BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000055
(2548 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6PNC0|DMXL1_MOUSE DmX-like protein 1 OS=Mus musculus GN=Dmxl1 PE=1 SV=1
Length = 3013
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 153/301 (50%), Gaps = 32/301 (10%)
Query: 1134 LAGVTDAEKMEILAVVDLLNEF-----DNKHSASVYENLDEPGQRFWVELRFQLLCFFRR 1188
L G+T E+M ++A+ D + +++ E LDE G +F + +R
Sbjct: 1496 LPGLTRMEQMSLMALADTIATTSTDIGESRDRNQGGETLDECGLKFLLAVRLHTFLTTSL 1555
Query: 1189 FGKLVSAEELAVDSRLIAWAFHSECQETLFGSILP----NEPTWPEMRALGVGFWYTDVT 1244
+ + AWAFHS +E L ++LP ++PTW E+RA+GVG+W +
Sbjct: 1556 PAYRAQLLHQGLSTGHFAWAFHSVAEEELL-NMLPAMQKDDPTWSELRAMGVGWWVRNAR 1614
Query: 1245 QLRTRMEKLARLQYLKKKDPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRNFQ 1304
LR +EK+A+ + + DP D A+ Y+A+ + V+ GL++ KD K + F NF+
Sbjct: 1615 ILRRCIEKVAKAAFHRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTK---MTQFFGHNFE 1671
Query: 1305 EEKNKAAALKNAYVLLGRHQLELAIAFFLLGGDAASAVTVCARNLGDVQLALVICRLVEK 1364
EE+ + AALKNA+ LLG+ + E + AFFLLGG A+ VC L D+QLALVI RL E
Sbjct: 1672 EERWRKAALKNAFSLLGKQRFEHSAAFFLLGGCLKDAIEVCLEKLNDIQLALVIARLFES 1731
Query: 1365 HGGPLERNLVTKFILPSSI----------------ERGDYWLTSLLEWELGNYSQSFLTM 1408
+++ K IL + D +L S+ W L +YS + T+
Sbjct: 1732 E---FDKSATYKSILRKKVLGIGSPASELSSSSINAHHDPFLRSMAHWILEDYSAALETL 1788
Query: 1409 L 1409
+
Sbjct: 1789 I 1789
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 139/330 (42%), Gaps = 72/330 (21%)
Query: 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFD 2280
+ R +SHP P++L G+ + + ++E+G + + N + I+ ++F+
Sbjct: 2732 NVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFR--SGGN-------SRITRMRFN 2782
Query: 2281 HYGHRFASAALDGTVCTWQLE-----VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIA 2335
+ G++F DG + +Q V G S +P + C + A D +++SS S+IA
Sbjct: 2783 YQGNKFGIVDADGYLSLYQTNWKCCPVTG-SMPKPYLAWQCHNKTANDFVFVSSS-SLIA 2840
Query: 2336 AAGHSSNGINVVVWDTLAPPTSSRA-SITCHEGGARSISVFDNDLGSGSVSPLIVTGGKG 2394
AG SS+ N+ +WDTL P +S + TCH+ GA L L+++GG+
Sbjct: 2841 TAGLSSDNRNICLWDTLVAPANSLVHAFTCHDSGATV-------LAYAPKHQLLISGGRK 2893
Query: 2395 GDVGIHDFRYIATGKTKKHKHSDRGGSSINTCAHADAQTGSGSKPGDQNGMLWYIPKAHL 2454
G I D R + + ++H
Sbjct: 2894 GFTCIFDLRQRQQRQ---------------------------------------LFQSHD 2914
Query: 2455 GSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHWSKLHERHTFLQPSSRGFGGVVR 2514
V I+ P F+TGS +G++K+W + L++ + H R + R G
Sbjct: 2915 SPVKAIAIDPTEEYFVTGSAEGNIKIWSLSSFSLLHTFINEHARQSIF----RNIG---- 2966
Query: 2515 AGVTDIQV-VSRGFLSCGGDGSVKLIQLED 2543
GV I+ + SCG DG++K+ L D
Sbjct: 2967 TGVMQIETGPANHIFSCGADGTMKMRILPD 2996
Score = 39.7 bits (91), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 228 SDGKSEYIKLELCHPQPVSMVQWRPSTRRHSPGDTKRSQRHVLLTCCLDGTVRLWCE 284
S G+ ++ + L HP+ V+ WR T ++ P + S +VLLTCC D RLW E
Sbjct: 215 SQGEIDFSFVYLAHPRAVNGFSWR-KTSKYMP---RASVCNVLLTCCKDNVCRLWVE 267
>sp|Q8TDJ6|DMXL2_HUMAN DmX-like protein 2 OS=Homo sapiens GN=DMXL2 PE=1 SV=2
Length = 3036
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 185/400 (46%), Gaps = 58/400 (14%)
Query: 1134 LAGVTDAEKMEILAVVDLL----NEFDNKH--SASVYENLDEPGQRFWVELRFQLLCFFR 1187
L G+T E+M ++A+ D + E D S S + LDE G R+ + +R C
Sbjct: 1523 LPGLTRLEQMFLVALADTVATTSTELDESRDKSCSGRDTLDECGLRYLLAMRLHT-CLLT 1581
Query: 1188 RFGKLVSAEEL--AVDSRLIAWAFHSECQETLFG---SILPNEPTWPEMRALGVGFWYTD 1242
L + L V + AWAFHSE +E L +I +P W E+RA+G+G+W +
Sbjct: 1582 SLPPLYRVQLLHQGVSTCHFAWAFHSEAEEELINMIPAIQRGDPQWSELRAMGIGWWVRN 1641
Query: 1243 VTQLRTRMEKLARLQYLKKKDPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRN 1302
+ LR +EK+A+ + + D D AL Y+++ + V+ GLF+ DEK + F S N
Sbjct: 1642 INTLRRCIEKVAKASFQRNNDALDAALFYLSMKKKAVVWGLFRSQHDEK---MTTFFSHN 1698
Query: 1303 FQEEKNKAAALKNAYVLLGRHQLELAIAFFLLGGDAASAVTVCARNLGDVQLALVICRLV 1362
