Protein Domain ID: d3prna_
Superfamily ID: f.4.3
Number of Sequences: 11
Sequence Length: 289
Structurally conserved residues: 186

Alignment with gaps in target domain
Show alignments without gaps


Helix | Strand | Loop | SCR


                                                                                                                                                                                                                                                                                            1                                          11                        21                                                                                                                                                       31         41            51                                                                 61                                                                                                                                                                                                                71                         81        91       101          111                 121                                  131                   141                                                      151                                    161        171             181                                                                          191       201                    211                                                                                           221       231                 241                                               251       261              271                                                                      281                                                                                                                                                                                                                                                                                                                                                     
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688889 88766666655 4433 4467 777 7 8 78999999 88755 67888899999 66 66 3 667 7 6769 8 88889** * ****98885553332332355552213555 323333 34443002222 22232378****** ** * ********** 8 6 44 33 24789 ********** * * **********3 4777 * ************9* 7 ************ * 6 88 9*********** * 9******** 9999 9999 9**********9 7 78******* 9 889 899*** 99 8 9988
d3prna_: -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MISLNG----------------------------------YGRFGLQYVED----------------RGVG----------------------------------------------------------------------------------------------------------LEDT-------------IIS-------------------S-R----LRINIVGT-TETDQ----GVTFGAKLRMQ------------------------------------------WD-DG----------D----AFA--G------------------------------TAGN-------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----AQFWTSY-----N------------GVTVSVGNVDTAFDSVALTYDSEMGYEWSS---FGDAQS----------SFFAYNSKYDA---------------------------SGALDNYNGIAVTY-SI-----S------GVNLYLSYVD-----------------------------------------------P-------------D-------------QT-VD--SSLVT-EEFGIAADWS-N--D---MISLAAAYTTD----------------AGGI------------------------------------V---------------DNDIAFVGAAYKFN------D-------AGTVGLNWYDNG-------------L-------------------S----------------------TA------------------------------GDQVTLYGNYAF-----G-----ATTVRAYVS----------DIDR-----------------------------AGAD-TAYGIGADYQFA----E---GVKVSGSVQ----------------S------------------GFA-----------------------------NETVAD---------------------------------------------------------------VG-------------------------------------------------------V---------------------------------------------------------------------------RFDF------------------------------------------------------------------------------------------------------------------------------------------------------
d2zfga1: a
eiynkdgn--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVDLYG----------------------------------KAVGLHYFSKG----------------GEns----------------------------------------------------------------------------------------------------------ygGN-------------GDM-------------------T-Y----ARLGFKGE-TQINS----DLTGYGQWEYN------------------------------------------FQ-GN----------NsegaDAQ--Tg-----------------------------NKTR-------------------------------------------------------------------------------------------------------------------------------------------------------------------L-----AFAGLKYa----D------------VGSFDYGRNYGVVY-DALGYTDMLP--EFG---G-DTAYsd--------DFFV-------------------------------------grvGGVATYRN-SNffglvD------GLNFAVQYLG-----------------------------------------------K-------------N-------------ERdta--rrsnG-DGVGGSISYE-Y--E---GFGIVGAYGA------------------ADR------------------------------------Tnlqeaqplgngk---KAEQWATGLKYD-A------N-------NIYLAANYGETR-------------Natpitnkftntsgf-----A----------------------NK------------------------------TQDVLLVAQYQF-----Df----GLRPSIAYT----------KSKAkdvegig----------------------DVDLvNYFEVGATYYFN----K---NMSTYVDYI----------------I------------------NQIdsdnklgvg--------------------SDDTVA---------------------------------------------------------------VG-------------------------------------------------------I---------------------------------------------------------------------------VYQF------------------------------------------------------------------------------------------------------------------------------------------------------
