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set ribbon_radius = 0.5 set orthoscopic = 1 bg_color white set opaque_background, off set cartoon_fancy_sheets, 1 set cartoon_fancy_helices, 1 set cartoon_smooth_loops,1 set cartoon_rect_length, 1.2 set cartoon_rect_width, 0.3 set cartoon_dumbbell_length, 1.2 set cartoon_dumbbell_radius, 0.1 set cartoon_dumbbell_width, 0.1 cmd.read_pdbstr("""\ HEADER RIBOSOMAL PROTEIN 23-JUL-10 3IYX \ TITLE COORDINATES OF THE B1B BRIDGE-FORMING PROTEIN STRUCTURES FITTED INTO \ TITLE 2 THE CRYO-EM MAP OF E.COLI 70S RIBOSOME (EMD-1056) \ COMPND MOL_ID: 1; \ COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S13; \ COMPND 3 CHAIN: M; \ COMPND 4 MOL_ID: 2; \ COMPND 5 MOLECULE: 50S RIBOSOMAL PROTEIN L5; \ COMPND 6 CHAIN: F; \ COMPND 7 MOL_ID: 3; \ COMPND 8 MOLECULE: 50S RIBOSOMAL PROTEIN L31; \ COMPND 9 CHAIN: A \ SOURCE MOL_ID: 1; \ SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 3 ORGANISM_TAXID: 701177; \ SOURCE 4 STRAIN: O55:H7; \ SOURCE 5 MOL_ID: 2; \ SOURCE 6 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 7 ORGANISM_TAXID: 701177; \ SOURCE 8 STRAIN: O55:H7; \ SOURCE 9 MOL_ID: 3; \ SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; \ SOURCE 11 ORGANISM_TAXID: 701177; \ SOURCE 12 STRAIN: O55:H7 \ KEYWDS RIBOSOMAL INTERSUBUNIT BRIDGES, B1B-BRIDGE, RATCHET-LIKE MOTION, \ KEYWDS 2 RIBOSOMAL PROTEIN L31, RIBOSOMAL PROTEIN \ EXPDTA ELECTRON MICROSCOPY \ MDLTYP CA ATOMS ONLY, CHAIN M, F, A \ AUTHOR M.SHASMAL,B.CHAKRABORTY,J.SENGUPTA \ REVDAT 4 21-FEB-24 3IYX 1 REMARK \ REVDAT 3 18-DEC-19 3IYX 1 CRYST1 SCALE \ REVDAT 2 18-JUL-18 3IYX 1 REMARK \ REVDAT 1 01-SEP-10 3IYX 0 \ JRNL AUTH M.SHASMAL,B.CHAKRABORTY,J.SENGUPTA \ JRNL TITL INTRINSIC MOLECULAR PROPERTIES OF THE PROTEIN-PROTEIN BRIDGE \ JRNL TITL 2 FACILITATE RATCHET-LIKE MOTION OF THE RIBOSOME \ JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 399 192 2010 \ JRNL REFN ISSN 0006-291X \ JRNL PMID 20643101 \ JRNL DOI 10.1016/J.BBRC.2010.07.053 \ REMARK 2 \ REMARK 2 RESOLUTION. 9.00 ANGSTROMS. \ REMARK 3 \ REMARK 3 REFINEMENT. \ REMARK 3 SOFTWARE PACKAGES : SPIDER \ REMARK 3 RECONSTRUCTION SCHEMA : NULL \ REMARK 3 \ REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT \ REMARK 3 PDB ENTRY : 2I2P \ REMARK 3 REFINEMENT SPACE : NULL \ REMARK 3 REFINEMENT PROTOCOL : NULL \ REMARK 3 REFINEMENT TARGET : NULL \ REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL \ REMARK 3 \ REMARK 3 FITTING PROCEDURE : NULL \ REMARK 3 \ REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS \ REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 