Your job contains 1 sequence.
>000053
MMMEGEANNSRSKKKRAVPYDYGFTDTVFSWSLEDIFNEDLFKDKVKRIPFSFRSVGQYF
ESFVFPLLEETRANLMSGMEKISNAPFAQVVAFEDSKPYGSMLYDVKVDCWRNRFSNLGR
EPYKTLPGDILVLADAKPETASDLQRVGRMWTFVSVANVTEDENEIDTSPTYFKVNATKE
IQIDVSKKSLFVIFLINRTSNRRIWNSLHMKGNLKIIKELLCTDSGATVQLIWGPPGTGK
TKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVERDCRDALFFPLGEILL
LGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVEFLDNCVSQYHTYMENE
SMKQSEDINGDIIKEKECGKEADASDVEIKPFLEFVRERFKCIINGDIIKEKECGKEADA
SDVEIKPFLEFVRERFKCIAAPLRSCIFNFCTHIPKCYIGEDNFHVMATLISLLDSFETL
LFEDNLVSEELEELLSHSVDEDLSESIVDIKYLLHKRRSECHFVLRKLLSSFNELNLPSA
VEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQ
LSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFERLSHLRHSKHLLSIQYRMHPSISF
FPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSV
VMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQG
GEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVD
DAKARQCFFNADDDKDLGKSILEAKKELNELYELLNPGSTLFRSQRWKVNFSDNFLKSFR
KLTSDQTKKLVINLLLKLASGWRPEKRKVDSVCGSSLHIIKQFKVEGFYIICTIDIVKES
KYFQVLKVWDILPLENVQNLLTRLDNIFVKNLEVPKNWATTSNIVRFKGLADNESGSDYS
GAASDGRSYAENSNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMILF
PRSTFILGRSGTGKTTVLIMKLFQKEKLHNMALEGFFGVNNSSQETEAEKDLEKTERVIL
RQLFVTVSPKLCFAVKQHISHMKSSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFIDIP
AKSYPLVITFHKFLMMLDGTLCNSYFERFHNIWKNYGQLQNSKSVFIETIIRKKEVNYER
FSSSYWPHFNAQLARKLDPSRVFTEIISHIKGGLQSIEVVNGKLNREDYVNLSETRNSSL
SRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLKEESYKGDEFHFVYIDEVQDLT
MSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDIRSLFYKKFVLESRNNGNDGRQ
EKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHSVDILKPETSLIYGEPPILLES
GDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIVESKGL
EFQDVLLYKFFSASPLKNQWRVVYEYMKEQDLLDSTSPGSFPSFNEVKHNILCSELKQLY
VAITRTRQRLWIWENKEEFSKPMFDYWKKRFLVQVRRLDDSLAQAMQVASSPEEWKSRGI
KVCEIFKKFIIFVCLWLFYEQNYEMATICFEKAKDTYWEGRSKASGLKAAADRISSSNPL
EARIILREAAKIFEAIGKVDSAAKCFFDMGEYERAGTIYLERCEEPELEKAGECFSLAGC
YKLAADVYARGSFLAECLDVCSKGKLFDIGLQYISYWKQHADTDVGRVKSSKEMKKIEQD
FLQSCALHFHKLNDNKSMMKFVRAFHSMDLIRNFLNSKGCFDELLVLEEESESFMDAANI
ARLRGDILRTVDLLQKVGNFKEACNLTLNYVLSNSLWSSGSKGWPLKQFTQKKELLEKAK
LLAKNESNKFYNFVCTEADILSNDQSDLLIMNQQLNASKRHQSVNGETLSARKILDFHLH
TISSKYVWEDEYVLVEKICNNRISVQTLIYFWNCWKDKIVNVLKYLECLKSQNFNDYRSY
GDFCLNYLGVWRQYNNTNIIYLLLNGDAEWVRDLNNGHALRSGNLASINVHQLVSAGRNY
WSSELFSVGTKVLDNLEALHKQSSENSPSVWCHVLCLAYIYEVAKFLLSSNYSSLQYHAK
VLQKFIDQSTEHLFDFIFPLEWRESLNENMISLKGTKLYRNIIKEVFSKHIGLKGKLSYG
QIGSAVVMILRTGKLGKDVYGRVAKRFDGYTPWKEFVESLSINMGLESYRGSVLQNHDDM
KHASHVWKFYRALCDTYEANWRRVDYITPDCFLYLIERLLILLSSLKGCIVTTKSSFVDW
LIYQEWSTNPTSSLFTDLHQSFGAVYEFIFNIVQQFLYSEKETMEWIKKSCTEIKDYHSL
VVLRLFVIVCLLHLNFGNSLNLLVDLLGRINITKKLSWEFYDALRRRRKRDIRIVIAEAF
EKIGNPLVVASLGGKCPGFACPNAIVVDMEIIRCKEDILGILFPAIESSQDHAGAS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000053
(2576 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018536 - symbol:AT1G65780 species:3702 "Arabi... 1002 7.6e-154 3
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 1061 2.4e-134 3
TAIR|locus:2166173 - symbol:AT5G37150 species:3702 "Arabi... 840 7.6e-115 3
TAIR|locus:2135472 - symbol:AT4G05540 species:3702 "Arabi... 796 6.8e-114 4
TAIR|locus:2166183 - symbol:AT5G37160 species:3702 "Arabi... 823 1.5e-113 3
TAIR|locus:2173033 - symbol:AT5G52090 species:3702 "Arabi... 827 5.5e-112 3
TAIR|locus:2152627 - symbol:AT5G37030 species:3702 "Arabi... 787 8.0e-111 2
TAIR|locus:2166163 - symbol:AT5G37140 species:3702 "Arabi... 819 4.8e-107 2
UNIPROTKB|F1NFZ0 - symbol:TRANK1 "Uncharacterized protein... 731 1.6e-70 5
UNIPROTKB|B7WP88 - symbol:TRANK1 "TPR and ankyrin repeat-... 640 3.9e-61 5
UNIPROTKB|F1MVI7 - symbol:TRANK1 "Uncharacterized protein... 647 2.3e-59 4
UNIPROTKB|G3MYJ1 - symbol:TRANK1 "Uncharacterized protein... 647 2.6e-59 4
UNIPROTKB|O15050 - symbol:TRANK1 "TPR and ankyrin repeat-... 640 2.9e-59 6
MGI|MGI:1341834 - symbol:Trank1 "tetratricopeptide repeat... 631 4.6e-58 4
RGD|1563130 - symbol:Trank1 "tetratricopeptide repeat and... 640 2.6e-57 5
UNIPROTKB|F1PCE7 - symbol:TRANK1 "Uncharacterized protein... 627 9.0e-57 7
UNIPROTKB|F1PD19 - symbol:TRANK1 "Uncharacterized protein... 627 9.0e-57 7
UNIPROTKB|J9NSW6 - symbol:TRANK1 "Uncharacterized protein... 627 1.0e-56 7
UNIPROTKB|I3L717 - symbol:LOC100514320 "Uncharacterized p... 504 1.0e-51 3
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 468 3.4e-44 4
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 449 7.7e-43 3
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 390 8.3e-39 2
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 426 1.3e-38 4
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 423 4.2e-38 3
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 415 9.8e-38 3
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 415 9.8e-38 3
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 408 2.6e-37 4
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 388 3.1e-37 2
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 417 3.2e-37 4
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 411 3.4e-37 4
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 395 6.8e-37 2
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 413 1.0e-36 3
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 395 2.8e-36 2
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 400 6.0e-36 3
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 396 2.2e-35 3
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 431 3.3e-35 3
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 418 3.9e-35 3
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 381 4.4e-35 2
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 431 2.3e-34 4
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 377 2.9e-34 2
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 430 1.3e-33 4
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 397 2.6e-32 4
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 364 4.7e-32 3
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 369 5.8e-32 3
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 369 1.3e-31 3
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 369 1.4e-31 3
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 369 1.4e-31 3
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 369 1.4e-31 3
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 369 1.4e-31 3
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 368 1.8e-31 3
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 367 2.0e-31 3
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 342 1.3e-30 2
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 367 8.2e-30 4
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 328 1.9e-27 3
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 323 2.4e-27 3
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 326 6.7e-27 3
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 323 1.0e-26 3
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 317 1.4e-25 3
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 316 7.4e-25 3
FB|FBgn0035842 - symbol:CG7504 species:7227 "Drosophila m... 316 8.1e-24 2
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 310 4.9e-23 2
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 281 6.4e-23 3
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 274 7.2e-23 2
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 266 1.1e-22 2
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 266 1.1e-22 2
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 273 1.3e-22 3
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 270 1.3e-22 2
SGD|S000000978 - symbol:ECM32 "DNA dependent ATPase/DNA h... 167 2.2e-22 3
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 257 7.6e-22 2
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 266 8.9e-22 3
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 266 8.9e-22 3
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 256 3.6e-21 2
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 252 5.2e-21 2
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 262 9.3e-21 3
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 266 1.0e-20 3
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 305 1.2e-20 4
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 252 1.5e-20 2
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 256 1.7e-20 3
RGD|1565575 - symbol:Setx "senataxin" species:10116 "Ratt... 166 2.1e-20 2
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 288 1.3e-19 2
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 296 2.4e-19 3
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 298 3.9e-19 3
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 288 1.3e-18 2
ZFIN|ZDB-GENE-091230-8 - symbol:mov10a "Moloney leukemia ... 233 1.5e-18 3
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 303 1.8e-18 4
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 303 1.8e-18 4
CGD|CAL0001700 - symbol:orf19.702 species:5476 "Candida a... 166 2.3e-18 4
FB|FBgn0033889 - symbol:CG6701 species:7227 "Drosophila m... 243 1.5e-17 3
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 235 2.9e-17 4
RGD|1304735 - symbol:Mov10l1 "Mov10l1, Moloney leukemia v... 176 3.8e-17 3
FB|FBgn0034187 - symbol:CG6967 species:7227 "Drosophila m... 229 6.5e-17 2
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 215 7.4e-17 2
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 215 7.4e-17 2
UNIPROTKB|F1RXR7 - symbol:MOV10L1 "Uncharacterized protei... 187 1.8e-16 3
UNIPROTKB|Q9BXT6 - symbol:MOV10L1 "Putative helicase Mov1... 184 3.0e-16 3
UNIPROTKB|E1BMP7 - symbol:DNA2 "DNA replication ATP-depen... 169 4.1e-16 3
UNIPROTKB|K7DXW3 - symbol:DNA2 "DNA replication nuclease ... 169 5.3e-16 3
UNIPROTKB|G3X7G5 - symbol:MOV10L1 "Uncharacterized protei... 186 1.2e-15 3
UNIPROTKB|J9NRI6 - symbol:DNA2 "Uncharacterized protein" ... 160 1.6e-15 3
UNIPROTKB|E1BZJ8 - symbol:MOV10L1 "Uncharacterized protei... 181 1.9e-15 4
WARNING: Descriptions of 81 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 1002 (357.8 bits), Expect = 7.6e-154, Sum P(3) = 7.6e-154
Identities = 253/664 (38%), Positives = 356/664 (53%)
Query: 421 SDVEIKPFLEFVRERFKCIAAPLRSCIFNFCTHIPKCYIGEDNFHVMATLISLLDSFETL 480
SD + F +++ E+F + L + CTH+P + M I L+ L
Sbjct: 420 SDTRPQSFQDYLPEKFSELRKDLDLHFSSLCTHLPTALLSSQAATRMYEAIDLVRDVTIL 479
Query: 481 LFEDNXXXXXXXXXXXXXXXXXXXXXIVDIKYLLHKRRSECHFVLRKLLSSFNEL-NLPS 539
D + E ++ KLL S E+ LP+
Sbjct: 480 AILDGVTGEGVKSVLIPNGEGSDRFSSQHVTV-------EDDYL--KLLRSIPEIFPLPA 530
Query: 540 AVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPL 599
++ L+++L CL A L FSTAS S L++ P+ LVIDEAAQLKE ES+IP+
Sbjct: 531 VSDRHLIKEL----CLGHACLLFSTASCSARLYTGT--PIQLLVIDEAAQLKECESSIPM 584
Query: 600 QLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSIS 659
QL G++H +L GDE QLPAMVES+++ EA FGRSLFE IQYRMH SIS
Sbjct: 585 QLPGLRHLILVGDERQLPAMVESQIALEAGFGRSLFERLALLGHKKYMLNIQYRMHCSIS 644
Query: 660 FFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIE---HSCRNMV 716
FPN Y KI D+PTV +R+Y K++LPG MYGPYSFIN+ GREE+ E S +N V
Sbjct: 645 SFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLKNNV 704
Query: 717 EVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAG--FAVKVMS 774
EV VV I+ NL + +K ++++G++SPY AQV AIQEK+ + AG F++++ +
Sbjct: 705 EVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEKIQETSIGDAGGLFSLRIRT 764
Query: 775 VDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSV 834
VDGFQGGEEDIII+STVRSN G +GF+ N RR NV LTRAR CLWILGNE TL ++SV
Sbjct: 765 VDGFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLTRARFCLWILGNEATLMNSKSV 824
Query: 835 WKALVDDAKARQCFFNADDDKDLGKSIXXXXXXXXXXXXXXXPGSTLFRSQRWKVNFSDN 894
W+ L+ DAK R CF +A +D+ L ++I P + +WK+ FSD
Sbjct: 825 WRNLIQDAKERGCFHSAGEDESLAQAIASTNIEFR-------P----LNNSKWKLCFSDE 873
Query: 895 FLKSFRKLTSDQTKKLVINLLLKLASGWRPEKRKVDSVCGSSLHIIKQFKVEGFY-IICT 953
F K ++ + +T + + N L +L+ GW E+ SS ++KQ K++ II
Sbjct: 874 FKKYVGEIKNPETYRKIKNFLERLSQGWLKEEETERENLVSSSQLLKQSKIDDVLRIIWA 933
Query: 954 IDIVKES-KYFQVLKVWDILPLENVQNLLTRLDNIFVKNLEVPKNWATTSNIVRFKGLAD 1012
+DI+KE Y QVLK+WD++P + L RLD + + K+ +G
Sbjct: 934 VDILKEDFHYDQVLKIWDVVPSSDAPEALKRLD---LNHTNYTKDEIEKCKARCIRG--- 987
Query: 1013 NEXXXXXXXXXXXXXXYAENSNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTD 1072
+ E S+V S ++K + SL +V +LS + + P EV
Sbjct: 988 -DIVVPMRWSIESTNGIPEKSSVVCSSDVIKTFG-SLNLVGEMLSSVPSNDSVEPLEVEK 1045
Query: 1073 EQLD 1076
E+ D
Sbjct: 1046 EEQD 1049
Score = 309 (113.8 bits), Expect = 7.6e-154, Sum P(3) = 7.6e-154
Identities = 74/185 (40%), Positives = 110/185 (59%)
Query: 228 TVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVERDC 287
TV+LIWGPPGTGKTKT S+LL LL K RTL C PT V++ E+ASRV+KLV S++
Sbjct: 260 TVRLIWGPPGTGKTKTTSVLLFTLLNAKCRTLTCGPTNVSVLEVASRVLKLVSGSLKIGN 319
Query: 288 RDALFFPLGEILLLGNNERLKVDSGVE--EIYLDYRVKRLADCFAPLTGWSHCFASMVEF 345
+ LG+++L GN+ER+K+ + I++D RV +L CF P GW M+
Sbjct: 320 -----YGLGDVVLFGNDERMKIKDRKDLVNIFIDERVDKLYPCFMPFYGWKATIDGMIRL 374
Query: 346 LDNCVSQYHTYMEN----ESMKQSEDINGDIIKEKECGKEADASDVE----IKP--FLEF 395
L++ QY+ Y+EN ++K+ + G + K K G E + + VE +P F ++
Sbjct: 375 LEDPKGQYNLYLENLARANNVKRKD--TGSVFKRK--GNEQNENIVEQVSDTRPQSFQDY 430
Query: 396 VRERF 400
+ E+F
Sbjct: 431 LPEKF 435
Score = 269 (99.8 bits), Expect = 7.6e-154, Sum P(3) = 7.6e-154
Identities = 70/218 (32%), Positives = 112/218 (51%)
Query: 26 DTVFSWSLEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVFPLLEETRANLMSGMEKISNA 85
D V SWSL+++ N DL+K +V++IP F S G YF++F+ PL+EET A L+S M K+ A
Sbjct: 13 DLVLSWSLDEVLNVDLYKGQVEKIPMEFESTGDYFKTFIPPLIEETHAALLSSMRKLWQA 72
Query: 86 PFAQVVAFEDSKPYGSMLYDVKVDCWRNRFSNLGREPY-KTLPGDILVLADAKPETASDL 144
P ++ + Y + D+ ++ R S + E K +P D++ L D +P
Sbjct: 73 PVVEISYIMQTAEY-KLPNDL---FYKVRLSGISNEASTKLMPRDLISLTDQRPNHVDGF 128
Query: 145 QRVGRMWTFVSVANVTEDE-NEID---TSPTYFKVNATKEIQIDVSKKSLFVIFLINRTS 200
+ V V D N++ + P + + K+ + K+ LF I L+N T+
Sbjct: 129 NISSEPYIVALVCKVDPDRPNDVTILASKPLFVEDGRRKKNE---KKERLFGIHLVNLTT 185
Query: 201 NRRIWNSLHM--KG-NLKIIKELL---CTDSGATVQLI 232
N RIWN+LH +G NL +I +L D G +Q +
Sbjct: 186 NIRIWNALHPGDEGVNLNLISRVLRRNSEDEGFCIQCL 223
Score = 50 (22.7 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 1621 VAITRTRQRLWIWENKEEF--SKPMFDYW----KKRFLVQVRRLDDSLAQAMQVASSPEE 1674
V +TR R LWI N+ SK ++ K+R D+SLAQA +AS+ E
Sbjct: 800 VLLTRARFCLWILGNEATLMNSKSVWRNLIQDAKERGCFHSAGEDESLAQA--IASTNIE 857
Query: 1675 WK---SRGIKVC--EIFKKFI 1690
++ + K+C + FKK++
Sbjct: 858 FRPLNNSKWKLCFSDEFKKYV 878
Score = 41 (19.5 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 2225 FIDQSTEHLFDFIFPLE-WRESLNENMISLKGTKLYRNIIKEVFSKHIGLKGK 2276
FID+ + L+ P W+ +++ + L+ K N+ E ++ +K K
Sbjct: 346 FIDERVDKLYPCFMPFYGWKATIDGMIRLLEDPKGQYNLYLENLARANNVKRK 398
Score = 40 (19.1 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 295 LGEILL-LGNNERLKVDSGVEEIYLDYRVKRLADCFA 330
+GE+L + +N+ ++ VE+ D+ V RL D FA
Sbjct: 1025 VGEMLSSVPSNDSVE-PLEVEKEEQDFEVDRLGDLFA 1060
Score = 37 (18.1 bits), Expect = 7.8e-100, Sum P(2) = 7.8e-100
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 75 LMSGMEKISNAPFAQVVAF--------EDSKPYGSMLYDVKVDCWRNRFSNLGREPYK-T 125
L+SG KI N VV F +D K ++ D +VD F +K T
Sbjct: 310 LVSGSLKIGNYGLGDVVLFGNDERMKIKDRKDLVNIFIDERVDKLYPCFMPF--YGWKAT 367
Query: 126 LPGDILVLADAKPETASDLQRVGR 149
+ G I +L D K + L+ + R
Sbjct: 368 IDGMIRLLEDPKGQYNLYLENLAR 391
Score = 37 (18.1 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 1086 ILGRSGTGKTTVLIMKLF 1103
I G GTGKT + LF
Sbjct: 264 IWGPPGTGKTKTTSVLLF 281
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 1061 (378.5 bits), Expect = 2.4e-134, Sum P(3) = 2.4e-134
Identities = 233/472 (49%), Positives = 297/472 (62%)
Query: 517 RRSECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAM 576
R +C L L S + LP + K E L++ CL A L F TASSS LH +
Sbjct: 500 RTQDC---LEMLTSISMSIKLPDFISK--FE--LQKLCLDNAYLLFCTASSSARLHMSS- 551
Query: 577 KPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFE 636
P+ LVIDEAAQLKE ES IPLQL G++HA+L GDE QLPAM++S ++ EA GRSLFE
Sbjct: 552 -PIQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRSLFE 610
Query: 637 XXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYS 696
+QYRMHPSIS FPN FY+ KI D+P+V RSYEK+FLP MYGPYS
Sbjct: 611 RLVLLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYS 670
Query: 697 FINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQ 755
FIN+ GRE+F E +S +N+VEVSVV +I+ LY + +S+G++SPY AQV AIQ
Sbjct: 671 FINIAYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVFAIQ 730
Query: 756 EKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
E++G KY F V V SVDGFQGGEEDIIIISTVRSN G+IGF+SN +R NVALTRA
Sbjct: 731 ERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRA 790
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADDDKDLGKSIXXXXXXXXXXXXXX 875
R+CLWILGNE TLT NRSVW+ LVDDAKAR CF NA++D+ L + I
Sbjct: 791 RYCLWILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQCIERSTTALDDLNKLQ 850
Query: 876 XPGSTLFRSQRWKVNFSDNFLKSFRKLTSDQTKKLVINLLLKLASGWRPEKRKVDSVCGS 935
F + WKV S FLKS + + K V++ L KL++G K V
Sbjct: 851 NKKLISFENSIWKVWLSYEFLKSLETIVDSEINKRVMSFLEKLSNG----KELHQEVEFE 906
Query: 936 SLHIIKQFKVE-GFYIICTIDIVKES-KYFQVLKVWDILPLENVQNLLTRLD 985
S ++++Q + + G +I IDI K + ++ QVLK+W +LP +V + L+
Sbjct: 907 SENLLRQHEFDDGLSLIWAIDIFKNNNQHVQVLKIWQVLPSTDVSRVTEHLE 958
Score = 294 (108.6 bits), Expect = 2.4e-134, Sum P(3) = 2.4e-134
Identities = 74/215 (34%), Positives = 113/215 (52%)
Query: 156 VANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHMKGNLK 215
++ V + NE+D ++ + D S + L F +N + I L K
Sbjct: 228 ISRVLQSNNEVDGGSCVSCKENSESVVSDYSARMLRS-FKLNSSQEDAILRCLEAKS--- 283
Query: 216 IIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRV 275
C S ++LIWGPPGTGKTKT S+LL+ L+M+ RTL C PT +A+ E+ SR+
Sbjct: 284 ------CNHSN-NIKLIWGPPGTGKTKTTSVLLLNFLKMRCRTLTCAPTNIAVLEVCSRL 336
Query: 276 VKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVE--EIYLDYRVKRLADCFAPLT 333
VKLV ES+ D + LG+I+L GN ER+K+D + +++L+YRV L CF LT
Sbjct: 337 VKLVSESLRFDG-----YGLGDIVLFGNKERMKIDDREDLFDVFLEYRVDELYRCFMALT 391
Query: 334 GWSHCFASMVEFLDNCVSQYHTYME-NESMKQSED 367
GW M+ L + ++ + N ++ +D
Sbjct: 392 GWRANVNRMICLLSDPKHEFRQFKSVNTTLLSFKD 426
Score = 259 (96.2 bits), Expect = 1.2e-130, Sum P(3) = 1.2e-130
Identities = 73/225 (32%), Positives = 112/225 (49%)
Query: 12 SKKKRAVPYDYGFTDTVFSWSLEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVFPLLEET 71
+KKK + D VFSWSL D+ N +L++ +V +IP +F S +YFESFV P++EET
Sbjct: 10 TKKKEKIIKGRDLVDVVFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIEET 69
Query: 72 RANLMSGMEKISNAP---FAQVVAFEDSKPYGSMLYDVKVDCWRNRFSNLGREPYKTLPG 128
A+L+S M I A F ++ +D KP + Y+V + N + G + +
Sbjct: 70 HADLLSSMGTIRRAQAFKFWEIKPGKDFKPPRDLYYEVTLQM-TNEYMTKGGQNLLEV-N 127
Query: 129 DILVLADAKPETASDLQRVGRMWTFVSVANVTEDENEIDT----SPTYFKVN---ATKEI 181
D++ + D +P DL+ + V V E+ + T P F + T
Sbjct: 128 DLIAVTDKRPIRIDDLRFSHEPYLLALVCGVNENNPHLITILASKPIIFDDDDDIKTSSK 187
Query: 182 QIDVSKKSL--FVIFLINRTSNRRIWNSLHMK---GNLKIIKELL 221
+ +KSL F + LIN +N RIW +LH GNLK+I +L
Sbjct: 188 RGKGERKSLSFFGVNLINMMTNIRIWTALHPNPEGGNLKLISRVL 232
Score = 56 (24.8 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 28/102 (27%), Positives = 45/102 (44%)
Query: 1614 SELKQLYVAITRTRQRLWIWENKEEFS------KPMFDYWKKRFLVQVRRLDDSLAQAMQ 1667
S ++ VA+TR R LWI N+ + + + D K R D+SLAQ ++
Sbjct: 778 SNQQRTNVALTRARYCLWILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQCIE 837
Query: 1668 VASSP-EEWKSRGIKVCEIFKKFIIFVCLWLFYEQNYEMATI 1708
+++ ++ K F+ I V WL YE + TI
Sbjct: 838 RSTTALDDLNKLQNKKLISFENSIWKV--WLSYEFLKSLETI 877
Score = 49 (22.3 bits), Expect = 4.0e-16, Sum P(4) = 4.0e-16
Identities = 17/80 (21%), Positives = 34/80 (42%)
Query: 881 LF-RSQRWKVNFSDNFLKSFRKLTSDQTKKLVINLLLKLASGWRPEKRKVDSVCGSSLHI 939
LF +R K++ ++ F + D+ + + L +GWR ++ + H
Sbjct: 356 LFGNKERMKIDDREDLFDVFLEYRVDELYRCFMAL-----TGWRANVNRMICLLSDPKHE 410
Query: 940 IKQFKVEGFYIICTIDIVKE 959
+QFK ++ D V+E
Sbjct: 411 FRQFKSVNTTLLSFKDFVEE 430
Score = 46 (21.3 bits), Expect = 7.1e-19, Sum P(3) = 7.1e-19
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 1227 ERFHNIWKNYGQLQNSKSVFIETIIRKKEVNYERFSSSYWPHFNAQLARKLDPSRVFTEI 1286
ER + +LQN K + E I K ++YE F S ++++ +++ F E
Sbjct: 837 ERSTTALDDLNKLQNKKLISFENSIWKVWLSYE-FLKSLETIVDSEINKRV---MSFLEK 892
Query: 1287 ISHIKGGLQSIEVVNGKLNRE 1307
+S+ K Q +E + L R+
Sbjct: 893 LSNGKELHQEVEFESENLLRQ 913
Score = 42 (19.8 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 18/89 (20%), Positives = 40/89 (44%)
Query: 2248 ENMISLKGTKL--YRNIIKEVFSKHIGLKG--KLSYGQIGSAVVMILRTGKLGKDVYGRV 2303
+++ L+ KL + N I +V+ + LK + +I V+ L GK+++ V
Sbjct: 844 DDLNKLQNKKLISFENSIWKVWLSYEFLKSLETIVDSEINKRVMSFLEKLSNGKELHQEV 903
Query: 2304 AKRFDGYTPWKEFVESLSINMGLESYRGS 2332
+ EF + LS+ ++ ++ +
Sbjct: 904 EFESENLLRQHEFDDGLSLIWAIDIFKNN 932
Score = 39 (18.8 bits), Expect = 2.4e-134, Sum P(3) = 2.4e-134
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 1534 DDCVRKEISNYVGKQALVLTIVESK 1558
+ C +K+I + V + +L++VE +
Sbjct: 992 NSCSKKDIVSDVSRSFALLSVVEEE 1016
Score = 37 (18.1 bits), Expect = 3.9e-134, Sum P(3) = 3.9e-134
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 1831 LQYISYWKQHADTDVGRVKSSKE 1853
+Q + W+ TDV RV E
Sbjct: 936 VQVLKIWQVLPSTDVSRVTEHLE 958
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 840 (300.8 bits), Expect = 7.6e-115, Sum P(3) = 7.6e-115
Identities = 174/346 (50%), Positives = 236/346 (68%)
Query: 516 KRRS-ECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSV 574
KR S +C LR L F +P +E ED+ ++FCL+ A + TAS + ++
Sbjct: 470 KRLSVDCLKALRLLPKRFE---IPDMLEN---EDI-RKFCLQNADIILCTASGAAEMNVE 522
Query: 575 AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSL 634
+ LV+DEAAQLKE ES LQL G++HA+L GDE QLPAMV +++ ++A FGRSL
Sbjct: 523 RTGNVELLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSL 582
Query: 635 FEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGP 694
FE +QYRMHPSIS FPN FY +I D+ V++ Y+KRFL G M+G
Sbjct: 583 FERLVLLGHNKHLLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLQGNMFGS 642
Query: 695 YSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAA 753
+SFINV G+EEF + HS +NMVEV+VV +I+ NL+K + K+S+G+VSPY Q+ A
Sbjct: 643 FSFINVGRGKEEFGDGHSPKNMVEVAVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRA 702
Query: 754 IQEKLGSKYVNSAG--FAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVA 811
IQEK+G KY + +G FA+ V SVDGFQGGEEDIIIISTVRSN+ G +GF++N +R NVA
Sbjct: 703 IQEKIGDKYSSLSGQQFALNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVA 762
Query: 812 LTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADDDKDL 857
LTRARHCLW++GNE TL + S+W L+ +++ R CF++A D+ +L
Sbjct: 763 LTRARHCLWVIGNETTLALSGSIWATLISESRTRGCFYDATDEMNL 808
Score = 283 (104.7 bits), Expect = 7.6e-115, Sum P(3) = 7.6e-115
Identities = 74/222 (33%), Positives = 122/222 (54%)
Query: 152 TFVSVANVTEDENEIDT-SPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHM 210
T + N +E I T + + + N + + L + I R++ NS
Sbjct: 170 TNTRIWNALHNEAAISTLTKSVLQANTVNNVFVLKMMGDLTLFLDIIRSTKL---NSSQE 226
Query: 211 KGNLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKE 270
L ++ CT + V+LIWGPPGTGKTKTV+ LL LL+++ +T+VC PT AI +
Sbjct: 227 DAILGCLETRNCTHKNS-VKLIWGPPGTGKTKTVATLLFALLKLRCKTVVCAPTNTAIVQ 285
Query: 271 LASRVVKLVKESVERDCRDALFFPLGEILLLGNNERL---KVDSGVEEIYLDYRVKRLAD 327
+ASR++ L KE+ + +A + LG I+L GN +R+ K D + +++LD R+ +L
Sbjct: 286 VASRLLSLFKENSTSE--NATY-RLGNIILSGNRDRMGIHKNDHVLLDVFLDERIGKLGK 342
Query: 328 CFAPLTGWSHCFASMVEFLDNCVSQY--HTYMENESMKQSED 367
F+P +GW S+++FL+N +Y H Y E E +++ E+
Sbjct: 343 LFSPFSGWMQRLESLIQFLENPEGKYERHVY-ELEEVERMEE 383
Score = 209 (78.6 bits), Expect = 4.6e-107, Sum P(3) = 4.6e-107
Identities = 61/199 (30%), Positives = 100/199 (50%)
Query: 26 DTVFSWSLEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVFPLLEETRANLMSGMEKISNA 85
D VFSWS++DI N+D +K K +P FRSV +Y++ FV LL E L S ++ +S +
Sbjct: 11 DRVFSWSIKDILNKDFYKQKT--VPDKFRSVDEYYQCFVPHLLIEAHTELFSSLKSVSKS 68
Query: 86 PFAQVVAFEDS--KPYGSMLYDVKVDCWRNRFSNLGREPYKTLPGDILVLADAKPETASD 143
PF Q+ + E + GS + D +L + Y+ GD++ L KP +D
Sbjct: 69 PFVQIRSMETKTKQSSGSSSNKLFYDITLKATESLSAK-YQPKCGDLIALTMDKPRRIND 127
Query: 144 LQRVGRMWTFVSVANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRR 203
L + + F S + ++ S V+ ++ I + S F +FL+ T+N R
Sbjct: 128 LNPLLLAYVFSS-------DGDLKIS-----VHLSRSIS-PLENYS-FGVFLMTLTTNTR 173
Query: 204 IWNSLHMKGNLKII-KELL 221
IWN+LH + + + K +L
Sbjct: 174 IWNALHNEAAISTLTKSVL 192
Score = 89 (36.4 bits), Expect = 7.6e-115, Sum P(3) = 7.6e-115
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 416 KEADASDVEIK-PFL-EFVRERFKCIAAPLRSCIFNFCTHIPKCYIGEDNFHVMATLISL 473
+EA+ +V + P + EFV++ F ++ + +CI + TH+PK Y+ D+ +M
Sbjct: 383 EEAERQEVVVNIPTIGEFVKKNFNSLSEEVETCIVDLFTHLPKVYLPYDDVKIMIASRQS 442
Query: 474 LDSFETLLFEDN 485
L L E++
Sbjct: 443 LQRIRYFLRENS 454
Score = 42 (19.8 bits), Expect = 2.0e-22, Sum P(4) = 2.0e-22
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 1621 VAITRTRQRLWIWENK 1636
VA+TR R LW+ N+
Sbjct: 761 VALTRARHCLWVIGNE 776
Score = 42 (19.8 bits), Expect = 2.0e-22, Sum P(4) = 2.0e-22
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 1046 SLSLGVVRHLLSDRDARELDLPFEVTDEQLDMILFPRSTF 1085
+L L +RH + D E LP V +E + F RS F
Sbjct: 546 ALQLPGLRHAILIGD--EFQLPAMVHNEMCEKAKFGRSLF 583
Score = 41 (19.5 bits), Expect = 8.2e-23, Sum P(3) = 8.2e-23
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 533 NELNLPSAVEKDLLEDL 549
+E+NL +A+ + LLED+
Sbjct: 804 DEMNLRNAMNEALLEDV 820
Score = 41 (19.5 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 1086 ILGRSGTGKTTVLIMKLFQKEKL 1108
I G GTGKT + LF KL
Sbjct: 247 IWGPPGTGKTKTVATLLFALLKL 269
Score = 41 (19.5 bits), Expect = 4.8e-10, Sum P(3) = 4.8e-10
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 2301 GRVAKRFDGYTPWKEFVESL 2320
G++ K F ++ W + +ESL
Sbjct: 338 GKLGKLFSPFSGWMQRLESL 357
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 796 (285.3 bits), Expect = 6.8e-114, Sum P(4) = 6.8e-114
Identities = 168/317 (52%), Positives = 219/317 (69%)
Query: 521 CHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLN 580
C LR L +P+ + K ED+ + FCL+ A + F TAS + + + ++
Sbjct: 377 CVDCLRTLRLLSKRFEIPALLMK---EDI-RTFCLQNAHIIFCTASGAAEMTAERAGSID 432
Query: 581 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXX 640
LV+DEAAQLKE ES LQL G+ HAVL GDE QLPAMV+S+V ++A F RSLFE
Sbjct: 433 MLVVDEAAQLKECESVAALQLQGLHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLDS 492
Query: 641 XXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINV 700
+QYRMHPSIS FPN FY KI D+ V++ +Y+KRFL G M+G +SFINV
Sbjct: 493 LGHKKHLLNVQYRMHPSISLFPNMEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINV 552
Query: 701 FGGREEFIE-HSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLG 759
G+EEF + HS +NMVE++VV +IL NL K +K K+S+G++SPY AQV+AIQE++G
Sbjct: 553 GLGKEEFGDGHSPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIG 612
Query: 760 SKYVNSAG--FAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARH 817
KY + + F + V SVDGFQGGEEDIIIISTVRSN G+IGF+SN +R NVALTRARH
Sbjct: 613 DKYTSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARH 672
Query: 818 CLWILGNERTLTRNRSV 834
CLW++GNERTL+ + S+
Sbjct: 673 CLWVIGNERTLSLSGSI 689
Score = 284 (105.0 bits), Expect = 6.8e-114, Sum P(4) = 6.8e-114
Identities = 68/185 (36%), Positives = 104/185 (56%)
Query: 228 TVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVERDC 287
+V+LIWGPPGTG TKTV+ LL LL + +T+VCTPT A+ +ASR++ L KES +
Sbjct: 131 SVKLIWGPPGTGNTKTVATLLFALLSLSCKTVVCTPTNTAVVAVASRLLALFKESSSTEH 190
Query: 288 RDALFFPLGEILLLGNNERLKVDS-GVEE---IYLDYRVKRLADCFAPLTGWSHCFASMV 343
+ LG I+L+GN R+ +D G ++ ++LD R+ +L + F+P W +++
Sbjct: 191 ST---YGLGNIVLVGNRVRMGIDERGNDDLLNVFLDDRISKLGELFSPSNEWERSLEAVI 247
Query: 344 EFLDNCVSQYHTYM------ENESMKQSEDINGDIIKEKECG-KEADASDVEI-KPFLEF 395
+ L+N S Y Y+ EN+ K G+ + + G KE + EI F EF
Sbjct: 248 DILENAESSYKKYLLLSERKENQETKNILTAFGEFVMKMFLGSKETPEKEEEIILTFGEF 307
Query: 396 VRERF 400
V E+F
Sbjct: 308 VMEKF 312
Score = 103 (41.3 bits), Expect = 6.8e-114, Sum P(4) = 6.8e-114
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 172 YFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHM-KGNLKIIKELLCTDSGATVQ 230
+F V+++K I ID FLI T+N RIW +LH GNL +IK +L ++ T Q
Sbjct: 30 HFSVHSSKSISIDEQYSFRSGFFLIYLTTNTRIWKALHNGDGNLSLIKSVLQANTADTEQ 89
Query: 231 LI----WG 234
+ WG
Sbjct: 90 SVSSRNWG 97
Score = 61 (26.5 bits), Expect = 1.6e-90, Sum P(4) = 1.6e-90
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 406 GDIIKEKECG-KEADASDVEI-KPFLEFVRERFKCIAAPLRSC---IFNFCTHIPKCYIG 460
G+ + + G KE + EI F EFV E+F ++ ++ + + TH+PK ++
Sbjct: 280 GEFVMKMFLGSKETPEKEEEIILTFGEFVMEKFDGLSETMKKIQKDMVDLYTHLPKSFLS 339
Query: 461 EDNFHVMATLISLLDSFETLLFE 483
++ M L T L E
Sbjct: 340 SNDVKNMIVARQALRQARTFLQE 362
Score = 46 (21.3 bits), Expect = 6.8e-114, Sum P(4) = 6.8e-114
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 1614 SELKQLYVAITRTRQRLWIWENKEEFS 1640
S ++ VA+TR R LW+ N+ S
Sbjct: 658 SNRQRANVALTRARHCLWVIGNERTLS 684
Score = 44 (20.5 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 1585 EYMK--EQDLLDSTS--PGSFPSFNEVKHNILCSE-LKQ 1618
E MK ++D++D + P SF S N+VK+ I+ + L+Q
Sbjct: 317 ETMKKIQKDMVDLYTHLPKSFLSSNDVKNMIVARQALRQ 355
Score = 43 (20.2 bits), Expect = 4.4e-25, Sum P(3) = 4.4e-25
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 1851 SKEMKKIEQDFLQSCALHFHK--LNDNKSMMKFVRAFHSMDLIRNFLNSK-GCF 1901
S+ MKKI++D + H K L+ N + + A ++ R FL K G F
Sbjct: 316 SETMKKIQKDMVDLYT-HLPKSFLSSN-DVKNMIVARQALRQARTFLQEKQGSF 367
Score = 38 (18.4 bits), Expect = 1.3e-24, Sum P(4) = 1.3e-24
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 1046 SLSLGVVRHLLSDRDARELDLPFEVTDEQLDMILFPRSTF 1085
+L L + H + D EL LP V E + F RS F
Sbjct: 450 ALQLQGLHHAVLIGD--ELQLPAMVQSEVCEKAKFVRSLF 487
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 823 (294.8 bits), Expect = 1.5e-113, Sum P(3) = 1.5e-113
Identities = 166/316 (52%), Positives = 220/316 (69%)
Query: 547 EDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKH 606
ED+ ++FCL+ A + F TASS ++ + ++ LV+DE AQLKE ES LQL G+ H
Sbjct: 529 EDI-RKFCLQNADIIFCTASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCH 587
Query: 607 AVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYF 666
A+L GDE QLPAMV ++ D+A FGRSLFE +QYRMHPSIS FPN F
Sbjct: 588 ALLIGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEF 647
Query: 667 YENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKIL 725
Y +I D+ V++ YEKRFL G M+G +SFINV G+EEF + HS +NMVEV+V+ KI+
Sbjct: 648 YGGRITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEEFGDGHSPKNMVEVAVISKII 707
Query: 726 LNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAG----FAVKVMSVDGFQGG 781
NL+K K+K+S+G++SPY QV AIQE++G KY NS F + V SVDGFQGG
Sbjct: 708 SNLFKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKY-NSLSVDQLFTLNVQSVDGFQGG 766
Query: 782 EEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDD 841
E D+IIISTVR N G++GF+SN +R NVALTRARHCLW++GN TL + S+W L+ +
Sbjct: 767 EVDVIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAELISE 826
Query: 842 AKARQCFFNADDDKDL 857
++ R CF++A DDK+L
Sbjct: 827 SRTRGCFYDAVDDKNL 842
Score = 205 (77.2 bits), Expect = 1.5e-113, Sum P(3) = 1.5e-113
Identities = 67/208 (32%), Positives = 102/208 (49%)
Query: 30 SWSLEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVFPLLEETRANLMSGMEKISNAPFAQ 89
SWSL+DI NEDL K+K+ IP F SV +Y + FV LLEETR L S +S +P ++
Sbjct: 24 SWSLKDILNEDLSKEKIMTIPDRFSSVDEYSQCFVPHLLEETRTELFSSFRSLSKSPVSR 83
Query: 90 VVAFEDSKPYGSMLYDVKV--DCWRNRFSNLGREPYKTLPGDILVLADAKPETASDLQRV 147
+++ E S +K D +++ E Y+ GDI+ L+ + R+
Sbjct: 84 ILSVETKVIEYSGRSSIKWFHDIKLMDYADDKNEIYEPKCGDIIALSPLS--LTEERPRI 141
Query: 148 GRMWTFVS--VANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFV--IFLINRTSNRR 203
+ + V +V D K++ I S+K F +FLIN T+N R
Sbjct: 142 DDLDPLLLGYVFSVYGDS----------KISVHFSRSISQSEKHTFCTGVFLINITTNTR 191
Query: 204 IWNSLHMKG-NLKIIKELLCTDSGATVQ 230
IWN+LH + +I+ +L D+ AT Q
Sbjct: 192 IWNALHKDAADSTLIQSVLQEDASATEQ 219
Score = 172 (65.6 bits), Expect = 1.5e-113, Sum P(3) = 1.5e-113
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 206 NSLHMKGNLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTI 265
NS L +K C +V+LIWGPPGTGKTKTV+ LL L+Q+K +T+VC PT
Sbjct: 245 NSSQEAAILGFLKTRNCKHK-ESVKLIWGPPGTGKTKTVATLLSTLMQLKCKTVVCAPTN 303
Query: 266 VAIKELASRVVKLVKESV 283
I +ASR++ L KE++
Sbjct: 304 TTIVAVASRLLSLSKETI 321
Score = 52 (23.4 bits), Expect = 6.6e-23, Sum P(4) = 6.6e-23
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 2053 VLVEKICNNRISVQTLIYFWNC-WKDKIVNVLKYLE 2087
VL+ N+R+S ++ C WK ++ +++ +LE
Sbjct: 375 VLLNVFFNDRVSKLGRLFLSTCGWKKRLESIIDFLE 410
Score = 43 (20.2 bits), Expect = 2.1e-22, Sum P(4) = 2.1e-22
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 1607 VKHNI-LCSELKQLYVAITRTRQRLWIWEN 1635
V N+ S ++ VA+TR R LW+ N
Sbjct: 780 VNGNVGFLSNRQRANVALTRARHCLWVIGN 809
Score = 41 (19.5 bits), Expect = 2.1e-22, Sum P(4) = 2.1e-22
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 1046 SLSLGVVRHLLSDRDARELDLPFEVTDEQLDMILFPRSTF 1085
+L L + H L D E LP V +E+ D F RS F
Sbjct: 579 ALQLPGLCHALLIGD--EYQLPAMVHNEECDKAKFGRSLF 616
Score = 37 (18.1 bits), Expect = 6.6e-23, Sum P(4) = 6.6e-23
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 2433 VQQFLYSEKETMEWIKKSCTEIKDYHSLVVLRLFVIVCLLHLNFG 2477
V+ FL E + + KK ++ L+ + +CLL FG
Sbjct: 478 VRYFL-QENSSRDDFKKGGFRFNCFNKLISVDALQALCLLPKCFG 521
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 827 (296.2 bits), Expect = 5.5e-112, Sum P(3) = 5.5e-112
Identities = 172/346 (49%), Positives = 232/346 (67%)
Query: 516 KRRSE-CHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSV 574
KR S+ C LR L F +P +E ED+ ++FCL+ A + TAS + ++
Sbjct: 307 KRLSDDCLKALRLLPKRFE---IPDMLEN---EDI-RKFCLQNADIILCTASGAAEMNVE 359
Query: 575 AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSL 634
+ LV+DEAAQLKE ES LQL G++HA+L GDE QLPAMV +++ ++A FGRSL
Sbjct: 360 RTGNVELLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSL 419
Query: 635 FEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGP 694
FE +QYRMHPSIS FPN FY +I D+ V++ Y+KRFL G M+
Sbjct: 420 FERLVLLGHNKHLLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLKGNMFDS 479
Query: 695 YSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAA 753
+SFINV G+EEF + HS +NMVEV+V+ +I+ NLYK + K+S+G+VSPY Q+ A
Sbjct: 480 FSFINVGRGKEEFGDGHSPKNMVEVAVISEIISNLYKVSCERRMKVSVGVVSPYKGQMRA 539
Query: 754 IQEKLGSKYVNSAG--FAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVA 811
IQEK+G KY + +G F + V SVDGFQGGEEDIIIISTVRSN G +GF++N +R NVA
Sbjct: 540 IQEKIGDKYSSLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVA 599
Query: 812 LTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADDDKDL 857
LTRARHCLW++GNE TL + S+W L+ +++ R CF +A D+ +L
Sbjct: 600 LTRARHCLWVIGNETTLALSGSIWATLISESRTRGCFHDATDEMNL 645
Score = 273 (101.2 bits), Expect = 5.5e-112, Sum P(3) = 5.5e-112
Identities = 75/232 (32%), Positives = 123/232 (53%)
Query: 152 TFVSVANVTEDENEIDT-SPTYFKVNATKEIQIDVSK---KSLFVIFLINRTSNRRIWNS 207
T + N +E +I T + + + N Q S+ +S V+ +I T NS
Sbjct: 5 TNTRIWNALHNEADISTLTKSVLQANTEGTEQCFCSENDGRSDLVLDIIRSTK----LNS 60
Query: 208 LHMKGNLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVA 267
L ++ CT + V+LIWGPP TGKTKTV+ LL LL+++ +T+VC PT A
Sbjct: 61 SQEDAILGCLETRNCTHKNS-VKLIWGPPRTGKTKTVATLLFALLKLRCKTVVCAPTNTA 119
Query: 268 IKELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERL---KVDSGVEEIYLDYRVKR 324
I ++ SR++ L KE+ + +A + LG I+L GN +R+ K D + +++LD R+ +
Sbjct: 120 IVQVTSRLLSLFKENSTAE--NATY-RLGNIILSGNRDRMGINKNDHVLLDVFLDERIGK 176
Query: 325 LADCFAPLTGWSHCFASMVEFLDNCVSQY--HTY-MENESMKQSEDINGDII 373
L F+P +GW S+++FL+N +Y H Y +E ED +++
Sbjct: 177 LGKLFSPFSGWMQRLESLIQFLENPEGKYERHVYELEEVERMNEEDEREEVV 228
Score = 85 (35.0 bits), Expect = 5.5e-112, Sum P(3) = 5.5e-112
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 409 IKEKECGKEADASD---VEIKPFLEFVRERFKCIAAPLRSCIFNFCTHIPKCYIGEDNFH 465
++E E E D + V I F EFV++ F ++ +++CI + TH+PK Y+ ++
Sbjct: 212 LEEVERMNEEDEREEVVVNIPTFGEFVQKNFNSLSEEVKTCIVDLYTHLPKVYLPYEDVK 271
Query: 466 VMATLISLLDSFETLLFEDN 485
M L L E++
Sbjct: 272 KMIASRQTLQRIRYFLRENS 291
Score = 59 (25.8 bits), Expect = 1.7e-89, Sum P(3) = 1.7e-89
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 199 TSNRRIWNSLHMKGNLKII-KELLCTDSGATVQ 230
T+N RIWN+LH + ++ + K +L ++ T Q
Sbjct: 4 TTNTRIWNALHNEADISTLTKSVLQANTEGTEQ 36
Score = 42 (19.8 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 1621 VAITRTRQRLWIWENK 1636
VA+TR R LW+ N+
Sbjct: 598 VALTRARHCLWVIGNE 613
Score = 42 (19.8 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 1046 SLSLGVVRHLLSDRDARELDLPFEVTDEQLDMILFPRSTF 1085
+L L +RH + D E LP V +E + F RS F
Sbjct: 383 ALQLPGLRHAILIGD--EFQLPAMVHNEMCEKAKFGRSLF 420
Score = 40 (19.1 bits), Expect = 9.1e-22, Sum P(3) = 9.1e-22
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 533 NELNLPSAVEKDLLEDL 549
+E+NL A+ + LLED+
Sbjct: 641 DEMNLRDAMNEALLEDV 657
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 787 (282.1 bits), Expect = 8.0e-111, Sum P(2) = 8.0e-111
Identities = 157/282 (55%), Positives = 202/282 (71%)
Query: 579 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXX 638
+ LV+DEAAQLKE ES LQL G++HA+L GDE QLPAMV + ++A FGRSLFE
Sbjct: 348 IEVLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERL 407
Query: 639 XXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFI 698
+QYRMHPSIS FP FY +I D+ V++ Y+KRFL G M+G +SFI
Sbjct: 408 VLLGHKKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFI 467
Query: 699 NVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEK 757
NV G+EEF + S +NMVEV+VV +I+ NL+K K K+S+G+++PY QV AIQE+
Sbjct: 468 NVGRGKEEFGDGDSPKNMVEVAVVSEIISNLFKVSRERKMKMSVGVITPYKGQVRAIQER 527
Query: 758 LGSKYVNSAG--FAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
+ KY + +G F V V SVDGFQGGEEDIIIISTVRSN+ G +GF+SN +R NVALTRA
Sbjct: 528 IRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRA 587
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADDDKDL 857
RHCLW++GNE TL R+ S+W L+ D+K R+CF++A DDK L
Sbjct: 588 RHCLWVIGNESTLARSGSIWANLISDSKRRKCFYDAKDDKRL 629
Score = 358 (131.1 bits), Expect = 8.0e-111, Sum P(2) = 8.0e-111
Identities = 104/344 (30%), Positives = 178/344 (51%)
Query: 26 DTVFSWSLEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVFPLLEETRANLMSGMEKISNA 85
D +FSWS+EDI N+DL+K K+K IP F SV +Y + FV LLEETR L + + +S A
Sbjct: 11 DRIFSWSMEDILNKDLYKQKIKTIPDKFSSVNEYLKCFVPHLLEETRTELSTSFKSLSKA 70
Query: 86 PFAQVVAFED--SKPYGSMLYDVKVDCWRNRFSNLGREPYKTLPGDILVLADAKPETASD 143
++ + E + GS+ + D N ++ RE Y+ GD++ L +P D
Sbjct: 71 HLFEISSLETMTKESSGSLSNKLFYDMSINDALSI-REKYQPKCGDLIALTKERPRGVDD 129
Query: 144 LQRV--GRMW--TFVSVANVTE-----DENE-IDTSPTYFKVNATKEIQIDVSKKSLFVI 193
L + G + T+ +++ + DE + + +P + + + +Q + + V
Sbjct: 130 LNPLLLGSISVDTYPNISVILSRLIFHDEKKSLGFAPNFDLIQSV--LQPNTAGMEPIVS 187
Query: 194 FLINRTSNRRIWN-----SLHMKGNLKIIKELLCTDSGA--TVQLIWGPPGTGKTKTVSM 246
+RT + + + L+ I+ L DS +V+LIWGP KTKTV+
Sbjct: 188 ---SRTWGQNVLDIIRSSKLNSSQEAAILSCLETRDSNHKNSVKLIWGPL---KTKTVAT 241
Query: 247 LLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVERDCRDALFFPLGEILLLGNNER 306
LL++LL+++ +T+VC PT AI E+ SR++ L + E + LG I L GN +R
Sbjct: 242 LLLVLLKLRCKTVVCAPTNTAIVEVTSRLLALSNKYSEHAT-----YGLGNIFLAGNQKR 296
Query: 307 LKV-DSG-VEEIYLDYRVKRLADCFAPLTGWSHCFASMVEFLDN 348
+++ D+ + ++LD+R+ +L F GW S+++ L+N
Sbjct: 297 MRIKDTDYLRNVFLDHRISKLRKLFLSTCGWKQSLESIIDLLEN 340
Score = 45 (20.9 bits), Expect = 8.8e-28, Sum P(3) = 8.8e-28
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 1614 SELKQLYVAITRTRQRLWIWENKEEFSK 1641
S ++ VA+TR R LW+ N+ ++
Sbjct: 575 SNRQRANVALTRARHCLWVIGNESTLAR 602
Score = 44 (20.5 bits), Expect = 8.8e-28, Sum P(3) = 8.8e-28
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 1046 SLSLGVVRHLLSDRDARELDLPFEVTDEQLDMILFPRSTF 1085
+L L +RH + D E LP V ++Q + F RS F
Sbjct: 367 ALQLPGLRHAILIGD--EFQLPAMVHNDQCEKAKFGRSLF 404
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 819 (293.4 bits), Expect = 4.8e-107, Sum P(2) = 4.8e-107
Identities = 170/325 (52%), Positives = 223/325 (68%)
Query: 537 LPSAVE-KDLLEDL-LKRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESE 594
LP E D+LE+ K FCL+ A + F TAS + ++ + ++ LV+DEAAQLKE E
Sbjct: 341 LPERFEVSDMLENNDTKTFCLQNADIIFCTASGAADMNPIRTGSVDLLVVDEAAQLKECE 400
Query: 595 STIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRM 654
S LQLSG++HAVL GDE QLPAMV + EA FGRSLFE +QYRM
Sbjct: 401 SVAALQLSGLRHAVLIGDELQLPAMVHN----EAKFGRSLFERLVLLGHNKHLLNVQYRM 456
Query: 655 HPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIE-HSCR 713
HPSIS FPN FY +I D+ V++ Y+KRFL G M+G +SFINV G EEF + HS +
Sbjct: 457 HPSISRFPNKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGEEEFGDGHSPK 516
Query: 714 NMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAG-FAVKV 772
NMVEV+V+ +I+ NL+K + K+S+G+VSPY QV AIQE+ +KY + +G F + V
Sbjct: 517 NMVEVAVISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFTLNV 576
Query: 773 MSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNR 832
SVDGFQGGEEDIIIISTVRSN G +GF++N +R NVALTRARHCLW++GNE TL +
Sbjct: 577 RSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSG 636
Query: 833 SVWKALVDDAKARQCFFNADDDKDL 857
S W L+ +++ CF++A D+K+L
Sbjct: 637 SSWAKLISESRTLGCFYDAADEKNL 661
Score = 290 (107.1 bits), Expect = 4.8e-107, Sum P(2) = 4.8e-107
Identities = 70/197 (35%), Positives = 111/197 (56%)
Query: 206 NSLHMKGNLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTI 265
NS L +K C + V+LIWGPPGTGKTKTV+ LL LL++ +T+VC PT
Sbjct: 75 NSSQEAAILSCLKIRNCNHKHS-VKLIWGPPGTGKTKTVATLLFCLLKLSCKTVVCAPTN 133
Query: 266 VAIKELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERL--KVDSGVEEIYLDYRVK 323
AI E+ SR++ L K S + LG I+L GN R+ K + + +++LD R+
Sbjct: 134 TAIVEVTSRLLSLFKTSSSEHST----YGLGNIVLSGNQARMGIKENDVLLDVFLDERIG 189
Query: 324 RLADCFAPLTGWSHCFASMVEFLDNCVSQYHTYMENESMKQSEDINGDIIKEKECGKEAD 383
L F+P +GW S+++FL+N ++Y Y+ +K+ E ++ + K+K+ G +
Sbjct: 190 ILTSLFSPTSGWKQRLESLIDFLENTEAKYEHYVH--LLKEVERMSEEAEKKKK-GADKK 246
Query: 384 ASDVEIKPFLEFVRERF 400
++I F EFV++ F
Sbjct: 247 PKAIKILTFGEFVKKTF 263
Score = 86 (35.3 bits), Expect = 7.6e-91, Sum P(3) = 7.6e-91
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 191 FVIFLINRTSNRRIWNSLHMKG-NLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSML 247
F +FL+N T+N RIWN+LH + N +IK +L ++ T Q + G + +++
Sbjct: 12 FGVFLMNLTTNTRIWNALHNEAANSTLIKSVLQENTLTTEQCVCESGAHGSDRVTNII 69
Score = 79 (32.9 bits), Expect = 7.6e-91, Sum P(3) = 7.6e-91
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 410 KEKECGKEADASDVEIKPFLEFVRERFKCIAAPLRSCIFNFCTHIPKCYIGEDNFHVMAT 469
++K+ G + ++I F EFV++ F + L + + TH+PK +I +N M T
Sbjct: 237 EKKKKGADKKPKAIKILTFGEFVKKTFDGFSEELEKGMVDLWTHLPKSFITSENVKSMVT 296
Query: 470 LISLLDSFETLLFED 484
L L E+
Sbjct: 297 ARKALQRVRYFLKEN 311
Score = 42 (19.8 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 1621 VAITRTRQRLWIWENK 1636
VA+TR R LW+ N+
Sbjct: 614 VALTRARHCLWVIGNE 629
Score = 39 (18.8 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 2244 ESLNENMISLKGTKLYRNIIKEVFSKHIGLKGKLSY 2279
E++ + + K + R +KE FS+ KG L +
Sbjct: 289 ENVKSMVTARKALQRVRYFLKENFSRDDFKKGSLKF 324
Score = 38 (18.4 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 533 NELNLPSAVEKDLLEDLLKRF 553
+E NL A+ + LLED+ F
Sbjct: 657 DEKNLRDAMNEALLEDVSTSF 677
>UNIPROTKB|F1NFZ0 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000212
InterPro:IPR014016 InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361
SMART:SM00248 GO:GO:0005524 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0004003
PANTHER:PTHR11070 OMA:EQHIHLE GeneTree:ENSGT00620000088104
EMBL:AADN02001320 IPI:IPI00602149 Ensembl:ENSGALT00000019695
Uniprot:F1NFZ0
Length = 2477
Score = 731 (262.4 bits), Expect = 1.6e-70, Sum P(5) = 1.6e-70
Identities = 214/714 (29%), Positives = 352/714 (49%)
Query: 1256 VNYERFSSSYWPHFNAQLARKL-DPSRVFTEIISHIKGGLQSIEVVNGKLNREDYVNLSE 1314
V Y+ F++ WP + L +P+ V+ EI S +KG +++ GKL E Y L
Sbjct: 818 VTYDLFANEIWPKMIK--GKSLYNPALVWKEIKSFLKGSFEALSCFGGKLTEEQYKKLGR 875
Query: 1315 TRNSSLSRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLKEESYKGDEFHFVYID 1374
R+ + + + E IY +F Y+Q++ + G FD DL+ +L RL + H Y D
Sbjct: 876 KRSPNFTEDRSE-IYHLFCLYQQIRSQRGYFDEEDLLYNLSQRLSQLGELPWSIHEFYGD 934
Query: 1375 EVQDLTMSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDIRSLFYKKFVLESRNN 1434
E+QD T +++AL C N +GDTAQ+I +G+ FRF D+RSLF+ S+N
Sbjct: 935 EIQDFTQAELALLMK-CINDPNSMFLTGDTAQSIMKGVAFRFSDLRSLFH----YASKNT 989
Query: 1435 GNDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHSVDILKPETSLIYGEP 1494
D +Q R+ I+ L QN+R+H G+L+LA +++LL +FP S D L + L G
Sbjct: 990 V-DKKQRVRKPKRIYQLYQNYRSHSGILSLASGVVDLLQYYFPESFDRLPKDCGLFDGPK 1048
Query: 1495 PILLESGDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTI 1554
P +LES + + + GN + + FGA QV+LV ++ +++I + ALVLT+
Sbjct: 1049 PTVLESCSFSDLAILLRGNKRKT--QPIEFGAHQVVLVANETAKEKIPEELSL-ALVLTV 1105
Query: 1555 VESKGLEFQDVLLYKFFSASPLKNQWRVVYEYMKEQD------LL------DSTSPGSFP 1602
E+KGLEF DVLLY FF+ S +W+++ Y + D LL D+T+ P
Sbjct: 1106 YEAKGLEFDDVLLYNFFTDSEASKEWKIISSYTPDSDVQVGSKLLIEMPLEDATAMQKRP 1165
Query: 1603 -SFNEVKHNILCSELKQLYVAITRTRQRLWIWENKEEFSKPMFDYWKKRFLVQVRRLDDS 1661
SFN + +L ELKQLY AITR R LWI++ + P F Y+ KR VQV + D++
Sbjct: 1166 TSFNAEMYKMLNGELKQLYTAITRARVNLWIFDENSDKRAPAFKYFIKRGFVQVVKTDEN 1225
Query: 1662 --LAQAMQV-ASSPEEWKSRGIKVCEIFKKFIIFVCLWLFYEQNYEMATICFEKAKDTYW 1718
L +M SSPEEW ++G + + K Q +E+A C++K
Sbjct: 1226 KDLDDSMFAKTSSPEEWIAQG----DYYAK-----------HQFWEVAAKCYQKG----- 1265
Query: 1719 EGRSKASGLKAAADRI-----SSSNPLEARIILREAAKIFEAIGKVDSAAKCFFDMGEYE 1773
G ++ S L A D + S+P E ++ AK + G+ + KC F E+
Sbjct: 1266 -GAAEKSKLALAHDAVLKVHSKKSSPREKQMEYMTLAKTYLECGEPKLSLKCLFQSKEFR 1324
Query: 1774 RAGTIYLERCEE-PELEKAGECFSLAGCYKLAADVYARGSFLAECLDVCSKGKLFDIGLQ 1832
+ E C++ +++ A + CYK A++ Y + + + + +L++ +
Sbjct: 1325 ----LCAELCKKLGKMKDAAVYYQKNQCYKEASECYEQIEEFDLAIKMYCQEELYEEAAK 1380
Query: 1833 YISYWKQHADTDVGRVKSSKEMKKIEQDFLQSCALHFHKLNDNKSMMKFVRAFHSMDLIR 1892
+ +++ + G++ S K Q +L++ A + +N + MM+ + D +
Sbjct: 1381 AVERYEEMLNAR-GQMVS-KLSCTANQLYLEAAAKYL-SVNRIEEMMQVLSKLDIEDQLE 1437
Query: 1893 NFLNSKGCFDXXXXXXXXXXXFMDAANIARLRGDILRTVDLLQKVGNFKEACNL 1946
FL S+GC +AA + + G L +L + F+ +C L
Sbjct: 1438 -FLKSRGCLHQTADLLKREGRQEEAAKLMKQHGYALEAANLTA-IKEFRASCLL 1489
Score = 94 (38.1 bits), Expect = 1.6e-70, Sum P(5) = 1.6e-70
Identities = 23/69 (33%), Positives = 43/69 (62%)
Query: 1041 LMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMI-LFPRST---FILGRSGTGKTT 1096
+MKF+S S + ++++D + ++ PF V + + +I L P+ ++GRSGTGKTT
Sbjct: 522 IMKFHSFSTNMALNIINDVHSA-VEYPFRVGELEYAVIDLNPKPMEPIILIGRSGTGKTT 580
Query: 1097 VLIMKLFQK 1105
+ +L++K
Sbjct: 581 CCLYRLWKK 589
Score = 78 (32.5 bits), Expect = 1.6e-70, Sum P(5) = 1.6e-70
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 1140 LRQLFVTVSPKLCFAV-KQHISHMKSSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFID 1198
L Q+FVT +P LC V K I KSS + F ++ + +L+D+ +
Sbjct: 687 LHQIFVTKNPVLCQEVQKNFIELSKSSKVTSHFKP----LEPN----VHRLQDVKD---- 734
Query: 1199 IPAKSYPLVITFHKFLMMLDGTLCNSYFER 1228
+++PL IT + L++LD +L + +F R
Sbjct: 735 ---ENFPLFITSKQLLLLLDASLPDPFFPR 761
Score = 43 (20.2 bits), Expect = 1.6e-70, Sum P(5) = 1.6e-70
Identities = 12/60 (20%), Positives = 28/60 (46%)
Query: 2210 SNYSSLQYHAKVLQKFIDQSTEHLFDFIFPLEWRESLNENMISLKGTKLYRNIIKEVFSK 2269
+N ++ + +A +++ID D + + R +++ +G+ L + IKE K
Sbjct: 2331 NNNAAYKNYADFFRRWIDPKIRDGLDVVEAITERTYTQDHLAYKEGSNLCQRKIKENIKK 2390
Score = 43 (20.2 bits), Expect = 2.8e-65, Sum P(5) = 2.8e-65
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 164 NEIDTSPTY-FKVNATKEIQIDVSKKSLFVIFLINRT 199
N++ ++ Y F+V + ID++ K + I LI R+
Sbjct: 538 NDVHSAVEYPFRVGELEYAVIDLNPKPMEPIILIGRS 574
Score = 42 (19.8 bits), Expect = 3.6e-65, Sum P(5) = 3.6e-65
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 156 VANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLH 209
V ++ ++++ T P YF + E++ ++ K F F N N I N +H
Sbjct: 493 VEDLEREKSKEHTIPEYFPPASAAEMEYNIMK---FHSFSTNMALN--IINDVH 541
Score = 41 (19.5 bits), Expect = 2.8e-65, Sum P(5) = 2.8e-65
Identities = 19/76 (25%), Positives = 36/76 (47%)
Query: 352 QYHTYMENESMKQSEDINGDIIKEKECGKEADASDVEIKPFLEFVRERFKCIINGDIIKE 411
++++Y E +M S + ++++C SDVE K LE E + + D E
Sbjct: 589 KFYSYWEKSTMANSPLLERQTWRQRQC------SDVE-KARLE--NEECEEKQDNDDSSE 639
Query: 412 KECGKEAD--ASDVEI 425
++ +E D + D E+
Sbjct: 640 EQVSEEQDQDSEDEEV 655
Score = 40 (19.1 bits), Expect = 1.6e-70, Sum P(5) = 1.6e-70
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 359 NESMKQSEDINGDIIKEKECGKEADASDV 387
+E K +DI G ++K K ASDV
Sbjct: 148 SEKKKYRQDIAGQLVKTP---KPTPASDV 173
Score = 39 (18.8 bits), Expect = 4.6e-65, Sum P(5) = 4.6e-65
Identities = 6/22 (27%), Positives = 17/22 (77%)
Query: 664 SYFYENKIHDSPTVEKRSYEKR 685
SY+ ++ + +SP +E++++ +R
Sbjct: 592 SYWEKSTMANSPLLERQTWRQR 613
Score = 37 (18.1 bits), Expect = 3.3e-70, Sum P(5) = 3.3e-70
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 343 VEFLDNCVSQYHTYMENESMKQSEDINGDIIKE 375
++F C ME E K + +G + E
Sbjct: 401 IDFSPRCSESAEKIMETEQTKSLPEKSGRVYTE 433
>UNIPROTKB|B7WP88 [details] [associations]
symbol:TRANK1 "TPR and ankyrin repeat-containing protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000212
InterPro:IPR014016 InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361
GO:GO:0005524 GO:GO:0003677 GO:GO:0004003 PANTHER:PTHR11070
EMBL:AC011816 EMBL:AC097360 EMBL:AC105749 HGNC:HGNC:29011
HOGENOM:HOG000168939 HOVERGEN:HBG108082 ChiTaRS:TRANK1
IPI:IPI00927835 Ensembl:ENST00000301807 Ensembl:ENST00000428977
Uniprot:B7WP88
Length = 2375
Score = 640 (230.4 bits), Expect = 3.9e-61, Sum P(5) = 3.9e-61
Identities = 205/709 (28%), Positives = 334/709 (47%)
Query: 1256 VNYERFSSSYWPHFNAQLARKLDPSRVFTEIISHIKGGLQSIEVVNGKLNREDYVNLSET 1315
V +E F + WP +P+ ++ EI S +KG +++ +G+L E Y L
Sbjct: 727 VTFEVFKNEIWPKMTKGRTA-YNPALIWKEIKSFLKGSFEALSCPHGRLTEEVYKKLGRK 785
Query: 1316 RNSSLSRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLKEESYKGDEFHFVYIDE 1375
R + ++ R IY +F Y+Q++ + G FD D++ ++ RL + H +Y DE
Sbjct: 786 RCPNF-KEDRSEIYSLFSLYQQIRSQKGYFDEEDVLYNISRRLSKLRVLPWSIHELYGDE 844
Query: 1376 VQDLTMSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDIRSLFYKKFVLESRNNG 1435
+QD T +++AL C N +GDTAQ+I +G+ FRF D+RSLF+ SRN
Sbjct: 845 IQDFTQAELALLMK-CINDPNSMFLTGDTAQSIMKGVAFRFSDLRSLFH----YASRNT- 898
Query: 1436 NDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHSVDILKPETSLIYGEPP 1495
D + R+ I L QN+R+H G+LNLA +++LL +FP S D L ++ L G P
Sbjct: 899 IDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPKP 958
Query: 1496 ILLESGDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIV 1555
+LES + + + GN + + FGA QVILV ++ +++I +G ALVLTI
Sbjct: 959 TVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANETAKEKIPEELGL-ALVLTIY 1015
Query: 1556 ESKGLEFQDVLLYKFFSASPLKNQWRVVYEYM------KEQDL------LDS--TSPGSF 1601
E+KGLEF DVLLY FF+ S +W+++ + +E++ LD +S G
Sbjct: 1016 EAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPTSTDSREENRPLVEVPLDKPGSSQGRS 1075
Query: 1602 PSFNEVKHNILCSELKQLYVAITRTRQRLWIWENKEEFSKPMFDYWKKRFLVQVRRLDDS 1661
N + +L ELKQLY AITR R LWI++ E P F Y+ +R VQV + D++
Sbjct: 1076 LMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENREKRAPAFKYFIRRDFVQVVKTDEN 1135
Query: 1662 --LAQAMQV-ASSPEEWKSRGIKVCEIFKKFIIFVCLWLFYEQNYEMATICFEKAKDTYW 1718
+M V S+P EW ++G + + K C W + Y+ FEK K
Sbjct: 1136 KDFDDSMFVKTSTPAEWIAQG----DYYAKH---QC-WKVAAKCYQKGG-AFEKEKLAL- 1185
Query: 1719 EGRSKASGLKAAADRISSSNPLEARIILREAAKIFEAIGKVDSAAKCFFDMGEYERAGTI 1778
A +K+ ++S P E ++ E AK + + + KC E++ + +
Sbjct: 1186 -AHDTALSMKSK--KVS---PKEKQLEYLELAKTYLECKEPTLSLKCLSYAKEFQLSAQL 1239
Query: 1779 YLERCEE-PELEKAGECFSLAGCYKLAADVYARGSFLAECLDVCSKGKLFDIGLQYISYW 1837
CE ++ A + + CYK A + + L + + +LF+ + +
Sbjct: 1240 ----CERLGKIRDAAYFYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFEEAAIAVEKY 1295
Query: 1838 KQHADTDVGRVKSSKEMKKIEQDFLQSCALHFHKLNDNKSMMKFVRAFHSMDLIRNFLNS 1897
++ T + SK Q +L++ A + N K MM + D + FL S
Sbjct: 1296 EEMLKTKT--LPISKLSYSASQFYLEAAAKYL-SANKMKEMMAVLSKLDIEDQLV-FLKS 1351
Query: 1898 KGCFDXXXXXXXXXXXFMDAANIARLRGDILRTVDLLQKVGNFKEACNL 1946
+ +AA + + G +L L +F+ +C L
Sbjct: 1352 RKRLAEAADLLNREGRREEAALLMKQHGCLLEAARLTADK-DFQASCLL 1399
Score = 104 (41.7 bits), Expect = 3.9e-61, Sum P(5) = 3.9e-61
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 1033 SNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMI-LFPRST---FILG 1088
S V +MKF+S S + ++L+D A ++ PF V + + +I L PR ++G
Sbjct: 424 SAVETEYNIMKFHSFSTNMAFNILNDTTAT-VEYPFRVGELEYAVIDLNPRPLEPIILIG 482
Query: 1089 RSGTGKTTVLIMKLFQK 1105
RSGTGKTT + +L++K
Sbjct: 483 RSGTGKTTCCLYRLWKK 499
Score = 70 (29.7 bits), Expect = 3.9e-61, Sum P(5) = 3.9e-61
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 1140 LRQLFVTVSPKLCFAVKQHISHMKSSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFIDI 1199
L Q+FVT + LC V+++ + ST K + +D + KL+D+ +
Sbjct: 596 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLDPN----IHKLQDLRD----- 643
Query: 1200 PAKSYPLVITFHKFLMMLDGTLCNSYFER 1228
+++PL +T + L++LD +L +F R
Sbjct: 644 --ENFPLFVTSKQLLLLLDASLPKPFFLR 670
Score = 45 (20.9 bits), Expect = 3.9e-61, Sum P(5) = 3.9e-61