F E++ + AALKNA+ LLG+ + E + AFFLL G A+ VC + D+QLA+VI RL
Sbjct: 1699 FNEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMEDIQLAMVIARLY 1758
Query: 1363 EKHGGPLERNLVTKFILPSSI--------------ERGDYWLTSLLEWELGNYSQSFLTM 1408
E E + IL I D +L SL W + +Y+++ T+
Sbjct: 1759 ESE---FETSSTYISILNQKILGCQKDGSGFSCKRLHPDPFLRSLAYWVMKDYTRALDTL 1815
Query: 1409 LGFQSTAVINNFAL---SSNSVAF-----------------MDPSIGLYCLMLANKNSMR 1448
L Q+ + + S N VAF P L L L + +
Sbjct: 1816 LE-QTPKEDDEHQVIIKSCNPVAFSFYNYLRTHPLLIRRNLASPEGTLATLGLKTEKNFV 1874
Query: 1449 NAIGEKNAAILGRWAALMRATALNRCGLPLEALDCLSSSP 1488
+ I ++ R A A + G P+ AL+ LS P
Sbjct: 1875 DKIN-----LIERKLFFTTANAHFKVGCPVLALEVLSKIP 1909
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 67/319 (21%)
Query: 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFD 2280
+ + +SHP+ ++L G+ + + ++E+ + + + A N A ++ L F+
Sbjct: 2765 NVKRMTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVCFR--QAGN-------ARVTRLYFN 2815
Query: 2281 HYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHS 2340
G++ A +G + WQ+ SN +P S C S D ++ITSS S++A +GHS
Sbjct: 2816 SQGNKCGVADGEGFLSIWQVNQTA-SNPKPYMSWQCHSKATSDFAFITSS-SLVATSGHS 2873
Query: 2341 SNGINVVVWDTLAPPTSSRA-SITCHEGGARSISVFDNDLGSGSVSPLIVTGGKGGDVGI 2399
++ NV +WDTL P +S TCH+ GA L L+++GG+ G V I
Sbjct: 2874 NDNRNVCLWDTLISPGNSLIHGFTCHDHGATV-------LQYAPKQQLLISGGRKGHVCI 2926
Query: 2400 HDFRYIATGKTKKHKHSDRGGSSINTCAHADAQTGSGSKPGDQNGMLWYIPKAHLGSVTR 2459
D R L + +AH ++
Sbjct: 2927 FDIR---------------------------------------QRQLIHTFQAHDSAIKA 2947
Query: 2460 ISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHWSKLHERHTFLQPSSRGFGGVVRAGVTD 2519
++ P F TGS +G++K+W L++ + H + + R G AGV
Sbjct: 2948 LALDPYEEYFTTGSAEGNIKVWRLTGHGLIHSFKSEHAKQSIF----RNIG----AGVMQ 2999
Query: 2520 IQVVSRGFL-SCGGDGSVK 2537
I ++ L SCG DG++K
Sbjct: 3000 IDIIQGNRLFSCGADGTLK 3018
Score = 35.8 bits (81), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 239 LCHPQPVSMVQWRPSTRRHSPGDTKRSQRHVLLTCCLDGTVRLWCE 284
L HP+ V+ WR +++ G S +VLLT C DG RLW E
Sbjct: 229 LAHPRAVTGFSWRKTSKYMPRG----SVCNVLLTSCHDGVCRLWAE 270
>sp|Q8BPN8|DMXL2_MOUSE DmX-like protein 2 OS=Mus musculus GN=Dmxl2 PE=1 SV=3
Length = 3032
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 152/301 (50%), Gaps = 32/301 (10%)
Query: 1134 LAGVTDAEKMEILAVVDLL----NEFDNKHSA--SVYENLDEPGQRFWVELRFQLLCFFR 1187
L G+T E+M ++A+ D + E D S + LDE G R+ + +R C
Sbjct: 1522 LPGLTRLEQMFLVALADTVATTSTELDENRDKNYSGRDTLDECGLRYLLAMRLHT-CLLT 1580
Query: 1188 RFGKLVSAEEL--AVDSRLIAWAFHSECQETLFG---SILPNEPTWPEMRALGVGFWYTD 1242
L + L V + AWAFHSE +E L +I +P W E+RA+G+G+W +
Sbjct: 1581 SLPPLYRVQLLHQGVSTCHFAWAFHSEAEEELINMIPAIQRGDPQWSELRAMGIGWWVRN 1640
Query: 1243 VTQLRTRMEKLARLQYLKKKDPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRN 1302
V LR +EK+A+ + + + D AL Y+++ + V+ GLF+ DEK + F S N
Sbjct: 1641 VNTLRRCIEKVAKAAFQRNNEALDAALFYLSMKKKAVVWGLFRSQHDEK---MTTFFSHN 1697
Query: 1303 FQEEKNKAAALKNAYVLLGRHQLELAIAFFLLGGDAASAVTVCARNLGDVQLALVICRLV 1362
F E++ + AALKNA+ LLG+ + E + AFFLL G A+ VC + D+QLA+VI RL
Sbjct: 1698 FNEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMEDIQLAMVIARLF 1757
Query: 1363 EKHGGPLERNLVTKFILPSSI--------------ERGDYWLTSLLEWELGNYSQSFLTM 1408
E E + IL I D +L SL W + +Y+++ T+
Sbjct: 1758 ESE---FETSSTYISILNQKILGCQKDGTGFDCKRLHPDPFLRSLAYWVVKDYTRALDTL 1814
Query: 1409 L 1409
L
Sbjct: 1815 L 1815
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 135/319 (42%), Gaps = 67/319 (21%)
Query: 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFD 2280
+ + +SHP+ ++L G+ + + ++E+ + + + A N A ++ L F+
Sbjct: 2761 NVKRMTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVCFR--QAGN-------ARVTRLYFN 2811
Query: 2281 HYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHS 2340
G++ A +G + WQ+ SN +P S C S D ++ITSS S++A +GHS
Sbjct: 2812 SQGNKCGVADGEGFLSIWQVNQTA-SNPKPYMSWQCHSKATSDFAFITSS-SLVATSGHS 2869