2.820 \ REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL \ REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 9.000 \ REMARK 3 NUMBER OF PARTICLES : 52181 \ REMARK 3 CTF CORRECTION METHOD : NULL \ REMARK 3 \ REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: TMV \ REMARK 3 \ REMARK 3 OTHER DETAILS: NULL \ REMARK 4 \ REMARK 4 3IYX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 \ REMARK 100 \ REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-AUG-10. \ REMARK 100 THE DEPOSITION ID IS D_1000160039. \ REMARK 245 \ REMARK 245 EXPERIMENTAL DETAILS \ REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE \ REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) \ REMARK 245 \ REMARK 245 ELECTRON MICROSCOPE SAMPLE \ REMARK 245 SAMPLE TYPE : PARTICLE \ REMARK 245 PARTICLE TYPE : POINT \ REMARK 245 NAME OF SAMPLE : E.COLI 70S RIBOSOME \ REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL \ REMARK 245 SAMPLE SUPPORT DETAILS : QUANTIFOIL HOLLEY CARBON FILM \ REMARK 245 GRIDS \ REMARK 245 SAMPLE VITRIFICATION DETAILS : RAPID-FREEZING IN LIQUID ETHANE \ REMARK 245 SAMPLE BUFFER : POLYMIX BUFFER \ REMARK 245 PH : 7.50 \ REMARK 245 SAMPLE DETAILS : NULL \ REMARK 245 \ REMARK 245 DATA ACQUISITION \ REMARK 245 DATE OF EXPERIMENT : NULL \ REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL \ REMARK 245 TEMPERATURE (KELVIN) : 93.00 \ REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 \ REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM \ REMARK 245 MINIMUM DEFOCUS (NM) : 2000.00 \ REMARK 245 MAXIMUM DEFOCUS (NM) : 4000.00 \ REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 \ REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 \ REMARK 245 NOMINAL CS : 2.00 \ REMARK 245 IMAGING MODE : BRIGHT FIELD \ REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 2000.00 \ REMARK 245 ILLUMINATION MODE : FLOOD BEAM \ REMARK 245 NOMINAL MAGNIFICATION : 50000 \ REMARK 245 CALIBRATED MAGNIFICATION : 49696 \ REMARK 245 SOURCE : FIELD EMISSION GUN \ REMARK 245 ACCELERATION VOLTAGE (KV) : 200 \ REMARK 245 IMAGING DETAILS : NULL \ REMARK 247 \ REMARK 247 ELECTRON MICROSCOPY \ REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON \ REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE \ REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES \ REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION \ REMARK 247 OF THE STRUCTURE FACTORS. \ REMARK 300 \ REMARK 300 BIOMOLECULE: 1 \ REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM \ REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN \ REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON \ REMARK 300 BURIED SURFACE AREA. \ REMARK 350 \ REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN \ REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE \ REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS \ REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND \ REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. \ REMARK 350 \ REMARK 350 BIOMOLECULE: 1 \ REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC \ REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, F, A \ REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 \ REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 \ REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 \ REMARK 465 \ REMARK 465 MISSING RESIDUES \ REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE \ REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN \ REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) \ REMARK 465 \ REMARK 465 M RES C SSSEQI \ REMARK 465 MET M 0 \ REMARK 465 ILE M 115 \ REMARK 465 LYS M 116 \ REMARK 465 LYS M 117 \ REMARK 465 MET F 0 \ REMARK 900 \ REMARK 900 RELATED ENTRIES \ REMARK 900 RELATED ID: 2I2P RELATED DB: PDB \ REMARK 900 CRYSTAL STRUCTURE OF 30S SUBUNIT OF E. COLI RIBOSOME WITH MESSENGER \ REMARK 900 RNA AND THE ANTICODON STEM-LOOP OF P-SITE TRNA. CHAIN M: SMALL \ REMARK 900 SUBUNIT PROTEIN S13 \ REMARK 900 RELATED ID: 2I2T RELATED DB: PDB \ REMARK 900 CRYSTAL STRUCTURE OF 50S SUBUNIT OF E. COLI RIBOSOME WITH MESSENGER \ REMARK 900 RNA AND THE ANTICODON STEM-LOOP OF P-SITE TRNA. CHAIN F: LARGE \ REMARK 900 SUBUNIT PROTEIN L5 \ REMARK 900 RELATED ID: 2WRJ RELATED DB: PDB \ REMARK 900 X-RAY STRUCTURE OF THE T. THERMOPHILUS 70S RIBOSOME (CHAIN 4 WAS \ REMARK 900 USED AS TEMPLATE TO BUILD HOMOLOGY MODEL OF E.COLI L31) \ REMARK 900 RELATED ID: EMD-1056 RELATED DB: EMDB \ REMARK 900 CRYO-EM MAP OF E. COLI 70S-TRNAFMET-MF-TRNAPHE COMPLEX \ DBREF 3IYX M 0 117 UNP D3QTD7 D3QTD7_ECOCB 1 118 \ DBREF 3IYX F 0 178 UNP D3QTE7 D3QTE7_ECOCB 1 179 \ DBREF 3IYX A 1 70 UNP D3QYD6 D3QYD6_ECOCB 1 70 \ SEQRES 1 M 118 MET ALA ARG ILE ALA GLY ILE ASN ILE PRO ASP HIS LYS \ SEQRES 2 M 118 HIS ALA VAL ILE ALA LEU THR SER ILE TYR GLY VAL GLY \ SEQRES 3 M 118 LYS THR ARG SER LYS ALA ILE LEU ALA ALA ALA GLY ILE \ SEQRES 4 M 118 ALA GLU ASP VAL LYS ILE SER GLU LEU SER GLU GLY GLN \ SEQRES 5 M 118 ILE ASP THR LEU ARG ASP GLU VAL ALA LYS PHE VAL VAL \ SEQRES 6 M 118 GLU GLY ASP LEU ARG ARG GLU ILE SER MET SER ILE LYS \ SEQRES 7 M 118 ARG LEU MET ASP LEU GLY CYS TYR ARG GLY LEU ARG HIS \ SEQRES 8 M 118 