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 2412 SSLFTDLHQ--SFGAVYEFIFNIVQQFLYSEKETMEWIKKSCTEIK 2455
S + DL++ ++ E + +V + S ++ +W+ K+ T +K
Sbjct: 2295 SDMVEDLYRRKAWAGAEEAMTRLVNILILSVRDARDWLMKTETRLK 2340
Score = 42 (19.8 bits), Expect = 9.7e-55, Sum P(5) = 9.7e-55
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 167 DTSPT--Y-FKVNATKEIQIDVSKKSLFVIFLINRTSNR-------RIWNSLHM 210
DT+ T Y F+V + ID++ + L I LI R+ R+W H+
Sbjct: 449 DTTATVEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKKFHV 502
Score = 40 (19.1 bits), Expect = 1.2e-51, Sum P(5) = 1.2e-51
Identities = 19/73 (26%), Positives = 30/73 (41%)
Query: 562 FSTASSSYMLHSVAMKPLNFLVIDEAAQLK--------ESESTIPLQLSGIKHAVLFGDE 613
F T+ +L ++ P F + +E LK + ESTIP + A + GD
Sbjct: 649 FVTSKQLLLLLDASL-PKPFFLRNEDGSLKRTIIGWSAQEESTIPSWQEDEEEAEVDGDY 707
Query: 614 CQLPAMVESKVSD 626
+ VE + D
Sbjct: 708 SEEDKAVEMRTGD 720
Score = 39 (18.8 bits), Expect = 3.9e-61, Sum P(5) = 3.9e-61
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 2205 KFLLSSNYSSLQYHAKVLQKFI 2226
K +L NY S +++ L+++I
Sbjct: 1696 KEILKPNYKSFRFYRFALKEYI 1717
Score = 39 (18.8 bits), Expect = 1.9e-52, Sum P(4) = 1.9e-52
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 161 EDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHMKG 212
EDE E + Y + + E++ S ++V F + + IW + KG
Sbjct: 696 EDEEEAEVDGDYSEEDKAVEMRTGDSDPRVYVTFEVFKNE---IWPKM-TKG 743
>UNIPROTKB|F1MVI7 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR014016 InterPro:IPR014017
Pfam:PF13361 PROSITE:PS50293 PROSITE:PS51198 SMART:SM00248
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10
GeneTree:ENSGT00620000088104 EMBL:DAAA02053634 IPI:IPI00710435
Ensembl:ENSBTAT00000028598 Uniprot:F1MVI7
Length = 2871
Score = 647 (232.8 bits), Expect = 2.3e-59, Sum P(4) = 2.3e-59
Identities = 239/895 (26%), Positives = 407/895 (45%)
Query: 1093 GKTTVLIMKLFQKEKLHNMALEGFFGVNNSSQETEAEKDLEKTERVI-LRQLFVTVSPKL 1151
G V + ++E+ EG G + E E ++ ++ L Q+FVT + L
Sbjct: 1046 GSVEVGTVGCLEEEQESEACAEGAGGEPGGPGQGEEEPAPQEPPQLEHLHQIFVTKNHVL 1105
Query: 1152 CFAVKQHISHMKSSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFIDIPAKSYPLVI--T 1209
C V+++ + ST K + ++ + + + L+D N + + +K L++ +
Sbjct: 1106 CQEVQRNFVELSKST---KATSHYKPLEPN-VHKLQDLRD-ENFPLFVTSKQLLLLLDAS 1160
Query: 1210 FHK--FLMMLDGTLCNSYF------ERFHNIWKNYGQLQNSKSVFIE---TI-IRKKE-- 1255
K FL DG+L S E W+ + + + E T+ R +
Sbjct: 1161 LPKPFFLRNEDGSLKRSIVGWSTQEELTITNWQEEEEEAEADGDYSEEEKTVETRPSDSD 1220
Query: 1256 ----VNYERFSSSYWPHFNAQLARKLDPSRVFTEIISHIKGGLQSIEVVNGKLNREDYVN 1311
V +E F + WP + +P+ ++ EI S +KG +++ G+L E Y
Sbjct: 1221 PRVYVTFEVFVNEIWPKM-IKGKTSYNPALIWKEIKSFLKGSFEALSCPGGRLTEEAYKQ 1279
Query: 1312 LSETRNSSLSRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLKEESYKGDEFHFV 1371
L R + ++ R IY +F Y+Q++ G FD D++ +L RL + H +
Sbjct: 1280 LGRKRCPNF-KEDRSEIYGLFCLYQQIRSHKGYFDDEDVLYNLSRRLSKLKVLPWSIHEL 1338
Query: 1372 YIDEVQDLTMSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDIRSLFYKKFVLES 1431
Y DE+QD T +++AL C N +GDTAQ+I +G+ FRF D+RSLF+ S
Sbjct: 1339 YGDEIQDFTQAELALLMK-CINDPNAMFLTGDTAQSIMKGVAFRFSDLRSLFH----YAS 1393
Query: 1432 RNNGNDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHSVDILKPETSLIY 1491
RN D + R+ I L QN+R+H G+LNLA +++LL +FP S D L ++ L
Sbjct: 1394 RN-AVDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFD 1452
Query: 1492 GEPPILLESGDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALV 1551
G PI+LES + + + GN + + FGA QVILV ++ +++I +G ALV
Sbjct: 1453 GPRPIVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEELGL-ALV 1509
Query: 1552 LTIVESKGLEFQDVLLYKFFSASPLKNQWRVVYEYM--------KEQDLLD------STS 1597
LT+ E+KGLEF DVLLY FF+ S +W+++ + + Q +++ S+S
Sbjct: 1510 LTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSGCREESQPMIEVPLDNCSSS 1569
Query: 1598 PGSFPSFNEVKHNILCSELKQLYVAITRTRQRLWIWENKEEFSKPMFDYWKKRFLVQVRR 1657
G + N + +L ELKQLY AITR R LWI++ E P F Y+ KR V+V +
Sbjct: 1570 QGRAVTMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMKRKFVEVVK 1629
Query: 1658 LDDS--LAQAMQV-ASSPEEWKSRGIKVCEIFKKFIIFVCLWLFYEQNYEMATICFEKAK 1714
D++ L +M V S+P EW ++G + + K Q +++A C++K
Sbjct: 1630 TDENKDLDDSMFVKTSTPGEWIAQG----DYYAK-----------HQCWKVAAKCYQKGG 1674
Query: 1715 DTYWEGRSKA--SGLKAAADRISSSNPLEARIILREAAKIFEAIGKVDSAAKCFFDMGEY 1772
E + A + L + ++S E ++ E AK + + KC Y
Sbjct: 1675 ALEKEKLALAHNTALNMKSKKVSLK---EKQVEYLELAKTYLECKEPKLCLKCL----SY 1727
Query: 1773 ERAGTIYLERCEE-PELEKAGECFSLAGCYKLAADVYARGSFLAECLDVCSKGKLFDIGL 1831
+ + + CE ++ A + + CYK A+ + + L + + +LF+
Sbjct: 1728 AKEFQLCAQLCERLGKVRDAAYFYKRSQCYKDASRCFEQIQEFDLALKMYCQEELFEEAA 1787
Query: 1832 QYISYWKQHADTDVGRVKSSKEMKKIEQDFLQSCALHFHKLNDNKSMMKFVRAFHSMDLI 1891
+ +++ V SK Q +L++ A + +N K MM + D +
Sbjct: 1788 MAVEKYEEMLRAKALPV--SKLTYSASQFYLEAAAKYL-SMNKTKEMMAVLSKLDIEDQL 1844
Query: 1892 RNFLNSKGCFDXXXXXXXXXXXFMDAANIARLRGDILRTVDLLQKVGNFKEACNL 1946
FL S+ +AA + + G +L L +F+ +C L
Sbjct: 1845 V-FLTSRKRLTEAADLLNREGRREEAALLMKQHGCLLEAARLTADK-DFQASCLL 1897
Score = 106 (42.4 bits), Expect = 2.3e-59, Sum P(4) = 2.3e-59
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 1033 SNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMI-LFPRST---FILG 1088
S V +MKF+S S + ++L+D A ++ PF V + + +I L PR ++G
Sbjct: 917 SAVETEYNIMKFHSFSTNMASNILNDTTAT-VEYPFRVGELEYAVIGLNPRPLEPIILIG 975
Query: 1089 RSGTGKTTVLIMKLFQK 1105
RSGTGKTT + +L++K
Sbjct: 976 RSGTGKTTCCLYRLWKK 992
Score = 43 (20.2 bits), Expect = 2.3e-59, Sum P(4) = 2.3e-59
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 2416 TDLHQSFGAVYEFIF-NIVQQF 2436
T+LHQ G + E ++ N V+ F
Sbjct: 2833 TELHQEEGVIQEDVYENEVEDF 2854
Score = 38 (18.4 bits), Expect = 2.3e-59, Sum P(4) = 2.3e-59
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 185 VSKKSLFVIFLINRTSNRRIWNSLHMKG-NLK-IIKELLC 222
++KK L+ FL+ R+ +LH+ +LK + ++ +C
Sbjct: 126 LAKKGLWHSFLLLSVKKDRLPRNLHVPDLSLKSLFEKYVC 165
Score = 38 (18.4 bits), Expect = 7.7e-59, Sum P(4) = 7.7e-59
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 2427 EFIFNIVQQFLYSEKETMEWIKKSCTEIKDYHSLV 2461
E + +V + S ++ EW++K TE+ ++
Sbjct: 2810 EVMARLVNILIPSVRDAQEWLRK--TELHQEEGVI 2842
>UNIPROTKB|G3MYJ1 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR014016 InterPro:IPR014017
Pfam:PF13361 PROSITE:PS50293 PROSITE:PS51198 SMART:SM00248
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 OMA:EQHIHLE
GeneTree:ENSGT00620000088104 EMBL:DAAA02053634
Ensembl:ENSBTAT00000065280 Uniprot:G3MYJ1
Length = 2932
Score = 647 (232.8 bits), Expect = 2.6e-59, Sum P(4) = 2.6e-59
Identities = 239/895 (26%), Positives = 407/895 (45%)
Query: 1093 GKTTVLIMKLFQKEKLHNMALEGFFGVNNSSQETEAEKDLEKTERVI-LRQLFVTVSPKL 1151
G V + ++E+ EG G + E E ++ ++ L Q+FVT + L
Sbjct: 1107 GSVEVGTVGCLEEEQESEACAEGAGGEPGGPGQGEEEPAPQEPPQLEHLHQIFVTKNHVL 1166
Query: 1152 CFAVKQHISHMKSSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFIDIPAKSYPLVI--T 1209
C V+++ + ST K + ++ + + + L+D N + + +K L++ +
Sbjct: 1167 CQEVQRNFVELSKST---KATSHYKPLEPN-VHKLQDLRD-ENFPLFVTSKQLLLLLDAS 1221
Query: 1210 FHK--FLMMLDGTLCNSYF------ERFHNIWKNYGQLQNSKSVFIE---TI-IRKKE-- 1255
K FL DG+L S E W+ + + + E T+ R +
Sbjct: 1222 LPKPFFLRNEDGSLKRSIVGWSTQEELTITNWQEEEEEAEADGDYSEEEKTVETRPSDSD 1281
Query: 1256 ----VNYERFSSSYWPHFNAQLARKLDPSRVFTEIISHIKGGLQSIEVVNGKLNREDYVN 1311
V +E F + WP + +P+ ++ EI S +KG +++ G+L E Y
Sbjct: 1282 PRVYVTFEVFVNEIWPKM-IKGKTSYNPALIWKEIKSFLKGSFEALSCPGGRLTEEAYKQ 1340
Query: 1312 LSETRNSSLSRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLKEESYKGDEFHFV 1371
L R + ++ R IY +F Y+Q++ G FD D++ +L RL + H +
Sbjct: 1341 LGRKRCPNF-KEDRSEIYGLFCLYQQIRSHKGYFDDEDVLYNLSRRLSKLKVLPWSIHEL 1399
Query: 1372 YIDEVQDLTMSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDIRSLFYKKFVLES 1431
Y DE+QD T +++AL C N +GDTAQ+I +G+ FRF D+RSLF+ S
Sbjct: 1400 YGDEIQDFTQAELALLMK-CINDPNAMFLTGDTAQSIMKGVAFRFSDLRSLFH----YAS 1454
Query: 1432 RNNGNDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHSVDILKPETSLIY 1491
RN D + R+ I L QN+R+H G+LNLA +++LL +FP S D L ++ L
Sbjct: 1455 RN-AVDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFD 1513
Query: 1492 GEPPILLESGDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALV 1551
G PI+LES + + + GN + + FGA QVILV ++ +++I +G ALV
Sbjct: 1514 GPRPIVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEELGL-ALV 1570
Query: 1552 LTIVESKGLEFQDVLLYKFFSASPLKNQWRVVYEYM--------KEQDLLD------STS 1597
LT+ E+KGLEF DVLLY FF+ S +W+++ + + Q +++ S+S
Sbjct: 1571 LTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSGCREESQPMIEVPLDNCSSS 1630
Query: 1598 PGSFPSFNEVKHNILCSELKQLYVAITRTRQRLWIWENKEEFSKPMFDYWKKRFLVQVRR 1657
G + N + +L ELKQLY AITR R LWI++ E P F Y+ KR V+V +
Sbjct: 1631 QGRAVTMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMKRKFVEVVK 1690
Query: 1658 LDDS--LAQAMQV-ASSPEEWKSRGIKVCEIFKKFIIFVCLWLFYEQNYEMATICFEKAK 1714
D++ L +M V S+P EW ++G + + K Q +++A C++K
Sbjct: 1691 TDENKDLDDSMFVKTSTPGEWIAQG----DYYAK-----------HQCWKVAAKCYQKGG 1735
Query: 1715 DTYWEGRSKA--SGLKAAADRISSSNPLEARIILREAAKIFEAIGKVDSAAKCFFDMGEY 1772
E + A + L + ++S E ++ E AK + + KC Y
Sbjct: 1736 ALEKEKLALAHNTALNMKSKKVSLK---EKQVEYLELAKTYLECKEPKLCLKCL----SY 1788
Query: 1773 ERAGTIYLERCEE-PELEKAGECFSLAGCYKLAADVYARGSFLAECLDVCSKGKLFDIGL 1831
+ + + CE ++ A + + CYK A+ + + L + + +LF+
Sbjct: 1789 AKEFQLCAQLCERLGKVRDAAYFYKRSQCYKDASRCFEQIQEFDLALKMYCQEELFEEAA 1848
Query: 1832 QYISYWKQHADTDVGRVKSSKEMKKIEQDFLQSCALHFHKLNDNKSMMKFVRAFHSMDLI 1891
+ +++ V SK Q +L++ A + +N K MM + D +
Sbjct: 1849 MAVEKYEEMLRAKALPV--SKLTYSASQFYLEAAAKYL-SMNKTKEMMAVLSKLDIEDQL 1905
Query: 1892 RNFLNSKGCFDXXXXXXXXXXXFMDAANIARLRGDILRTVDLLQKVGNFKEACNL 1946
FL S+ +AA + + G +L L +F+ +C L
Sbjct: 1906 V-FLTSRKRLTEAADLLNREGRREEAALLMKQHGCLLEAARLTADK-DFQASCLL 1958
Score = 106 (42.4 bits), Expect = 2.6e-59, Sum P(4) = 2.6e-59
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 1033 SNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMI-LFPRST---FILG 1088
S V +MKF+S S + ++L+D A ++ PF V + + +I L PR ++G
Sbjct: 978 SAVETEYNIMKFHSFSTNMASNILNDTTAT-VEYPFRVGELEYAVIGLNPRPLEPIILIG 1036
Query: 1089 RSGTGKTTVLIMKLFQK 1105
RSGTGKTT + +L++K
Sbjct: 1037 RSGTGKTTCCLYRLWKK 1053
Score = 43 (20.2 bits), Expect = 2.6e-59, Sum P(4) = 2.6e-59
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 2416 TDLHQSFGAVYEFIF-NIVQQF 2436
T+LHQ G + E ++ N V+ F
Sbjct: 2894 TELHQEEGVIQEDVYENEVEDF 2915
Score = 38 (18.4 bits), Expect = 2.6e-59, Sum P(4) = 2.6e-59
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 185 VSKKSLFVIFLINRTSNRRIWNSLHMKG-NLK-IIKELLC 222
++KK L+ FL+ R+ +LH+ +LK + ++ +C
Sbjct: 133 LAKKGLWHSFLLLSVKKDRLPRNLHVPDLSLKSLFEKYVC 172
Score = 38 (18.4 bits), Expect = 8.7e-59, Sum P(4) = 8.7e-59
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 2427 EFIFNIVQQFLYSEKETMEWIKKSCTEIKDYHSLV 2461
E + +V + S ++ EW++K TE+ ++
Sbjct: 2871 EVMARLVNILIPSVRDAQEWLRK--TELHQEEGVI 2903
>UNIPROTKB|O15050 [details] [associations]
symbol:TRANK1 "TPR and ankyrin repeat-containing protein 1"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361 PROSITE:PS50005
PROSITE:PS50088 PROSITE:PS50293 SMART:SM00248 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 EMBL:AC011816
EMBL:AC097360 EMBL:AC105749 EMBL:AB002340 EMBL:AK096678
IPI:IPI00847543 RefSeq:NP_055646.2 UniGene:Hs.170999
ProteinModelPortal:O15050 SMR:O15050 IntAct:O15050
PhosphoSite:O15050 PaxDb:O15050 PRIDE:O15050
Ensembl:ENST00000429976 GeneID:9881 KEGG:hsa:9881 UCSC:uc003cgj.3
CTD:9881 GeneCards:GC03M036845 H-InvDB:HIX0003166 HGNC:HGNC:29011
HPA:HPA035508 neXtProt:NX_O15050 PharmGKB:PA165698606
eggNOG:NOG67722 HOGENOM:HOG000168939 HOVERGEN:HBG108082 OMA:EQHIHLE
OrthoDB:EOG46Q6RM ChiTaRS:TRANK1 GenomeRNAi:9881 NextBio:37241
ArrayExpress:O15050 Bgee:O15050 Genevestigator:O15050
Uniprot:O15050
Length = 2925
Score = 640 (230.4 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 205/709 (28%), Positives = 334/709 (47%)
Query: 1256 VNYERFSSSYWPHFNAQLARKLDPSRVFTEIISHIKGGLQSIEVVNGKLNREDYVNLSET 1315
V +E F + WP +P+ ++ EI S +KG +++ +G+L E Y L
Sbjct: 1277 VTFEVFKNEIWPKMTKGRTA-YNPALIWKEIKSFLKGSFEALSCPHGRLTEEVYKKLGRK 1335
Query: 1316 RNSSLSRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLKEESYKGDEFHFVYIDE 1375
R + ++ R IY +F Y+Q++ + G FD D++ ++ RL + H +Y DE
Sbjct: 1336 RCPNF-KEDRSEIYSLFSLYQQIRSQKGYFDEEDVLYNISRRLSKLRVLPWSIHELYGDE 1394
Query: 1376 VQDLTMSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDIRSLFYKKFVLESRNNG 1435
+QD T +++AL C N +GDTAQ+I +G+ FRF D+RSLF+ SRN
Sbjct: 1395 IQDFTQAELALLMK-CINDPNSMFLTGDTAQSIMKGVAFRFSDLRSLFH----YASRNT- 1448
Query: 1436 NDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHSVDILKPETSLIYGEPP 1495
D + R+ I L QN+R+H G+LNLA +++LL +FP S D L ++ L G P
Sbjct: 1449 IDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPKP 1508
Query: 1496 ILLESGDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIV 1555
+LES + + + GN + + FGA QVILV ++ +++I +G ALVLTI
Sbjct: 1509 TVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANETAKEKIPEELGL-ALVLTIY 1565
Query: 1556 ESKGLEFQDVLLYKFFSASPLKNQWRVVYEYM------KEQDL------LDS--TSPGSF 1601
E+KGLEF DVLLY FF+ S +W+++ + +E++ LD +S G
Sbjct: 1566 EAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPTSTDSREENRPLVEVPLDKPGSSQGRS 1625
Query: 1602 PSFNEVKHNILCSELKQLYVAITRTRQRLWIWENKEEFSKPMFDYWKKRFLVQVRRLDDS 1661
N + +L ELKQLY AITR R LWI++ E P F Y+ +R VQV + D++
Sbjct: 1626 LMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENREKRAPAFKYFIRRDFVQVVKTDEN 1685
Query: 1662 --LAQAMQV-ASSPEEWKSRGIKVCEIFKKFIIFVCLWLFYEQNYEMATICFEKAKDTYW 1718
+M V S+P EW ++G + + K C W + Y+ FEK K
Sbjct: 1686 KDFDDSMFVKTSTPAEWIAQG----DYYAKH---QC-WKVAAKCYQKGG-AFEKEKLAL- 1735
Query: 1719 EGRSKASGLKAAADRISSSNPLEARIILREAAKIFEAIGKVDSAAKCFFDMGEYERAGTI 1778
A +K+ ++S P E ++ E AK + + + KC E++ + +
Sbjct: 1736 -AHDTALSMKSK--KVS---PKEKQLEYLELAKTYLECKEPTLSLKCLSYAKEFQLSAQL 1789
Query: 1779 YLERCEE-PELEKAGECFSLAGCYKLAADVYARGSFLAECLDVCSKGKLFDIGLQYISYW 1837
CE ++ A + + CYK A + + L + + +LF+ + +
Sbjct: 1790 ----CERLGKIRDAAYFYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFEEAAIAVEKY 1845
Query: 1838 KQHADTDVGRVKSSKEMKKIEQDFLQSCALHFHKLNDNKSMMKFVRAFHSMDLIRNFLNS 1897
++ T + SK Q +L++ A + N K MM + D + FL S
Sbjct: 1846 EEMLKTKT--LPISKLSYSASQFYLEAAAKYL-SANKMKEMMAVLSKLDIEDQLV-FLKS 1901
Query: 1898 KGCFDXXXXXXXXXXXFMDAANIARLRGDILRTVDLLQKVGNFKEACNL 1946
+ +AA + + G +L L +F+ +C L
Sbjct: 1902 RKRLAEAADLLNREGRREEAALLMKQHGCLLEAARLTADK-DFQASCLL 1949
Score = 104 (41.7 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 1033 SNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMI-LFPRST---FILG 1088
S V +MKF+S S + ++L+D A ++ PF V + + +I L PR ++G
Sbjct: 974 SAVETEYNIMKFHSFSTNMAFNILNDTTAT-VEYPFRVGELEYAVIDLNPRPLEPIILIG 1032
Query: 1089 RSGTGKTTVLIMKLFQK 1105
RSGTGKTT + +L++K
Sbjct: 1033 RSGTGKTTCCLYRLWKK 1049
Score = 70 (29.7 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 1140 LRQLFVTVSPKLCFAVKQHISHMKSSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFIDI 1199
L Q+FVT + LC V+++ + ST K + +D + KL+D+ +
Sbjct: 1146 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLDPN----IHKLQDLRD----- 1193
Query: 1200 PAKSYPLVITFHKFLMMLDGTLCNSYFER 1228
+++PL +T + L++LD +L +F R
Sbjct: 1194 --ENFPLFVTSKQLLLLLDASLPKPFFLR 1220
Score = 45 (20.9 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 2412 SSLFTDLHQ--SFGAVYEFIFNIVQQFLYSEKETMEWIKKSCTEIK 2455
S + DL++ ++ E + +V + S ++ +W+ K+ T +K
Sbjct: 2845 SDMVEDLYRRKAWAGAEEAMTRLVNILILSVRDARDWLMKTETRLK 2890
Score = 42 (19.8 bits), Expect = 4.4e-54, Sum P(5) = 4.4e-54
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 167 DTSPT--Y-FKVNATKEIQIDVSKKSLFVIFLINRTSNR-------RIWNSLHM 210
DT+ T Y F+V + ID++ + L I LI R+ R+W H+
Sbjct: 999 DTTATVEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKKFHV 1052
Score = 40 (19.1 bits), Expect = 5.4e-51, Sum P(5) = 5.4e-51
Identities = 19/73 (26%), Positives = 30/73 (41%)
Query: 562 FSTASSSYMLHSVAMKPLNFLVIDEAAQLK--------ESESTIPLQLSGIKHAVLFGDE 613
F T+ +L ++ P F + +E LK + ESTIP + A + GD
Sbjct: 1199 FVTSKQLLLLLDASL-PKPFFLRNEDGSLKRTIIGWSAQEESTIPSWQEDEEEAEVDGDY 1257
Query: 614 CQLPAMVESKVSD 626
+ VE + D
Sbjct: 1258 SEEDKAVEMRTGD 1270
Score = 39 (18.8 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 2205 KFLLSSNYSSLQYHAKVLQKFI 2226
K +L NY S +++ L+++I
Sbjct: 2246 KEILKPNYKSFRFYRFALKEYI 2267
Score = 39 (18.8 bits), Expect = 6.4e-52, Sum P(4) = 6.4e-52
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 161 EDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHMKG 212
EDE E + Y + + E++ S ++V F + + IW + KG
Sbjct: 1246 EDEEEAEVDGDYSEEDKAVEMRTGDSDPRVYVTFEVFKNE---IWPKM-TKG 1293
Score = 38 (18.4 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 359 NESMKQSEDINGDIIKEKECGKE 381
N++ K E IN + K C K+
Sbjct: 291 NKNFKAIEKINSHLEKLATCSKD 313
Score = 37 (18.1 bits), Expect = 3.7e-59, Sum P(6) = 3.7e-59
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 196 INRTSNRRIWNSLHMKGNLKIIKELL 221
+ ++ + + L KG LK +K+LL
Sbjct: 542 VQDSNGNTLMHILFQKGMLKRVKKLL 567
>MGI|MGI:1341834 [details] [associations]
symbol:Trank1 "tetratricopeptide repeat and ankyrin repeat
containing 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014017
Pfam:PF13361 PROSITE:PS50005 PROSITE:PS50088 PROSITE:PS50293
SMART:SM00248 MGI:MGI:1341834 GO:GO:0005524 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016787
Gene3D:1.25.40.10 CTD:9881 HOVERGEN:HBG108082 OMA:EQHIHLE
OrthoDB:EOG46Q6RM EMBL:AC126677 EMBL:AC113495 EMBL:BC086653
EMBL:AK079552 EMBL:AK129119 IPI:IPI00848384 IPI:IPI00944738
RefSeq:NP_001158131.1 UniGene:Mm.270754 ProteinModelPortal:Q8BV79
SMR:Q8BV79 PhosphoSite:Q8BV79 PRIDE:Q8BV79
Ensembl:ENSMUST00000078626 GeneID:320429 KEGG:mmu:320429
UCSC:uc009rvt.2 UCSC:uc009rvu.1 eggNOG:NOG148247
GeneTree:ENSGT00620000088104 InParanoid:Q8BV79 NextBio:396696
Bgee:Q8BV79 Genevestigator:Q8BV79 Uniprot:Q8BV79
Length = 2999
Score = 631 (227.2 bits), Expect = 4.6e-58, Sum P(4) = 4.6e-58
Identities = 224/844 (26%), Positives = 385/844 (45%)
Query: 1140 LRQLFVTVSPKLCFAVKQHISHMKSSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFIDI 1199
L Q+FVT + LC V+++ + ST K + +D + + + L+D N + +
Sbjct: 1220 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLDPN-VHKLQDLRD-ENFPLFV 1274
Query: 1200 PAKSYPLVI--TFHK--FLMMLDGTLCNSYF-----ERFH-NIWK----------NYGQL 1239
+K L++ + K FL DG+L + E F W+ NY +
Sbjct: 1275 TSKQLLLLLDASLPKPFFLRNEDGSLKRTIVGWSTQEEFSIPSWEEDDEEVEADGNYNEE 1334
Query: 1240 QNSKSVFIETIIRKKEVNYERFSSSYWPHFNAQLARKLDPSRVFTEIISHIKGGLQSIEV 1299
+ + + V +E F++ WP + +P+ ++ EI S +KG +++
Sbjct: 1335 EKATETQTGDSDPRVYVTFEVFTNEIWPKM-IKGRSSYNPALIWKEIKSFLKGSFEALSC 1393
Query: 1300 VNGKLNREDYVNLSETRNSSLSRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLK 1359
+G+L E Y L R+ + ++ R IY +F Y+Q++ + G FD D++ +L RL
Sbjct: 1394 PHGRLTEEAYKKLGRKRSPNF-KEDRSEIYSLFCLYQQIRSQKGYFDEEDVLYNLSWRLS 1452
Query: 1360 EESYKGDEFHFVYIDEVQDLTMSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDI 1419
+ H +Y DE+QD T +++AL C N +GDTAQ+I +G+ FRF D+
Sbjct: 1453 KLRVLPWSIHELYGDEIQDFTQAELALLMK-CINDPNAMFLTGDTAQSIMKGVAFRFSDL 1511
Query: 1420 RSLFYKKFVLESRNNGNDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHS 1479
SLF+ SR+ D + R+ I L QN+R+H G+LNLA +++LL +FP S
Sbjct: 1512 LSLFH----YASRSTV-DKQCAVRKPKRIHQLYQNYRSHSGILNLASGVVDLLQFYFPES 1566
Query: 1480 VDILKPETSLIYGEPPILLESGDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRK 1539
D L ++ L G P LL+S + + + GN + + FGA QVILV ++ ++
Sbjct: 1567 FDRLPRDSGLFDGPKPTLLDSCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEKAKE 1624
Query: 1540 EISNYVGKQALVLTIVESKGLEFQDVLLYKFFSASPLKNQWRVVYEYMKEQDL------- 1592
+I +G ALVLT+ E+KGLEF DVLLY FF+ S +W+++ + D
Sbjct: 1625 KIPEELGL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSDSREEKWPL 1683
Query: 1593 ----LDSTSPGSFPSF--NEVKHNILCSELKQLYVAITRTRQRLWIWENKEEFSKPMFDY 1646
L+ +SP S N + +L ELKQLY AITR R LWI++ E P F Y
Sbjct: 1684 VDVPLERSSPSQARSLMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENLEKRAPAFKY 1743
Query: 1647 WKKRFLVQVRRLDDS--LAQAMQV-ASSPEEWKSRGIKVCEIFKKFIIFVCLWLFYEQNY 1703
+ +R VQV + D++ +M V S+P EW +G + + K Q +
Sbjct: 1744 FIRRDFVQVVKTDENKDFDDSMFVKTSTPYEWIIQG----DYYAK-----------HQCW 1788
Query: 1704 EMATICFEKAKDTYWEGRSKASGLKAAADRISSSNPLEARIILREAAKIFEAIGKVDSAA 1763
++A C++K D + + + A + +P E + E AK + + +
Sbjct: 1789 KVAAKCYQKG-DALEKEKLALAHYTALNMKSKKFSPKEKELQYLELAKTYLECNEPKLSL 1847
Query: 1764 KCFFDMGEYERAGTIYLERCEE-PELEKAGECFSLAGCYKLAADVYARGSFLAECLDVCS 1822
KC E++ + + CE ++ A + + C++ A + + L +
Sbjct: 1848 KCLSYAKEFQLSAQL----CERLGKIRDAAYFYKRSQCFQDAFRCFEQIQEFDLALRMYC 1903
Query: 1823 KGKLFDIGLQYISYWKQHADTDVGRVKSSKEMKKIEQDFLQSCALHFHKLNDNKSMMKFV 1882
+ +LF+ + +++ + K Q +L++ A + N +K MM +
Sbjct: 1904 QEELFEEAAIAVEKYEEMLKNKTFPIP--KLSYSASQFYLEAAAKYL-SANKSKEMMAVL 1960
Query: 1883 RAFHSMDLIRNFLNSKGCFDXXXXXXXXXXXFMDAANIARLRGDILRTVDLLQKVGNFKE 1942
D + FL S+ C +AA + + G +L L +F+
Sbjct: 1961 SKLDVEDQLV-FLKSRKCLAEAAELLNREGRREEAALLMKQHGCLLEAARLTANK-DFQA 2018
Query: 1943 ACNL 1946
+C L
Sbjct: 2019 SCLL 2022
Score = 103 (41.3 bits), Expect = 4.6e-58, Sum P(4) = 4.6e-58
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 1033 SNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMI-LFPRST---FILG 1088
S V +MKF+S S + ++L+D A ++ PF V + + +I L P+ ++G
Sbjct: 1050 SAVETEYSIMKFHSFSTNMALNILNDMTAT-VEYPFRVGELEYAVIDLNPKPLEPIILIG 1108
Query: 1089 RSGTGKTTVLIMKLFQK 1105
RSGTGKTT + +L++K
Sbjct: 1109 RSGTGKTTCCLYRLWKK 1125
Score = 47 (21.6 bits), Expect = 4.6e-58, Sum P(4) = 4.6e-58
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 2412 SSLFTDLHQ--SFGAVYEFIFNIVQQFLYSEKETMEWIKKSCTEIKD 2456
S L +L++ ++ E + V+ S K EW+KK+ +KD
Sbjct: 2919 SDLVEELYRRKAWAEAEEVMTQQVKILTLSVKNAQEWLKKTELRLKD 2965
Score = 46 (21.3 bits), Expect = 3.8e-52, Sum P(4) = 3.8e-52
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 164 NEIDTSPTY-FKVNATKEIQIDVSKKSLFVIFLINRTSNR-------RIWNSLHM 210
N++ + Y F+V + ID++ K L I LI R+ R+W H+
Sbjct: 1074 NDMTATVEYPFRVGELEYAVIDLNPKPLEPIILIGRSGTGKTTCCLYRLWKKFHV 1128
Score = 42 (19.8 bits), Expect = 4.6e-58, Sum P(4) = 4.6e-58
Identities = 13/37 (35%), Positives = 14/37 (37%)
Query: 112 RNRFSNLGREPYKTLPGDILVLADAKPETASDLQRVG 148
R R S G P PG L +A P L R G
Sbjct: 13 RRRSSRRGPTPRSRAPGAKLSAPEAGPPRRGPLPRGG 49
>RGD|1563130 [details] [associations]
symbol:Trank1 "tetratricopeptide repeat and ankyrin repeat
containing 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR002110 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR014017 Pfam:PF13361 PROSITE:PS50088
PROSITE:PS50293 SMART:SM00248 RGD:1563130 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 CTD:9881
OrthoDB:EOG46Q6RM GeneTree:ENSGT00620000088104 IPI:IPI00563535
RefSeq:NP_001178728.1 UniGene:Rn.228178 Ensembl:ENSRNOT00000028633
GeneID:316022 KEGG:rno:316022 UCSC:RGD:1563130 NextBio:670315
Uniprot:D3ZSG2
Length = 2998
Score = 640 (230.4 bits), Expect = 2.6e-57, Sum P(5) = 2.6e-57
Identities = 227/844 (26%), Positives = 387/844 (45%)
Query: 1140 LRQLFVTVSPKLCFAVKQHISHMKSSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFIDI 1199
L Q+FVT + LC V+++ + ST K + +D + + + L+D N + +
Sbjct: 1218 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLDPN-VHKLQDLRD-ENFPLFV 1272
Query: 1200 PAKSYPLVI--TFHK--FLMMLDGTLCNSYF-----ERFH-NIWK----------NYGQL 1239
+K L++ + K FL DG+L + E F W+ NY +
Sbjct: 1273 TSKQLLLLLDASLPKPFFLRNEDGSLKRTIVGWSTQEEFSIPSWEEDEDEVEADGNYSEE 1332
Query: 1240 QNSKSVFIETIIRKKEVNYERFSSSYWPHFNAQLARKLDPSRVFTEIISHIKGGLQSIEV 1299
+ + + V +E F++ WP + +P+ ++ EI S +KG +++
Sbjct: 1333 EKTTETQTGDSDPRVYVTFEVFTNEIWPKM-IKGRSSYNPALIWKEIKSFLKGSFEALSC 1391
Query: 1300 VNGKLNREDYVNLSETRNSSLSRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLK 1359
+G+L E Y L R+ + ++ R IY +F Y+Q++ + G FD D++ +L RL
Sbjct: 1392 PHGRLTEEAYQKLGRKRSPNF-KEDRSEIYSLFCLYQQIRSQKGYFDEEDVLYNLSWRLS 1450
Query: 1360 EESYKGDEFHFVYIDEVQDLTMSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDI 1419
+ H +Y DE+QD T +++AL C N +GDTAQ+I +G+ FRF D+
Sbjct: 1451 KLRVLPWSIHELYGDEIQDFTQAELALLMK-CINDPNAMFLTGDTAQSIMKGVAFRFSDL 1509
Query: 1420 RSLFYKKFVLESRNNGNDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHS 1479
SLF+ SRN D + R+ I L QN+R+H G+LNLA +++LL +FP S
Sbjct: 1510 LSLFH----YASRNTV-DKQCAVRKPKRIHQLYQNYRSHSGILNLASGVVDLLQFYFPES 1564
Query: 1480 VDILKPETSLIYGEPPILLESGDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRK 1539
D L ++ L G P LL+S + + + GN + + FGA QVILV ++ ++
Sbjct: 1565 FDRLPRDSGLFDGPKPTLLDSCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKE 1622
Query: 1540 EISNYVGKQALVLTIVESKGLEFQDVLLYKFFSASPLKNQWRVVYEYMKEQD-------L 1592
+I +G ALVLT+ E+KGLEF DVLLY FF+ S +W+++ ++ D L
Sbjct: 1623 KIPEELGL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFIPSSDSREENCPL 1681
Query: 1593 LD------STSPGSFPSFNEVKHNILCSELKQLYVAITRTRQRLWIWENKEEFSKPMFDY 1646
LD S+S N + +L ELKQLY AITR R LWI++ E P F Y
Sbjct: 1682 LDVPLEKSSSSQARSLMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENLEKRAPAFKY 1741
Query: 1647 WKKRFLVQVRRLDDS--LAQAMQV-ASSPEEWKSRGIKVCEIFKKFIIFVCLWLFYEQNY 1703
+ +R VQV + D++ +M V S+P+EW +G + + K Q +
Sbjct: 1742 FIRRDFVQVVKTDENKDFDDSMFVKTSTPDEWIIQG----DYYAK-----------HQCW 1786
Query: 1704 EMATICFEKAKDTYWEGRSKASGLKAAADRISSSNPLEARIILREAAKIFEAIGKVDSAA 1763
++A C++K D + + + + A + +P E + E AK + + +
Sbjct: 1787 KVAAKCYQKG-DAFEKEKLALAHYTALNMKSKKFSPKEKELQYLELAKTYLECNEPKLSL 1845
Query: 1764 KCFFDMGEYERAGTIYLERCEE-PELEKAGECFSLAGCYKLAADVYARGSFLAECLDVCS 1822
KC E++ + + CE ++ A + + C+K A + + L +
Sbjct: 1846 KCLSYAKEFQLSAQL----CERLGKIRDAAYFYKRSQCFKDAFRCFEQIQEFDLALRMYC 1901
Query: 1823 KGKLFDIGLQYISYWKQHADTDVGRVKSSKEMKKIEQDFLQSCALHFHKLNDNKSMMKFV 1882
+ +LF+ + +++ V K Q +L++ A + N +K MM +
Sbjct: 1902 QEELFEEAAIAVEKYEEMLKNKTFPVP--KLSYSASQFYLEAAAKYL-SANKSKEMMAVL 1958
Query: 1883 RAFHSMDLIRNFLNSKGCFDXXXXXXXXXXXFMDAANIARLRGDILRTVDLLQKVGNFKE 1942
D + FL S+ +AA + + G +L L +F+
Sbjct: 1959 SKLDVEDQLV-FLKSRKRLAEAAELLNREGRKEEAALLMKQHGCLLEAARLTANK-DFQA 2016
Query: 1943 ACNL 1946
+C L
Sbjct: 2017 SCLL 2020
Score = 102 (41.0 bits), Expect = 2.6e-57, Sum P(5) = 2.6e-57
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 1033 SNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMI-LFPRST---FILG 1088
S V +MKF+S S + ++L+D A ++ PF V + + +I L P+ ++G
Sbjct: 1049 SAVETEYNIMKFHSFSTSMALNILNDMTAT-VEYPFRVGELEYAVIDLNPKPLEPIILIG 1107
Query: 1089 RSGTGKTTVLIMKLFQK 1105
RSGTGKTT + +L++K
Sbjct: 1108 RSGTGKTTCCLYRLWKK 1124
Score = 47 (21.6 bits), Expect = 2.6e-57, Sum P(5) = 2.6e-57
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 2412 SSLFTDLHQ--SFGAVYEFIFNIVQQFLYSEKETMEWIKKSCTEIKD 2456
S L +L++ ++ E + V+ S K EW+KK+ +KD
Sbjct: 2918 SDLVEELYRRKAWAEAEEVMTRQVKILTLSVKNAQEWLKKTELRLKD 2964
Score = 46 (21.3 bits), Expect = 4.2e-53, Sum P(4) = 4.2e-53
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 164 NEIDTSPTY-FKVNATKEIQIDVSKKSLFVIFLINRTSNR-------RIWNSLHM 210
N++ + Y F+V + ID++ K L I LI R+ R+W H+
Sbjct: 1073 NDMTATVEYPFRVGELEYAVIDLNPKPLEPIILIGRSGTGKTTCCLYRLWKKFHV 1127
Score = 42 (19.8 bits), Expect = 2.6e-57, Sum P(5) = 2.6e-57
Identities = 13/37 (35%), Positives = 14/37 (37%)
Query: 112 RNRFSNLGREPYKTLPGDILVLADAKPETASDLQRVG 148
R R S G P PG L +A P L R G
Sbjct: 13 RRRSSRRGPTPRSRAPGAKLSAPEAGPPRRGPLPRGG 49
Score = 37 (18.1 bits), Expect = 2.6e-57, Sum P(5) = 2.6e-57
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 171 TYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHM 210
T F + + ++KK L+ FL+ R+ +++H+
Sbjct: 248 TGFSTEVWQSVIQKLAKKGLWHSFLLLSAKKDRLPSNIHV 287
>UNIPROTKB|F1PCE7 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361 PROSITE:PS50293
SMART:SM00248 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10
GeneTree:ENSGT00620000088104 EMBL:AAEX03013477
Ensembl:ENSCAFT00000036550 Uniprot:F1PCE7
Length = 2935
Score = 627 (225.8 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 178/564 (31%), Positives = 286/564 (50%)
Query: 1256 VNYERFSSSYWPHFNAQLARKLDPSRVFTEIISHIKGGLQSIEVVNGKLNREDYVNLSET 1315
V +E F++ WP + +P+ ++ EI S +KG +++ G+L E Y L
Sbjct: 1291 VTFEVFTNEIWPKM-IKGKTSYNPALIWKEIKSFLKGSFEALSCPQGRLTEEAYKKLGRK 1349
Query: 1316 RNSSLSRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLKEESYKGDEFHFVYIDE 1375
R+ + ++ R IY +F Y+Q++ + G FD D++ +L RL H +Y DE
Sbjct: 1350 RSPNF-KEDRSEIYSLFCLYQQIRSQKGYFDEEDVLYNLSRRLSRLKVLPWSIHELYGDE 1408
Query: 1376 VQDLTMSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDIRSLFYKKFVLESRNNG 1435
+QD T +++AL C N +GDTAQ+I +G+ FRF D+RSLF+ SR+
Sbjct: 1409 IQDFTQAELALLMK-CINDPNAMFLTGDTAQSIMKGVAFRFSDLRSLFH----YASRSTV 1463
Query: 1436 NDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHSVDILKPETSLIYGEPP 1495
D + R+ I L QN+R+H G+LNLA +++LL +FP S D L ++ L G P
Sbjct: 1464 -DKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPKP 1522
Query: 1496 ILLESGDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIV 1555
+LES + + + GN + + FGA QVILV ++ +++I +G ALVLT+
Sbjct: 1523 TVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEELGL-ALVLTVY 1579
Query: 1556 ESKGLEFQDVLLYKFFSASPLKNQWRVVYEYM-------KEQ-DLLD------STSPGSF 1601
E+KGLEF DVLLY FF+ S +W+++ + KE L++ S+S G
Sbjct: 1580 EAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSDSRKENWPLIEVPLEKSSSSQGRS 1639
Query: 1602 PSFNEVKHNILCSELKQLYVAITRTRQRLWIWENKEEFSKPMFDYWKKRFLVQVRRLDDS 1661
N + +L ELKQLY AITR R LWI++ E P F Y+ +R VQV + D++
Sbjct: 1640 LMMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMRRDFVQVVKTDEN 1699
Query: 1662 --LAQAMQV-ASSPEEWKSRGIKVCEIFKKFIIFVCLWLFYEQNYEMATICFEKAKDTYW 1718
+M V S+PEEW ++G + + K C W + Y+ FEK K
Sbjct: 1700 KDFDDSMFVKTSTPEEWIAQG----DYYAKH---QC-WKVAAKCYQKGG-AFEKEKLAL- 1749
Query: 1719 EGRSKASGLKAAADRISSSNPLEARIILREAAKIFEAIGKVDSAAKCFFDMGEYERAGTI 1778
+ A +K+ ++S P E ++ E A+ + + + KC E++ + +
Sbjct: 1750 -AHNTALNMKSK--KVS---PKEKQMEYLELARTYLECKEPKLSLKCLSYAKEFQLSAQL 1803
Query: 1779 YLERCEEPELEKAGECFSLAGCYK 1802
E+ + + A + + CYK
Sbjct: 1804 -CEKLGK--IRDAAYFYKRSQCYK 1824
Score = 103 (41.3 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 1033 SNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMI-LFPRST---FILG 1088
S V +MKF+S S + ++LSD ++ PF V + + +I L PR ++G
Sbjct: 984 SAVETEYNIMKFHSFSTSMAFNILSDTTTT-VEYPFRVGELEYAVIDLNPRPLEPIILIG 1042
Query: 1089 RSGTGKTTVLIMKLFQK 1105
RSGTGKTT + +L++K
Sbjct: 1043 RSGTGKTTCCLYRLWKK 1059
Score = 67 (28.6 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 23/89 (25%), Positives = 45/89 (50%)
Query: 1140 LRQLFVTVSPKLCFAVKQHISHMKSSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFIDI 1199
L Q+FVT + LC V+++ + ST K + ++ + KL+D+ +
Sbjct: 1160 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLEPN----VHKLQDLRD----- 1207
Query: 1200 PAKSYPLVITFHKFLMMLDGTLCNSYFER 1228
+++PL +T + L++LD +L +F R
Sbjct: 1208 --ENFPLFVTSKQLLLLLDASLPKPFFLR 1234
Score = 48 (22.0 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 1746 LREAAKIFEAIGKVDSAAKCFFDMGEYERAGTIYLERCEEPELEKA 1791
+R+AA ++ A +CF + E++ A +Y C+E E+A
Sbjct: 1810 IRDAAYFYKRSQCYKDAFRCFEQIQEFDLALKMY---CQEELFEEA 1852
Score = 42 (19.8 bits), Expect = 3.7e-56, Sum P(7) = 3.7e-56
Identities = 37/183 (20%), Positives = 75/183 (40%)
Query: 1771 EYERAGTIYLERCEEPELEKAGECFSLAGCYKLAADVYARGSFLAECL-----DVCSKG- 1824
EY YLE C+EP+L +C S A ++L+A + + + + C K
Sbjct: 1770 EYLELARTYLE-CKEPKLSL--KCLSYAKEFQLSAQLCEKLGKIRDAAYFYKRSQCYKDA 1826
Query: 1825 -KLFDIGLQYISYWKQHADTDVGRVKSSKEMKKIEQDFLQSCALHFHKLNDNKSMMKFVR 1883
+ F+ ++ K + ++ +++ ++K E+ L++ L KL+ + S
Sbjct: 1827 FRCFEQIQEFDLALKMYCQEELFE-EAAIAVEKYEE-MLRAKTLPISKLSYSASQ----- 1879
Query: 1884 AFHSMDLIRNFLNSKGCFDXXXXXXXXXXXFMDAANIARLRGDILRTVDLLQKVGNFKEA 1943
F+ ++ +L++ + D + RG + DLL + G +EA
Sbjct: 1880 -FY-LEAAAKYLSANKIKEMMAVLSKLDIE--DQLVFLKSRGRLAEAADLLNREGRREEA 1935
Query: 1944 CNL 1946
L
Sbjct: 1936 ALL 1938
Score = 42 (19.8 bits), Expect = 1.3e-51, Sum P(6) = 1.3e-51
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 167 DTSPT--Y-FKVNATKEIQIDVSKKSLFVIFLINRTSNR-------RIWNSLHM 210
DT+ T Y F+V + ID++ + L I LI R+ R+W H+
Sbjct: 1009 DTTTTVEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKKFHI 1062
Score = 41 (19.5 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 2427 EFIFNIVQQFLYSEKETMEWIKKSCTEIKD 2456
E + +V + S ++ EW+ K+ +K+
Sbjct: 2872 EVMARLVNSLIPSVRDAQEWLMKTELHLKE 2901
Score = 37 (18.1 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 2205 KFLLSSNYSSLQYHAKVLQKFI 2226
K +L NY S + + L+++I
Sbjct: 2260 KDILKPNYKSFRSYRSALKEYI 2281
Score = 37 (18.1 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 359 NESMKQSEDINGDIIKEKECGKE 381
N++ K E IN + K C K+
Sbjct: 293 NKNFKAIEKINSHLEKLAVCSKD 315
>UNIPROTKB|F1PD19 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361 PROSITE:PS50293
SMART:SM00248 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10
GeneTree:ENSGT00620000088104 EMBL:AAEX03013477
Ensembl:ENSCAFT00000007678 Uniprot:F1PD19
Length = 2936
Score = 627 (225.8 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 178/564 (31%), Positives = 286/564 (50%)
Query: 1256 VNYERFSSSYWPHFNAQLARKLDPSRVFTEIISHIKGGLQSIEVVNGKLNREDYVNLSET 1315
V +E F++ WP + +P+ ++ EI S +KG +++ G+L E Y L
Sbjct: 1292 VTFEVFTNEIWPKM-IKGKTSYNPALIWKEIKSFLKGSFEALSCPQGRLTEEAYKKLGRK 1350
Query: 1316 RNSSLSRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLKEESYKGDEFHFVYIDE 1375
R+ + ++ R IY +F Y+Q++ + G FD D++ +L RL H +Y DE
Sbjct: 1351 RSPNF-KEDRSEIYSLFCLYQQIRSQKGYFDEEDVLYNLSRRLSRLKVLPWSIHELYGDE 1409
Query: 1376 VQDLTMSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDIRSLFYKKFVLESRNNG 1435
+QD T +++AL C N +GDTAQ+I +G+ FRF D+RSLF+ SR+
Sbjct: 1410 IQDFTQAELALLMK-CINDPNAMFLTGDTAQSIMKGVAFRFSDLRSLFH----YASRSTV 1464
Query: 1436 NDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHSVDILKPETSLIYGEPP 1495
D + R+ I L QN+R+H G+LNLA +++LL +FP S D L ++ L G P
Sbjct: 1465 -DKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPKP 1523
Query: 1496 ILLESGDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIV 1555
+LES + + + GN + + FGA QVILV ++ +++I +G ALVLT+
Sbjct: 1524 TVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEELGL-ALVLTVY 1580
Query: 1556 ESKGLEFQDVLLYKFFSASPLKNQWRVVYEYM-------KEQ-DLLD------STSPGSF 1601
E+KGLEF DVLLY FF+ S +W+++ + KE L++ S+S G
Sbjct: 1581 EAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSDSRKENWPLIEVPLEKSSSSQGRS 1640
Query: 1602 PSFNEVKHNILCSELKQLYVAITRTRQRLWIWENKEEFSKPMFDYWKKRFLVQVRRLDDS 1661
N + +L ELKQLY AITR R LWI++ E P F Y+ +R VQV + D++
Sbjct: 1641 LMMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMRRDFVQVVKTDEN 1700
Query: 1662 --LAQAMQV-ASSPEEWKSRGIKVCEIFKKFIIFVCLWLFYEQNYEMATICFEKAKDTYW 1718
+M V S+PEEW ++G + + K C W + Y+ FEK K
Sbjct: 1701 KDFDDSMFVKTSTPEEWIAQG----DYYAKH---QC-WKVAAKCYQKGG-AFEKEKLAL- 1750
Query: 1719 EGRSKASGLKAAADRISSSNPLEARIILREAAKIFEAIGKVDSAAKCFFDMGEYERAGTI 1778
+ A +K+ ++S P E ++ E A+ + + + KC E++ + +
Sbjct: 1751 -AHNTALNMKSK--KVS---PKEKQMEYLELARTYLECKEPKLSLKCLSYAKEFQLSAQL 1804
Query: 1779 YLERCEEPELEKAGECFSLAGCYK 1802
E+ + + A + + CYK
Sbjct: 1805 -CEKLGK--IRDAAYFYKRSQCYK 1825
Score = 103 (41.3 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 1033 SNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMI-LFPRST---FILG 1088
S V +MKF+S S + ++LSD ++ PF V + + +I L PR ++G
Sbjct: 985 SAVETEYNIMKFHSFSTSMAFNILSDTTTT-VEYPFRVGELEYAVIDLNPRPLEPIILIG 1043
Query: 1089 RSGTGKTTVLIMKLFQK 1105
RSGTGKTT + +L++K
Sbjct: 1044 RSGTGKTTCCLYRLWKK 1060
Score = 67 (28.6 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 23/89 (25%), Positives = 45/89 (50%)
Query: 1140 LRQLFVTVSPKLCFAVKQHISHMKSSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFIDI 1199
L Q+FVT + LC V+++ + ST K + ++ + KL+D+ +
Sbjct: 1161 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLEPN----VHKLQDLRD----- 1208
Query: 1200 PAKSYPLVITFHKFLMMLDGTLCNSYFER 1228
+++PL +T + L++LD +L +F R
Sbjct: 1209 --ENFPLFVTSKQLLLLLDASLPKPFFLR 1235
Score = 48 (22.0 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 1746 LREAAKIFEAIGKVDSAAKCFFDMGEYERAGTIYLERCEEPELEKA 1791
+R+AA ++ A +CF + E++ A +Y C+E E+A
Sbjct: 1811 IRDAAYFYKRSQCYKDAFRCFEQIQEFDLALKMY---CQEELFEEA 1853
Score = 42 (19.8 bits), Expect = 3.7e-56, Sum P(7) = 3.7e-56
Identities = 37/183 (20%), Positives = 75/183 (40%)
Query: 1771 EYERAGTIYLERCEEPELEKAGECFSLAGCYKLAADVYARGSFLAECL-----DVCSKG- 1824
EY YLE C+EP+L +C S A ++L+A + + + + C K
Sbjct: 1771 EYLELARTYLE-CKEPKLSL--KCLSYAKEFQLSAQLCEKLGKIRDAAYFYKRSQCYKDA 1827
Query: 1825 -KLFDIGLQYISYWKQHADTDVGRVKSSKEMKKIEQDFLQSCALHFHKLNDNKSMMKFVR 1883
+ F+ ++ K + ++ +++ ++K E+ L++ L KL+ + S
Sbjct: 1828 FRCFEQIQEFDLALKMYCQEELFE-EAAIAVEKYEE-MLRAKTLPISKLSYSASQ----- 1880
Query: 1884 AFHSMDLIRNFLNSKGCFDXXXXXXXXXXXFMDAANIARLRGDILRTVDLLQKVGNFKEA 1943
F+ ++ +L++ + D + RG + DLL + G +EA
Sbjct: 1881 -FY-LEAAAKYLSANKIKEMMAVLSKLDIE--DQLVFLKSRGRLAEAADLLNREGRREEA 1936
Query: 1944 CNL 1946
L
Sbjct: 1937 ALL 1939
Score = 42 (19.8 bits), Expect = 1.3e-51, Sum P(6) = 1.3e-51
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 167 DTSPT--Y-FKVNATKEIQIDVSKKSLFVIFLINRTSNR-------RIWNSLHM 210
DT+ T Y F+V + ID++ + L I LI R+ R+W H+
Sbjct: 1010 DTTTTVEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKKFHI 1063
Score = 41 (19.5 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 2427 EFIFNIVQQFLYSEKETMEWIKKSCTEIKD 2456
E + +V + S ++ EW+ K+ +K+
Sbjct: 2873 EVMARLVNSLIPSVRDAQEWLMKTELHLKE 2902
Score = 37 (18.1 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 2205 KFLLSSNYSSLQYHAKVLQKFI 2226
K +L NY S + + L+++I
Sbjct: 2261 KDILKPNYKSFRSYRSALKEYI 2282
Score = 37 (18.1 bits), Expect = 9.0e-57, Sum P(7) = 9.0e-57
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 359 NESMKQSEDINGDIIKEKECGKE 381
N++ K E IN + K C K+
Sbjct: 294 NKNFKAIEKINSHLEKLAVCSKD 316
>UNIPROTKB|J9NSW6 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 InterPro:IPR019734 Pfam:PF00580 Pfam:PF13361
PROSITE:PS50293 SMART:SM00028 SMART:SM00248 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 OMA:EQHIHLE
GeneTree:ENSGT00620000088104 EMBL:AAEX03013477
Ensembl:ENSCAFT00000043491 Uniprot:J9NSW6
Length = 2979
Score = 627 (225.8 bits), Expect = 1.0e-56, Sum P(7) = 1.0e-56
Identities = 178/564 (31%), Positives = 286/564 (50%)
Query: 1256 VNYERFSSSYWPHFNAQLARKLDPSRVFTEIISHIKGGLQSIEVVNGKLNREDYVNLSET 1315
V +E F++ WP + +P+ ++ EI S +KG +++ G+L E Y L
Sbjct: 1335 VTFEVFTNEIWPKM-IKGKTSYNPALIWKEIKSFLKGSFEALSCPQGRLTEEAYKKLGRK 1393
Query: 1316 RNSSLSRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLKEESYKGDEFHFVYIDE 1375
R+ + ++ R IY +F Y+Q++ + G FD D++ +L RL H +Y DE
Sbjct: 1394 RSPNF-KEDRSEIYSLFCLYQQIRSQKGYFDEEDVLYNLSRRLSRLKVLPWSIHELYGDE 1452
Query: 1376 VQDLTMSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDIRSLFYKKFVLESRNNG 1435
+QD T +++AL C N +GDTAQ+I +G+ FRF D+RSLF+ SR+
Sbjct: 1453 IQDFTQAELALLMK-CINDPNAMFLTGDTAQSIMKGVAFRFSDLRSLFH----YASRSTV 1507
Query: 1436 NDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHSVDILKPETSLIYGEPP 1495
D + R+ I L QN+R+H G+LNLA +++LL +FP S D L ++ L G P
Sbjct: 1508 -DKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPKP 1566
Query: 1496 ILLESGDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIV 1555
+LES + + + GN + + FGA QVILV ++ +++I +G ALVLT+
Sbjct: 1567 TVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEELGL-ALVLTVY 1623
Query: 1556 ESKGLEFQDVLLYKFFSASPLKNQWRVVYEYM-------KEQ-DLLD------STSPGSF 1601
E+KGLEF DVLLY FF+ S +W+++ + KE L++ S+S G
Sbjct: 1624 EAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSDSRKENWPLIEVPLEKSSSSQGRS 1683
Query: 1602 PSFNEVKHNILCSELKQLYVAITRTRQRLWIWENKEEFSKPMFDYWKKRFLVQVRRLDDS 1661
N + +L ELKQLY AITR R LWI++ E P F Y+ +R VQV + D++
Sbjct: 1684 LMMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMRRDFVQVVKTDEN 1743
Query: 1662 --LAQAMQV-ASSPEEWKSRGIKVCEIFKKFIIFVCLWLFYEQNYEMATICFEKAKDTYW 1718
+M V S+PEEW ++G + + K C W + Y+ FEK K
Sbjct: 1744 KDFDDSMFVKTSTPEEWIAQG----DYYAKH---QC-WKVAAKCYQKGG-AFEKEKLAL- 1793
Query: 1719 EGRSKASGLKAAADRISSSNPLEARIILREAAKIFEAIGKVDSAAKCFFDMGEYERAGTI 1778
+ A +K+ ++S P E ++ E A+ + + + KC E++ + +
Sbjct: 1794 -AHNTALNMKSK--KVS---PKEKQMEYLELARTYLECKEPKLSLKCLSYAKEFQLSAQL 1847
Query: 1779 YLERCEEPELEKAGECFSLAGCYK 1802
E+ + + A + + CYK
Sbjct: 1848 -CEKLGK--IRDAAYFYKRSQCYK 1868
Score = 103 (41.3 bits), Expect = 1.0e-56, Sum P(7) = 1.0e-56
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 1033 SNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMI-LFPRST---FILG 1088
S V +MKF+S S + ++LSD ++ PF V + + +I L PR ++G
Sbjct: 1028 SAVETEYNIMKFHSFSTSMAFNILSDTTTT-VEYPFRVGELEYAVIDLNPRPLEPIILIG 1086
Query: 1089 RSGTGKTTVLIMKLFQK 1105
RSGTGKTT + +L++K
Sbjct: 1087 RSGTGKTTCCLYRLWKK 1103
Score = 67 (28.6 bits), Expect = 1.0e-56, Sum P(7) = 1.0e-56
Identities = 23/89 (25%), Positives = 45/89 (50%)
Query: 1140 LRQLFVTVSPKLCFAVKQHISHMKSSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFIDI 1199
L Q+FVT + LC V+++ + ST K + ++ + KL+D+ +
Sbjct: 1204 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLEPN----VHKLQDLRD----- 1251
Query: 1200 PAKSYPLVITFHKFLMMLDGTLCNSYFER 1228
+++PL +T + L++LD +L +F R
Sbjct: 1252 --ENFPLFVTSKQLLLLLDASLPKPFFLR 1278
Score = 48 (22.0 bits), Expect = 1.0e-56, Sum P(7) = 1.0e-56
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 1746 LREAAKIFEAIGKVDSAAKCFFDMGEYERAGTIYLERCEEPELEKA 1791
+R+AA ++ A +CF + E++ A +Y C+E E+A
Sbjct: 1854 IRDAAYFYKRSQCYKDAFRCFEQIQEFDLALKMY---CQEELFEEA 1896
Score = 42 (19.8 bits), Expect = 4.2e-56, Sum P(7) = 4.2e-56
Identities = 37/183 (20%), Positives = 75/183 (40%)
Query: 1771 EYERAGTIYLERCEEPELEKAGECFSLAGCYKLAADVYARGSFLAECL-----DVCSKG- 1824
EY YLE C+EP+L +C S A ++L+A + + + + C K
Sbjct: 1814 EYLELARTYLE-CKEPKLSL--KCLSYAKEFQLSAQLCEKLGKIRDAAYFYKRSQCYKDA 1870
Query: 1825 -KLFDIGLQYISYWKQHADTDVGRVKSSKEMKKIEQDFLQSCALHFHKLNDNKSMMKFVR 1883
+ F+ ++ K + ++ +++ ++K E+ L++ L KL+ + S
Sbjct: 1871 FRCFEQIQEFDLALKMYCQEELFE-EAAIAVEKYEE-MLRAKTLPISKLSYSASQ----- 1923
Query: 1884 AFHSMDLIRNFLNSKGCFDXXXXXXXXXXXFMDAANIARLRGDILRTVDLLQKVGNFKEA 1943
F+ ++ +L++ + D + RG + DLL + G +EA
Sbjct: 1924 -FY-LEAAAKYLSANKIKEMMAVLSKLDIE--DQLVFLKSRGRLAEAADLLNREGRREEA 1979
Query: 1944 CNL 1946
L
Sbjct: 1980 ALL 1982
Score = 42 (19.8 bits), Expect = 1.4e-51, Sum P(6) = 1.4e-51
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 167 DTSPT--Y-FKVNATKEIQIDVSKKSLFVIFLINRTSNR-------RIWNSLHM 210
DT+ T Y F+V + ID++ + L I LI R+ R+W H+
Sbjct: 1053 DTTTTVEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKKFHI 1106
Score = 41 (19.5 bits), Expect = 1.0e-56, Sum P(7) = 1.0e-56
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 2427 EFIFNIVQQFLYSEKETMEWIKKSCTEIKD 2456
E + +V + S ++ EW+ K+ +K+
Sbjct: 2916 EVMARLVNSLIPSVRDAQEWLMKTELHLKE 2945
Score = 37 (18.1 bits), Expect = 1.0e-56, Sum P(7) = 1.0e-56
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 2205 KFLLSSNYSSLQYHAKVLQKFI 2226
K +L NY S + + L+++I
Sbjct: 2304 KDILKPNYKSFRSYRSALKEYI 2325
Score = 37 (18.1 bits), Expect = 1.0e-56, Sum P(7) = 1.0e-56
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 359 NESMKQSEDINGDIIKEKECGKE 381
N++ K E IN + K C K+
Sbjct: 337 NKNFKAIEKINSHLEKLAVCSKD 359
>UNIPROTKB|I3L717 [details] [associations]
symbol:LOC100514320 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000212 InterPro:IPR014016
Pfam:PF00580 GO:GO:0005524 GO:GO:0003677 GO:GO:0004003
PANTHER:PTHR11070 GeneTree:ENSGT00620000088104 EMBL:CU856332
Ensembl:ENSSSCT00000031166 OMA:STHEECA Uniprot:I3L717
Length = 827
Score = 504 (182.5 bits), Expect = 1.0e-51, Sum P(3) = 1.0e-51
Identities = 117/319 (36%), Positives = 181/319 (56%)
Query: 1256 VNYERFSSSYWPHFNAQLARKLDPSRVFTEIISHIKGGLQSIEVVNGKLNREDYVNLSET 1315
V +E F+S WP + +P+ ++ EI S +KG +++ G+L E Y L
Sbjct: 492 VTFEEFTSEIWPKM-IKGKTSYNPALIWKEIKSFLKGSFEALSSPQGRLTEEAYKQLGRK 550
Query: 1316 RNSSLSRQKRERIYDIFESYEQMKMRNGEFDLADLVNDLHHRLKEESYKGDEFHFVYIDE 1375
R+ + ++ R IY +F Y+Q++ + G FD D++ +L RL + H +Y DE
Sbjct: 551 RSPNF-KEDRSEIYGLFCLYQQIRSQKGYFDEEDVLYNLSRRLSKLKVLPWSIHELYGDE 609
Query: 1376 VQDLTMSQVALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDIRSLFYKKFVLESRNNG 1435
+QD T +++AL C N +GDTAQ+I +G+ FRF D+RSLF+ S+N G
Sbjct: 610 IQDFTQAELALLMK-CINDPNAMFLTGDTAQSIMKGVAFRFSDLRSLFH----YASKNTG 664
Query: 1436 NDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHSVDILKPETSLIYGEPP 1495
D + R+ I L QN+R+H G+L+LA +++LL +FP S D L ++ L G P
Sbjct: 665 -DKQCAVRKPKKIHQLYQNYRSHSGILSLASGVVDLLQYYFPESFDRLPRDSGLFDGPRP 723
Query: 1496 ILLESGDEENAILKIFGNTGEVGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIV 1555
I+LES + + + GN + + FGA QVILV ++ +++I +G ALVLT+
Sbjct: 724 IVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEELGL-ALVLTVY 780
Query: 1556 ESKGLEFQDVLLYKFFSAS 1574
E+KGLEF DVLLY FF+ S
Sbjct: 781 EAKGLEFDDVLLYNFFTDS 799
Score = 102 (41.0 bits), Expect = 1.0e-51, Sum P(3) = 1.0e-51
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 1033 SNVSDSLLLMKFYSLSLGVVRHLLSDRDARELDLPFEVTDEQLDMI-LFPRST---FILG 1088
S V +MKF+S S + ++L+D ++ PF V + + +I L PR ++G
Sbjct: 187 SAVETEYNIMKFHSFSTSMASNILNDTTTT-VEYPFRVGELEYAVIDLNPRPLEPIILIG 245
Query: 1089 RSGTGKTTVLIMKLFQK 1105
RSGTGKTT + +L++K
Sbjct: 246 RSGTGKTTCCLYRLWKK 262
Score = 69 (29.3 bits), Expect = 1.0e-51, Sum P(3) = 1.0e-51
Identities = 29/125 (23%), Positives = 57/125 (45%)
Query: 1105 KEKLHNMALEGFFGVNNS-SQETEAEKDLEKTERVILRQLFVTVSPKLCFAVKQHISHMK 1163
+E+ EG G + SQ E + + L Q+FVT + LC V+++ + +
Sbjct: 325 EEQESEACAEGANGEPEAPSQGAEGPAPEQPHQLEHLHQIFVTKNHVLCQEVQRNFTELS 384
Query: 1164 SSTIGGKFATEGSLIDTDDIDDAEKLKDIPNSFIDIPAKSYPLVITFHKFLMMLDGTLCN 1223
ST K + ++ +L+D+ + +++PL +T + L++LD +L
Sbjct: 385 KST---KATSHYKSLEPS----VHRLQDLKD-------ENFPLFVTSKQLLLLLDASLPE 430
Query: 1224 SYFER 1228
+F R
Sbjct: 431 PFFLR 435
Score = 46 (21.3 bits), Expect = 7.2e-46, Sum P(3) = 7.2e-46
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 164 NEIDTSPTY-FKVNATKEIQIDVSKKSLFVIFLINRTSNR-------RIWNSLHM 210
N+ T+ Y F+V + ID++ + L I LI R+ R+W H+
Sbjct: 211 NDTTTTVEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKKFHV 265
Score = 39 (18.8 bits), Expect = 7.0e-43, Sum P(2) = 7.0e-43
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 154 VSVANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHMKG 212
+S+ N EDE E + Y + E + S ++V F TS IW + +KG
Sbjct: 454 LSIPNWQEDEEEAEADGDYGEEEKVVETRPCDSDPRVYVTFE-EFTSE--IWPKM-IKG 508
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 468 (169.8 bits), Expect = 3.4e-44, Sum P(4) = 3.4e-44
Identities = 110/299 (36%), Positives = 161/299 (53%)
Query: 558 ASLFFSTASSS-YMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL 616
A + F+T SSS L S + +VIDEAAQ E PL L G VL GD QL
Sbjct: 753 AEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCVLVGDPQQL 811
Query: 617 PAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPT 676
PA V SK + + RSLFE +QYRMHP I FP+ YFY+ ++ DS +
Sbjct: 812 PATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLKDSES 871
Query: 677 VEKRSYEKRFLPGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILLNLYKGWIN 734
+ ++ + P+ PY F N+ GRE S N+ E + + ++L K +
Sbjct: 872 ISSAP-DEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVYMHLQKTLKS 930
Query: 735 -SKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRS 793
K+S+G+++PY Q+ ++ + G+ + + +VD FQG E D+II+S VR+
Sbjct: 931 LGAGKVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERDVIIMSCVRA 990
Query: 794 NNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNAD 852
+ G +GF+S+ RR+NVALTRAR LW++GN L ++ W AL+ DA+ R CF D
Sbjct: 991 SGHG-VGFVSDIRRMNVALTRARRALWVMGNASALMKSED-WAALISDARGRNCFMEMD 1047
Score = 81 (33.6 bits), Expect = 3.4e-44, Sum P(4) = 3.4e-44
Identities = 37/146 (25%), Positives = 64/146 (43%)
Query: 9 NSRSKKKRAVPYDYGFTDTVFSWSLEDIFNEDLFKD----KVKRIPFSFRSVGQYFESFV 64
+ RS KK A + DT + ++ NE ++ +++ +P F S+ +Y F
Sbjct: 214 SQRSFKKPATSSTQ-YQDTSVERLIREVTNEKFWRHPEDTELRSVPERFESMEEYVRVFE 272
Query: 65 FPLLEETRANLMSGMEKISNAPFAQVVAFEDSKPYGSMLYDVKVDCWRNRFSNLGREPYK 124
L EE RA L S +++ A V + + YDV + N + + +K
Sbjct: 273 PLLFEECRAQLYSTWVELAEANTYVKVRIKSIERRERGWYDVIL----NSLNGC-KWAFK 327
Query: 125 TLPGDILVLADAKPETASDLQRVGRM 150
GD+ VL+ PE+ D + GR+
Sbjct: 328 E--GDVAVLSTPLPESDEDHEDAGRV 351
Score = 66 (28.3 bits), Expect = 3.4e-44, Sum P(4) = 3.4e-44
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 231 LIWGPPGTGKTKTV-SMLLVILL 252
L+ GPPGTGKT TV ML VI L
Sbjct: 499 LVQGPPGTGKTHTVWGMLNVIHL 521
Score = 51 (23.0 bits), Expect = 3.4e-44, Sum P(4) = 3.4e-44
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 255 KFRTLVCTPTIVAIKELASRVV 276
K R LVC P+ A EL SRV+
Sbjct: 578 KPRMLVCAPSNAATDELLSRVL 599
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 449 (163.1 bits), Expect = 7.7e-43, Sum P(3) = 7.7e-43
Identities = 111/304 (36%), Positives = 163/304 (53%)
Query: 558 ASLFFSTASSS-YMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL 616
A + F+T SSS L S + +VIDEAAQ E PL L G VL GD QL
Sbjct: 916 AEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCVLVGDPQQL 974
Query: 617 PAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPT 676
PA V SK + + RSLFE +QYRMHP I FP+ YFY+ ++ DS +
Sbjct: 975 PATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLTDSES 1034
Query: 677 VEKRSYEKRFLPGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILLNLYKGWIN 734
V ++ + + PY F ++ GRE S N+ E + + L+L + +
Sbjct: 1035 VSTAP-DEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCVGVYLHLQRTLKS 1093
Query: 735 -SKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRS 793
K+S+G+++PY Q+ ++ + G+ + + +VD FQG E D+II+S VR+
Sbjct: 1094 LGGGKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQERDVIIMSCVRA 1153
Query: 794 NNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADD 853
+N G +GF+++ RR+NVALTRA+ LW++GN L + W AL+ DAKAR CF +
Sbjct: 1154 SNHG-VGFVADIRRMNVALTRAKRALWVMGNASALMKCED-WAALITDAKARNCFMEMES 1211
Query: 854 -DKD 856
KD
Sbjct: 1212 LPKD 1215
Score = 89 (36.4 bits), Expect = 7.7e-43, Sum P(3) = 7.7e-43
Identities = 41/145 (28%), Positives = 70/145 (48%)
Query: 12 SKKKRAVPYDYGFTDTVFSWSLEDIFNEDLF---KDK-VKRIPFSFRSVGQYFESFVFPL 67
S KK+A + DT L ++ NE + +D ++ +P F S+ +Y F L
Sbjct: 381 SFKKQATNSTQ-YQDTSVERLLREVTNEKFWHHPEDTDLQSVPERFESMDEYVRVFEPLL 439
Query: 68 LEETRANLMSGMEKISNA-PFAQV-VAFEDSKPYGSMLYDVKVDCWRNRFSNLGREPYKT 125
EE RA L S E+++ A + +V + F + + G YDV ++ N + +K
Sbjct: 440 FEECRAQLYSTWEELAEANSYMKVRIKFIERRERG--WYDVILNS-----VNECKWAFKE 492
Query: 126 LPGDILVLADAKPETASDLQRVGRM 150
GD+ VL++ PE+ + VGR+
Sbjct: 493 --GDVAVLSNPVPESEGEHDDVGRV 515
Score = 72 (30.4 bits), Expect = 7.7e-43, Sum P(3) = 7.7e-43
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKES 282
L+ GPPGTGKT TV +L ++ ++++ + +K+LA K V ES
Sbjct: 663 LVQGPPGTGKTHTVWGMLNVIHLVQYQQYYTS----LLKKLAPESYKQVNES 710
Score = 51 (23.0 bits), Expect = 1.2e-40, Sum P(3) = 1.2e-40
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 255 KFRTLVCTPTIVAIKELASRVV 276
K R LVC P+ A EL SRV+
Sbjct: 741 KPRMLVCAPSNAATDELLSRVL 762
Score = 43 (20.2 bits), Expect = 4.0e-36, Sum P(2) = 4.0e-36
Identities = 25/76 (32%), Positives = 32/76 (42%)
Query: 305 ERLKVDSG-VEEIYLDYRVKRLADCFAPLTGWSHCFASMVEFLDNC--VSQYHTYMENES 361
ER KVD G +EE + +K D AP S V DN S Y T E ++
Sbjct: 88 ER-KVDEGSLEEAKVT-SLKVPNDVGAPEREEGEWTESEVPANDNVHSSSDYSTVTEKDN 145
Query: 362 MKQSEDINGDIIKEKE 377
DIN D +K+
Sbjct: 146 GTLGLDINSDSALQKK 161
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 390 (142.3 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 103/288 (35%), Positives = 151/288 (52%)
Query: 555 LKRASLFFST-ASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 613
+K AS+ FST A S P + ++IDE+ Q E S IPL L +K +L GD
Sbjct: 1304 IKSASIVFSTLAGSGSKAIFENFSP-DIVLIDESTQSSEPTSIIPLSLGSVKKLILVGDP 1362
Query: 614 CQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHD 673
QLP + SK + SLFE QYRMHP S F + FY + D
Sbjct: 1363 VQLPPTIFSKQGADCGLKISLFERLAKSIDVQFLNT-QYRMHPVTSKFISEEFYNGTLKD 1421
Query: 674 SPTVEKRSYEK-RFLPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGW 732
V SY +F P +GP F ++ ++ I+ S N E+ V ++ L + +
Sbjct: 1422 GENVSIDSYNNCKFHFDPSFGPMKFFDLPKSNQKVIKKSIMNQDEIDKVFTLIKELIEKY 1481
Query: 733 INSKEKLSIGIVSPYIAQVAAIQEKLG-SKYVNSAGFAVKVMSVDGFQGGEEDIIIISTV 791
K KLS GI++PY Q+ I+E+L S++ N + V ++DG QG E+DIII+S V
Sbjct: 1482 PECK-KLSFGIITPYKLQMNQIKEQLNRSEHHN---LNISVSTIDGVQGSEKDIIIMSCV 1537
Query: 792 RSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALV 839
RS IGF+S+ RR+NVALTRA+ L+++G + L ++ + K L+
Sbjct: 1538 RSIEKFGIGFLSDRRRINVALTRAKLGLYVIGTYKVLAKDNTWEKFLI 1585
Score = 132 (51.5 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 211 KGNLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTPTIVAI 268
+ L IK L +SG T LI GPPGTGKT T++ LL +LL + KF+ LVC P+ ++
Sbjct: 1195 ESQLNAIKSSL-VESGIT--LIQGPPGTGKTTTINYLLSVLLAIDKKFKILVCGPSHASV 1251
Query: 269 KELASRVVK 277
E+A R +K
Sbjct: 1252 DEVAKRCLK 1260
Score = 40 (19.1 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 9/44 (20%), Positives = 23/44 (52%)
Query: 282 SVERDCRDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRVKRL 325
++ +++ F + E + + N+ RLK + E++ D + +L
Sbjct: 633 NIASSIQNSFFRIIVEFIHMENSIRLKKFKDINELFKDISLPKL 676
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 426 (155.0 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 104/308 (33%), Positives = 164/308 (53%)
Query: 548 DLLKRFCLKRASLFFSTAS-SSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKH 606
D ++ L+ A++ F+T S S L + + + + ++IDEAAQ E + IPL + K
Sbjct: 452 DSIRTAILEEAAIVFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATLIPLA-TRCKQ 510