Query: 2341 SNGINVVVWDTLAPPTSSRA-SITCHEGGARSISVFDNDLGSGSVSPLIVTGGKGGDVGI 2399
++ NV +WDTL P +S TCH+ GA L L+++GG+ G + I
Sbjct: 2870 NDNRNVCLWDTLISPGNSLIHGFTCHDHGATV-------LQYAPKQQLLISGGRKGYICI 2922
Query: 2400 HDFRYIATGKTKKHKHSDRGGSSINTCAHADAQTGSGSKPGDQNGMLWYIPKAHLGSVTR 2459
D R L + +AH ++
Sbjct: 2923 FDIR---------------------------------------QRQLIHTFQAHDSAIKA 2943
Query: 2460 ISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHWSKLHERHTFLQPSSRGFGGVVRAGVTD 2519
++ F TGS +G++K+W L++ + H + + R G AGV
Sbjct: 2944 LALDSCEEYFTTGSAEGNIKVWRLTGHGLIHSFKSEHAKQSIF----RNIG----AGVMQ 2995
Query: 2520 IQVVSRGFL-SCGGDGSVK 2537
I + L SCG DG++K
Sbjct: 2996 IAISQDNRLFSCGADGTLK 3014
Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 239 LCHPQPVSMVQWRPSTRRHSPGDTKRSQRHVLLTCCLDGTVRLWCE 284
L HP+ V+ WR +++ G S +VLLT C DG RLW E
Sbjct: 229 LAHPRAVTGFSWRKTSKYMPRG----SVCNVLLTSCHDGVCRLWAE 270
>sp|Q9Y485|DMXL1_HUMAN DmX-like protein 1 OS=Homo sapiens GN=DMXL1 PE=1 SV=3
Length = 3027
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 184/403 (45%), Gaps = 54/403 (13%)
Query: 1134 LAGVTDAEKMEILAVVDLLNEF-----DNKHSASVYENLDEPGQRFWVELRFQLLCFFRR 1188
L G++ E+M ++A+ D + +++ + E LDE G +F + +R
Sbjct: 1498 LPGLSRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSL 1557
Query: 1189 FGKLVSAEELAVDSRLIAWAFHSECQETLFGSILP----NEPTWPEMRALGVGFWYTDVT 1244
+ + AWAFHS +E L ++LP ++PTW E+RA+GVG+W +
Sbjct: 1558 PAYRAQLLHQGLSTSHFAWAFHSVAEEELL-NMLPAMQKDDPTWSELRAMGVGWWVRNTR 1616
Query: 1245 QLRTRMEKLARLQYLKKKDPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRNFQ 1304
LR +EK+A+ + +K DP D A+ Y+A+ + V+ GL++ EK+ + F NF+
Sbjct: 1617 ILRKCIEKVAKAAFYRKNDPLDAAIFYLAMKKKAVIWGLYRA---EKNTRMTQFFGHNFE 1673
Query: 1305 EEKNKAAALKNAYVLLGRHQLELAIAFFLLGGDAASAVTVCARNLGDVQLALVICRLVEK 1364
+E+ + AALKNA+ LLG+ + E + AFFLL G A+ VC L D+QLALVI RL E
Sbjct: 1674 DERWRKAALKNAFSLLGKQRFEHSAAFFLLAGCLRDAIEVCLEKLNDIQLALVIARLYES 1733
Query: 1365 HGGPLERNLVTKFILPSSI----------------ERGDYWLTSLLEWELGNYSQSFLTM 1408
+ + K IL + D +L S+ W L +YS + T+
Sbjct: 1734 E---FDTSAAYKSILRKKVLGIDSPVSELCSLNINMHHDPFLRSMAYWILEDYSGALETL 1790
Query: 1409 LGFQSTAVINNFALSSNSVAFMDPSIGLYCLMLANKNSMRNAIGEKNA-----AILG--- 1460
+ + +SN F Y + + +R G + ++ G
Sbjct: 1791 IKQPIRENDDQVLSASNPTVF-----NFYNYLRTHPLLLRRHFGSSDTFSTHMSLTGKSG 1845
Query: 1461 ---------RWAALMRATALNRCGLPLEALDCLSSSPSTIGGT 1494
R A+A + G P+ AL+ LS P I T
Sbjct: 1846 LAGTINLSERRLFFTTASAHLKAGCPMLALEVLSKMPKVIKKT 1888
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 72/330 (21%)
Query: 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFD 2280
+ R +SHP P++L G+ + + ++E+G + + N + ++ ++F+
Sbjct: 2746 NVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFR--SGGN-------SRVTRMRFN 2796
Query: 2281 HYGHRFASAALDGTVCTWQLE-----VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIA 2335
+ G++F DG + +Q V G S +P + C + A D +++SS S+IA
Sbjct: 2797 YQGNKFGIVDADGYLSLYQTNWKCCPVTG-SMPKPYLTWQCHNKTANDFVFVSSS-SLIA 2854
Query: 2336 AAGHSSNGINVVVWDTLAPPTSSRA-SITCHEGGARSISVFDNDLGSGSVSPLIVTGGKG 2394
AG S++ NV +WDTL P +S + TCH+ GA L L+++GG+
Sbjct: 2855 TAGLSTDNRNVCLWDTLVAPANSLVHAFTCHDSGATV-------LAYAPKHQLLISGGRK 2907
Query: 2395 GDVGIHDFRYIATGKTKKHKHSDRGGSSINTCAHADAQTGSGSKPGDQNGMLWYIPKAHL 2454
G F Y+ + C Q + ++H
Sbjct: 2908 G------FTYV-----------------FDLCQRQQRQ----------------LFQSHD 2928
Query: 2455 GSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHWSKLHERHTFLQPSSRGFGGVVR 2514
V ++ P F+TGS +G++K+W L++ + H R + R G
Sbjct: 2929 SPVKAVAVDPTEEYFVTGSAEGNIKIWSLSTFGLLHTFVSEHARQSIF----RNIG---- 2980
Query: 2515 AGVTDIQV-VSRGFLSCGGDGSVKLIQLED 2543
GV I+ + SCG DG++K+ L D
Sbjct: 2981 TGVMQIETGPANHIFSCGADGTMKMRILPD 3010
Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 228 SDGKSEYIKLELCHPQPVSMVQWRPSTRRHSPGDTKRSQRHVLLTCCLDGTVRLWCE 284
