE PACKAGES : SPIDER \
REMARK 3 RECONSTRUCTION SCHEMA : NULL \
REMARK 3 \
REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT \
REMARK 3 PDB ENTRY : NULL \
REMARK 3 REFINEMENT SPACE : REAL \
REMARK 3 REFINEMENT PROTOCOL : NULL \
REMARK 3 REFINEMENT TARGET : NULL \
REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL \
REMARK 3 \
REMARK 3 FITTING PROCEDURE : NULL \
REMARK 3 \
REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS \
REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL \
REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL \
REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 14.10 \
REMARK 3 NUMBER OF PARTICLES : 53475 \
REMARK 3 CTF CORRECTION METHOD : NULL \
REMARK 3 \
REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL \
REMARK 3 \
REMARK 3 OTHER DETAILS: NULL \
REMARK 4 \
REMARK 4 3IY8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \
REMARK 100 \
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-09. \
REMARK 100 THE DEPOSITION ID IS D_1000160014. \
REMARK 245 \
REMARK 245 EXPERIMENTAL DETAILS \
REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE \
REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) \
REMARK 245 \
REMARK 245 ELECTRON MICROSCOPE SAMPLE \
REMARK 245 SAMPLE TYPE : PARTICLE \
REMARK 245 PARTICLE TYPE : POINT \
REMARK 245 NAME OF SAMPLE : LEISHMANIA MITOCHONDRIAL 50S \
REMARK 245 RIBOSOME \
REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.07 \
REMARK 245 SAMPLE SUPPORT DETAILS : NULL \
REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL \
REMARK 245 SAMPLE BUFFER : NULL \
REMARK 245 PH : 7.50 \
REMARK 245 SAMPLE DETAILS : MONOMER \
REMARK 245 \
REMARK 245 DATA ACQUISITION \
REMARK 245 DATE OF EXPERIMENT : NULL \
REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL \
REMARK 245 TEMPERATURE (KELVIN) : 80.00 \
REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 \
REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM \
REMARK 245 MINIMUM DEFOCUS (NM) : 1600.00 \
REMARK 245 MAXIMUM DEFOCUS (NM) : 4500.00 \
REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 \
REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 \
REMARK 245 NOMINAL CS : NULL \
REMARK 245 IMAGING MODE : BRIGHT FIELD \
REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : NULL \
REMARK 245 ILLUMINATION MODE : FLOOD BEAM \
REMARK 245 NOMINAL MAGNIFICATION : 50000 \