Query: 607 AVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYF 666
L GD QLPA V S V+ ++ +G S+FE QYRMHP I FP+ F
Sbjct: 511 VFLVGDPKQLPATVISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHPEIRSFPSKQF 570
Query: 667 YENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIEH-----SCRNMVEVSVV 721
YE + D +E ++ + + +GP+ F ++ G+E +H S N+ EV V
Sbjct: 571 YEGALEDGSDIEAQT-TRDWHKYRCFGPFCFFDIHEGKES--QHPGATGSRVNLDEVEFV 627
Query: 722 MKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGG 781
+ I L + K + I+SPY QV +++ + A V + +VDGFQG
Sbjct: 628 LLIYHRLVTMYPELKSSSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVVDINTVDGFQGR 687
Query: 782 EEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDD 841
E+D+ I S VR+N G IGF+SN RR+NV +TRA+ + ++G+ TL ++ +WK L++
Sbjct: 688 EKDVAIFSCVRANENGQIGFLSNSRRMNVGITRAKSSVLVVGSAATL-KSDPLWKNLIES 746
Query: 842 AKARQCFF 849
A+ R F
Sbjct: 747 AEQRNRLF 754
Score = 65 (27.9 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 231 LIWGPPGTGKTKTVSMLL 248
LI GPPGTGKT+T+ +L
Sbjct: 277 LIQGPPGTGKTQTILSIL 294
Score = 59 (25.8 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 43 KDKVKRIPFSFRSVGQYFESFVFPLLEETRANLMSGME 80
K+K+ + +++ V YFE+F L EE +A ++ +
Sbjct: 44 KEKLNVVKNTYKDVDDYFETFEPLLFEEVKAQILQNKD 81
Score = 52 (23.4 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 255 KFRTLVCTPTIVAIKELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVE 314
+ R LVC P+ A+ E+ V++L+ + RD + P +I+ +G LK V
Sbjct: 374 RLRVLVCAPSNSALDEI---VLRLLSSGL-RDENAQTYTP--KIVRIG----LKAHHSVA 423
Query: 315 EIYLDYRV 322
+ LD+ V
Sbjct: 424 SVSLDHLV 431
Score = 40 (19.1 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 23 GFTDTVFSWS--LEDIFNEDLFKDKVKRIPFSFRSVGQYFESFV 64
GF D + S L + FNE+L K + + I VG +SFV
Sbjct: 238 GFGDEAWKISGPLNEFFNENLNKSQKEAI-----DVGLSRKSFV 276
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 423 (154.0 bits), Expect = 4.2e-38, Sum P(3) = 4.2e-38
Identities = 114/314 (36%), Positives = 176/314 (56%)
Query: 551 KRFCLKRASLFFST--ASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSG--IKH 606
K+ L+ +S+ FST AS S ++ S + KP N +++DEA Q E+ IPL L +K
Sbjct: 3665 KKMILEHSSICFSTLSASGSNLVQS-SFKP-NVVIVDEATQSCETSCIIPLSLGAKSMKK 3722
Query: 607 AVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYF 666
+L GD QLP + SK S G SLFE +QYRMHP IS FP+S F
Sbjct: 3723 LILVGDPVQLPPTIFSKESIHCGLGISLFERLSKVLPVSMLN-VQYRMHPLISKFPSSQF 3781
Query: 667 YENKIHDSPTV-EKRSYEKRFLPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKIL 725
Y + + D V +Y RF YG F +V REE + S +N +E+++V ++
Sbjct: 3782 YHDILKDGDNVVSSDAYSLRFHENQDYGAIRFFDVTDSREERGKTSIKNQLEITMVFTLI 3841
Query: 726 LNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDI 785
L + +K+ S GIV+PY Q I++ K +N + +++ ++D FQG E+DI
Sbjct: 3842 KKLTQDHPETKQ-YSFGIVTPYKLQRKEIEDAY--KQLNLS-LNIEIKTIDSFQGSEKDI 3897
Query: 786 IIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKA- 844
+I+S VR+ SIGF+S+ RR+NV++TRA++ L+I+GN L +R+ W L+D +
Sbjct: 3898 MIMSCVRNE---SIGFLSDRRRINVSITRAKYGLFIIGNATLLKLDRT-WGELIDHLISI 3953
Query: 845 -RQCFFNADDDKDL 857
R N++D ++L
Sbjct: 3954 DRVYSINSNDIENL 3967
Score = 124 (48.7 bits), Expect = 4.2e-38, Sum P(3) = 4.2e-38
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 205 WNSLHMKGNLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMK--FRTLVCT 262
+N + L I E L S + LI GPPGTGKT T++ L+ I+L + F+ LVC
Sbjct: 3552 YNQTLNESQLAAINESLVHSS---ITLIQGPPGTGKTHTITSLISIILAINPDFKILVCG 3608
Query: 263 PTIVAIKELASRVV 276
P+ A+ E+A RV+
Sbjct: 3609 PSHAAVDEVAKRVI 3622
Score = 50 (22.7 bits), Expect = 1.2e-28, Sum P(4) = 1.2e-28
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 342 MVEFLDNCVSQYHTYMENESMKQSED-INGDIIKEKECGKEADASDVEIKPFLEFVRERF 400
M++ +D+C+ Y Y+ S+K +D IN ++ +E + + L V F
Sbjct: 2019 MIDSIDSCIGLYPNYLP--SLKYLKDFINNYPMEFREYSMKLVVQRERTRMDLRKVLGDF 2076
Query: 401 KCIINGDIIKE 411
+N I KE
Sbjct: 2077 SNSLNPQIYKE 2087
Score = 42 (19.8 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 26/84 (30%), Positives = 36/84 (42%)
Query: 340 ASMVEF-LDNCVSQYHTYME--NESMKQS-EDINGDIIKEKECGKEADASDVEIKPFLEF 395
AS ++F L N + +E NE K+ D G K K+ + S EIK F
Sbjct: 81 ASQLDFQLYNKFIRLRVMIEFSNEYQKKCLGDFFGMDAKSKD---QLLKSMNEIKVFQNS 137
Query: 396 VRERFKCIINGDIIKEKEC--GKE 417
F +IN D K+C GK+
Sbjct: 138 APLNFPDMINNDYSDNKKCSVGKD 161
Score = 39 (18.8 bits), Expect = 4.2e-38, Sum P(3) = 4.2e-38
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 29 FSWSLEDIFNEDLFKDKVKRIPFSFRSVGQ 58
F + L+D N+D+ + + F+F+ GQ
Sbjct: 798 FPYLLKDFINKDISTRPI--VNFTFQFEGQ 825
Score = 39 (18.8 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 10/45 (22%), Positives = 23/45 (51%)
Query: 507 IVDIKYLLHKRRSECHFVLRKLLSSFNELNLPSAVEKDLLEDLLK 551
+V IK ++ C + +K+LS + ++ LL+++L+
Sbjct: 2597 LVSIKSMIKTNDDLCEDIYQKILSFKILIETSHCYQRLLLKEILE 2641
Score = 39 (18.8 bits), Expect = 1.6e-27, Sum P(4) = 1.6e-27
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 358 ENESMKQSEDINGDIIKEKECGKEADASDVEIKPFLEFVRERFKCIINGDIIKEKECGKE 417
EN++ ED + D E++ E+ +D++ K + F I++ I + + G E
Sbjct: 1169 ENDNDDDDEDEDEDEENEEDEEDESYENDIDNKNNNKNNNNDF--IVSNKIQNQSQIGDE 1226
Query: 418 ADASDVEIKPFL--EFVRERFKC 438
+ + + + E E + C
Sbjct: 1227 YGINHINVNLNVQNEIDNENYHC 1249
Score = 38 (18.4 bits), Expect = 2.0e-27, Sum P(4) = 2.0e-27
Identities = 21/79 (26%), Positives = 33/79 (41%)
Query: 206 NSLHMKGNLKIIKELL--CTDSG---ATVQLIWG--PPGTGKTKTVSMLLVILLQMKFRT 258
NSLH + I+KE TD A + L+ P + + VS +L+ Q F
Sbjct: 2275 NSLHSSNSCGILKEAFRDTTDISTIVAAINLLITRFPEHENRLQLVSSILIGGTQDSFSQ 2334
Query: 259 LVCTPTIVAIKELASRVVK 277
V T ++L +V+
Sbjct: 2335 KVQTNRAKTHRDLQRIIVE 2353
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 415 (151.1 bits), Expect = 9.8e-38, Sum P(3) = 9.8e-38
Identities = 107/281 (38%), Positives = 158/281 (56%)
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKVSDEACFGRSLFEXXXX 640
++IDE+ Q E E IP+ + G K +L GD QL P +++ K +D A +SLFE
Sbjct: 602 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAAD-AGLKQSLFERLVF 659
Query: 641 XXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYG-PYSFIN 699
+QYRMHP +S FP++ FYE + + T + R E+ P P+ P F
Sbjct: 660 LGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWA 719
Query: 700 VFGGREEFIE--HSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQE- 756
+G REE +S N VE V KI+ L+K I ++ IG+++PY Q A + +
Sbjct: 720 NYG-REELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQF 775
Query: 757 -KLGSKYVNSAG--FAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALT 813
+ S ++ V++ SVD FQG E+D II+S VR+N+ SIGF+S+PRR+NVALT
Sbjct: 776 MSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALT 835
Query: 814 RARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADDD 854
RA++ L ILGN R+L RNR +W L+ + + C + D
Sbjct: 836 RAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDGPLD 875
Score = 98 (39.6 bits), Expect = 9.8e-38, Sum P(3) = 9.8e-38
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPTIVAIKELASRV 275
+ LI GPPGTGKT T + ++ L ++ K + LVC P+ VA+ LA+++
Sbjct: 457 LSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKL 504
Score = 43 (20.2 bits), Expect = 9.8e-38, Sum P(3) = 9.8e-38
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 1405 AQTIARGIDFRFQDIRSLFYKKFVLESRNNGNDGRQE-KRQLSDIFNLRQ 1453
A TI DF I S V +S +NGN+ K ++ N RQ
Sbjct: 917 ASTINSVTDFDSASILSYDNSAIVHKSGHNGNNNNNNIKEEMWPALNGRQ 966
Score = 42 (19.8 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 1218 DGTLCNSYFERFHNIWKNYG 1237
D +L +++ + + I KNYG
Sbjct: 972 DNSLSANFYNKLNKIDKNYG 991
Score = 38 (18.4 bits), Expect = 3.2e-37, Sum P(3) = 3.2e-37
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 1334 SYEQMKMRNGEFDLADLVNDL 1354
+Y + R G+F +A +N +
Sbjct: 903 NYSNGRQRRGKFGVASTINSV 923
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 415 (151.1 bits), Expect = 9.8e-38, Sum P(3) = 9.8e-38
Identities = 107/281 (38%), Positives = 158/281 (56%)
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKVSDEACFGRSLFEXXXX 640
++IDE+ Q E E IP+ + G K +L GD QL P +++ K +D A +SLFE
Sbjct: 602 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAAD-AGLKQSLFERLVF 659
Query: 641 XXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYG-PYSFIN 699
+QYRMHP +S FP++ FYE + + T + R E+ P P+ P F
Sbjct: 660 LGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWA 719
Query: 700 VFGGREEFIE--HSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQE- 756
+G REE +S N VE V KI+ L+K I ++ IG+++PY Q A + +
Sbjct: 720 NYG-REELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQF 775
Query: 757 -KLGSKYVNSAG--FAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALT 813
+ S ++ V++ SVD FQG E+D II+S VR+N+ SIGF+S+PRR+NVALT
Sbjct: 776 MSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALT 835
Query: 814 RARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADDD 854
RA++ L ILGN R+L RNR +W L+ + + C + D
Sbjct: 836 RAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDGPLD 875
Score = 98 (39.6 bits), Expect = 9.8e-38, Sum P(3) = 9.8e-38
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPTIVAIKELASRV 275
+ LI GPPGTGKT T + ++ L ++ K + LVC P+ VA+ LA+++
Sbjct: 457 LSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKL 504
Score = 43 (20.2 bits), Expect = 9.8e-38, Sum P(3) = 9.8e-38
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 1405 AQTIARGIDFRFQDIRSLFYKKFVLESRNNGNDGRQE-KRQLSDIFNLRQ 1453
A TI DF I S V +S +NGN+ K ++ N RQ
Sbjct: 917 ASTINSVTDFDSASILSYDNSAIVHKSGHNGNNNNNNIKEEMWPALNGRQ 966
Score = 42 (19.8 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 1218 DGTLCNSYFERFHNIWKNYG 1237
D +L +++ + + I KNYG
Sbjct: 972 DNSLSANFYNKLNKIDKNYG 991
Score = 38 (18.4 bits), Expect = 3.2e-37, Sum P(3) = 3.2e-37
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 1334 SYEQMKMRNGEFDLADLVNDL 1354
+Y + R G+F +A +N +
Sbjct: 903 NYSNGRQRRGKFGVASTINSV 923
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 408 (148.7 bits), Expect = 2.6e-37, Sum P(4) = 2.6e-37
Identities = 99/286 (34%), Positives = 160/286 (55%)
Query: 551 KRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLF 610
++ ++ A++ F+T S+S + N +++DE+ Q E S IPL + I+ +L
Sbjct: 1702 RKAIIRNATIIFATLSASGSKPIRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILV 1761
Query: 611 GDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENK 670
GD QLP + S S + SLFE QYRMHP+IS FP++ FY+++
Sbjct: 1762 GDPLQLPPTIFSSESAKNGLNISLFERLSKVLPVEMLNT-QYRMHPTISRFPSNQFYKDR 1820
Query: 671 IHDSPTVEKRSYEKR-FLPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLY 729
+ D V+ Y + F YGP F +V +EE + S +N +E+++V ++ L
Sbjct: 1821 LLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLV 1880
Query: 730 KGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIIS 789
+ + K K S GI++PY Q + I+E+ K N ++ ++DG QG E+DIII+S
Sbjct: 1881 QDYPECK-KFSFGIITPYKLQKSEIKEQ--HKQFNYP-LNIETSTIDGVQGSEKDIIILS 1936
Query: 790 TVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVW 835
VRS IGF+S+ RR+NVALTRA+ L+++GN + L ++R+ W
Sbjct: 1937 CVRSER---IGFLSDRRRINVALTRAKFGLFVIGNSKLLKKDRT-W 1978
Score = 132 (51.5 bits), Expect = 2.6e-37, Sum P(4) = 2.6e-37
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 153 FVSVANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHMKG 212
F+ V+N T E++ +P FK + T QI ++ + R + S+ ++
Sbjct: 1535 FIKVSNSTTFIRELE-APEIFKNSKTLLNQILQPSLEVYNLMTSMRMEIPSLLRSMCIQE 1593
Query: 213 -NLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTPTIVAIK 269
N + + S + LI GPPGTGKT T+ LL ILL + KF+ LVC P+ ++
Sbjct: 1594 LNTSQFSAVETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGPSHASVD 1653
Query: 270 ELASRVVK 277
E+A R +K
Sbjct: 1654 EVAKRCLK 1661
Score = 43 (20.2 bits), Expect = 2.6e-37, Sum P(4) = 2.6e-37
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 38 NEDLFKDKVKRIPFSFRSVGQYFESFVFPLLEETRAN 74
N +L K+ ++ FS G++F++ V T+ N
Sbjct: 1238 NSELAKNNKMKLEFSDIVKGKFFDNLVSNFESTTKIN 1274
Score = 43 (20.2 bits), Expect = 3.8e-27, Sum P(5) = 3.8e-27
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 521 CHFVL----RKLLSSFNELNLPSAVEKDLL 546
C FVL + L+ F ++L S KD+L
Sbjct: 1504 CEFVLSDSTKPLIEKFYSVSLNSKTSKDIL 1533
Score = 41 (19.5 bits), Expect = 2.6e-37, Sum P(4) = 2.6e-37
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 2245 SLNENMISLKGTKLYRN-IIK----EVFSKHIGLKGKLSYGQI 2282
S N N+I LK + N ++K F+K + KL+ Q+
Sbjct: 2373 STNRNLIKLKSQTIVENYLVKYYDWSSFNKFEPKRNKLTIAQL 2415
Score = 41 (19.5 bits), Expect = 2.6e-37, Sum P(4) = 2.6e-37
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 1134 KTERVILRQLFVTVSPKLC-FAVKQHISHMKSSTIGGKFATEGSLIDTDDI 1183
K ++ + QLF F K++I + S+ GG G+L+ +I
Sbjct: 2406 KRNKLTIAQLFYQFFYYYSTFNYKENIISISHSSGGGSLCENGALLKRSNI 2456
Score = 40 (19.1 bits), Expect = 3.3e-37, Sum P(4) = 3.3e-37
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 2290 LRTGKLGKDVYG--RVAKRFDGYTPWKEFVESLSINMGLESYRGSVLQ 2335
L K G V G ++ K+ + P+ ++V S++ + ++S SVL+
Sbjct: 1956 LTRAKFGLFVIGNSKLLKKDRTWGPFCQYVHSINSMVSIDSKGISVLE 2003
Score = 40 (19.1 bits), Expect = 3.8e-27, Sum P(5) = 3.8e-27
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 262 TPTIVAIKELASRVVKLVKESVE-RDCRDALFFPLGEILL 300
TPTI + +EL+ +V +K +++ +D + ++ L +ILL
Sbjct: 1436 TPTIHSFRELSEDLVA-IKFNIKVKDELEEIY--LNDILL 1472
Score = 38 (18.4 bits), Expect = 5.3e-37, Sum P(4) = 5.3e-37
Identities = 17/74 (22%), Positives = 32/74 (43%)
Query: 1190 KDIPNSFIDIPAKSYPLVITFHKFLMMLDGTLCNSYFERFHNIWKNYGQLQNSKSVFIET 1249
KD+ N+ + S+ LV FL L+ + + + + + Y +N + +T
Sbjct: 2327 KDLNNA-AEKTFSSFCLVNMVIHFLQSLNPPILPNLQTTSNQLLEKYSTNRNLIKLKSQT 2385
Query: 1250 IIRKKEVNYERFSS 1263
I+ V Y +SS
Sbjct: 2386 IVENYLVKYYDWSS 2399
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 388 (141.6 bits), Expect = 3.1e-37, Sum P(2) = 3.1e-37
Identities = 118/341 (34%), Positives = 172/341 (50%)
Query: 514 LHK--RRSECHFVLRKLLSSFNELN-LPSAVEKDL--LEDLLKRFCLKRASLFFSTASSS 568
LH+ R ++ + L KL +EL L S EK L L +R L A + T +
Sbjct: 514 LHEQVRLNDSNIELIKLNQLKSELGELSSQDEKRLKQLTRAAEREILNNADVICCTCVGA 573
Query: 569 YMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEA 628
+K ++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A
Sbjct: 574 GDPRLAKLK-FRTVLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKA 631
Query: 629 CFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLP 688
+SLFE +QYRMHP +S FP++ FYE + + T R + P
Sbjct: 632 GLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFP 691
Query: 689 GPMY-GPYSFINVFGGREEFIEH-SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSP 746
P+ P F + G E S N E + V KI+ +K + K+ IGI++P
Sbjct: 692 WPILDSPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKD---IGIITP 748
Query: 747 YIAQVAAIQEKLGSK--YVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISN 804
Y Q + I + + + ++V SVD FQG E+D II+S VRSN+ IGF+S+
Sbjct: 749 YEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSD 808
Query: 805 PRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKAR 845
PRR+NVALTRA++ L ILGN + L+++ +W L+ K R
Sbjct: 809 PRRLNVALTRAKYGLVILGNPKVLSKH-PLWNCLLQHFKER 848
Score = 113 (44.8 bits), Expect = 3.1e-37, Sum P(2) = 3.1e-37
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPTIVAIKELASRVVK--LVKESVER 285
+ LI GPPGTGKT T + ++ L ++ + LVC P+ VA+ +L R+ + L V
Sbjct: 440 LSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTA 499
Query: 286 DCRDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRVKRLAD 327
R+ + P+G L L RL DS +E I L+ L +
Sbjct: 500 KSREDVESPVG-FLSLHEQVRLN-DSNIELIKLNQLKSELGE 539
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 417 (151.9 bits), Expect = 3.2e-37, Sum P(4) = 3.2e-37
Identities = 107/284 (37%), Positives = 160/284 (56%)
Query: 557 RASLFFSTASSSYMLHSVAMKPLNF----LVIDEAAQLKESESTIPLQLSGIKHAVLFGD 612
RAS+ FST S S S +K NF +++DE+ Q E S IPL + I+ +L GD
Sbjct: 1357 RASIVFSTLSGS---GSETVKN-NFRADIILVDESTQSTEPSSIIPLCIGNIEKLILVGD 1412
Query: 613 ECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIH 672
QLP + S S E SLFE +QYRMHP+IS FP++ FY +++
Sbjct: 1413 PLQLPPTIFSTESAENGLNISLFERLSKVLPVEMLH-VQYRMHPTISRFPSNQFYRDRLL 1471
Query: 673 DSPTVEKRSYEKR-FLPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKG 731
D V+ Y + F YGP F +V +EE + S +N +E+++V ++ L +
Sbjct: 1472 DGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQD 1531
Query: 732 WINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTV 791
+ K K S GI++PY Q + I+E+ K N ++ ++DGFQG E+DIII+S V
Sbjct: 1532 YPECK-KFSFGIITPYKLQKSEIKEQ--HKQFNYP-LNIETSTIDGFQGSEKDIIILSCV 1587
Query: 792 RSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVW 835
RS IGF+S+ RR+NVALTRA+ L+++GN + L ++R+ W
Sbjct: 1588 RSER---IGFLSDRRRINVALTRAKFGLFVIGNSKLLKKDRT-W 1627
Score = 118 (46.6 bits), Expect = 3.2e-37, Sum P(4) = 3.2e-37
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTPTIVAIKELASRVVKLVKESVERD 286
+ LI GPPGTGKT T+ LL ILL + +F+ LVC P+ ++ E+A R K K+ + D
Sbjct: 1260 ITLIQGPPGTGKTTTIYYLLSILLAINPEFKILVCGPSHASVDEIAKRCSK--KKLIGLD 1317
Query: 287 CRDALFFPLGEILLLGNNERLKVD 310
+ + P ++ +G E + D
Sbjct: 1318 GKP--YLP--NMVRIGKKENISPD 1337
Score = 40 (19.1 bits), Expect = 3.2e-37, Sum P(4) = 3.2e-37
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 164 NEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHM 210
+ ++ YF +K IQ +V KS FL+ + +N + S+H+
Sbjct: 309 DSLEDIENYFPTFQSK-IQ-EVLLKSSSKFFLLRKINNVKYTASIHV 353
Score = 40 (19.1 bits), Expect = 3.2e-37, Sum P(4) = 3.2e-37
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 2290 LRTGKLGKDVYG--RVAKRFDGYTPWKEFVESLSINMGLESYRGSVLQ 2335
L K G V G ++ K+ + P+ ++V S++ + ++S SVL+
Sbjct: 1605 LTRAKFGLFVIGNSKLLKKDRTWGPFCQYVHSINSMVSIDSKGISVLE 1652
Score = 37 (18.1 bits), Expect = 6.5e-37, Sum P(4) = 6.5e-37
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 78 GMEKISNAPFAQVVAFEDSKPYGSMLYDVKVD 109
G++KI + +F++ Y M +++ V+
Sbjct: 1068 GLDKIKMIDGPTIHSFKEISDYSIMKFEIDVN 1099
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 411 (149.7 bits), Expect = 3.4e-37, Sum P(4) = 3.4e-37
Identities = 101/282 (35%), Positives = 158/282 (56%)
Query: 555 LKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 614
++ A++ FST S+S + N +++DE+ Q E S IPL + I+ +L GD
Sbjct: 1507 IRNANIVFSTLSASGSGSVRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDPL 1566
Query: 615 QLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDS 674
QLP + S S E SLFE QYRMHP+IS FP++ FY++++ D
Sbjct: 1567 QLPPTIFSSGSAENGLNISLFERLSKVLPVEMLNT-QYRMHPTISRFPSNQFYKDRLLDG 1625
Query: 675 PTVEKRSYEKR-FLPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWI 733
V+ Y + F YGP F +V +EE + S +N +E+++V ++ L + +
Sbjct: 1626 DNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDYP 1685
Query: 734 NSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRS 793
K K S GI++PY Q + I+E+ K N ++ ++DG QG E+DIII+S VRS
Sbjct: 1686 ECK-KFSFGIITPYKLQKSEIKEQ--HKQFNYP-LNIETSTIDGVQGSEKDIIILSCVRS 1741
Query: 794 NNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVW 835
IGF+S+ RR+NVALTRA+ L+++GN + L ++R+ W
Sbjct: 1742 ER---IGFLSDRRRINVALTRAKFGLFVIGNSKLLKKDRT-W 1779
Score = 126 (49.4 bits), Expect = 3.4e-37, Sum P(4) = 3.4e-37
Identities = 40/128 (31%), Positives = 64/128 (50%)
Query: 153 FVSVANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHMKG 212
F+ V+N T E++ + FK + T QI ++ + R + S+ ++
Sbjct: 1336 FIKVSNSTTFIRELEATEE-FKNSKTLLNQILQPSLEVYNLMTSMRMEIPSLLRSICIQE 1394
Query: 213 -NLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTPTIVAIK 269
N + + S + LI GPPGTGKT T+ LL ILL + KF+ LVC P+ ++
Sbjct: 1395 LNASQFNAIETSLSKKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGPSHASVD 1454
Query: 270 ELASRVVK 277
E+A R +K
Sbjct: 1455 EVAKRCLK 1462
Score = 44 (20.5 bits), Expect = 3.4e-37, Sum P(4) = 3.4e-37
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 34 EDIFNEDLFKDKVKRIPFSFRSVGQYFESFVF---PLLEETRANLMSGMEKISN 84
E + N +LFK + S ++G +SF+ L+ + + +S +KISN
Sbjct: 802 EYVMNVELFKLPLGHKNESDNTIGTLIKSFIIHIKSLVLDYKDLSLSNSQKISN 855
Score = 40 (19.1 bits), Expect = 3.4e-37, Sum P(4) = 3.4e-37
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 2290 LRTGKLGKDVYG--RVAKRFDGYTPWKEFVESLSINMGLESYRGSVLQ 2335
L K G V G ++ K+ + P+ ++V S++ + ++S SVL+
Sbjct: 1757 LTRAKFGLFVIGNSKLLKKDRTWGPFCQYVHSINSMVSIDSKGISVLE 1804
Score = 40 (19.1 bits), Expect = 8.7e-37, Sum P(4) = 8.7e-37
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 38 NEDLFKDKVKRIPFSFRSVGQYFESFVFPLLEETRAN 74
N +L K ++ FS G++F++ V T+ N
Sbjct: 1040 NSELAKKNRTKLEFSNIVKGKFFDNLVSNFESTTKIN 1076
Score = 39 (18.8 bits), Expect = 4.3e-37, Sum P(4) = 4.3e-37
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 1176 SLIDTDDID-----DAEKL---KDIPNSFIDI 1199
S+ D DD D D+ L KD PN+ I+I
Sbjct: 1879 SISDDDDEDETVSPDSNNLIIDKDFPNTLINI 1910
Score = 39 (18.8 bits), Expect = 4.3e-37, Sum P(4) = 4.3e-37
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 1134 KTERVILRQLFVTVSPKLC-FAVKQHISHMKSSTIGGKFATEGSLIDTDDI 1183
K ++ + QLF F K++I + S+ GG G+L+ I
Sbjct: 2197 KRNKLTIAQLFYQFFYYYSTFNYKENIISISHSSGGGSLCENGALLKRSTI 2247
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 395 (144.1 bits), Expect = 6.8e-37, Sum P(2) = 6.8e-37
Identities = 109/328 (33%), Positives = 167/328 (50%)
Query: 525 LRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVI 584
L++L S EL+ + L +R L A + T + +K N L I
Sbjct: 558 LQQLKSELGELSSQDEKKFKQLTKAAEREILSNADVVCCTCVGAGDPRLAKLKFRNVL-I 616
Query: 585 DEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXX 644
DE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFE
Sbjct: 617 DESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLGLT 675
Query: 645 XXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYG-PYSFINVFGG 703
+QYRMHP +S FP++ FYE + + T+++R P P+ P F + G
Sbjct: 676 PIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVADMPMMFWSNLGN 735
Query: 704 REEFIEH-SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQ---VAAIQEKLG 759
E S N E S V K++ +K + + IG+V+PY Q + + + G
Sbjct: 736 EEISASGTSYLNRTEASNVEKLVTRFFKAGVKPGD---IGVVTPYEGQRSYIVSTMQNTG 792
Query: 760 SKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCL 819
+ + + V+V SVD FQG E+D I++S VRSN IGF+S+PRR+NVALTRA++ +
Sbjct: 793 T-FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDPRRLNVALTRAKYGV 851
Query: 820 WILGNERTLTRNRSVWKALVDDAKARQC 847
I+GN + L+++ +W L+ + R+C
Sbjct: 852 VIIGNPKVLSKHE-LWHHLLIHFRDRKC 878
Score = 103 (41.3 bits), Expect = 6.8e-37, Sum P(2) = 6.8e-37
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 214 LKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPTIVAIKELA 272
+ IK +L T + LI GPPGTGKT T + ++ L +M + LVC P+ VA+ +L
Sbjct: 457 ISAIKAVLSTP----LSLIQGPPGTGKTVTSATIIYHLAKMNGSQVLVCAPSNVAVDQLC 512
Query: 273 SRV 275
RV
Sbjct: 513 ERV 515
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 413 (150.4 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 109/311 (35%), Positives = 163/311 (52%)
Query: 557 RASLFFSTASSS-YMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQ 615
R+ + ST S S Y A K + +++DEAAQ E + IPL+ +K +L GD Q
Sbjct: 1584 RSQIILSTLSGSGYDYLFTATKNFDLVIVDEAAQAVELSTLIPLR-HDVKKCILVGDPQQ 1642
Query: 616 LPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSP 675
LP SKV+ + + SLF+ QYRMHP IS FP+ FY ++ D
Sbjct: 1643 LPPTTISKVATKFQYEISLFQRLMNCGMAPTVLKTQYRMHPMISKFPSKIFYRGELEDGK 1702
Query: 676 TVEKRSYEKRFL--PGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKG 731
V R Y++ + +GP F ++F E S RN EV + I+ L
Sbjct: 1703 NV--REYKQDYYNDSASRFGPLVFYDLFDKHGEVRSSFFSLRNPTEVKLAKLIVDQLISN 1760
Query: 732 WINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTV 791
+ N+K+ L IG+++PY +Q + Y N V+V ++DGFQG E+D +I S+V
Sbjct: 1761 YPNTKD-LEIGVITPYKSQSVDLFNAFKG-YQN-----VEVSTIDGFQGKEKDFVIFSSV 1813
Query: 792 RSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAK-ARQCFFN 850
R+++G SIGF+S+ RR+NV LTRA++ + ILGN L+ N W LV+D + C+F
Sbjct: 1814 RAHSGHSIGFLSDIRRMNVGLTRAKYSMVILGNSSLLSNNDD-WGNLVNDLRQTNNCYFP 1872
Query: 851 ADDDKDLGKSI 861
K + K +
Sbjct: 1873 ISS-KSIDKGV 1882
Score = 94 (38.1 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 52/198 (26%), Positives = 87/198 (43%)
Query: 146 RVGRMWTFVSVANVTEDENEIDTSPTYFKVN-ATKEIQIDV---SKKSLFVIFLINRTSN 201
++G +W V +++ E K+ T I + S S F I
Sbjct: 1306 KIGNIWNIQKVTSLSTISREYMALHMVGKIPLGTSIISPHLYINSNDSSSSTFKIPDKLF 1365
Query: 202 RRIWNSLHMKGNLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLL----VILLQMKF- 256
+++ +SL+ + L I L G + L+ GPPGTGKTKT+ LL +L ++
Sbjct: 1366 QKLRSSLN-ESQLSAIASTLKNLGGFS--LLQGPPGTGKTKTILSLLSVFTTVLTNIEKS 1422
Query: 257 ----RTLVCTPTIVAIKELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKV--- 309
+ LVC P+ A+ E+A R+ K ++++ F P+ I +GN +
Sbjct: 1423 HSDPKILVCAPSNAAVDEIALRIKK--DGLIDKNGNK--FKPV--ICRIGNQSHIHPSVQ 1476
Query: 310 DSGVEEIYL-DYRVKRLA 326
D VE + L +Y+ K A
Sbjct: 1477 DISVESLILGEYKDKNSA 1494
Score = 54 (24.1 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 28 VFSWSLEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVFPLLEETRANLMSGMEK 81
+ W + F +D ++K +P +F + Y + F L+EE RA ++ +++
Sbjct: 1140 ILDW-VPTKFADDPPMSELKPVPGTFDDLKHYIDIFQPLLIEEFRAQVIRNLDE 1192
Score = 39 (18.8 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 522 HFVLRKLLSSFNELNLPSAVEKDLLEDLLKRF 553
HF + KL SF+ E D+L DL +RF
Sbjct: 51 HFEIAKL--SFHIFEYE---EDDVLPDLYQRF 77
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 395 (144.1 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 111/342 (32%), Positives = 172/342 (50%)
Query: 510 IKYLLHKRRSECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSY 569
+++L +SE H L++L EL+ + L+ +R + A + T +
Sbjct: 583 VRHLDTSEKSELH-KLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAA 641
Query: 570 MLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEAC 629
L + ++IDE+ Q E E IPL L G+K VL GD CQL ++ K + A
Sbjct: 642 DLRLSNFR-FRQVLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAG 699
Query: 630 FGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPG 689
+SLFE +QYRMHP++S FP++ FYE + + T+ +R P
Sbjct: 700 LAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPW 759
Query: 690 PMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPY 747
P+ F V G+EE S N E + V K++ K + + IG+++PY
Sbjct: 760 PVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQ---IGVITPY 816
Query: 748 IAQVAAIQEKLGSK-YVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNP 805
Q A I + + + ++V SVD FQG E+D II+S VRSN IGF+++P
Sbjct: 817 EGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 876
Query: 806 RRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQC 847
RR+NVALTRAR+ + ILGN + L++ + +W L+ K +C
Sbjct: 877 RRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHEC 917
Score = 99 (39.9 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 35/103 (33%), Positives = 58/103 (56%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPTIVAIKELASRVVKLVKESVERDC 287
+ LI GPPGTGKT T + ++ + Q + + LVC P+ VA+ +LA ++ V R C
Sbjct: 505 ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKI-SATGLKVVRLC 563
Query: 288 ---RDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRVKRLAD 327
R+A+ P+ E L L R +D+ E+ L +++++L D
Sbjct: 564 AKSREAVSSPV-EYLTLHYQVR-HLDTS-EKSEL-HKLQQLKD 602
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 400 (145.9 bits), Expect = 6.0e-36, Sum P(3) = 6.0e-36
Identities = 108/283 (38%), Positives = 157/283 (55%)
Query: 577 KPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFE 636
+P + ++IDEA+Q KE+E+ IP+ L +L GD QLP V S+ + E F +SL
Sbjct: 1953 EPFSCVIIDEASQAKETETLIPM-LYRCPSVILVGDPNQLPPTVVSQKAKEFGFDQSLMA 2011
Query: 637 XXXXXXXXXXXX-------XIQYRMHPSISFFPNSYFYENKI-HDSPTVEKRSYEKRFLP 688
+QYRMHP I FP+ Y Y + + +D T +KR L
Sbjct: 2012 RLCKSLHPSNSKLPPILLLSMQYRMHPDICEFPSKYIYNSALKNDCETAQKRCS----LS 2067
Query: 689 GPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYI 748
P + PY +V GRE S N EVS+V +LL L + ++ + +G+++PY
Sbjct: 2068 WP-FKPYKVFDVMDGRETKERDSFINHKEVSLV-GLLLKL----LCKEQAVRVGVITPYN 2121
Query: 749 AQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVR-SNNGGSIGFISNPRR 807
AQ I + + + +N V+V +VDGFQG E D II+S VR S+ GSIGF+ N +R
Sbjct: 2122 AQKHRILDAIKTSGINKQ-LQVEVDTVDGFQGREMDCIIVSCVRASSEMGSIGFVGNRQR 2180
Query: 808 VNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFN 850
+NV +TRA+ L+ILG+ RTL R +S W AL++DA R+C N
Sbjct: 2181 MNVTITRAKFSLFILGHLRTL-REQSDWGALIEDAGRRECIIN 2222
Score = 105 (42.0 bits), Expect = 6.0e-36, Sum P(3) = 6.0e-36
Identities = 66/250 (26%), Positives = 100/250 (40%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQM----------------KFRTLVCTPTIVAIKELASR 274
LI GPPGTGK+KT+ LL LL + R L+C P+ AI L +
Sbjct: 1741 LIHGPPGTGKSKTIGGLLYKLLSSATNSSATVGNLHSKSRRTRVLLCAPSNAAIDSLMKK 1800
Query: 275 VVKLVKESVERDCRDALFFPLGE-----ILLLGNNERLKVDSGVEEIYLDYRVKRLADCF 329
V+ + KE CR+ + P G ++ LGN ER + ++ LD++ K A
Sbjct: 1801 VILIFKEK----CRN-INAPQGNCGDINLVRLGN-ERT-ISKSLKPFSLDHQTKARAQR- 1852
Query: 330 APLTGWSHCFASMVEFLDNCVSQYHTYMENESMKQSEDINGDIIKEKECGKEADASDVEI 389
A T S E LD + ++ ++ K S + + ++K+ KE + +I
Sbjct: 1853 AQQTVESDVHRRK-EQLDQMIENL-SHQCAKTQKNSTEFKNLLEQKKQFLKEREGLSRQI 1910
Query: 390 KPFLEFVRERFKCII-NGDIIKEKECGKEADASDVEIKPFLEFVRERFKCIAAPLRSCIF 448
K +E ++ N +I C S V F E F C+ S
Sbjct: 1911 KECRGRRQESQALVLQNAHVIC---CTLSTSGSIVLENAFRRLGHEPFSCVIIDEASQAK 1967
Query: 449 NFCTHIPKCY 458
T IP Y
Sbjct: 1968 ETETLIPMLY 1977
Score = 51 (23.0 bits), Expect = 6.0e-36, Sum P(3) = 6.0e-36
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 40 DLFKDKVKRIPFSFRSVGQYFESFVFPLLEETRANLMSGMEKISN 84
DL + +K +P +F S +YF + ++PLL L++ E+++N
Sbjct: 1514 DLCQLPLKEVPVNFSSYLEYFNT-LYPLL------LINAFEEMAN 1551
Score = 39 (18.8 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 286 DCRDALFFPLGEIL 299
D D +F PL EIL
Sbjct: 111 DIHDRIFIPLCEIL 124
Score = 38 (18.4 bits), Expect = 1.3e-34, Sum P(3) = 1.3e-34
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 131 LVLADAKPETASDLQRVGRMWTFVSVANVTEDENEIDTSPTYFKVNATKEI---QIDVSK 187
L+L +A E A++ + GR+ ++ V + E N T+ F ++E QI +
Sbjct: 1540 LLLINAFEEMANEWLKEGRVKLYLKVQGI-EYSNR--TASASFIAGLSQECDVKQIYPKE 1596
Query: 188 KSLFVIFLINRT 199
L +++L + T
Sbjct: 1597 DDLVLLWLPDNT 1608
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 396 (144.5 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 99/272 (36%), Positives = 152/272 (55%)
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKVSDEACFGRSLFEXXXX 640
++IDE+ Q E E IP+ + G K +L GD QL P ++E K +D A +SLFE
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 641 XXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYG-PYSFIN 699
+QYRM+P +S FP++ FYE + + T+E+R+ P P+ G P F
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 700 VFGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQE- 756
+G REE + S N +E +I+ L++ + ++ IG+++PY Q A I +
Sbjct: 687 NYG-REEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQY 742
Query: 757 -KLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
++ V+V SVD FQG E+D II+S VR+N +IGF+ +PRR+NV LTRA
Sbjct: 743 MQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRA 802
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQC 847
++ L ILGN R+L RN ++W L+ + + C
Sbjct: 803 KYGLVILGNPRSLARN-TLWNHLLIHFREKGC 833
Score = 99 (39.9 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPTIVAIKELASRV 275
+ LI GPPGTGKT T + ++ L ++ K R LVC P+ VA+ LA+++
Sbjct: 425 LSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKL 472
Score = 38 (18.4 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 12/79 (15%), Positives = 31/79 (39%)
Query: 1290 IKGGLQSIEVVNGKLNREDYVNLSETRNSSLSRQKRERIYDIFESYEQMKMRNGEFDLAD 1349
++G L ++++ +L R N+ + + + F+ ++ M + + D
Sbjct: 835 VEGTLDNLQLCTVQLVRPQPRKTERPMNAQFNVESEMGDFPKFQDFDAQSMVSFSGQIGD 894
Query: 1350 LVNDLHHRLKEESYKGDEF 1368
N + SY +E+
Sbjct: 895 FGNAFVDNTELSSYINNEY 913
Score = 38 (18.4 bits), Expect = 4.6e-29, Sum P(3) = 4.6e-29
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 544 DLLEDLLKRFCLKRASL 560
D ++D LK+F + + S+
Sbjct: 359 DRMQDALKKFAIDKKSI 375
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 431 (156.8 bits), Expect = 3.3e-35, Sum P(3) = 3.3e-35
Identities = 112/326 (34%), Positives = 176/326 (53%)
Query: 524 VLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKP-LNF- 581
+L + L E + D+L+ ++ L+ A + +T S+S H + + L F
Sbjct: 1454 MLEQSLDDMRERQRSTNRNLDVLKKQIQNQLLQEADIVCATLSASG--HELLLNAGLTFR 1511
Query: 582 -LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLF-EXXX 639
++IDEAAQ E S IPL+ G + V+ GD QLP V SK S + + +SL+
Sbjct: 1512 TVIIDEAAQAVELSSIIPLKY-GCESCVMVGDPNQLPPTVLSKTSAKFGYSQSLYVRMFK 1570
Query: 640 XXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFIN 699
IQYRM+P IS FP+ +FY +K+ D P + + + + P G Y F N
Sbjct: 1571 QHNESACLLSIQYRMNPEISRFPSKFFYNSKLLDGPNMSAVT-SRPWHEDPQLGIYRFFN 1629
Query: 700 VFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLG 759
V G S N+ E S ++ + L + ++N + IG+V+PY +QV ++ +
Sbjct: 1630 VHGTEAFSNSKSLYNVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQ 1689
Query: 760 SKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCL 819
KY + + + +VDGFQG E+DIII S VRS+ G IGF+ + RR+NVALTRA+ L
Sbjct: 1690 RKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSL 1749
Query: 820 WILGNERTLTRNRSVWKALVDDAKAR 845
+I+GN + L + ++ +L++DAK R
Sbjct: 1750 YIVGNSKPLMQE-DIFYSLIEDAKTR 1774
Score = 67 (28.6 bits), Expect = 3.3e-35, Sum P(3) = 3.3e-35
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 231 LIWGPPGTGKTKTV-SMLLVIL 251
LI GPPGTGKTKT+ M+ +L
Sbjct: 1290 LIQGPPGTGKTKTILGMIGAVL 1311
Score = 47 (21.6 bits), Expect = 3.3e-35, Sum P(3) = 3.3e-35
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 255 KFRTLVCTPTIVAIKELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKV 309
K + L+C P+ AI E+ R+ K V D FFP +++ +G + + V
Sbjct: 1331 KNKILICAPSNAAIDEILLRI----KAGVY-DHEGIKFFP--KVIRVGFGDSISV 1378
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 418 (152.2 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 110/309 (35%), Positives = 166/309 (53%)
Query: 542 EKDLLEDLLKRFCLKRASLFFSTASSSYMLHS-VAMKPLNF--LVIDEAAQLKESESTIP 598
E DLL ++ LK+A + +T S S H VA LNF ++IDEAAQ E ++ IP
Sbjct: 1334 EVDLLRKKAQKAILKQADVVCATLSGSG--HDLVAHSSLNFSTVIIDEAAQAVELDTIIP 1391
Query: 599 LQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLF-EXXXXXXXXXXXXXIQYRMHPS 657
L+ G K +L GD QLP V SK + + +SLF IQYRMHP
Sbjct: 1392 LRY-GAKKCILVGDPNQLPPTVLSKKAASLNYSQSLFVRIQKNFSNQMCLLSIQYRMHPD 1450
Query: 658 ISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIEHSCRNMVE 717
IS FP+ FY++++ D + +++ + + P + Y +V G S N+ E
Sbjct: 1451 ISHFPSKKFYDSRLEDGDNMAEKTQQVWHV-NPKFTQYRLFDVRGKERTSNTMSTYNLEE 1509
Query: 718 VSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDG 777
V ++ ++ L + + IG+++PY +Q+ ++ KY S + + +VDG
Sbjct: 1510 VEYLVNMVDELLNKFPDVNFTGRIGVITPYRSQLHELRRAFKVKYGKSFMSTIDIQTVDG 1569
Query: 778 FQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKA 837
FQG E+DII S V+S + IGF+ + RR+NVALTRAR L I+GN TL + +W +
Sbjct: 1570 FQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTRARSSLLIIGNMETL-KTDDLWGS 1628
Query: 838 LVDDAKARQ 846
LVDDA +R+
Sbjct: 1629 LVDDALSRK 1637
Score = 79 (32.9 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 42/177 (23%), Positives = 76/177 (42%)
Query: 218 KELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
K ++C LI GPPGTGKTKT+ ++ LL R + P + + + +
Sbjct: 1136 KAIMCALDNNGFTLIQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQQSKSTESKQQIL 1195
Query: 278 LVKES---VER---DCRDALFFPLGE-----ILLLGNNERLKVDSGVEEIYLDYRV-KRL 325
L S V+ + GE ++ +GN E + V V ++ L+Y+ K+L
Sbjct: 1196 LCAPSNAAVDEVLLRLKRGFLLENGEKYIPRVVRIGNPETINVS--VRDLSLEYQTEKQL 1253
Query: 326 ADCFAPLTGWSHCFASMVEFLDNCVSQYHTYMENESMKQSEDINGDIIKE-KECGKE 381
+ + + S+ E + Y + E +++ D+ D+ ++ K GKE
Sbjct: 1254 LE----VNQGAIDLGSLQELTRWRDTFYDCIQKIEELEKQIDVARDVAEDTKSLGKE 1306
Score = 45 (20.9 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 112 RNRFSNLGREPYKTLPGDILVLADAKPETASDLQRVGRMWTFVSVANVTEDENEIDTSPT 171
R + ++L + K L ++L A + +T + R+ M +T + I SPT
Sbjct: 729 RKQKAHLSADQCKQL-ANVLTQASPEAKTVLEQHRLSEMRKTKKQTELTNSAHVIKPSPT 787
Query: 172 ---YFKVNATK 179
K N TK
Sbjct: 788 PQITVKQNTTK 798
Score = 38 (18.4 bits), Expect = 7.0e-31, Sum P(3) = 7.0e-31
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 371 DIIKEKECGKEADASDVEIK 390
DII+ + C + S EIK
Sbjct: 1103 DIIRARPCSQPVKHSSSEIK 1122
Score = 38 (18.4 bits), Expect = 7.0e-31, Sum P(3) = 7.0e-31
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 407 DIIKEKECGKEADASDVEIK 426
DII+ + C + S EIK
Sbjct: 1103 DIIRARPCSQPVKHSSSEIK 1122
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 381 (139.2 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 117/347 (33%), Positives = 177/347 (51%)
Query: 510 IKYL-LHK--RRSECHFVLRKLLSSFNELN-LPSAVEKDL--LEDLLKRFCLKRASLFFS 563
+ +L LH R E + L+KL +E L SA EK L+ + L+ A +
Sbjct: 537 VSFLALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRNLKRAAENQLLEAADVICC 596
Query: 564 TASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 623
T + +K ++IDE+ Q E E +P+ L G K +L GD CQL +V K
Sbjct: 597 TCVGAGDGRLSRVK-FTSILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCK 654
Query: 624 VSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYE 683
+ A +SLFE +QYRMHP +S FP+++FYE + + E R +
Sbjct: 655 KAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLK 714
Query: 684 KRFLPGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSI 741
F P P F V G+EE S N E + V KI K I ++ I
Sbjct: 715 LDF-PWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---I 770
Query: 742 GIVSPYIAQVAAIQEKLGSK-YVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGGSI 799
GI++PY Q A + + + + ++S + +++ SVD FQG E+DIII+S VRSN I
Sbjct: 771 GIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGI 830
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
GF+++PRR+NVALTRA+ + I+GN + L + + +W L++ K R+
Sbjct: 831 GFLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQ-LWNHLLNFYKDRK 876
Score = 101 (40.6 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 27/92 (29%), Positives = 51/92 (55%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPTIVAIKELASRVVKLVKESVERDC 287
+ LI GPPGTGKT T + ++ L+++ T LVC P+ A+ +L ++ + V R C
Sbjct: 468 LSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHR-TNLKVVRVC 526
Query: 288 ---RDALFFPLGEILLLGNNERLKVDSGVEEI 316
R+A+ P+ + L ++ +S ++++
Sbjct: 527 AKSREAIDSPVSFLALHNQIRNMETNSELKKL 558
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 431 (156.8 bits), Expect = 2.3e-34, Sum P(4) = 2.3e-34
Identities = 120/343 (34%), Positives = 182/343 (53%)
Query: 514 LHKRRSECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHS 573
++K+RSE + +KL + ++ + ++ ++ R L A + ST S S H
Sbjct: 1473 INKKRSE---LAKKLDEQREKASIANRTKEINRRNIQARI-LSEAQVLCSTLSGS--AHD 1526
Query: 574 -VAMKPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
VA + F ++IDEA Q E + IPL+ G K ++ GD QLP V S+ + +
Sbjct: 1527 LVANLSVQFDQVIIDEACQCLELSAIIPLRY-GCKKCIMVGDPNQLPPTVLSQAAASYNY 1585
Query: 631 GRSLF-EXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPG 689
+SLF +QYRMHP IS FP+S FY +K+ D + + + + +
Sbjct: 1586 EQSLFVRMQKNHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELN-TRPWHKD 1644
Query: 690 PMYGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYI 748
P PY F ++ G E+ + S N E V +++ L + K IGI+SPY
Sbjct: 1645 PPLTPYRFFDILGKHEKNELTRSLFNTDEAIVALQLTDKLMQLLPQDKFSGKIGIISPYK 1704
Query: 749 AQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRV 808
Q+ I+E KY + +VDGFQG E++III+S VR++ G++GF+S+ RR+
Sbjct: 1705 EQIRKIKEVFVRKYGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRM 1764
Query: 809 NVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNA 851
NVALTRA+ LWILGN+ +L+RN VWK L+ DA R C A
Sbjct: 1765 NVALTRAKTTLWILGNKDSLSRNE-VWKKLLTDAGERNCITQA 1806
Score = 66 (28.3 bits), Expect = 2.3e-34, Sum P(4) = 2.3e-34
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 231 LIWGPPGTGKTKTV 244
LI GPPGTGKTKT+
Sbjct: 1316 LIQGPPGTGKTKTI 1329
Score = 52 (23.4 bits), Expect = 2.3e-34, Sum P(4) = 2.3e-34
Identities = 17/70 (24%), Positives = 37/70 (52%)
Query: 255 KFRTLVCTPTIVAIKELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVE 314
K + L+C P+ A+ EL R+ ++ V + + PL +++ LG ++ ++S V
Sbjct: 1360 KAKILICAPSNAAVDELVLRL----RDGVRNSSGEHM--PL-KVVRLGRSDA--INSSVR 1410
Query: 315 EIYLDYRVKR 324
++ L+ V +
Sbjct: 1411 DLTLEELVDK 1420
Score = 41 (19.5 bits), Expect = 2.3e-34, Sum P(4) = 2.3e-34
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 95 DSKPYGSMLYD-VKVDCWRNRFSNLGR---EPYKTLPGDILVLA--DAKPETASDLQR 146
D KP+ ++ VD + + F+++ + + K D++VLA D + ASD++R
Sbjct: 1138 DEKPFELLIGSRTSVDGFFDVFASMEKTVLQDRKIGDSDLVVLALKDESLQHASDIRR 1195
Score = 40 (19.1 bits), Expect = 3.9e-33, Sum P(4) = 3.9e-33
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 354 HTYMENESMKQSEDING---DIIKEKECGKEADASDVEIKPFLEFVRERFKCIINGDIIK 410
H ++ + +S+ IN D+ E+ KE E+ E KCI D ++
Sbjct: 1391 HMPLKVVRLGRSDAINSSVRDLTLEELVDKELQTKQTEVVIDPNIRLEHTKCINERDELR 1450
Query: 411 EK---ECGKEADASDVEIK 426
++ E +E + +++E K
Sbjct: 1451 KRLATESLEEKEITELEEK 1469
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 377 (137.8 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 113/326 (34%), Positives = 166/326 (50%)
Query: 525 LRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF--L 582
LRKL +F L+ L +++ L++A + +T + + F +
Sbjct: 647 LRKLKEAFGSLSNEDEKRYIYLRRMMEMAILRKADVICATCVGA---GDPRLSQFRFPHI 703
Query: 583 VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKVSDEACFGRSLFEXXXXX 641
+IDE+ Q E E IPL + G K +L GD QL P ++ KV D A +SLFE
Sbjct: 704 LIDESTQASEPECLIPLMM-GAKQVILVGDHRQLGPVLLCKKVVD-AGLSQSLFERLISL 761
Query: 642 XXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPM-YGPYSFINV 700
IQYRMHPS++ FP++ YE ++ + R + +F P P P F N
Sbjct: 762 GHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKF-PWPQPKDPMFFFNC 820
Query: 701 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLG 759
G E S N E S+ KI+ + + S IGI++PY Q A I +
Sbjct: 821 TGSEEISSSGTSFINTTEASICEKIVTKFLE--LGSLPG-QIGIITPYEGQRAYITSHMQ 877
Query: 760 -SKYVNSAGF-AVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARH 817
S +N + +++V SVD FQG E+D II+S VRSN+ IGF+ +PRR+NVALTRAR
Sbjct: 878 KSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRRLNVALTRARF 937
Query: 818 CLWILGNERTLTRNRSVWKALVDDAK 843
L ILGN + L+++ +W +L+ K
Sbjct: 938 GLIILGNAKVLSKD-PLWNSLISHFK 962
Score = 99 (39.9 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 36/115 (31%), Positives = 63/115 (54%)
Query: 227 ATVQLIWGPPGTGKTKTVSML---LVILLQMKFRTLVCTPTIVAIKELASRV----VKLV 279
A + LI GPPGTGKT S + LV ++ + LVCTP+ VAI +L ++ +K+V
Sbjct: 551 APLSLIQGPPGTGKTVISSFIIHHLVKYVKGNDKVLVCTPSNVAIDQLTGKLHEIGLKVV 610
Query: 280 KESVERDCRDALFFPLGEILLLGNNERLKVDS-GVEEIYLDYRVKRLADCFAPLT 333
+ S + R+ + P+ + L + + K+D G E+ ++++L + F L+
Sbjct: 611 RLSSK--LREEVASPVEHLTL--HKQVYKLDQMGDGELG---KLRKLKEAFGSLS 658
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 430 (156.4 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 113/348 (32%), Positives = 192/348 (55%)
Query: 509 DIKYLLHKRRSECHFVLRKLLSSFNELNLPSAVE---KDLLEDLLKRFCLKRASLFFSTA 565
DI L K R E ++ +L +E+ ++V +DL + L + + ST
Sbjct: 1511 DISKLQLKIR-ELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTL 1569
Query: 566 SSSY--MLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 623
S S +L ++ +K + ++IDEA Q E S IPL+ G K ++ GD QLP V S
Sbjct: 1570 SGSAHDVLATMGIK-FDTVIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSG 1627
Query: 624 VSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYE 683
+ + +SLF +QYRMHPSIS FP+S FY+ ++ D P ++ +
Sbjct: 1628 AASNFKYNQSLF-VRMEKNSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKR 1686
Query: 684 KRFLPGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLS- 740
P+ PY F ++ GR+E S NM E+ V ++++ L++ + N +
Sbjct: 1687 PWHQLEPL-APYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGK 1745
Query: 741 IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNG-GSI 799
IGI+SPY Q+ ++++ + ++ ++DGFQG E++II+IS VR+++ S+
Sbjct: 1746 IGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSV 1805
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQC 847
GF+ + RR+NVALTRA+ +W+LG++R+L +++ +W+ L++DAK R C
Sbjct: 1806 GFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSC 1852
Score = 69 (29.3 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMK 255
LI GPPGTGKTKT+ ++ L K
Sbjct: 1354 LIQGPPGTGKTKTILGIIGYFLSTK 1378
Score = 44 (20.5 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 15 KRAVPYDY--GFTDTVFSWSLEDIF 37
+R VP+++ F D V W +E +F
Sbjct: 138 QRHVPHEHVAKFNDIVCQWRVEAVF 162
Score = 43 (20.2 bits), Expect = 6.0e-31, Sum P(4) = 6.0e-31
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 364 QSEDINGDIIKEKECGKEADASDVEIKPFLEFVRERFKCIING--DIIKEKECGKEADAS 421
Q+ DING ++K + + A K LE +R+R +N +II + + + ++
Sbjct: 1080 QTVDINGKVVKRQTAAELA-------KQELEHMRKRLNVDMNPLYEIILQWDYTRNSEYP 1132
Query: 422 DVE 424
D E
Sbjct: 1133 DDE 1135
Score = 42 (19.8 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 168 TSPTYFKVNATKEIQIDVSKKSL-FVIFLINRTSNRRIWNSLHMKGNLKIIKELL 221
T P Y ++ +K IQ+ V K S+ F+ + N S + I + M +++ +L
Sbjct: 430 TLPFYHALSPSKRIQM-VRKVSMAFLRIIANYPSLKSIPKACLMNSATALLRAVL 483
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 397 (144.8 bits), Expect = 2.6e-32, Sum P(4) = 2.6e-32
Identities = 106/311 (34%), Positives = 165/311 (53%)
Query: 540 AVEKDLLEDLLKRFCLKRASLFFSTASSSY--MLHSVAMKPLNFLVIDEAAQLKESESTI 597
A E ++ +++ L A + +T S + M S+ ++ ++IDEAAQ E + I
Sbjct: 1534 AREAEIKRRNIQQSILSEAHVLCATLSGAGHDMFKSLQVE-FETVIIDEAAQCVELSALI 1592
Query: 598 PLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLF-EXXXXXXXXXXXXXIQYRMHP 656
PL+ G +L GD QLP V S+ + + +SLF QYRMHP
Sbjct: 1593 PLKY-GASKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQNHPGKVHLLDCQYRMHP 1651
Query: 657 SISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIE-HSCRNM 715
IS +P+ FYE + D + K ++ + P+ GPY F +V G +E S N
Sbjct: 1652 EISLYPSKEFYEGLLADGSDMAKLR-QQPWHDNPLLGPYRFFDVEGIQERGSRGQSLVNT 1710
Query: 716 VEVSVVMKILLNLYKGWINSKE-KLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMS 774
E++V ++I + +S + K IGI++PY AQ+ A+++K ++ ++ +
Sbjct: 1711 NEINVAIQIYTKFQADYASSIDMKGKIGIITPYKAQLFALRQKFQERWGEGVLEDIEFNT 1770
Query: 775 VDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSV 834
D FQG E +III S VR++ G IGF+++ RR+NV LTRAR LWILG+ R L R
Sbjct: 1771 TDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRAL-RQGEF 1829
Query: 835 WKALVDDAKAR 845
W L++D+KAR
Sbjct: 1830 WNKLIEDSKAR 1840
Score = 70 (29.7 bits), Expect = 2.6e-32, Sum P(4) = 2.6e-32
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMK 255
L+ GPPGTGKTKT+ ++ LL K
Sbjct: 1346 LVQGPPGTGKTKTIIAMVGALLTGK 1370
Score = 54 (24.1 bits), Expect = 2.6e-32, Sum P(4) = 2.6e-32
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 254 MKFRTLVCTPTIVAIKELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGV 313
M + LVC P+ A+ EL R+ +K++ + +L LG ++ +++ V
Sbjct: 1389 MAQKLLVCAPSNAAVDELVLRLKAGIKDTNGNTHKI-------NVLRLGRSDA--INAAV 1439
Query: 314 EEIYLDYRVKRLADCFAPLTG 334
++ LD VK D + G
Sbjct: 1440 RDVTLDELVKEKMDAALNVNG 1460
Score = 50 (22.7 bits), Expect = 2.6e-32, Sum P(4) = 2.6e-32
Identities = 23/84 (27%), Positives = 37/84 (44%)
Query: 11 RSKKK---RAVPYDYGFTDTVFSWSLEDIFNEDLFKD---KVKRIPFSFRSVGQYFESFV 64
RSKK R P + + W DIF+E K K + S+ + Y E+F
Sbjct: 1098 RSKKDLRARITPPMERLHEAILEW---DIFHEGSDPPNGYKCKEVAKSYTNPVDYRETF- 1153
Query: 65 FPLL-EETRANLMSGMEKISNAPF 87
FP+L E + ++ ++ + PF
Sbjct: 1154 FPMLVNEAWRSFVTSKDESTAKPF 1177
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 364 (133.2 bits), Expect = 4.7e-32, Sum P(3) = 4.7e-32
Identities = 110/328 (33%), Positives = 166/328 (50%)
Query: 525 LRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVI 584
L KL S NEL++ + +L ++ L+ A + T + ++ ++I
Sbjct: 505 LLKLRSENNELSIQDEKKLRILVAAAEKELLRAAHVICCTCVGAGD-RRISKYKFRSVLI 563
Query: 585 DEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKVSDEACFGRSLFEXXXXXXX 643
DEA Q E E IPL L G K VL GD QL P ++ KV+ A +SLFE
Sbjct: 564 DEATQASEPECMIPLVL-GAKQVVLVGDHQQLGPVVMNKKVA-LASLSQSLFERLIILGN 621
Query: 644 XXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFG- 702
+QYRMHP +S FP++ FYE + + T +R R + P P S + +
Sbjct: 622 SPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERI--ARHVDFPWIQPDSPLMFYAN 679
Query: 703 -GREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLG 759
G+EE S N E S KI+ + + ++ IGIV+PY Q + I + +
Sbjct: 680 FGQEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQ---IGIVTPYDGQRSYIVQYMQ 736
Query: 760 SKYVNSAGF--AVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARH 817
+ AV+V SVD FQG E+D II+S VRS+ IGF+++PRR+NVALTRA++
Sbjct: 737 NNGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNVALTRAKY 796
Query: 818 CLWILGNERTLTRNRSVWKALVDDAKAR 845
+ +LGN + L ++ ++W V K +
Sbjct: 797 GVIVLGNPKVLAKH-ALWYHFVLHCKEK 823
Score = 90 (36.7 bits), Expect = 4.7e-32, Sum P(3) = 4.7e-32
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQMKFR-------TLVCTPTIVAIKELASRV 275
+ LI GPPGTGKT T + ++ L M+ R LVC P+ VA+ +LA ++
Sbjct: 409 LSLIQGPPGTGKTVTSASVVYHLATMQSRKRKSHSPVLVCAPSNVAVDQLAEKI 462
Score = 47 (21.6 bits), Expect = 4.7e-32, Sum P(3) = 4.7e-32
Identities = 19/84 (22%), Positives = 36/84 (42%)
Query: 1209 TFHKFLMMLDGTLCNSYFERFHNIWKNYGQLQNSKSVFIETIIRKKEVNYERFSSSYWPH 1268
+ KF + L F+R N+ ++ +QN+ S + + + +SSSY
Sbjct: 833 SLQKFSLTLTPPQKPQKFKRDLNVQRSLSPIQNAGSAMLPSFSNLPNL----YSSSYLEE 888
Query: 1269 FN--AQLARKLDPSRVFTEIISHI 1290
+N AQ R+ + F + S +
Sbjct: 889 WNVFAQYKRRESNATDFEDFRSQV 912
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 369 (135.0 bits), Expect = 5.8e-32, Sum P(3) = 5.8e-32
Identities = 102/291 (35%), Positives = 152/291 (52%)
Query: 576 MKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLF 635
+ P + +++DEA Q E E+ IPL + VL GD QLP ++S + E +G+SL
Sbjct: 2195 LDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLM 2253
Query: 636 -----------EXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIH-DSPTVEKRSYE 683
+ +QYRMHP I FP+SY Y+ + D T E R
Sbjct: 2254 ARLQRHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLKTDKATEENRCSS 2313
Query: 684 KRFLPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGI 743
+ P + PY +V G EE + S N EV +V++I+ + K IGI
Sbjct: 2314 E----WP-FQPYLVFDVGDGHEERDKDSFSNPQEVKLVLEIIRTI-KEKRKDLGLRRIGI 2367
Query: 744 VSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNG-GSIGFI 802
++PY AQ IQE+L + N++ +V +VD FQG E+D II++ VR+N+ GSIGF+
Sbjct: 2368 ITPYSAQKKKIQEELDRVFKNNS--PGEVDTVDAFQGREKDCIIVTCVRANSSKGSIGFL 2425
Query: 803 SNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADD 853
++ +R+NV +TRAR L+ILG +TL N+ W L+ DA+ R D
Sbjct: 2426 ASLQRLNVTITRARFSLFILGRLKTLMENKD-WNKLIQDAQRRGAIIKTSD 2475
Score = 96 (38.9 bits), Expect = 5.8e-32, Sum P(3) = 5.8e-32
Identities = 35/112 (31%), Positives = 51/112 (45%)
Query: 227 ATVQLIWGPPGTGKTKTVSMLLVILLQMKFRT---------------LVCTPTIVAIKEL 271
A + LI GPPGTGK+KT+ LL +L+ R LVC P+ AI EL
Sbjct: 1980 AKICLIHGPPGTGKSKTIVGLLSRVLRENTRNEKTSKKNAKIKQNRFLVCAPSNAAIDEL 2039
Query: 272 ASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRVK 323
+++ KE + R G+I L+ ++S V LD +V+
Sbjct: 2040 MKKIIIAFKEKCQN--RQEPLGNCGDIKLVRLGAERSINSEVRAFSLDKQVE 2089
Score = 54 (24.1 bits), Expect = 5.8e-32, Sum P(3) = 5.8e-32
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 17 AVPYDYG-FTDTVFSWSLEDIFNE-------DLFKDKVKRIPFSFRSVGQYFESFVFPLL 68
A +D+ F V W+ E N L + V +P F+ YF +F FPL+
Sbjct: 1717 AQQHDHNIFVKEVLKWTYEMFANSIQFGPPSTLVQSVVASVPIRFQGYNDYFNTF-FPLM 1775
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 369 (135.0 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 112/331 (33%), Positives = 168/331 (50%)
Query: 525 LRKLLSSFNELN-LPSAVEKDL--LEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF 581
L+KL +E L SA EK L+ +R L A + T + M+
Sbjct: 573 LQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQ-FRS 631
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXX 641
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFE
Sbjct: 632 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 690
Query: 642 XXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF-LPGPMYGPYSFINV 700
+QYRMHP++S FP++ FYE + + T R +K F P F V
Sbjct: 691 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPMFFYV 749
Query: 701 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKL 758
G+EE S N E + V KI L K + IGI++PY Q + + + +
Sbjct: 750 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYM 806
Query: 759 ---GSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
GS + V++ SVD FQG E+D II+S VR+N IGF+++PRR+NVALTRA
Sbjct: 807 QFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRA 865
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
R+ + I+GN + L++ + +W L++ K ++
Sbjct: 866 RYGVIIVGNPKALSK-QPLWNHLLNYYKEQK 895
Score = 92 (37.4 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPTIVAIKELASRVVKLVKESVERDC 287
+ LI GPPGTGKT T + ++ L Q LVC P+ +A+ +L ++ + + V R C
Sbjct: 486 LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVV-RLC 544
Query: 288 ---RDALFFPLGEILLLGNNERLKVDS 311
R+A+ P+ + L +N+ +DS
Sbjct: 545 AKSREAIDSPVSFLAL--HNQIRNMDS 569
Score = 40 (19.1 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1358 LKEESYKGDEF 1368
L ++SY GDEF
Sbjct: 1076 LSQDSYLGDEF 1086
Score = 40 (19.1 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1569 KFFSASPLKNQWRVVYEYMKEQDLLDSTSPGS 1600
K PL N + ++ K + L+++ +PG+