ARG ARG GLY LEU PRO VAL ARG GLY GLN ARG THR LYS THR \ SEQRES 9 M 118 ASN ALA ARG THR ARG LYS GLY PRO ARG LYS PRO ILE LYS \ SEQRES 10 M 118 LYS \ SEQRES 1 F 179 MET ALA LYS LEU HIS ASP TYR TYR LYS ASP GLU VAL VAL \ SEQRES 2 F 179 LYS LYS LEU MET THR GLU PHE ASN TYR ASN SER VAL MET \ SEQRES 3 F 179 GLN VAL PRO ARG VAL GLU LYS ILE THR LEU ASN MET GLY \ SEQRES 4 F 179 VAL GLY GLU ALA ILE ALA ASP LYS LYS LEU LEU ASP ASN \ SEQRES 5 F 179 ALA ALA ALA ASP LEU ALA ALA ILE SER GLY GLN LYS PRO \ SEQRES 6 F 179 LEU ILE THR LYS ALA ARG LYS SER VAL ALA GLY PHE LYS \ SEQRES 7 F 179 ILE ARG GLN GLY TYR PRO ILE GLY CYS LYS VAL THR LEU \ SEQRES 8 F 179 ARG GLY GLU ARG MET TRP GLU PHE PHE GLU ARG LEU ILE \ SEQRES 9 F 179 THR ILE ALA VAL PRO ARG ILE ARG ASP PHE ARG GLY LEU \ SEQRES 10 F 179 SER ALA LYS SER PHE ASP GLY ARG GLY ASN TYR SER MET \ SEQRES 11 F 179 GLY VAL ARG GLU GLN ILE ILE PHE PRO GLU ILE ASP TYR \ SEQRES 12 F 179 ASP LYS VAL ASP ARG VAL ARG GLY LEU ASP ILE THR ILE \ SEQRES 13 F 179 THR THR THR ALA LYS SER ASP GLU GLU GLY ARG ALA LEU \ SEQRES 14 F 179 LEU ALA ALA PHE ASP PHE PRO PHE ARG LYS \ SEQRES 1 A 70 MET LYS LYS ASP ILE HIS PRO LYS TYR GLU GLU ILE THR \ SEQRES 2 A 70 ALA SER CYS SER CYS GLY ASN VAL MET LYS ILE ARG SER \ SEQRES 3 A 70 THR VAL GLY HIS ASP LEU ASN LEU ASP VAL CYS SER LYS \ SEQRES 4 A 70 CYS HIS PRO PHE PHE THR GLY LYS GLN ARG ASP VAL ALA \ SEQRES 5 A 70 THR GLY GLY ARG VAL ASP ARG PHE ASN LYS ARG PHE ASN \ SEQRES 6 A 70 ILE PRO GLY SER LYS \ CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 1 \ ORIGX1 1.000000 0.000000 0.000000 0.00000 \ ORIGX2 0.000000 1.000000 0.000000 0.00000 \ ORIGX3 0.000000 0.000000 1.000000 0.00000 \ SCALE1 1.000000 0.000000 0.000000 0.00000 \ SCALE2 0.000000 1.000000 0.000000 0.00000 \ SCALE3 0.000000 0.000000 1.000000 0.00000 \ TER 115 PRO M 114 \ ATOM 116 CA ALA F 1 -72.646 -81.473 -22.954 1.00154.90 C \ ATOM 117 CA LYS F 2 -76.122 -79.991 -23.495 1.00 84.17 C \ ATOM 118 CA LEU F 3 -75.206 -77.281 -25.989 1.00 83.28 C \ ATOM 119 CA HIS F 4 -72.290 -79.548 -26.888 1.00109.00 C \ ATOM 120 CA ASP F 5 -74.619 -82.142 -28.415 1.00127.42 C \ ATOM 121 CA TYR F 6 -76.288 -79.450 -30.528 1.00 82.45 C \ ATOM 122 CA TYR F 7 -72.907 -78.880 -32.181 1.00 83.95 C \ ATOM 123 CA LYS F 8 -72.444 -82.429 -33.455 1.00143.45 C \ ATOM 124 CA ASP F 9 -76.232 -82.313 -33.894 1.00174.35 C \ ATOM 125 CA GLU F 10 -77.966 -79.765 -36.128 1.00149.76 C \ ATOM 126 CA VAL F 11 -74.801 -77.667 -36.092 1.00109.54 C \ ATOM 127 CA VAL F 12 -71.836 -78.948 -38.121 1.00121.21 C \ ATOM 128 CA LYS F 13 -74.048 -80.235 -40.948 1.00116.22 