REMARK 245 CALIBRATED MAGNIFICATION : 50760 \
REMARK 245 SOURCE : FIELD EMISSION GUN \
REMARK 245 ACCELERATION VOLTAGE (KV) : 200 \
REMARK 245 IMAGING DETAILS : NULL \
REMARK 247 \
REMARK 247 ELECTRON MICROSCOPY \
REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON \
REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE \
REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES \
REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION \
REMARK 247 OF THE STRUCTURE FACTORS. \
REMARK 300 \
REMARK 300 BIOMOLECULE: 1 \
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \
REMARK 300 BURIED SURFACE AREA. \
REMARK 350 \
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \
REMARK 350 \
REMARK 350 BIOMOLECULE: 1 \
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: UNDECAMERIC \
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F, H, I, K, L, O, P, Q, \
REMARK 350 AND CHAINS: R \
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \
REMARK 500 \
REMARK 500 GEOMETRY AND STEREOCHEMISTRY \
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT \
REMARK 500 \
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. \
REMARK 500 \
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE \
REMARK 500 P U A 445 CA ALA H 34 0.45 \
REMARK 500 P U A 400 CA ARG R 44 0.58 \
REMARK 500 P C A 258 CA ARG L 109 0.64 \
REMARK 500 CA GLU H 123 CA LYS Q 33 0.94 \
REMARK 500 P U A 384 CA ILE F 51 0.96 \
REMARK 500 CA ILE H 125 CA TYR Q 31 1.23 \
REMARK 500 P G A 474 CA PRO K 105 1.37 \
REMARK 500 P C A 366 CA GLY H 16 1.42 \
REMARK 500 P U A 112 CA GLU Q 60 1.50 \
REMARK 500 P A A 432 CA VAL O 26 1.53 \
REMARK 500 CA ILE H 124 CA GLY Q 32 1.54 \
REMARK 500 CA TYR H 85 CA PHE Q 34 1.60 \
REMARK 500 P U A 388 CA GLU K 71 1.82 \
REMARK 500 P C A 620 CA THR K 18 1.97 \
REMARK 500 P A A 15 CA ASN E 123 2.00 \
REMARK 500 P A A 361 CA THR H 11 2.06 \
REMARK 500 P C A 622 CA ARG K 81 2.10 \
REMARK 500 P G A 242 CA GLY L 67 2.11 \
REMARK 500 P U A 389 CA THR K 99 2.12 \
REMARK 500 \
REMARK 500 REMARK: NULL \
REMARK 900 \
REMARK 900 RELATED ENTRIES \
REMARK 900 RELATED ID: EMD-5113 RELATED DB: EMDB \
REMARK 900 LEISHMANIA TARENTOLAE MITOCHONDRIAL RIBOSOME \
DBREF 3IY8 E 1 150 UNP P0A7W1 RS5_ECOLI 10 159 \
DBREF 3IY8 F 1 100 UNP P02358 RS6_ECOLI 1 100 \
DBREF 3IY8 H 1 129 UNP P0A7W7 RS8_ECOLI 2 130 \
DBREF 3IY8 I 1 127 UNP P0A7X3 RS9_ECOLI 4 130 \