Sbjct: 895 KVLVEGPLNNLRESLMQFSKPRKLVNTINPGA 926
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 369 (135.0 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 112/331 (33%), Positives = 168/331 (50%)
Query: 525 LRKLLSSFNELN-LPSAVEKDL--LEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF 581
L+KL +E L SA EK L+ +R L A + T + M+
Sbjct: 583 LQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQ-FRS 641
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXX 641
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFE
Sbjct: 642 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 700
Query: 642 XXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF-LPGPMYGPYSFINV 700
+QYRMHP++S FP++ FYE + + T R +K F P F V
Sbjct: 701 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPMFFYV 759
Query: 701 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKL 758
G+EE S N E + V KI L K + IGI++PY Q + + + +
Sbjct: 760 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYM 816
Query: 759 ---GSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
GS + V++ SVD FQG E+D II+S VR+N IGF+++PRR+NVALTRA
Sbjct: 817 QFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRA 875
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
R+ + I+GN + L++ + +W L++ K ++
Sbjct: 876 RYGVIIVGNPKALSK-QPLWNHLLNYYKEQK 905
Score = 92 (37.4 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPTIVAIKELASRVVKLVKESVERDC 287
+ LI GPPGTGKT T + ++ L Q LVC P+ +A+ +L ++ + + V R C
Sbjct: 496 LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVV-RLC 554
Query: 288 ---RDALFFPLGEILLLGNNERLKVDS 311
R+A+ P+ + L +N+ +DS
Sbjct: 555 AKSREAIDSPVSFLAL--HNQIRNMDS 579
Score = 40 (19.1 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1358 LKEESYKGDEF 1368
L ++SY GDEF
Sbjct: 1086 LSQDSYLGDEF 1096
Score = 40 (19.1 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1569 KFFSASPLKNQWRVVYEYMKEQDLLDSTSPGS 1600
K PL N + ++ K + L+++ +PG+
Sbjct: 905 KVLVEGPLNNLRESLMQFSKPRKLVNTINPGA 936
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 369 (135.0 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 112/331 (33%), Positives = 168/331 (50%)
Query: 525 LRKLLSSFNELN-LPSAVEKDL--LEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF 581
L+KL +E L SA EK L+ +R L A + T + M+
Sbjct: 584 LQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQ-FRS 642
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXX 641
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFE
Sbjct: 643 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 701
Query: 642 XXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF-LPGPMYGPYSFINV 700
+QYRMHP++S FP++ FYE + + T R +K F P F V
Sbjct: 702 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPMFFYV 760
Query: 701 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKL 758
G+EE S N E + V KI L K + IGI++PY Q + + + +
Sbjct: 761 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYM 817
Query: 759 ---GSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
GS + V++ SVD FQG E+D II+S VR+N IGF+++PRR+NVALTRA
Sbjct: 818 QFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRA 876
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
R+ + I+GN + L++ + +W L++ K ++
Sbjct: 877 RYGVIIVGNPKALSK-QPLWNHLLNYYKEQK 906
Score = 92 (37.4 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPTIVAIKELASRVVKLVKESVERDC 287
+ LI GPPGTGKT T + ++ L Q LVC P+ +A+ +L ++ + + V R C
Sbjct: 497 LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVV-RLC 555
Query: 288 ---RDALFFPLGEILLLGNNERLKVDS 311
R+A+ P+ + L +N+ +DS
Sbjct: 556 AKSREAIDSPVSFLAL--HNQIRNMDS 580
Score = 40 (19.1 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1358 LKEESYKGDEF 1368
L ++SY GDEF
Sbjct: 1087 LSQDSYLGDEF 1097
Score = 40 (19.1 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1569 KFFSASPLKNQWRVVYEYMKEQDLLDSTSPGS 1600
K PL N + ++ K + L+++ +PG+
Sbjct: 906 KVLVEGPLNNLRESLMQFSKPRKLVNTINPGA 937
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 369 (135.0 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 112/331 (33%), Positives = 168/331 (50%)
Query: 525 LRKLLSSFNELN-LPSAVEKDL--LEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF 581
L+KL +E L SA EK L+ +R L A + T + M+
Sbjct: 585 LQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQ-FRS 643
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXX 641
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFE
Sbjct: 644 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 702
Query: 642 XXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF-LPGPMYGPYSFINV 700
+QYRMHP++S FP++ FYE + + T R +K F P F V
Sbjct: 703 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPMFFYV 761
Query: 701 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKL 758
G+EE S N E + V KI L K + IGI++PY Q + + + +
Sbjct: 762 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYM 818
Query: 759 ---GSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
GS + V++ SVD FQG E+D II+S VR+N IGF+++PRR+NVALTRA
Sbjct: 819 QFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRA 877
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
R+ + I+GN + L++ + +W L++ K ++
Sbjct: 878 RYGVIIVGNPKALSK-QPLWNHLLNYYKEQK 907
Score = 92 (37.4 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPTIVAIKELASRVVKLVKESVERDC 287
+ LI GPPGTGKT T + ++ L Q LVC P+ +A+ +L ++ + + V R C
Sbjct: 498 LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVV-RLC 556
Query: 288 ---RDALFFPLGEILLLGNNERLKVDS 311
R+A+ P+ + L +N+ +DS
Sbjct: 557 AKSREAIDSPVSFLAL--HNQIRNMDS 581
Score = 40 (19.1 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1358 LKEESYKGDEF 1368
L ++SY GDEF
Sbjct: 1088 LSQDSYLGDEF 1098
Score = 40 (19.1 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1569 KFFSASPLKNQWRVVYEYMKEQDLLDSTSPGS 1600
K PL N + ++ K + L+++ +PG+
Sbjct: 907 KVLVEGPLNNLRESLMQFSKPRKLVNTINPGA 938
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 369 (135.0 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 112/331 (33%), Positives = 168/331 (50%)
Query: 525 LRKLLSSFNELN-LPSAVEKDL--LEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF 581
L+KL +E L SA EK L+ +R L A + T + M+
Sbjct: 586 LQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQ-FRS 644
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXX 641
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFE
Sbjct: 645 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 703
Query: 642 XXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF-LPGPMYGPYSFINV 700
+QYRMHP++S FP++ FYE + + T R +K F P F V
Sbjct: 704 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPMFFYV 762
Query: 701 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKL 758
G+EE S N E + V KI L K + IGI++PY Q + + + +
Sbjct: 763 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYM 819
Query: 759 ---GSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
GS + V++ SVD FQG E+D II+S VR+N IGF+++PRR+NVALTRA
Sbjct: 820 QFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRA 878
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
R+ + I+GN + L++ + +W L++ K ++
Sbjct: 879 RYGVIIVGNPKALSK-QPLWNHLLNYYKEQK 908
Score = 92 (37.4 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPTIVAIKELASRVVKLVKESVERDC 287
+ LI GPPGTGKT T + ++ L Q LVC P+ +A+ +L ++ + + V R C
Sbjct: 499 LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVV-RLC 557
Query: 288 ---RDALFFPLGEILLLGNNERLKVDS 311
R+A+ P+ + L +N+ +DS
Sbjct: 558 AKSREAIDSPVSFLAL--HNQIRNMDS 582
Score = 40 (19.1 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1358 LKEESYKGDEF 1368
L ++SY GDEF
Sbjct: 1089 LSQDSYLGDEF 1099
Score = 40 (19.1 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1569 KFFSASPLKNQWRVVYEYMKEQDLLDSTSPGS 1600
K PL N + ++ K + L+++ +PG+
Sbjct: 908 KVLVEGPLNNLRESLMQFSKPRKLVNTINPGA 939
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 368 (134.6 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 112/331 (33%), Positives = 167/331 (50%)
Query: 525 LRKLLSSFNELN-LPSAVEKDL--LEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF 581
L+KL +E L SA EK L+ +R L A + T + M+
Sbjct: 580 LQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQ-FRS 638
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXX 641
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFE
Sbjct: 639 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 697
Query: 642 XXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF-LPGPMYGPYSFINV 700
+QYRMHP++S FP++ FYE + + T R +K F P F V
Sbjct: 698 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-VKKGFDFQWPQPDKPMFFYV 756
Query: 701 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKL 758
G+EE S N E + V KI L K + IGI++PY Q + + + +
Sbjct: 757 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYM 813
Query: 759 ---GSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
GS + V++ SVD FQG E+D II+S VR+N IGF+++PRR+NVALTRA
Sbjct: 814 QFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRA 872
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
R+ + I+GN + L++ + +W L+ K ++
Sbjct: 873 RYGVIIVGNPKALSK-QPLWNHLLSYYKEQK 902
Score = 92 (37.4 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPTIVAIKELASRVVKLVKESVERDC 287
+ LI GPPGTGKT T + ++ L Q LVC P+ +A+ +L ++ + + V R C
Sbjct: 493 LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVV-RLC 551
Query: 288 ---RDALFFPLGEILLLGNNERLKVDS 311
R+A+ P+ + L +N+ +DS
Sbjct: 552 AKSREAIDSPVSFLAL--HNQIRNMDS 576
Score = 40 (19.1 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1358 LKEESYKGDEF 1368
L ++SY GDEF
Sbjct: 1083 LSQDSYLGDEF 1093
Score = 40 (19.1 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 1575 PLKNQWRVVYEYMKEQDLLDSTSPGS 1600
PL N + ++ K + L+++ +PG+
Sbjct: 908 PLNNLRESLMQFSKPRKLVNTVNPGA 933
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 367 (134.2 bits), Expect = 2.0e-31, Sum P(3) = 2.0e-31
Identities = 97/271 (35%), Positives = 146/271 (53%)
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXX 641
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFE
Sbjct: 613 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 671
Query: 642 XXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF-LPGPMYGPYSFINV 700
+QYRMHP++S FP++ FYE + + T R +K F P F V
Sbjct: 672 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR-LKKGFDFQWPQPDKPMFFYV 730
Query: 701 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKL 758
G+EE S N E + V KI L K + IGI++PY Q + + + +
Sbjct: 731 TQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYM 787
Query: 759 ---GSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
GS + V++ SVD FQG E+D II+S VR+N IGF+++PRR+NVALTRA
Sbjct: 788 QFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRA 846
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
R+ + I+GN + L++ + +W L++ K ++
Sbjct: 847 RYGVIIVGNPKALSK-QPLWNHLLNYYKEQK 876
Score = 92 (37.4 bits), Expect = 2.0e-31, Sum P(3) = 2.0e-31
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPTIVAIKELASRVVKLVKESVERDC 287
+ LI GPPGTGKT T + ++ L Q LVC P+ +A+ +L ++ + + V R C
Sbjct: 467 LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVV-RLC 525
Query: 288 ---RDALFFPLGEILLLGNNERLKVDS 311
R+A+ P+ + L +N+ +DS
Sbjct: 526 AKSREAIDSPVSFLAL--HNQIRNMDS 550
Score = 40 (19.1 bits), Expect = 2.0e-31, Sum P(3) = 2.0e-31
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1358 LKEESYKGDEF 1368
L ++SY GDEF
Sbjct: 1059 LSQDSYLGDEF 1069
Score = 40 (19.1 bits), Expect = 2.0e-31, Sum P(3) = 2.0e-31
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1569 KFFSASPLKNQWRVVYEYMKEQDLLDSTSPGS 1600
K PL N + ++ K + L+++ +PG+
Sbjct: 876 KVLVEGPLNNLRESLMQFSKPRKLVNTINPGA 907
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 342 (125.4 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 89/272 (32%), Positives = 145/272 (53%)
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXX 641
++IDE+ Q E E + + + G++ VL GD CQL +V K + A +SLFE
Sbjct: 607 VLIDESTQATEPEILVSI-MRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLL 665
Query: 642 XXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVF 701
+QYRMHP +S FP++ FY+ + + T R P +F
Sbjct: 666 GIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKPAFFWHC 725
Query: 702 GGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLG 759
G EE S N E + V K++ L K + + IG+++ Y Q + I +
Sbjct: 726 SGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQPHQ---IGVITSYEGQRSFIVNYMH 782
Query: 760 SK-YVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARH 817
++ +NS + V++ SVD FQG E+D II++ VRSN+ IGF+S+PRR+NVA+TRA++
Sbjct: 783 TQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKY 842
Query: 818 CLWILGNERTLTRNRSVWKALVDDAKARQCFF 849
L ++GN + L R+ +W L++ K+++ +
Sbjct: 843 GLVLVGNAKVLARH-DLWHELINHYKSKEMLY 873
Score = 97 (39.2 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPTIVAIKELASRVVKLVKESVERDC 287
+ LI GPPGTGKT + ++ L+Q + LVC+P+ +A+ LA ++ K + V R C
Sbjct: 462 LSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVV-RLC 520
Query: 288 RDALFFPLGEILLLGNNERLKVDSGVE 314
+ + L +LKV G E
Sbjct: 521 ARSREHSETTVPYLTLQHQLKVMGGAE 547
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 367 (134.2 bits), Expect = 8.2e-30, Sum P(4) = 8.2e-30
Identities = 105/318 (33%), Positives = 159/318 (50%)
Query: 550 LKRFCLKRASLFFSTAS-SSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 608
++ L A + +T S S L + + ++IDEAAQ E+ + IP+Q G K V
Sbjct: 555 IRTLVLDEADIVATTLSFSGASLLTKMAGGFDIVIIDEAAQAVETSTLIPIQ-HGCKKVV 613
Query: 609 LFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYE 668
L GD QLPA + S ++ + + +SLF+ QYRMH I FP+ +FY+
Sbjct: 614 LVGDPKQLPATIISPLAIKYKYDQSLFQRLQEKNSPHMLTT-QYRMHSLIRAFPSRHFYQ 672
Query: 669 NKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVF-------GGREEFIEHSCRNMVEVSVV 721
+ + D P + R+ + P +GP F ++ GG F EH C+ + +
Sbjct: 673 DLLLDGPNIPSRA--THYHSNPFFGPLVFYDLSWSTETKPGGGSVFNEHECKMAM---YL 727
Query: 722 MKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGG 781
++ +Y + IGI+SPY QV A++E + N G ++ +VDGFQG
Sbjct: 728 FQLFTKVYP---DEDFASRIGIISPYRQQVLALREI----FKNYPGISID--TVDGFQGR 778
Query: 782 EEDIIIISTVRS--NNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALV 839
E +III S VR+ G IGF+S+ RR+NVALTR R L ILGN + L+ N+ W L+
Sbjct: 779 EREIIIFSCVRAPVEEGAGIGFLSDVRRMNVALTRPRSSLLILGNTKALSINKD-WNELI 837
Query: 840 DDAKARQCFFNADDDKDL 857
+ Q D+ L
Sbjct: 838 QHTQNNQQLIPVTKDQPL 855
Score = 71 (30.1 bits), Expect = 8.2e-30, Sum P(4) = 8.2e-30
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 226 GATVQLIWGPPGTGKTKTVSMLLVILL 252
G + LI GPPGTGKT + L+ +LL
Sbjct: 349 GNAITLIQGPPGTGKTHVILGLISVLL 375
Score = 52 (23.4 bits), Expect = 8.2e-30, Sum P(4) = 8.2e-30
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 255 KFRTLVCTPTIVAIKELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVE 314
K R L+C P+ A+ E+ SR+++ + D R + P ++ +G S VE
Sbjct: 461 KRRILLCAPSNGAVDEIVSRLIR--DGLLNADGRK--YNP--NLVRVGPGSH----SDVE 510
Query: 315 EIYLDYRVK 323
+ LDY V+
Sbjct: 511 SVSLDYMVR 519
Score = 38 (18.4 bits), Expect = 8.2e-30, Sum P(4) = 8.2e-30
Identities = 14/58 (24%), Positives = 25/58 (43%)
Query: 66 PLLEETRA-NLMSGMEKISNAPFA---QVVAFE-DSKPYGSMLYDVKVDCWRNRFSNL 118
P+ E+ R +L+ +E + N V + D S+L ++D W + NL
Sbjct: 229 PITEQNRTLHLIGTVEHLDNGGIKVKFYVKGIKGDRARQVSLLLRYEIDWWTTKLCNL 286
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 328 (120.5 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 96/288 (33%), Positives = 146/288 (50%)
Query: 578 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLF-- 635
P + +++DEA Q E E+ PL + VL GD QLP V S + + + +S+
Sbjct: 2164 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 2222
Query: 636 ---------EXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF 686
E IQYRMHP I FP+SY Y+ + + E +
Sbjct: 2223 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILRTNRGTETSRCSSDW 2282
Query: 687 LPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSP 746
P + PY +V G E S N+ E+ +VM+ L+ L K +IGI++
Sbjct: 2283 ---P-FQPYLVFDVGDGLERRDNDSYVNVQEIKLVME-LIKLIKDKRRDVTFRNIGIITH 2337
Query: 747 YIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSN-NGGSIGFISNP 805
Y AQ IQ+ L ++ + G A +V +VD FQG ++D +I++ VR+N GSIGF+++
Sbjct: 2338 YKAQKTMIQKDLDKEF-DRKG-AAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASL 2395
Query: 806 RRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADD 853
+R+NV +TRA++ L+ILG+ RTL NR W L+ DA+ R D
Sbjct: 2396 QRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKRGAIIKTCD 2442
Score = 90 (36.7 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 48/175 (27%), Positives = 76/175 (43%)
Query: 225 SGATVQLIWGPPGTGKTKTVSMLLVILL-------------QMKF---RTLVCTPTIVAI 268
S A + LI GPPGTGK+KT+ +L LL K R LVC P+ A+
Sbjct: 1944 SVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSDENSNAKIKQNRVLVCAPSNAAV 2003
Query: 269 KELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRVKRLADC 328
EL +++ KE +D ++ + G+I L+ +++ V + LD +V
Sbjct: 2004 DELMKKIILEFKEKC-KDKKNPMG-NCGDINLVRLGPEKSINNEVLKFSLDSQVNHRMKK 2061
Query: 329 FAPLTGWSHC--FASMVEFLDNCV---SQYHTYMENESMKQSEDINGDIIK-EKE 377
P SH EFLD+ + S+ Q ++++G I + KE
Sbjct: 2062 DLP----SHVQEMHKRKEFLDHQLDELSRQRALCRGGRESQRQELDGKIARVSKE 2112
Score = 59 (25.8 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 24 FTDTVFSWSLEDIFNED-------LFKDKVKRIPFSFRSVGQYFESFVFPLL 68
F V W E N D L + +R+P F+ G YF F FPL+
Sbjct: 1691 FVKEVLKWRYEMFVNFDQCGPPSSLCQSIERRVPIRFQDCGDYFNVF-FPLM 1741
Score = 40 (19.1 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 186 SKKSLFVIFLINRTSNRRIWNSLHMKGNLKIIKELLCTDSGATV 229
SK + +++ + + RR ++ + +K + L+C S A V
Sbjct: 1960 SKTIVGILYRLLTENQRRGYSDENSNAKIKQNRVLVCAPSNAAV 2003
Score = 40 (19.1 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 20/108 (18%), Positives = 49/108 (45%)
Query: 382 ADASDVEIKPFLEFVRERFKCIINGDIIKEKECGKE---ADASDVEIKPFLEFVRERFKC 438
+D+++ + V++ +C ++E CG+ +D+ D E + + ++++ +
Sbjct: 974 SDSTEKSLSQIQRKVKDEKRCFTANQNVRETCCGQVIIISDSDDDEDEERILGLKKQMR- 1032
Query: 439 IAAPLRSCIFNFCTHIPKCYIGEDNFHV-MATLISLLDSFETLLFEDN 485
+++CI C P+ + N +V LI + L FE++
Sbjct: 1033 ---EVKACIEKEC---PEQHTSIANTNVEQKVLIKEENPVSLLEFEES 1074
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 323 (118.8 bits), Expect = 2.4e-27, Sum P(3) = 2.4e-27
Identities = 93/288 (32%), Positives = 145/288 (50%)
Query: 578 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLF-- 635
P + +++DEA Q E E+ PL + VL GD QLP V S + + + +S+
Sbjct: 2168 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISMKAQDYGYDQSMMAR 2226
Query: 636 ---------EXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF 686
E +QYRMHP I FP++Y Y + + E +
Sbjct: 2227 FYKLLEENVEHNVIGRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNSLTEASRCSSDW 2286
Query: 687 LPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSP 746
P + PY +V G E S N+ E+ +VM+I+ L K +IGI++
Sbjct: 2287 ---P-FQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITH 2341
Query: 747 YIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNG-GSIGFISNP 805
Y AQ IQ+ L ++ + G A +V +VDGFQG ++D +I++ VR+ GSIGF+++
Sbjct: 2342 YKAQKTLIQKDLDKEF-DRKGPA-EVDTVDGFQGRQKDCVIVTCVRAKTSQGSIGFLASL 2399
Query: 806 RRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADD 853
+R+NV +TRA++ L+ILG+ RTL N W L++DA+ R D
Sbjct: 2400 QRLNVTITRAKYSLFILGHLRTLRENDH-WNQLIEDAQKRGAIIKTCD 2446
Score = 94 (38.1 bits), Expect = 2.4e-27, Sum P(3) = 2.4e-27
Identities = 38/114 (33%), Positives = 54/114 (47%)
Query: 225 SGATVQLIWGPPGTGKTKTVSMLLVILL-------------QMKF---RTLVCTPTIVAI 268
S A + LI GPPGTGK+KT+ LL LL K R LVC P+ A+
Sbjct: 1948 SVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAV 2007
Query: 269 KELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRV 322
EL +++ KE +D R+ L G+I L+ +++ V LD +V
Sbjct: 2008 DELMKKIILEFKEKC-KDKRNPLG-NCGDINLVRLGPEKSINNEVLRFSLDSQV 2059
Score = 59 (25.8 bits), Expect = 2.4e-27, Sum P(3) = 2.4e-27
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 24 FTDTVFSWSLEDIFNED-------LFKDKVKRIPFSFRSVGQYFESFVFPLL 68
F V W E N D L + +R+P F+ G YF F FPL+
Sbjct: 1696 FVKEVLKWKYEMFVNFDQCGPPSGLCQAIARRVPVRFQDCGDYFSVF-FPLM 1746
Score = 37 (18.1 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 188 KSLFVIFLINR--TSNRRIWNSLHMKGNLKIIKE--LLCTDSGATV 229
KS ++ L+ R T N+R +S N KI + L+C S A V
Sbjct: 1963 KSKTIVGLLYRLLTENQRRGHS-DENSNAKIKQNRVLVCAPSNAAV 2007
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 326 (119.8 bits), Expect = 6.7e-27, Sum P(3) = 6.7e-27
Identities = 94/288 (32%), Positives = 146/288 (50%)
Query: 578 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLF-- 635
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+
Sbjct: 2197 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2255
Query: 636 ---------EXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF 686
E +QYRMHP I FP++Y Y + + E +
Sbjct: 2256 FYKLLEDNVEHNMIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNRCSSDW 2315
Query: 687 LPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSP 746
P + PY +V G E S N+ E+ +VM+I+ L K +IGI++
Sbjct: 2316 ---P-FQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITH 2370
Query: 747 YIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNN-GGSIGFISNP 805
Y AQ IQ+ L ++ + G A +V +VDGFQG ++D +I++ VR+N GSIGF+++
Sbjct: 2371 YKAQKTMIQKDLDKEF-DRKGPA-EVDTVDGFQGRQKDCVIVTCVRANAMQGSIGFLASL 2428
Query: 806 RRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADD 853
+R+NV +TRA++ L+ILG+ RTL N+ W L+ DA+ R D
Sbjct: 2429 QRLNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKRGAIIKTCD 2475
Score = 94 (38.1 bits), Expect = 6.7e-27, Sum P(3) = 6.7e-27
Identities = 38/114 (33%), Positives = 56/114 (49%)
Query: 225 SGATVQLIWGPPGTGKTKTVSMLLVILL---QMKF-------------RTLVCTPTIVAI 268
S A + LI GPPGTGK+KT+ LL LL Q K R LVC P+ A+
Sbjct: 1977 SVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAV 2036
Query: 269 KELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRV 322
EL +++ KE +D ++ L G+I L+ +++ V + LD +V
Sbjct: 2037 DELMKKIILEFKEKC-KDKKNPLG-NCGDINLVRLGPEKSINNEVLKFSLDSQV 2088
Score = 51 (23.0 bits), Expect = 6.7e-27, Sum P(3) = 6.7e-27
Identities = 15/52 (28%), Positives = 21/52 (40%)
Query: 24 FTDTVFSWSLEDIFNED-------LFKDKVKRIPFSFRSVGQYFESFVFPLL 68
F + W E N D L + + +P F+ G YF F FPL+
Sbjct: 1724 FVKEILKWKYEMFVNFDQCGPPASLCQSISRPVPVRFQDCGDYFNVF-FPLM 1774
Score = 47 (21.6 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 524 VLRKLLSSFNELNLPSAVEKDL-LEDLLKRFCLKRASLFFSTASSSYMLHSVAMKP 578
+L K ++ E N + + KDL LEDL C+K++S T + + KP
Sbjct: 668 ILIKASNTIEEDNEQNYI-KDLKLEDLSAESCIKQSSKSLFTERAQDQVKISTEKP 722
Score = 37 (18.1 bits), Expect = 1.9e-25, Sum P(3) = 1.9e-25
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 154 VSVANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLF 191
+ +N E++NE + + + E I S KSLF
Sbjct: 670 IKASNTIEEDNEQNYIKDLKLEDLSAESCIKQSSKSLF 707
Score = 37 (18.1 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 356 YMENESMKQSEDINGDIIKEKECGKEADASDVEIKPFLEF 395
Y++ + S ++ ++KE+E + + SD + F EF
Sbjct: 1062 YLKQHTSIASTNVEKKLMKEEETLLQFEESDSQ---FFEF 1098
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 323 (118.8 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 93/288 (32%), Positives = 146/288 (50%)
Query: 578 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLF-- 635
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 636 ---------EXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF 686
E +QYRMHP I FP++Y Y + + E +
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSDW 2292
Query: 687 LPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSP 746
P + PY +V G E S N+ E+ +VM+I+ L K +IGI++
Sbjct: 2293 ---P-FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGIITH 2347
Query: 747 YIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNN-GGSIGFISNP 805
Y AQ IQ+ L ++ + G A +V +VD FQG ++D +I++ VR+N+ GSIGF+++
Sbjct: 2348 YKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASL 2405
Query: 806 RRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADD 853
+R+NV +TRA++ L+ILG+ RTL N+ W L+ DA+ R D
Sbjct: 2406 QRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTCD 2452
Score = 97 (39.2 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 39/114 (34%), Positives = 56/114 (49%)
Query: 225 SGATVQLIWGPPGTGKTKTVSMLLVILL---QMKF-------------RTLVCTPTIVAI 268
S A + LI GPPGTGK+KT+ LL LL Q K R LVC P+ A+
Sbjct: 1954 SVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAV 2013
Query: 269 KELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRV 322
EL +++ KE +D ++ L G+I L+ ++S V + LD +V
Sbjct: 2014 DELMKKIILEFKEKC-KDKKNPLG-NCGDINLVRLGPEKSINSEVLKFSLDSQV 2065
Score = 50 (22.7 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 29/122 (23%), Positives = 49/122 (40%)
Query: 28 VFSWSLEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVFPLL---EETRANLMSGMEKISN 84
+FS+ + ++ D + IPF+ + +S F L E+R MS +
Sbjct: 876 IFSFHENNCKIQEFHVDGKELIPFTEMTNASEKKSSPFKDLMTVPESRDEEMSNSTSVIY 935
Query: 85 APFAQVVAFEDSKPYGSMLYDVKVDCWRNRFSNLGREPYKTLPGDILVLADAKPETASDL 144
+ + A D P L D ++D ++ S L + T P D P+ +S L
Sbjct: 936 SNLTREQA-PDISPKSDTLTDSQIDRDLHKLSLLAQASVITFPSD-------SPQNSSQL 987
Query: 145 QR 146
QR
Sbjct: 988 QR 989
Score = 49 (22.3 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 15/52 (28%), Positives = 20/52 (38%)
Query: 24 FTDTVFSWSLEDIFN-------EDLFKDKVKRIPFSFRSVGQYFESFVFPLL 68
F V W E N L + + +P F + G YF F FPL+
Sbjct: 1701 FVKEVLKWKYEMFLNFGQCGPPASLCQSISRPVPVRFHNYGDYFNVF-FPLM 1751
Score = 47 (21.6 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 71 TRANLMSGMEKISNAPFAQVVAFEDSKPYGS--MLYDVKVD--CWRNRFSNLGREPYKTL 126
T + + + K+S A V+ F P S + VK D C+ +N+G T
Sbjct: 954 TDSQIDRDLHKLSLLAQASVITFPSDSPQNSSQLQRKVKEDKRCFTANQNNVG----DTS 1009
Query: 127 PGDILVLADA 136
G +++++D+
Sbjct: 1010 RGQVIIISDS 1019
Score = 41 (19.5 bits), Expect = 8.9e-26, Sum P(3) = 8.9e-26
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 153 FVSVANVTED-ENEIDTSPTYFKVNATKEIQIDVSKKS 189
F + V E + E+ S + N T+E D+S KS
Sbjct: 913 FKDLMTVPESRDEEMSNSTSVIYSNLTREQAPDISPKS 950
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 317 (116.6 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 94/288 (32%), Positives = 145/288 (50%)
Query: 578 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLF-- 635
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+
Sbjct: 2150 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2208
Query: 636 ---------EXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF 686
E IQYRMHP I FP++Y Y + + E +
Sbjct: 2209 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTESIRCSSEW 2268
Query: 687 LPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSP 746
P + PY +V G E S N+ E+ +VM+I+ L K +IGI++
Sbjct: 2269 ---P-FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITH 2323
Query: 747 YIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNN-GGSIGFISNP 805
Y AQ IQ+ L ++ + G A +V +VD FQG ++D II++ VR++ GSIGF+++
Sbjct: 2324 YKAQKTMIQKDLEKEF-DKKGPA-EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASL 2381
Query: 806 RRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADD 853
+R+NV +TRA++ L+ILG+ RTL N+ W L+ DA+ R D
Sbjct: 2382 QRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTSD 2428
Score = 96 (38.9 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 39/114 (34%), Positives = 57/114 (50%)
Query: 225 SGATVQLIWGPPGTGKTKTVSMLLVILL---QMK------F-------RTLVCTPTIVAI 268
S A + LI GPPGTGK+KT+ LL LL Q K F R LVC P+ A+
Sbjct: 1930 SVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAV 1989
Query: 269 KELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRV 322
EL +++ KE +D ++ L G+I L+ +++ V + LD +V
Sbjct: 1990 DELMKKIILEFKEKC-KDKKNPLG-NCGDINLVRLGPEKSINTEVLKFSLDSQV 2041
Score = 46 (21.3 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 10 SRSKKKRAVPYDYGFTDTV 28
SRS KKR +DY TDTV
Sbjct: 1344 SRSHKKR--DFDYKNTDTV 1360
Score = 41 (19.5 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 548 DLLKRFCLKRASLFFSTASSS--YMLHSVA 575
D+LKR+ S F TA Y L VA
Sbjct: 16 DVLKRYASSTGSSEFQTADEDLCYCLECVA 45
Score = 40 (19.1 bits), Expect = 5.8e-25, Sum P(3) = 5.8e-25
Identities = 13/52 (25%), Positives = 21/52 (40%)
Query: 24 FTDTVFSWSLEDIFNED-------LFKDKVKRIPFSFRSVGQYFESFVFPLL 68
F V W + N D L + + +P F+ +YF F+ PL+
Sbjct: 1682 FIKEVLKWKYQMFLNFDKCGAPTSLCQSISRPVPVRFQDCAEYFNVFL-PLI 1732
Score = 37 (18.1 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 88 AQVVAFEDSKPYGSMLYDVKVD 109
+QV FE S S+ D K+D
Sbjct: 1065 SQVFEFESSSEVFSVWQDHKID 1086
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 316 (116.3 bits), Expect = 7.4e-25, Sum P(3) = 7.4e-25
Identities = 95/288 (32%), Positives = 146/288 (50%)
Query: 578 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLF-- 635
P + +++DEA Q E E+ PL + VL GD QLP V S + E + +S+
Sbjct: 2151 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 2209
Query: 636 ---------EXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF 686
E IQYRMHP I FP++Y Y + + E +
Sbjct: 2210 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTETIRCSSEW 2269
Query: 687 LPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSP 746
P + PY +V G E+ S N+ E+ +VM+I+ L K +IGI++
Sbjct: 2270 ---P-FQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITH 2324
Query: 747 YIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNN-GGSIGFISNP 805
Y AQ IQ+ L ++ + G A +V +VD FQG ++D II++ VR++ GSIGF+++
Sbjct: 2325 YKAQKTMIQKDLEKEF-DKKGPA-EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASL 2382
Query: 806 RRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADD 853
+R+NV +TRA++ L+ILG+ RTL N+ W L+ DA+ R D
Sbjct: 2383 QRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTCD 2429
Score = 96 (38.9 bits), Expect = 7.4e-25, Sum P(3) = 7.4e-25
Identities = 39/114 (34%), Positives = 57/114 (50%)
Query: 225 SGATVQLIWGPPGTGKTKTVSMLLVILL---QMK------F-------RTLVCTPTIVAI 268
S A + LI GPPGTGK+KT+ LL LL Q K F R LVC P+ A+
Sbjct: 1931 SVAKICLIHGPPGTGKSKTIVGLLYRLLTESQRKGHSDENFNAKIKQNRVLVCAPSNAAV 1990
Query: 269 KELASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRV 322
EL +++ KE +D ++ L G+I L+ +++ V + LD +V
Sbjct: 1991 DELMKKIILEFKEKC-KDKKNPLG-NCGDINLVRLGPEKSINTEVLKFSLDSQV 2042
Score = 42 (19.8 bits), Expect = 5.5e-19, Sum P(3) = 5.5e-19
Identities = 17/77 (22%), Positives = 32/77 (41%)
Query: 340 ASMVEFLDNCVSQYHTYMENESMKQSEDINGDIIKEKECGKEADASDVEIKPFLEFVRER 399
+S+ E +C++ N ++ ++ ++++ KE G + A +P E
Sbjct: 1088 SSLQEDQKSCIAHVADSTNNNLGCGADSVSEEVVRNKEKGVKEHA-----EPHSSVSAEG 1142
Query: 400 FKCIINGDIIKEKECGK 416
F C I K K C K
Sbjct: 1143 F-CKIGVRKPKRKRCDK 1158
Score = 42 (19.8 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 347 DNCVSQYHTYMENESMKQSEDINGDIIKEKECGKEADASDVEIKPFLEFVRERFKCIING 406
DN H + + Q E+ I+ K+ + D+ L ++ ++K +
Sbjct: 1480 DNLFLTQHDPQDMDLCSQLENSKAIIVAHKDTVQREDSLSRPQLESLSIIKCKYKDCVET 1539
Query: 407 DIIKEKECGK--EADASDVEI--KPFL 429
+ + C K EA A+D ++ KP L
Sbjct: 1540 TKNQGEYCPKHSEAKAADDDVFRKPGL 1566
Score = 40 (19.1 bits), Expect = 7.4e-25, Sum P(3) = 7.4e-25
Identities = 13/52 (25%), Positives = 21/52 (40%)
Query: 24 FTDTVFSWSLEDIFNED-------LFKDKVKRIPFSFRSVGQYFESFVFPLL 68
F V W + N D L + + +P F+ +YF F+ PL+
Sbjct: 1683 FIKEVLKWKYQMFLNFDKCGAPTSLCQSISRPVPVRFQDCAEYFNVFL-PLI 1733
Score = 37 (18.1 bits), Expect = 7.3e-23, Sum P(4) = 7.3e-23
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 128 GDILVLADAKPETASD 143
G++ + A+PE++SD
Sbjct: 1460 GEVAAVRAAEPESSSD 1475
Score = 37 (18.1 bits), Expect = 7.3e-23, Sum P(4) = 7.3e-23
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 88 AQVVAFEDSKPYGSMLYDVKVD 109
+QV FE S S+ D K+D
Sbjct: 1064 SQVFEFESSSEVFSVWQDHKID 1085
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 316 (116.3 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 107/349 (30%), Positives = 174/349 (49%)
Query: 526 RKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVID 585
+KL N+L+ P +++ E + C+ RA++ +T SS L + + + ++D
Sbjct: 1336 KKLQLISNQLS-PPLTQREEFE--ISHMCVTRANIICTTLSSCVKLANY-VDFFDICIVD 1391
Query: 586 EAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXX 645
EA Q E + +P++ G+ H VL GD QLPA+V SK + + S+F+
Sbjct: 1392 EATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQ 1450
Query: 646 XXXXIQYR-MHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFL--------PGPMYGPYS 696
Y MH + Y +I P + YE + + P+ PY
Sbjct: 1451 LDKPGSYHLMHTKLFKLSTQYRMHPEICRWPN--QYFYEDQLINAECTARFASPLI-PYC 1507
Query: 697 FINV-FGGREEFIEH-SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAI 754
IN+ + ++ S N E V K+L + K + SK + S G++SPY Q A+
Sbjct: 1508 VINLKYTCDSNGAQNKSISNNEEARFVAKLLTEMDKH-MPSK-RFSYGLISPYQNQCYAL 1565
Query: 755 QEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTR 814
+ + S ++N + +VD +QG E+D+IIIS R+ GF++N +R+NVALTR
Sbjct: 1566 SQVIPS-HMN-----ITPQTVDSYQGLEKDVIIISNARTRG---CGFLTNYQRLNVALTR 1616
Query: 815 ARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNAD-DD-KDLGKSI 861
R CL I GN L ++ +W+ L+DDA+ R+ +FN D DD DL +S+
Sbjct: 1617 PRRCLVICGNFEDL-KSVEMWRNLLDDARKRKVYFNLDRDDVNDLDRSL 1664
Score = 64 (27.6 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 224 DSGATVQLIWGPPGTGKTKTVSMLLVILLQ------MKFRTLVCTPTIVAIKELASRVVK 277
D ++ LI GPPGTGK++ +S L + L + + L+C + A+ + +
Sbjct: 1190 DLQPSLTLIQGPPGTGKSRVISELCLQTLYGNAAKTLDRKILICAHSNTAVDHIVGLLGS 1249
Query: 278 LVKESVERDCRDALFFPLGE 297
+++ + RD L F + E
Sbjct: 1250 VLRV-MNRDQFHLLRFGMHE 1268
Score = 45 (20.9 bits), Expect = 7.8e-22, Sum P(2) = 7.8e-22
Identities = 55/235 (23%), Positives = 95/235 (40%)
Query: 21 DYGFTD-TVFSWSLEDIFNEDLFKDKVKRIPFSFRSVGQY--FESFVFPLLEETRANLMS 77
DY + FS SL ++ +D+ V R+ + + G++ + + +L+ET ANL+
Sbjct: 1028 DYKINNKNTFSVSLINVETQDMCYRLVTRV--NSKPFGKFVLYTLYCCGMLKETFANLLE 1085
Query: 78 GMEKISNAPF-------AQVVAFEDSKPYGSMLYDVKVDCWRNRFSNLGREPYKTLPGDI 130
++ +S F Q ++ E K + VD R L L
Sbjct: 1086 -LKFVSGNVFDLTFEILKQDISEEKLKNIKQLTARPVVDSLRVELGALSA--VHQLRSSP 1142
Query: 131 LVLADAKP-ETASDLQRVGRMWTFVSVANVTEDENEIDTSPTYFKVNATKEIQIDVSKKS 189
L KP +T +++ + +TF + E + I TY ++ ID + S
Sbjct: 1143 LCRRILKPTQTVNEVSLPKQPFTFKGCHKLNEHQENI-VLHTYQRI-------IDDLQPS 1194
Query: 190 LFVIFLINRTSNRRIWNSLHMK---GNL-KII--KELLCTDSGATVQLIWGPPGT 238
L +I T R+ + L ++ GN K + K L+C S V I G G+
Sbjct: 1195 LTLIQGPPGTGKSRVISELCLQTLYGNAAKTLDRKILICAHSNTAVDHIVGLLGS 1249
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 310 (114.2 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 97/331 (29%), Positives = 163/331 (49%)
Query: 520 ECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPL 579
E H ++R+ L+ + + ++E+ L R LK+A + T ++ M L
Sbjct: 564 ELHALMREELTPIERVYVRKSIEQHKLGT--NRVLLKQARVVGITCAACPF---PCMNDL 618
Query: 580 NF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSDEACFGRSLFE 636
F +V+DE +Q+ E S +P+ + +L GD QLP ++ S + ++LF+
Sbjct: 619 KFPVVVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHGNGLEQTLFD 678
Query: 637 XXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYS 696
QYR HP IS N FYE + + + +RS +LP
Sbjct: 679 RLCLMGHKPIQLRTQYRCHPVISAIANDLFYEGNLVNGISERERSPVLEWLP-----TLC 733
Query: 697 FINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQE 756
F NV G + E+S N+ E + +K++ +L + E IG+++ Y +Q+ I
Sbjct: 734 FYNVTGTEQVERENSFVNVAEAAFTLKLIRSLIASGL---EGSMIGVITLYKSQMYKICS 790
Query: 757 KLGSKYVNSAGF-AVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
L + V+ AV+V +VD FQG E++III+S VR+ +GFI + +R+NVALTR
Sbjct: 791 LLSAVDVDHPDVKAVEVSTVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRG 847
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
R L I+G+ L +N+ +W ++ K R+
Sbjct: 848 RRHLLIIGSLSCLRKNQ-LWGRVIQHCKGRE 877
Score = 55 (24.4 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 29 FSWSLEDIFNEDLFKDKVK-RIPFS-FRSVGQYFESFVFPLLEETRANLMSGME 80
F W LED+ E L +++ + + F+ +S+G Y S + EE + L G +
Sbjct: 202 FKW-LEDVTPEQLSQNESQPNMIFNDIKSIGSYLRSQKIAVYEECQLLLRKGFD 254
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 281 (104.0 bits), Expect = 6.4e-23, Sum P(3) = 6.4e-23
Identities = 86/259 (33%), Positives = 130/259 (50%)
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXX 641
++IDEA+Q E + IPL G+ +L GD QL V+SK + F R +
Sbjct: 386 VIIDEASQALEPQCWIPLL--GMNKVILAGDHMQLSPNVQSKRPYISMFERLV---KSQG 440
Query: 642 XXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSY-------EKRFLPGPMY-- 692
IQYRMH IS FP+ FY++K+ + V+KR E P+Y
Sbjct: 441 DLVKCFLNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLENVEETELTDSPIYFY 500
Query: 693 ---GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIA 749
G Y + + F + S N E +V + L + + +K+ I +V+PY A
Sbjct: 501 DTLGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAKD---IAVVTPYNA 557
Query: 750 QVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVN 809
QVA I++ L K G V++ SVD QG E++ II S VRSN+ +GF++ RR+N
Sbjct: 558 QVALIRQLLKEK-----GIEVEMGSVDKVQGREKEAIIFSLVRSNDVREVGFLAEKRRLN 612
Query: 810 VALTRARHCLWILGNERTL 828
VA+TR + L ++G+ T+
Sbjct: 613 VAITRPKRHLCVIGDSNTV 631
Score = 85 (35.0 bits), Expect = 6.4e-23, Sum P(3) = 6.4e-23
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 229 VQLIWGPPGTGKTKT-VSMLLVILLQMKFRTLVCTPTIVAIKELASRV 275
+ LI GPPGTGKT T V ++ ++L+ K R LVC + +A+ + R+
Sbjct: 227 LSLIHGPPGTGKTHTLVEIIQQLVLRNK-RILVCGASNLAVDNIVDRL 273
Score = 42 (19.8 bits), Expect = 6.4e-23, Sum P(3) = 6.4e-23
Identities = 26/96 (27%), Positives = 43/96 (44%)
Query: 115 FSNLGRE-PYKTL-PGDILVLADAKPETASDLQRVGRMWTFVSVANVTEDENEIDTSPTY 172
FSN G E P + PGD++ + + +S +R T +SV V +E +
Sbjct: 82 FSN-GEELPANSFSPGDVVSIR--QDFQSSKKKRPNE--TDISVEGVVTRVHE-----RH 131
Query: 173 FKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSL 208
V E I S L V+ L+NR + R+ +++
Sbjct: 132 ISVALKSEEDIPSSVTRLSVVKLVNRVTYERMRHTM 167
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 274 (101.5 bits), Expect = 7.2e-23, Sum P(2) = 7.2e-23
Identities = 96/325 (29%), Positives = 160/325 (49%)
Query: 525 LRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVI 584
+R+LL + L EK+ ++++L A + F+T + ++ + +VI
Sbjct: 615 IRQLLKQLGK-TLKKK-EKETVKEILSN-----AQVVFATNIGAADPLIRRLETFDLVVI 667
Query: 585 DEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXX 644
DEA Q E IP+ L G K +L GD CQL +V S+ + E G SL E
Sbjct: 668 DEAGQSIEPSCWIPI-LQG-KRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDG 725
Query: 645 XXXXXI--QYRMHPSISFFPNSYFYENKIHDSPTVEKRSY-EKRFLPG------PMY--- 692
+ QYRM+ I+ + + Y + +P+V + F+ P+
Sbjct: 726 VLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKATWITQCPLVLLD 785
Query: 693 --GPYSFINVFGGREEFIEH----SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSP 746
PY ++V G EE ++ S N E +V+ +++L ++ ++I + SP
Sbjct: 786 TRMPYGSLSV--GCEERLDPAGTGSLYNEGEADIVVNHVISLIYAGVSP---MAIAVQSP 840
Query: 747 YIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPR 806
Y+AQV ++E+L V V+V ++D FQG E D +IIS VRSNN G++GF+ + R
Sbjct: 841 YVAQVQLLRERLDDFPVADG---VEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSR 897
Query: 807 RVNVALTRARHCLWILGNERTLTRN 831
R+NVA+TRAR + ++ + T+ N
Sbjct: 898 RMNVAITRARKHVAVVCDSSTICHN 922
Score = 91 (37.1 bits), Expect = 7.2e-23, Sum P(2) = 7.2e-23
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKL 278
V ++ GPPGTGKT + ++ + +Q R LV PT A+ + +++ L
Sbjct: 505 VMIVQGPPGTGKTGMLKEVITLAVQQGERVLVTAPTNAAVDNMVEKLLHL 554
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 266 (98.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 103/346 (29%), Positives = 163/346 (47%)
Query: 526 RKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFST---ASSSYMLHSVAMKPLNFL 582
R+ S +NE+ L K+ E + L A++ +T ASS L + + +
Sbjct: 313 REKSSVWNEVKLLRKELKEREEAAMLE-SLTSAAVVLATNTGASSDGPLKLLPDTHFDVV 371
Query: 583 VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXX 642
VIDE AQ E+ IPL L K +L GD QLP S + A SL E
Sbjct: 372 VIDECAQALEASCWIPL-LKARK-CILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEH 429
Query: 643 XXXX--XXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMY----G-PY 695
+QYRMH +I + + Y ++ P+V + R LPG G P
Sbjct: 430 GARVVRTLTVQYRMHQAIMRWASEALYHGQLTAHPSVA--GHLLRDLPGVAATEETGIPL 487
Query: 696 SFINVFG-GR---EEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQV 751
++ G G E+ + S N EV +V + L + + + I +++PY QV
Sbjct: 488 LLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASD---IAVITPYNLQV 544
Query: 752 AAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVA 811
+++ L ++ +++ SVDGFQG E++ +++S VRSN G +GF++ RR+NVA
Sbjct: 545 DLLRQSLAHRHPE-----LEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVA 599
Query: 812 LTRARHCLWILGNERTLTRNRSVWKALVDD----AKARQCFFNADD 853
+TRAR + ++ + RT++ N + K LVD + R F DD
Sbjct: 600 VTRARRHVAVVCDSRTVS-NHAFLKTLVDHFTEHGEVRTAFEYLDD 644
Score = 98 (39.6 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVER 285
+I GPPGTGKT TV +++ ++ + L C P+ +A+ L R+ + K+ + R
Sbjct: 210 IIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAPSNIAVDNLVERLARC-KQKILR 263
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 266 (98.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 103/346 (29%), Positives = 163/346 (47%)
Query: 526 RKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFST---ASSSYMLHSVAMKPLNFL 582
R+ S +NE+ L K+ E + L A++ +T ASS L + + +
Sbjct: 313 REKSSVWNEVKLLRKELKEREEAAMLE-SLTSAAVVLATNTGASSDGPLKLLPDTHFDVV 371
Query: 583 VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXX 642
VIDE AQ E+ IPL L K +L GD QLP S + A SL E
Sbjct: 372 VIDECAQALEASCWIPL-LKARK-CILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEH 429
Query: 643 XXXX--XXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMY----G-PY 695
+QYRMH +I + + Y ++ P+V + R LPG G P
Sbjct: 430 GARVVRTLTVQYRMHQAIMRWASEALYHGQLTAHPSVA--GHLLRDLPGVAATEETGIPL 487
Query: 696 SFINVFG-GR---EEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQV 751
++ G G E+ + S N EV +V + L + + + I +++PY QV
Sbjct: 488 LLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASD---IAVITPYNLQV 544
Query: 752 AAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVA 811
+++ L ++ +++ SVDGFQG E++ +++S VRSN G +GF++ RR+NVA
Sbjct: 545 DLLRQSLAHRHPE-----LEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVA 599
Query: 812 LTRARHCLWILGNERTLTRNRSVWKALVDD----AKARQCFFNADD 853
+TRAR + ++ + RT++ N + K LVD + R F DD
Sbjct: 600 VTRARRHVAVVCDSRTVS-NHAFLKTLVDHFTEHGEVRTAFEYLDD 644
Score = 98 (39.6 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVER 285
+I GPPGTGKT TV +++ ++ + L C P+ +A+ L R+ + K+ + R
Sbjct: 210 IIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAPSNIAVDNLVERLARC-KQKILR 263
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 273 (101.2 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 103/343 (30%), Positives = 163/343 (47%)
Query: 530 SSF-NELNLPSAVEKDLLEDLLKRFCLKRASLFFST---ASSSYMLHSVAMKPLNFLVID 585
S+F NE+ L K+ E + + L A + +T ASS L + + +V+D
Sbjct: 316 SNFRNEIKLLRKELKEREEAAIVQ-SLTAADVVLATNTGASSDGPLKLLPENHFDVVVVD 374
Query: 586 EAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXX 645
E AQ E+ IPL L K +L GD QLP S + A RSL E
Sbjct: 375 ECAQALEASCWIPL-LKAPK-CILAGDHRQLPPTTISHKAALAGLSRSLMERLVEKHGAG 432
Query: 646 XXX--XIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPG-----PMYGPYSFI 698
+QYRMH +I+ + + Y ++ P+V + + LPG P I
Sbjct: 433 AVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVA--GHLLKDLPGVADTEETSVPLLLI 490
Query: 699 NVFG-GREEFIEHSCR---NMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAI 754
+ G G E E + N EV +V + L +++ + I +++PY QV +
Sbjct: 491 DTAGCGLLELDEEDSQSKGNPGEVRLVTLHIQALVDAGVHAGD---IAVIAPYNLQVDLL 547
Query: 755 QEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTR 814
++ L +K+ +++ SVDGFQG E++ +I++ VRSN G +GF++ RR+NVA+TR
Sbjct: 548 RQSLSNKHPE-----LEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTR 602
Query: 815 ARHCLWILGNERTLTRNRSVWKALVD----DAKARQCFFNADD 853
AR + ++ + RT+ N + K LVD + R F DD
Sbjct: 603 ARRHVAVICDSRTVN-NHAFLKTLVDYFTEHGEVRTAFEYLDD 644
Score = 101 (40.6 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVER 285
V +I GPPGTGKT TV +++ ++ + L C P+ VA+ L R+ L K+ + R
Sbjct: 208 VAIIHGPPGTGKTTTVVEIILQAVKQGLKILCCAPSNVAVDNLVERLA-LCKKRILR 263
Score = 45 (20.9 bits), Expect = 7.1e-17, Sum P(3) = 7.1e-17
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 267 AIKELASRVVKLVKESVERDC------RDALFFP--LGEILLLGNN 304
++KEL SR V L+K V C R F P LG +++L +N
Sbjct: 36 SLKELQSRGVCLLKLQVSSQCTGLYGQRLVTFEPRKLGPVVVLPSN 81
Score = 41 (19.5 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1649 KRFLVQVRRLDDSLAQAMQVASSPEEWKSRG 1679
KR +Q RRLD L + +S + K RG
Sbjct: 959 KRAQLQ-RRLDKKLGELSSQRTSKRKEKERG 988
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 270 (100.1 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 106/343 (30%), Positives = 163/343 (47%)
Query: 530 SSF-NELNLPSAVEKDLLEDLLKRFCLKRASLFFST---ASSSYMLHSVAMKPLNFLVID 585
S+F +E+ L KD E + L AS+ +T AS+ L + + +VID
Sbjct: 314 SNFRDEIKLLRKELKDREEAAMLE-SLAAASVVLATNTGASADGPLKLLPDSHFDMVVID 372
Query: 586 EAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXX 645
E AQ E+ IPL L K +L GD QLP + S + A SL E
Sbjct: 373 ECAQALEASCWIPL-LKARK-CILAGDHKQLPPTIVSHKAALAGLSLSLMERLAERHGAG 430
Query: 646 XXX--XIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMY----G-PYSFI 698
+QYRMH +I+ + + Y ++ P+V + R LPG G P +
Sbjct: 431 ALRMLTVQYRMHQAIARWASEALYHGQLTAHPSVA--GHLLRDLPGVAATEETGVPLLLV 488
Query: 699 NVFG-GR---EEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAI 754
+ G G EE E S N EV +V + L + + + I +++PY QV +
Sbjct: 489 DTAGCGLLELEEDDEQSKGNPGEVRLVGLHVQALVDAGVRAAD---IAVITPYNLQVDLL 545
Query: 755 QEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTR 814
++ L + +++ SVDGFQG E++ +I+S VRSN G +GF++ RR+NVA+TR
Sbjct: 546 RQSLAHRLPE-----LEIRSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTR 600
Query: 815 ARHCLWILGNERTLTRNRSVWKALVD----DAKARQCFFNADD 853
AR + ++ + RT++ N + K LVD + R F DD
Sbjct: 601 ARRHVAVVCDSRTVS-NHAFLKTLVDYLTEHGEVRTAFEYLDD 642
Score = 93 (37.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
+I GPPGTGKT TV +++ ++ + L C P+ VA+ L R+ +
Sbjct: 208 IIHGPPGTGKTTTVVEIILQAVKRGSKVLCCAPSNVAVDNLVERLAQ 254
Score = 40 (19.1 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 266 VAIKELASRVVKLVKESVERDCRDALFFPLGEILL 300
V++KEL SR V L+K V R L+ G +L+
Sbjct: 35 VSLKELQSRGVCLLKLQVSSQ-RTGLY---GRLLI 65
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 167 (63.8 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 772 VMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRN 831
V +VD FQG E+ II S VR+N IGF+ + RR+NVALTRA+H L ++GN+ L +
Sbjct: 1038 VATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKG 1097
Query: 832 RSVWKALVDDAKARQCFF 849
+WK + + ++ F
Sbjct: 1098 DPLWKDYITYLEEQEVIF 1115
Score = 166 (63.5 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 58/203 (28%), Positives = 94/203 (46%)
Query: 555 LKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 614
+ ++ + F+T ++ +K +++DEA Q E+ + +PL L GI++ V GDE
Sbjct: 790 VSQSQIIFTTNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEK 849
Query: 615 QLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXI--QYRMHPSISFFPNSYFYENKIH 672
QL S S+ SLFE + QYRMHP IS FP Y ++
Sbjct: 850 QL-----SSFSNIPQLETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELK 904
Query: 673 DSPTVEKRSYEKRFLPGPMY----GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNL 728
D T E++++ P Y GP S V + + + + N E ++KI+ L
Sbjct: 905 DGVTDEQKAWPGVQHPLFFYQCDLGPES--RVRSTQRDIVGFTYENKHECVEIVKIIQIL 962
Query: 729 YKGWINSKEKLS-IGIVSPYIAQ 750
++ K L IG+++PY AQ
Sbjct: 963 M---LDKKVPLEEIGVITPYSAQ 982
Score = 85 (35.0 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 32/136 (23%), Positives = 69/136 (50%)
Query: 174 KVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHMKGNLKIIKELLCTDSGATVQLIW 233
++ K I + + +K + I+ NR ++S + + K E + +S + ++
Sbjct: 617 RITNPKFIDLLLGQKPIKEIYFDNRLK----FSSDKLNRSQKTAVEHVLNNS---ITILQ 669
Query: 234 GPPGTGKTKTVSMLLVILLQM--KFRTLVCTPTIVAIKELASRV------VKLVKE-SVE 284
GPPGTGKT T+ +++ +++ F L + +AI +A ++ +K+++ S +
Sbjct: 670 GPPGTGKTSTIEEIIIQVIERFHAFPILCVAASNIAIDNIAEKIMENRPQIKILRILSKK 729
Query: 285 RDCRDALFFPLGEILL 300
++ + + PLGEI L
Sbjct: 730 KEQQYSDDHPLGEICL 745
Score = 41 (19.5 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 1605 NEVKHNI-LCSELKQLYVAITRTRQRLWIWENKEEFSK--PMF-DY 1646
N ++ I + ++L VA+TR + L + NK K P++ DY
Sbjct: 1059 NNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKGDPLWKDY 1104
Score = 38 (18.4 bits), Expect = 2.6e-16, Sum P(4) = 2.6e-16
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 157 ANVTEDEN-EIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSN 201
+N+ + N E+ K N K+ + S + L++ +N T N
Sbjct: 112 SNLNANRNGEVLCDKCLPKSNRAKDFVSEKSGRFLYIYLGLNETQN 157
Score = 37 (18.1 bits), Expect = 2.6e-16, Sum P(4) = 2.6e-16
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 313 VEEIYLDYRVKRLAD 327
++EIY D R+K +D
Sbjct: 633 IKEIYFDNRLKFSSD 647
Score = 37 (18.1 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 538 PSAVEKDLLEDLLKR 552
P + ++DLL D+L +
Sbjct: 978 PYSAQRDLLSDILTK 992
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 257 (95.5 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 105/343 (30%), Positives = 161/343 (46%)
Query: 530 SSF-NELNLPSAVEKDLLEDLLKRFCLKRASLFFST---ASSSYMLHSVAMKPLNFLVID 585
S+F NE+ L K+ E + L A++ +T AS+ L + + +VID
Sbjct: 317 SNFRNEIKLLRKELKEREEAAMLE-SLTSANVVLATNTGASADGPLKLLPESYFDVVVID 375
Query: 586 EAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXX 645
E AQ E+ IPL L K +L GD QLP S + A SL E
Sbjct: 376 ECAQALEASCWIPL-LKARK-CILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGAR 433
Query: 646 X--XXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMY----G-PYSFI 698
+QYRMH +I + + Y ++ +V + R LPG G P +
Sbjct: 434 VVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLL--RDLPGVAATEETGVPLLLV 491
Query: 699 NVFG-GR---EEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAI 754
+ G G EE E S N EV +V + L + +++ I +VSPY QV +
Sbjct: 492 DTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARD---IAVVSPYNLQVDLL 548
Query: 755 QEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTR 814
++ L ++ +++ SVDGFQG E++ +I+S VRSN G +GF++ RR+NVA+TR
Sbjct: 549 RQSLVHRHPE-----LEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTR 603
Query: 815 ARHCLWILGNERTLTRNRSVWKALVD----DAKARQCFFNADD 853
AR + ++ + RT+ N + K LV+ + R F DD
Sbjct: 604 ARRHVAVICDSRTVN-NHAFLKTLVEYFTQHGEVRTAFEYLDD 645
Score = 99 (39.9 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVER 285
+I GPPGTGKT TV +++ ++ + L C P+ +A+ L R+ L K+ + R
Sbjct: 211 IIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLA-LCKQRILR 264
Score = 38 (18.4 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 266 VAIKELASRVVKLVKESVERDCRDALF 292
+++KEL SR V L+K V R L+
Sbjct: 35 ISLKELQSRGVCLLKLQVSSQ-RTGLY 60
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 266 (98.7 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 98/341 (28%), Positives = 162/341 (47%)
Query: 530 SSF-NELNLPSAVEKDLLEDLLKRFCLKRASLFFST---ASSSYMLHSVAMKPLNFLVID 585
S+F NE+ L K+ E + + L A + +T AS+ L + + +V+D
Sbjct: 316 SNFRNEIKLLRKELKEREEAAIVQ-SLSAADVVLATNTGASTDGPLKLLPEDYFDVVVVD 374
Query: 586 EAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXX 645
E AQ E+ IPL L K +L GD QLP S + A RSL E
Sbjct: 375 ECAQALEASCWIPL-LKAPK-CILAGDHKQLPPTTVSHKAALAGLSRSLMERLAEKHGAA 432
Query: 646 XXX--XIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPG-----PMYGPYSFI 698
+QYRMH +I+ + + Y ++ P+V + + LPG P I
Sbjct: 433 VVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVA--GHLLKDLPGVADTEETSVPLLLI 490
Query: 699 NVFG-GREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLS-IGIVSPYIAQVAAIQE 756
+ G G E E ++ V + L++ + +++ + I +++PY QV +++
Sbjct: 491 DTAGCGLLELEEEDSQSKGNPGEVRLVTLHI-QALVDAGVQAGDIAVIAPYNLQVDLLRQ 549
Query: 757 KLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRAR 816
L +K+ +++ SVDGFQG E++ +I++ VRSN G +GF++ RR+NVA+TRAR
Sbjct: 550 SLSNKHPE-----LEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRAR 604
Query: 817 HCLWILGNERTLTRNRSVWKALVD----DAKARQCFFNADD 853
+ ++ + T+ N + K LVD + R F DD
Sbjct: 605 RHVAVICDSHTVN-NHAFLKTLVDYFTEHGEVRTAFEYLDD 644
Score = 102 (41.0 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVER 285
V +I GPPGTGKT TV +++ ++ + L C P+ +A+ L R+ L K+ + R
Sbjct: 208 VAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLA-LCKKQILR 263
Score = 39 (18.8 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1649 KRFLVQVRRLDDSLAQAMQVASSPEEWKSRG 1679
KR +Q R+LD L + +S ++ K RG
Sbjct: 958 KRAQLQ-RKLDKKLGELSSQRTSKKKEKERG 987
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 266 (98.7 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 98/341 (28%), Positives = 162/341 (47%)
Query: 530 SSF-NELNLPSAVEKDLLEDLLKRFCLKRASLFFST---ASSSYMLHSVAMKPLNFLVID 585
S+F NE+ L K+ E + + L A + +T AS+ L + + +V+D
Sbjct: 316 SNFRNEIKLLRKELKEREEAAIVQ-SLSAADVVLATNTGASTDGPLKLLPEDYFDVVVVD 374
Query: 586 EAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXX 645
E AQ E+ IPL L K +L GD QLP S + A RSL E
Sbjct: 375 ECAQALEASCWIPL-LKAPK-CILAGDHKQLPPTTVSHKAALAGLSRSLMERLAEKHGAA 432
Query: 646 XXX--XIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPG-----PMYGPYSFI 698
+QYRMH +I+ + + Y ++ P+V + + LPG P I
Sbjct: 433 VVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVA--GHLLKDLPGVADTEETSVPLLLI 490