d2pora_: -
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVKLSG----------------------------------DARMGVMYNGD--------------------------------------------------------------------------------------------------------------------------------DW-------------NFS-------------------S-R----SRVLFTMS-GTTDS----GLEFGASFKAH--------------------------------------------------------------------------------------------------eSVG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AetgedGTVFLSG-----A------------FGKIEMGDALGASEALF-GDLYEVGYTDLDdrgGNDIPY----------LTGDE---------------------------------rltAEDNPVLLYTY-SA-----G------AFSVAASMSD-----------------------------------------------Gk------------V-------------GE-TS--E-DDA-QEMAVAAAYT-F--G---NYTVGLGYEKIdspd------------talm------------------------------------A---------------DMEQLELAAIAKFG--------------ATNVKAYYADGE-------------Ldrdfaravfdltpvaaaata----------------------vd------------------------------HKAYGLSVDSTF-----G-----ATTVGGYVQ----------VLDIdt---------------------------IDDV-TYYGLGASYDLG----G---GASIVGGIA----------------D------------------NDLpn---------------------------SDMVAD---------------------------------------------------------------LG-------------------------------------------------------V---------------------------------------------------------------------------KFKF------------------------------------------------------------------------------------------------------------------------------------------------------
d2fgqx1: -
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVTLFG----------------------------------IVDTNVAYVNK----------------DAAG----------------------------------------------------------------------------------------------------------DSRY-------------GLG-------------------T-SgastSRLGLRGT-EDLGG----GLKAGFWLEGE------------------------------------------IFgDD----------G----NAS--G------------------------------FNFKr------------------------------------------------------------------------------------------------------------------------------------------------------------------R-----STVSLSG-----N------------FGEVRLGRDLVPTSQKLTSYDLFsatGIGP----FMGFRnwaagqgaddNGIRA---------------------------------------NNLISYYT-PN-----Fg-----GFNAGFGYAF-----------------------------------------------D---------------------------EK-QTigtADSVgRYIGGYVAYD-N--G---PLSASLGLAQ------------------QKT------------------------------------Avgglat---------DRDEITLGASYNFG--------------VAKLSGLLQQTK-------------Fkrdigg-------------d----------------------IK------------------------------TNSYMLGASAPVg----G-----VGEVKLQYA----------LYDQkai--------------------------DSKA-HQITLGYVHNLS----K---RTALYGNLA----------------F------------------LKNkdastlglqakgvyaggvqage-------SQTGVQ---------------------------------------------------------------VG-------------------------------------------------------I---------------------------------------------------------------------------RHAF------------------------------------------------------------------------------------------------------------------------------------------------------
d2mpra_: -
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDFHG----------------------------------YARSG--igwt----------------gsgg----------------------------------------------------------------------------------------------------------EQQCfqatgaqskyrlgNEC-------------------EtY----AELKLGQEvWKEG-----DKSFYFDTNVA------------------------------------------YS-VNqqnd------w----EST--D------------------------------PAFR-------------------------------------------------------------------------------------------------------------------------------------------------------------------E-----ANVQGKNliewlP------------GSTIWAGKRFY------qrHDVH----MID---F---yy----------wDISG----------------------------------------PGAGIENiDL-----G------FGKLSLAATRsteaggsytfssq----------------------------------n-------------i-------------yd-ev--kdtan-DVFDVRLAGL-QtnP---DGVLELGVDYG--------------------------------------------------------RanttdgykladgaskDGWMFTAEHTQSML--------------KGYNKFVVQYATda-----------M-------------------T----------------------TQgkgqargsdgsssftekinyankvinnngnMWRILDHGAISL-----Gd----kWDLMYVGM----------YQNIdwdnnl-----------------------GTEW-WTVGVRPMYKWT----p---imSTLLEVG----------------Y------------------DNVksqqtgdrn--------------------NQYKITlaqqwqagdsiwsrpairifatyakwdekwgyikdgdnisryaaatnsgistnsrgdsdewtfga-------------------------------------------------------q---------------------------------------------------------------------------MEIWw-----------------------------------------------------------------------------------------------------------------------------------------------------