DBREF 3IY8 K 1 117 UNP P0A7R9 RS11_ECOLI 13 129 \
DBREF 3IY8 L 1 123 UNP P0A7S3 RS12_ECOLI 2 124 \
DBREF 3IY8 O 1 88 UNP Q8X9M2 RS15_ECO57 2 89 \
DBREF 3IY8 P 1 82 UNP P0A7T3 RS16_ECOLI 1 82 \
DBREF 3IY8 Q 1 80 UNP P0AG63 RS17_ECOLI 4 83 \
DBREF 3IY8 R 1 55 UNP Q1R358 RS18_ECOUT 20 74 \
DBREF 3IY8 A 1 627 PDB 3IY8 3IY8 1 627 \
SEQRES 1 A 540 A U U A U A C G U A G U C \
SEQRES 2 A 540 A A U U G U U A U U A U U \
SEQRES 3 A 540 C A U A U U A A U U U U U \
SEQRES 4 A 540 U U A A A A G U U U U U U \
SEQRES 5 A 540 A A U U U U A U A U U A G \
SEQRES 6 A 540 U U U A U U U G U U U A C \
SEQRES 7 A 540 A A A U U U A A A U U A U \
SEQRES 8 A 540 A U U U C A U U A U U U A \
SEQRES 9 A 540 G G A A U A G U U A A U U \
SEQRES 10 A 540 A G A U U U A U U U G U U \
SEQRES 11 A 540 A A U G C U A U U A A A G \
SEQRES 12 A 540 G G G U G U G G A A A A A \
SEQRES 13 A 540 G U G U U A A A U U A U U \
SEQRES 14 A 540 U A U A U A U U U A A A U \
SEQRES 15 A 540 A A U A A A U A A A A U A \
SEQRES 16 A 540 U A A C U U A U U A G U C \
SEQRES 17 A 540 A G A A A U G G A U G C G \
SEQRES 18 A 540 A G C C G U U G C G G U A \
SEQRES 19 A 540 A U U U C U A U G C U U U \
SEQRES 20 A 540 U A A A U A U U A U A C A \
SEQRES 21 A 540 U U U A U U U U A U U A U \
SEQRES 22 A 540 A U A U G C A A A U A A A \
SEQRES 23 A 540 A A A U G A C A C A U U A \
SEQRES 24 A 540 A U U A U U A A U U A U A \
SEQRES 25 A 540 U U A U A U U A U A U U U \
SEQRES 26 A 540 A U U C A C A U A A G U C \
SEQRES 27 A 540 A A C A A U A U C U A U U \
SEQRES 28 A 540 U A C U G U U U U U G A C \
SEQRES 29 A 540 A A C A U G A U A A G G A \
SEQRES 30 A 540 U U A U A A A U G G A A U \
SEQRES 31 A 540 U A U A A U U U U A U A A \
SEQRES 32 A 540 U C A A A A C U A A U U U \
SEQRES 33 A 540 A U U A U A U U A A A U U \
SEQRES 34 A 540 A G C A U G U U U A G A U \
SEQRES 35 A 540 A A A A C A A U A A A U U \
SEQRES 36 A 540 U A G A A G G U A U U C U \
SEQRES 37 A 540 U G C C C A C C A U U C U \
SEQRES 38 A 540 U U G U A A U A A A G A C \
SEQRES 39 A 540 A A C G U G C A G U A A U \
SEQRES 40 A 540 U A A U A U A U U U A U A \
SEQRES 41 A 540 A A A A U A U A U U U U C \
SEQRES 42 A 540 U C A U G U U \
SEQRES 1 E 150 GLU LEU GLN GLU LYS LEU ILE ALA VAL ASN ARG VAL SER \
SEQRES 2 E 150 LYS THR VAL LYS GLY GLY ARG ILE PHE SER PHE THR ALA \
SEQRES 3 E 150 LEU THR VAL VAL GLY ASP GLY ASN GLY ARG VAL GLY PHE \
SEQRES 4 E 150 GLY TYR GLY LYS ALA ARG GLU VAL PRO ALA ALA ILE GLN \