S G+ ++ + L HP+ V+ WR T ++ P + S +VLLTCC D RLW E
Sbjct: 217 SQGEIDFSFVYLAHPRAVNGFSWR-KTSKYMP---RASVCNVLLTCCKDNVCRLWVE 269
>sp|P47104|RAV1_YEAST Regulator of V-ATPase in vacuolar membrane protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAV1 PE=1 SV=1
Length = 1357
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 141/278 (50%), Gaps = 12/278 (4%)
Query: 1203 RLIAWAFHSECQETLFGSILPNEPTWPEMRALGVGFWYTDVTQLRTRMEKLARLQYLK-- 1260
R ++WA HS+ +E L SI + +W R + +W + L + E +A+ ++ K
Sbjct: 904 RDVSWALHSDNKEILLSSIDRHITSWNRAREYRIAYWIKE-QDLVKKFEDIAKYEFSKDD 962
Query: 1261 KKDPKDCALLYIALNRIQVLAGLFK--ISKDEKDKPLVGFLSRNFQEEKNKAAALKNAYV 1318
K+DP CA+ Y+AL + Q+L L+K I E+ K +V F+S +F + + AALKNA+V
Sbjct: 963 KRDPSRCAIFYLALKKKQILLSLWKMAIGHPEQQK-MVRFISNDFTVPRWRTAALKNAFV 1021
Query: 1319 LLGRHQLELAIAFFLLGGDAASAVTVCARNLGDVQLALVICRLVEKHGGPLERNLVTKFI 1378
LL +H+ A FFLL V V + + D+ LA+ +CR+ E GP+ L+T +
Sbjct: 1022 LLSKHRYMDAAVFFLLTDSLKDCVNVLCKQVHDMDLAIGVCRVYEGDNGPVLGELLTAQM 1081
Query: 1379 LPSSIERGDYWLTSLLEWELGNYSQSFLTMLGF-----QSTAVINNFALSSNSVAFMDPS 1433
LP +I+ D W S + W+L + +L ++++++ + S DP+
Sbjct: 1082 LPETIKENDRWKASFIYWKLRKQEVAIKALLTAPIDLENNSSIVDKEVCVNRSFLVEDPA 1141
Query: 1434 IGLYCLMLANKNSMRNAIGEKNAAILGRWAALMRATAL 1471
+ L N+N ++ IG N ++R T +
Sbjct: 1142 LLYLYNHLRNRN-LKYFIGSLNVEAKIECTLILRVTDI 1178
>sp|Q9Y817|RAV1_SCHPO Regulator of V-ATPase in vacuolar membrane protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rav1 PE=1 SV=1
Length = 1297
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 142/271 (52%), Gaps = 19/271 (7%)
Query: 1128 LQNVYELAGVTDAEKMEILAVVDLLNEFDNKHSASVYENLDEPGQRFWVELRFQLLCFFR 1187
L V ++ +T + + +L +++ N+ + ++ ++LD G+R+ + L +L +
Sbjct: 865 LLKVKKVKTLTRSSQFLLLNLIEAFNK-----ARALRDSLDLNGKRYCIMLNQYVLSKHQ 919
Query: 1188 RFGKLVSAEELAVDSRLIAWAFHSECQETLFGSI--LPNEPT-WPEMRALGVGFWYTDVT 1244
R + ++ +R +AWAFHS + L L +P W + + FW +
Sbjct: 920 R-------QLTSLPTREMAWAFHSSNKAVLLDHTKKLHGKPLLWNAVEEYAIPFWLNE-Q 971
Query: 1245 QLRTRMEKLARLQY--LKKKDPKDCALLYIALNRIQVLAGLFKISKDEKDKP-LVGFLSR 1301
L+ +L+R Y + ++P++ +L +IAL++I V L++++ K+ V LS
Sbjct: 972 LLKDVFLELSRNHYAEIDDRNPENVSLYHIALHKINVFRDLWRLASWHKESARTVKLLSN 1031
Query: 1302 NFQEEKNKAAALKNAYVLLGRHQLELAIAFFLLGGDAASAVTVCARNLGDVQLALVICRL 1361
+F ++K K A KNA+ LL +H+ A AFFLL A VC RNL + LA+ + R+
Sbjct: 1032 DFSKKKWKVVASKNAFALLSKHRYFYASAFFLLADSCYDAAKVCIRNLKSISLAIAMTRV 1091
Query: 1362 VEKHGGPLERNLVTKFILPSSIERGDYWLTS 1392
E GP + L+ +++LP ++ + D WLT+
Sbjct: 1092 YEGDDGPTLKRLINEYVLPLAVSQNDRWLTN 1122
>sp|Q03897|WDR59_YEAST Maintenance of telomere capping protein 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MTC5 PE=1 SV=1
Length = 1148
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 22/173 (12%)
Query: 2206 DFEDYVDPPATVENIS-----TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVL 2260
D +D PP + +I+ +S HP +P+++V +SN +W K + A VL
Sbjct: 51 DLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVL 110
Query: 2261 PAANVPPPYALASISALQFD-HYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSS 2319
+ +I+ + F+ + A+ ++D V W + RS RP S + S
Sbjct: 111 HGHS-------RAITDINFNPQHPDVLATCSVDTYVHAWDM----RSPHRPFYSTSSWRS 159
Query: 2320 HAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGGARSI 2372
A V + +V+A SS+G ++ VWD L ++ S+ H SI
Sbjct: 160 AASQVKWNYKDPNVLA----SSHGNDIFVWD-LRKGSTPLCSLKGHVSSVNSI 207
>sp|Q0CXH9|EIF3I_ASPTN Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=tif34 PE=3 SV=1
Length = 336
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 2433 TGSGSKPGDQNGMLWYIPKAHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHW 2492
T +G + G NG HLG+V + PNT L TGS D V+LW+ K + V W
Sbjct: 39 TANGERLGTYNG--------HLGAVWTVDVSPNTVLLATGSADNSVRLWNVKTGECVKVW 90
>sp|O15736|TIPD_DICDI Protein tipD OS=Dictyostelium discoideum GN=tipD PE=3 SV=1
Length = 612