Query: 699 NVFG-GREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLS-IGIVSPYIAQVAAIQE 756
+ G G E E ++ V + L++ + +++ + I +++PY QV +++
Sbjct: 491 DTAGCGLLELEEEDSQSKGNPGEVRLVTLHI-QALVDAGVQAGDIAVIAPYNLQVDLLRQ 549
Query: 757 KLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRAR 816
L +K+ +++ SVDGFQG E++ +I++ VRSN G +GF++ RR+NVA+TRAR
Sbjct: 550 SLSNKHPE-----LEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRAR 604
Query: 817 HCLWILGNERTLTRNRSVWKALVD----DAKARQCFFNADD 853
+ ++ + T+ N + K LVD + R F DD
Sbjct: 605 RHVAVICDSHTVN-NHAFLKTLVDYFTEHGEVRTAFEYLDD 644
Score = 102 (41.0 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVER 285
V +I GPPGTGKT TV +++ ++ + L C P+ +A+ L R+ L K+ + R
Sbjct: 208 VAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLA-LCKKQILR 263
Score = 39 (18.8 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1649 KRFLVQVRRLDDSLAQAMQVASSPEEWKSRG 1679
KR +Q R+LD L + +S ++ K RG
Sbjct: 958 KRAQLQ-RKLDKKLGELSSQRTSKKKEKERG 987
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 256 (95.2 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 83/283 (29%), Positives = 133/283 (46%)
Query: 555 LKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 614
+K A + +T + + + + + + ++IDE AQ E I L L G + +L GD
Sbjct: 340 IKNADVILTTLTGA-LTRKLDNRTFDLVIIDEGAQALEVACWIAL-LKGSR-CILAGDHL 396
Query: 615 QLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXX--XIQYRMHPSISFFPNSYFYENKIH 672
QLP ++S ++ GR+LFE +QYRMH I + + Y+NKI
Sbjct: 397 QLPPTIQSAEAERKGLGRTLFERLADLYGDEIKSMLTVQYRMHELIMNWSSKELYDNKIT 456
Query: 673 DSPTVEKR---SYEKRFLPGPMYGPYSFINVFG-GREEFI--EHSCRNMVEVSVVMKILL 726
+V E ++ G EE E S N E V M
Sbjct: 457 AHSSVASHMLFDLENVTKSSSTEATLLLVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAK 516
Query: 727 NLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDII 786
L + + + IGI++PY AQV ++ G + +++ +VDGFQG E++ I
Sbjct: 517 RLMESGVQPSD---IGIITPYAAQVMLLRILRGKEEKLKD---MEISTVDGFQGREKEAI 570
Query: 787 IISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLT 829
IIS VRSN+ +GF+ + RR+NVA+TR+R I+ + T++
Sbjct: 571 IISMVRSNSKKEVGFLKDQRRMNVAVTRSRRQCCIVCDTETVS 613
Score = 87 (35.7 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 32/108 (29%), Positives = 51/108 (47%)
Query: 225 SGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVV----KLVK 280
S V L+ GPPGTGKT TV +++ ++ + L C + +A+ + R+V KLV+
Sbjct: 203 SSKDVFLLHGPPGTGKTTTVVEIVLQEVKRGSKILACAASNIAVDNIVERLVPHKVKLVR 262
Query: 281 ES-VERDCRDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRVKRLAD 327
R L L +L G+N L D E L+ ++ + D
Sbjct: 263 VGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEMKALNGKLLKAKD 310
Score = 43 (20.2 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 21/103 (20%), Positives = 46/103 (44%)
Query: 316 IYLDYRVKRLADCFAPLTGWSHCFASMVEFLDNCVSQY-----HTYMENESMKQSEDING 370
I +D V+RL L H + + LD+ + ++ + N+ K+ + +NG
Sbjct: 244 IAVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEMKALNG 303
Query: 371 DIIKEKECGKEADASDVEIKPFLEFVRERFKCIINGDIIKEKE 413
++K K+ E++ + R+R + ++ D+IK +
Sbjct: 304 KLLKAKDKNTRR-LIQKELRTLGKEERKRQQLAVS-DVIKNAD 344
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 252 (93.8 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 92/304 (30%), Positives = 146/304 (48%)
Query: 565 ASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKV 624
ASS L + + +VIDE AQ E+ +PL L K +L GD QLP + S
Sbjct: 352 ASSDGPLKLLPDGHFDVVVIDECAQALEASCWVPL-LKARK-CILAGDHKQLPPTIISHK 409
Query: 625 SDEACFGRSLFEXXXXXXXXXXXX--XIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSY 682
+ A SL E +QYRMH +I+ + + Y ++ +V +
Sbjct: 410 AALAGLALSLMERLVEERGAGVLRMLTVQYRMHQAIAQWASEALYHGRLTAHASVA--GH 467
Query: 683 EKRFLPGPMY----G-PYSFINVFG-GR---EEFIEHSCRNMVEVSVVMKILLNLYKGWI 733
R LPG G P ++ G G EE E S N EV +V + L +
Sbjct: 468 LLRDLPGVAATEETGIPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVRLHVQALVDAGV 527
Query: 734 NSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRS 793
+ + + +++PY QV +++ L ++ +++ SVDGFQG E++ +I+S VRS
Sbjct: 528 PAGD---VAVITPYNLQVDLLRQSLAQRHPE-----LEIKSVDGFQGREKEAVILSFVRS 579
Query: 794 NNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALV----DDAKARQCFF 849
N G +GF++ RR+NVA+TRAR + ++ + RT++ N + K LV + + R F
Sbjct: 580 NRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVS-NHAFLKTLVAYFAEHGEVRTAFE 638
Query: 850 NADD 853
DD
Sbjct: 639 YLDD 642
Score = 96 (38.9 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVER 285
+I GPPGTGKT TV +++ ++ + L C P+ VA+ L R+ + K+ + R
Sbjct: 208 IIHGPPGTGKTTTVVEIILQAVKQGSKVLCCAPSNVAVDNLVERLARW-KQRIVR 261
Score = 39 (18.8 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 266 VAIKELASRVVKLVKESVERDCRDALF 292
V++KEL SR V L+K V R L+
Sbjct: 35 VSLKELQSRGVCLLKLQVSSQ-RTGLY 60
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 262 (97.3 bits), Expect = 9.3e-21, Sum P(3) = 9.3e-21
Identities = 96/305 (31%), Positives = 146/305 (47%)
Query: 540 AVEKDLLE--DLLKRFCLKRASLFFST---ASSSYMLHSVAMKPLNFLVIDEAAQLKESE 594
A+ K+L E + L AS+ +T ASS L + + +VIDE AQ E+
Sbjct: 321 ALRKELKEREETAMTAALTHASVVLATNTGASSDGPLKLLPENYFDLVVIDECAQALEAS 380
Query: 595 STIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXX--XIQY 652
IPL L K +L GD QLP + S + SL E +QY
Sbjct: 381 CWIPL-LKAPK-CILAGDHKQLPPTIISHKAAAKGLSLSLMERVIERYGEKVVKMLTVQY 438
Query: 653 RMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYG-----PYSFINVFG-GREE 706
RMH +I + +S Y ++ P+V + + LPG P I+ G G E
Sbjct: 439 RMHEAIMQWASSEMYGGRLTAHPSVAQHLLKD--LPGVTCTEETTIPLLLIDTAGCGLLE 496
Query: 707 FI---EHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYV 763
E S N EV +V + L + +++ + +V+PY QV ++E L +Y
Sbjct: 497 LEVEDEQSKGNPGEVQLVGLHIQALVDAGVKARD---VAVVAPYNLQVDMLREHLCHRYP 553
Query: 764 NSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILG 823
+++ SVDGFQG E++ +I+S VRSN G +GF++ RR+NVA+TRAR + I+
Sbjct: 554 E-----LEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAIIC 608
Query: 824 NERTL 828
+ RT+
Sbjct: 609 DSRTV 613
Score = 98 (39.6 bits), Expect = 9.3e-21, Sum P(3) = 9.3e-21
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRV 275
++ GPPGTGKT TV +++ +Q + L C P+ VA+ L R+
Sbjct: 207 IVHGPPGTGKTTTVVEIILQAVQQGLKVLCCAPSNVAVDNLVERL 251
Score = 37 (18.1 bits), Expect = 9.3e-21, Sum P(3) = 9.3e-21
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 1649 KRFLVQVRRLDDSLAQAMQVASSPEEWKSRG 1679
KR +Q RRLD L+ S ++ K +G
Sbjct: 946 KRAHLQ-RRLDKKLSDLTNQRKSKKKGKEKG 975
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 266 (98.7 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 99/317 (31%), Positives = 150/317 (47%)
Query: 555 LKRASLFFSTASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQLSGIKHAV--LF 610
L R L ST S+ +L++ + +F +++DEA Q E E+ I + + V L
Sbjct: 513 LTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLA 572
Query: 611 GDECQLPAMVESKVSDEACFGRS----LFEXXXX---XXXXXXXXXIQYRMHPSISFFPN 663
GD QL ++ S+ ++ G+S LFE YR HP I P+
Sbjct: 573 GDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYVTKLVKNYRCHPEILDLPS 632
Query: 664 SYFYENKIHDSPT-VEKRSYEKRFLPGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVV 721
FY+ ++ S + FLP + P F + G E E S N +E+S V
Sbjct: 633 KLFYDGELVASKEDTDSVLASLNFLPNKEF-PMVFYGIQGCDEREGNNPSWFNRIEISKV 691
Query: 722 MKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGG 781
++ + L +E IG+++PY QV I+E L + VKV SV+ FQG
Sbjct: 692 IETIKRLTANDCVQEE--DIGVITPYRQQVMKIKEVLDRLDMTE----VKVGSVEQFQGQ 745
Query: 782 EEDIIIISTVRS-------NNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTR---- 830
E+ +IIISTVRS + +GF+SNPRR NVA+TRA L I+GN + +
Sbjct: 746 EKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAISLLVIIGNPHIICKDMNW 805
Query: 831 NRSVWKALVDDAKARQC 847
N+ +W+ VD+ + C
Sbjct: 806 NKLLWRC-VDNNAYQGC 821
Score = 91 (37.1 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 40/127 (31%), Positives = 58/127 (45%)
Query: 155 SVANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNR-RIWNSLHMKGN 213
SV NV N I+T Y V+A + + + SL + +T I +L+ +
Sbjct: 343 SVYNVRFTYNRINTRRLYQAVDAAEMLDPNFLFPSLHSGKRMIKTKPFVPISPALNAEQI 402
Query: 214 LKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILL--QMKFRTLVCTPTIVAIKEL 271
I L C GA +I GPPGTGKT T+ +V L Q R LVC P+ A +
Sbjct: 403 CSIEMVLGC--KGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHI 460
Query: 272 ASRVVKL 278
+++ L
Sbjct: 461 LEKLLCL 467
Score = 40 (19.1 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 1434 NGNDGRQEKRQLSDIFN 1450
N N G +EK + SD +N
Sbjct: 873 NNNGGTKEKNEWSDGWN 889
Score = 39 (18.8 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 1168 GGKFATEGSLI--DTDDIDDAEK 1188
GGKF T G + + D+ D K
Sbjct: 980 GGKFETRGDFVAKEEDEWSDGWK 1002
Score = 37 (18.1 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 11/73 (15%), Positives = 28/73 (38%)
Query: 302 GNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVEFLDNCVSQYHTYMENES 361
G + + + + ++Y R R+ C + H ++ + + N +
Sbjct: 424 GTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLNAA 483
Query: 362 MKQSEDINGDIIK 374
+ E+I +II+
Sbjct: 484 TRSYEEIKPEIIR 496
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 305 (112.4 bits), Expect = 1.2e-20, Sum P(4) = 1.2e-20
Identities = 87/270 (32%), Positives = 145/270 (53%)
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVS-DEACFGRSLFEXXXX 640
+V+DE +Q+ E S +P+ + VL GD QLP ++ S E ++LF+
Sbjct: 624 VVLDECSQMTEPTSLLPIARFQCEKLVLVGDPKQLPPTIQGSESIHEKGLEQTLFDRLCL 683
Query: 641 XXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINV 700
QYR HP+IS N FYE + D + ++RS +LP + YS +N
Sbjct: 684 MGHKTILLRTQYRCHPAISAIANELFYEGNLIDGVSEKERSPLLDWLPTLCF--YS-VN- 739
Query: 701 FGGREEFI-EHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLG 759
G E+ ++S NM EV +K + L I+ ++G+++ Y +Q+ +Q L
Sbjct: 740 --GLEQIERDNSFYNMAEVHFTVKFIQALIASGIDGS---AVGVITFYKSQMYKLQNLLR 794
Query: 760 SKYVNSAGF---AVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRAR 816
S ++S F AV+V +VD FQG E++I+++S VR+ GF + +R+NVALTRA+
Sbjct: 795 S--IHSEAFPVKAVQVSTVDAFQGAEKEIVVLSCVRTRQ---TGFTDSEKRMNVALTRAK 849
Query: 817 HCLWILGNERTLTRNRSVWKALVDDAKARQ 846
L I+GN L++NR +++ +++ K R+
Sbjct: 850 RHLLIVGNLACLSKNR-LYERVINHCKGRE 878
Score = 51 (23.0 bits), Expect = 1.2e-20, Sum P(4) = 1.2e-20
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 1277 LDPSRVFTEIISHIKG---GLQSIEVVNGKLNREDYVNLSETRNSSLSRQKRE 1326
L +R++ +I+H KG GLQ +LN L E + S++K +
Sbjct: 861 LSKNRLYERVINHCKGRENGLQHGSQCEQQLNNVLKYYLEEKKEEEQSKKKEK 913
Score = 42 (19.8 bits), Expect = 1.2e-20, Sum P(4) = 1.2e-20
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQM 254
+ +I G G GK+ +S++++ L+Q+
Sbjct: 467 ITIIHGVFGAGKSFLLSVVILFLVQL 492
Score = 42 (19.8 bits), Expect = 1.2e-20, Sum P(4) = 1.2e-20
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 52 SFRSVGQYFESFVFPLLE---ETRANLMSGMEKISNAPFAQ-VVAFEDSKPYGSMLYDVK 107
S R++ +YF PL+ + ++ +I+ F ++ K YGS+ +V
Sbjct: 363 SLRNMEEYFNPSTLPLIPYLLKMNSDSEKSTRRINKRKFIPPAMSLVGKKTYGSVSTEVA 422
Query: 108 VD 109
++
Sbjct: 423 ME 424
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 252 (93.8 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 100/344 (29%), Positives = 159/344 (46%)
Query: 522 HFVLRKLLSSFNELNLP-SAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLN 580
H R + SS EL + EK L++ ++ L +T +S L + +
Sbjct: 365 HSERRVIQSSIKELRIDLKNREKSLIQQVIND---SNVILSTNTGASDSSLKGI--DNFD 419
Query: 581 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXX 640
++VIDE AQ E+ IP+Q G K +L GD QLP + S + + +LFE
Sbjct: 420 WVVIDECAQALEASCWIPIQ-KGNK-LLLAGDHQQLPPTIHSMEAAKMGLSITLFERIIK 477
Query: 641 XXXXXXXXX--IQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPG-----PMYG 693
+QYRM+ I + + FY +K+ +V P
Sbjct: 478 QYGDQVSRLLNVQYRMNHKIMDWSSMEFYNSKMIADKSVSNHLLVTGDSPKIRNTLTTTC 537
Query: 694 PYSFINVFG-GREEFIE---HSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIA 749
P I+ G EE + S N EV VV + + L + + + IG+++PY
Sbjct: 538 PLLMIDTSGCDMEESQDDEGESKFNNGEVIVVKRHIEKLIECGVKPND---IGVITPYNG 594
Query: 750 QVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGG--SIGFISNPRR 807
QV ++ L KY + +++ +VDGFQG E+D+IIIS VRSN +GF++ RR
Sbjct: 595 QVKLLKSYLSKKYSS-----MEIGTVDGFQGREKDVIIISMVRSNTDAPHKVGFLTEDRR 649
Query: 808 VNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNA 851
NVA+TRAR + ++ + T++ + + K +VD K F +A
Sbjct: 650 TNVAITRARKHVVVVCDTDTISSHEPL-KRMVDYFKLNGLFRSA 692
Score = 92 (37.4 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 211 KGNLKIIKE-LLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIK 269
KG + KE +L + S V I GPPGTGKT TV +V L++ + L C P+ +++
Sbjct: 233 KGLNQSQKEAILFSLSSNDVACIHGPPGTGKTTTVVEFIVQLIKSGKKVLACGPSNLSVD 292
Query: 270 ELASRVVKLVKES 282
+ ++++ S
Sbjct: 293 NMLEKLLEYSNSS 305
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 256 (95.2 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 87/302 (28%), Positives = 143/302 (47%)
Query: 565 ASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKV 624
ASS L + + +V+DE AQ E+ IPL L K +L GD QLP S
Sbjct: 354 ASSDGPLKLLPEDYFDVVVVDECAQALEASCWIPL-LKAPK-CILAGDHRQLPPTTVSHR 411
Query: 625 SDEACFGRSLFEXXXXXXXXXXXX--XIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSY 682
+ A RSL E +QYRMH +I + + Y + P+V +
Sbjct: 412 AALAGLSRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVA--GH 469
Query: 683 EKRFLPG-----PMYGPYSFINVFG-GREEFIEHSCRNMVEVSVVMKILLNLYKGWINSK 736
+ LPG P I+ G G E E ++ V + L++ + +++
Sbjct: 470 LLKDLPGVTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHI-QALVDAG 528
Query: 737 EKLS-IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNN 795
+ I +++PY QV +++ L +K+ +++ SVDGFQG E++ ++++ VRSN
Sbjct: 529 VQAGDIAVIAPYNLQVDLLRQSLSNKHPE-----LEIKSVDGFQGREKEAVLLTFVRSNR 583
Query: 796 GGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVD----DAKARQCFFNA 851
G +GF++ RR+NVA+TRAR + ++ + T+ N + + LVD + R F
Sbjct: 584 KGEVGFLAEDRRINVAVTRARRHVAVICDSHTVN-NHAFLETLVDYFTEHGEVRTAFEYL 642
Query: 852 DD 853
DD
Sbjct: 643 DD 644
Score = 98 (39.6 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVER 285
+I GPPGTGKT TV +++ ++ + L C P+ +A+ L R+ L K+ + R
Sbjct: 210 IIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLA-LCKKRILR 263
Score = 41 (19.5 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 1649 KRFLVQVRRLDDSLAQAMQVASSPEEWKSRG 1679
KR +Q RRLD L + +S ++ K RG
Sbjct: 963 KRAQLQ-RRLDKKLGELSSQRTSRKKEKERG 992
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 166 (63.5 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 771 KVMSVDGFQGGEEDIIIISTVRSNN-GGSIGFISNPRRVNVALTRARHCLWILGNERTLT 829
+V +VD FQG ++D II++ VR++ GSIGF+++ +R+NV +TRA++ L+ILG+ RTL
Sbjct: 274 EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLM 333
Query: 830 RNRSVWKALVDDAKARQCFFNADD 853
N+ W L+ DA+ R D
Sbjct: 334 ENQH-WYELIQDAQKRGAIIKTCD 356
Score = 165 (63.1 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 61/217 (28%), Positives = 93/217 (42%)
Query: 578 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLF-- 635
P + +++DEA Q E E+ PL + VL GD QLP V S + E + +S+
Sbjct: 23 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 81
Query: 636 ---------EXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF 686
E IQYRMHP I FP++Y Y + + E +
Sbjct: 82 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTETIRCSSEW 141
Query: 687 LPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSP 746
P + PY +V G E+ S N+ E+ +VM+I+ L K +IGI++
Sbjct: 142 -P---FQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITH 196
Query: 747 YIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEE 783
Y AQ IQ+ L ++ + G +M + Q E
Sbjct: 197 YKAQKTMIQKDLEKEF-DKKGLLQPIMMGESRQQDSE 232
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 288 (106.4 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 91/331 (27%), Positives = 161/331 (48%)
Query: 520 ECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPL 579
E H ++++ L+ + + ++E+ L R LK+ + T ++ M L
Sbjct: 569 ELHALMKEDLTPTERVYVRKSIEQHKLGT--NRTLLKQVRVVGVTCAACPF---PCMNDL 623
Query: 580 NF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSDEACFGRSLFE 636
F +V+DE +Q+ E S +P+ + +L GD QLP ++ S + E ++LF+
Sbjct: 624 KFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFD 683
Query: 637 XXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYS 696
QYR HP+IS N FY+ + + T +RS +LP
Sbjct: 684 RLCLMGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLC 738
Query: 697 FINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQE 756
F NV G + ++S N+ E + +K++ +L I IG+++ Y +Q+ +
Sbjct: 739 FYNVKGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGS---MIGVITLYKSQMYKLCH 795
Query: 757 KLGSKYVNSAGF-AVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
L + + V+V +VD FQG E++III+S VR+ +GFI + +R+NVALTR
Sbjct: 796 LLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRG 852
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
+ L I+GN L +N+ +W ++ + R+
Sbjct: 853 KRHLLIVGNLACLRKNQ-LWGRVIQHCEGRE 882
Score = 45 (20.9 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 29 FSWSLEDIFNEDLFKDKVK--RIPFSFRSVGQYFESFVFPLLEETRANLMSGME 80
F W LED+ ++ + + +S+G Y S PL EE + + G +
Sbjct: 207 FKW-LEDVTPGYSTQEGARPGMVLSDIKSIGLYLRSQKIPLYEECQLLVRKGFD 259
Score = 37 (18.1 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 49 IPFSFRSVGQYFESFVFPLLEETRANLMSGMEKISNA 85
IP F+S Y ++F L+E L + + A
Sbjct: 108 IPAVFQSPAHYKQTFTSCLIEHLNILLFGLAQNLQKA 144
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 296 (109.3 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 93/336 (27%), Positives = 164/336 (48%)
Query: 515 HKRRSECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSV 574
+++ E H ++++ L+ + + ++E+ L + LK+ + T ++
Sbjct: 663 NEQLKELHGLMKEDLTPLERVYVRKSIEQHKLGT--NKTLLKQVRVVGVTCAACPF---P 717
Query: 575 AMKPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKVSDEACFG 631
M L F +V+DE +Q+ E S +P+ + +L GD QL P + S + E
Sbjct: 718 CMNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLSPTIQGSDAAHENGLE 777
Query: 632 RSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPM 691
++LF+ QYR HP+IS N FYE + D + +R +LP
Sbjct: 778 QTLFDRLCLMGHKPVLLRTQYRCHPAISDISNDLFYEGNLVDGISETERGPLLEWLP--- 834
Query: 692 YGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQV 751
F N+ G + ++S N+ E + +K++ +L I IG+++ Y +Q+
Sbjct: 835 --TLCFYNIKGPEQIERDNSFHNVAEAAFTLKLIQSLIASGIAGS---MIGVITLYKSQM 889
Query: 752 AAIQEKLGS-KYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNV 810
+ L + + N AV+V +VD FQG E++III+S VR+ +GFI + +R+NV
Sbjct: 890 YKLCHLLSAVDFDNPDIKAVQVSTVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNV 946
Query: 811 ALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
ALTR R L I+GN L +NR +W ++ + R+
Sbjct: 947 ALTRGRRHLLIVGNLACLRKNR-LWGRVIQHCEGRR 981
Score = 49 (22.3 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 29 FSWSLEDIFNEDLFKDK-VKRIPFS-FRSVGQYFESFVFPLLEETRANLMSGME 80
F W LE++ L +++ + I S +S+G Y S PL EE + + G +
Sbjct: 306 FKW-LEEVTPGYLTQEESLPSIVLSDIKSIGLYLRSQNIPLFEECQLLVRKGFD 358
Score = 38 (18.4 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 8/34 (23%), Positives = 21/34 (61%)
Query: 229 VQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 262
+ +I G G GK+ ++++++ +Q+ ++ V T
Sbjct: 570 ITIIHGVFGAGKSYLLAVVILFFVQLFEKSEVLT 603
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 298 (110.0 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 93/336 (27%), Positives = 164/336 (48%)
Query: 515 HKRRSECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSV 574
+++ E H ++++ L+ + + ++E+ L + LK+ + T ++
Sbjct: 565 NEQLKELHALMKEDLTPVERVYVRKSIEQHKLGT--NKTLLKQVRVVGVTCAACPF---P 619
Query: 575 AMKPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSDEACFG 631
M L F +V+DE +Q+ E S +P+ + +L GD QLP ++ S + E
Sbjct: 620 CMNDLKFPVVVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLE 679
Query: 632 RSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPM 691
++LF+ QYR HP+IS N FYE + + + +RS +LP
Sbjct: 680 QTLFDRLCLMGHKPILLRTQYRCHPTISAIANDLFYEGNLMNGISETERSPLLEWLP--- 736
Query: 692 YGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQV 751
F NV G + +S N+ E + +K++ +L I IG+++ Y +Q+
Sbjct: 737 --TLCFYNVKGLEQIERGNSFHNVAEAAFTLKLIQSLIASGIAGS---MIGVITLYKSQM 791
Query: 752 AAIQEKLGSKYVNSAGF-AVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNV 810
+ L + + AV+V +VD FQG E++III+S VR+ +GFI + +R+NV
Sbjct: 792 YKLCHLLSAMDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNV 848
Query: 811 ALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
ALTR R L I+GN L +NR +W ++ + R+
Sbjct: 849 ALTRGRRHLLIVGNLACLRKNR-LWGRVIQHCEGRE 883
Score = 43 (20.2 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 29 FSWSLEDIFNEDLFKDKV--KRIPFSFRSVGQYFESFVFPLLEETRANLMSGME 80
F W E++ L ++K + +S+G Y S PL EE + + G +
Sbjct: 208 FKW-FEEMTPGYLTQEKSLPSMVLSDIKSIGFYLRSQKIPLYEECQLFVRKGFD 260
Score = 38 (18.4 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 16/91 (17%), Positives = 41/91 (45%)
Query: 170 PTYFKVNATKEI-QIDVSKK---SLFVIFLINRTSNRRIWNSLHMKGNLKIIKEL--LCT 223
P + +N E+ I+ + K L + +N+ + M + + ++E L
Sbjct: 408 PAFSNINTKFELLSIEATLKLASELIQVHKLNKDQAAALIQIAQMMASRQSVEEAKELAI 467
Query: 224 DSGATVQLIWGPPGTGKTKTVSMLLVILLQM 254
+ + +I G G GK+ ++++++ +Q+
Sbjct: 468 HT-LPITIIHGVFGAGKSYLLAVVILFFVQL 497
Score = 37 (18.1 bits), Expect = 4.9e-19, Sum P(3) = 4.9e-19
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 322 VKRLADCFAPLT 333
+K + DCF P T
Sbjct: 368 LKNIRDCFNPAT 379
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 288 (106.4 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 91/331 (27%), Positives = 161/331 (48%)
Query: 520 ECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPL 579
E H ++++ L+ + + ++E+ L R LK+ + T ++ M L
Sbjct: 1747 ELHALMKEDLTPTERVYVRKSIEQHKLGT--NRTLLKQVRVVGVTCAACPF---PCMNDL 1801
Query: 580 NF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSDEACFGRSLFE 636
F +V+DE +Q+ E S +P+ + +L GD QLP ++ S + E ++LF+
Sbjct: 1802 KFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFD 1861
Query: 637 XXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYS 696
QYR HP+IS N FY+ + + T +RS +LP
Sbjct: 1862 RLCLMGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLC 1916
Query: 697 FINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQE 756
F NV G + ++S N+ E + +K++ +L I IG+++ Y +Q+ +
Sbjct: 1917 FYNVKGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGS---MIGVITLYKSQMYKLCH 1973
Query: 757 KLGSKYVNSAGF-AVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRA 815
L + + V+V +VD FQG E++III+S VR+ +GFI + +R+NVALTR
Sbjct: 1974 LLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRG 2030
Query: 816 RHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
+ L I+GN L +N+ +W ++ + R+
Sbjct: 2031 KRHLLIVGNLACLRKNQ-LWGRVIQHCEGRE 2060
Score = 45 (20.9 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 29 FSWSLEDIFNEDLFKDKVK--RIPFSFRSVGQYFESFVFPLLEETRANLMSGME 80
F W LED+ ++ + + +S+G Y S PL EE + + G +
Sbjct: 1385 FKW-LEDVTPGYSTQEGARPGMVLSDIKSIGLYLRSQKIPLYEECQLLVRKGFD 1437
Score = 37 (18.1 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 49 IPFSFRSVGQYFESFVFPLLEETRANLMSGMEKISNA 85
IP F+S Y ++F L+E L + + A
Sbjct: 1286 IPAVFQSPAHYKQTFTSCLIEHLNILLFGLAQNLQKA 1322
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 233 (87.1 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 72/215 (33%), Positives = 112/215 (52%)
Query: 652 YRMHPSISFFPNSYFYENKIHD-SPTVEKRSY-EKRFLPGPMYGPYSFINVFGGRE-EFI 708
YR HP+I PN FYEN++ + +E+ ++ + LP + P F V G E E
Sbjct: 748 YRSHPAILKIPNELFYENELQVFANQMEREAFCQWEHLPRKGF-PVVFHGVMGKDEREAN 806
Query: 709 EHSCRNMVEVSVVMKILLNLYKGW-INSKEKLS---IGIVSPYIAQVAAIQEKLGSKYVN 764
S N+ E+ V++ L NL + KL IGI++PY QV I++ L +
Sbjct: 807 SPSFFNVTEIEVIVNYLNNLMQTQGKKGLPKLGPNDIGIIAPYRKQVEKIRKALNTVGEL 866
Query: 765 SAGFAVKVMSVDGFQGGEEDIIIISTVRSN-------NGGSIGFISNPRRVNVALTRARH 817
+KV SV+ FQG E +II+STVRS+ +IGF+SN +R NVA+TRA+
Sbjct: 867 KKWKDIKVGSVEEFQGQERKVIIVSTVRSSVNYVKMDQDFNIGFLSNEKRFNVAMTRAKG 926
Query: 818 CLWILGNERTLTRNRSVWKALVDDAKARQCFFNAD 852
L ++GN L+++ + W+ + + Q + D
Sbjct: 927 LLIVVGNPVILSKDPT-WQKFIQYCEQEQGYTGFD 960
Score = 77 (32.2 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 217 IKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRT--LVCTPTIVAIKELASR 274
++ +L S LI+GPPGTGKT TV + + + K ++ L C P+ A L R
Sbjct: 524 VQHILSGSSRPAPYLIFGPPGTGKTVTVVEAIKQVDKSKAQSHILACAPSNSACDLLCER 583
Query: 275 VV 276
++
Sbjct: 584 LL 585
Score = 67 (28.6 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 574 VAMKPLNFLVIDEAAQLKESESTIPLQ--LSGIK-HAVLFGDECQLPAMVESKVSDEACF 630
VAM + IDEA Q E E I + L +K VL GD QL ++ S ++
Sbjct: 652 VAMGHFTHIFIDEAGQAVEPECIIGIAGLLDPLKGQLVLAGDPQQLGPVLRSPLAQLHGL 711
Query: 631 GRSLFE 636
G+SL E
Sbjct: 712 GQSLLE 717
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 303 (111.7 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 94/304 (30%), Positives = 154/304 (50%)
Query: 542 EKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVA-MKPLNFLVIDEAAQLKESESTIPLQ 600
E +++ LL +K+ ++ +T S H + + ++IDE AQ E + IPL
Sbjct: 1884 EAKVMKALLFLEAVKKYNVVIATCVGSG--HEIFDNEKFERVIIDECAQSIEPSNLIPLG 1941
Query: 601 LSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXX-XXXXXIQYRMHPSIS 659
+ VL GD QLP + S + + +SL E Q RMH SI
Sbjct: 1942 -HYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAPVHLLNTQRRMHLSIC 2000
Query: 660 FFPNSYFYENKIHDSP-TVEKRSYEKRFL-PGPMYGPYSFINVFGGR-----EEFIEHSC 712
FPN +FY+NK+ + T E R K FL P P +FI+V G+ E S
Sbjct: 2001 VFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCR-LAFIDVSIGKPGSKFENAYGTSK 2059
Query: 713 RNMVEVSVVMKILLNLY-KGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVK 771
N+ E+ ++ +L ++ +G ++ E IGI++ Y AQ +++ + + A ++
Sbjct: 2060 FNLYEIEPLITVLKSIINEGCVSVDE---IGILTAYDAQKMKLKKAVQDAFSYEASHRIE 2116
Query: 772 VMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRN 831
+ S+DGFQG E+D+I+ S VRSN +GF+ + RR+NV LTRA+ + + G++ TL +
Sbjct: 2117 IDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKRGVILFGDQFTLAND 2176
Query: 832 RSVW 835
+ W
Sbjct: 2177 PANW 2180
Score = 58 (25.5 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 207 SLHMKGNLKI--IKELLCTDS-GATVQLIWGPPGTGKTKTVSMLL 248
S+++ NL + ++L C + + L+ GPPGTGKT ++
Sbjct: 1768 SINLPTNLPLNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAII 1812
Score = 41 (19.5 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 155 SVANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSL 208
S+ + D + + F TK+ + +K L++ L+N ++ R+ +L
Sbjct: 1605 SITSTKSDNTVYNINIRIFSAENTKKANVKYNKYRLYL--LLNIVTHERMLQAL 1656
Score = 38 (18.4 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 14 KKRAVPYDYGFTDTVFSWSLEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVFPLLEE 70
K + Y TD + + D+ ++DL K I F + + FV LL E
Sbjct: 1292 KNNLIEY-ISSTDRKNAQFIRDLISKDLNKALNMAIQFIMQYSSNAWSIFVVYLLRE 1347
Score = 38 (18.4 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 194 FLINRTSNRRIWNSLHMKGNLK 215
+++N N++ +N+L K N K
Sbjct: 71 YILNNNINKKNYNALFYKLNNK 92
Score = 37 (18.1 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 355 TYMENESMKQSEDINGDIIKEKECG---KEADA 384
T E E MK ++ DI+ K C K+ DA
Sbjct: 1565 TNEEKEWMKSTQMREDDIVLLKPCDTLLKDEDA 1597
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 303 (111.7 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 94/304 (30%), Positives = 154/304 (50%)
Query: 542 EKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVA-MKPLNFLVIDEAAQLKESESTIPLQ 600
E +++ LL +K+ ++ +T S H + + ++IDE AQ E + IPL
Sbjct: 1884 EAKVMKALLFLEAVKKYNVVIATCVGSG--HEIFDNEKFERVIIDECAQSIEPSNLIPLG 1941
Query: 601 LSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXX-XXXXXIQYRMHPSIS 659
+ VL GD QLP + S + + +SL E Q RMH SI
Sbjct: 1942 -HYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAPVHLLNTQRRMHLSIC 2000
Query: 660 FFPNSYFYENKIHDSP-TVEKRSYEKRFL-PGPMYGPYSFINVFGGR-----EEFIEHSC 712
FPN +FY+NK+ + T E R K FL P P +FI+V G+ E S
Sbjct: 2001 VFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCR-LAFIDVSIGKPGSKFENAYGTSK 2059
Query: 713 RNMVEVSVVMKILLNLY-KGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVK 771
N+ E+ ++ +L ++ +G ++ E IGI++ Y AQ +++ + + A ++
Sbjct: 2060 FNLYEIEPLITVLKSIINEGCVSVDE---IGILTAYDAQKMKLKKAVQDAFSYEASHRIE 2116
Query: 772 VMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRN 831
+ S+DGFQG E+D+I+ S VRSN +GF+ + RR+NV LTRA+ + + G++ TL +
Sbjct: 2117 IDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKRGVILFGDQFTLAND 2176
Query: 832 RSVW 835
+ W
Sbjct: 2177 PANW 2180
Score = 58 (25.5 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 207 SLHMKGNLKI--IKELLCTDS-GATVQLIWGPPGTGKTKTVSMLL 248
S+++ NL + ++L C + + L+ GPPGTGKT ++
Sbjct: 1768 SINLPTNLPLNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAII 1812
Score = 41 (19.5 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 155 SVANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSL 208
S+ + D + + F TK+ + +K L++ L+N ++ R+ +L
Sbjct: 1605 SITSTKSDNTVYNINIRIFSAENTKKANVKYNKYRLYL--LLNIVTHERMLQAL 1656
Score = 38 (18.4 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 14 KKRAVPYDYGFTDTVFSWSLEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVFPLLEE 70
K + Y TD + + D+ ++DL K I F + + FV LL E
Sbjct: 1292 KNNLIEY-ISSTDRKNAQFIRDLISKDLNKALNMAIQFIMQYSSNAWSIFVVYLLRE 1347
Score = 38 (18.4 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 194 FLINRTSNRRIWNSLHMKGNLK 215
+++N N++ +N+L K N K
Sbjct: 71 YILNNNINKKNYNALFYKLNNK 92
Score = 37 (18.1 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 355 TYMENESMKQSEDINGDIIKEKECG---KEADA 384
T E E MK ++ DI+ K C K+ DA
Sbjct: 1565 TNEEKEWMKSTQMREDDIVLLKPCDTLLKDEDA 1597
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 166 (63.5 bits), Expect = 2.3e-18, Sum P(4) = 2.3e-18
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 770 VKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLT 829
+ + S+D FQG E+D +I+S VRSN G IGF+ + RR+NVALTRA++ L ++G+++ L
Sbjct: 1019 IMIASIDAFQGREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGDKKCLQ 1078
Query: 830 RNRSVWKALVDDAKARQCFFNAD 852
+WK + +++ + D
Sbjct: 1079 NGDKLWKEYLQYLDSKKAIHDND 1101
Score = 149 (57.5 bits), Expect = 2.3e-18, Sum P(4) = 2.3e-18
Identities = 64/230 (27%), Positives = 99/230 (43%)
Query: 576 MKPLN---FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGR 632
+K LN ++IDEA Q E + IPL L ++ VL GD+ QL S + +
Sbjct: 798 IKSLNNVRVVIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQLSCF--SLIPN---LSL 852
Query: 633 SLFEXXXXXXXXXXXXXI--QYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGP 690
SLFE + QYRMHP IS FP + FY + D R E + P
Sbjct: 853 SLFERVLLNGTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGIDANARQSEG-VISSP 911
Query: 691 MYGPYSFINVFGG-REEFIEHSCR--------NMVEVSVVMKILLNLY--KGWINSKEKL 739
+Y F + G RE+ + + R N E+ + ++L L KG + ++
Sbjct: 912 LY----FWDTKGNAREQSVRNFLREDGGYTYTNRDEIGYIQQVLRTLIITKG-VKPEQ-- 964
Query: 740 SIGIVSPYIAQVAAIQEKL-GSKYVNSAGFAVKV-MSVDGFQGGEEDIII 787
IGI++PY Q I L +N + +K + +D + + + I
Sbjct: 965 -IGIITPYSGQRDLISATLVKDDVINPSNEQMKTEVDIDDLKNDSKPVTI 1013
Score = 76 (31.8 bits), Expect = 2.3e-18, Sum P(4) = 2.3e-18
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 228 TVQLIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTPTIVAIKELASRVV 276
++ ++ GPPGTGKT T+ +++ LL + LV + +AI +A +++
Sbjct: 655 SITVLQGPPGTGKTSTIYEIILQLLDSLNTYPILVVAASNIAIDNIAEKLM 705
Score = 42 (19.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 551 KRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKE-SESTIPLQLSGIKHAVL 609
K CL + F L + K + +DE + +E S+S I QLS +++
Sbjct: 5 KYTCLTCSEQFSEAGQIQKHLSTTRHKSVRLESLDETLECEECSDSNIH-QLSIVRYG-- 61
Query: 610 FGDE---CQLPAMVESKVSDE 627
F D CQ+ ++K + E
Sbjct: 62 FNDMSLLCQICLEKDNKKTGE 82
Score = 37 (18.1 bits), Expect = 2.3e-18, Sum P(4) = 2.3e-18
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 52 SFRSVGQYFESFVFPLLEETRANLMSGMEKISN 84
++ S+ +YF+ F + E + N S + SN
Sbjct: 454 TYDSMNEYFKEISFNVFLEDQLNNESNIIDSSN 486
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 243 (90.6 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 87/283 (30%), Positives = 140/283 (49%)
Query: 584 IDEAAQLKESEST--IPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXX 641
+DEAA E+E I LS + +L GD QL +++S+ ++E G +LFE
Sbjct: 692 VDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQR 751
Query: 642 X------XXXXXXXIQ------YRMHPSISFFPNSYFYENKIHDSPTVEK--RSYEKRFL 687
+Q +R HP I N+ +YE + +E R + +L
Sbjct: 752 KCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLRTEAPMEIVCRFHNWFYL 811
Query: 688 PGPMYGPYSFINVFGG--REEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLS--IGI 743
P + P F +VFG + C N E+ VVM + +L +N ++ L IGI
Sbjct: 812 PNATF-PIMFHSVFGTTMNTKSSVSLCNNK-EIDVVMDYVKDLMYFGLNGEKLLQTDIGI 869
Query: 744 VSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFIS 803
+SPY Q IQE+L + + + SV+ FQG E+ +II+S VRS +GF++
Sbjct: 870 ISPYKNQYQRIQEQLNMRNWSQ----IDCGSVELFQGKEKHVIIVSFVRSFTP-KLGFLN 924
Query: 804 NPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
N RR+NV L+R L ++GN RTL++N S ++ +++ + R+
Sbjct: 925 NERRLNVLLSRPISLLILIGNPRTLSQN-SDFQHIIEMCRNRK 966
Score = 81 (33.6 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 24/92 (26%), Positives = 52/92 (56%)
Query: 231 LIWGPPGTGKTKTV--SMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVERDCR 288
+++GPPGTGKT T+ ++ + + + + LV + A E+A R+++ + ++ + R
Sbjct: 562 IVFGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACDEVALRLLRAIAKAPQSQPR 621
Query: 289 DALFFPLGEILLLGNNERLKVDSGVEEIYLDY 320
PL I N +R ++D+ ++++ L+Y
Sbjct: 622 -----PLTRIFS-ANCDR-RIDN-IDDLLLEY 645
Score = 47 (21.6 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 1417 QDIRSLFYKKFVLESRNNGNDGRQEKRQLSDIFN 1450
QD + +FY K E N GN+ +++K +L IF+
Sbjct: 1018 QDAK-IFYSKN--ELLNLGNECQRKKSELETIFD 1048
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 235 (87.8 bits), Expect = 2.9e-17, Sum P(4) = 2.9e-17
Identities = 83/270 (30%), Positives = 126/270 (46%)
Query: 582 LVIDEAAQLKESESTIPL--QLSGIKHAVLFGDECQLPAMVESKVSDEACFG--RSLFEX 637
L+IDE +Q E + IPL + VL GD QLP ++++ +LF+
Sbjct: 392 LIIDEVSQAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDR 451
Query: 638 XXXXX---XXXXXXXIQYRMHPSISFFPNSYFYENKIH-----------DSPTVEKRSYE 683
+QYRM+ I FP+ Y K+ D PTV+ E
Sbjct: 452 IIKIFPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPSE 511
Query: 684 K---RFLPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLS 740
+P Y E I S N E+++V + + NL N E S
Sbjct: 512 DDDDTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRS--FNVPEN-S 568
Query: 741 IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIG 800
IG++SPY AQV+ +++ + + + +++ +VDGFQG E+D+II+S VRSN +G
Sbjct: 569 IGVISPYNAQVSHLKKLIHDELKLTD---IEISTVDGFQGREKDVIILSLVRSNEKFEVG 625
Query: 801 FISNPRRVNVALTRARHCLWILGNERTLTR 830
F+ RR+NVA+TR R L ++GN L R
Sbjct: 626 FLKEERRLNVAMTRPRRQLVVVGNIEVLQR 655
Score = 87 (35.7 bits), Expect = 2.9e-17, Sum P(4) = 2.9e-17
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILL--QMKFRTLVCTPTIVAIKELASRVVKLVKESV 283
+I GPPGTGKT T+ L+ LL + R L+C P+ +++ + R+ LV ++
Sbjct: 226 IIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL 280
Score = 41 (19.5 bits), Expect = 2.9e-17, Sum P(4) = 2.9e-17
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 133 LADAKPETASDLQRVGRMWTFVSVANVTED 162
L+ K E D+Q R+ T +S+ + ++
Sbjct: 10 LSSIKHEREQDIQTTSRLLTTLSIQQLVQN 39
Score = 39 (18.8 bits), Expect = 2.9e-17, Sum P(4) = 2.9e-17
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 1615 ELKQLYVAITRTRQRLWIWENKE 1637
E ++L VA+TR R++L + N E
Sbjct: 629 EERRLNVAMTRPRRQLVVVGNIE 651
Score = 39 (18.8 bits), Expect = 8.1e-13, Sum P(3) = 8.1e-13
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 269 KELASRVVKLVKESVERD 286
KELAS+ + +K E+D
Sbjct: 3 KELASKFLSSIKHEREQD 20
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 176 (67.0 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 63/191 (32%), Positives = 91/191 (47%)
Query: 652 YRMHPSISFFPNSYFYENKIH---DSPTVEKR-SYEKRFLPGPMYGPYSFINVFGGR-EE 706
YR H ++ P+ FY ++ D V +EK LP + P F V G E
Sbjct: 337 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLIFHGVRGNEARE 393
Query: 707 FIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSA 766
S + E VM+ L + + IG+++PY QV I K+ + V+
Sbjct: 394 GRSPSWFSPAEAVQVMRYCCLLARNVSSQVSSKDIGVITPYRKQVEKI--KILLRNVDLT 451
Query: 767 GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGS------IGFISNPRRVNVALTRARHCLW 820
+KV SV+ FQG E +I+ISTVRSN +GF+SN +R NVA+TR + L
Sbjct: 452 D--IKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLI 509
Query: 821 ILGNERTLTRN 831
+LGN L R+
Sbjct: 510 VLGNPHVLVRD 520
Score = 91 (37.1 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 30/102 (29%), Positives = 51/102 (50%)
Query: 196 INRTSNRRIWNSLHMKGNLKI-IKELLCTDSGATVQLIWGPPGTGKTKTV--SMLLVILL 252
I R ++ +N + + N K+ ++ +L D +++GPPGTGKT T+ ++L V
Sbjct: 97 IPRARDKEFFNPV-LNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYA 155
Query: 253 QMKFRTLVCTPT-----IVAIKELASRVVK-LVKESVERDCR 288
R LVC P+ +V ++ S+V+K V CR
Sbjct: 156 LPDSRILVCAPSNSAADLVCLRLHESKVLKPAAMVRVNATCR 197
Score = 87 (35.7 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 535 LNLPSAVEKDLLEDLLKRFC-----LKRASLF---FSTASSSYMLHSVAMKPLNF--LVI 584
+N E+ ++E +K +C + RAS F +T SS+ + + + ++ F + +
Sbjct: 192 VNATCRFEETIIE-AIKPYCRDGEDIWRASRFRIIITTCSSAGLFYQIGVRVGYFTHVFV 250
Query: 585 DEAAQLKESESTIPLQL-SGIK-HAVLFGDECQLPAMVESKVS 625
DEA Q E E IPL L S I VL GD QL +++S+++
Sbjct: 251 DEAGQASEPECLIPLGLISDINGQIVLAGDPMQLGPVIKSRLA 293
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 229 (85.7 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 99/345 (28%), Positives = 157/345 (45%)
Query: 524 VLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF-- 581
+ K +S L L ++ + D +K + + + +T + L + + NF
Sbjct: 413 IYEKGFASVPSLLLKNSNCSKSIYDHIKASRIVKYGIIVATLCTVARLVTDTLGRYNFFT 472
Query: 582 -LVIDEAAQLKESESTIPLQLSGIK-----HAVLFGDECQLPAMVESKVSDEACFGRSLF 635
+ IDEA E E+ I + GIK H +L GD QL A+++S + RSL
Sbjct: 473 HIFIDEAGASTEPEALIGIM--GIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLM 530
Query: 636 EXXXXXXXXXXXXX------------IQYRMHPSISFFPNSYFYENKIH-DSPTVEKR-S 681
E YR HP I N +Y ++ +P ++ +
Sbjct: 531 ERLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLA 590
Query: 682 YEKRFLPGPMYGPYSFINVFG--GREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKL 739
L P + P F G RE+ S N+ E V+ + L + +E
Sbjct: 591 ANWSVLTNPQF-PIIFQATHGVTNREQNSTSSYNNL-EAEVICWYVKRLINDRVVGQE-- 646
Query: 740 SIGIVSPYIAQVAAIQEKLGSKYVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGGS 798
+GIV+PY AQ KL +K + S G+ V+V SV+ +QG E+ III S V+S +
Sbjct: 647 DVGIVAPYTAQ-----GKLVTKLLQSKGYPNVEVGSVETYQGREKTIIIASLVKSFT--N 699
Query: 799 IGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAK 843
+GF+ NPRRVNV L+RA+ L ++GN TL R+ S +K ++++ K
Sbjct: 700 MGFMCNPRRVNVLLSRAKALLILVGNPVTL-RHHSDFKFVINECK 743
Score = 78 (32.5 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 19/72 (26%), Positives = 41/72 (56%)
Query: 214 LKIIKELLCTDSGATVQLIWGPPGTGKTKTV--SMLLVILLQMKFRTLVCTPTIVAIKEL 271
L+ ++ ++ S +++GPPGTGKT T+ ++L + L Q + R LV + A +
Sbjct: 316 LEAVQRIVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSACDTI 375
Query: 272 ASRVVKLVKESV 283
A ++ + ++ ++
Sbjct: 376 ALKLCEYIESNI 387
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 215 (80.7 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 66/213 (30%), Positives = 113/213 (53%)
Query: 650 IQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVF-----GGR 704
+QYRM+ SI FP+ Y+N++ +V + S LPG + GG
Sbjct: 490 VQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVD--LPGVEINDDTMTKCIWYDTQGGE 547
Query: 705 --EEFIEH----SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEK- 757
E+ E S N +E+ VV + L + ++ IG+++PY AQV ++++
Sbjct: 548 FPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQPQD---IGVIAPYSAQVQNLKKQM 604
Query: 758 -LGSKYVNSAGF----AVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVAL 812
LG + +SA +++ +VDGFQG E+++II++ VRSN+ IGF+S RR+NVA+
Sbjct: 605 GLGGEVGSSANGDKDGQIEISTVDGFQGREKEVIILTLVRSNDSREIGFLSEQRRLNVAM 664
Query: 813 TRARHCLWILGNERTLTR--NRSV--WKALVDD 841
TR + L ++G+ + + N+ + W V+D
Sbjct: 665 TRPKRQLCVVGDLELMNQSGNKFLQSWSKFVED 697
Score = 108 (43.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 82/316 (25%), Positives = 135/316 (42%)
Query: 509 DIKYLLHKRRSECHFVLRKLLSSFNELNLPSAVEKDLL--EDLLKRFCLKRASLFFST-- 564
DI+ +L K + + RK L ++EL L ++K+L E + L +A + +T
Sbjct: 330 DIQSVLTKIKKCKKYGERKAL--YSELKL---LKKELRQRERKIVNELLVQAQVVVATLH 384
Query: 565 ASSSYML-HSVAMKP-----LNFLVIDEAAQLKESESTIPLQLSG-IKHAVLFGDECQLP 617
S SY L +SV + ++IDE +Q E + IPL LS K V+ GD QLP
Sbjct: 385 GSGSYELKNSVGTNNNEGIVFDTIIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLP 444
Query: 618 AMVESKVSDEAC----------FGRSLFEXXXXX---XXXXXXXXIQYRMHPSISFFPNS 664
++++ S+ + +LF+ +QYRM+ SI FP+
Sbjct: 445 PTIKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSM 504
Query: 665 YFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFIN-VFGGRE--EFIEHSCRNMVEVSVV 721
Y+N++ +V + S LPG + ++ + EF E ++ S
Sbjct: 505 QLYDNQLKCDDSVREISLVD--LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKY 562
Query: 722 MKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKV-MSVDGFQG 780
+ L + KG I K+ LS G+ I +A ++ G +V S +G +
Sbjct: 563 NDMELLVVKGHI--KKLLSSGVQPQDIGVIAPYSAQV-QNLKKQMGLGGEVGSSANGDKD 619
Query: 781 GEEDIIIISTVRSNNG 796
G+ I ISTV G
Sbjct: 620 GQ---IEISTVDGFQG 632
Score = 90 (36.7 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 40/133 (30%), Positives = 60/133 (45%)
Query: 149 RMWTFVSVANVTEDENEIDTSPTYFKVNATKEI-QIDVSKKSLFVIFLI---NRTSNRRI 204
RMW V + N + I T KV A KE + D+ K L I N TSN
Sbjct: 157 RMW-LVKLTNSITYKRMITTMD---KVLAMKESDKNDIHKILLGESQYIPKSNGTSNNNN 212
Query: 205 W--NSLHMKGNLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 262
N + K N + + + + + +I GPPGTGKT T+ L+ L + LVC
Sbjct: 213 GEINFFNDKLNASQRQAIDFAINDSNITIIHGPPGTGKTYTLIELIQQLTSKGEKVLVCG 272
Query: 263 PTIVAIKELASRV 275
P+ +++ + R+
Sbjct: 273 PSNISVDTILERL 285
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 1614 SELKQLYVAITRTRQRLWI 1632
SE ++L VA+TR +++L +
Sbjct: 655 SEQRRLNVAMTRPKRQLCV 673
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 215 (80.7 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 66/213 (30%), Positives = 113/213 (53%)
Query: 650 IQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVF-----GGR 704
+QYRM+ SI FP+ Y+N++ +V + S LPG + GG
Sbjct: 490 VQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVD--LPGVEINDDTMTKCIWYDTQGGE 547
Query: 705 --EEFIEH----SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEK- 757
E+ E S N +E+ VV + L + ++ IG+++PY AQV ++++
Sbjct: 548 FPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQPQD---IGVIAPYSAQVQNLKKQM 604
Query: 758 -LGSKYVNSAGF----AVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVAL 812
LG + +SA +++ +VDGFQG E+++II++ VRSN+ IGF+S RR+NVA+
Sbjct: 605 GLGGEVGSSANGDKDGQIEISTVDGFQGREKEVIILTLVRSNDSREIGFLSEQRRLNVAM 664
Query: 813 TRARHCLWILGNERTLTR--NRSV--WKALVDD 841
TR + L ++G+ + + N+ + W V+D
Sbjct: 665 TRPKRQLCVVGDLELMNQSGNKFLQSWSKFVED 697
Score = 108 (43.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 82/316 (25%), Positives = 135/316 (42%)
Query: 509 DIKYLLHKRRSECHFVLRKLLSSFNELNLPSAVEKDLL--EDLLKRFCLKRASLFFST-- 564
DI+ +L K + + RK L ++EL L ++K+L E + L +A + +T
Sbjct: 330 DIQSVLTKIKKCKKYGERKAL--YSELKL---LKKELRQRERKIVNELLVQAQVVVATLH 384
Query: 565 ASSSYML-HSVAMKP-----LNFLVIDEAAQLKESESTIPLQLSG-IKHAVLFGDECQLP 617
S SY L +SV + ++IDE +Q E + IPL LS K V+ GD QLP
Sbjct: 385 GSGSYELKNSVGTNNNEGIVFDTIIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLP 444
Query: 618 AMVESKVSDEAC----------FGRSLFEXXXXX---XXXXXXXXIQYRMHPSISFFPNS 664
++++ S+ + +LF+ +QYRM+ SI FP+
Sbjct: 445 PTIKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSM 504
Query: 665 YFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFIN-VFGGRE--EFIEHSCRNMVEVSVV 721
Y+N++ +V + S LPG + ++ + EF E ++ S
Sbjct: 505 QLYDNQLKCDDSVREISLVD--LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKY 562
Query: 722 MKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKV-MSVDGFQG 780
+ L + KG I K+ LS G+ I +A ++ G +V S +G +
Sbjct: 563 NDMELLVVKGHI--KKLLSSGVQPQDIGVIAPYSAQV-QNLKKQMGLGGEVGSSANGDKD 619
Query: 781 GEEDIIIISTVRSNNG 796
G+ I ISTV G
Sbjct: 620 GQ---IEISTVDGFQG 632
Score = 90 (36.7 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 40/133 (30%), Positives = 60/133 (45%)
Query: 149 RMWTFVSVANVTEDENEIDTSPTYFKVNATKEI-QIDVSKKSLFVIFLI---NRTSNRRI 204
RMW V + N + I T KV A KE + D+ K L I N TSN
Sbjct: 157 RMW-LVKLTNSITYKRMITTMD---KVLAMKESDKNDIHKILLGESQYIPKSNGTSNNNN 212
Query: 205 W--NSLHMKGNLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 262
N + K N + + + + + +I GPPGTGKT T+ L+ L + LVC
Sbjct: 213 GEINFFNDKLNASQRQAIDFAINDSNITIIHGPPGTGKTYTLIELIQQLTSKGEKVLVCG 272
Query: 263 PTIVAIKELASRV 275
P+ +++ + R+
Sbjct: 273 PSNISVDTILERL 285
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 1614 SELKQLYVAITRTRQRLWI 1632
SE ++L VA+TR +++L +
Sbjct: 655 SEQRRLNVAMTRPKRQLCV 673
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 187 (70.9 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 69/201 (34%), Positives = 95/201 (47%)
Query: 652 YRMHPSISFFPNSYFYENKIH---DSPTVEKR-SYEKRFLPGPMYGPYSFINVFGGR-EE 706
YR H ++ P+ FY ++ D V +EK LP + P F V G E
Sbjct: 970 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLVFHGVRGTEARE 1026
Query: 707 FIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSA 766
S N E VM+ L + + IG+++PY QV I+ L +
Sbjct: 1027 GRSPSWFNPTEAVQVMRYCCLLARSVSSQVSAGDIGVITPYRKQVEKIKILL-----RNV 1081
Query: 767 GFA-VKVMSVDGFQGGEEDIIIISTVRSNNGGS------IGFISNPRRVNVALTRARHCL 819
G A VKV SV+ FQG E +IIISTVRSN +GF+SN +R NVA+TR + L
Sbjct: 1082 GLAEVKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALL 1141
Query: 820 WILGNERTLTRNRSVWKALVD 840
+LGN L R + AL++
Sbjct: 1142 IVLGNPHVLVRQDPCFGALLE 1162
Score = 91 (37.1 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 535 LNLPSAVEKDLLEDLLKRFC-----LKRASLF---FSTASSSYMLHSVAMKPLNF--LVI 584
+N E+ +L D +K +C + RAS F +T SS+ + + + ++ +F + +
Sbjct: 825 VNATCRFEETIL-DAIKPYCRDGEDVWRASRFRVVITTCSSAGLFYQIGLRVGHFTHVFV 883
Query: 585 DEAAQLKESESTIPLQL-SGIK-HAVLFGDECQLPAMVESKVS 625
DEA Q E E IPL L S I +L GD QL +++S+++
Sbjct: 884 DEAGQASEPECLIPLGLISDIDGQIILAGDPMQLGPVIKSRLA 926
Score = 83 (34.3 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 195 LINRTSNRR--IWNSLHMKGNLKIIKELLCTDSGATVQLIWGPPGTGKTKTV--SMLLVI 250
L+ T R +N + + +K +L D +++GPPGTGKT TV ++L V
Sbjct: 727 LVTGTPRAREGFFNPMLNENQQLAVKRILSGDCRPLPYVLFGPPGTGKTVTVIEAVLQVF 786
Query: 251 LLQMKFRTLVCTPT 264
R LVC P+
Sbjct: 787 HALPDSRILVCAPS 800
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 184 (69.8 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 68/192 (35%), Positives = 93/192 (48%)
Query: 652 YRMHPSISFFPNSYFYENKIH--DSPTVEKR--SYEKRFLPGPMYGPYSFINVFGGR-EE 706
YR H ++ P+ FY ++ PTV +EK LP + P F V G E
Sbjct: 972 YRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEK--LPKKGF-PLIFHGVRGSEARE 1028
Query: 707 FIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLS-IGIVSPYIAQVAAIQEKLGSKYVNS 765
S N E V++ L I+S+ S IG+++PY QV EK+ N
Sbjct: 1029 GKSPSWFNPAEAVQVLRYCCLLAHS-ISSQVSASDIGVITPYRKQV----EKIRILLRNV 1083
Query: 766 AGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGS------IGFISNPRRVNVALTRARHCL 819
+KV SV+ FQG E +IIISTVRSN +GF+SN +R NVA+TR + L
Sbjct: 1084 DLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALL 1143
Query: 820 WILGNERTLTRN 831
+LGN L R+
Sbjct: 1144 IVLGNPHVLVRD 1155
Score = 91 (37.1 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 30/95 (31%), Positives = 53/95 (55%)
Query: 543 KDLLEDLLKRFC-----LKRASLF---FSTASSSYMLHSVAMKPLNF--LVIDEAAQLKE 592
++++ D +K +C + +AS F +T SSS + + + ++ +F + +DEA Q E
Sbjct: 834 EEIVIDAVKPYCRDGEDIWKASRFRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASE 893
Query: 593 SESTIPLQL-SGIK-HAVLFGDECQLPAMVESKVS 625
E IPL L S I VL GD QL +++S+++
Sbjct: 894 PECLIPLGLMSDISGQIVLAGDPMQLGPVIKSRLA 928
Score = 84 (34.6 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 213 NLKI-IKELLCTDSGATVQLIWGPPGTGKTKTV--SMLLVILLQMKFRTLVCTPT 264
N K+ +K +L D +++GPPGTGKT T+ ++L V R LVC P+
Sbjct: 748 NQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFALPDSRILVCAPS 802
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 169 (64.5 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 48/125 (38%), Positives = 78/125 (62%)
Query: 718 VSVVM--KILLNLYKGWINSKEKLS-IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMS 774
VS +M K+++ L +I + K S IGI++PY Q+ I + L +S G V+V +
Sbjct: 911 VSNIMEAKLVVFLTSVFIKAGCKPSDIGIIAPYRQQLKVISDLLAQ---SSVGM-VEVNT 966
Query: 775 VDGFQGGEEDIIIISTVRSNNGGSIG-FISNPRRVNVALTRARHCLWILGNERTLTRNRS 833
VD +QG ++ I+++S VRSN G++G + + RR+NVA+TRA+H L +LG +L+R
Sbjct: 967 VDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNVAITRAKHKLILLGCVPSLSRYPP 1026
Query: 834 VWKAL 838
+ K L
Sbjct: 1027 LRKLL 1031
Score = 114 (45.2 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ +
Sbjct: 748 HPIFSRKTFDFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGM 805
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKI 671
SLF+ +QYRM+ I N YE K+
Sbjct: 806 SESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKL 846
Score = 73 (30.8 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 645 LIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAK 691
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 169 (64.5 bits), Expect = 5.3e-16, Sum P(3) = 5.3e-16
Identities = 48/125 (38%), Positives = 78/125 (62%)
Query: 718 VSVVM--KILLNLYKGWINSKEKLS-IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMS 774
VS +M K+++ L +I + K S IGI++PY Q+ I + L +S G V+V +
Sbjct: 987 VSNIMEAKLVVFLTSVFIKAGCKPSDIGIIAPYRQQLKVISDLLAQ---SSVGM-VEVNT 1042
Query: 775 VDGFQGGEEDIIIISTVRSNNGGSIG-FISNPRRVNVALTRARHCLWILGNERTLTRNRS 833
VD +QG ++ I+++S VRSN G++G + + RR+NVA+TRA+H L +LG +L+R
Sbjct: 1043 VDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNVAITRAKHKLILLGCVPSLSRYPP 1102
Query: 834 VWKAL 838
+ K L
Sbjct: 1103 LRKLL 1107
Score = 114 (45.2 bits), Expect = 5.3e-16, Sum P(3) = 5.3e-16
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ +
Sbjct: 824 HPIFSRKTFDFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGM 881
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKI 671
SLF+ +QYRM+ I N YE K+
Sbjct: 882 SESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKL 922
Score = 73 (30.8 bits), Expect = 5.3e-16, Sum P(3) = 5.3e-16
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 721 LIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAK 767
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 186 (70.5 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 65/191 (34%), Positives = 90/191 (47%)
Query: 652 YRMHPSISFFPNSYFYENKIH--DSPTVEKR--SYEKRFLPGPMYGPYSFINVFGGR-EE 706
YR H ++ P+ FY ++ PTV +EK LP + P F V G E
Sbjct: 975 YRSHSALLALPSRLFYHRELEVCADPTVVASLLGWEK--LPRKGF-PLIFHGVRGNEARE 1031
Query: 707 FIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSA 766
S N E VM+ L + + IG+++PY QV EK+ N
Sbjct: 1032 GRSPSWFNPAEAVQVMRYCCMLARSVSSQVSARDIGVITPYRKQV----EKIKILLRNVD 1087
Query: 767 GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGS------IGFISNPRRVNVALTRARHCLW 820
+KV SV+ FQG E ++IISTVRSN +GF+SN +R NVA+TR + L
Sbjct: 1088 LMDIKVGSVEEFQGQEYLVVIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLI 1147
Query: 821 ILGNERTLTRN 831
+LGN L R+
Sbjct: 1148 VLGNPHVLVRD 1158
Score = 85 (35.0 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 547 EDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQL-SG 603
ED+ K R + +T SS+ + + + ++ +F + +DEA Q E E IPL L S
Sbjct: 852 EDVWKA---SRFRVLITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLVSD 908
Query: 604 IK-HAVLFGDECQLPAMVESKVS 625
+ VL GD QL +++S+++
Sbjct: 909 VSGQIVLAGDPMQLGPVIKSRLA 931
Score = 82 (33.9 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 200 SNRRIWNSLHMKGNLKI-IKELLCTDSGATVQLIWGPPGTGKTKTV--SMLLVILLQMKF 256
+ + +N + + N K+ ++ +L D +++GPPGTGKT T+ ++L V
Sbjct: 739 AREKFFNPM-LNENQKLAVRRILSGDCRPIPYVLFGPPGTGKTVTIIEAILQVFHALPDS 797
Query: 257 RTLVCTPT 264
R LVC P+
Sbjct: 798 RILVCAPS 805
Score = 48 (22.0 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 271 LASRVVKLVKESVERDCRDALFFPLGEILLLGNNERLKVDSGVEEIYL-DY 320
LA++VV DC + PLG L+ G+ RLK GV Y DY
Sbjct: 4 LAAKVVSFFWRKA--DCPEEEAGPLGPELVEGDT-RLKTVQGVVTRYCSDY 51
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 160 (61.4 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 723 KILLNLYKGWINSKEKLS-IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGG 781
K+++ L +I + K S IGI++PY Q+ I + L +S+ V+V +VD +QG
Sbjct: 497 KLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLL----FHSSIRMVEVNTVDKYQGR 552
Query: 782 EEDIIIISTVRSNNGGSIG-FISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKAL 838
++ II++S VRSN G IG + + RR+NVA+TRA+H L +LG +L R + K L
Sbjct: 553 DKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLL 610
Score = 109 (43.4 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ +
Sbjct: 327 HPIFSRKTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGM 384
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKI 671
SLF+ +QYRM+ I N Y+ K+