SEQRES 5 E 150 LYS ALA MET GLU LYS ALA ARG ARG ASN MET ILE ASN VAL \
SEQRES 6 E 150 ALA LEU ASN ASN GLY THR LEU GLN HIS PRO VAL LYS GLY \
SEQRES 7 E 150 VAL HIS THR GLY SER ARG VAL PHE MET GLN PRO ALA SER \
SEQRES 8 E 150 GLU GLY THR GLY ILE ILE ALA GLY GLY ALA MET ARG ALA \
SEQRES 9 E 150 VAL LEU GLU VAL ALA GLY VAL HIS ASN VAL LEU ALA LYS \
SEQRES 10 E 150 ALA TYR GLY SER THR ASN PRO ILE ASN VAL VAL ARG ALA \
SEQRES 11 E 150 THR ILE ASP GLY LEU GLU ASN MET ASN SER PRO GLU MET \
SEQRES 12 E 150 VAL ALA ALA LYS ARG GLY LYS \
SEQRES 1 F 100 MET ARG HIS TYR GLU ILE VAL PHE MET VAL HIS PRO ASP \
SEQRES 2 F 100 GLN SER GLU GLN VAL PRO GLY MET ILE GLU ARG TYR THR \
SEQRES 3 F 100 ALA ALA ILE THR GLY ALA GLU GLY LYS ILE HIS ARG LEU \
SEQRES 4 F 100 GLU ASP TRP GLY ARG ARG GLN LEU ALA TYR PRO ILE ASN \
SEQRES 5 F 100 LYS LEU HIS LYS ALA HIS TYR VAL LEU MET ASN VAL GLU \
SEQRES 6 F 100 ALA PRO GLN GLU VAL ILE ASP GLU LEU GLU THR THR PHE \
SEQRES 7 F 100 ARG PHE ASN ASP ALA VAL ILE ARG SER MET VAL MET ARG \
SEQRES 8 F 100 THR LYS HIS ALA VAL THR GLU ALA SER \
SEQRES 1 H 129 SER MET GLN ASP PRO ILE ALA ASP MET LEU THR ARG ILE \
SEQRES 2 H 129 ARG ASN GLY GLN ALA ALA ASN LYS ALA ALA VAL THR MET \
SEQRES 3 H 129 PRO SER SER LYS LEU LYS VAL ALA ILE ALA ASN VAL LEU \
SEQRES 4 H 129 LYS GLU GLU GLY PHE ILE GLU ASP PHE LYS VAL GLU GLY \
SEQRES 5 H 129 ASP THR LYS PRO GLU LEU GLU LEU THR LEU LYS TYR PHE \
SEQRES 6 H 129 GLN GLY LYS ALA VAL VAL GLU SER ILE GLN ARG VAL SER \
SEQRES 7 H 129 ARG PRO GLY LEU ARG ILE TYR LYS ARG LYS ASP GLU LEU \
SEQRES 8 H 129 PRO LYS VAL MET ALA GLY LEU GLY ILE ALA VAL VAL SER \
SEQRES 9 H 129 THR SER LYS GLY VAL MET THR ASP ARG ALA ALA ARG GLN \
SEQRES 10 H 129 ALA GLY LEU GLY GLY GLU ILE ILE CYS TYR VAL ALA \
SEQRES 1 I 127 ASN GLN TYR TYR GLY THR GLY ARG ARG LYS SER SER ALA \
SEQRES 2 I 127 ALA ARG VAL PHE ILE LYS PRO GLY ASN GLY LYS ILE VAL \
SEQRES 3 I 127 ILE ASN GLN ARG SER LEU GLU GLN TYR PHE GLY ARG GLU \
SEQRES 4 I 127 THR ALA ARG MET VAL VAL ARG GLN PRO LEU GLU LEU VAL \
SEQRES 5 I 127 ASP MET VAL GLU LYS LEU ASP LEU TYR ILE THR VAL LYS \
SEQRES 6 I 127 GLY GLY GLY ILE SER GLY GLN ALA GLY ALA ILE ARG HIS \
SEQRES 7 I 127 GLY ILE THR ARG ALA LEU MET GLU TYR ASP GLU SER LEU \
SEQRES 8 I 127 ARG SER GLU LEU ARG LYS ALA GLY PHE VAL THR ARG ASP \
SEQRES 9 I 127 ALA ARG GLN VAL GLU ARG LYS LYS VAL GLY LEU ARG LYS \