d1a0tp_: s
gf--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFHGYA----------------------------------RSG-----vim----------------ndSG----------------------------------------------------------------------------------------------------------AS-T-------------KSGayitpagetggaigrlgnqA-D----TYVEMNLE-HKQTLdngaTTRFKVMVADG------------------------------------------QT-SY----------N----DWTasT------------------------------SDLN-------------------------------------------------------------------------------------------------------------------------------------------------------------------V-----RQAFVEL-----GnlptfagpfkgsTLWAG--KRFD-----rdnFDIH---WIDS-----------------------------------------------------------dvvflaGTGGGI-YD-----VkwndglRSNFSLYGRN-----------------------------------------------F-------------G-------------DI-DD--SSNSV-QNYILTMNHF-A--G---PLQMMVSGLR------------------AKD------------------------------------NderkdsngnlakgdaANTGVHALLGLHND------SfyglrdgSSKTALLYGHGLgaevkgigsdgalR-------------------P----------------------GA-------------------------------DTWRIASYGTT-----PlsenwSVAPAMLAQ----------RSKDryad-------------------------GDSY-QWATFNLRLIQAinqnf---alAYEGSYQ----------------Y------------------MDLkpegyndrqav------------------NGSFYK---------------------------------------------------------------LTfaptfkvgsigdffsrpeirfytswmdwskklnnyasddalgsdgfnsggewsfgv---------------------------------------------------------------------------QMETwf----------------------------------------------------------------------------------------------------------------------------------------------------
d1by5a_: q
esawgpaatiaarqsatgtktdtpiqkvpqsisvvtaeemalhqpksvkealsytpgvsvgtrgasntydhliirgfaaegqsqnnylnglklqgnfyndavidpymleraeimrgpvsvlygksspggllnmvskrptteplkevqfkagtdslfqtgfdfsdsldddgvysyrltglarsanaqqkgseeqryaiapaftwrpddktnftflsyfqnepetgyygwlpkegtveplpngkrlptdfnegaknntysrnekmvgysfdhefndTFTVRQnlrfaenktsqnsvygygvcsdpanayskqcaalapadkghylar----------------kyvv----------------------------------------------------------------------------------------------------------ddek-------------lqn-------------------f-s----vDTQLQSK-FAT-G----DIDHTLLTGVDfmrmrndinawfgyddsvpllnlynpvntdfdfnakdpansgpy-ri----------l----nkq--k------------------------------qtgV-------------------------------------------------------------------------------------------------------------------------------------------------------------------Y-----VQDQAQW-----D------------KVLVTLGG--------------------ry---dwadqe----------slnrvagttdk---------------------------rddkQFTWRGGVNY-LFd----N------GVTPYFSYSE-----------------------------------------------S-------------Fepssqvgkd----gn-if--apSKG-KQYEVGVKYV-PedR---PIVVTGAVYN-----------------LTKTnnlmadpegsffsvegge------------------I---------------RARGVEIEAKRPLS------A-------SVNVVGSYTYTD-------------Aeyttdttykgntpa-----q----------------------vp------------------------------KHMASLWADYTFfdgplS-----GLTLGTGGRytgssygdpansfk-----------------------------vgsy-tVVDALVRYDLArvgmA---GSNVALHVNnlfdreyvascfntygc------------------fwg-----------------------------aerQVV---------------------------------------------------------------AT-------------------------------------------------------A---------------------------------------------------------------------------TFrf------------------------------------------------------------------------------------------------------------------------------------------------------
d1fepa_: d
dtivvtaaeqnlqapgvstitadeirknp-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------vardvs----------------------------------kiirtMPGV------------------NLTGnstsgqrgnnrqidirgmgpentlilidgkpvssrnsvrqgwrgerdtrgdtswvppemierievlrgpaaarygngaaggvvniitkkgsgewhgswdayfnapehkee-------------gat-------------------k-r----tnFSLTGP-LGD--------EFSFRLYGN---------------------------------------------------------l----DKT--QadawdinqghqsaragtyattlpagregvinkdI-------------------------------------------------------------------------------------------------------------------------------------------------------------------N-----GVVRWDFa----P------------LQSLELEA-----------------------------------------------gYSRQgnlyagdtqntnsdsytrskygdetnrLYRQ--NYALTWNG-GWd----N------GVTTSNWVQY-----------------------------------------------E-------------Htrnsripeglagqdf-vd--idLDD-VMLHSEVNLP-I--DflvNQTLTLGTEW-----------------NQQRmkdlssntqadrspysk-------------------A---------------EIFSLFAENNMELT------D-------STIVTPGLRFDH-------------Hsi-----------------v----------------------GN------------------------------NWSPALNISQGL-----Gd----DFTLKMGIA----------RAYKapslyqtnpnyilyskgqgcylqgnddlkAETS-INKEIGLEFKR-----D---GWLAGVTWF----------------R------------------NDYrnkieagyvavgqnavgtdlyqwdnvpkaVVEGLE---------------------------------------------------------------GS-------------------------------------------------------L---------------------------------------------------------------------------NVPVsetvmwtnnitymlksenkttgdrlsiipeytlnstlswqaredlsmqttftwygkqqpkkynykgqpavgpetkeispysivglsatwdvtknvsltggvdnlfdkrlwragnaqttgdlaganyiagagaytynepgrtwymsvnthf
