Protein Domain ID: d1rtra_
Superfamily ID: a.128.1
Number of Sequences: 11
Sequence Length: 277
Structurally conserved residues: 204

Alignment with gaps in target domain
Show alignments without gaps


Helix | Strand | Loop | SCR


                                 1           11            21                   31                   41          51               61         71        81                    91       101          111       121          131       141       151         161              171          181           191                  201           211       221                                                                    231                                           241       251                              261             271                                                                                                                                               
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1136 778888889999988 8 5 323234 5699 8757 87*8 9*** 9999 8789665444 4799 ******************** ** 7798 6 4444444444444 447767 79999************8 43 55467**98*********119****9999**** 7 88 8***********9 9 88* ***999**9 8 **** 9 9 7788 89 ***** ***********9*9999 5 4 11 8999*** ******************** * 99 9 546 6 8899 99999 888 7 4
d1rtra_: ------------------------TNLP---MNKLIDEVNNELSVA--I--N---------KSVMDT--QLEE----SMLY-----SLNA--GGKR-IRPV-LLLLTLDSLN-------TEYE-LGMKSAIALEMIHTYSLIHD--DL-PAMD------N---DDYRRGKLTNHKV--YGEWTA-ILAGDALLTKAFELISSD-DR--LTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSE--G------QP-IDLETLEMIHKTK-T-GAL-LTFAVMSAA--D--IANV---D-D------TTKE-HL---ESYSY-HLGMMFQIKDDLLDCYG------------------------D-------------E------------AK------------STYVSLL------------------------------------GKDGAEDKLTYHRDAAVDEL---T-QI------D-------------EQF---N--TKHL-LEIVD--------------------------------------------------------LFY-----S-----------------------R-------------------------------------------------------------
d1fpsa_: -
-----------------------spvV---VEREREEFVGFFPQI--V--RdltedgighpeVGDAvaRLKE----VLQY-----NAP---GGKC-NRGL-TVVAAYRELSgpgqkdaeSLR-CALAVGWCIELFQAFFLVAD--DI---MD------Q---SLTRRGQLCWYKKegVGLD-A-INDSFLLESSVYRVLKKY--C--RQRPYYVHLLELFLQTAY--QTELGQMLDLITA--PvskvdlSH-FSEERYKAIVKYK-T-AFYsFYLPVAAAM--Y--MVGId--S-K------EEHE-NA---KAILL-EMGEYFQIQDDYLDCFG------------------------D-------------Paltgkvgtdiqdnk------------CSWLVVQclqrvtpeqrqllednygrkepekvakvkelyeavgMRAAFQQYEESSYRRLQELI---EkHS------N-------------R-L---P--KEIF-LGLAQ--------------------------------------------------------KIY-----K-----------------------Rqk-----------------------------------------------------------
d1rqja_: m
d----------------------fpQQ---LEACVKQANQALSRF--IapL---------PFQ-NT--PVVE----TMQY-----GALL--GGKR-LRPF-LVYATGHMFG-------VSTN-TLDAPAAAVECIHAYSLIHD--DL-PAMD------D---DDLRRGLPTCHVK--FGEANA-ILAGDALQTLAFSILSDA-DMpeVSDRDRISMISELASASGIAGMCGGQALDLDAE--G------KH-VPLDALERIHRHK-T-GAL-IRAAVRLGA--L--SAGD---KgR------RALP-VL---DKYAE-SIGLAFQVQDDILDVVG------------------------Dtatlgkrqgadqql------------gk------------STYPALL------------------------------------GLEQARKKARDLIDDARQSL---K-QLa-----E-------------QSL---D--TSAL-EALAD--------------------------------------------------------YII-----Q-----------------------Rnk-----------------------------------------------------------
d1v4ea_: -
------------------------------NSYELEKVKERIEQIlsQ--F---------FP---E--QIMK----D--L-----PLY----GKM-LRVR-LSILSFKNRG-------VEIGeDAISSLAALELVHLASLLHD--DV---ID------G---ARFRRGKETINFM--YGDKAA-VAAGDLVLVSAFHTVEEI-G--------NNKLRRAFLNVIG--KMSEAELIEQLSR--Y------KP-ITKEEYLRIVEGK-S-GAL-FGLALQLPA--L--LEGE-------------lGE-DL---YNLGV-TIGTIYQMFDDIMDFAG------------------------M-------------E------------KIgkdgfldlkngvASFPLVTamekfpearqmfenrdwsglmsfmrekg--------ILKECEETLKVLVKNVIIEN---S----------------------------------WL-RDF--------------------------------------------------------------------------------------------------------------------------------------------------------
d2q80a1: -
--------------------------------------------------------------ETVQr-ILLE----PYKY-----L-LQ--LPGKqVRTK-LSQAFNHWLK-------VPED-KLQIIIEVTEMLHNASLLID--DI---ED------N---SKLRRGFPVAHSI--YGIPSV-INSANYVYFLGLEKVLTL-D--------HPDAVKLFTRQLL--ELHQGQGLDIYWRdnY------TC-PTEEEYKAMVLQK-T-GGL-FGLAVGLMQ--L--FSDY---K-E-----------DL---KPLLN-TLGLFFQIRDDYANLHSksfcedl-----------------t-------------e------------gk------------FSFPTIHaiwsrpestqvqnilrqrtenidikkycvhyledvgSFEYTRNTLKELEAKAYKQI---D-AR------G-------------------G--NPEL-VALVK--------------------------------------------------------HLS-----K-----------------------Mfk-----------------------------------------------------------