SEQRES 10 I 127 ALA ARG ARG ARG PRO GLN PHE SER LYS ARG \
SEQRES 1 K 117 ARG LYS GLN VAL SER ASP GLY VAL ALA HIS ILE HIS ALA \
SEQRES 2 K 117 SER PHE ASN ASN THR ILE VAL THR ILE THR ASP ARG GLN \
SEQRES 3 K 117 GLY ASN ALA LEU GLY TRP ALA THR ALA GLY GLY SER GLY \
SEQRES 4 K 117 PHE ARG GLY SER ARG LYS SER THR PRO PHE ALA ALA GLN \
SEQRES 5 K 117 VAL ALA ALA GLU ARG CYS ALA ASP ALA VAL LYS GLU TYR \
SEQRES 6 K 117 GLY ILE LYS ASN LEU GLU VAL MET VAL LYS GLY PRO GLY \
SEQRES 7 K 117 PRO GLY ARG GLU SER THR ILE ARG ALA LEU ASN ALA ALA \
SEQRES 8 K 117 GLY PHE ARG ILE THR ASN ILE THR ASP VAL THR PRO ILE \
SEQRES 9 K 117 PRO HIS ASN GLY CYS ARG PRO PRO LYS LYS ARG ARG VAL \
SEQRES 1 L 123 ALA THR VAL ASN GLN LEU VAL ARG LYS PRO ARG ALA ARG \
SEQRES 2 L 123 LYS VAL ALA LYS SER ASN VAL PRO ALA LEU GLU ALA CYS \
SEQRES 3 L 123 PRO GLN LYS ARG GLY VAL CYS THR ARG VAL TYR THR THR \
SEQRES 4 L 123 THR PRO LYS LYS PRO ASN SER ALA LEU ARG LYS VAL CYS \
SEQRES 5 L 123 ARG VAL ARG LEU THR ASN GLY PHE GLU VAL THR SER TYR \
SEQRES 6 L 123 ILE GLY GLY GLU GLY HIS ASN LEU GLN GLU HIS SER VAL \
SEQRES 7 L 123 ILE LEU ILE ARG GLY GLY ARG VAL LYS ASP LEU PRO GLY \
SEQRES 8 L 123 VAL ARG TYR HIS THR VAL ARG GLY ALA LEU ASP CYS SER \
SEQRES 9 L 123 GLY VAL LYS ASP ARG LYS GLN ALA ARG SER LYS TYR GLY \
SEQRES 10 L 123 VAL LYS ARG PRO LYS ALA \
SEQRES 1 O 88 SER LEU SER THR GLU ALA THR ALA LYS ILE VAL SER GLU \
SEQRES 2 O 88 PHE GLY ARG ASP ALA ASN ASP THR GLY SER THR GLU VAL \
SEQRES 3 O 88 GLN VAL ALA LEU LEU THR ALA GLN ILE ASN HIS LEU GLN \
SEQRES 4 O 88 GLY HIS PHE ALA GLU HIS LYS LYS ASP HIS HIS SER ARG \
SEQRES 5 O 88 ARG GLY LEU LEU ARG MET VAL SER GLN ARG ARG LYS LEU \
SEQRES 6 O 88 LEU ASP TYR LEU LYS ARG LYS ASP VAL ALA ARG TYR THR \
SEQRES 7 O 88 ARG LEU ILE GLU ARG LEU GLY LEU ARG ARG \
SEQRES 1 P 82 MET VAL THR ILE ARG LEU ALA ARG HIS GLY ALA LYS LYS \
SEQRES 2 P 82 ARG PRO PHE TYR GLN VAL VAL VAL ALA ASP SER ARG ASN \
SEQRES 3 P 82 ALA ARG ASN GLY ARG PHE ILE GLU ARG VAL GLY PHE PHE \
SEQRES 4 P 82 ASN PRO ILE ALA SER GLU LYS GLU GLU GLY THR ARG LEU \
SEQRES 5 P 82 ASP LEU ASP ARG ILE ALA HIS TRP VAL GLY GLN GLY ALA \
SEQRES 6 P 82 THR ILE SER ASP ARG VAL ALA ALA LEU ILE LYS GLU VAL \
SEQRES 7 P 82 ASN LYS ALA ALA \
SEQRES 1 Q 80 LYS ILE ARG THR LEU GLN GLY ARG VAL VAL SER ASP LYS \
SEQRES 2 Q 80 MET GLU LYS SER ILE VAL VAL ALA ILE GLU ARG PHE VAL \