C \ ATOM 129 CA LYS F 14 -75.213 -76.645 -41.333 1.00147.17 C \ ATOM 130 CA LEU F 15 -71.657 -75.289 -41.304 1.00 95.82 C \ ATOM 131 CA MET F 16 -70.702 -78.318 -43.395 1.00 77.91 C \ ATOM 132 CA THR F 17 -72.964 -77.320 -46.273 1.00 81.20 C \ ATOM 133 CA GLU F 18 -72.118 -73.707 -45.421 1.00147.83 C \ ATOM 134 CA PHE F 19 -68.942 -74.170 -47.465 1.00132.52 C \ ATOM 135 CA ASN F 20 -68.902 -77.887 -48.307 1.00167.82 C \ ATOM 136 CA TYR F 21 -66.073 -78.508 -45.840 1.00119.83 C \ ATOM 137 CA ASN F 22 -63.853 -81.257 -47.254 1.00147.64 C \ ATOM 138 CA SER F 23 -63.983 -83.170 -43.965 1.00134.13 C \ ATOM 139 CA VAL F 24 -65.943 -83.474 -40.724 1.00116.80 C \ ATOM 140 CA MET F 25 -62.760 -81.935 -39.339 1.00 88.26 C \ ATOM 141 CA GLN F 26 -62.594 -78.758 -41.423 1.00139.81 C \ ATOM 142 CA VAL F 27 -65.538 -77.812 -39.211 1.00 57.46 C \ ATOM 143 CA PRO F 28 -64.529 -74.895 -36.915 1.00 75.74 C \ ATOM 144 CA ARG F 29 -64.889 -76.251 -33.377 1.00 79.52 C \ ATOM 145 CA VAL F 30 -65.573 -74.015 -30.373 1.00106.21 C \ ATOM 146 CA GLU F 31 -62.325 -74.084 -28.408 1.00132.54 C \ ATOM 147 CA LYS F 32 -62.404 -72.883 -24.802 1.00 81.19 C \ ATOM 148 CA ILE F 33 -63.805 -69.623 -23.447 1.00122.20 C \ ATOM 149 CA THR F 34 -61.124 -67.700 -21.556 1.00110.53 C \ ATOM 150 CA LEU F 35 -62.362 -64.997 -19.169 1.00110.75 C \ ATOM 151 CA ASN F 36 -59.863 -62.764 -17.351 1.00104.53 C \ ATOM 152 CA MET F 37 -61.240 -59.844 -15.331 1.00102.81 C \ ATOM 153 CA GLY F 38 -58.453 -57.282 -15.127 1.00142.50 C \ ATOM 154 CA VAL F 39 -57.631 -56.743 -11.457 1.00134.99 C \ ATOM 155 CA GLY F 40 -56.426 -53.156 -11.763 1.00 85.19 C \ ATOM 156 CA GLU F 41 -54.501 -51.197 -9.137 1.00154.83 C \ ATOM 157 CA ALA F 42 -54.415 -54.098 -6.665 1.00 95.15 C \ ATOM 158 CA ILE F 43 -51.462 -52.491 -4.875 1.00111.65 C \ ATOM 159 CA ALA F 44 -54.011 -50.206 -3.211 1.00153.28 C \ ATOM 160 CA ASP F 45 -55.715 -53.007 -1.289 1.00154.75 C \ ATOM 161 CA LYS F 46 -54.574 -56.379 -2.630 1.00137.11 C \ ATOM 162 CA LYS F 47 -57.789 -57.590 -1.027 1.00146.58 C \ ATOM 163 CA LEU F 48 -60.647 -56.763 -3.394 1.00164.76 C \ ATOM 164 CA LEU F 49 -58.831 -58.939 -5.923 1.00113.50 C \ ATOM 165 CA ASP F 50 -58.884 -62.046 -3.749 1.00101.49 C \ ATOM 166 CA ASN F 51 -62.593 -61.226 -3.825 1.00128.26 C \ ATOM 167 CA ALA F 52 -62.710 -60.337 -7.519 1.00 77.20 C \ ATOM 168 CA ALA F 53 -61.114 -63.755 -7.917 1.00118.84 C \ ATOM 169 CA ALA F 54 -63.798 -65.460 -5.842 1.00124.91 C \ ATOM 170 CA ASP F 55 -66.124 -63.502 -8.124 1.00 97.78 C \ ATOM 171 CA LEU F 56 -64.456 -64.894 -11.230 1.00 91.41 C \ ATOM 172 CA