d1ezfa_: -
-----------------------------------nslKTCYK------------------------------------------YLNQt-SRSF-----------aaviq-------alDG-EMRNAVCIFYLVLRALDTLE--DDmTISVekkvpll---hnfhsflyqpdwr--fmESKEkdRQVLEDFPTISLEFRNL----------AEKYQTVIADICR--RMGIGMAEFLDKH----------v-TSEQEWDKYCHYV-A-GLV-GIGLSRLFS--A--SEFE---D-P------LVGE--D---TERAN-SMGLFLQKTNIIRDYLEdqqggrefwpqevwsryvkklgdfa-------------k------------pe------------nidlAVQ------------------------------------CLNELITNALHHIPDVITYL---S-RL------R-------------nqs---v--FNFC-AIPQV--------------------------------------------------------MAI-----A-----------------------Tlaacynnqqvfkgavkidatnmpavkaiiyqymeeiyhripdsdpsssktrqiistirtqn
d5easa2: k
nnvllrfakldfnl---------lqmL---HKQELAQVSRWWKDL--D---------------------fVT----TLpy-----ARDR--VVECyFWAL-G--VYFE----------PQYS-QARVMLVKTISMISIVDDTFdaYG-TVKE------Lea-ytdaiqrwdinei--drLPDY-MKISYKAILDLYKDYEKE--l--SSAGRSHI-VCHAIERMK--EVVRNYNVESTWFieG------YT-PPVSEYLSNALATtT-YYY-LATTSYLG------MKSA---T-E------QDFE-WLsknPKILE-ASVIICRVIDDTATYEVeks---------------------r-------------g------------qi------------ATGIECCmrdygistke--------------------------AMAKFQNMAETAWKDINEGLlrpT-PV------S--------------tE---F--LTPI-LNLAR--------------------------------------------------------IVE-----Vtyivlkphiinllvdsik-----i-------------------------------------------------------------
d1n1ba2: m
nplifelaklnfni---------iqat---hqQELKDLSRWWSRL--C---------------------fPE----KLpf-----vrDR--LVESfFWAV-GMFE-----p-------hQHG-YQRKMAATIIVLATVIDDIYd-VY-GTLD------Elelftdtfkrwdtesi--trLPYY-MQLCYWGVHNYISDAAYD-il--KEHGFFC--LQYLRKSVV--DLVEAYFHEAKWYhsG------YT-PSLDEYLNIAKIS-VaSPA-IIS---PTY--F--TFAN---A-Shdtavidsly-qy---HDILC-LAGIILRLPDDLG-------------------------------------------------------dv------------PKTIQCYmketnaseee--------------------------AVEHVKFLIREAWKDMNTAI---A-AG------Ypf-----------pdg---m--vaga-aniGR--------------------------------------------------------VAQ-----Fiylhgdgfsktyehiagllfepya-------------------------------------------------------------
d1di1a_: t
ppptqwsyl--------------chPR---VKEVQDEVDGYFLEN--W--K-----------------fPSF----KAVR-----TFLD--AKFS-EVTC-lyFPLA------------LDD-RIHFACRLLTVLFLIDDVLE--HM-SF------------adgeaynnrlipi--srgdvl-pdrtkPEEFILYDLWESMrAH--DA-ELANEVLEPTFVFMR---AQTD----RARL---------SI-HELGHYLEYREK----DVG-KALLSALMR--FsmGLRL---S-A------DELQ-DM---KALEA-NCAKQLSVVNDIYSYDK------------------------E-------------Ee-----------al------------CSAVKVLaeesklgipa--------------------------TKRVLWSMTREWETVHDEIV---A-EKiaspdgC-------------SEAakay--MKGL-EYQMS--------------------------------------------------------GNE-----Qwsktt------------------r-------------------------------------------------------------
d1ps1a_: q
dvdfhip----------------lpgR---QSPDHARAEAEQLAW--P---------------------rSL----GLIRsdaaaerHL--RGGYaDLASrFYPH--------------aTG-ADLDLGVDLMSWFFLFDDLF--DG-PRGEnpe---d---tkqltdqvaaald--gplpdt-APPIAHGFADIWRRTCE---------GMTPAWCARSARHWR--NYFDGYVDEAESR-------------SAAQYLAMRRHT-I---G-VQPTVDLAErag--RFEV---PhR------VFDSaVM---SAMLQ-IAVDVNLLLNDIASLEKeea---------------------r-------------g------------eq------------NNMVMILrrehgwsksr--------------------------SVSHMQNEVRARLEQYLLLE---S-CL------PkvgeiyqldtaerEAL---EryRTDAvRTVIR--------------------------------------------------------GSYdwhrss-----------------------g-------------------------------------------------------------
d1kiya_: m
enfpteyflnttvrlleyiryrdSNYTreeRIENLHYAYNKAAHH--F--A---------Q-------PRQQqllkvdpK-----RLQAslQTIVgMVVY-SWAK------------------VSKECMADLSIHYTYTLVLE--DS-KDD------------pyptmvnyfddl--qagreq-aHPWWALVNEHFPNVLR---------hFGPFCSLNLIRSTL--DFFEGCWIEQYNF--G------GFpgSHDYPQFLRRMN-G---L-GHCVGASLW--Pk-EQFNersL-F------LEIT-SA---IAQMEnWMVWVNDLMSF-YKEFD------------------------D-------------Erd----------qi------------sLVKNYVvsdeis------------------------------LHEALEKLTQDTLHSSKQMV---A-VF------S-------------DKD---PqvMDTI-ECFMHgyvtwhlcdrryrlseiyekvkeektedaqkfckfyeqaanvgavspsewayppvaqla-----n-----------------------v-------------------------------------------------------------