SEQRES 3 Q 80 LYS HIS PRO ILE TYR GLY LYS PHE ILE LYS ARG THR THR \
SEQRES 4 Q 80 LYS LEU HIS VAL HIS ASP GLU ASN ASN GLU CYS GLY ILE \
SEQRES 5 Q 80 GLY ASP VAL VAL GLU ILE ARG GLU CYS ARG PRO LEU SER \
SEQRES 6 Q 80 LYS THR LYS SER TRP THR LEU VAL ARG VAL VAL GLU LYS \
SEQRES 7 Q 80 ALA VAL \
SEQRES 1 R 55 GLU ILE ASP TYR LYS ASP ILE ALA THR LEU LYS ASN TYR \
SEQRES 2 R 55 ILE THR GLU SER GLY LYS ILE VAL PRO SER ARG ILE THR \
SEQRES 3 R 55 GLY THR ARG ALA LYS TYR GLN ARG GLN LEU ALA ARG ALA \
SEQRES 4 R 55 ILE LYS ARG ALA ARG TYR LEU SER LEU LEU PRO TYR THR \
SEQRES 5 R 55 ASP ARG HIS \
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 \
ORIGX1 1.000000 0.000000 0.000000 0.00000 \
ORIGX2 0.000000 1.000000 0.000000 0.00000 \
ORIGX3 0.000000 0.000000 1.000000 0.00000 \
SCALE1 1.000000 0.000000 0.000000 0.00000 \
SCALE2 0.000000 1.000000 0.000000 0.00000 \
SCALE3 0.000000 0.000000 1.000000 0.00000 \
TER 541 U A 627 \
TER 692 LYS E 150 \
ATOM 693 CA MET F 1 -1.350 32.843 83.136 1.00 0.93 C \
ATOM 694 CA ARG F 2 -4.354 31.058 81.630 1.00 93.97 C \
ATOM 695 CA HIS F 3 -6.904 28.846 83.398 1.00 59.40 C \
ATOM 696 CA TYR F 4 -7.579 25.237 82.389 1.00 58.64 C \
ATOM 697 CA GLU F 5 -9.567 22.054 83.043 1.00 42.79 C \
ATOM 698 CA ILE F 6 -8.055 18.627 82.379 1.00 53.88 C \
ATOM 699 CA VAL F 7 -9.878 15.371 83.122 1.00 19.36 C \
ATOM 700 CA PHE F 8 -7.738 12.264 82.662 1.00 51.35 C \
ATOM 701 CA MET F 9 -9.095 8.719 82.800 1.00 47.31 C \
ATOM 702 CA VAL F 10 -6.513 6.111 83.799 1.00 24.33 C \
ATOM 703 CA HIS F 11 -6.777 2.378 83.065 1.00 50.64 C \
ATOM 704 CA PRO F 12 -9.205 0.615 85.461 1.00 55.54 C \
ATOM 705 CA ASP F 13 -6.599 -1.884 86.689 1.00 5.88 C \
ATOM 706 CA GLN F 14 -4.106 0.877 87.502 1.00 55.49 C \
ATOM 707 CA SER F 15 -6.200 2.989 89.865 1.00 48.68 C \
ATOM 708 CA GLU F 16 -3.548 2.675 92.570 1.00 3.72 C \
ATOM 709 CA GLN F 17 -1.328 4.831 90.356 1.00 72.76 C \
ATOM 710 CA VAL F 18 -3.948 7.576 90.030 1.00 40.30 C \
ATOM 711 CA PRO F 19 -3.199 8.995 93.504 1.00 72.62 C \
ATOM 712 CA GLY F 20 0.510 9.018 92.725 1.00 95.56 C \
ATOM 713 CA MET F 21 -0.087 10.562 89.307 1.00 38.29 C \
ATOM 714 CA ILE F 22 -1.905 13.471 90.936 1.00 53.58 C \
ATOM 715 CA GLU F 23 0.976 14.460 93.216 1.00 93.79 C \
ATOM 716 CA ARG F 24 3.417 14.671 90.304 1.00 90.15 C \
ATOM 717 CA TYR F 25 1.182 16.851 88.129 1.00 64.74 C \