Score = 42.4 bits (98), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 86/214 (40%), Gaps = 53/214 (24%)
Query: 2284 HRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNG 2343
+R + + D T+ W L+ G + CFSS D+ + SG+ +A+ GH +
Sbjct: 420 NRVVTGSHDRTIKLWDLQKG-----YCTRTIFCFSS-CNDLVILGGSGTHLAS-GHVDHS 472
Query: 2344 INVVVWDTLA-PPTSSRASITCHEGGARSISVFDNDLGSGSVSPLIVTGGKGGDVGIHDF 2402
V WD+ A PT +SI HEG SI+ S + + I+T + + I D
Sbjct: 473 --VRFWDSNAGEPTQVLSSI--HEGQITSIT------NSPTNTNQILTNSRDHTLKIIDI 522
Query: 2403 RYIATGKTKKHKHSDRGGSSINTCAHADAQTGSGSKPGDQNGMLWYIPKAHLGSVTRIST 2462
R T +T K P +NG+ W T+ S
Sbjct: 523 RTFDTIRTFKD-------------------------PEYRNGLNW----------TKASW 547
Query: 2463 VPNTSLFLTGSKDGDVKLWDAKAAQLVYHWSKLH 2496
P+ +GS DG + +WDA + V +K+H
Sbjct: 548 SPDGRYIASGSIDGSICIWDATNGKTVKVLTKVH 581
>sp|A6NE52|K1875_HUMAN WD repeat-containing protein KIAA1875 OS=Homo sapiens GN=KIAA1875
PE=2 SV=2
Length = 1622
Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 2453 HLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLV 2489
H G VT ++ +PNT+L L+ S+DG ++ WD +AA V
Sbjct: 332 HTGPVTAMTVLPNTTLVLSASQDGTLRTWDLQAAAQV 368
>sp|Q7Z5U6|WDR53_HUMAN WD repeat-containing protein 53 OS=Homo sapiens GN=WDR53 PE=2 SV=1
Length = 358
Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 2451 KAHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHWSKLHERHTFLQPSSRGF- 2509
K H V+++ +P + L LTG DG + LWDA + V K + T + RG
Sbjct: 238 KGHTSGVSQVCFLPESYLLLTGGNDGKITLWDANSE--VEKKQKSPTKRTHRKKPKRGTC 295
Query: 2510 ---GGVVRAGVTD 2519
GG A VTD
Sbjct: 296 TKQGGNTNASVTD 308
>sp|P97499|TEP1_MOUSE Telomerase protein component 1 OS=Mus musculus GN=Tep1 PE=1 SV=1
Length = 2629
Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 2451 KAHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLV 2489
K HLGSVT + +P L +T SKD DVKLW+ + QL+
Sbjct: 2554 KIHLGSVTALHVLPG--LLVTASKDRDVKLWERPSMQLL 2590
>sp|Q4P553|HAT2_USTMA Histone acetyltransferase type B subunit 2 OS=Ustilago maydis (strain
521 / FGSC 9021) GN=HAT2 PE=3 SV=1
Length = 485
Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 15/171 (8%)
Query: 2283 GHRFASAALDGTVCTWQLEVGGRSN--VRPMESCLCFSSHAMDVSYITSSGSVIAAAGHS 2340
GH A A+ D TVC W + + N ++P + ++ DV++ S+ + G
Sbjct: 255 GHILA-ASEDTTVCHWDINNYTKPNNTLQPSATYTGHTAIVEDVAWHNHHESLFGSVG-- 311
Query: 2341 SNGINVVVWDTLAPPTSSRASITCHEGGARSISVFDNDLGSGSVSPLIVTGGKGGDVGIH 2400
+ +++WD P ++ + + H G +++ S ++VTG VG+
Sbjct: 312 -DDRQLLIWDIREPASAPKYRVEAHTGEVNALAF------SPENENILVTGSSDKSVGVW 364
Query: 2401 DFRYIATGKTKKHKHSDRGGSSINTCAHADAQTGSGSKPGDQNGMLWYIPK 2451
D R + K K H ++ C T S D+ LW + K
Sbjct: 365 DLRNL---KVKLHSLESHTDEILSVCWSPHHATVLASASADRRVNLWDLSK 412
>sp|Q5B8Y3|EIF3I_EMENI Eukaryotic translation initiation factor 3 subunit I OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL
194 / M139) GN=tif34 PE=3 SV=1
Length = 336
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 2452 AHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHW 2492
HLG++ + PNT L TGS D V+LW+ K + V W
Sbjct: 50 GHLGAIWTVDVSPNTVLLATGSADNSVRLWNVKTGECVKVW 90
>sp|Q12206|WTM2_YEAST Transcriptional modulator WTM2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=WTM2 PE=1 SV=1
Length = 467
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 2446 LWYIPKAHLGSVTRISTVPNT-SLFLTGSKDGDVKLWDAKAAQLVYHWSKLHERHTFLQP 2504
LW + + G +T + T +LF+TG G +KLWDA+A QL + L R +P
Sbjct: 281 LWTLSEPKNGRLTSFDSSQVTENLFVTGFSTGVIKLWDARAVQLAT--TDLTHRQNGEEP 338
Query: 2505 SSRGFGGVVRAG---VTDI---QVVSRGFLSCGGDGSV 2536
+ +G V DI Q + F++ GG G+V
Sbjct: 339 IQNEIAKLFHSGGDSVVDILFSQTSATEFVTVGGTGNV 376
>sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3
Length = 905
Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 52/191 (27%)
Query: 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATA------TYGVLPAANVPPPYALASISA 2276