Sbjct: 385 SESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKL 425
Score = 73 (30.8 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 224 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAK 270
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 181 (68.8 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 65/217 (29%), Positives = 105/217 (48%)
Query: 652 YRMHPSISFFPNSYFYENKIH---DSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFI 708
YR H ++ P+ FY ++ D+ V + ++ LP + P F V G+E
Sbjct: 979 YRSHSALLALPSKLFYHKELEVCADTSVVSSLLHWEK-LPRKGF-PLIFHGV-RGKETRE 1035
Query: 709 EHSCR--NMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSA 766
HS N E VM+ +L K + IG+++PY QV I+ L S ++
Sbjct: 1036 GHSPSWFNPTEAVQVMQYCCHLAKNESIAVSVTDIGVITPYRKQVEKIKFLLRSIDLSD- 1094
Query: 767 GFAVKVMSVDGFQGGEEDIIIISTVRSNNGG------SIGFISNPRRVNVALTRARHCLW 820
+KV +V+ FQG E + I+STVRS +GF+SNP+R NVA+TRA+ L
Sbjct: 1095 ---IKVGTVEEFQGQECMVTILSTVRSYEDTFAEEEYCLGFLSNPKRFNVAITRAKALLI 1151
Query: 821 ILGNERTLTRNRSVWKALVDDAKARQCFFNADDDKDL 857
++GN L ++ + AL++ + + D +L
Sbjct: 1152 VIGNPHLLVKD-PCFCALLEYSLMNNAYIGCDLPSEL 1187
Score = 91 (37.1 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 30/101 (29%), Positives = 55/101 (54%)
Query: 546 LEDLLKRFC-----LKRASLF---FSTASSSYMLHSVAMKPLNF--LVIDEAAQLKESES 595
++D++K +C + +A F +T SS+ M + + +F +++DEA Q E ES
Sbjct: 844 IDDIVKPYCKDGDDIWKAVWFRIIITTCSSAGMFYQTGTRLGHFTHVILDEAGQASEPES 903
Query: 596 TIPLQL-SGIK-HAVLFGDECQLPAMVESKVSDEACFGRSL 634
IP+ L S + VL GD QL +++S+++ FG ++
Sbjct: 904 LIPIGLISEVNGQIVLVGDPKQLGPLIKSRIA--VAFGLNI 942
Score = 86 (35.3 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 205 WNSLHMKGNLKIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKF-----RTL 259
+N + K +K +L + T +++GPPGTGKT TV + +LQ+ F R L
Sbjct: 748 FNPMLNKQQKLAVKRILSGECRPTPYILFGPPGTGKTITV---VEAILQIHFTLPDSRIL 804
Query: 260 VCTPTIVAIKELASRV 275
VC P+ A + R+
Sbjct: 805 VCAPSNAATDLICLRL 820
Score = 42 (19.8 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 7/33 (21%), Positives = 21/33 (63%)
Query: 171 TYFKVNATKEIQIDVSKKSLFVIFLINRTSNRR 203
+Y K+++ ++ D+S K++ +F + + N++
Sbjct: 678 SYCKISSNEDEPSDISAKTVDTVF-VRKLQNKQ 709
Score = 37 (18.1 bits), Expect = 6.2e-15, Sum P(4) = 6.2e-15
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 159 VTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVI 193
++E+E D + T+EI I K+ VI
Sbjct: 318 ISEEEQREDVQQPIDDTDITEEIVIPPGGKTFVVI 352
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 238 (88.8 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 86/297 (28%), Positives = 137/297 (46%)
Query: 577 KPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFE 636
K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ + SLF+
Sbjct: 754 KTFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHKQLPPLVLNREARALGMSESLFK 811
Query: 637 XXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIH---DS--------PTVEK------ 679
IQYRM+ I N YE K+ D P ++
Sbjct: 812 RLERNESAVVQLTIQYRMNRKIMSLSNKLTYEGKLECGSDRVANAVITLPNLKDVRLEFY 871
Query: 680 RSY-EKRFLPGPMY--GPYSFINV--FGGREEFIEHSCRNMVEVSVVMKILLNLYKGWIN 734
Y + +L G P F+N E+ N+ E +++ + K +
Sbjct: 872 ADYSDNPWLAGVFEPDNPVCFLNTDKVPAPEQIENGGVSNVTEARLIVFLTSTFIKAGCS 931
Query: 735 SKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSN 794
+ IGI++PY Q+ I + L +S G V+V +VD +QG ++ +I++S VRSN
Sbjct: 932 PSD---IGIIAPYRQQLRTITDLLAR---SSVGM-VEVNTVDKYQGRDKSLILVSFVRSN 984
Query: 795 NGGSIG-FISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFN 850
G++G + + RR+NVA+TRA+H L +LG+ +L R + K L D A Q N
Sbjct: 985 EDGTLGELLKDWRRLNVAITRAKHKLILLGSVSSLKRFPPLEK-LFDHLNAEQLISN 1040
Score = 72 (30.4 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 645 LIVGMPGTGKTTTICALVRILSACGFSVLLTSYTHSAVDNILLKLAK 691
Score = 37 (18.1 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 38 NEDLFKDKVKRIPFSFRSVGQY--FESFVFPL-LEETRANLMSGMEKISNAPFAQVVAFE 94
N D K +++ + F+ Q+ + S V P ++T AN++ G+ K +V+ +
Sbjct: 584 NTDSSK-RLRELIIDFKEP-QFIAYLSSVLPHDAKDTVANILKGLNKPQRQAMKKVLLSK 641
Query: 95 D 95
D
Sbjct: 642 D 642
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 222 (83.2 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 72/201 (35%), Positives = 102/201 (50%)
Query: 652 YRMHPSISFFPNSYFYENKIHD-SPTVEKRSY-EKRFLPGPMYGPYSFINVFGGRE-EFI 708
YR HPSI PN FY+N++ + + R Y LP + P F V G E E
Sbjct: 754 YRSHPSILKVPNELFYDNELKACADEISSRQYCTWEHLPKRGF-PVIFHGVVGKDEREST 812
Query: 709 EHSCRNMVEVSVVM----KILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQE--KLGSKY 762
S N E+ +M K+LL K I IGI++PY QV I++ K+ +
Sbjct: 813 SPSFFNTSEIDKIMDYLKKLLLTQAKKGIAKISPKDIGIIAPYRKQVEKIRQAIKIHREL 872
Query: 763 VNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGG-------SIGFISNPRRVNVALTR 814
+ +G +KV SV+ FQG E +II+STVRS+ +IGF+ N +R NVA+TR
Sbjct: 873 KSLSGIEELKVGSVEEFQGQERKVIIVSTVRSSKEHIILDDKFNIGFLKNEKRFNVAVTR 932
Query: 815 ARHCLWILGNERTLTRNRSVW 835
A+ L ++GN L R +W
Sbjct: 933 AKALLIMVGNPIIL-RTDEIW 952
Score = 70 (29.7 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMK--FRTLVCTPTIVAIKELASRVV 276
L++GPPGTGKT T+ + + + R L C P+ A +L +++
Sbjct: 547 LVFGPPGTGKTVTIVEAIKQVEKNTGGARILACAPSNSAADQLGEKLI 594
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 242 (90.2 bits), Expect = 5.5e-15, Sum P(3) = 5.5e-15
Identities = 92/317 (29%), Positives = 149/317 (47%)
Query: 551 KRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPL-QLSGIKHAVL 609
++F L R + T S + S+ + + +++DEA E E+ IPL Q + VL
Sbjct: 2327 RKFELDRHEVILCTCSCAASA-SLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVL 2385
Query: 610 FGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYEN 669
GD QL +V+++ RSLFE QYRMH I FP+ FY++
Sbjct: 2386 LGDHKQLRPVVKNERLQNLGLDRSLFERYHEDAHMLDT---QYRMHEGICAFPSVAFYKS 2442
Query: 670 KIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFI-------EHSCRNMVEVSVVM 722
K+ + +R G P F +V G + E+S N+ EV+ V+
Sbjct: 2443 KLKTWQGL-RRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVV 2501
Query: 723 KILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGE 782
+I L G + E I +++PY AQ + I + L + + AG AV S+ QG E
Sbjct: 2502 RITKQLTLG--RTVEPQDIAVLTPYNAQASEISKALRREGI--AGVAVS--SITKSQGSE 2555
Query: 783 EDIIIISTVRSNNGGSI-------------GFISNPRRVNVALTRARHCLWILGNERTLT 829
+++STVR+ + GF+ +P +VNVA+TRA+ L ++G + L
Sbjct: 2556 WRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIG-DHLLL 2614
Query: 830 RNRSVWKALVDDAKARQ 846
R +W++L+D +A+Q
Sbjct: 2615 RCCPLWRSLLDFCEAQQ 2631
Score = 143 (55.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 73/290 (25%), Positives = 134/290 (46%)
Query: 555 LKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGI-KHAVLFGDE 613
L R + +T S + L V + + ++IDEAAQ+ E E+ PL + VL GD
Sbjct: 638 LARHRVVVTTTSQARELR-VPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDH 696
Query: 614 CQL-P---AMVESKVSDEACFGRSLF-----EXXXXXXXXXXXXXIQYRMHPSISFFPNS 664
Q+ P ++ ++ ++ R LF E YR +I F +
Sbjct: 697 MQVTPRLFSVARARAAEHTLLHR-LFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISR 755
Query: 665 YFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIEH-SCRNMVEVSVVMK 723
+FY K +P + R + P P + P F +V G + + S N+ E++ V++
Sbjct: 756 HFYVAK--GNP-IHARG---KVPPHPRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVE 809
Query: 724 ILLNLYKGWIN---SKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQG 780
+ Y W + +E+ I +VS + AQV+A++++L + + V V S + G
Sbjct: 810 KVQEAYNTWPSCWGGREQRCICVVS-HGAQVSALRQELRRRDLGQ----VSVGSFEILPG 864
Query: 781 GEEDIIIISTVRSNNG----GSIG--FISNPRRVNVALTRARHCLWILGN 824
+ ++++STV + G++ F ++ R +N LTRA+ L ++G+
Sbjct: 865 RQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGD 914
Score = 75 (31.5 bits), Expect = 5.5e-15, Sum P(3) = 5.5e-15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 231 LIWGPPGTGKTKTVSML-LVILLQMKFRTLVCTPT 264
LI+GP GTGKT T++M L ++ + + + L+CT T
Sbjct: 541 LIYGPFGTGKTYTLAMASLEVIRRPETKVLICTHT 575
Score = 50 (22.7 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 231 LIWGPPGTGKT 241
+I GPPGTGKT
Sbjct: 2171 VIQGPPGTGKT 2181
Score = 42 (19.8 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 2144 NLASINVHQLVSAGRNYWSSELFSVGTKV 2172
+L SI +H + N +SSE+ + T++
Sbjct: 2277 SLRSITLHHRIRQAPNPYSSEIKAFDTRL 2305
Score = 40 (19.1 bits), Expect = 5.5e-15, Sum P(3) = 5.5e-15
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 325 LADCFAPLTGWSHCFASMVEFLDNCVSQYHTYMENESMKQSE 366
+ D A L + C F+ CV ++ E SM+Q E
Sbjct: 912 VGDAVA-LCSFGACGKLWESFIRECVERHSVCPEGLSMEQVE 952
Score = 40 (19.1 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 1783 CEEPELEKAGECFSLAGCYKLAADVY 1808
C E +E+ G+CFS Y+ D Y
Sbjct: 1912 CLE-HVERPGDCFS-GRVYRAPRDRY 1935
Score = 39 (18.8 bits), Expect = 0.00059, Sum P(4) = 0.00059
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 1084 TFILGRSGTGKTTV 1097
T I G GTGKT V
Sbjct: 2170 TVIQGPPGTGKTIV 2183
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 2138 HALRSGNLASINVHQLVSAGRNYWSSELFSV 2168
++LR G L + + +L + R+ S LF V
Sbjct: 1240 YSLRKGRLQRVGLERLTAEARH---SRLFWV 1267
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 239 (89.2 bits), Expect = 7.7e-15, Sum P(3) = 7.7e-15
Identities = 95/322 (29%), Positives = 151/322 (46%)
Query: 551 KRFCLKRASLFFSTASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPL-QLSGIKHA 607
++F L + + T S + S +++ L+ ++IDEA E E+ IPL S +
Sbjct: 2597 RKFELDQHRVILCTCSCAA---SASLRKLDVRQILIDEAGMATEPETLIPLVAFSKAEKV 2653
Query: 608 VLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFY 667
VL GD QL +V+++ RSLFE QYRMH I FP+ FY
Sbjct: 2654 VLLGDHKQLRPVVKNEQLQNLGLDRSLFERYHVDAHMLDT---QYRMHEGICAFPSMEFY 2710
Query: 668 ENKIHD------SPTV----EKRSYEKRFLPGPMYGPYSFINVFGGREEFIEHSCRNMVE 717
E K+ P++ K S F G + G + V +E E+S N E
Sbjct: 2711 EKKLKTWQGLRRPPSILGHIGKESCSVIF--GHVQGHEQSLLV--STDEGNENSKANPEE 2766
Query: 718 VSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDG 777
V+ V++I L G + E + I++PY AQ A I ++L + V+ V V S+
Sbjct: 2767 VAAVVRIAKQLTLG--RTVEPKDVAILTPYNAQAAEISKRLVREGVSG----VTVCSITK 2820
Query: 778 FQGGEEDIIIISTVRSNNGGSI-------------GFISNPRRVNVALTRARHCLWILGN 824
QG E +++STVR+ + GF+ +P +VNVA+TRAR L ++G+
Sbjct: 2821 SQGSEWRYVLVSTVRTCQESDLDQRPTKSWLKRFLGFVVDPNQVNVAITRAREGLCVIGD 2880
Query: 825 ERTLTRNRSVWKALVDDAKARQ 846
R L+ +W+ +D +A++
Sbjct: 2881 HRLLSCC-PLWRRFLDFCEAQR 2901
Score = 171 (65.3 bits), Expect = 8.3e-07, Sum P(4) = 8.3e-07
Identities = 80/308 (25%), Positives = 140/308 (45%)
Query: 555 LKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGI-KHAVLFGDE 613
L++ + +T S + L V + ++IDEAAQ+ E E+ PL+ + VL GD
Sbjct: 885 LEQHRIVVTTTSQARELR-VPAGFFSHILIDEAAQMLECEALTPLRYAAPGTRVVLAGDH 943
Query: 614 CQLPAMVESKVSDEACFGRSLF---------EXXXXXXXXXXXXXIQYRMHPSISFFPNS 664
Q+ + S +A G +L E YR +I F +
Sbjct: 944 MQVTPRLFSVPRAQAA-GHTLLYRLFQHYQREAHEVAQRSRLIFHQNYRSTEAILSFVSR 1002
Query: 665 YFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIEH-SCRNMVEVSVVMK 723
+FY K SP R P P P F +V G E + S N EV+ V++
Sbjct: 1003 HFYVAK--GSPI----HASGRVPPHPRLHPLMFCHVAGNPERDLSSTSWLNAAEVAQVVE 1056
Query: 724 ILLNLYKGWIN---SKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQG 780
+ +L+ GW + ++E+ I +VS + AQV A++++L + + V V S + G
Sbjct: 1057 QVRDLHDGWPSCWGAREQKHICVVS-HGAQVTALRQELRKRNLGQ----VSVGSFEILPG 1111
Query: 781 GEEDIIIISTVRSNNG------GSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRS- 833
E ++++STV +++ S+GF ++ R +N +TRA+ + +GN L + +
Sbjct: 1112 REFRVVVLSTVHNHHSLLSSGTASLGFFTDARVLNTIMTRAQSQVVAVGNALALCSSGAC 1171
Query: 834 --VWKALV 839
+WK+ +
Sbjct: 1172 SKLWKSFI 1179
Score = 77 (32.2 bits), Expect = 7.7e-15, Sum P(3) = 7.7e-15
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 231 LIWGPPGTGKTKTVSML-LVILLQMKFRTLVCTPT 264
LI+GP GTGKT T++M L ++ Q + L+CT T
Sbjct: 788 LIYGPFGTGKTYTLAMASLEVIRQPHTKVLICTHT 822
Score = 50 (22.7 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 231 LIWGPPGTGKT 241
+I GPPGTGKT
Sbjct: 2441 VIQGPPGTGKT 2451
Score = 45 (20.9 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 89 QVVAFE--DSKPYGSMLYDVKVDCWRNRF 115
Q V +E ++ GS L+ V++ WR RF
Sbjct: 1483 QRVGYERLTAEARGSRLFWVRIVLWRQRF 1511
Score = 41 (19.5 bits), Expect = 7.7e-15, Sum P(3) = 7.7e-15
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 92 AFED---SKPYGSMLYDVKVDCWRNRFSNLGREPYKTLP-------GDILVLADAKPETA 141
AFE+ S + M+ + +CW +R G ++ P GDI A ++ E
Sbjct: 301 AFENHCSSLEHAQMVVLDQEECWEHRSPPTGLSTFELCPNPSLCEYGDICTKAHSEQELQ 360
Query: 142 SDLQRV 147
+RV
Sbjct: 361 EWTRRV 366
Score = 41 (19.5 bits), Expect = 8.3e-07, Sum P(4) = 8.3e-07
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1084 TFILGRSGTGKTTVLIMKLF 1103
T I G GTGKT V +F
Sbjct: 2440 TVIQGPPGTGKTVVAFHIVF 2459
Score = 37 (18.1 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 1810 RGSFLAECLDVCSKGKLFDIGLQYI 1834
RG FLA L +C+ F + L+++
Sbjct: 2127 RG-FLAPSLQLCTVAPGFTLCLEHV 2150
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 160 (61.4 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 723 KILLNLYKGWINSKEKLS-IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGG 781
K+++ L +I + K S IGI++PY Q+ I + L +S+ V+V +VD +QG
Sbjct: 886 KLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLL----FHSSIRMVEVNTVDKYQGR 941
Query: 782 EEDIIIISTVRSNNGGSIG-FISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKAL 838
++ II++S VRSN G IG + + RR+NVA+TRA+H L +LG +L R + K L
Sbjct: 942 DKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLL 999
Score = 109 (43.4 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ +
Sbjct: 716 HPIFSRKTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGM 773
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKI 671
SLF+ +QYRM+ I N Y+ K+
Sbjct: 774 SESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKL 814
Score = 73 (30.8 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 613 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAK 659
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 233 (87.1 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 96/306 (31%), Positives = 142/306 (46%)
Query: 575 AMKPLNF--LVIDEAAQLKESESTIPLQLSGIKHA---VLFGDECQLPAMVESKVSDEAC 629
+++ LN ++IDE A E E+ IPL +S KHA VL GD QL +V +
Sbjct: 2264 SLEKLNVKQILIDECAMSTEPETLIPL-VSH-KHAEKVVLLGDHKQLKPVVNNDFCKSLG 2321
Query: 630 FGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPT---VEKRSYEK-- 684
SLFE QYRMH +I FP+ FYE+++ P + Y K
Sbjct: 2322 METSLFERYQKQAWMLDT---QYRMHKNICEFPSQEFYEHRLKTCPQLLRIPSVLYHKNN 2378
Query: 685 RFLP---GPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNL-YKGWINSKEKLS 740
R P G + G + + EE E+S N EV ++ L G I + S
Sbjct: 2379 RCCPIIFGHVEGKEQSLVI--STEEGNENSKANPEEVEQAVRTAKQLTLDGTIRPQ---S 2433
Query: 741 IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSI- 799
I I+SPY AQV+ I ++L + + V V ++ QG E +I+STVRS + I
Sbjct: 2434 IAILSPYNAQVSEINKRLLKEGIRG----VTVCTIMKSQGSEWRYVILSTVRSCSRHEID 2489
Query: 800 ------------GFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQC 847
GF+++P +VNVA+TRA+ L I+GN L N +W+ L+ C
Sbjct: 2490 KKPTKSWQKKHLGFVTDPNQVNVAITRAQEGLCIIGNRYLLECN-PLWRRLLQHYIDHNC 2548
Query: 848 FFNADD 853
+ + +
Sbjct: 2549 YTSGQE 2554
Score = 146 (56.5 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 77/307 (25%), Positives = 132/307 (42%)
Query: 560 LFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIK-HAVLFGDECQLPA 618
+ +T+ S L VA ++IDEAAQ+ E E+ IPL + + VL GD Q+
Sbjct: 640 IIITTSMLSKHL-KVAPGYFTHIMIDEAAQMLECEALIPLSYATFETRIVLAGDHMQITP 698
Query: 619 MVESKVSDEACFG---RSLF-----EXXXXXXXXXXXXXIQYRMHPSISFFPNSYFY--- 667
+ ++ + LF E YR I F + +FY
Sbjct: 699 KLFCVADGQSAYHTLLNRLFQFYQKEKHEVAMKSRIIFNENYRSTAGIIEFVSKHFYIGK 758
Query: 668 ENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIEH-SCRNMVEVSVVMKILL 726
N IH S + P P P F +V G E + S N E++ V++ +
Sbjct: 759 GNAIHASGNIP---------PHPEIYPLMFCHVPGVAERDMSMISWHNASEITQVVEKVE 809
Query: 727 NLYKGWIN---SKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEE 783
+Y+ W + ++++ I +VS + QV+AI+++L K + V V + + G E
Sbjct: 810 EIYQRWPHEWGAQDQKRICVVSHGV-QVSAIRQELRKKQLPE----VVVENYENLPGREF 864
Query: 784 DIIIISTVRSNNGGSIG------FISNPRRVNVALTRARHCLWILGNERTLTRN---RSV 834
+IIISTV ++ + F + R +N +TRA+ + ++G+ L + V
Sbjct: 865 RVIIISTVHTSESLRVSASHNHEFFNEARVLNTIMTRAQSQVIVVGDAVALCSHGQCSKV 924
Query: 835 WKALVDD 841
WK + +
Sbjct: 925 WKRFIQE 931
Score = 80 (33.2 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 231 LIWGPPGTGKTKTVSML-LVILLQMKFRTLVCTPT 264
LI+GP GTGKT T++M L ++ Q R L+CT T
Sbjct: 538 LIYGPFGTGKTFTLAMATLEVIRQPNTRVLICTHT 572
Score = 53 (23.7 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 10/11 (90%), Positives = 10/11 (90%)
Query: 231 LIWGPPGTGKT 241
LI GPPGTGKT
Sbjct: 2086 LIQGPPGTGKT 2096
Score = 49 (22.3 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 2216 QYHAKVLQKF---ID-QSTEHLFDFIFPLEWRESLNE-NMISLKGTKL 2258
Q +V+QK +D + T+ F +FPL RESL + ++I+ + +L
Sbjct: 1652 QLKGQVMQKIAFVVDIEGTDRYFKALFPLN-RESLPDPHVINYRALQL 1698
Score = 41 (19.5 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 179 KEIQIDVSKKSLFVIFLINRTSNRR 203
+E QI SK+ L + F+ + ++RR
Sbjct: 508 QEPQIGNSKQKLAISFIAGQATSRR 532
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 160 (61.4 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 723 KILLNLYKGWINSKEKLS-IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGG 781
K+++ L +I + K S IGI++PY Q+ I + L +S+ V+V +VD +QG
Sbjct: 917 KLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLL----FHSSIRMVEVNTVDKYQGR 972
Query: 782 EEDIIIISTVRSNNGGSIG-FISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKAL 838
++ II++S VRSN G IG + + RR+NVA+TRA+H L +LG +L R + K L
Sbjct: 973 DKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLL 1030
Score = 109 (43.4 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ +
Sbjct: 747 HPIFSRKTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGM 804
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKI 671
SLF+ +QYRM+ I N Y+ K+
Sbjct: 805 SESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKL 845
Score = 73 (30.8 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 644 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAK 690
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 177 (67.4 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 64/191 (33%), Positives = 91/191 (47%)
Query: 652 YRMHPSISFFPNSYFYENKIH---DSPTVEKR-SYEKRFLPGPMYGPYSFINVFGGR-EE 706
YR H ++ P+ FY ++ D V +EK LP + P F V G E
Sbjct: 974 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLIFHGVRGNEARE 1030
Query: 707 FIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSA 766
S + E VM+ L + + IG+++PY QV I K+ + V+
Sbjct: 1031 GRSPSWFSPAEAVQVMRYCCLLARSVSSQVSSKDIGVITPYRKQVEKI--KILLRNVDLT 1088
Query: 767 GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGS------IGFISNPRRVNVALTRARHCLW 820
+KV SV+ FQG E +I+ISTVRSN +GF+SN +R NVA+TR + L
Sbjct: 1089 D--IKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLI 1146
Query: 821 ILGNERTLTRN 831
ILGN L R+
Sbjct: 1147 ILGNPHVLVRD 1157
Score = 88 (36.0 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 535 LNLPSAVEKDLLEDLLKRFC-----LKRASLF---FSTASSSYMLHSVAMKPLNF--LVI 584
+N E+ ++ D +K +C + RAS F +T SS+ + + + ++ F + +
Sbjct: 829 VNATCRFEETII-DAIKPYCRDGEDIWRASRFRIIITTCSSAGLFYQIGVRVGYFTHVFV 887
Query: 585 DEAAQLKESESTIPLQL-SGIK-HAVLFGDECQLPAMVESKVS 625
DEA Q E E IPL L S I VL GD QL +++S+++
Sbjct: 888 DEAGQASEPECLIPLGLISDINGQIVLAGDPMQLGPVIKSRLA 930
Score = 88 (36.0 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 35/138 (25%), Positives = 63/138 (45%)
Query: 160 TEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHMKGNLKI-IK 218
T +E + T+ K ++T E ++ I + ++ +N + + N K+ ++
Sbjct: 707 TTEERHVGTTDQPEKASSTAETMDEIQ---------IPKARDKEFFNPV-LNENQKLAVR 756
Query: 219 ELLCTDSGATVQLIWGPPGTGKTKTV--SMLLVILLQMKFRTLVCTPT-----IVAIKEL 271
+L D +++GPPGTGKT T+ ++L V R LVC P+ +V ++
Sbjct: 757 RILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCAPSNSAADLVCLRLH 816
Query: 272 ASRVVK-LVKESVERDCR 288
S+V K V CR
Sbjct: 817 ESKVPKPAAMVRVNATCR 834
Score = 59 (25.8 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 35/161 (21%), Positives = 65/161 (40%)
Query: 233 WGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVERDCRDALF 292
W P + +T + V++ K + P+ + + R+ K V++ + D L
Sbjct: 402 WKKPKSSQTLVSAKTTVVVTTQKRNSRRQLPSFLPQYPIPDRLKKCVEQKI-----DILT 456
Query: 293 F-PL-GEILLLGN-NERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVEFLDNC 349
F PL E+L + N E+ +EEI+ + +K L V L
Sbjct: 457 FQPLLAELLNMSNYKEKFSTLLWLEEIHAEIELKEYNMSRVVLKRKGDLLVLEVPGLAE- 515
Query: 350 VSQYHTYMENESMKQSEDINGDIIKEKECGKEADASDVEIK 390
S+ Y ++ + +S++ NG +I+ E DV +K
Sbjct: 516 -SRPSLYAGDKLILKSQEYNGHVIEYIGYVMEIHEEDVTLK 555
Score = 37 (18.1 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 97 KPYGSMLYDVKVDCWRNRFSNLG 119
+PYG++L K D R ++ G
Sbjct: 206 EPYGALLLKNKGDIEVTRMTSFG 228
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 244 (91.0 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 91/319 (28%), Positives = 153/319 (47%)
Query: 551 KRFCLKRASLFFSTASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPL-QLSGIKHA 607
++F + R + T S + S +++ +N +++DEA E E+ IPL S ++
Sbjct: 2559 RKFEVDRHRVLLCTCSCAA---SASLRDVNIRQILVDEAGLASEPETLIPLVSFSQVEKV 2615
Query: 608 VLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFY 667
VL GD QL +V+S+ RSL + +QY +H SI FP+ FY
Sbjct: 2616 VLLGDHKQLRPVVKSEQLQNLGLDRSLLQRYRRDASMLD---LQYCVHESICAFPSMEFY 2672
Query: 668 ENKIHD------SPTVEKRSYEK-RFLPGPMYGPYSFINVFGGREEFIEHSCRNMVEVSV 720
+ K+ P++ E + G + P + V EE E+S N + ++
Sbjct: 2673 KKKLKTWQGLRLPPSILGYGKENCSVIFGDVQSPEESLVV--STEEGRENSKVNKEQAAL 2730
Query: 721 VMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQG 780
V+ + L G ++ K+ + I++PY AQV I ++L V AG V V S+ QG
Sbjct: 2731 VVCLAKQLVSGRVDPKD---MAILTPYHAQVLEISKRLEEARV--AG--VTVCSITKSQG 2783
Query: 781 GEEDIIIISTVRSNNGG-------------SIGFISNPRRVNVALTRARHCLWILGNERT 827
+ +++STVR+ S+GF+ +P +VNVALTRA+ LW++G +R
Sbjct: 2784 RQWRYVLVSTVRTCQESDLDLRPTKSWLQKSLGFLVDPNQVNVALTRAQEGLWVVG-DRL 2842
Query: 828 LTRNRSVWKALVDDAKARQ 846
L R +W +D +A++
Sbjct: 2843 LLRCCPLWSRFLDFCEAQK 2861
Score = 66 (28.3 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 231 LIWGPPGTGKTKTVSML-LVILLQMKFRTLVCTPT 264
L+ GP GTGKT ++M L ++ Q + L+CT T
Sbjct: 785 LVCGPFGTGKTYALAMASLEVIRQPGTKVLICTHT 819
Score = 50 (22.7 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 231 LIWGPPGTGKT 241
+I GPPGTGKT
Sbjct: 2403 VIHGPPGTGKT 2413
Score = 42 (19.8 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 288 RDALFFPLGEILLLGNNERLKVDSGVEEIYLDYRVK 323
R+ ++PLG IL + E + G+ + L+Y +K
Sbjct: 1459 RERFYYPLGVILKV-LPEATTWEQGLRILRLEYGLK 1493
Score = 38 (18.4 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 142 SDLQRVGRMWTFVSVANVTED 162
+D+Q MW S+ +V ED
Sbjct: 2249 ADMQEAP-MWVHFSIHHVAED 2268
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 168 (64.2 bits), Expect = 3.2e-14, Sum P(4) = 3.2e-14
Identities = 45/140 (32%), Positives = 77/140 (55%)
Query: 694 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQV 751
P F+N E+ N+ E +++ + K + + IG+++PY Q+
Sbjct: 892 PVCFLNTDKVPAPEQVENGGVSNVTEARLIVFLTSTFIKAGCSPSD---IGVIAPYRQQL 948
Query: 752 AAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIG-FISNPRRVNV 810
I + L +S G V+V +VD +QG ++ +I++S VRSN G++G + + RR+NV
Sbjct: 949 RIISDLLAR---SSVGM-VEVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNV 1004
Query: 811 ALTRARHCLWILGNERTLTR 830
ALTRA+H L +LG+ +L R
Sbjct: 1005 ALTRAKHKLILLGSVSSLKR 1024
Score = 109 (43.4 bits), Expect = 3.2e-14, Sum P(4) = 3.2e-14
Identities = 29/101 (28%), Positives = 46/101 (45%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ +
Sbjct: 749 HPIFSRKTFDFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVVNREARALGM 806
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKI 671
SLF+ +QYRM+ I N Y K+
Sbjct: 807 SESLFKRLERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKL 847
Score = 72 (30.4 bits), Expect = 3.2e-14, Sum P(4) = 3.2e-14
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 646 LIVGMPGTGKTTTICALVRILSACGFSVLLTSYTHSAVDNILLKLAK 692
Score = 39 (18.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 556 KRASLFFSTASSSYMLHSVAMK-PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLF---- 610
KR L ++ +LH V+ P + Q+ E E T S I + L+
Sbjct: 352 KRELLKLRNWLAASLLHRVSRAAPGEEARLSALPQIIEEEKTCKY-CSQIGNCALYSRAV 410
Query: 611 ---GDECQLPAMVESKVSDE 627
GD+ +P + SK+ +E
Sbjct: 411 EEQGDDASIPEAMLSKIQEE 430
Score = 38 (18.4 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 584 IDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSD 626
I EA K E T LQL+ +K+ L+ C L +ES+ D
Sbjct: 419 IPEAMLSKIQEETRHLQLAHLKYFSLW---C-LMLTLESQSKD 457
Score = 37 (18.1 bits), Expect = 3.2e-14, Sum P(4) = 3.2e-14
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 45 KVKRIPFSFRSVGQY--FESFVFPL-LEETRANLMSGMEKISNAPFAQVVAFED 95
+++ + FR Q+ + S V P ++T AN++ G+ K +V+ +D
Sbjct: 591 RLRELIIDFREP-QFIAYLSSVLPHDAKDTVANILKGLNKPQRQAMKRVLLSKD 643
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 223 (83.6 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 101/346 (29%), Positives = 148/346 (42%)
Query: 534 ELNLPSAVEKDLLEDLLKRFC---LKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQL 590
E NL S + D LLK+ +++ + T SS+ + ++IDE A
Sbjct: 153 EKNL-SVDQIDNYRKLLKKANQHEIEKYDVVLCTCSSALKPELREVMDFRQILIDECAMA 211
Query: 591 KESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXI 650
E E+ IPL + VL GD Q+ +V+ +SLFE
Sbjct: 212 TEPEAFIPLVSHNPQQIVLLGDHQQIRPIVQCGHVKNKGMEKSLFERYMDLANMLDT--- 268
Query: 651 QYRMHPSISFFPNSYFYENKIHDS----PT--VEKRSYEKRFLPGPMYGPYSFINVFGGR 704
QYRMH I FP+ FY+ K+ P + K L G + G +++
Sbjct: 269 QYRMHAEICSFPSDEFYDGKLKTGAERGPCCLLNKSKEPTAMLFGHIEGKE--VSLVVST 326
Query: 705 EEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVN 764
E+ E+S N E + + L K S E I I++PY AQV+ I+ L K V
Sbjct: 327 EKGNENSMANTEEAEQAVCVADLLIKQSGVSPEH--IAILTPYNAQVSEIKMTLEKKNVR 384
Query: 765 SAGFAVKVMSVDGFQGGEEDIIIISTVRSNN----------------GGSIGFISNPRRV 808
+ V V +V QG E +I+STVRS + G +GF+++ +V
Sbjct: 385 N----VTVCTVMKSQGSEWPYVIVSTVRSCSTSDIQAYRVRPHKAWLGKRLGFVTDANQV 440
Query: 809 NVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNADDD 854
NVA+TRA+ L ILGN L R +W L+D + C N D
Sbjct: 441 NVAITRAQDGLCILGNS-DLLRCCELWDRLLDHYYRKSCVVNPASD 485
Score = 50 (22.7 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 231 LIWGPPGTGKT 241
+I GPPGTGKT
Sbjct: 19 VIQGPPGTGKT 29
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 208 (78.3 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 78/270 (28%), Positives = 128/270 (47%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ +
Sbjct: 720 HPIFSRKTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGM 777
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGP 690
SLF+ +QYRM+ I N Y+ K+ +K + LP
Sbjct: 778 SESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGS--DKVANAVVNLPN- 834
Query: 691 MYGPYSFINVFGGREEFIEHSCR-NMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIA 749
+ + + ++ E+ E + + LN K + IGI++PY
Sbjct: 835 LKDVKLELEFYA---DYSENPWMIGAFEPNNPV-CFLNTDKAGCKPSD---IGIIAPYRQ 887
Query: 750 QVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIG-FISNPRRV 808
Q+ I + L +S+ V+V +VD +QG ++ II++S VRSN G IG + + RR+
Sbjct: 888 QLKIINDLL----FHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRL 943
Query: 809 NVALTRARHCLWILGNERTLTRNRSVWKAL 838
NVA+TRA+H L +LG +L R + K L
Sbjct: 944 NVAITRAKHKLILLGCVPSLNRYPPLGKLL 973
Score = 73 (30.8 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 617 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAK 663
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 234 (87.4 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 98/325 (30%), Positives = 147/325 (45%)
Query: 551 KRFCLKRASLFFSTASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQ-LSGIKHA 607
+++ L+R S+ T S + S ++K LN ++IDEA E E+ IPL S +
Sbjct: 2622 RKYELERHSVILCTCSCAA---SGSLKALNVRQILIDEAGMATEPETLIPLVCFSKTEKV 2678
Query: 608 VLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFY 667
VL GD QL +V+++ RSLFE QYRMH I FP+ FY
Sbjct: 2679 VLLGDHKQLRPVVKNEQLRNLGMDRSLFERYHRDAIMLDT---QYRMHKDICSFPSMEFY 2735
Query: 668 ENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFG-------GREEFIEHSCRNMVEVSV 720
K+ + KR G P F +V G EE E+S N EV+
Sbjct: 2736 GGKLKTWSDL-KRPPSLLGHVGKQSCPVIFGSVQGYEQKLLVSTEEGNENSRANPEEVTE 2794
Query: 721 VMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQG 780
V++I+ L + + + +++PY AQ AAI L + V V V S+ QG
Sbjct: 2795 VVRIIKQLTLD--RTVDPKDVAVLTPYNAQAAAISRGLMQRGVTG----VTVTSITKSQG 2848
Query: 781 GEEDIIIISTVRSNNGGS-------------IGFISNPRRVNVALTRARHCLWILGNERT 827
E +I+STVR+ +GF+ +P +VNVA+TRA+ L I+G +
Sbjct: 2849 SEWRYVIVSTVRTCPRSDMDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEGLCIIG-DHL 2907
Query: 828 LTRNRSVWKALVDDAKARQCFFNAD 852
L R +W L+ +A+ A+
Sbjct: 2908 LLRCCPLWHRLLGFCEAQNSLVPAE 2932
Score = 165 (63.1 bits), Expect = 6.5e-06, Sum P(4) = 6.5e-06
Identities = 84/321 (26%), Positives = 138/321 (42%)
Query: 555 LKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLS-GIKHAVLFGDE 613
L R L +T S + L V + + IDEAAQ+ E E+ IPL + + VL GD
Sbjct: 883 LLRHRLVVTTTSQARELQ-VPAGFFSHIFIDEAAQMLECEALIPLSYALTLTRVVLAGDH 941
Query: 614 CQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQ---------YRMHPSISFFPNS 664
Q+ + S D+A G L Q YR +I F +
Sbjct: 942 MQVTPRLFSVPRDKAA-GHMLLHRLFLYYQQEVHKIAQHSRIVFHENYRSTAAIINFVSR 1000
Query: 665 YFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIEH-SCRNMVEVSVVMK 723
+FY K +P ++ R P + P F +V G E+ + S N EV+ V++
Sbjct: 1001 HFYVAK--GNP-IQASGKVPRH---PQHYPLMFCHVAGSPEQDMSRTSWLNSAEVTQVVE 1054
Query: 724 ILLNLYKGWINS---KEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQG 780
+ +Y W + +E+ I VS + AQV+A++++L + + V V S + G
Sbjct: 1055 KVQEIYNTWPHCWGPREQRHICAVS-HGAQVSALRQELRRRNLGE----VSVGSFEILPG 1109
Query: 781 GEEDIIIISTVRSNN-----GGSIG-FISNPRRVNVALTRARHCLWILGNERTLTRN--- 831
E ++++S+V + N G F + PR +N +TRA+ L +G+ L +
Sbjct: 1110 REFRVVVLSSVHNRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVGDAVALCSSGAC 1169
Query: 832 RSVWKALVDDAKARQCFFNAD 852
R +WK + + F D
Sbjct: 1170 RKLWKNFIRECIEHHSIFPED 1190
Score = 76 (31.8 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 231 LIWGPPGTGKTKTVSML-LVILLQMKFRTLVCTPT 264
LI+GP GTGKT T++M L ++ Q + L+CT T
Sbjct: 786 LIYGPFGTGKTYTLAMAALEVVQQPHTKVLICTHT 820
Score = 50 (22.7 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 231 LIWGPPGTGKT 241
+I GPPGTGKT
Sbjct: 2465 VIQGPPGTGKT 2475
Score = 43 (20.2 bits), Expect = 6.5e-06, Sum P(4) = 6.5e-06
Identities = 9/43 (20%), Positives = 24/43 (55%)
Query: 1548 QALVLTIVESKGLEFQDVLLYKFFSASPLKNQWRVVYEYMKEQ 1590
++L+ + E+ + QDV +Y S L+ +++ +++E+
Sbjct: 2182 ESLMSAVAENDSIVLQDVHIYWDTSQEQLQGTFQLEAAFLQEK 2224
Score = 42 (19.8 bits), Expect = 8.1e-06, Sum P(4) = 8.1e-06
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 1072 DEQLDMILFPRSTFILGRSGTGKTTV 1097
D+ + L + T I G GTGKT V
Sbjct: 2452 DKAVRSALQKQFTVIQGPPGTGKTVV 2477
Score = 42 (19.8 bits), Expect = 8.1e-06, Sum P(4) = 8.1e-06
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 2257 KLYRNIIKEVFSKHIGLKGKLSYGQIGSAV 2286
KL++N I+E H LS QI V
Sbjct: 1171 KLWKNFIRECIEHHSIFPEDLSLEQIEQGV 1200
Score = 37 (18.1 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 345 FLDNCVSQYHTYMENESMKQSE 366
F+ C+ + + E+ S++Q E
Sbjct: 1176 FIRECIEHHSIFPEDLSLEQIE 1197
Score = 37 (18.1 bits), Expect = 6.5e-06, Sum P(4) = 6.5e-06
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 2440 EKETMEWIKKSCTEIKDYH--SLVVLRLFVIVCLL--HL 2474
++ T W+KK + D H ++ + R +C++ HL
Sbjct: 2869 QRPTKSWLKKFLGFVVDPHQVNVAITRAQEGLCIIGDHL 2907
Score = 37 (18.1 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1783 CEEPELEKAGECFS 1796
C E +E+ G+CFS
Sbjct: 2142 CLE-HMERPGDCFS 2154
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 165 (63.1 bits), Expect = 9.2e-14, Sum P(3) = 9.2e-14
Identities = 48/135 (35%), Positives = 76/135 (56%)
Query: 706 EFIEHS-CRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVN 764
E +E S N E +V ++ L K + + IG+++PY Q+ I L
Sbjct: 1222 ETVEKSGISNHTEAVLVQGLVTLLLKAGCRACD---IGVIAPYRQQLKVISSLLQG---- 1274
Query: 765 SAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIG-FISNPRRVNVALTRARHCLWILG 823
A A++V +VD +QG ++ +II+S VRSN G++G + + RR+NVA+TRA+H L +LG
Sbjct: 1275 DAFKALEVNTVDKYQGRDKSVIIVSFVRSNAEGNLGELLQDWRRLNVAITRAKHKLLMLG 1334
Query: 824 NERTLTRNRSVWKAL 838
+ TL R + K L
Sbjct: 1335 SAPTLRRYAPLEKLL 1349
Score = 106 (42.4 bits), Expect = 9.2e-14, Sum P(3) = 9.2e-14
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + + +F ++DEA+Q+ + PL + + VL GD QLP +V++ +
Sbjct: 1065 HPIFSRRRFDFCIVDEASQISQPVCIGPLFYA--QRFVLVGDHQQLPPIVQNAEARSLGM 1122
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKI 671
SLF+ +QYRM+ +I N+ YE ++
Sbjct: 1123 DESLFKRLEHHRDAVVQLNVQYRMNSAIMSLSNALMYEGRL 1163
Score = 66 (28.3 bits), Expect = 9.2e-14, Sum P(3) = 9.2e-14
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKEL 271
LI G PGTGKT T+ L+ IL F L+ + T A+ +
Sbjct: 963 LIVGMPGTGKTTTICTLVRILHACGFSVLLTSYTHSAVDNI 1003
Score = 48 (22.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/118 (24%), Positives = 46/118 (38%)
Query: 521 CHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSV------ 574
C F + LL+S+ SAV+ LL+ LKRF + F + H +
Sbjct: 986 CGFSV--LLTSYTH----SAVDNILLK--LKRFKIG----FLRLGRPQKVHHEILPFTEE 1033
Query: 575 AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSDEACFG 631
A + ++E QL E + G+KH + + E S++S C G
Sbjct: 1034 ACRAKGIQTLEELEQLYSRELIVATTCMGVKHPIFSRRRFDFCIVDEASQISQPVCIG 1091
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 225 (84.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 78/255 (30%), Positives = 120/255 (47%)
Query: 584 IDEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKV-SDEACFGRSLFEXXXXX 641
I+EAA + E IP ++ VL GD QL P + D S+FE
Sbjct: 710 IEEAADVLEGP-IIPAVFPSLEQLVLIGDHKQLRPGCSTYALRQDPFNLSISMFERLVEN 768
Query: 642 XXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVF 701
+Q RMHP I +S YE D E Y +PG M F
Sbjct: 769 DMEYTRLTMQRRMHPQIRRLVSSV-YE----DLSDYEITKYWPS-IPG-MGEIRRFFLTH 821
Query: 702 GGREEFIEHSCR-NMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGS 760
E+ + + N+ E ++++ + L N E I ++ Y AQ I E+L S
Sbjct: 822 SRIEDNDGFASKINLFEAQMLVQFAVYLIN---NGVEPQKITCLTFYAAQKDLI-ERLLS 877
Query: 761 KYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLW 820
+ +N +KV +VDG+QG E D++++S VR+N+ +GF+S+P RV V+L+RAR L+
Sbjct: 878 ESLNREKHFIKVATVDGYQGEENDVVLLSLVRNNDRTEVGFLSSPHRVCVSLSRARRGLF 937
Query: 821 ILGNERTLTRNRSVW 835
I GN + + + +W
Sbjct: 938 IFGNAQLVAESNPLW 952
Score = 53 (23.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 196 INRTSNRRIWNSLHMKGNLKII---KELLCTDSGATVQL--IWGPPGTGKT----KTVSM 246
I + ++++I N+L G + I +L S T +L I GPPGTGK+ K +
Sbjct: 350 ILKNNSQKIVNALEPFGPGEYILDSSQLKAYQSMLTKRLSIIQGPPGTGKSFVTLKAIET 409
Query: 247 LLVILLQMKFRTLVCTPTIVAIKELASRVV 276
LL LV T A+ ++ R++
Sbjct: 410 LLENTHSHVLPILVACQTNHAVDQILIRLL 439
Score = 37 (18.1 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 263 PTIVAIKELASRVVKLVKESV 283
P+I ++EL S+ V+L ++
Sbjct: 134 PSIPTLEELTSKSVELPSNNI 154
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 192 (72.6 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 80/268 (29%), Positives = 115/268 (42%)
Query: 608 VLFGDECQLPAMVESKVSD---------EACFGRSLFEXXXXXXXXXXXXXI--QYRMHP 656
VL GD QL +V+S+++ E G SL+ + YR H
Sbjct: 839 VLAGDPKQLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYNYRSHE 898
Query: 657 SISFFPNSYFYENKI---HDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSC 712
++ P+ FY ++ V+ + + LP + P F V G E S
Sbjct: 899 ALLDLPSRLFYAGELCVRAQRAAVDSLCHWNK-LPTRGF-PLIFHGVRGSEMREGCNPSW 956
Query: 713 RNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFA-VK 771
N E VM L K N IG+++PY QV I+ L G VK
Sbjct: 957 FNPAEAVQVMMYCCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLL-----QRVGLGEVK 1011
Query: 772 VMSVDGFQGGEEDIIIISTVRSNNG-------GSIGFISNPRRVNVALTRARHCLWILGN 824
V SV+ FQG E I+I+STVRSN +GF+SNP+R NVA+TRA+ L ++GN
Sbjct: 1012 VGSVEEFQGQEFLIMILSTVRSNESLLNEELQCMLGFLSNPKRFNVAITRAKALLIVIGN 1071
Query: 825 ERTLTRNRSVWKALVDDAKARQCFFNAD 852
L + + AL+ + + F D
Sbjct: 1072 PHVLIKE-PCFSALLQYSYDNRAFIGCD 1098
Score = 172 (65.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 78/254 (30%), Positives = 110/254 (43%)
Query: 563 STASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQL----SGIKHAVLFGDECQL 616
ST SS+ M + + ++ +F + +DEA Q E E+ IPL L SG VL GD QL
Sbjct: 790 STCSSAGMFYQIGLRVGHFTHVFVDEAGQATEPETLIPLSLLSETSG--QIVLAGDPKQL 847
Query: 617 PAMVESKVSD---------EACFGRSLFEXXXXXXXXXXXXXI--QYRMHPSISFFPNSY 665
+V+S+++ E G SL+ + YR H ++ P+
Sbjct: 848 GPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYNYRSHEALLDLPSRL 907
Query: 666 FYENKI---HDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVV 721
FY ++ V+ + + LP + P F V G E S N E V
Sbjct: 908 FYAGELCVRAQRAAVDSLCHWNK-LPTRGF-PLIFHGVRGSEMREGCNPSWFNPAEAVQV 965
Query: 722 MKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFA-VKVMSVDGFQG 780
M L K N IG+++PY QV I+ L G VKV SV+ FQG
Sbjct: 966 MMYCCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLL-----QRVGLGEVKVGSVEEFQG 1020
Query: 781 GEEDIIIISTVRSN 794
E I+I+STVRSN
Sbjct: 1021 QEFLIMILSTVRSN 1034
Score = 87 (35.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 217 IKELLCTDSGATVQLIWGPPGTGKTKT-VSMLLVILLQMKF-RTLVCTPTIVAIKELASR 274
++ +L +S T +++GPPGTGKT T + +L + ++ R LVCTP+ A + R
Sbjct: 681 VRRILSGESRPTPYVLFGPPGTGKTITLIEAILQVHHRISCSRVLVCTPSNSAADLICMR 740
Query: 275 V 275
+
Sbjct: 741 L 741
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 226 (84.6 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 95/333 (28%), Positives = 145/333 (43%)
Query: 543 KDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLS 602
K LL D + L+R + T +++ + ++IDE A E ++ +PL
Sbjct: 2455 KKLLNDA-RLHELERHDIILCTCTAAASPNLKKTLSARQILIDECAMATEPQTLVPLVSF 2513
Query: 603 GIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFP 662
+ VL GD QL +V++ RSLFE QYRMH I FP
Sbjct: 2514 KPEKVVLLGDHKQLRPIVKNNHVRRLGMTRSLFERYMDRAIMLDT---QYRMHEEICKFP 2570
Query: 663 NSYFYENK----IHDSPTV-----EKRSYEKRFLPGPMYGPYSFINVFGGREEFIEHSCR 713
+ +Y + + + +V E R KR L G + G + V R E+S
Sbjct: 2571 SEAYYNDMLKTVVRERTSVLNAETEGRRQSKRILFGDIRGEEIGLVVSTARGN--ENSKA 2628
Query: 714 NMVEVSVVMKILLNLYK-GWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKV 772
N EV ++I + L G + ++ I I+SPY AQVA I+E+L + GF V
Sbjct: 2629 NFDEVKKAVEICIQLVTVGRVRPED---IAILSPYNAQVAQIRERLSDFELK--GFTVTT 2683
Query: 773 MSVDGFQGGEEDIIIISTVRSNNGGSI-------------GFISNPRRVNVALTRARHCL 819
++ QG E +I+S VRS I GF+ + ++NV +TRA+ L
Sbjct: 2684 ITKS--QGSEWQYVILSIVRSCPSDEIEPMPSREWLSKHIGFVGDENQINVGITRAQVGL 2741
Query: 820 WILGNERTLTRNRSVWKALVDDAKARQCFFNAD 852
ILGN+ L + + W+ L+ C AD
Sbjct: 2742 CILGNQAVLNCSPA-WQKLLKHYSGHGCVVTAD 2773
Score = 148 (57.2 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 84/315 (26%), Positives = 134/315 (42%)
Query: 555 LKRASLFFSTASSSYMLHSVAMKPLNF---LVIDEAAQLKESESTIPLQLSGIKHA--VL 609
L+ + +T S + LH + + P F ++IDEA+Q+ E E+ + L L+ KH VL
Sbjct: 655 LESHRIIITTTSIARHLHELKL-PKGFFTHILIDEASQMLEGEALMALGLAD-KHTRVVL 712
Query: 610 FGDECQL-P---AMVESKVSDEACFGRSLFEXXXXXXXXXXXXXI----QYRMHPSISFF 661
GD Q+ P ++ + K S+ R I YR I F
Sbjct: 713 AGDHMQMAPKLFSVTDDKRSEHTLLNRLFHYYQDQSINIAKKSRIIFNENYRSTTEIVDF 772
Query: 662 PNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGG---REEFIEHSCRNMVEV 718
++YFY + D ++ R P P P F +V G S N EV
Sbjct: 773 VSTYFY---VSDG--IKARGDVH---PHPRLKPLIFHHVRGECHLSSTITSTSWLNYAEV 824
Query: 719 SVVMKILLNLYKGWI---NSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGF-AVKVMS 774
+ V+ ++ L W K+ I ++S QVAAI+ L K GF V V +
Sbjct: 825 NSVVNMVQVLLTDWPMEWGDKDPKQICVLSEG-QQVAAIRIHLRRK-----GFYGVSVQN 878
Query: 775 VDGFQGGEEDIIIISTVRSNN------GGSIGFISNPRRVNVALTRARHCLWILGNERTL 828
+ QG + +III+TV + + F + R +N ALTRA+ + ++G+ L
Sbjct: 879 LANIQGKQFRVIIITTVHTRDKLLQLDSSCPEFFDDIRALNTALTRAQSLVVVIGDAGAL 938
Query: 829 T---RNRSVWKALVD 840
+ VW+A ++
Sbjct: 939 CCFGKCSKVWRAYIE 953
Score = 60 (26.2 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 196 INRTSNRRIWNSLHMKGNLKIIKELLCTDSG-ATVQLIWGPPGTGKTKTVSMLLVILL-Q 253
+N T ++ N + N + K C D A LI+GP GTGKT ++ L +
Sbjct: 523 VNLTKQSQLNNKQQIALNFILGK---CEDDKVAAPLLIYGPFGTGKTLCLASAAKELAHR 579
Query: 254 MKFRTLVCTPT 264
+ + L+CT T
Sbjct: 580 SQNKVLICTYT 590
Score = 57 (25.1 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTL 259
+I GPPGTGKT + ++ Q+ R L
Sbjct: 2308 IIQGPPGTGKTVVGAYIVYWFSQLNSRNL 2336
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 1537 VRKEISNYVGKQALVLTIVESKGLEFQDVLL 1567
+R+ +S++ K V TI +S+G E+Q V+L
Sbjct: 2667 IRERLSDFELKGFTVTTITKSQGSEWQYVIL 2697
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 1059 RDARELDLPFEVTDEQ---LDMILFPRSTFILGRSGTGKTTV 1097
R+ LP ++ + Q L+ L + T I G GTGKT V
Sbjct: 2280 REEAPAGLP-QLNESQFKALEKALNGKFTIIQGPPGTGKTVV 2320
Score = 39 (18.8 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 1837 WKQHADTDVGRV 1848
WK+H +GRV
Sbjct: 1200 WKEHCSFPLGRV 1211
Score = 37 (18.1 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 1162 MKSSTIGGKFATEGSLIDTDDI 1183
+KS+ + F LI TDDI
Sbjct: 1758 IKSAALTCDFYKMADLISTDDI 1779
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 173 (66.0 bits), Expect = 9.7e-13, Sum P(4) = 9.7e-13
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 770 VKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLT 829
+K+ ++D +QG E DI+I + RSN G IGF+S P+R+NV L+RAR L ++GN T T
Sbjct: 960 IKLSTIDNYQGEESDIVIATLTRSNKDGDIGFMSAPQRLNVLLSRARDVLIMIGNSNTFT 1019
Query: 830 RNRS---VWKALVD 840
+R VWK D
Sbjct: 1020 NSRKGKEVWKPFFD 1033
Score = 106 (42.4 bits), Expect = 9.7e-13, Sum P(4) = 9.7e-13
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKVSDEACFG----RSLFE 636
++++EA ++ ES L S K ++ GD QL P + +S E G RSLFE
Sbjct: 745 VLLEEAGEILESHVLTALG-SHTKQLIMIGDHQQLRPKINNYALSVEKGSGYDLNRSLFE 803
Query: 637 XXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEK---RSYEKRFLPGPMYG 693
Q+RM P IS Y + + T + R + R +
Sbjct: 804 RLVESGYPHSTLAKQHRMAPEISALVRRLTYPDLLDGDKTKTRLAPRGLQNRVVFIDHSQ 863
Query: 694 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNL-YKGWINSKEKLSIGIVSPYIAQV 751
P F++ R+ + + S +N EV +V+KI+ L +G+ +KL I ++PY+ Q+
Sbjct: 864 PEGFLHGVSDRDGDGGKGSKQNTFEVKLVLKIVKYLGQQGY--GTDKLVI--LTPYLGQL 919
Query: 752 AAIQEKL 758
++E+L
Sbjct: 920 HLLREEL 926
Score = 58 (25.5 bits), Expect = 9.7e-13, Sum P(4) = 9.7e-13
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 225 SGAT--VQLIWGPPGTGKTKTVSMLLVILLQMKFRTLV 260
SG T V LI GPPGTGK+ +++ L + T++
Sbjct: 472 SGLTQRVSLIQGPPGTGKSFVGALIAKALYKHSKETIL 509
Score = 49 (22.3 bits), Expect = 9.7e-13, Sum P(4) = 9.7e-13
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 1060 DARELDLPFEVTDEQLDMILFPRSTFILGRSGTGKTTV 1097
D+ + + E+ ++ L + F + LG GTGKTTV
Sbjct: 1578 DSMQSNYERELNEKPL--VEFTLNRVFLGSPGTGKTTV 1613
Score = 48 (22.0 bits), Expect = 3.6e-12, Sum P(5) = 3.6e-12
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 1086 ILGRSGTGKTTVLIMKLFQK 1105
+LG GTGKTTV +L+ K
Sbjct: 1325 LLGNPGTGKTTVA--RLYAK 1342
Score = 45 (20.9 bits), Expect = 6.8e-11, Sum P(5) = 6.8e-11
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 344 EFLDNCVSQYHTYMENESMKQSEDINGDIIKE 375
EFL+N S + Y+ S+K NG ++E
Sbjct: 69 EFLNNHTSLFILYLSQPSVKNR--CNGQFLQE 98
Score = 44 (20.5 bits), Expect = 3.6e-12, Sum P(5) = 3.6e-12
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 1535 DCVRKEISNYVGKQALVLTIVESKGLEFQDVLLYKFFSASP-LKNQW--RVVYEYMKEQD 1591
D + EI N GK +VL G Q + KFF+ +P L +++ V+E EQ+
Sbjct: 1406 DFLLAEIENLTGKVVVVLA-----GYRRQ---MEKFFAHNPGLPSRFPHEFVFEDYNEQE 1457
Query: 1592 L 1592
L
Sbjct: 1458 L 1458
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 203 (76.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 88/297 (29%), Positives = 139/297 (46%)
Query: 547 EDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF----LVIDEAAQLKESESTIPLQLS 602
+D +K A + T++ + M + L F +V++EAAQ+ E ES IP L
Sbjct: 1025 KDKANYLLVKEARIIAMTSTHAAMRRQ-EIADLGFHYDNIVMEEAAQITEVESFIPTALQ 1083
Query: 603 GIKHA-------VLFGDECQLPAMVESKVSDE-ACFGRSLFEXXXXXXXXXXXXXIQYRM 654
+K VL GD Q ++++ + A F +SLF Q R
Sbjct: 1084 NMKEGQLPLKRIVLCGDHLQNSPIIQNLAFRQYAHFEQSLFLRLIRLGVPAITLDQQGRA 1143
Query: 655 HPSIS-FFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINV---FG-GREEFIE 709
PSI+ F + Y+N + + P VE+ K+ G + Y FINV G G E
Sbjct: 1144 RPSIAELF--RWRYQN-LGNLPIVEQAPEFKQANAGFQF-EYQFINVPDYQGTGEREPTP 1199
Query: 710 HSCRNMVEVSVVMKILLNL-YKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGF 768
H +N+ E + I + G+ SK I I++ Y Q A I++ L + + F
Sbjct: 1200 HFVQNLGEAEYAVAIFQYMRLLGYPASK----ISILATYAGQTALIKDVLNHRCSKNTLF 1255
Query: 769 AVK--VMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILG 823
+ V +VD +QG + D II+S R+ ++G++ + RR+ VAL+RAR L+ILG
Sbjct: 1256 GMPKIVTTVDRYQGEQNDYIILSLTRTR---TVGYLRDVRRLTVALSRARLGLYILG 1309
Score = 68 (29.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 223 TDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKF---RTLVCTPTIVAIKELASRVVKL 278
T G TV I GPPGTGKT + ++ + F RTL+ + A+ +L ++V L
Sbjct: 820 TQPGLTV--IVGPPGTGKTDVATQIINNIYH-NFPTERTLLVAHSNQALNQLFQKIVAL 875
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 182 (69.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 86/314 (27%), Positives = 142/314 (45%)
Query: 546 LEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIK 605
++++ K + ++ A + +T S + + + + +V+DE + + + L K
Sbjct: 303 IKEVEKEY-IENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAFVPQIALAASLG--K 359
Query: 606 HAVLFGDECQLP--AM-----VESKVSDEACFGRSLFEXXXXXXXXXXXXXIQY--RMHP 656
V+ GD QLP AM V + ++ + + E +Q RMH
Sbjct: 360 RIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPNLFMLQEQRRMHA 419
Query: 657 SISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSF-INVFGG--REEFIEHSCR 713
IS F NS+ Y+N+++D P+V +R + P F + G ++ S
Sbjct: 420 DISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFSLKDAASGSRF 479
Query: 714 NMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQV----AAIQEKLG-SKYVNSAGF 768
N++ V M+++L G ++ + SIGIV+PY AQ I+E L +KY N
Sbjct: 480 NIMSGLVAMQMMLI---GLLDGVQ--SIGIVTPYRAQSRFLSTCIREMLQRTKYQN---I 531
Query: 769 AVKVMSVDGFQGGEEDIIIISTVRS---NNGGSIGFI-SNPRRVNVALTRARHCLWILGN 824
V +V FQG E D++I TV S G + F N R VNVA+TRAR L +
Sbjct: 532 PVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSD 591
Query: 825 ERTLTRNRSVWKAL 838
+ +N S +AL
Sbjct: 592 CHYMCKNLSRKQAL 605
Score = 80 (33.2 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 232 IWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKE 281
+WGPPGTGK+ +S ++ Q LV + A+ L S V K +++
Sbjct: 170 VWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEK 219
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 182 (69.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 86/314 (27%), Positives = 142/314 (45%)
Query: 546 LEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPLQLSGIK 605
++++ K + ++ A + +T S + + + + +V+DE + + + L K
Sbjct: 303 IKEVEKEY-IENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAFVPQIALAASLG--K 359
Query: 606 HAVLFGDECQLP--AM-----VESKVSDEACFGRSLFEXXXXXXXXXXXXXIQY--RMHP 656
V+ GD QLP AM V + ++ + + E +Q RMH
Sbjct: 360 RIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPNLFMLQEQRRMHA 419
Query: 657 SISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSF-INVFGG--REEFIEHSCR 713
IS F NS+ Y+N+++D P+V +R + P F + G ++ S
Sbjct: 420 DISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFSLKDAASGSRF 479
Query: 714 NMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQV----AAIQEKLG-SKYVNSAGF 768
N++ V M+++L G ++ + SIGIV+PY AQ I+E L +KY N
Sbjct: 480 NIMSGLVAMQMMLI---GLLDGVQ--SIGIVTPYRAQSRFLSTCIREMLQRTKYQN---I 531
Query: 769 AVKVMSVDGFQGGEEDIIIISTVRS---NNGGSIGFI-SNPRRVNVALTRARHCLWILGN 824
V +V FQG E D++I TV S G + F N R VNVA+TRAR L +
Sbjct: 532 PVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSD 591
Query: 825 ERTLTRNRSVWKAL 838
+ +N S +AL
Sbjct: 592 CHYMCKNLSRKQAL 605
Score = 80 (33.2 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 232 IWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKE 281
+WGPPGTGK+ +S ++ Q LV + A+ L S V K +++
Sbjct: 170 VWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEK 219
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 181 (68.8 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 69/222 (31%), Positives = 106/222 (47%)
Query: 652 YRMHPSISFFPNSYFYENKIHDSPTV-EKRSYEKRFLPG-----------PM-YGPYSFI 698
YR PSI + FY++++ P + EK S E R L P +G + F
Sbjct: 1034 YRALPSIMSIYSRLFYDDEL--IPVLSEKDSRESRLLSKLRCVFESEKDIPQAHGTF-FY 1090
Query: 699 NVFG-GREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEK 757
+ G R+ S N EV V + + LY+ + + + IGI++PY QV +
Sbjct: 1091 GIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQ---IGIITPYQKQV----KM 1143
Query: 758 LGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNG-------GSIGFISNPRRVNV 810
L S ++ + K+ SV+ FQG E DII+ISTVRS+ S+GF+ +R+NV
Sbjct: 1144 LRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRCSKRLNV 1203
Query: 811 ALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQCFFNAD 852
A++RAR + I GN L + W+ L+ +F D
Sbjct: 1204 AVSRARAMMIIFGNPHLLAVDEC-WRQLILFCVKNNAYFGCD 1244
Score = 75 (31.5 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHA--VLFGDECQLPAMVESKVSDEACFGRSLFE 636
++ DEA Q E E+ +P+ + K + VL GD QL ++V S+++ + F S E
Sbjct: 945 VLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLE 1001
Score = 64 (27.6 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 231 LIWGPPGTGKTKT-VSMLLVILLQMK-FRTLVCTPTIVAIKELASRVV 276
+++GPPG+GKT T + LL ++ + R LV TP+ + + R++
Sbjct: 806 VLFGPPGSGKTMTLIETLLQLVRNLPGARILVGTPSNSSADLVTKRLI 853
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 199 (75.1 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 67/208 (32%), Positives = 104/208 (50%)
Query: 650 IQYRMHPSISFFPNSYFYENKIHD-SPTVEKRSYEK-RFLPGPMYGPYSFINVFGGRE-E 706
+ YR HP I PN FY+ ++ + + Y LP + P F V G E E
Sbjct: 757 MNYRSHPYILEVPNRLFYDGELKACADEISSNQYCMWEHLPSKGF-PVIFHGVPGKDERE 815
Query: 707 FIEHSCRNMVEVSVVM----KILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSK- 761
S N+ E+++++ K+LL K I+ IGI++PY QV I+ + +
Sbjct: 816 SNSPSFFNIYEINILVDYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVEKIKRAIDADK 875
Query: 762 -YVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSN-------NGGSIGFISNPRRVNVAL 812
+ + G +KV SV+ FQG E +I++STVRS+ +IGF+ N +R NVA+
Sbjct: 876 DFQDYMGIDNLKVGSVEEFQGQERKVIMVSTVRSSVKYISLDETFNIGFLKNEKRFNVAV 935
Query: 813 TRARHCLWILGNERTLTRNRSVWKALVD 840
TRA+ L ++GN L + S W +D
Sbjct: 936 TRAKSLLIMVGNPMILRTDES-WGRFID 962
Score = 64 (27.6 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 231 LIWGPPGTGKTKT-VSMLLVILLQMKFR-TLVCTPTIVAIKELASRVV 276
L++GPPGTGKT T V + + + L C P+ A +L +++
Sbjct: 552 LVFGPPGTGKTVTIVEAIKQVEKNIPDAYILACAPSNSAADQLCEKLI 599
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 207 (77.9 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 57/155 (36%), Positives = 87/155 (56%)
Query: 697 FINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAI 754
F V G+EE S N E + V KI L K + IGI++PY Q + +
Sbjct: 20 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYL 76
Query: 755 QEKL---GSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVA 811
+ + GS + V++ SVD FQG E+D II+S VR+N IGF+++PRR+NVA
Sbjct: 77 VQYMQFSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 135
Query: 812 LTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ 846
LTRAR+ + I+GN + L++ + +W L+ K ++
Sbjct: 136 LTRARYGVIIVGNPKALSK-QPLWNHLLSYYKEQK 169
Score = 40 (19.1 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1358 LKEESYKGDEF 1368
L ++SY GDEF
Sbjct: 350 LSQDSYLGDEF 360
Score = 40 (19.1 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 1575 PLKNQWRVVYEYMKEQDLLDSTSPGS 1600
PL N + ++ K + L+++ +PG+
Sbjct: 175 PLNNLRESLMQFSKPRKLVNTVNPGA 200
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 212 (79.7 bits), Expect = 6.7e-12, Sum P(3) = 6.7e-12
Identities = 79/273 (28%), Positives = 136/273 (49%)
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL---PAMVESKVSDEACFGR--SLFE 636
L+++EAA++ E+ I +S ++H V+ GD QL PA+ E V+ +G S+FE
Sbjct: 1464 LIVEEAAEVLEAH-IISAMISTVEHVVMIGDHKQLRPNPAVHELGVA----YGLRISMFE 1518
Query: 637 XXXXXXXXXXXXXIQYRMHPSISF-FPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPY 695
Q+RM+ +IS FY+N + D+ V Y + G M
Sbjct: 1519 RLVERGLPFSQLRQQHRMNLTISDKIVKLSFYDN-VTDAENVGL--YPD--VQG-MATNL 1572
Query: 696 SFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQ 755
F + E E S N E+S+ + ++ +L K + + I +++ Y AQ +
Sbjct: 1573 FFWSHTSMEESPDEVSWLNKHEISMTVALVKHLLKQNYTTND---IVVLATYSAQKNLMY 1629
Query: 756 EKLGSKYVNSAGF-AVKVMSVDGFQGGEEDIIIISTVRSNNGG----SIGFISNPRRVNV 810
+ + + ++ + V +VD FQG E I+I+S VRS+ GG IGF++ R+ V
Sbjct: 1630 REYANVFGSTPDSNVIPVETVDSFQGKERKIVIVSLVRSHRGGRENTGIGFLAVANRICV 1689
Query: 811 ALTRARHCLWILGNERTLTRNRSVWKALVDDAK 843
ALTRA+H ++I+GN + N +W +V++ +
Sbjct: 1690 ALTRAQHGMYIIGNGAYIMNNSELWNKIVNNLR 1722
Score = 66 (28.3 bits), Expect = 6.7e-12, Sum P(3) = 6.7e-12
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 222 CTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVA------IKELASRV 275
C + LI GPPGTGKT ++ +LQ + + P +V + L R+
Sbjct: 1049 CNTFKYELSLIQGPPGTGKTHIGVQIVKTILQNRSYWKITEPILVVCFTNSGLDNLLERI 1108