d1kmoa_: a
ltvvgdwlgdarendvfehagardvirredfaktgattmrevlnripgvsapenngtgshdlamnfgirglnprlasrstvlmdgipvpfapygqpqlslapvslgnmdaidvvrgggavrygpqsvggvvnfvtrai----------------------------------------------------------------------------------------------------------------------------------------pQDFGI----------------------------------EAGVEGQLSPT----------------SS------------------------------------------------------------------------------------------------------------QNNP-------------KET-------------------H-N----LMVGGTAD-------------ngfGTALL------------------------------------------YS-GTrgsdwrehsat----riD--D------------------------------LMLKskyapdevhtfnsllqyydgeadmpgglsradydadrwqstrpydrfwgrrklaslgyqfqpdsqhkfniqgfytqtlrsgyleqgkritlsprnywvrgieprysqifmigpsahevgvgyrylnesthemryytatssgqlpsgsspydrdtrsgteahawy-----lddkIDI-----G------------NWTITPG--------------------mrf---ehiesy----------qnnaitgthee---------------------------vsynaPLPALNVLY-HLt----D------SWNLYANTEG-----------------------------------------------Sfgtvqysqigkavq-------------sg-nv--ePEKA-RTWELGTRYD-D--G---ALTAEMGLFLInfnnqydsnqtndtvtargk------------------------------------T---------------RHTGLETQARYDLGtltptlD-------NVSIYASYAYVN-------------Aeirekgdtygnlvp-----F----------------------SP------------------------------KHKGTLGVDYKP-----G-----NWTFNLNSD----------FQSSqfadnantvkesadgstgr----------IPGF-MLWGARVAYDFG----PqmaDLNLAFGVK----------------NifdqdyfirsyddnnkgiyaG-----------------------------QPRTLY---------------------------------------------------------------MQ-------------------------------------------------------G---------------------------------------------------------------------------SLKF------------------------------------------------------------------------------------------------------------------------------------------------------
d2gufa1: s
pdtlvvtanrfeqprstvlapttvvtrqdidrwqstsvndvlrrlpgvditqlssifirgtnashvlvlidgvrlnlagvsgsadlsqfpialvqrveyirgprsavygsdaiggvvniittrdepgteisagwgsnsyqnydvstqqqlgd--------------------------------------------------------------------------------------------------------------------------KTRVTL----------------------------------LG-------------------------dyah----------------------------------------------------------------------------------------------------------thdg-------------fls-------------------k-T----LYGALEHN-FT--------DAWSGFVRGY------------------------------------------GY-DNrtnydt----r----KLY--S------------------------------QS-W-------------------------------------------------------------------------------------------------------------------------------------------------------------------D-----AGLRYNG-----E------------LIKSQLIT-----------------------------------------------sYSHSkdynydphygrydssatlde-------MKQY--TVQWANNV-IV-----G------HGSIGAGVDW-----------------------------------------------Q-------------Kqtttpgtgy----ve-dg--ydqRN-TGIYLTGLQQ-V--G---DFTFEGAARS-----------------DDNSqf----------------------------------G---------------RHGTWQTSAGWEFI------E-------GYRFIASYGTSY-------------Kapnlgqlygfygnpnld--P----------------------EK------------------------------SKQWEGAFEGLT-----A-----GVNWRISGY----------RNDVsdlidyddhtlkyyneg------------KARI-KGVEATANFDTG--------pLTHTVSYD----------------Y------------------VDArnaitdtpllrr-----------------aKQQVK---------------------------------------------------------------YQ-------------------------------------------------------Ldwqlydfdwgityqylgtrydkdyssypyqtvkmggvslwdlavaypvtshltvrgkianlfdkdyagreytlsgsytf------------------------------------------------------------------------------------------------------------------------------------------------------
d1t16a_: a
gfqlnefsssglgraysgegaiaddagnvsrnpali----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tmfdrP----------------------------------TFSAGAVYIDPdvnisgtspsgrslkadnia----------------------------------------------------------------------------------------------------------ptAW-------------VPN-------------------M-H-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------fvapIN-----D------------QFGW-----------------gasitsnyg---latefn----------dtyaggsvggt---------------------------tdletmnlNLSGAY-RL-----Nn-----AWSFGLGFNAvyarakierfagdlgqlvagqimqspagqtqqgqalaatangidsntk-------------i-------------ah-ln--gNQWG-FGWNAGILYElD--K---NNRYALTYRS-----------------EVKIdfkgnyssdlnrafnnyglpiptatggatqsgyltlN---------------LPEMWEVSGYNRVD------P-------QWAIHYSLAYTS-------------W-------------------SqfqqlkatstsgdtlfqkhegfKD------------------------------AYRIALGTTYYY-----Dd----NWTFRTGIA----------FDDSpvpaqnrsisip-----------------DQDR-FWLSAGTTYAFN----K---DASVDVGVS----------------Y------------------MHGqsvkinegpyqfeseg-------------KAWLFG---------------------------------------------------------------TN-------------------------------------------------------F---------------------------------------------------------------------------NYAFhhhhhh------------------------------------------------------------------------------------------------------------------------------------------------