ATOM 718 CA THR F 26 -0.063 18.990 91.021 1.00 76.79 C \
ATOM 719 CA ALA F 27 3.472 19.468 92.345 1.00 91.00 C \
ATOM 720 CA ALA F 28 4.677 20.555 88.904 1.00 3.58 C \
ATOM 721 CA ILE F 29 1.865 23.090 88.538 1.00 43.75 C \
ATOM 722 CA THR F 30 2.730 24.567 91.931 1.00 74.20 C \
ATOM 723 CA GLY F 31 6.391 24.608 90.953 1.00 4.15 C \
ATOM 724 CA ALA F 32 5.413 26.423 87.768 1.00 70.29 C \
ATOM 725 CA GLU F 33 4.122 29.576 89.464 1.00 7.77 C \
ATOM 726 CA GLY F 34 0.617 28.236 88.891 1.00 6.86 C \
ATOM 727 CA LYS F 35 -2.521 27.573 90.931 1.00 83.83 C \
ATOM 728 CA ILE F 36 -4.954 24.697 91.531 1.00 54.77 C \
ATOM 729 CA HIS F 37 -8.483 25.840 92.377 1.00 78.47 C \
ATOM 730 CA ARG F 38 -10.403 22.608 91.727 1.00 57.78 C \
ATOM 731 CA LEU F 39 -9.889 18.864 92.188 1.00 76.42 C \
ATOM 732 CA GLU F 40 -11.899 15.654 92.547 1.00 8.15 C \
ATOM 733 CA ASP F 41 -11.495 11.881 92.268 1.00 3.94 C \
ATOM 734 CA TRP F 42 -14.347 10.129 90.460 1.00 40.67 C \
ATOM 735 CA GLY F 43 -12.677 6.737 90.675 1.00 22.38 C \
ATOM 736 CA ARG F 44 -13.942 3.861 88.549 1.00 0.55 C \
ATOM 737 CA ARG F 45 -17.255 3.839 86.671 1.00 3.15 C \
ATOM 738 CA GLN F 46 -18.999 2.195 83.713 1.00 80.26 C \
ATOM 739 CA LEU F 47 -18.387 3.679 80.260 1.00 53.88 C \
ATOM 740 CA ALA F 48 -20.781 4.629 77.462 1.00 35.51 C \
ATOM 741 CA TYR F 49 -18.662 2.532 75.109 1.00 59.55 C \
ATOM 742 CA PRO F 50 -15.675 0.188 75.639 1.00 30.03 C \
ATOM 743 CA ILE F 51 -13.301 3.038 74.798 1.00 53.42 C \
ATOM 744 CA ASN F 52 -9.883 1.450 74.293 1.00 6.28 C \
ATOM 745 CA LYS F 53 -11.463 -1.855 75.345 1.00 72.13 C \
ATOM 746 CA LEU F 54 -12.827 -2.720 78.796 1.00 59.35 C \
ATOM 747 CA HIS F 55 -16.002 -1.068 80.104 1.00 85.52 C \
ATOM 748 CA LYS F 56 -14.743 1.043 83.006 1.00 70.21 C \
ATOM 749 CA ALA F 57 -12.045 3.582 83.845 1.00 21.71 C \
ATOM 750 CA HIS F 58 -10.738 5.835 86.613 1.00 50.96 C \
ATOM 751 CA TYR F 59 -11.765 9.496 86.324 1.00 43.99 C \
ATOM 752 CA VAL F 60 -10.117 12.641 87.696 1.00 64.72 C \
ATOM 753 CA LEU F 61 -10.511 16.383 87.083 1.00 60.74 C \
ATOM 754 CA MET F 62 -8.306 19.433 87.605 1.00 57.06 C \
ATOM 755 CA ASN F 63 -9.132 22.967 86.436 1.00 72.46 C \
ATOM 756 CA VAL F 64 -5.683 24.479 86.975 1.00 45.91 C \
ATOM 757 CA GLU F 65 -4.410 27.916 85.928 1.00 70.75 C \
ATOM 758 CA ALA F 66 -0.700 27.284 85.347 1.00 64.36 C \
ATOM 759 CA PRO F 67 0.954 28.825 82.246 1.00 43.06 C \