Query: 276 VKLVKESVE 284
++++ E
Sbjct: 1109 YQMIENDEE 1117
Score = 48 (22.0 bits), Expect = 6.7e-12, Sum P(3) = 6.7e-12
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 1774 RAGTIYLERCEEPELEKAGECFSLAG--CYKLAADVYARG-SFLAECLDVCSKGKLF 1827
R T YLE+C G CF+ C + V G + A+C + C K F
Sbjct: 1989 RRCTSYLEKCGHTCENDCGICFTTKTHICQNMCQKVLNCGHTCSAKCGESCPPCKAF 2045
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 195 (73.7 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 79/277 (28%), Positives = 127/277 (45%)
Query: 580 NFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXX 639
+F ++DEA+Q+ + PL + + VL GD QLP +V+++ + SLF+
Sbjct: 763 DFCIVDEASQISQPVCVGPLFYA--RRFVLVGDHQQLPPIVQNQEARSLGMDESLFKRLE 820
Query: 640 XXXXXXXXXXIQYRMHPSISFFPNSYFYENKIH-DSPTVEKRSYEKRFLPG--PMYGPYS 696
+QYRM+ I NS YE ++ S LP P G +
Sbjct: 821 LHRDAVVQLNVQYRMNRQIMSLSNSLMYEGRLECGSERTATSLITLPLLPSVLPELGSLA 880
Query: 697 FINVF---GGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKL----------SIGI 743
+I F++ S +E +V + N + + K L IG+
Sbjct: 881 WIQATLLPSNPVCFLDCSAVPALE-TVEQGGISNHTEAALIHKLLLLLIKAGCKPGDIGV 939
Query: 744 VSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSN-NGGSIG-F 801
++PY Q+ I L + SA V+V +VD +QG ++ +I++S VRS G +G
Sbjct: 940 IAPYRQQLRTISGLLQA----SAFTGVEVNTVDRYQGRDKSLILLSFVRSTAEEGPLGEL 995
Query: 802 ISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKAL 838
+ + RR+NVA+TRA+ L +LG+ TL R V K L
Sbjct: 996 LKDWRRLNVAITRAKSKLLMLGSATTLRRYAPVEKLL 1032
Score = 66 (28.3 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKEL 271
LI G PGTGKT T+ L+ IL F L+ + T A+ +
Sbjct: 652 LIVGMPGTGKTTTICTLVRILHACGFSVLLTSYTHSAVDNI 692
Score = 40 (19.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 348 NCVSQYHTYMENESMKQSEDINGDIIKEK 376
NC + Y ++ S SE + GD+++++
Sbjct: 360 NC-ALYQRALDGTSAGVSEGVAGDLLQQE 387
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 219 (82.2 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 84/302 (27%), Positives = 147/302 (48%)
Query: 542 EKDLLEDLLKRFCLKRASL--FFSTASSSYMLHSVAMKPLNFLVIDEAAQLKESESTIPL 599
E L EDL LK A + +T ++ Y ++P ++++EAA++ E+ TI
Sbjct: 958 ELRLQEDL---HILKDAEVVGMTTTGAAKYRQILQQVEP-RIVIVEEAAEVLEAH-TIAT 1012
Query: 600 QLSGIKHAVLFGDECQL-PAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSI 658
+H +L GD QL P+ ++ SLFE Q+RM P I
Sbjct: 1013 LSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMRPEI 1072
Query: 659 SFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFIEHSCRNMVEV 718
+ + Y++ + + P+V K YE+ + G + + F +E S +N E
Sbjct: 1073 ARLLTPHIYQD-LENHPSVLK--YEQ--IKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEA 1127
Query: 719 SVVMKILLNLY-KGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDG 777
V+++ L + ++ S+ I I++ Y Q+ +++ + K AG +KV VD
Sbjct: 1128 HFVVELCQYLLCQEYLPSQ----ITILTTYTGQLFCLRKLMPVK--TFAG--IKVHVVDK 1179
Query: 778 FQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKA 837
+QG E DII++S VRSN G +GF+ P R+ VAL+RA+ ++ +GN + L + +W
Sbjct: 1180 YQGEENDIILLSLVRSNQEGKVGFLQIPNRICVALSRAKKGMYCIGNMQMLAKV-PLWSR 1238
Query: 838 LV 839
++
Sbjct: 1239 II 1240
Score = 53 (23.7 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMK 255
+I GPPGTGKT ++ LL K
Sbjct: 609 IIQGPPGTGKTYVGLKIVQALLTNK 633
Score = 44 (20.5 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 28/137 (20%), Positives = 61/137 (44%)
Query: 1432 RNNGNDGRQEKRQLSDIFNLRQNFRTHVGVLNLAQSIIELLYRFFPHSVDILKPETSLIY 1491
R N G K++L +I +++ + G ++ +Q ++ L + L+PE LI
Sbjct: 1619 RKNLRYGTSIKQRLEEIEIVKEKIQGSAGEISTSQEQLKALLKS-KTLFHQLRPEEFLIL 1677
Query: 1492 GEPPI-----LLESGDEENAILKIFGNTGEVGGNM--VGFGAEQVILVRDDCVRKEISNY 1544
E + + G EN+I + + + + G++ V G +Q + R +++ +
Sbjct: 1678 QEKLAQKNLSVKDLGLVENSI-RFYDHLANLEGSLEKVHCGEQQSVRTR----LEQVHEW 1732
Query: 1545 VGKQALVLTIVESKGLE 1561
+ K+ L + E L+
Sbjct: 1733 LAKKRLSFSSQELSDLQ 1749
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 195 (73.7 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 79/291 (27%), Positives = 141/291 (48%)
Query: 566 SSSYMLHSVAMK-PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKV 624
SS + HS+ K ++ +IDEA+Q+ PLQL+ + VL GD QLP +V++
Sbjct: 1045 SSLGVYHSIFNKRKFDYCIIDEASQIPLPICLGPLQLA--EKFVLVGDHYQLPPLVKNSR 1102
Query: 625 SDEACFGRSLFEXXXXXX-XXXXXXXIQYRMHPSISFFPNSYFYE-NKIHDSPTVEKR-- 680
+ + SLF+ +QYRM+ I+ + Y N + S T+ ++
Sbjct: 1103 TSKDGLSLSLFKLLSEKHPEAVTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTISQKKL 1162
Query: 681 ----SYEKRFLP---GPMYGPYSFIN-----VFGGREEF--IEHSCRNMVEVSVVMKILL 726
++ LP ++ IN +F ++ +E N++E ++
Sbjct: 1163 ILPKAHLSDGLPDSSSSLHWVNKLINPSHSVIFFNTDDILGVESKTNNILENHTEAFLIE 1222
Query: 727 NLYKGWINSKEKLS-IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDI 785
++ K S IGI+S Y +QV + + L S + +++ +VD +QG ++DI
Sbjct: 1223 QAVSSFLERGVKQSSIGIISIYKSQVELLSKNLKS-FTE-----IEINTVDRYQGRDKDI 1276
Query: 786 IIISTVRSNNGGSIG-FISNPRRVNVALTRAR-HCLWILGNERTLTRNRSV 834
I+IS VRSN+ +G + + R+NVAL+RA+ C+ + G+ TL+ + V
Sbjct: 1277 ILISFVRSNSKNLVGELLRDWHRLNVALSRAKVKCI-MFGSLSTLSSSNIV 1326
Score = 76 (31.8 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKEL 271
LI G PGTGKT T+S L+ LL K + L+ + T +A+ +
Sbjct: 951 LILGMPGTGKTTTISSLIRSLLAKKKKILLTSFTHLAVDNI 991
Score = 40 (19.1 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 2232 HLFDFIFPLEWRESLNENMISLK 2254
HL + +W +LNEN I+ K
Sbjct: 1328 HLLKLLEKNKWIFTLNENDIATK 1350
Score = 38 (18.4 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 459 IGEDNFHVMATLISLLDSFE 478
I ED+F + A ++ LDS E
Sbjct: 250 IDEDDFALEAEDLAALDSLE 269
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 216 (81.1 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 88/320 (27%), Positives = 152/320 (47%)
Query: 526 RKLLSSFNELNLPSA--VEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMK--PLNF 581
RK+LS + + E L EDL LK A + T + + + K P
Sbjct: 947 RKILSYERQYRTSAERMAELRLQEDL---HILKDAQVVGMTTTGAAKYRQILQKVEP-RI 1002
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKVSDEACFGRSLFEXXXX 640
++++EAA++ E+ TI +H +L GD QL P+ ++ SLFE
Sbjct: 1003 VIVEEAAEVLEAH-TIATLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVK 1061
Query: 641 XXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINV 700
Q+RM P I+ + Y++ + + P+V K YEK + G + +
Sbjct: 1062 VNIPFVRLNYQHRMCPEIARLLTPHIYQD-LENHPSVLK--YEK--IKGVSSNLFFVEHN 1116
Query: 701 FGGREEFIEHSCRNMVEVSVVMKILLN-LYKGWINSKEKLSIGIVSPYIAQVAAIQEKLG 759
F +E S +N E V+++ L + ++ S+ I I++ Y Q+ +++ +
Sbjct: 1117 FPEQEIQEGKSHQNQHEAHFVVELCKYFLCQEYLPSQ----ITILTTYTGQLFCLRKLMP 1172
Query: 760 SKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCL 819
+K AG V+V VD +QG E DII++S VRSN G +GF+ R+ VAL+RA+ +
Sbjct: 1173 AK--TFAG--VRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSRAKKGM 1228
Query: 820 WILGNERTLTRNRSVWKALV 839
+ +GN + L + +W ++
Sbjct: 1229 YCIGNMQMLAKV-PLWSKII 1247
Score = 61 (26.5 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 25/65 (38%), Positives = 30/65 (46%)
Query: 231 LIWGPPGTGKT----KTVSMLLV------ILLQMKFRTLVCTPTIVAIKELASRVVKLVK 280
+I GPPGTGKT K V LL I LQ KF LV T A+ + + K
Sbjct: 616 IIQGPPGTGKTYVGLKIVQALLTNESVWQISLQ-KFPILVVCYTNHALDQFLEGIYNCQK 674
Query: 281 ESVER 285
S+ R
Sbjct: 675 TSIVR 679
Score = 38 (18.4 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 2007 DLLIMNQQLNASKRHQSVNGETLSA---RKILDFHLHTISSKYVWEDEYVLVEKICNNRI 2063
++ I+ +++ S + + E L A RK L LH + ED +L EK+ +
Sbjct: 1642 EIEIIKEKIQGSAGEIATSQERLKALLERKSL---LHQLLP----EDFLMLKEKLAQKNL 1694
Query: 2064 SVQTL 2068
SV+ L
Sbjct: 1695 SVKDL 1699
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 183 (69.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 86/321 (26%), Positives = 151/321 (47%)
Query: 526 RKLLSSFNELNLPSAVEKDLLE---DLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF- 581
R + FNEL A E LL D K +K A + T + + + + L F
Sbjct: 1015 RYISDIFNELEEFRAFE--LLRTGLDRSKYLLVKEAKIIAMTCTHAALKRKELVN-LGFR 1071
Query: 582 ---LVIDEAAQLKESESTIPLQLSG-------IKHAVLFGDECQLPAMVESKVSDE-ACF 630
++++E+AQ+ E E+ IPL L +K ++ GD QLP ++++ + +
Sbjct: 1072 YDNILMEESAQILEIETFIPLLLQNPLDGLNRLKRWIMIGDHHQLPPVIKNMAFQKYSNM 1131
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSI-SFFPNSYFYENKIHDSPTVEKRSYEKRFLPG 689
+SLF Q R SI S + Y K+ D + +R K+ PG
Sbjct: 1132 EQSLFTRLVRLGVPTVDLDGQGRARASICSLYKWRY---KKLEDLQHIFERDEYKQANPG 1188
Query: 690 PMYGPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILLNL-YKGWINSKEKLSIGIV 744
++ Y INV F G G E + +N+ E ++ + + + G+ +K I I+
Sbjct: 1189 FVHD-YQLINVEDFKGVGESEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAK----ISIL 1243
Query: 745 SPYIAQVAAIQEKLGSKYVNSA--GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFI 802
+ Y Q I++ + ++ N+ G+ K+ +VD +QG + D I+IS VR+ ++G +
Sbjct: 1244 TTYNGQKHLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTK---AVGHL 1300
Query: 803 SNPRRVNVALTRARHCLWILG 823
+ RR+ VA++RAR L++ G
Sbjct: 1301 RDVRRLVVAMSRARLGLYVFG 1321
Score = 70 (29.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 53/239 (22%), Positives = 95/239 (39%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTPTIVAIKELASRVVKLVKESVERDCR 288
L+ GPPGTGKT ++ + RTL+ T + A+ +L +++ L + ER
Sbjct: 833 LVVGPPGTGKTDVAVQIISNIYHNHPNQRTLIVTHSNQALNQLFEKIMAL--DIDER--- 887
Query: 289 DALFFPLGEILLLGNNER-LKVDSGVEEI-YLDYRVKRLADCFAPLTGWSHCFASMVEFL 346
+L LG+ E L+ + ++Y + + D + + +
Sbjct: 888 --------HLLRLGHGEEALETEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNA 939
Query: 347 DNCVSQYHTYMENESMKQSEDINGDIIKEK-ECGKEADASDVEIK-PFLEFVRERFKCII 404
C + + Y+ N M + E I K E E ++ E + PF +F + + +
Sbjct: 940 YTCETAGYFYLYNV-MARWEKFQSQISVHKGEADAEKLRAEFEKEFPFGKFFADAPQPLF 998
Query: 405 NG---DIIKEKECGKEADASDV--EIKPF--LEFVR---ERFKCIAAPLRSCIFNFCTH 453
G D + + C SD+ E++ F E +R +R K + I CTH
Sbjct: 999 KGANYDELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKIIAMTCTH 1057
Score = 49 (22.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 507 IVDIKYLLHKRR------SECHFVLRKLLS 530
I+D++ LL RR +CH ++R LLS
Sbjct: 271 IIDLEALLPTRRFFNTVLDDCHLIVRALLS 300
Score = 37 (18.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 508 VDIKYLLHKRRSECHFVLRKLLSSFNELNLPSAVEKDLLEDLLK 551
+D ++LL E K S + +N A DLL + K
Sbjct: 884 IDERHLLRLGHGEEALETEKDYSRYGRVNYVLAKRMDLLSQVQK 927
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 144 (55.7 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 52/207 (25%), Positives = 96/207 (46%)
Query: 651 QYRMHPSISFFPNSY--FYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGREEFI 708
+Y +H ++ P + ++ + ++E R EKR L + + ++ ++ F
Sbjct: 332 EYSLHTILNPQPKKFRNLFDPLVLIDTSLE-RDVEKR-LETYEHAVFDTNSINKTKQGF- 388
Query: 709 EHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQ---VAAIQEKLGSKYVNS 765
S N+ E + + L K + + I I++PY Q V + E+ G++ +
Sbjct: 389 --SYANLAEAKIAIGHYQRLLKYGVQPSD---IAIITPYKGQTSLVTKLMEEFGAETGYT 443
Query: 766 AGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNE 825
+ +VD QG E +++I + VRSN ++GF+S RR+NV +TRA+ +GN
Sbjct: 444 DFVQTTIGTVDSVQGKEYEVVIFTMVRSNPRKTMGFVSELRRLNVVITRAKRHFMFIGNG 503
Query: 826 RTLTRNRSVWKALVDDA-KARQCFFNA 851
L ++ D+ K CF NA
Sbjct: 504 YLLAESKK------DEIRKLYDCFKNA 524
Score = 107 (42.7 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 69/272 (25%), Positives = 111/272 (40%)
Query: 562 FSTASSSYMLHSVAMKPLN--FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAM 619
F+T +S++ + K + +IDEAAQ+ E++ T P +K V+ GD QLPA+
Sbjct: 213 FATIGASFVDFVMKHKKFDPCLCIIDEAAQVMEAQ-TWPAVYK-MKRIVMAGDPKQLPAL 270
Query: 620 VESKVSDEA-CFG--RSLFEXXXXXXXXXXXXXI--QYRMHPSISFFPNSYFYENKIHDS 674
V +DEA FG S+ + + QYR + I+ + N+ FY N++
Sbjct: 271 V---FTDEAKAFGLQNSVMDRILEKKNNFSWIMLENQYRSNAKIATWSNTCFYHNQLKTD 327
Query: 675 PTVEKRSYEKRFLPGPMYGPYSFINVFGGR---EEFIEHSCRNMVEV---SVVMKILLNL 728
V+ Y + P P F N+F + +E +E +V +N
Sbjct: 328 --VKCHEYSLHTILNPQ--PKKFRNLFDPLVLIDTSLERDVEKRLETYEHAVFDTNSINK 383
Query: 729 YK---GWINSKE-KLSIGIVSPYIAQ-VAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEE 783
K + N E K++IG + V + + Y K+M G + G
Sbjct: 384 TKQGFSYANLAEAKIAIGHYQRLLKYGVQPSDIAIITPYKGQTSLVTKLMEEFGAETGYT 443
Query: 784 DII--IISTVRSNNGGSIGFI------SNPRR 807
D + I TV S G + SNPR+
Sbjct: 444 DFVQTTIGTVDSVQGKEYEVVIFTMVRSNPRK 475
Score = 96 (38.9 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 232 IWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVK 280
I GPPGTGKT T+++LL L+Q K + +V PT A+ + K +K
Sbjct: 87 IQGPPGTGKTFTLTLLLCRLIQQKKQVVVLAPTREALANIRMMTKKTLK 135
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 1614 SELKQLYVAITRTRQRLW-------IWENKEEFSKPMFDYWK 1648
SEL++L V ITR ++ + E+K++ + ++D +K
Sbjct: 481 SELRRLNVVITRAKRHFMFIGNGYLLAESKKDEIRKLYDCFK 522
Score = 37 (18.1 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 1085 FILGRSGTGKTTVLIMKLFQKEKLHNMALEGFFGVNNSSQETEAEKD 1131
F + RS KT + +L + + A F + N E++KD
Sbjct: 466 FTMVRSNPRKTMGFVSELRRLNVVITRAKRHFMFIGNGYLLAESKKD 512
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 174 (66.3 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 47/111 (42%), Positives = 72/111 (64%)
Query: 723 KILLNLYKGWINSKEKLS-IGIVSPYIAQVAAIQEKLGSKYVNS-AGFAVKVMSVDGFQG 780
K++ +L K ++ + + S IGI++PY Q+ K+ S Y NS + AV+V +VD +QG
Sbjct: 918 KLVFHLTKLYLKAGCRPSDIGIIAPYRQQL-----KMISNYFNSLSASAVEVNTVDKYQG 972
Query: 781 GEEDIIIISTVRSNNGGSIG-FISNPRRVNVALTRARHCLWILGNERTLTR 830
++ +II+S VRSN G +G + + RR+NVALTRA+H L +LG TL R
Sbjct: 973 RDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTLNR 1023
Score = 145 (56.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 67/240 (27%), Positives = 109/240 (45%)
Query: 580 NFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXX 639
+F ++DEA+Q+ + PL + VL GD QLP +V+S + E SLF+
Sbjct: 758 DFCIVDEASQISQPICLGPLFFAD--RFVLVGDHQQLPPLVKSAEARELGMSESLFKRLE 815
Query: 640 XXXXXXXXXXIQYRMHPSISFFPNSYFYENKIH---D--SPTVEKRSYEKRFLPGPMYGP 694
+QYRM+ I N YE ++ D S V + + K L +
Sbjct: 816 RNQEAVVQLTVQYRMNSKIMALSNKLVYEGRLECASDRVSNAVVQLPHIKTLLLELEFRE 875
Query: 695 YSFINVFGGREEFIEHS---C-RNMVEVSVVMKILLNLYKGWINSK-----EKLSI--GI 743
S +++ ++ +E S C N ++ + WI +K KL + G
Sbjct: 876 -SQESMW--IKDVLEPSNPVCFLNTEKIPALETEEKGGISNWIEAKLVFHLTKLYLKAGC 932
Query: 744 VSPYIAQVAAIQEKLG--SKYVNS-AGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIG 800
I +A +++L S Y NS + AV+V +VD +QG ++ +II+S VRSN G +G
Sbjct: 933 RPSDIGIIAPYRQQLKMISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLG 992
Score = 71 (30.1 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 646 LIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLKK 692
Score = 41 (19.5 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 13/60 (21%), Positives = 23/60 (38%)
Query: 426 KPFLEFVRERFKCIAAPLRSCIFNFCTHIPKCYIGEDNFHVMATLISLLDSFETLLFEDN 485
KP + + + C R C+ HI + Y + H+ T D E + +D+
Sbjct: 35 KPTRKIIPKTKLCKGVNNRYCVL----HIKEVYAQREEKHLTITASQEGDDLELCILKDD 90
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 166 (63.5 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 59/158 (37%), Positives = 83/158 (52%)
Query: 694 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKGW-------INSKEKLSIGIVS 745
P F V G E E S N E+ VV++ L L + I+ KE IGI+S
Sbjct: 540 PIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKE---IGIIS 596
Query: 746 PYIAQVAAIQEKLGSK-----YVNSAGFAVKVMSVDGFQGGEEDIIIISTVRS------- 793
PY QV I+ + SK + G +KV SV+ FQG E +I+ISTVRS
Sbjct: 597 PYRKQVEKIRLAITSKDPVLRALPDIG-QLKVGSVEEFQGQERRVILISTVRSCSEYLQL 655
Query: 794 NNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRN 831
+ +GF+ NP+R+NVALTRA+ L ++GN L+++
Sbjct: 656 DQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKD 693
Score = 135 (52.6 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 55/158 (34%), Positives = 77/158 (48%)
Query: 652 YRMHPSISFFPNSYFYEN--KIHDSPTVEKRSYEKRFLPGPMYG-PYSFINVFGGRE-EF 707
YR H +I PN FY++ K ++ + R++ + P G P F V G E E
Sbjct: 495 YRSHKAILKVPNELFYDSELKAYEGSEPDVRNFYCTWEELPNRGVPIIFHGVCGEDEREA 554
Query: 708 IEHSCRNMVEVSVVMKILLNLYKGW-------INSKEKLSIGIVSPYIAQVAAIQEKLGS 760
S N E+ VV++ L L + I+ KE IGI+SPY QV I+ + S
Sbjct: 555 KSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKE---IGIISPYRKQVEKIRLAITS 611
Query: 761 K-----YVNSAGFAVKVMSVDGFQGGEEDIIIISTVRS 793
K + G +KV SV+ FQG E +I+ISTVRS
Sbjct: 612 KDPVLRALPDIG-QLKVGSVEEFQGQERRVILISTVRS 648
Score = 75 (31.5 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 187 KKSLFVIFLINRTSNRRIWNSLHMKGNLKIIKELLCTDSGATVQLIWGPPGTGKTKT-VS 245
++SLF R +R++ + + + +K ++ S LI+GPPGTGKT T V
Sbjct: 240 QRSLFTGIFQPRWFDRKVEAN---EEQCQAVKHIVTGMSRPAPYLIFGPPGTGKTVTLVE 296
Query: 246 MLLVILLQMK-FRTLVCTPTIVAIKELASRVV 276
+ + K R L C P+ A L R++
Sbjct: 297 AIKQVWSCFKDARILACAPSNSAADLLCQRLL 328
Score = 44 (20.5 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 1617 KQLYVAITRTRQRLWIWENKEEFSKPMFDYWKKRFLVQVRRLDDSLAQAMQVASSPEE 1674
K+L VA+TR + L + N SK +W RFL R D+ + P E
Sbjct: 668 KRLNVALTRAKALLIVVGNAAVLSKD--PHWH-RFLRYCR--DEGAYRGYPYEEEPPE 720
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 170 (64.9 bits), Expect = 5.5e-10, Sum P(4) = 5.5e-10
Identities = 67/234 (28%), Positives = 113/234 (48%)
Query: 603 GIKHAVLFGDECQLPAMVESK-VSDEACFGRSLFEXXXXXXXXXXXXXIQYRMHPSIS-F 660
G+K +L GD QLP +V+++ ++ + F +SLF Q R PSIS
Sbjct: 1194 GLKRVILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRLEIPHITLDRQGRSRPSISEL 1253
Query: 661 FPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINV-----FG-GREEFIEHSCRN 714
F S+ Y+ + D P V+++ K PG Y Y INV +G G E + +N
Sbjct: 1254 F--SWKYKG-LQDLPLVKEQLQFKLANPGLAYD-YQLINVDESDGYGVGESEPTPYFYQN 1309
Query: 715 MVEVSVVMKILLNLYK-GWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYV------NSAG 767
+ E ++ + L G+ + K I +++ Y Q +++ +K G
Sbjct: 1310 LGEAEYIVAMFQYLIAIGYPSEK----ITVLTTYNGQKNLLRDVFKAKCTPQDPKKTQYG 1365
Query: 768 FAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWI 821
+K+ ++D +QG + DII++S VR+ G I + RR+ VA++RAR L+I
Sbjct: 1366 LPLKITTIDKYQGQQNDIILLSLVRTKQ---YGHIRDVRRLIVAMSRARLGLYI 1416
Score = 84 (34.6 bits), Expect = 5.5e-10, Sum P(4) = 5.5e-10
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 218 KELLCTDSGA---TVQLIWGPPGTGKTKTVSMLLVILLQMK--FRTLVCTPTIVAIKELA 272
K++ SG + LI GPPGTGKT ++ + RTL+ T + A+ +L
Sbjct: 867 KQIEAISSGMKRDNLTLIVGPPGTGKTDIAVQIISNIYHSSPNERTLIITHSNQALNQLF 926
Query: 273 SRVVKL-VKESVERDCRDALFFPLGEILLLGNNERLK--VDSGVEEIYLDYRVKRL---- 325
++ +L + E R L G+ L N K +G + +LD R+K+L
Sbjct: 927 EKIYRLDINE------RYLLRLGHGQKQLSSTNSTQKDFTKTGRIDFWLDLRLKKLDQVD 980
Query: 326 --ADCFAPLTGWSH-CFASMVEFLDNCVSQYHTYMENESMKQSEDINGDIIKEK 376
A + S+ C ++ F + +S++ + + S+ Q +D +GD K K
Sbjct: 981 KLAKSISVTDDVSYTCDTALHFFSYHILSRFEKFQYDLSLLQDDD-DGDEKKIK 1033
Score = 57 (25.1 bits), Expect = 5.5e-10, Sum P(4) = 5.5e-10
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 555 LKRASLFFSTASSSYMLHSVAMKPLNF----LVIDEAAQLKESESTIPLQL 601
LK++ + T + + + + ++ L F L+++E+AQ+ + ES IPLQL
Sbjct: 1115 LKQSKIVAMTCTHAALKRNELLR-LGFKFDNLLMEESAQISDIESFIPLQL 1164
Score = 39 (18.8 bits), Expect = 5.5e-10, Sum P(4) = 5.5e-10
Identities = 16/75 (21%), Positives = 35/75 (46%)
Query: 13 KKKRAVPYDYGFTDTVFSWSLEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVF---PLLE 69
K K + G +++ +++ E+L KD+ I ++++ Q + VF P ++
Sbjct: 336 KSKSVLEGLLGILKVYYNFDIDNFTGEELTKDQATGI--HYQNI-QELQKIVFKNFPEIK 392
Query: 70 ETRANLMSGMEKISN 84
E +S +E S+
Sbjct: 393 EIALRNVSFVESKSD 407
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 161 (61.7 bits), Expect = 8.0e-10, Sum P(4) = 8.0e-10
Identities = 43/127 (33%), Positives = 76/127 (59%)
Query: 704 REEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKL-GSKY 762
REE + N VE +V++++ +L + + E IG+++ Y +Q+A ++ KL K
Sbjct: 1445 REEAKGNRIVNPVEAQLVVQLVESLMTLGVPANE---IGVMTHYRSQLALLKHKLLRGKN 1501
Query: 763 VNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIG-FISNPRRVNVALTRARHCLWI 821
A AV++ + D FQG +++++++S VRSN IG + + RR+NVA TRA+ L +
Sbjct: 1502 TGDAT-AVEMHTADRFQGRDKEVVVLSLVRSNEACHIGDLLRDWRRINVAFTRAKTKLLV 1560
Query: 822 LGNERTL 828
+G+ TL
Sbjct: 1561 IGSRETL 1567
Score = 88 (36.0 bits), Expect = 8.0e-10, Sum P(4) = 8.0e-10
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 577 KPLNFLVIDEAAQLKESESTIPLQLSGIKHA---VLFGDECQLPAMVESKVSDEACFGRS 633
+ ++ ++DEA+Q+ T+P+ L I+ A VL GD QLP +V+++ + + S
Sbjct: 1275 RTFDYCIVDEASQI-----TLPICLGPIRMARTFVLVGDHNQLPPLVQNEEARKGGLDVS 1329
Query: 634 LFEXXXXXX-XXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGP 690
LF+ QYRM + N YE H E+ K +P P
Sbjct: 1330 LFKLLSDTHPDSVVNLEHQYRMCEDVMALSNELIYEG--HLKCGTEELRLRKLDIPFP 1385
Score = 63 (27.2 bits), Expect = 8.0e-10, Sum P(4) = 8.0e-10
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESV 283
L+ G PGTGKT T++ ++ L++ L+ + T A+ + ++KL +S+
Sbjct: 1169 LVLGMPGTGKTTTIAHIIRALIRQGKSVLLTSYTHSAVDNI---LLKLKGDSI 1218
Score = 39 (18.8 bits), Expect = 8.0e-10, Sum P(4) = 8.0e-10
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 1163 KSSTIGGKFATEGSLIDTDDIDD 1185
K + IG K T+G I D ++D
Sbjct: 1661 KQAKIGAKMLTKGKPILRDILND 1683
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 175 (66.7 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 83/321 (25%), Positives = 150/321 (46%)
Query: 521 CHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYML-HSVAMKPL 579
C+ +RK+ + E + L D K +K A + T + + + H +
Sbjct: 996 CYRHIRKIFTQLEEFRAFELLRSGL--DRSKYLLVKEAKIIAMTCTHAALKRHDLVELGF 1053
Query: 580 NF--LVIDEAAQLKESESTIPLQL-------SGIKHAVLFGDECQLPAMVESKVSDE-AC 629
+ ++++EAAQ+ E E+ IPL L S +K ++ GD QLP ++++ + +
Sbjct: 1054 KYDNILMEEAAQILEIETFIPLLLQNPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1113
Query: 630 FGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENK-IHDSPTVEKRSYEKRFLP 688
+SLF Q R S+ N Y + K + + P V+ + + P
Sbjct: 1114 MEQSLFTRFVRLGVPTVDLDAQGRARASLC---NLYNWRYKQLGNLPHVQLQPEFRTPNP 1170
Query: 689 GPMYGPYSFINV--FGG--REEFIEHSCRNMVEV--SVVMKILLNLYKGWINSKEKLSIG 742
G + + INV F G E + +N+ E SV + + + L G+ E++SI
Sbjct: 1171 GFTFD-FQLINVEDFNGVGESEPNPYFYQNLAEAEYSVALYMYMRLL-GY--PAERISI- 1225
Query: 743 IVSPYIAQVAAIQEKLGSKYVNSAGFAV--KVMSVDGFQGGEEDIIIISTVRSNNGGSIG 800
++ Y Q I++ + + +++ F KV +VD FQG + D II+S VR+ ++G
Sbjct: 1226 -LTTYNGQKHLIRDVIHQRCASNSFFGQPSKVTTVDRFQGQQNDYIILSLVRTK---AVG 1281
Query: 801 FISNPRRVNVALTRARHCLWI 821
+ + RR+ VA++RAR L+I
Sbjct: 1282 HLRDVRRLVVAMSRARLGLYI 1302
Score = 72 (30.4 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKF---RTLVCTPTIVAIKELASRVVKL 278
++ GPPGTGKT V++ ++ L F RTL+ T + A+ +L +++ L
Sbjct: 819 MVVGPPGTGKTN-VAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMAL 868
Score = 52 (23.4 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 33 LEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVFP-LLEETRAN-LMSGMEKISNAPFAQ- 89
+E+++ ++ K K QY E+F++P E N M + I N F +
Sbjct: 46 IEEVYQNEILKSKFSIRKIMLLEFSQYLENFLWPNYTPEASTNSYMMSICCIVNEKFREN 105
Query: 90 VVAFE 94
V A+E
Sbjct: 106 VPAWE 110
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 166 (63.5 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 59/158 (37%), Positives = 83/158 (52%)
Query: 694 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKGW-------INSKEKLSIGIVS 745
P F V G E E S N E+ VV++ L L + I+ KE IGI+S
Sbjct: 772 PIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKE---IGIIS 828
Query: 746 PYIAQVAAIQEKLGSK-----YVNSAGFAVKVMSVDGFQGGEEDIIIISTVRS------- 793
PY QV I+ + SK + G +KV SV+ FQG E +I+ISTVRS
Sbjct: 829 PYRKQVEKIRLAITSKDPVLRALPDIG-QLKVGSVEEFQGQERRVILISTVRSCSEYLQL 887
Query: 794 NNGGSIGFISNPRRVNVALTRARHCLWILGNERTLTRN 831
+ +GF+ NP+R+NVALTRA+ L ++GN L+++
Sbjct: 888 DQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKD 925
Score = 135 (52.6 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 55/158 (34%), Positives = 77/158 (48%)
Query: 652 YRMHPSISFFPNSYFYEN--KIHDSPTVEKRSYEKRFLPGPMYG-PYSFINVFGGRE-EF 707
YR H +I PN FY++ K ++ + R++ + P G P F V G E E
Sbjct: 727 YRSHKAILKVPNELFYDSELKAYEGSEPDVRNFYCTWEELPNRGVPIIFHGVCGEDEREA 786
Query: 708 IEHSCRNMVEVSVVMKILLNLYKGW-------INSKEKLSIGIVSPYIAQVAAIQEKLGS 760
S N E+ VV++ L L + I+ KE IGI+SPY QV I+ + S
Sbjct: 787 KSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKE---IGIISPYRKQVEKIRLAITS 843
Query: 761 K-----YVNSAGFAVKVMSVDGFQGGEEDIIIISTVRS 793
K + G +KV SV+ FQG E +I+ISTVRS
Sbjct: 844 KDPVLRALPDIG-QLKVGSVEEFQGQERRVILISTVRS 880
Score = 75 (31.5 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 187 KKSLFVIFLINRTSNRRIWNSLHMKGNLKIIKELLCTDSGATVQLIWGPPGTGKTKT-VS 245
++SLF R +R++ + + + +K ++ S LI+GPPGTGKT T V
Sbjct: 472 QRSLFTGIFQPRWFDRKVEAN---EEQCQAVKHIVTGMSRPAPYLIFGPPGTGKTVTLVE 528
Query: 246 MLLVILLQMK-FRTLVCTPTIVAIKELASRVV 276
+ + K R L C P+ A L R++
Sbjct: 529 AIKQVWSCFKDARILACAPSNSAADLLCQRLL 560
Score = 44 (20.5 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 1617 KQLYVAITRTRQRLWIWENKEEFSKPMFDYWKKRFLVQVRRLDDSLAQAMQVASSPEE 1674
K+L VA+TR + L + N SK +W RFL R D+ + P E
Sbjct: 900 KRLNVALTRAKALLIVVGNAAVLSKD--PHWH-RFLRYCR--DEGAYRGYPYEEEPPE 952
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 113 (44.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ +
Sbjct: 5 HPIFSRKTFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGM 62
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKI 671
SLF+ +QYRM+ I N YE K+
Sbjct: 63 SESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKL 103
Score = 111 (44.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 33/108 (30%), Positives = 55/108 (50%)
Query: 694 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQV 751
P F+N E+ + N+ E +V+ + K N +IGI++PY Q+
Sbjct: 148 PVCFLNTDKVPAPEQVEKGGVSNITEAKLVVYLTSIFVKAGCNP---CNIGIIAPYRQQL 204
Query: 752 AAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSI 799
I + L +S G V+V +VD +QG ++ II++S VRSN G++
Sbjct: 205 KVINDLLSH---SSVGM-VEVNTVDKYQGRDKSIILVSFVRSNRDGTV 248
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 168 (64.2 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 75/253 (29%), Positives = 119/253 (47%)
Query: 555 LKRASLFFSTASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQLSGIK--HAVLF 610
++R + T S+S L + ++P F +++DEAAQ E E+ +PL L+ +K VL
Sbjct: 755 VERHRVVVVTLSTSQYLCQLDLEPGIFTHILLDEAAQAMECETIMPLALA-VKSTRVVLA 813
Query: 611 GDECQLPAMVESKVSDEACFGRSLFEXXXXXXXXXXXXXI----QYRMHPSISFFPNSYF 666
GD QL V S+ + E SL + I YR H +I + + F
Sbjct: 814 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPSEYPCRILLCENYRSHEAIINYTSDLF 873
Query: 667 YENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKIL 725
YE K+ S K+ K F Y P +F G +E + N EV +++ +
Sbjct: 874 YEGKLMASG---KQPPHKDF-----Y-PLTFFTARGEDVQEKNSTAYYNNAEVFEIVERV 924
Query: 726 LNLYKGWINSKEKL---SIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGE 782
+ K W S KL SIG+VSPY QV I+ +L K ++ +V++V QG +
Sbjct: 925 EEMRKKWPVSWGKLEEGSIGVVSPYADQVFRIRAELRKKRMSEVSVE-RVLNV---QGKQ 980
Query: 783 EDIIIISTVRSNN 795
++ +STVR+ +
Sbjct: 981 FRVLFLSTVRTRH 993
Score = 70 (29.7 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 200 SNRRIWNS-LHMKGNLKIIKELLCTDSGATVQL----IWGPPGTGKTKTVSMLLV-ILLQ 253
S R W+ L + N K + +L + ++ L I GP GTGKT T++ + IL Q
Sbjct: 622 SPNRQWDEQLDPRLNAKQKEAILAITTPLSINLPPVLIIGPYGTGKTFTLAQAVKHILKQ 681
Query: 254 MKFRTLVCT 262
+ R L+CT
Sbjct: 682 PESRVLICT 690
Score = 63 (27.2 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLT---RNRSVWKALV 839
GF+SN + +N A+TRA+ + ++G+ L R R W+ +
Sbjct: 1019 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWETFI 1061
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 167 (63.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 63/188 (33%), Positives = 89/188 (47%)
Query: 694 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKGWINS-KEKLS---IGIVSPYI 748
P F V G E E S N E + V L L K +LS +G++SPY
Sbjct: 775 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSVGVISPYR 834
Query: 749 AQVAAIQE---KLGSKYVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGG------- 797
QV I+ KL + +KV SV+ FQG E +I+ISTVRS+
Sbjct: 835 KQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 894
Query: 798 SIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ----CFFNADD 853
++GF+ NP+R NVA+TRA+ L ++GN L + WKA ++ K C F A
Sbjct: 895 NLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKAFLEFCKENGGYTGCPFPAKL 953
Query: 854 DKDLGKSI 861
D G+++
Sbjct: 954 DLQQGQNL 961
Score = 143 (55.4 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 53/153 (34%), Positives = 70/153 (45%)
Query: 652 YRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYG-PYSFINVFGGRE-EFIE 709
YR HP+I PN +YE ++ V R R+ P G P F V G E E
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWEGLPRQGFPIIFHGVMGKDEREGNS 791
Query: 710 HSCRNMVEVSVVMKILLNLYKGWINS-KEKLS---IGIVSPYIAQVAAIQE---KLGSKY 762
S N E + V L L K +LS +G++SPY QV I+ KL +
Sbjct: 792 PSFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSVGVISPYRKQVEKIRHCITKLDKEL 851
Query: 763 VNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSN 794
+KV SV+ FQG E +I+ISTVRS+
Sbjct: 852 RGLDDIKDLKVGSVEEFQGQERSVILISTVRSS 884
Score = 73 (30.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 214 LKIIKELLCTDSGATVQLIWGPPGTGKTKT-VSMLLVILLQM-KFRTLVCTPTIVAIKEL 271
L+ +K ++ + +I+GPPGTGKT T V + ++ + K L C P+ L
Sbjct: 504 LQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLL 563
Query: 272 ASRVVKLVKESVER 285
R+ + S+ R
Sbjct: 564 CQRLRVHLPSSIYR 577
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 167 (63.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 65/250 (26%), Positives = 107/250 (42%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + K +F ++DEA+Q+ + PL S K VL GD QLP +V++ + +
Sbjct: 766 HPIFVQKQFDFCIVDEASQISQPICLGPLFCS--KRFVLVGDHQQLPPLVQNSEARDLGM 823
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIH-----------DSPTVEK 679
SLF+ +QYRM+ I N YE K+ + P ++
Sbjct: 824 SESLFKRLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNLKM 883
Query: 680 RSYE-----KRFLPGPMYG--PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILLNLYK 730
E K +L + P F+N E + N+ E +V + K
Sbjct: 884 LKLEFADASKTWLKEVLEPDKPVCFLNTEKVPAPEHTEKGGVCNVTEAKLVFFLTTLFIK 943
Query: 731 GWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIIST 790
+ IGI+SPY Q+ I + + N V+V ++D +QG ++ III+S
Sbjct: 944 AGCRPSD---IGIISPYRHQLKVITDLMARLKENR----VEVNTIDKYQGRDKSIIIVSF 996
Query: 791 VRSNNGGSIG 800
VR++N ++G
Sbjct: 997 VRNSNDENLG 1006
Score = 73 (30.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 663 LIVGMPGTGKTTTICALVRILSACGFSVLLTSFTHTAVDNILLKLAK 709
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 165 (63.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 75/270 (27%), Positives = 113/270 (41%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + K +F ++DEA+Q+ + PL S K VL GD QLP +V++ + +
Sbjct: 717 HPIFVQKQFDFCIVDEASQISQPICLGPLFCS--KRFVLVGDHQQLPPLVQNSEARDLGM 774
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGP 690
SLF+ +QYRM+ I N YE K+ EK S LP
Sbjct: 775 SESLFKRLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGS--EKVSNATANLP-- 830
Query: 691 MYGPYSFINVFGGREEFIEHSCRNMVEVSVVMK--ILLNLYKGWINSKEKLSIGIVSPYI 748
N+ + EF + S + EV K LN K + IGI+SPY
Sbjct: 831 --------NLKMLKLEFADASKTWLKEVLEPDKPVCFLNTEKAGCRPSD---IGIISPYR 879
Query: 749 AQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRV 808
Q+ I + + N + G + II+ SN+ + + RR+
Sbjct: 880 HQLKVITDLMARLKENRVEVNT-IDKYQGRD--KSIIIVSFVRNSNDENLGALLKDWRRL 936
Query: 809 NVALTRARHCLWILGNERTLTRNRSVWKAL 838
NVA+TRA+H L ++G +L R + K L
Sbjct: 937 NVAITRAKHKLIMVGCVPSLRRYPPLEKLL 966
Score = 73 (30.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 614 LIVGMPGTGKTTTICALVRILSACGFSVLLTSFTHTAVDNILLKLAK 660
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 165 (63.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 63/189 (33%), Positives = 92/189 (48%)
Query: 694 PYSFINVFGGRE-EFIEHSCRNMVEVSVV---MKILL--NLYKGWINSKEKLSIGIVSPY 747
P F V G E E S N E + V +K+LL + KG + S+G++SPY
Sbjct: 755 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPR-SVGVISPY 813
Query: 748 IAQVAAIQE---KLGSKYVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGG------ 797
QV I+ KL + +KV SV+ FQG E +I+ISTVRS+
Sbjct: 814 RKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLD 873
Query: 798 -SIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ----CFFNAD 852
++GF+ NP+R NVA+TRA+ L ++GN L + WK ++ K C F A
Sbjct: 874 FNLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKVFLEFCKENGGYTGCPFPAK 932
Query: 853 DDKDLGKSI 861
D G+++
Sbjct: 933 LDLQQGQNL 941
Score = 141 (54.7 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 71/243 (29%), Positives = 105/243 (43%)
Query: 575 AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSL 634
+M+P + + I ++KE+++ P G VL GD QL ++ S ++ + G SL
Sbjct: 630 SMEPESLVAIAGLMEVKETDN--P---GG--QLVLAGDPRQLGPVLRSPLTQKHGLGYSL 682
Query: 635 FEXXXXXXXXXXXXXI------------QYRMHPSISFFPNSYFYENKIHDSPTVEKRSY 682
E YR HP+I PN +YE ++ V R
Sbjct: 683 LERLLTYNALYKKGSNGYNPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRER 742
Query: 683 EKRFLPGPMYG-PYSFINVFGGRE-EFIEHSCRNMVEVSVV---MKILL--NLYKGWINS 735
+ P G P F V G E E S N E + V +K+LL + KG
Sbjct: 743 FCHWEGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARL 802
Query: 736 KEKLSIGIVSPYIAQVAAIQE---KLGSKYVNSAGFA-VKVMSVDGFQGGEEDIIIISTV 791
+ S+G++SPY QV I+ KL + +KV SV+ FQG E +I+ISTV
Sbjct: 803 SPR-SVGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTV 861
Query: 792 RSN 794
RS+
Sbjct: 862 RSS 864
Score = 72 (30.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 214 LKIIKELLCTDSGATVQLIWGPPGTGKTKT-VSMLLVILLQM-KFRTLVCTPTIVAIKEL 271
L+ +K ++ + +I+GPPGTGKT T V + ++ + K L C P+ L
Sbjct: 484 LQAMKYIIMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLL 543
Query: 272 ASRVVKLVKESVER 285
R+ + S+ R
Sbjct: 544 CQRLRVHLPSSIYR 557
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 165 (63.1 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 63/189 (33%), Positives = 92/189 (48%)
Query: 694 PYSFINVFGGRE-EFIEHSCRNMVEVSVV---MKILL--NLYKGWINSKEKLSIGIVSPY 747
P F V G E E S N E + V +K+LL + KG + S+G++SPY
Sbjct: 775 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPR-SVGVISPY 833
Query: 748 IAQVAAIQE---KLGSKYVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGG------ 797
QV I+ KL + +KV SV+ FQG E +I+ISTVRS+
Sbjct: 834 RKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLD 893
Query: 798 -SIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ----CFFNAD 852
++GF+ NP+R NVA+TRA+ L ++GN L + WK ++ K C F A
Sbjct: 894 FNLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKVFLEFCKENGGYTGCPFPAK 952
Query: 853 DDKDLGKSI 861
D G+++
Sbjct: 953 LDLQQGQNL 961
Score = 141 (54.7 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 71/243 (29%), Positives = 105/243 (43%)
Query: 575 AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSL 634
+M+P + + I ++KE+++ P G VL GD QL ++ S ++ + G SL
Sbjct: 650 SMEPESLVAIAGLMEVKETDN--P---GG--QLVLAGDPRQLGPVLRSPLTQKHGLGYSL 702
Query: 635 FEXXXXXXXXXXXXXI------------QYRMHPSISFFPNSYFYENKIHDSPTVEKRSY 682
E YR HP+I PN +YE ++ V R
Sbjct: 703 LERLLTYNALYKKGSNGYNPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRER 762
Query: 683 EKRFLPGPMYG-PYSFINVFGGRE-EFIEHSCRNMVEVSVV---MKILL--NLYKGWINS 735
+ P G P F V G E E S N E + V +K+LL + KG
Sbjct: 763 FCHWEGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARL 822
Query: 736 KEKLSIGIVSPYIAQVAAIQE---KLGSKYVNSAGFA-VKVMSVDGFQGGEEDIIIISTV 791
+ S+G++SPY QV I+ KL + +KV SV+ FQG E +I+ISTV
Sbjct: 823 SPR-SVGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTV 881
Query: 792 RSN 794
RS+
Sbjct: 882 RSS 884
Score = 72 (30.4 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 214 LKIIKELLCTDSGATVQLIWGPPGTGKTKT-VSMLLVILLQM-KFRTLVCTPTIVAIKEL 271
L+ +K ++ + +I+GPPGTGKT T V + ++ + K L C P+ L
Sbjct: 504 LQAMKYIIMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLL 563
Query: 272 ASRVVKLVKESVER 285
R+ + S+ R
Sbjct: 564 CQRLRVHLPSSIYR 577
Score = 48 (22.0 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 54 RSVGQYFESFVFPL---LEETRANLMSGMEKISNAPFAQVVAFEDSKP-YGSMLYDVKV 108
R GQ FESF+ +E R L + + N F ++F P + SMLY +K+
Sbjct: 11 RETGQRFESFLVERGLDMETDRERLRT----VYNWDFK--ISFGTPAPGFSSMLYGMKI 63
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 161 (61.7 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 62/188 (32%), Positives = 88/188 (46%)
Query: 694 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYK-GWINSKEKLS---IGIVSPYI 748
P F V G E E S N E + V L L K +LS +G++SPY
Sbjct: 775 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRSVGVISPYR 834
Query: 749 AQVAAIQ---EKLGSKYVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGG------- 797
QV I+ KL + +KV SV+ FQG E +I+ISTVRS+
Sbjct: 835 KQVEKIRYCITKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 894
Query: 798 SIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ----CFFNADD 853
++GF+ NP+R NVA+TRA+ L ++GN L + WK ++ K C F A
Sbjct: 895 NLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKVFLEFCKENGGYTGCPFPAKL 953
Query: 854 DKDLGKSI 861
D G+++
Sbjct: 954 DLQQGQNL 961
Score = 131 (51.2 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 52/154 (33%), Positives = 71/154 (46%)
Query: 652 YRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRF--LPGPMYGPYSFINVFGGRE-EFI 708
YR HP+I PN +Y+ ++ V R R+ LP + P F V G E E
Sbjct: 732 YRSHPTILDVPNRLYYDGELQACADVVDRERFCRWEGLPRQDF-PIIFHGVMGKDEREGN 790
Query: 709 EHSCRNMVEVSVVMKILLNLYK-GWINSKEKLS---IGIVSPYIAQVAAIQ---EKLGSK 761
S N E + V L L K +LS +G++SPY QV I+ KL +
Sbjct: 791 SPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDKQ 850
Query: 762 YVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSN 794
+KV SV+ FQG E +I+ISTVRS+
Sbjct: 851 LRGLDDIKDLKVGSVEEFQGQERSVILISTVRSS 884
Score = 73 (30.8 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 214 LKIIKELLCTDSGATVQLIWGPPGTGKTKT-VSMLLVILLQM-KFRTLVCTPTIVAIKEL 271
L+ +K ++ + +I+GPPGTGKT T V + ++ + K L C P+ L
Sbjct: 504 LQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLL 563
Query: 272 ASRVVKLVKESVER 285
R+ + S+ R
Sbjct: 564 CQRLRVHLPSSIYR 577
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 164 (62.8 bits), Expect = 6.9e-09, Sum P(3) = 6.9e-09
Identities = 64/189 (33%), Positives = 92/189 (48%)
Query: 694 PYSFINVFGGRE-EFIEHSCRNMVEVSVV---MKILL--NLYKGWINSKEKLSIGIVSPY 747
P F V G E E S N E + V +K+LL + KG + S+G++SPY
Sbjct: 775 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPR-SVGVISPY 833
Query: 748 IAQVAAIQ---EKLGSKYVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGG------ 797
QV I+ KL + +KV SV+ FQG E +I+ISTVRS+
Sbjct: 834 RKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLD 893
Query: 798 -SIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ----CFFNAD 852
++GF+ NP+R NVA+TRA+ L I+GN L + WK ++ K C F A
Sbjct: 894 FNLGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPD-WKVFLEFCKENGGYTGCPFPAK 952
Query: 853 DDKDLGKSI 861
D G+++
Sbjct: 953 LDLQQGQNL 961
Score = 145 (56.1 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 54/154 (35%), Positives = 74/154 (48%)
Query: 652 YRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYG-PYSFINVFGGRE-EFIE 709
YR HP+I PN +YE ++ V R R+ P G P F V G E E
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNS 791
Query: 710 HSCRNMVEVSVV---MKILL--NLYKGWINSKEKLSIGIVSPYIAQVAAIQ---EKLGSK 761
S N E + V +K+LL + KG + S+G++SPY QV I+ KL +
Sbjct: 792 PSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPR-SVGVISPYRKQVEKIRYCITKLDRE 850
Query: 762 YVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSN 794
+KV SV+ FQG E +I+ISTVRS+
Sbjct: 851 LRGLDDIKDLKVGSVEEFQGQERSVILISTVRSS 884
Score = 70 (29.7 bits), Expect = 6.9e-09, Sum P(3) = 6.9e-09
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 214 LKIIKELLCTDSGATVQLIWGPPGTGKTKT-VSMLLVILLQM-KFRTLVCTPTIVAIKEL 271
L+ ++ ++ + +I+GPPGTGKT T V + ++ + K L C P+ L
Sbjct: 504 LQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLL 563
Query: 272 ASRVVKLVKESVER 285
R+ + S+ R
Sbjct: 564 CQRLRVHLPSSIYR 577
Score = 50 (22.7 bits), Expect = 6.9e-09, Sum P(3) = 6.9e-09
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 54 RSVGQYFESFVFPL---LEETRANLMSGMEKISNAPFAQVVAFEDSKP-YGSMLYDVKV 108
R GQ FESF+ +E R L + I N F ++F P + SMLY +K+
Sbjct: 11 REAGQCFESFLVVRGLDMETDRERLRT----IYNRDFK--ISFGTPAPGFSSMLYGMKI 63
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 158 (60.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 43/133 (32%), Positives = 73/133 (54%)
Query: 694 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQV 751
P F+N E+ + N+ E +++ + K + + IGI++PY Q+
Sbjct: 891 PVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSD---IGIIAPYRQQL 947
Query: 752 AAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIG-FISNPRRVNV 810
I + L S G V+V +VD +QG ++ I+++S VRSN G++G + + RR+NV
Sbjct: 948 KIINDLLA----RSIGM-VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNV 1002
Query: 811 ALTRARHCLWILG 823
A+TRA+H L +LG
Sbjct: 1003 AITRAKHKLILLG 1015
Score = 140 (54.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 64/252 (25%), Positives = 112/252 (44%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ +
Sbjct: 748 HPIFSRKIFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGM 805
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIH---D---SPTVEKRSYEK 684
SLF+ +QYRM+ I N YE K+ D + + R ++
Sbjct: 806 SESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKD 865
Query: 685 RFLPGPMYGPYSFINVFGGREEFIEHSC-RNMVEVSVVMKILLNLYKGWINS--KEKLSI 741
L Y YS G E C N +V ++ KG +++ + KL +
Sbjct: 866 VKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQV----EKGGVSNVTEAKLIV 921
Query: 742 GIVSPYIAQ---------VAAIQEKLGSKYVNS----AGFAVKVMSVDGFQGGEEDIIII 788
+ S ++ +A +++L K +N + V+V +VD +QG ++ I+++
Sbjct: 922 FLTSIFVKAGCSPSDIGIIAPYRQQL--KIINDLLARSIGMVEVNTVDKYQGRDKSIVLV 979
Query: 789 STVRSNNGGSIG 800
S VRSN G++G
Sbjct: 980 SFVRSNKDGTVG 991
Score = 73 (30.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 645 LIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAK 691
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1612 LCSELKQLYVAITRTRQRL 1630
L + ++L VAITR + +L
Sbjct: 993 LLKDWRRLNVAITRAKHKL 1011
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 159 (61.0 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 62/188 (32%), Positives = 87/188 (46%)
Query: 694 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYK-GWINSKEKLS---IGIVSPYI 748
P F V G E E S N E + V L L K +LS +G++SPY
Sbjct: 776 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLRQLLAPSSKKGKARLSPRSVGVISPYR 835
Query: 749 AQVAAIQ---EKLGSKYVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGG------- 797
QV I+ KL + +KV SV+ FQG E +I+ISTVRS+
Sbjct: 836 KQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 895
Query: 798 SIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ----CFFNADD 853
++GF+ NP+R NVA+TRA+ L ++GN L + WK ++ K C F A
Sbjct: 896 NLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKTFLEFCKENGGYTGCPFPAKL 954
Query: 854 DKDLGKSI 861
D G+ +
Sbjct: 955 DLQQGQDL 962
Score = 138 (53.6 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 52/153 (33%), Positives = 70/153 (45%)
Query: 652 YRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYG-PYSFINVFGGRE-EFIE 709
YR HP+I PN +Y+ ++ V R R+ P G P F V G E E
Sbjct: 733 YRSHPTILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVMGKDEREGNS 792
Query: 710 HSCRNMVEVSVVMKILLNLYK-GWINSKEKLS---IGIVSPYIAQVAAIQ---EKLGSKY 762
S N E + V L L K +LS +G++SPY QV I+ KL +
Sbjct: 793 PSFFNPEEAATVTSYLRQLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDREL 852
Query: 763 VNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSN 794
+KV SV+ FQG E +I+ISTVRS+
Sbjct: 853 RGLDDIKDLKVGSVEEFQGQERSVILISTVRSS 885
Score = 76 (31.8 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 214 LKIIKELLCTDSGATVQLIWGPPGTGKTKT-VSMLLVILLQM-KFRTLVCTPTIVAIKEL 271
L+ +K ++ + +I+GPPGTGKT T V + ++ + K L CTP+ L
Sbjct: 505 LQAMKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACTPSNSGADLL 564
Query: 272 ASRVVKLVKESVER 285
R+ + S+ R
Sbjct: 565 CQRLRVHLPSSIYR 578
Score = 46 (21.3 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 54 RSVGQYFESFVFPLLEETRANLMSGMEK---ISNAPFAQVVAFEDSKP-YGSMLYDVKV 108
R GQ FESF L E +L + E+ I N F ++ P + SMLY +K+
Sbjct: 11 RETGQGFESF----LAERGLDLETDRERLRAIYNRDFKP--SYGTPAPGFSSMLYGMKI 63
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 158 (60.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 43/133 (32%), Positives = 73/133 (54%)
Query: 694 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQV 751
P F+N E+ + N+ E +++ + K + + IGI++PY Q+
Sbjct: 977 PVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSD---IGIIAPYRQQL 1033
Query: 752 AAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIG-FISNPRRVNV 810
I + L S G V+V +VD +QG ++ I+++S VRSN G++G + + RR+NV
Sbjct: 1034 KIINDLLA----RSIGM-VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNV 1088
Query: 811 ALTRARHCLWILG 823
A+TRA+H L +LG
Sbjct: 1089 AITRAKHKLILLG 1101
Score = 140 (54.3 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 64/252 (25%), Positives = 112/252 (44%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ +
Sbjct: 834 HPIFSRKIFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGM 891
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIH---D---SPTVEKRSYEK 684
SLF+ +QYRM+ I N YE K+ D + + R ++
Sbjct: 892 SESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKD 951
Query: 685 RFLPGPMYGPYSFINVFGGREEFIEHSC-RNMVEVSVVMKILLNLYKGWINS--KEKLSI 741
L Y YS G E C N +V ++ KG +++ + KL +
Sbjct: 952 VKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQV----EKGGVSNVTEAKLIV 1007
Query: 742 GIVSPYIAQ---------VAAIQEKLGSKYVNS----AGFAVKVMSVDGFQGGEEDIIII 788
+ S ++ +A +++L K +N + V+V +VD +QG ++ I+++
Sbjct: 1008 FLTSIFVKAGCSPSDIGIIAPYRQQL--KIINDLLARSIGMVEVNTVDKYQGRDKSIVLV 1065
Query: 789 STVRSNNGGSIG 800
S VRSN G++G
Sbjct: 1066 SFVRSNKDGTVG 1077
Score = 73 (30.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVK 277
LI G PGTGKT T+ L+ IL F L+ + T A+ + ++ K
Sbjct: 731 LIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAK 777
Score = 38 (18.4 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1612 LCSELKQLYVAITRTRQRL 1630
L + ++L VAITR + +L
Sbjct: 1079 LLKDWRRLNVAITRAKHKL 1097
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 159 (61.0 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 62/188 (32%), Positives = 87/188 (46%)
Query: 694 PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYK-GWINSKEKLS---IGIVSPYI 748
P F V G E E S N E + V L L K +LS +G++SPY
Sbjct: 776 PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRNVGVISPYR 835
Query: 749 AQVAAIQ---EKLGSKYVNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSNNGG------- 797
QV I+ KL + +KV SV+ FQG E +I+ISTVRS+
Sbjct: 836 KQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDF 895
Query: 798 SIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKARQ----CFFNADD 853
++GF+ NP+R NVA+TRA+ L ++GN L + WK ++ K C F A
Sbjct: 896 NLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPD-WKTFLEFCKENGGYTGCPFPAKL 954
Query: 854 DKDLGKSI 861
D G+ +
Sbjct: 955 DLQQGQDL 962
Score = 138 (53.6 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 52/153 (33%), Positives = 70/153 (45%)
Query: 652 YRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYG-PYSFINVFGGRE-EFIE 709
YR HP+I PN +Y+ ++ V R R+ P G P F V G E E
Sbjct: 733 YRSHPTILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVMGKDEREGNS 792
Query: 710 HSCRNMVEVSVVMKILLNLYK-GWINSKEKLS---IGIVSPYIAQVAAIQ---EKLGSKY 762
S N E + V L L K +LS +G++SPY QV I+ KL +
Sbjct: 793 PSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRNVGVISPYRKQVEKIRYCITKLDREL 852
Query: 763 VNSAGFA-VKVMSVDGFQGGEEDIIIISTVRSN 794
+KV SV+ FQG E +I+ISTVRS+
Sbjct: 853 RGLDDIKDLKVGSVEEFQGQERSVILISTVRSS 885
Score = 71 (30.1 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 214 LKIIKELLCTDSGATVQLIWGPPGTGKTKT-VSMLLVILLQM-KFRTLVCTPTIVAIKEL 271
L+ +K ++ + +I+GPPGTGKT T V + ++ + K L C P+ L
Sbjct: 505 LQAMKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLL 564
Query: 272 ASRVVKLVKESVER 285
R+ + S+ R
Sbjct: 565 CQRLRVHLPSSIYR 578
Score = 46 (21.3 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 54 RSVGQYFESFVFPLLEETRANLMSGMEK---ISNAPFAQVVAFEDSKP-YGSMLYDVKV 108
R GQ FESF L E +L + E+ I N F ++ P + SMLY +K+
Sbjct: 11 RETGQRFESF----LAERGLDLETDRERLRTIYNHDFKP--SYGTPAPGFSSMLYGMKI 63
Score = 37 (18.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 374 KEKECGKEADASDVEIKPFLEFVRERFKCIINGD 407
K +E G+ ++ E LE RER + I N D
Sbjct: 9 KLRETGQRFESFLAERGLDLETDRERLRTIYNHD 42
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 156 (60.0 bits), Expect = 7.2e-08, Sum P(4) = 7.2e-08
Identities = 71/243 (29%), Positives = 113/243 (46%)
Query: 564 TASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQLSGIK-HAVLFGDECQLPAMV 620
T ++S L + ++P F +++DEAAQ E E+ +PL L+ VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 831
Query: 621 ESKVSDEACFGRSLFEXXXXXXXXXXXXXI----QYRMHPSISFFPNSYFYENKIHDSPT 676
S+ + E SL + I YR H +I + + FYE K+ S
Sbjct: 832 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG- 890
Query: 677 VEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKGWINS 735
K+ K F Y P +F G +E + N EV V++ + L + W +
Sbjct: 891 --KQPAHKDF-----Y-PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 942
Query: 736 KEKL---SIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVR 792
KL SIG+V+PY QV I+ +L K ++ +V++V QG + ++ +STVR
Sbjct: 943 WGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVE-RVLNV---QGKQFRVLFLSTVR 998
Query: 793 SNN 795
+ +
Sbjct: 999 TRH 1001
Score = 69 (29.3 bits), Expect = 7.2e-08, Sum P(4) = 7.2e-08
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 200 SNRRIWNS-LHMKGNLKIIKELLCTDSGATVQL----IWGPPGTGKTKTVSMLLVILLQM 254
S R W+ L + N K + +L + +QL I GP GTGKT T++ + +LQ
Sbjct: 629 SPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ 688
Query: 255 K--FRTLVCT 262
+ R L+CT
Sbjct: 689 QETSRILICT 698
Score = 62 (26.9 bits), Expect = 7.2e-08, Sum P(4) = 7.2e-08
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLT---RNRSVWKALV 839
GF+SN + +N A+TRA+ + ++G+ L R R W+ +
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1069
Score = 37 (18.1 bits), Expect = 7.2e-08, Sum P(4) = 7.2e-08
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1603 SFNEVKHNILCSELKQLYV 1621
+F ++K + ELK+ YV
Sbjct: 1082 TFEQIKAQLEALELKKTYV 1100
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 158 (60.7 bits), Expect = 9.0e-08, Sum P(4) = 9.0e-08
Identities = 72/243 (29%), Positives = 113/243 (46%)
Query: 564 TASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQLSGIK-HAVLFGDECQLPAMV 620
T S+S L + ++P F +++DEAAQ E E+ +PL L+ VL GD QL V
Sbjct: 771 TLSTSQYLCQLDLEPGFFTHVLLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 621 ESKVSDEACFGRSLFEXXXXXXXXXXXXXI----QYRMHPSISFFPNSYFYENKIHDSPT 676
S+ + E SL + I YR H +I + + FYE K+ S
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG- 889
Query: 677 VEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKGWINS 735
K+ K F Y P +F G +E + N EV V++ + L + W +
Sbjct: 890 --KQPAHKDF-----Y-PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 941
Query: 736 KEKL---SIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVR 792
KL SIG+V+PY QV I+ +L K ++ +V++V QG + ++ +STVR
Sbjct: 942 WGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVE-RVLNV---QGKQFRVLFLSTVR 997
Query: 793 SNN 795
+ +
Sbjct: 998 TRH 1000
Score = 73 (30.8 bits), Expect = 9.0e-08, Sum P(4) = 9.0e-08
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 200 SNRRIWNS-LHMKGNLKIIKELLCTDSGATVQL----IWGPPGTGKTKTVSMLLV-ILLQ 253
S R W+ L + N K + +L + ++QL I GP GTGKT T++ IL Q
Sbjct: 629 SPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQLPPVLIIGPYGTGKTFTLAQAAKHILQQ 688
Query: 254 MKFRTLVCT 262
+ R L+CT
Sbjct: 689 QETRILICT 697
Score = 62 (26.9 bits), Expect = 9.0e-08, Sum P(4) = 9.0e-08
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLT---RNRSVWKALV 839
GF+SN + +N A+TRA+ + ++G+ L R R W+ +
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPVALCSIGRCRKFWERFI 1068
Score = 40 (19.1 bits), Expect = 9.0e-08, Sum P(4) = 9.0e-08
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 991 NLEVPKNWATTSNIVRFKGLADN 1013
N P++WA T++ ++ + N
Sbjct: 1819 NFPAPESWANTTSSAPYQNIPCN 1841
Score = 37 (18.1 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1603 SFNEVKHNILCSELKQLYV 1621
+F ++K + ELK+ YV
Sbjct: 1081 TFEQIKAQLEALELKKTYV 1099
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 158 (60.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/133 (32%), Positives = 73/133 (54%)
Query: 694 PYSFINV--FGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQV 751
P F+N E+ + N+ E +++ + K + + IGI++PY Q+
Sbjct: 213 PVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSD---IGIIAPYRQQL 269
Query: 752 AAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIG-FISNPRRVNV 810
I + L S G V+V +VD +QG ++ I+++S VRSN G++G + + RR+NV
Sbjct: 270 KIINDLLA----RSIGM-VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNV 324
Query: 811 ALTRARHCLWILG 823
A+TRA+H L +LG
Sbjct: 325 AITRAKHKLILLG 337
Score = 140 (54.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 64/252 (25%), Positives = 112/252 (44%)
Query: 572 HSV-AMKPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACF 630
H + + K +F ++DEA+Q+ + PL S + VL GD QLP +V ++ +
Sbjct: 70 HPIFSRKIFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGM 127
Query: 631 GRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIH---D---SPTVEKRSYEK 684