ALA F 57 -64.929 -68.304 -9.624 1.00101.16 C \ ATOM 173 CA ALA F 58 -68.592 -67.431 -9.076 1.00 78.50 C \ ATOM 174 CA ILE F 59 -69.160 -68.032 -12.782 1.00 70.78 C \ ATOM 175 CA SER F 60 -66.629 -70.641 -13.886 1.00123.79 C \ ATOM 176 CA GLY F 61 -66.441 -73.373 -11.263 1.00159.70 C \ ATOM 177 CA GLN F 62 -62.718 -73.762 -11.915 1.00140.07 C \ ATOM 178 CA LYS F 63 -60.461 -71.960 -9.436 1.00 67.12 C \ ATOM 179 CA PRO F 64 -59.215 -68.536 -10.633 1.00106.45 C \ ATOM 180 CA LEU F 65 -55.579 -68.119 -11.682 1.00 82.15 C \ ATOM 181 CA ILE F 66 -54.336 -64.897 -10.087 1.00102.44 C \ ATOM 182 CA THR F 67 -52.213 -63.513 -12.927 1.00 49.19 C \ ATOM 183 CA LYS F 68 -48.982 -61.842 -11.834 1.00102.66 C \ ATOM 184 CA ALA F 69 -47.495 -58.794 -13.541 1.00 98.52 C \ ATOM 185 CA ARG F 70 -44.742 -59.287 -16.106 1.00108.39 C \ ATOM 186 CA LYS F 71 -42.409 -56.845 -17.869 1.00108.47 C \ ATOM 187 CA SER F 72 -42.603 -54.607 -14.777 1.00 74.13 C \ ATOM 188 CA VAL F 73 -42.464 -51.630 -17.145 1.00158.42 C \ ATOM 189 CA ALA F 74 -45.482 -49.817 -15.748 1.00106.45 C \ ATOM 190 CA GLY F 75 -46.178 -46.131 -15.335 1.00138.59 C \ ATOM 191 CA PHE F 76 -49.122 -47.694 -13.551 1.00103.33 C \ ATOM 192 CA LYS F 77 -46.925 -49.658 -11.136 1.00113.52 C \ ATOM 193 CA ILE F 78 -46.012 -53.314 -11.753 1.00151.46 C \ ATOM 194 CA ARG F 79 -42.781 -54.567 -10.174 1.00165.79 C \ ATOM 195 CA GLN F 80 -42.300 -57.688 -12.308 1.00111.24 C \ ATOM 196 CA GLY F 81 -44.054 -59.803 -9.682 1.00 89.48 C \ ATOM 197 CA TYR F 82 -47.123 -58.482 -7.852 1.00180.00 C \ ATOM 198 CA PRO F 83 -50.741 -59.756 -8.350 1.00 62.20 C \ ATOM 199 CA ILE F 84 -52.942 -58.393 -11.158 1.00101.39 C \ ATOM 200 CA GLY F 85 -55.448 -60.866 -12.583 1.00 87.75 C \ ATOM 201 CA CYS F 86 -57.593 -63.989 -12.799 1.00120.21 C \ ATOM 202 CA LYS F 87 -58.127 -65.529 -16.250 1.00171.24 C \ ATOM 203 CA VAL F 88 -59.410 -69.125 -16.046 1.00 56.48 C \ ATOM 204 CA THR F 89 -59.852 -70.701 -19.482 1.00 81.89 C \ ATOM 205 CA LEU F 90 -62.839 -72.968 -20.107 1.00 89.61 C \ ATOM 206 CA ARG F 91 -62.605 -76.704 -20.708 1.00153.43 C \ ATOM 207 CA GLY F 92 -64.994 -78.998 -22.581 1.00 96.80 C \ ATOM 208 CA GLU F 93 -67.904 -79.712 -20.234 1.00140.15 C \ ATOM 209 CA ARG F 94 -67.476 -76.465 -18.294 1.00137.39 C \ ATOM 210 CA MET F 95 -66.702 -74.845 -21.648 1.00 83.85 C \ ATOM 211 CA TRP F 96 -70.227 -75.598 -22.881 1.00108.45 C \ ATOM 212 CA GLU F 97 -72.059 -75.665 -19.549 1.00136.54 C \ ATOM 213 CA PHE F 98 -70.869 -72.072 -19.227 1.00 66.55 C \ ATOM 214 CA PHE F 99 -71.779 -71.568 -22.877 1.00 71.29 C \ ATOM 215 CA GLU F 100 -75.187 -72.568 -21.532 1.00144.07 C \ ATOM 216 CA ARG F 101 -74.885 -70.067 -18.678 1.00171.20 C \ ATOM 217 CA LEU F 102 -74.701 -67.099 -21.041 1.00108.65 C \ ATOM 218 CA ILE F 103 -76.073 -66.507 -24.556 1.00113.31 C \ ATOM 219 CA THR F 104 -79.256 -67.582 -22.770 1.00108.62 C \ ATOM 220 CA ILE F 105 -79.468 -66.205 -19.220 1.00 77.68 C \ ATOM 221 CA ALA F 106 -76.516 -63.800 -19.041 1.00 93.92 C \ ATOM 222 CA VAL F 107 -76.258 -61.962 -22.346 1.00 95.38 C \ ATOM 223 CA PRO F 108 -80.089 -61.855 -22.287 1.00111.33 C \ ATOM 224 CA ARG F 109 -79.902 -60.594 -18.697 1.00154.05 C \ ATOM 225 CA ILE F 110 -78.901 -57.379 -20.451 1.00133.81 C \ ATOM 226 CA ARG F 111 -78.641 -53.817 -19.162 1.00180.00 C \ ATOM 227 CA ASP F 112 -79.691 -52.231 -22.455 1.00180.00 C \ ATOM 228 CA PHE F 113 -78.365 -54.472 -25.238 1.00180.00 C \ ATOM 229 CA ARG F 114 -79.593 -53.327 -28.646 1.00180.00 C \ ATOM 230 CA GLY F 115 -77.253 -55.561 -30.620 1.00135.49 C \ ATOM 231 CA LEU F 116 -74.002 -57.275 -29.667 1.00139.47 C \ ATOM 232 CA SER F 117 -71.161 -56.049 -31.873 1.00 86.21 C \ ATOM 233 CA ALA F 118 -70.443 -58.861 -34.331 1.00 84.67 C \ ATOM 234 CA LYS F 119 -67.027 -57.228 -34.625 1.00124.16 C \ ATOM 235 CA SER F 120 -64.285 -59.283 -32.968 1.00128.86 C \ ATOM 236 CA PHE F 121 -62.780 -60.916 -36.053 1.00105.52 C \ ATOM 237 CA ASP F 122 -59.083 -61.771 -36.328 1.00 93.00 C \ ATOM 238 CA GLY F 123 -57.952 -64.843 -38.244 1.00100.37 C \ ATOM 239 CA ARG F 124 -59.151 -67.883 -36.316 1.00164.69 C \ ATOM 240 CA GLY F 125 -62.762 -67.185 -35.386 1.00109.88 C \ ATOM 241 CA ASN F 126 -61.124 -65.570 -32.367 1.00 95.65 C \ ATOM 242 CA TYR F 127 -63.940 -63.701 -30.633 1.00 91.93 C \ ATOM 243 CA SER F 128 -63.471 -61.872 -27.340 1.00 89.45 C \ ATOM 244 CA MET F 129 -65.872 -59.611 -25.457 1.00103.36 C \ ATOM 245 CA GLY F 130 -65.972 -57.560 -22.284 1.00 96.39 C \ ATOM 246 CA VAL F 131 -69.074 -57.620 -20.097 1.00 94.81 C \ ATOM 247 CA ARG F 132 -68.366 -54.127 -18.739 1.00140.74 C \ ATOM 248 CA GLU F 133 -70.037 -55.206 -15.500 1.00113.45 C \ ATOM 249 CA GLN F 134 -70.764 -58.297 -13.425 1.00125.05 C \ ATOM 250 CA ILE F 135 -74.165 -59.062 -14.960 1.00115.24 C \ ATOM 251 CA ILE F 136 -75.007 -60.301 -11.464 1.00153.56 C \ ATOM 252 CA PHE F 137 -75.273 -63.793 -12.936 1.00115.10 C \ ATOM 253 CA PRO F 138 -75.738 -66.521 -10.255 1.00131.49 C \ ATOM 254 CA GLU F 139 -73.097 -65.233 -7.832 1.00135.60 C \ ATOM 255 CA ILE F 140 -74.007 -65.586 -4.141 1.00151.33 C \ ATOM 256 CA ASP F 141 -76.846 -63.469 -2.738 1.00160.14 C \ ATOM 257 CA TYR F 142 -75.665 -60.927 -5.304 