R + HP +PF L S + I LW++ K + + T+ V+ P
Sbjct: 103 RCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD-------- 154
Query: 2277 LQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPME------SCLCFSSHAMDVSYITSS 2330
++FASA+LD T+ WQL G S +E +C+ + S D Y+ S
Sbjct: 155 ------NNQFASASLDRTIKVWQL--GSSSPNFTLEGHEKGVNCIDYYSGG-DKPYLIS- 204
Query: 2331 GSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGGARSIS--VFDNDLGSGSVSPLI 2388
++ V +WD ++ + EG A+++S F +L P+I
Sbjct: 205 ---------GADDRLVKIWD-----YQNKTCVQTPEGHAQNVSCATFHPEL------PII 244
Query: 2389 VTGGKGGDVGI 2399
+TG + G V I
Sbjct: 245 ITGSEDGTVRI 255
>sp|Q5BJQ6|CSTF1_RAT Cleavage stimulation factor subunit 1 OS=Rattus norvegicus GN=Cstf1
PE=2 SV=1
Length = 431
Score = 38.9 bits (89), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 2453 HLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHWSKLHE 2497
H ++ ++ P+ ++++TGSKDG +KLWD + + + + K H+
Sbjct: 261 HTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHD 305
>sp|Q99LC2|CSTF1_MOUSE Cleavage stimulation factor subunit 1 OS=Mus musculus GN=Cstf1 PE=2
SV=1
Length = 431
Score = 38.9 bits (89), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 2453 HLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHWSKLHE 2497
H ++ ++ P+ ++++TGSKDG +KLWD + + + + K H+
Sbjct: 261 HTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHD 305
>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2
Length = 905
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 52/191 (27%)
Query: 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATA------TYGVLPAANVPPPYALASISA 2276
R + HP +PF L S + I LW++ K + + T+ V+ P
Sbjct: 103 RCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD-------- 154
Query: 2277 LQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPME------SCLCFSSHAMDVSYITSS 2330
++FASA+LD T+ WQL G S +E +C+ + S D Y+ S
Sbjct: 155 ------NNQFASASLDRTIKVWQL--GSSSPNFTLEGHEKGVNCIDYYSGG-DKPYLIS- 204
Query: 2331 GSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGGARSISV--FDNDLGSGSVSPLI 2388
++ V +WD ++ + EG A+++S F +L P+I
Sbjct: 205 ---------GADDRLVKIWD-----YQNKTCVQTLEGHAQNVSCASFHPEL------PII 244
Query: 2389 VTGGKGGDVGI 2399
+TG + G V I
Sbjct: 245 ITGSEDGTVRI 255
>sp|O08653|TEP1_RAT Telomerase protein component 1 OS=Rattus norvegicus GN=Tep1 PE=1 SV=1
Length = 2629
Score = 38.5 bits (88), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 2451 KAHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLV 2489
K HLGSVT + +P L +T S+D DVKLW+ + QL+
Sbjct: 2554 KIHLGSVTALHVLPG--LLVTASEDRDVKLWERPSMQLL 2590
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 38.5 bits (88), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 79/204 (38%), Gaps = 45/204 (22%)
Query: 2251 DKATATYGVLPAANVPP---PYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSN 2307
DK Y + A +P + ++ F GH AS + DGT W G
Sbjct: 31 DKTIRLYSLSDFAELPHSPLKFHTYAVHCCSFSPSGHVLASCSTDGTTVLWSAHSGHTLT 90
Query: 2308 V------RPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRAS 2361
V P+ C CFS D +Y+ S AA G +VV+W+ +
Sbjct: 91 VLEQPGGSPVRVC-CFSP---DSTYLASG----AADG------SVVLWNAHSYKL----- 131
Query: 2362 ITCHEGGARSISVFDNDLGSGSVSP---LIVTGGKGGDVGIHDFRYIATGKTKKHKHSDR 2418
R SV D+ L + + SP L+VTG GGD+ + D R + HS++
Sbjct: 132 -------YRCGSVKDSSLVACAFSPDGGLLVTGSSGGDLTVWDDRM-------RCLHSEK 177
Query: 2419 GGSSINTCAHADAQTGSGSKPGDQ 2442
TC +Q SG + G Q
Sbjct: 178 AHDLGITCCSFSSQPLSGGEHGLQ 201
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 54/129 (41%), Gaps = 17/129 (13%)
Query: 2419 GGSSINTCAHADAQTGSGSKPGDQNGMLWYIPKAHL---GSVTRISTV-----PNTSLFL 2470
GGS + C + T S D + +LW L GSV S V P+ L +
Sbjct: 96 GGSPVRVCCFSPDSTYLASGAADGSVVLWNAHSYKLYRCGSVKDSSLVACAFSPDGGLLV 155
Query: 2471 TGSKDGDVKLWDAKAAQLVYHWSKLHERH-TFLQPSSRGFGGVVRAGVTDIQVVSRGFLS 2529
TGS GD+ +WD + L H K H+ T SS+ G G +Q+ S