SLF+ +QYRM+ I N YE K+ D + + R ++
Sbjct: 128 SESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKD 187
Query: 685 RFLPGPMYGPYSFINVFGGREEFIEHSC-RNMVEVSVVMKILLNLYKGWINS--KEKLSI 741
L Y YS G E C N +V ++ KG +++ + KL +
Sbjct: 188 VKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQV----EKGGVSNVTEAKLIV 243
Query: 742 GIVSPYIAQ---------VAAIQEKLGSKYVNS----AGFAVKVMSVDGFQGGEEDIIII 788
+ S ++ +A +++L K +N + V+V +VD +QG ++ I+++
Sbjct: 244 FLTSIFVKAGCSPSDIGIIAPYRQQL--KIINDLLARSIGMVEVNTVDKYQGRDKSIVLV 301
Query: 789 STVRSNNGGSIG 800
S VRSN G++G
Sbjct: 302 SFVRSNKDGTVG 313
Score = 38 (18.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1612 LCSELKQLYVAITRTRQRL 1630
L + ++L VAITR + +L
Sbjct: 315 LLKDWRRLNVAITRAKHKL 333
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 162 (62.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 70/255 (27%), Positives = 122/255 (47%)
Query: 582 LVIDEAAQLKESESTIPLQLS----G---IKHAVLFGDECQLPAMVESKVSDE-ACFGRS 633
L+++E+AQ+ E E+ IP+ L G +K +L GD QLP +V++ + + +S
Sbjct: 1120 LLMEESAQILEIETFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQS 1179
Query: 634 LFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYG 693
LF Q R PS++ N + Y + + D V++ +R G Y
Sbjct: 1180 LFTRFVRLGIPYIELNAQGRARPSLAKLYN-WRYRD-LGDLSIVKEAPIFQRANAGFSY- 1236
Query: 694 PYSFINV--FGGREEFIEHSC--RNMVEVSVVMKILLNL-YKGWINSKEKLSIGIVSPYI 748
Y +NV + GR E +N E ++ + + + G+ +K I I++ Y
Sbjct: 1237 EYQLVNVPDYEGRGESTPSPWFYQNQGEAEYIVSVYIYMRLLGYPANK----ISILTTYN 1292
Query: 749 AQVAAIQEKLGSKYVNSA--GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPR 806
Q I++ + + V G KV +VD FQG + D I++S VR+ +G + + R
Sbjct: 1293 GQKLLIRDVINRRCVPYPFIGPPSKVTTVDKFQGQQNDFILLSLVRTR---FVGHLRDVR 1349
Query: 807 RVNVALTRARHCLWI 821
R+ VA++RAR L++
Sbjct: 1350 RLVVAMSRARLGLYV 1364
Score = 76 (31.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTPTIVAIKELASRVVK 277
++ GPPGTGKT T +L +L RTL+ T + A+ +L ++++
Sbjct: 884 MVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIME 932
Score = 39 (18.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 56 VGQYFESFVFPLLEETRANLMSGMEKIS--NAPFAQVVA 92
V QY E++++P + A M I N F + VA
Sbjct: 107 VSQYLENYLWPNFDPETATFEHVMSMILMINEKFRENVA 145
Score = 38 (18.4 bits), Expect = 0.00084, Sum P(3) = 0.00084
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 351 SQYHTYMENESMKQSEDINGDI-IKEKECGKEADASDVEIKPFLEFVRERFK--CII 404
+QYH + + + K +ED+ G + + KE + K LE +R+ CI+
Sbjct: 684 AQYHIDVTDIAEKGAEDVYGTFNVLMRRKPKENN-----FKAILESIRDLMNEYCIV 735
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 158 (60.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 79/288 (27%), Positives = 131/288 (45%)
Query: 580 NFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQ-LPAMVESKVSDEACFGRSLFEXX 638
++ ++DEA+Q+ S PL+ + V D+ Q L + +V E RSLF
Sbjct: 1096 DYCIVDEASQITLPVSLGPLRFAKKFVMVGDHDQLQPLVTHPDKRVKQE--LSRSLFSLL 1153
Query: 639 XXXX-XXXXXXXIQYRMHPSISFFPNSYFYENKIH-DSPTVEKRSYE-------KRFLPG 689
QYRM+ I N+ Y NK+ S V + S + F+ G
Sbjct: 1154 AKEHPDSVSHLTYQYRMNSDIMNVCNTLIYNNKLKCGSEQVAQNSLKIPHPEVLNSFI-G 1212
Query: 690 PMYGPYS-FIN-VFGGREEF----------IEHSCRNMV----EVSVVMKILLNLYKGWI 733
P S +I+ +F + +E + MV E ++ +I+ L G +
Sbjct: 1213 EDVSPDSQWIHKIFDEKNNVLFLDYDAVPAVEENVGEMVINTKEALLIQQIVNALVHGGV 1272
Query: 734 NSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRS 793
E IG++S Y AQ++ +++ L + +++++ D +QG +++ IIIS VRS
Sbjct: 1273 KEDE---IGVMSFYRAQLSVLKKNLNNLK------DLEILTADQYQGRDKECIIISLVRS 1323
Query: 794 NNGGSIG-FISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVD 840
N G + RR+NVA TRA+ L ILG+ TL+ N + K +D
Sbjct: 1324 NERKFAGDLMKEYRRLNVATTRAKTKLIILGSRFTLSTNE-LTKTFID 1370
Score = 66 (28.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKL 278
LI G PGTGKT ++ L+ +L+ + L+ + T A+ + ++ L
Sbjct: 986 LIVGMPGTGKTTVIAQLIKVLVAQRKSVLLTSYTNSAVDNILLKLKDL 1033
Score = 56 (24.8 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 27/110 (24%), Positives = 48/110 (43%)
Query: 154 VSVANVTEDENEIDTSPTYFKVNATKEIQIDVSKKSLFVIFLINRTSNRRIWNSLHMKGN 213
+ V N + D++++ Y ++ K I V L++ N IWN M
Sbjct: 399 LEVVNSSRDKSKLVVRGEYCELELEKGDVIHVIITDSARPTLVDDMHNLLIWNPDIMLSA 458
Query: 214 LKIIKELLCTDSGATVQLI-WGPPGTGKTKTVSMLLVILLQMKFRTLVCT 262
I ++L C S TV L + PGT T+ +++ ++ F+ +CT
Sbjct: 459 TTISQQLNC--SRKTVILSRYKFPGTS---TIPIIVGEIVHFIFQECICT 503
Score = 38 (18.4 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 353 YHTYMEN--ESMKQSEDINGDIIKE 375
Y Y ++ E + + ED+ G +KE
Sbjct: 746 YRKYFQHWDELISKEEDVMGRAVKE 770
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 171 (65.3 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 66/228 (28%), Positives = 108/228 (47%)
Query: 627 EACFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDS-----------P 675
E SLF+ +QYRM+ I N YE ++ + P
Sbjct: 798 ELGMSESLFKRLERNQEAVVQLTVQYRMNSQIMALSNKLVYEGRLECASDRVSNAVVKLP 857
Query: 676 TVE--------KRSYEKRFLPGPMY--GPYSFINVFGGREEFIEHSCRNMVEVSVVMKIL 725
++ + S E ++ + P F+N + +E + + + K++
Sbjct: 858 HIKTLLLELEFRESQESMWIKDVLEPSNPVCFLNT--EKIPALETEEKGGISNWIEAKLV 915
Query: 726 LNLYKGWINSKEKLS-IGIVSPYIAQVAAIQEKLGSKYVNS-AGFAVKVMSVDGFQGGEE 783
L K ++ + + S IGI++PY Q+ I S Y NS + AV+V +VD +QG ++
Sbjct: 916 FCLTKLFLKAGCRPSDIGIIAPYRQQLKVI-----SNYFNSLSASAVEVNTVDKYQGRDK 970
Query: 784 DIIIISTVRSNNGGSIG-FISNPRRVNVALTRARHCLWILGNERTLTR 830
+II+S VRSN G +G + + RR+NVALTRA+H L +LG TL+R
Sbjct: 971 SVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTLSR 1018
Score = 58 (25.5 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIV 266
LI G PGTGKT T+ L V L +K CT +V
Sbjct: 646 LIVGMPGTGKTTTICTL-VSTLHLK----TCTSCLV 676
Score = 42 (19.8 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 14/66 (21%), Positives = 30/66 (45%)
Query: 32 SLEDIFNEDLFKDKVKR--IPFSFRSVGQYFESFVFPLLEETRANLMSGMEKISNAPFAQ 89
+L + DK+++ I FS + Q+ S + ++ AN++ G+ K +
Sbjct: 578 NLSRLMENSPVSDKLRKLIIDFSKPNFVQHLSSVLPSDAKDIVANILKGLNKPQKQAMKR 637
Query: 90 VVAFED 95
V+ +D
Sbjct: 638 VLLSKD 643
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 121 (47.7 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 44/144 (30%), Positives = 73/144 (50%)
Query: 714 NMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVM 773
N E +VM +L L K + E IG+++PY AQV + KL SK ++
Sbjct: 944 NYCEAGIVMHLLRYLLK---SGYEASRIGVIAPYRAQVELFK-KLASKLDTD----LECN 995
Query: 774 SVDGFQGGEEDIIIISTVRSNNGGSIG---------FISNPRRVNVALTRARHCLWILGN 824
+VD FQG ++++II S S GG + + RR+ VA+TRA++ L +LG+
Sbjct: 996 TVDQFQGRDKNLIIYSC--SKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGD 1053
Query: 825 ERTLTRN---RSVWKALVDDAKAR 845
+ L + R ++K + D + +
Sbjct: 1054 IKCLEQYGPFRQLFKHIPDRCRLK 1077
Score = 85 (35.0 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 577 KPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFE 636
+ ++ ++DEA Q+ + T+ L VL GD QLP +V SK + + +LF+
Sbjct: 763 RQFDYCIVDEATQVLQP--TVLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQ 820
Query: 637 XXXXXXXXXXXXXIQYRMHPSISFFPNSYFY 667
+QYRM+ +I+ N Y
Sbjct: 821 RLDSEKATAVLS-LQYRMNKTITRLANELTY 850
Score = 67 (28.6 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASRVVKLVKESVERDCRDA 290
LI G PGTGKT+T+ L+ +L + L+ T A+ L R++ +
Sbjct: 656 LIKGLPGTGKTQTLVALVRLLHLLGKSVLITAQTHSAVDNLIMRLLPFGLPMMRLGSGSR 715
Query: 291 LFFPLGEILLLGNNERLKVD-SGVEEI 316
+ L EI + ERL D VEE+
Sbjct: 716 IHKQLEEI----SEERLTKDCKTVEEL 738
Score = 49 (22.3 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 293 FPLGEILLLGNNERLKVDSG----VEEIYLDYRVKR 324
F LGE +++ + RL V +G +E LD R++R
Sbjct: 529 FDLGEYVVISSTSRLAVAAGFIVSIEARRLDLRLER 564
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 156 (60.0 bits), Expect = 1.7e-07, Sum P(4) = 1.7e-07
Identities = 71/243 (29%), Positives = 113/243 (46%)
Query: 564 TASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQLSGIK-HAVLFGDECQLPAMV 620
T ++S L + ++P F +++DEAAQ E E+ +PL L+ VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 621 ESKVSDEACFGRSLFEXXXXXXXXXXXXXI----QYRMHPSISFFPNSYFYENKIHDSPT 676
S+ + E SL + I YR H +I + + FYE K+ S
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG- 889
Query: 677 VEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKGWINS 735
K+ K F Y P +F G +E + N EV V++ + L + W +
Sbjct: 890 --KQPAHKDF-----Y-PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 941
Query: 736 KEKL---SIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVR 792
KL SIG+V+PY QV I+ +L K ++ +V++V QG + ++ +STVR
Sbjct: 942 WGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVE-RVLNV---QGKQFRVLFLSTVR 997
Query: 793 SNN 795
+ +
Sbjct: 998 TRH 1000
Score = 75 (31.5 bits), Expect = 1.7e-07, Sum P(4) = 1.7e-07
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 200 SNRRIWNS-LHMKGNLKIIKELLCTDSGATVQL----IWGPPGTGKTKTVSMLLV-ILLQ 253
S R W+ L + N K + +L + ++QL I GP GTGKT T++ + IL Q
Sbjct: 629 SPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ 688
Query: 254 MKFRTLVCT 262
+ R L+CT
Sbjct: 689 QETRILICT 697
Score = 62 (26.9 bits), Expect = 1.7e-07, Sum P(4) = 1.7e-07
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLT---RNRSVWKALV 839
GF+SN + +N A+TRA+ + ++G+ L R R W+ +
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1068
Score = 37 (18.1 bits), Expect = 1.7e-07, Sum P(4) = 1.7e-07
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1603 SFNEVKHNILCSELKQLYV 1621
+F ++K + ELK+ YV
Sbjct: 1081 TFEQIKAQLEALELKKTYV 1099
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 176 (67.0 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 80/298 (26%), Positives = 137/298 (45%)
Query: 548 DLLKRFCLKRASLFFSTASSSYMLHSVAMKPLNF----LVIDEAAQLKESESTIPLQLSG 603
D + +K A + T + + + + +K L F +V++EAAQ+ E E+ IPL L
Sbjct: 1024 DRTEYLLVKEAKIIAMTCTHAALRRNELVK-LGFRYDNIVMEEAAQILEVETFIPLLLQN 1082
Query: 604 -------IKHAVLFGDECQLPAMVESKVSDE-ACFGRSLFEXXXXXXXXXXXXXIQYRMH 655
+K ++ GD QLP +V+++ + + +SLF Q R
Sbjct: 1083 PQDGHNRLKRWIMIGDHHQLPPVVQNQAFQKYSNMEQSLFARLVRLSVPNVQLDRQGRAR 1142
Query: 656 PSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINV--FGGREEF--IEHS 711
I+ + Y N + + P V+ + G + P+ FI++ F G E H
Sbjct: 1143 AQIAEL-YQWRY-NGLGNLPHVDGLPQFQNANAGFAF-PFQFIDIPDFNGHGETQPSPHF 1199
Query: 712 CRNMVEVSVVMKILLNL-YKGWINSKEKLSIGIVSPYIAQVAAIQEKLGSKYVNSA--GF 768
+N+ E + + G+ EK+SI ++ Y Q I++ + + G
Sbjct: 1200 YQNLGEAEYACALYTYMRILGY--PAEKISI--LTTYNGQAQLIRDVFQRRCDTNPLIGM 1255
Query: 769 AVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCLWILGNER 826
KV +VD +QG + D II+S V++ N IG I + RR+ VAL+RAR L++LG +
Sbjct: 1256 PAKVSTVDKYQGQQNDFIILSLVKTRN---IGHIRDVRRLVVALSRARLGLYVLGRSK 1310
Score = 66 (28.3 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTPTIVAIKELASRVVKL 278
++ GPPGTGKT ++ + RTL+ T + A+ +L +++ L
Sbjct: 824 MVVGPPGTGKTDVAVQIISNIYHNWPNQRTLIVTHSNQALNQLFEKIIAL 873
Score = 42 (19.8 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 21/81 (25%), Positives = 34/81 (41%)
Query: 409 IKEKECGKEADASDVEIKPFLEFVRERFKCIA----APLRSCIFNFC-THIPKCYIGEDN 463
+ K C K A+ EI PF F ++ + A L+ + + C HI + + D
Sbjct: 955 VTSKGCNKLAEGIISEIFPFTGFFKDIPDLFSGNNSADLK--VAHSCWRHIEQIFEKLDE 1012
Query: 464 FHVMATLISLLDSFETLLFED 484
F L + D E LL ++
Sbjct: 1013 FRAFELLRNGRDRTEYLLVKE 1033
Score = 39 (18.8 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 6/34 (17%), Positives = 16/34 (47%)
Query: 33 LEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVFP 66
++ I++ ++ K QY E++++P
Sbjct: 45 IDTIYDNEMLKTSFNSRKIMMLEFSQYLEAYLWP 78
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 162 (62.1 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 82/320 (25%), Positives = 146/320 (45%)
Query: 521 CHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLN 580
C ++K+ + E + L D K +K A + T + + + +K L
Sbjct: 979 CFRHIKKIFTQLEEFRASELLRSGL--DRSKYLLVKEAKIIAMTCTHAALKRHDLVK-LG 1035
Query: 581 F----LVIDEAAQLKESESTIPLQL-------SGIKHAVLFGDECQLPAMVESKVSDE-A 628
F ++++EAAQ+ E E+ IPL L S +K ++ GD QLP ++++ + +
Sbjct: 1036 FKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYS 1095
Query: 629 CFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLP 688
+SLF Q R S+ N + Y+N + + P V+
Sbjct: 1096 NMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLLEFSTANA 1153
Query: 689 GPMYGPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILLNL-YKGWINSKEKLSIGI 743
G +Y + INV F G G E + +N+ E V+ + + + G+ K I I
Sbjct: 1154 GLLYD-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADK----ISI 1208
Query: 744 VSPYIAQVAAIQEKLGSKYVNSA--GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGF 801
++ Y Q I++ + + ++ G KV +VD FQG + D I++S VR+ ++G
Sbjct: 1209 LTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AVGH 1265
Query: 802 ISNPRRVNVALTRARHCLWI 821
+ + RR+ VA++RAR L+I
Sbjct: 1266 LRDVRRLVVAMSRARLGLYI 1285
Score = 69 (29.3 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKF---RTLVCTPTIVAIKELASRVVKL 278
++ GPPGTGKT V++ ++ + F RTL+ T + A+ +L +++ L
Sbjct: 803 MVVGPPGTGKTD-VAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMAL 852
Score = 41 (19.5 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 33 LEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVF 65
+EDI+ +++ K + QY E++++
Sbjct: 46 IEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLW 78
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 156 (60.0 bits), Expect = 5.0e-07, Sum P(5) = 5.0e-07
Identities = 71/243 (29%), Positives = 113/243 (46%)
Query: 564 TASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQLSGIK-HAVLFGDECQLPAMV 620
T ++S L + ++P F +++DEAAQ E E+ +PL L+ VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 830
Query: 621 ESKVSDEACFGRSLFEXXXXXXXXXXXXXI----QYRMHPSISFFPNSYFYENKIHDSPT 676
S+ + E SL + I YR H +I + + FYE K+ S
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG- 889
Query: 677 VEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKGWINS 735
K+ K F Y P +F G +E + N EV V++ + L + W +
Sbjct: 890 --KQPAHKDF-----Y-PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 941
Query: 736 KEKL---SIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVR 792
KL SIG+V+PY QV I+ +L K ++ +V++V QG + ++ +STVR
Sbjct: 942 WGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVE-RVLNV---QGKQFRVLFLSTVR 997
Query: 793 SNN 795
+ +
Sbjct: 998 TRH 1000
Score = 74 (31.1 bits), Expect = 5.0e-07, Sum P(5) = 5.0e-07
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 200 SNRRIWNS-LHMKGNLKIIKELLCTDSGATVQL----IWGPPGTGKTKTVSMLLV-ILLQ 253
S R W+ L + N K + +L + +QL I GP GTGKT T++ + IL Q
Sbjct: 629 SPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ 688
Query: 254 MKFRTLVCT 262
+ R L+CT
Sbjct: 689 QETRILICT 697
Score = 62 (26.9 bits), Expect = 5.0e-07, Sum P(5) = 5.0e-07
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLT---RNRSVWKALV 839
GF+SN + +N A+TRA+ + ++G+ L R R W+ +
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1068
Score = 43 (20.2 bits), Expect = 5.0e-07, Sum P(5) = 5.0e-07
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 1652 LVQVRRLDDSLAQAMQVASSPEEW 1675
L Q + L D Q+ SSPE W
Sbjct: 1781 LAQCKELQDHSNQSSFNFSSPESW 1804
Score = 37 (18.1 bits), Expect = 5.0e-07, Sum P(5) = 5.0e-07
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1603 SFNEVKHNILCSELKQLYV 1621
+F ++K + ELK+ YV
Sbjct: 1081 TFEQIKAQLEALELKKTYV 1099
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 156 (60.0 bits), Expect = 5.1e-07, Sum P(5) = 5.1e-07
Identities = 71/243 (29%), Positives = 113/243 (46%)
Query: 564 TASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQLSGIK-HAVLFGDECQLPAMV 620
T ++S L + ++P F +++DEAAQ E E+ +PL L+ VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 621 ESKVSDEACFGRSLFEXXXXXXXXXXXXXI----QYRMHPSISFFPNSYFYENKIHDSPT 676
S+ + E SL + I YR H +I + + FYE K+ S
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG- 889
Query: 677 VEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKGWINS 735
K+ K F Y P +F G +E + N EV V++ + L + W +
Sbjct: 890 --KQPAHKDF-----Y-PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 941
Query: 736 KEKL---SIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVR 792
KL SIG+V+PY QV I+ +L K ++ +V++V QG + ++ +STVR
Sbjct: 942 WGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVE-RVLNV---QGKQFRVLFLSTVR 997
Query: 793 SNN 795
+ +
Sbjct: 998 TRH 1000
Score = 75 (31.5 bits), Expect = 5.1e-07, Sum P(5) = 5.1e-07
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 200 SNRRIWNS-LHMKGNLKIIKELLCTDSGATVQL----IWGPPGTGKTKTVSMLLV-ILLQ 253
S R W+ L + N K + +L + ++QL I GP GTGKT T++ + IL Q
Sbjct: 629 SPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ 688
Query: 254 MKFRTLVCT 262
+ R L+CT
Sbjct: 689 QETRILICT 697
Score = 62 (26.9 bits), Expect = 5.1e-07, Sum P(5) = 5.1e-07
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLT---RNRSVWKALV 839
GF+SN + +N A+TRA+ + ++G+ L R R W+ +
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1068
Score = 42 (19.8 bits), Expect = 5.1e-07, Sum P(5) = 5.1e-07
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 1652 LVQVRRLDDSLAQAMQVASSPEEW 1675
L Q + L D Q+ SSPE W
Sbjct: 1783 LAQCKELQDHNNQSSFNFSSPESW 1806
Score = 37 (18.1 bits), Expect = 5.1e-07, Sum P(5) = 5.1e-07
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1603 SFNEVKHNILCSELKQLYV 1621
+F ++K + ELK+ YV
Sbjct: 1081 TFEQIKAQLEALELKKTYV 1099
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 118 (46.6 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 772 VMSVDGFQGGEEDIIIISTVRSNNGGSIG-FISNPRRVNVALTRARHCLWILGNERTLTR 830
++++D FQG ++D IIIS VRSN IG I + +R+NVA TRA+ L +G++ +L++
Sbjct: 1753 ILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSK 1812
Score = 98 (39.6 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
Identities = 42/152 (27%), Positives = 70/152 (46%)
Query: 527 KLLSSFNELNLPS----AVEKDLLEDLLK-RFCLKRASLFFSTASSSYMLHSVAMK-PLN 580
++ SS N+++ PS +EK ++ + + L+R L ++ + H +K +
Sbjct: 1396 RVASSLNQID-PSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLG--INHQCLLKMQFD 1452
Query: 581 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXX 640
+ +IDEA+ L + S P+ L K VL GD QLP +V +K + + SLF+
Sbjct: 1453 YCIIDEASILSQPISMGPI-LK-CKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLST 1510
Query: 641 XXXXXXXXXI-QYRMHPSISFFPNSYFYENKI 671
QYRM SI N Y N++
Sbjct: 1511 SHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRL 1542
Score = 71 (30.1 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 195 LINRTSNRRIWNSLHMKGNLKIIK-----ELLCTDSGATVQLIWGPPGTGKTKTVSMLLV 249
+ ++ W S+ + + ++ ++ T S LI G PGTGKT V L+
Sbjct: 1300 IFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIH 1359
Query: 250 ILLQMKFRTLVCTPTIVAIKEL 271
IL ++ + L+ + T ++ L
Sbjct: 1360 ILWRLGKKVLITSFTHTSLDHL 1381
Score = 37 (18.1 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 71 TRANLMSGMEKISNAPFAQVVAFEDSKPYGSMLYDVKVDCWRN-RF 115
TR +++ ++ N+ + V F GS+++++ +C +N RF
Sbjct: 698 TRRSVLKEQIRVGNSNSSTVPIF------GSIVHEIFQECLKNNRF 737
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 157 (60.3 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 79/319 (24%), Positives = 143/319 (44%)
Query: 521 CHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYML-HSVAMKPL 579
C L+K+ + E + L D K +K A + T + + + H +
Sbjct: 1006 CFRHLKKIFTQLEEFRAFELLRSGL--DRSKYLLVKEAKIIAMTCTHAALKRHDLVELGF 1063
Query: 580 NF--LVIDEAAQLKESESTIPLQL-------SGIKHAVLFGDECQLPAMVESKVSDE-AC 629
+ ++++E+AQ+ E E+ IPL L S +K ++ GD QLP ++++ + +
Sbjct: 1064 KYDNILMEESAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1123
Query: 630 FGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPG 689
+SLF Q R S+ N + Y+N + + P V+ + G
Sbjct: 1124 MEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLMPEFRTANAG 1181
Query: 690 PMYGPYSFINV--FGG--REEFIEHSCRNMVEVSVVMKILLNL-YKGWINSKEKLSIGIV 744
+Y + INV F G E + +N+ E V+ + + + G+ + I I+
Sbjct: 1182 FLYD-FQLINVEDFNGVGESEPNPYFYQNLGEAEYVVAVFMYMCLLGYPADR----ISIL 1236
Query: 745 SPYIAQVAAIQEKLGSKYVNSA--GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFI 802
+ Y Q I++ + + N+ G KV +VD FQG + D I++S VR+ G +
Sbjct: 1237 TTYNGQKHLIRDVINQRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTKAVGHLR-- 1294
Query: 803 SNPRRVNVALTRARHCLWI 821
+ RR+ VA++RAR L+I
Sbjct: 1295 RDVRRLVVAMSRARLGLYI 1313
Score = 71 (30.1 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKF---RTLVCTPTIVAIKELASRVVKL 278
++ GPPGTGKT V++ ++ L F RTL+ T + A+ +L +++ L
Sbjct: 829 MVVGPPGTGKTD-VAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMAL 878
Score = 41 (19.5 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 33 LEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVF 65
+ED++ +++ K K QY E++++
Sbjct: 54 IEDVYAKEIVKSKFAIRKIMLLEFSQYLENYLW 86
>UNIPROTKB|F1PA16 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0000398 OMA:RTKAVGH GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467
EMBL:AAEX03016041 Ensembl:ENSCAFT00000013319 Uniprot:F1PA16
Length = 1483
Score = 163 (62.4 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 82/320 (25%), Positives = 146/320 (45%)
Query: 521 CHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLN 580
C ++K+ + E + L D K +K A + T + + + +K L
Sbjct: 996 CFRHIKKIFTQLEEFRASELLRSGL--DRSKYLLVKEAKIIAMTCTHAALKRHDLVK-LG 1052
Query: 581 F----LVIDEAAQLKESESTIPLQL-------SGIKHAVLFGDECQLPAMVESKVSDE-A 628
F ++++EAAQ+ E E+ IPL L S +K ++ GD QLP ++++ + +
Sbjct: 1053 FKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYS 1112
Query: 629 CFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLP 688
+SLF Q R S+ N + Y+N + + P V+
Sbjct: 1113 NMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLPEFSTANA 1170
Query: 689 GPMYGPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILLNL-YKGWINSKEKLSIGI 743
G +Y + INV F G G E + +N+ E V+ + + + G+ K I I
Sbjct: 1171 GLLYD-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADK----ISI 1225
Query: 744 VSPYIAQVAAIQEKLGSKYVNSA--GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGF 801
++ Y Q I++ + + ++ G KV +VD FQG + D I++S VR+ ++G
Sbjct: 1226 LTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AVGH 1282
Query: 802 ISNPRRVNVALTRARHCLWI 821
+ + RR+ VA++RAR L+I
Sbjct: 1283 LRDVRRLVVAMSRARLGLYI 1302
Score = 78 (32.5 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPTIVAIKELASRVVKL 278
++ GPPGTGKT ++ + + RTL+ TP+ A+ +L +++ L
Sbjct: 820 MVVGPPGTGKTDVAVQIISNIYHFPEQRTLIVTPSNPALNQLFEKIMAL 868
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 1461 VLNLAQSIIELLYRFFPHSVDILKPETSLIYGEPPILLESGDE 1503
+ N+ Q + +Y + H + + PP ++E G+E
Sbjct: 1354 IKNMPQ-MANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEE 1395
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 33 LEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVF 65
+EDI+ +++ K + QY E++++
Sbjct: 46 IEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLW 78
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 508 VDIKYLLHKRRSECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKR 552
+D ++LL E K S + +N A +LLE++ KR
Sbjct: 870 IDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEV-KR 913
>WB|WBGene00019529 [details] [associations]
symbol:K08D10.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] eggNOG:COG1112
EMBL:FO081596 GeneTree:ENSGT00530000065249 PIR:T29386
RefSeq:NP_500503.1 UniGene:Cel.27256 ProteinModelPortal:Q21321
SMR:Q21321 PaxDb:Q21321 EnsemblMetazoa:K08D10.5 GeneID:187150
KEGG:cel:CELE_K08D10.5 UCSC:K08D10.5 CTD:187150 WormBase:K08D10.5
InParanoid:Q21321 OMA:KEINIFR NextBio:934280 Uniprot:Q21321
Length = 602
Score = 153 (58.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 70/288 (24%), Positives = 115/288 (39%)
Query: 584 IDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDE---ACFGRSLFEXXXX 640
IDEA+QL L +L GD QLP E + E A G L
Sbjct: 320 IDEASQLALYVLGSLATLLPKTRIILVGDMHQLPPYTEDALPAELKRAAVGEPLTLAVKG 379
Query: 641 XXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPMYGPYSFINV 700
+R I+ + FY N + + R + P + P+ F+N
Sbjct: 380 RRWSSMHLTRVHRCPKMITDLLGAVFYGNTLTSTRKAVNRVPILEAMELPSHHPFVFVNY 439
Query: 701 FGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLGS 760
+ + + S N E ++++ L + +S+ +++ Y AQ +
Sbjct: 440 ISQQTQ-VGKSFSNENEARYALQLVTALKRHAREQNTTVSVAVLNFYGAQYS-------- 490
Query: 761 KYVNS-AGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHCL 819
YV S A V+V ++DG QG E D+ I+ RS+ F+ NP R+NVAL+R++
Sbjct: 491 -YVYSIAEDGVRVNTIDGCQGQEYDVSIVLLTRSDPYEKSKFLVNPNRINVALSRSKMAT 549
Query: 820 WILGNERTLTRNRSV-------------WKALVDDAKARQCFFNADDD 854
++G + + +V W L+D A +CF A D+
Sbjct: 550 VVIGQRHLIGNHPNVQQAKRGRYQRSCNWSRLLDKLPA-ECFVEARDE 596
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 156 (60.0 bits), Expect = 1.5e-06, Sum P(5) = 1.5e-06
Identities = 71/243 (29%), Positives = 113/243 (46%)
Query: 564 TASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQLSGIK-HAVLFGDECQLPAMV 620
T ++S L + ++P F +++DEAAQ E E+ +PL L+ VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 831
Query: 621 ESKVSDEACFGRSLFEXXXXXXXXXXXXXI----QYRMHPSISFFPNSYFYENKIHDSPT 676
S+ + E SL + I YR H +I + + FYE K+ S
Sbjct: 832 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG- 890
Query: 677 VEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKGWINS 735
K+ K F Y P +F G +E + N EV V++ + L + W +
Sbjct: 891 --KQPAHKDF-----Y-PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 942
Query: 736 KEKL---SIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVR 792
KL SIG+V+PY QV I+ +L K ++ +V++V QG + ++ +STVR
Sbjct: 943 WGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVE-RVLNV---QGKQFRVLFLSTVR 998
Query: 793 SNN 795
+ +
Sbjct: 999 TRH 1001
Score = 69 (29.3 bits), Expect = 1.5e-06, Sum P(5) = 1.5e-06
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 200 SNRRIWNS-LHMKGNLKIIKELLCTDSGATVQL----IWGPPGTGKTKTVSMLLVILLQM 254
S R W+ L + N K + +L + +QL I GP GTGKT T++ + +LQ
Sbjct: 629 SPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ 688
Query: 255 K--FRTLVCT 262
+ R L+CT
Sbjct: 689 QETSRILICT 698
Score = 62 (26.9 bits), Expect = 1.5e-06, Sum P(5) = 1.5e-06
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLT---RNRSVWKALV 839
GF+SN + +N A+TRA+ + ++G+ L R R W+ +
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1069
Score = 43 (20.2 bits), Expect = 1.5e-06, Sum P(5) = 1.5e-06
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 1652 LVQVRRLDDSLAQAMQVASSPEEW 1675
L Q + L D Q+ SSPE W
Sbjct: 1782 LAQCKELQDHSNQSSFNFSSPESW 1805
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(5) = 1.5e-06
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1603 SFNEVKHNILCSELKQLYV 1621
+F ++K + ELK+ YV
Sbjct: 1082 TFEQIKAQLEALELKKTYV 1100
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 155 (59.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 741 IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIG 800
IGI++PY Q+ I + L S G V+V +VD +QG ++ I+++S VRSN G++G
Sbjct: 699 IGIIAPYRQQLKIINDLLA----RSIGM-VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVG 753
Query: 801 -FISNPRRVNVALTRARHCLWILG 823
+ + RR+NVA+TRA+H L +LG
Sbjct: 754 ELLKDWRRLNVAITRAKHKLILLG 777
Score = 53 (23.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 231 LIWGPPGTGKTKTVSMLL 248
LI G PGTGKT T+ L+
Sbjct: 645 LIVGMPGTGKTTTICTLV 662
Score = 39 (18.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 529 LSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSS 568
L LNL K +ED L FC K A F +S+
Sbjct: 193 LKEMYRLNLSQDEIKQEVEDYLPSFC-KWAGDFMHKNTST 231
>RGD|1306223 [details] [associations]
symbol:Aqr "aquarius homolog (mouse)" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901 RGD:1306223
GO:GO:0005681 GO:GO:0000398 GO:GO:0097157 PANTHER:PTHR10887:SF5
IPI:IPI00389267 ProteinModelPortal:D3ZZP0
Ensembl:ENSRNOT00000011917 UCSC:RGD:1306223 ArrayExpress:D3ZZP0
Uniprot:D3ZZP0
Length = 1353
Score = 168 (64.2 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 83/320 (25%), Positives = 146/320 (45%)
Query: 521 CHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLN 580
C ++K+ + E + L D K +K A + T + + + +K L
Sbjct: 997 CFRHIKKIFTQLEEFRASELLRSGL--DRSKYLLVKEAKIIAMTCTHAALKRHDLVK-LG 1053
Query: 581 F----LVIDEAAQLKESESTIPLQL-------SGIKHAVLFGDECQLPAMVESKVSDE-A 628
F ++++EAAQ+ E E+ IPL L S +K ++ GD QLP ++++ + +
Sbjct: 1054 FKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYS 1113
Query: 629 CFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLP 688
+SLF Q R S+ N + Y+N + + P V+
Sbjct: 1114 NMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLPEFSTANA 1171
Query: 689 GPMYGPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILLNL-YKGWINSKEKLSIGI 743
G +Y + INV F G G E + +N+ E V+ + + + G+ K I I
Sbjct: 1172 GLLYD-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADK----ISI 1226
Query: 744 VSPYIAQVAAIQEKLGSKYVNSA--GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGF 801
++ Y Q I++ + + N+ G KV +VD FQG + D I++S VR+ ++G
Sbjct: 1227 LTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AVGH 1283
Query: 802 ISNPRRVNVALTRARHCLWI 821
+ + RR+ VA++RAR L+I
Sbjct: 1284 LRDVRRLVVAMSRARLGLYI 1303
Score = 69 (29.3 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKF---RTLVCTPTIVAIKELASRVVKL 278
++ GPPGTGKT V++ ++ + F RTL+ T + A+ +L +++ L
Sbjct: 820 MVVGPPGTGKTD-VAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMAL 869
Score = 38 (18.4 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 508 VDIKYLLHKRRSECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKR 552
+D ++LL E K S + +N A +LLE++ KR
Sbjct: 871 IDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEV-KR 914
Score = 37 (18.1 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 6/33 (18%), Positives = 17/33 (51%)
Query: 33 LEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVF 65
+E+I+ +++ K + QY E++++
Sbjct: 46 IEEIYEKEIVKSRFAIRKIMLLEFSQYLENYLW 78
>UNIPROTKB|O60306 [details] [associations]
symbol:AQR "Intron-binding protein aquarius" species:9606
"Homo sapiens" [GO:0097157 "pre-mRNA intronic binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0000398 EMBL:AB011132 EMBL:EF553519
EMBL:BC036913 EMBL:BC070379 EMBL:BC108262 EMBL:BC127111
EMBL:BC127112 IPI:IPI00796835 PIR:T00333 RefSeq:NP_055506.1
UniGene:Hs.510958 ProteinModelPortal:O60306 SMR:O60306
IntAct:O60306 STRING:O60306 PhosphoSite:O60306 PaxDb:O60306
PRIDE:O60306 Ensembl:ENST00000156471 GeneID:9716 KEGG:hsa:9716
UCSC:uc001ziv.3 CTD:9716 GeneCards:GC15M035147 HGNC:HGNC:29513
MIM:610548 neXtProt:NX_O60306 PharmGKB:PA134869224 eggNOG:COG1112
HOGENOM:HOG000170551 HOVERGEN:HBG080430 InParanoid:O60306 KO:K12874
OMA:RTKAVGH OrthoDB:EOG4ZPDTF ChiTaRS:AQR GenomeRNAi:9716
NextBio:36525 Bgee:O60306 CleanEx:HS_AQR Genevestigator:O60306
GermOnline:ENSG00000021776 GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 Uniprot:O60306
Length = 1485
Score = 168 (64.2 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 83/320 (25%), Positives = 146/320 (45%)
Query: 521 CHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLN 580
C ++K+ + E + L D K +K A + T + + + +K L
Sbjct: 997 CFRHIKKIFTQLEEFRASELLRSGL--DRSKYLLVKEAKIIAMTCTHAALKRHDLVK-LG 1053
Query: 581 F----LVIDEAAQLKESESTIPLQL-------SGIKHAVLFGDECQLPAMVESKVSDE-A 628
F ++++EAAQ+ E E+ IPL L S +K ++ GD QLP ++++ + +
Sbjct: 1054 FKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYS 1113
Query: 629 CFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLP 688
+SLF Q R S+ N + Y+N + + P V+
Sbjct: 1114 NMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLPEFSTANA 1171
Query: 689 GPMYGPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILLNL-YKGWINSKEKLSIGI 743
G +Y + INV F G G E + +N+ E V+ + + + G+ K I I
Sbjct: 1172 GLLYD-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADK----ISI 1226
Query: 744 VSPYIAQVAAIQEKLGSKYVNSA--GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGF 801
++ Y Q I++ + + N+ G KV +VD FQG + D I++S VR+ ++G
Sbjct: 1227 LTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AVGH 1283
Query: 802 ISNPRRVNVALTRARHCLWI 821
+ + RR+ VA++RAR L+I
Sbjct: 1284 LRDVRRLVVAMSRARLGLYI 1303
Score = 69 (29.3 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKF---RTLVCTPTIVAIKELASRVVKL 278
++ GPPGTGKT V++ ++ + F RTL+ T + A+ +L +++ L
Sbjct: 820 MVVGPPGTGKTD-VAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMAL 869
Score = 42 (19.8 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 1461 VLNLAQSIIELLYRFFPHSVDILKPETSLIYGEPPILLESGDE 1503
+ N+ Q + +Y + H + + PP ++E G+E
Sbjct: 1355 IKNMPQ-MANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEE 1396
Score = 41 (19.5 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 33 LEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVF 65
+EDI+ +++ K + QY E++++
Sbjct: 46 IEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLW 78
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 508 VDIKYLLHKRRSECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKR 552
+D ++LL E K S + +N A +LLE++ KR
Sbjct: 871 IDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEV-KR 914
Score = 37 (18.1 bits), Expect = 6.0e-06, Sum P(5) = 6.0e-06
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 40 DLFKDKVKRIPFSFRSV 56
++FK K PF F+ +
Sbjct: 110 EIFKKKPDHFPFFFKHI 126
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 158 (60.7 bits), Expect = 2.8e-06, Sum P(5) = 2.8e-06
Identities = 71/243 (29%), Positives = 113/243 (46%)
Query: 564 TASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQLSGIK-HAVLFGDECQLPAMV 620
T ++S L + ++P F +++DEAAQ E E+ +PL L+ VL GD QL V
Sbjct: 760 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFV 819
Query: 621 ESKVSDEACFGRSLFEXXXXXXXXXXXXXI----QYRMHPSISFFPNSYFYENKIHDSPT 676
S+ + E SL + I YR H +I + + FYE K+ S
Sbjct: 820 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG- 878
Query: 677 VEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKGWINS 735
K+ K F Y P +F G +E + N EV V++ + L + W +
Sbjct: 879 --KQPAHKDF-----Y-PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 930
Query: 736 KEKL---SIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVR 792
KL SIG+V+PY QV I+ +L K ++ +V++V QG + ++ +STVR
Sbjct: 931 WGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVSVE-RVLNV---QGKQFRVLFLSTVR 986
Query: 793 SNN 795
+ +
Sbjct: 987 TRH 989
Score = 70 (29.7 bits), Expect = 2.8e-06, Sum P(5) = 2.8e-06
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 200 SNRRIWNS-LHMKGNLKIIKELLCTDSGATVQL----IWGPPGTGKTKTVSMLLVILLQM 254
S R W+ L + N K + +L + ++QL I GP GTGKT T++ + +LQ
Sbjct: 617 SPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ 676
Query: 255 K--FRTLVCT 262
+ R L+CT
Sbjct: 677 QDTSRILICT 686
Score = 62 (26.9 bits), Expect = 2.8e-06, Sum P(5) = 2.8e-06
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLT---RNRSVWKALV 839
GF+SN + +N A+TRA+ + ++G+ L R R W+ +
Sbjct: 1015 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1057
Score = 37 (18.1 bits), Expect = 2.8e-06, Sum P(5) = 2.8e-06
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1603 SFNEVKHNILCSELKQLYV 1621
+F ++K + ELK+ YV
Sbjct: 1070 TFEQIKAQLEALELKKTYV 1088
Score = 37 (18.1 bits), Expect = 2.8e-06, Sum P(5) = 2.8e-06
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 1652 LVQVRRLDDSLAQAMQVASSPEEW 1675
L Q + L D Q+ SSPE W
Sbjct: 1771 LGQCKELQDHSNQSSFNYSSPELW 1794
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 156 (60.0 bits), Expect = 5.9e-06, Sum P(5) = 5.9e-06
Identities = 71/243 (29%), Positives = 113/243 (46%)
Query: 564 TASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQLSGIK-HAVLFGDECQLPAMV 620
T ++S L + ++P F +++DEAAQ E E+ +PL L+ VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 831
Query: 621 ESKVSDEACFGRSLFEXXXXXXXXXXXXXI----QYRMHPSISFFPNSYFYENKIHDSPT 676
S+ + E SL + I YR H +I + + FYE K+ S
Sbjct: 832 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG- 890
Query: 677 VEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKGWINS 735
K+ K F Y P +F G +E + N EV V++ + L + W +
Sbjct: 891 --KQPAHKDF-----Y-PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVA 942
Query: 736 KEKL---SIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVR 792
KL SIG+V+PY QV I+ +L K ++ +V++V QG + ++ +STVR
Sbjct: 943 WGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVE-RVLNV---QGKQFRVLFLSTVR 998
Query: 793 SNN 795
+ +
Sbjct: 999 TRH 1001
Score = 68 (29.0 bits), Expect = 5.9e-06, Sum P(5) = 5.9e-06
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 200 SNRRIWNS-LHMKGNLKIIKELLCTDSGATVQL----IWGPPGTGKTKTVSMLLVILLQM 254
S R W+ L + N K + +L + +QL I GP GTGKT T++ + +LQ
Sbjct: 629 SPNRQWDEQLDPRLNAKQKEAVLAITTPLCIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ 688
Query: 255 K--FRTLVCT 262
+ R L+CT
Sbjct: 689 QETSRILICT 698
Score = 62 (26.9 bits), Expect = 5.9e-06, Sum P(5) = 5.9e-06
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLT---RNRSVWKALV 839
GF+SN + +N A+TRA+ + ++G+ L R R W+ +
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPVALCSIGRCRKFWERFI 1069
Score = 38 (18.4 bits), Expect = 5.9e-06, Sum P(5) = 5.9e-06
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 414 CGKEADASDVEIKPFLEFVRERFKCIAAPLR 444
C A+D+ IK +L E A PLR
Sbjct: 697 CTHSNSAADLYIKDYLHPYVEAGNAQARPLR 727
Score = 37 (18.1 bits), Expect = 5.9e-06, Sum P(5) = 5.9e-06
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1603 SFNEVKHNILCSELKQLYV 1621
+F ++K + ELK+ YV
Sbjct: 1082 TFEQIKAQLEALELKKTYV 1100
>ZFIN|ZDB-GENE-050508-3 [details] [associations]
symbol:zgc:113057 "zgc:113057" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026855 ZFIN:ZDB-GENE-050508-3
GO:GO:0004386 eggNOG:COG1112 PANTHER:PTHR10887:SF16 IPI:IPI00492493
EMBL:BC094297 RefSeq:NP_001018332.1 UniGene:Dr.115608
ProteinModelPortal:Q52KK8 GeneID:552926 KEGG:dre:552926
HOGENOM:HOG000007768 InParanoid:Q52KK8 NextBio:20879878
Uniprot:Q52KK8
Length = 231
Score = 137 (53.3 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 46/130 (35%), Positives = 65/130 (50%)
Query: 741 IGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNN----- 795
I I++PY AQV+ I+ L K V + V V +V QG E +I+STVRS +
Sbjct: 75 IAILTPYNAQVSEIKMTLEKKNVRN----VTVCTVMKSQGSEWPYVIVSTVRSCSTSDIQ 130
Query: 796 -----------GGSIGFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKALVDDAKA 844
G +GF+++ +VNVA+TRA+ L ILGN L R +W L+D
Sbjct: 131 AYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNS-DLLRCCELWDRLLDHYYR 189
Query: 845 RQCFFNADDD 854
+ C N D
Sbjct: 190 KSCVVNPASD 199
>MGI|MGI:1276102 [details] [associations]
symbol:Aqr "aquarius" species:10090 "Mus musculus"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 MGI:MGI:1276102 GO:GO:0000398
CTD:9716 eggNOG:COG1112 HOGENOM:HOG000170551 HOVERGEN:HBG080430
KO:K12874 OMA:RTKAVGH OrthoDB:EOG4ZPDTF GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 EMBL:AK122310 EMBL:AK145547 EMBL:AK151716
EMBL:BC042479 EMBL:U90333 IPI:IPI00330263 RefSeq:NP_033832.2
UniGene:Mm.2545 ProteinModelPortal:Q8CFQ3 SMR:Q8CFQ3
PhosphoSite:Q8CFQ3 PaxDb:Q8CFQ3 PRIDE:Q8CFQ3
Ensembl:ENSMUST00000043160 GeneID:11834 KEGG:mmu:11834
GeneTree:ENSGT00700000104467 InParanoid:Q8CFQ3 NextBio:279759
Bgee:Q8CFQ3 CleanEx:MM_AQR Genevestigator:Q8CFQ3
GermOnline:ENSMUSG00000040383 Uniprot:Q8CFQ3
Length = 1481
Score = 168 (64.2 bits), Expect = 9.1e-06, Sum P(5) = 9.1e-06
Identities = 83/320 (25%), Positives = 146/320 (45%)
Query: 521 CHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLN 580
C ++K+ + E + L D K +K A + T + + + +K L
Sbjct: 1001 CFRHIKKIFTQLEEFRASELLRSGL--DRSKYLLVKEAKIIAMTCTHAALKRHDLVK-LG 1057
Query: 581 F----LVIDEAAQLKESESTIPLQL-------SGIKHAVLFGDECQLPAMVESKVSDE-A 628
F ++++EAAQ+ E E+ IPL L S +K ++ GD QLP ++++ + +
Sbjct: 1058 FKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYS 1117
Query: 629 CFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLP 688
+SLF Q R S+ N + Y+N + + P V+
Sbjct: 1118 NMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLPEFSTANA 1175
Query: 689 GPMYGPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILLNL-YKGWINSKEKLSIGI 743
G +Y + INV F G G E + +N+ E V+ + + + G+ K I I
Sbjct: 1176 GLLYD-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADK----ISI 1230
Query: 744 VSPYIAQVAAIQEKLGSKYVNSA--GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGF 801
++ Y Q I++ + + N+ G KV +VD FQG + D I++S VR+ ++G
Sbjct: 1231 LTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AVGH 1287
Query: 802 ISNPRRVNVALTRARHCLWI 821
+ + RR+ VA++RAR L+I
Sbjct: 1288 LRDVRRLVVAMSRARLGLYI 1307
Score = 69 (29.3 bits), Expect = 9.1e-06, Sum P(5) = 9.1e-06
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKF---RTLVCTPTIVAIKELASRVVKL 278
++ GPPGTGKT V++ ++ + F RTL+ T + A+ +L +++ L
Sbjct: 820 MVVGPPGTGKTD-VAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMAL 869
Score = 40 (19.1 bits), Expect = 9.1e-06, Sum P(5) = 9.1e-06
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 1461 VLNLAQSIIELLYRFFPHSVDILKPETSLIYGEPPILLESGDE 1503
+ N+ Q + +Y + H + PP ++E G+E
Sbjct: 1359 IKNMPQ-MANFVYNMYMHLIQTTHHYHQTFLQLPPAMVEEGEE 1400
Score = 38 (18.4 bits), Expect = 9.1e-06, Sum P(5) = 9.1e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 508 VDIKYLLHKRRSECHFVLRKLLSSFNELNLPSAVEKDLLEDLLKR 552
+D ++LL E K S + +N A +LLE++ KR
Sbjct: 871 IDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEV-KR 914
Score = 37 (18.1 bits), Expect = 9.1e-06, Sum P(5) = 9.1e-06
Identities = 6/33 (18%), Positives = 17/33 (51%)
Query: 33 LEDIFNEDLFKDKVKRIPFSFRSVGQYFESFVF 65
+E+I+ +++ K + QY E++++
Sbjct: 46 IEEIYEKEIVKSRFAIRKIMLLEFSQYLENYLW 78
>UNIPROTKB|Q886X0 [details] [associations]
symbol:PSPTO_1455 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG1112
InterPro:IPR024402 Pfam:PF10881 RefSeq:NP_791281.1
ProteinModelPortal:Q886X0 GeneID:1183092 KEGG:pst:PSPTO_1455
PATRIC:19994154 HOGENOM:HOG000273296 OMA:HYRCHPK
ProtClustDB:CLSK879830 BioCyc:PSYR223283:GJIX-1482-MONOMER
Uniprot:Q886X0
Length = 758
Score = 94 (38.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 39/129 (30%), Positives = 62/129 (48%)
Query: 555 LKRASLFFSTASSSYMLHSVAMKP-LNFLVIDEAAQLKESESTIP--LQLSGIKHAVLFG 611
LKR + S+ S +++S+ K L++++IDEA+Q + +P L LS K+ ++ G
Sbjct: 310 LKRYPVIGSSTHS--IVNSLGGKAVLDYVIIDEASQ----QDIVPGVLALSCAKNLIIVG 363
Query: 612 DECQLPAMVESKVSDEA------CFGRSLFEXXXXXXXXXXXXXI---QYRMHPSISFFP 662
D QL A + K+ EA C SL + + YR HP I F
Sbjct: 364 DRKQL-AHIPEKLGLEAPAPWYDCETYSLLDSCVGVFGDSIPMTLLKEHYRCHPRIIQFC 422
Query: 663 NSYFYENKI 671
N FY+N++
Sbjct: 423 NQQFYDNQL 431
Score = 78 (32.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 229 VQLIWGPPGTGKTKTVSMLLV-ILLQMKFRTLVCTPTIVAIKELASRVVK 277
+ LI GPPGTGKT+T+ ++ ILLQ K +V A+K + ++ K
Sbjct: 46 ISLIEGPPGTGKTQTILNIIANILLQGKTVAVVSNNN-AAVKNVYEKLGK 94
Score = 78 (32.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 742 GIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTV--RSNNGGSI 799
G ++P+ Q L + ++N +V FQG E D I+ STV + + +
Sbjct: 485 GFIAPFKNQATLSGSCLPADFIND--------TVHKFQGRECDEIVFSTVLDKHKSPERL 536
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLTRNRSVWKA 837
F+ + R VNVA++RA+ N TL V+KA
Sbjct: 537 SFVDDARMVNVAVSRAK-------NRFTLVTGDGVFKA 567
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 162 (62.1 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 72/244 (29%), Positives = 115/244 (47%)
Query: 564 TASSSYMLHSVAMKPLNF--LVIDEAAQLKESESTIPLQLSGIKHA--VLFGDECQLPAM 619
T ++S L + ++P F +++DEAAQ E E+ +PL L+ +H VL GD QL
Sbjct: 776 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALA-TRHTRVVLAGDHMQLSPF 834
Query: 620 VESKVSDEACFGRSLFEXXXXXXXXXXXXXI----QYRMHPSISFFPNSYFYENKIHDSP 675
V S+ + E SL + I YR H +I + + FYE K+ S
Sbjct: 835 VYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASG 894
Query: 676 TVEKRSYEKRFLPGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKGWIN 734
K+ K F Y P +F G +E + N EV V++ + L + W
Sbjct: 895 ---KQPAHKEF-----Y-PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPV 945
Query: 735 SKEKL---SIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTV 791
+ KL SIG+V+PY QV I+ +L K ++ +V++V QG + ++ +STV
Sbjct: 946 AWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVE-RVLNV---QGKQFRVLFLSTV 1001
Query: 792 RSNN 795
R+ +
Sbjct: 1002 RTRH 1005
Score = 62 (26.9 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 800 GFISNPRRVNVALTRARHCLWILGNERTLT---RNRSVWKALV 839
GF+SN + +N A+TRA+ + ++G+ L R R W+ +
Sbjct: 1031 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFI 1073
Score = 43 (20.2 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 1652 LVQVRRLDDSLAQAMQVASSPEEW 1675
L Q + L D Q+ SSPE W
Sbjct: 1780 LAQRKELQDHNNQSSFTFSSPESW 1803
Score = 37 (18.1 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1603 SFNEVKHNILCSELKQLYV 1621
+F ++K + ELK+ YV
Sbjct: 1086 TFEQIKAQLEALELKKTYV 1104
>UNIPROTKB|F1SRZ7 [details] [associations]
symbol:F1SRZ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
GO:GO:0005681 GO:GO:0000398 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:CU633172
Ensembl:ENSSSCT00000005301 Uniprot:F1SRZ7
Length = 1206
Score = 136 (52.9 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 73/301 (24%), Positives = 132/301 (43%)
Query: 521 CHFVLRKLLSSFNELNLPSAVEKDLLEDLLKRFCLKRASLFFSTASSSYMLHSVAMKPLN 580
C ++K+ + E + L D K +K A + T + + + +K L
Sbjct: 914 CFRHIKKIFTQLEEFRASELLRSGL--DRSKYLLVKEAKIIAMTCTHAALKRHDLVK-LG 970
Query: 581 F----LVIDEAAQLKESESTIPLQL-------SGIKHAVLFGDECQLPAMVESKVSDE-A 628
F ++++EAAQ+ E E+ IPL L S +K ++ GD QLP ++++ + +
Sbjct: 971 FKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYS 1030
Query: 629 CFGRSLFEXXXXXXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDSPTVEKRSYEKRFLP 688
+SLF Q R S+ N + Y+N + + P V+
Sbjct: 1031 NMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYKN-LGNLPHVQLLPEFSTANA 1088
Query: 689 GPMYGPYSFINV--F-G-GREEFIEHSCRNMVEVSVVMKILLNL-YKGWINSKEKLSIGI 743
G +Y + INV F G G E + +N+ E V+ + + + G+ K I I
Sbjct: 1089 GLLYD-FQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADK----ISI 1143
Query: 744 VSPYIAQVAAIQEKLGSKYVNSA--GFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGF 801
++ Y Q I++ + + ++ G KV +VD FQG + D I++S VR+ G + +
Sbjct: 1144 LTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRY 1203
Query: 802 I 802
+
Sbjct: 1204 V 1204
Score = 60 (26.2 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 234 GPPGTGKTKTVSMLLVILLQMKF---RTLVCTPTIVAIKELASRVVKL 278
GPPGTGKT V++ ++ + F RT + T + A+ +L +++ L
Sbjct: 740 GPPGTGKTD-VAVPIISNIYRNFPEQRTRIVTRSNHALNQLFEKIMAL 786
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 135 (52.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 72/267 (26%), Positives = 117/267 (43%)
Query: 582 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFEXXXXX 641
+++DEA+ + E +P+ + K VL GD QL +V S+ + + G S E
Sbjct: 823 VIVDEASMVLEP-LLLPVLATSNKF-VLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQS 880
Query: 642 X-XXXXXXXIQYRMHPSISFFPNSYFYENK-IHDSPTVEKRSYEKR--FLPGPMYGPYSF 697
QYRM+ IS + FYEN+ I + +V + S ++ ++ G
Sbjct: 881 HPGVVVSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDHI 940
Query: 698 INVFGGREEFIEHSCRNMVEVSVV-------------------MKILLNLYKGWINSKEK 738
G I+ SC + S + K++ L + ++ S K
Sbjct: 941 RKALSGD---IKDSCVFLDTQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGVK 997
Query: 739 L-SIGIVSPYIAQVAAIQEKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSNNGG 797
IG++S Y QV I+ L S ++V ++D +QG E+ +II S +NN
Sbjct: 998 PHEIGVMSAYRRQVDHIRGILNSD-------ELEVNTIDSYQGREKRVIIWSLTWTNNST 1050
Query: 798 SIG-FISNPRRVNVALTRARHCLWILG 823
+ + RRVNVALTRAR L ++G
Sbjct: 1051 KKSELLKDERRVNVALTRARQKLVVVG 1077
Score = 65 (27.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 215 KIIKELLCTDSGATVQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKELASR 274
K + L T+ V+ G PG+GKT +S+L+ L+ + L+ T A+ + ++
Sbjct: 692 KAVVHALATEDFMMVE---GLPGSGKTTLISVLIQCLVATNKKVLLAAFTHSAVDNILTK 748
Query: 275 VVKLV 279
+ K V
Sbjct: 749 LTKEV 753
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 521 CHFVLRKLLSSFNELNLPSAVEKDL-LEDLL 550
CH V R+LL S+ ++ E + LE LL
Sbjct: 806 CHHVPRELLFSYRHFDVVIVDEASMVLEPLL 836
>TIGR_CMR|BA_0305 [details] [associations]
symbol:BA_0305 "ATP-dependent DNA helicase PcrA"
species:198094 "Bacillus anthracis str. Ames" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] InterPro:IPR000212
InterPro:IPR005751 InterPro:IPR014016 InterPro:IPR014017
Pfam:PF00580 Pfam:PF13361 PROSITE:PS51198 PROSITE:PS51217
GO:GO:0005524 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0004003 PANTHER:PTHR11070 HSSP:P56255 GO:GO:0006268
Gene3D:1.10.10.160 InterPro:IPR013986 KO:K03657 OMA:ASPHSIL
HOGENOM:HOG000033016 TIGRFAMs:TIGR01073 RefSeq:NP_842854.1
RefSeq:YP_016916.1 ProteinModelPortal:Q81ZG2 SMR:Q81ZG2
DNASU:1086929 EnsemblBacteria:EBBACT00000012924
EnsemblBacteria:EBBACT00000013919 GeneID:1086929 GeneID:2818538
KEGG:ban:BA_0305 KEGG:bar:GBAA_0305 PATRIC:18778156
ProtClustDB:CLSK872778 BioCyc:BANT261594:GJ7F-342-MONOMER
Uniprot:Q81ZG2
Length = 747
Score = 114 (45.2 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 1330 DIFESYEQMKMRNGEFDLADLVN---DLHHRLKE--ESYKGDEFHFVYIDEVQDLTMSQV 1384
D++ Y++ ++N D DL+ L R+ E E Y+ +F ++++DE QD +Q
Sbjct: 176 DVYTEYQKRLLKNNSLDFDDLIMTTIQLFERVPEVLEFYQR-KFQYIHVDEYQDTNKAQY 234
Query: 1385 ALFKYVCKNIEEGFVFSGDTAQTIARGIDFRFQDIRSLFYKKFVLESRNNGNDGRQEKRQ 1444
L K++ + V GD+ Q+I R +R DI ++ F + N
Sbjct: 235 LLVKHLAARFKNLCVV-GDSDQSIYR---WRGADISNIL--SFEKDYEN----------- 277
Query: 1445 LSDIFNLRQNFRTHVGVLNLAQSIIE 1470
+ + L QN+R+ +LN A ++IE
Sbjct: 278 -AQVILLEQNYRSSQNILNAANAVIE 302
Score = 77 (32.2 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 31/115 (26%), Positives = 59/115 (51%)
Query: 1454 NFRTHVGVLNLAQSIIELL-YRFFPHSVDILKPETSLIYGEPPILLESGDEENAILKIFG 1512
N + ++ V L + +IE YR D+LK E +L E LE+ DE ++ + F
Sbjct: 474 NMQEYLSVTELVEEVIEKTGYR------DMLKNERTL---EAEGRLENLDEFLSVTQTFE 524
Query: 1513 NTGEVGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIVESKGLEFQDVLL 1567
+ E ++V F + ++ D V ++ + G++ +++T+ +KGLEF V +
Sbjct: 525 SQSE-DKSLVAFLTDLALVADIDRVDEDPT--AGEEVILMTMHSAKGLEFPVVFI 576
Score = 50 (22.7 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMK----FRTLVCTPTIVAIKELASRVVKLVKESVE 284
L+ G+GKT+ ++ + LL K + L T T A +E+ R+ LV E
Sbjct: 27 LLMAGAGSGKTRVLTHRIAYLLGEKGVAPWNVLAITFTNKAAREMRERIDTLVGPEAE 84
Score = 42 (19.8 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1599 GSFPSFNEVKHNILCSELKQL-YVAITRTRQRLWI 1632
G FP + E ++L YV ITR + L++
Sbjct: 582 GIFPHTRSLMEEDEMQEERRLAYVGITRAEEELYL 616
>WB|WBGene00010989 [details] [associations]
symbol:R03D7.2 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
GO:GO:0006974 EMBL:Z46828 PIR:T23869 RefSeq:NP_496354.1
ProteinModelPortal:Q09594 SMR:Q09594 EnsemblMetazoa:R03D7.2
GeneID:174682 KEGG:cel:CELE_R03D7.2 UCSC:R03D7.2 CTD:174682
WormBase:R03D7.2 eggNOG:KOG1801 GeneTree:ENSGT00530000065249
InParanoid:Q09594 NextBio:885046 Uniprot:Q09594
Length = 542
Score = 129 (50.5 bits), Expect = 0.00040, P = 0.00040
Identities = 68/254 (26%), Positives = 105/254 (41%)
Query: 584 IDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSDE---ACFGRSLFEXXXX 640
IDEA+QL + +L GD QLP +E + E A G L
Sbjct: 221 IDEASQLALYVLGSLATMLPKSRMILVGDMHQLPPYMEEALPAELKRAAIGEPLTLAVKG 280
Query: 641 XXXXXXXXXIQYRMHPSISFFPNSYFYENKIHDS-PTVEKRSYEKRFLPGPMYGPYSFIN 699
+R I+ FY N + S P V K + P P F+N
Sbjct: 281 RRWPSMHLTRVHRCPKMITEVLGDLFYGNTLTSSKPGVTDIPVLKA-MGLPSRHPMVFVN 339
Query: 700 VFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLSIGIVSPYIAQVAAIQEKLG 759
+ + + S N E ++++ L + + +K++ I++ Y AQ +
Sbjct: 340 -YTSPQTAVGKSFSNEGEARYALQLVEALTRYASTANKKITAAILNFYGAQYS------- 391
Query: 760 SKYVNS-AGFAVKVMSVDGFQGGEEDIIIISTVRSNNGGSIGFISNPRRVNVALTRARHC 818
YV S A V V ++DG QG E D+ I+ RS+ F+ N R+NVAL+R +
Sbjct: 392 --YVYSMAEDEVTVNTIDGCQGQEYDVTIVLLTRSDPYERSKFLVNANRINVALSRPKIA 449
Query: 819 LWILGNERTLTRNR 832
I+G +R LT N+
Sbjct: 450 TVIIG-QRHLTGNQ 462
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 136 (52.9 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 43/136 (31%), Positives = 77/136 (56%)
Query: 697 FINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKGWINSKEKLS-IGIVSPYIAQVAAIQ 755
F+N + + IE S ++ + ++ L +G + S IG+++ Y AQ+ ++
Sbjct: 1317 FLN-YDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLK 1375
Query: 756 EKLGSKYVNSAGFAVKVMSVDGFQGGEEDIIIISTVRSN---NGGSIGFISNPRRVNVAL 812
K+ +K V +++++ D FQG ++ IIIS VR N NGG++ + RRVNVA+
Sbjct: 1376 -KIFNKNVYDG---LEILTADQFQGRDKKCIIISMVRRNSQLNGGAL--LKELRRVNVAM 1429
Query: 813 TRARHCLWILGNERTL 828
TRA+ L I+G++ T+
Sbjct: 1430 TRAKSKLIIIGSKSTI 1445
Score = 64 (27.6 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 231 LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTIVAIKEL 271
LI G PGTGKT ++ ++ IL+ R L+ + T A+ +
Sbjct: 1071 LILGMPGTGKTTVIAEIIKILVSEGKRVLLTSYTHSAVDNI 1111
Score = 39 (18.8 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 4 EGEANNSRSKKKRAVPYDYGFTDTVFSWSLEDIFNE 39
E ++N R KK + +Y +D SL ++ NE
Sbjct: 337 EEDSNCQRIKKNEKI--EYNSSDEFSDDSLIELLNE 370
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 2576 2451 0.00081 127 3 11 22 0.37 34
41 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 181
No. of states in DFA: 639 (68 KB)
Total size of DFA: 979 KB (2397 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 199.12u 0.18s 199.30t Elapsed: 00:00:14
Total cpu time: 199.17u 0.19s 199.36t Elapsed: 00:00:14
Start: Mon May 20 20:08:01 2013 End: Mon May 20 20:08:15 2013
WARNINGS ISSUED: 1