ATOM 760 CA GLN F 68 0.143 27.047 78.975 1.00 69.10 C \
ATOM 761 CA GLU F 69 3.855 26.283 78.565 1.00 89.77 C \
ATOM 762 CA VAL F 70 4.089 23.874 81.512 1.00 64.08 C \
ATOM 763 CA ILE F 71 0.723 22.283 80.690 1.00 42.06 C \
ATOM 764 CA ASP F 72 1.872 21.553 77.140 1.00 95.94 C \
ATOM 765 CA GLU F 73 4.516 19.430 78.862 1.00 75.61 C \
ATOM 766 CA LEU F 74 1.640 17.338 80.203 1.00 34.06 C \
ATOM 767 CA GLU F 75 0.369 16.122 76.824 1.00 82.54 C \
ATOM 768 CA THR F 76 3.679 14.281 76.461 1.00 87.11 C \
ATOM 769 CA THR F 77 3.813 12.537 79.841 1.00 77.84 C \
ATOM 770 CA PHE F 78 0.118 11.861 79.233 1.00 54.20 C \
ATOM 771 CA ARG F 79 0.538 10.215 75.830 1.00 2.77 C \
ATOM 772 CA PHE F 80 3.624 8.212 76.805 1.00 83.88 C \
ATOM 773 CA ASN F 81 1.708 6.666 79.707 1.00 57.11 C \
ATOM 774 CA ASP F 82 -0.326 3.548 78.932 1.00 60.60 C \
ATOM 775 CA ALA F 83 -2.008 3.985 82.287 1.00 38.52 C \
ATOM 776 CA VAL F 84 -4.155 6.875 81.078 1.00 24.83 C \
ATOM 777 CA ILE F 85 -6.581 5.694 78.393 1.00 38.03 C \
ATOM 778 CA ARG F 86 -7.917 9.070 77.252 1.00 46.93 C \
ATOM 779 CA SER F 87 -6.849 12.680 77.788 1.00 59.88 C \
ATOM 780 CA MET F 88 -9.104 15.715 77.437 1.00 49.10 C \
ATOM 781 CA VAL F 89 -8.249 19.255 78.538 1.00 30.05 C \
ATOM 782 CA MET F 90 -10.267 22.370 77.684 1.00 55.59 C \
ATOM 783 CA ARG F 91 -9.317 26.037 77.991 1.00 2.01 C \
ATOM 784 CA THR F 92 -9.796 28.538 80.819 1.00 2.57 C \
ATOM 785 CA LYS F 93 -13.271 30.103 80.585 1.00 9.88 C \
ATOM 786 CA HIS F 94 -12.533 31.706 83.962 1.00 2.16 C \
ATOM 787 CA ALA F 95 -11.732 30.023 87.277 1.00 0.80 C \
ATOM 788 CA VAL F 96 -14.022 27.100 88.077 1.00 63.45 C \
ATOM 789 CA THR F 97 -14.412 25.955 91.688 1.00 81.09 C \
ATOM 790 CA GLU F 98 -16.471 23.463 93.710 1.00 4.27 C \
ATOM 791 CA ALA F 99 -19.703 21.940 92.366 1.00 55.20 C \
ATOM 792 CA SER F 100 -19.150 19.613 89.395 1.00 68.21 C \
TER 793 SER F 100 \
TER 923 ALA H 129 \
TER 1051 ARG I 127 \
TER 1169 VAL K 117 \
TER 1293 ALA L 123 \
TER 1382 ARG O 88 \
TER 1465 ALA P 82 \
TER 1546 VAL Q 80 \
TER 1602 HIS R 55 \
MASTER 126 0 0 0 0 0 0 6 1591 11 0 127 \
END \
\
""","3iy8F2")
cmd.hide("everything")
cmd.color("grey70")
rebuild
cmd.select("rainbow","resi 2-12 + resi 55-66 + resi 67-82 + resi 83-92")
cmd.spectrum(expression="count", selection="resi 2-12 + resi 55-66 + resi 67-82 + resi 83-92")
cmd.show_as("cartoon")
cmd.zoom("3iy8F2",animate=-1)
cmd.delete("rainbow")