Sbjct: 156 TGSSGGDLTVWDDRMRCL--HSEKAHDLGITCCSFSSQPLSG----GEHGLQLYR--LAS 207
Query: 2530 CGGDGSVKL 2538
CG D +KL
Sbjct: 208 CGQDCEIKL 216
>sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2
Length = 906
Score = 38.5 bits (88), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 52/191 (27%)
Query: 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATA------TYGVLPAANVPPPYALASISA 2276
R + HP +PF L S + I LW++ K + + T+ V+ P
Sbjct: 103 RCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD-------- 154
Query: 2277 LQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPME------SCLCFSSHAMDVSYITSS 2330
++FASA+LD T+ WQL G S +E +C+ + S D Y+ S
Sbjct: 155 ------NNQFASASLDRTIKVWQL--GSSSPNFTLEGHEKGVNCIDYYSGG-DKPYLIS- 204
Query: 2331 GSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGGARSISV--FDNDLGSGSVSPLI 2388
++ V +WD ++ + EG A+++S F +L P+I
Sbjct: 205 ---------GADDRLVKIWD-----YQNKTCVQTLEGHAQNVSCASFHPEL------PII 244
Query: 2389 VTGGKGGDVGI 2399
+TG + G V I
Sbjct: 245 ITGSEDGTVRI 255
>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1
Length = 906
Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 52/191 (27%)
Query: 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATA------TYGVLPAANVPPPYALASISA 2276
R + HP +PF L S + I LW++ K + + T+ V+ P
Sbjct: 103 RCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD-------- 154
Query: 2277 LQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPME------SCLCFSSHAMDVSYITSS 2330
++FASA+LD T+ WQL G S +E +C+ + S D Y+ S
Sbjct: 155 ------NNQFASASLDRTIKVWQL--GSSSPNFTLEGHEKGVNCIDYYSGG-DKPYLIS- 204
Query: 2331 GSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGGARSISV--FDNDLGSGSVSPLI 2388
++ V +WD ++ + EG A+++S F +L P+I
Sbjct: 205 ---------GADDRLVKIWD-----YQNKTCVQTLEGHAQNVSCASFHPEL------PII 244
Query: 2389 VTGGKGGDVGI 2399
+TG + G V I
Sbjct: 245 ITGSEDGTVRI 255
>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3
Length = 906
Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 52/191 (27%)
Query: 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATA------TYGVLPAANVPPPYALASISA 2276
R + HP +PF L S + I LW++ K + + T+ V+ P
Sbjct: 103 RCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD-------- 154
Query: 2277 LQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPME------SCLCFSSHAMDVSYITSS 2330
++FASA+LD T+ WQL G S +E +C+ + S D Y+ S
Sbjct: 155 ------NNQFASASLDRTIKVWQL--GSSSPNFTLEGHEKGVNCIDYYSGG-DKPYLIS- 204
Query: 2331 GSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGGARSISV--FDNDLGSGSVSPLI 2388
++ V +WD ++ + EG A+++S F +L P+I
Sbjct: 205 ---------GADDRLVKIWD-----YQNKTCVQTLEGHAQNVSCASFHPEL------PII 244
Query: 2389 VTGGKGGDVGI 2399
+TG + G V I
Sbjct: 245 ITGSEDGTVRI 255
>sp|O14301|YE85_SCHPO Uncharacterized WD repeat-containing protein C9G1.05
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC9G1.05 PE=3 SV=1
Length = 595
Score = 38.5 bits (88), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 2438 KPGDQNGMLWYIPKAHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHW 2492
K GDQ Y AH GS+ IS P++S F+T S K+WDA L+ W
Sbjct: 219 KTGDQV----YEIDAHKGSIFSISWSPDSSQFVTSSAGYSCKIWDANTGSLIREW 269
>sp|A5ABH4|RGLB_ASPNC Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=rglB PE=3 SV=1
Length = 706
Score = 38.5 bits (88), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 1745 HFASAWLQRDSKGLLQVLQPVLITYTNGHTPYEVDMNNLKTFFHQSAELLTRNTSIDNMV 1804
HF W RD + L + Y N TPY ++ +T F + EL T +S +
Sbjct: 119 HFQQYWFLRDGETGLHTFS--RLAYYNETTPYLRNLQEFRTLFRPNTELWTHLSSSEVQT 176
Query: 1805 GDLQVSKFVDDE----RSTDLMNSIPEDERW 1831
L K V++E +T N+ P DE +
Sbjct: 177 APLPSKKAVEEEVVVQDATWTFNNTPTDEYY 207
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 27/136 (19%)
Query: 2373 SVFDNDLGSG---SVSP---LIVTGGKGGDVGIHDFRYIATGKT----KKHKHSDRGGSS 2422
SVF LGS + SP L TG GG I F ATGK K H S