1.00180.00 C \ ATOM 258 CA ASP F 143 -76.559 -57.691 -3.527 1.00180.00 C \ ATOM 259 CA LYS F 144 -73.845 -56.888 -0.976 1.00170.74 C \ ATOM 260 CA VAL F 145 -71.163 -57.550 -3.591 1.00 94.08 C \ ATOM 261 CA ASP F 146 -68.435 -55.056 -4.487 1.00133.18 C \ ATOM 262 CA ARG F 147 -68.070 -51.983 -6.705 1.00145.27 C \ ATOM 263 CA VAL F 148 -68.666 -52.962 -10.347 1.00136.76 C \ ATOM 264 CA ARG F 149 -66.539 -55.807 -11.749 1.00143.46 C \ ATOM 265 CA GLY F 150 -66.769 -56.801 -15.396 1.00106.29 C \ ATOM 266 CA LEU F 151 -64.319 -59.043 -17.240 1.00 53.03 C \ ATOM 267 CA ASP F 152 -63.313 -60.501 -20.611 1.00 86.68 C \ ATOM 268 CA ILE F 153 -64.573 -63.463 -22.635 1.00 74.91 C \ ATOM 269 CA THR F 154 -62.647 -64.979 -25.550 1.00112.69 C \ ATOM 270 CA ILE F 155 -63.866 -67.931 -27.636 1.00 73.99 C \ ATOM 271 CA THR F 156 -60.731 -68.958 -29.539 1.00 78.88 C \ ATOM 272 CA THR F 157 -62.487 -71.312 -31.971 1.00 93.92 C \ ATOM 273 CA THR F 158 -60.574 -73.606 -34.332 1.00 87.25 C \ ATOM 274 CA ALA F 159 -62.102 -71.514 -37.119 1.00 76.50 C \ ATOM 275 CA LYS F 160 -59.697 -71.327 -40.057 1.00 90.21 C \ ATOM 276 CA SER F 161 -60.490 -67.614 -40.075 1.00130.80 C \ ATOM 277 CA ASP F 162 -63.050 -65.046 -38.966 1.00102.83 C \ ATOM 278 CA GLU F 163 -64.233 -65.689 -42.525 1.00180.00 C \ ATOM 279 CA GLU F 164 -65.827 -68.694 -40.838 1.00 78.68 C \ ATOM 280 CA GLY F 165 -65.784 -67.684 -37.193 1.00 89.77 C \ ATOM 281 CA ARG F 166 -68.900 -65.577 -37.669 1.00111.12 C \ ATOM 282 CA ALA F 167 -70.641 -68.550 -39.288 1.00103.18 C \ ATOM 283 CA LEU F 168 -69.998 -70.840 -36.325 1.00 61.47 C \ ATOM 284 CA LEU F 169 -71.116 -69.644 -32.884 1.00125.79 C \ ATOM 285 CA ALA F 170 -74.108 -68.422 -34.886 1.00105.30 C \ ATOM 286 CA ALA F 171 -75.261 -72.040 -35.142 1.00 90.47 C \ ATOM 287 CA PHE F 172 -76.463 -71.203 -31.643 1.00 96.29 C \ ATOM 288 CA ASP F 173 -78.576 -68.105 -31.018 1.00165.05 C \ ATOM 289 CA PHE F 174 -75.596 -65.793 -30.557 1.00100.49 C \ ATOM 290 CA PRO F 175 -76.899 -62.300 -29.645 1.00120.48 C \ ATOM 291 CA PHE F 176 -74.987 -60.275 -32.248 1.00114.92 C \ ATOM 292 CA ARG F 177 -76.919 -57.786 -34.389 1.00140.66 C \ ATOM 293 CA LYS F 178 -78.014 -56.986 -37.944 1.00179.54 C \ TER 294 LYS F 178 \ TER 365 LYS A 70 \ MASTER 120 0 0 0 0 0 0 6 362 3 0 30 \ END \ \ ""","3iyxF1") cmd.hide("everything") cmd.color("grey70") rebuild cmd.select("rainbow","resi 45-61 + resi 64-69 + resi 82-88") cmd.spectrum(expression="count", selection="resi 45-61 + resi 64-69 + resi 82-88") set ribbon_trace,1 cmd.as("ribbon") cmd.zoom("3iyxF1",animate=-1) cmd.delete("rainbow")