Sbjct: 858 SVFTKILGSVLTVAFSPDGKLFATGDSGG---IVRFWEAATGKELLTCKGHN------SW 908
Query: 2423 INTCAHADAQTGSGSKPGDQNGMLWYIP-----KAHLGSVTRISTV---PNTSLFLTGSK 2474
+N+ + S DQ LW I K G +R+ +V PN+ + +GS
Sbjct: 909 VNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSS 968
Query: 2475 DGDVKLWDAKAAQLVY 2490
D V+LWD + + +Y
Sbjct: 969 DQTVRLWDISSGECLY 984
>sp|Q4R4I8|COPB2_MACFA Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1
Length = 906
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 52/191 (27%)
Query: 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATA------TYGVLPAANVPPPYALASISA 2276
R + HP +PF L S + I LW++ K + + T+ V+ P
Sbjct: 103 RCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD-------- 154
Query: 2277 LQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPME------SCLCFSSHAMDVSYITSS 2330
++FASA+LD T+ WQL G S +E +C+ + S D Y+ S
Sbjct: 155 ------NNQFASASLDRTIKVWQL--GSSSPNFTLEGHEKGVNCIDYYSGG-DKPYLIS- 204
Query: 2331 GSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGGARSISV--FDNDLGSGSVSPLI 2388
++ V +WD ++ + EG A+++S F +L P+I
Sbjct: 205 ---------GADDRLVKIWD-----YQNKTCVQTLEGHAQNVSCASFHPEL------PII 244
Query: 2389 VTGGKGGDVGI 2399
+TG + G V I
Sbjct: 245 ITGSEDGTVRI 255
>sp|Q2UQ34|EIF3I_ASPOR Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=tif34 PE=3 SV=1
Length = 335
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 2433 TGSGSKPGDQNGMLWYIPKAHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHW 2492
+ +G + G NG H G++ + PNT L TGS D V+LW+ K + + W
Sbjct: 39 SANGERLGTYNG--------HQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECIKVW 90
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 2420 GSSINTCAHADAQTGSGSKPGDQNGMLWYIPKAHLGSVTRISTVPNTSLFLTGSKDGDVK 2479
GS TC DA TG L+Y K H + +S P +++ TGS D K
Sbjct: 155 GSFDKTCKLWDAYTG----------QLYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAK 204
Query: 2480 LWDAKAAQ 2487
LWD + Q
Sbjct: 205 LWDVETGQ 212
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 94/244 (38%), Gaps = 57/244 (23%)
Query: 2272 ASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSG 2331
++ L ++ G SA+ D TV W E G R V+ ++ F ++ Y G
Sbjct: 111 GAVMELHYNTDGSMLFSASTDKTVAVWDSETGER--VKRLKGHTSF----VNSCYPARRG 164
Query: 2332 SVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGGARSISVFDNDLGSGSVSPLIVTG 2391
+ G S+ V +WD +A+I + + ++V ND S I++G
Sbjct: 165 PQLVCTG--SDDGTVKLWD-----IRKKAAIQTFQNTYQVLAVTFND-----TSDQIISG 212
Query: 2392 GKGGDVGIHDFRYIATGKTKKHKHSDRGGSSINTCAHADAQTG-SGSKPG--------DQ 2442
G D+ + D R K ++ RG HAD+ TG S S G D
Sbjct: 213 GIDNDIKVWDLR------QNKLTYTMRG--------HADSVTGLSLSSEGSYLLSNAMDN 258
Query: 2443 NGMLW----YIPKAHL------------GSVTRISTVPNTSLFLTGSKDGDVKLWDAKAA 2486
+W + PK ++ R S P+ S GS D V +WD +
Sbjct: 259 TVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 2487 QLVY 2490
+++Y
Sbjct: 319 RILY 322
>sp|Q6PH57|GBB1_DANRE Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
OS=Danio rerio GN=gnb1 PE=2 SV=1
Length = 340
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 2437 SKPGDQNGMLWYIPKA--------HLGSVTRISTVPNTSLFLTGSKDGDVKLWDAK 2484
+ GD LW I H G V +S P+T LF++G+ D KLWD +
Sbjct: 159 TSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
>sp|Q9Y6I7|WSB1_HUMAN WD repeat and SOCS box-containing protein 1 OS=Homo sapiens GN=WSB1
PE=1 SV=1
Length = 421
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 22/122 (18%)
Query: 2237 GSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALAS-------ISALQFDHYGHRFASA 2289
S +T +Y+W+ +G L PPP + + + ++ F H G AS
Sbjct: 274 ASYDTRVYIWDPHNGDILMEFGHL----FPPPTPIFAGGANDRWVRSVSFSHDGLHVASL 329
Query: 2290 ALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVW 2349
A D V W+++ V P+ + LC + ++ GSV+AA H +V W
Sbjct: 330 ADDKMVRFWRIDEDYPVQVAPLSNGLCCA--------FSTDGSVLAAGTHDG---SVYFW 378
Query: 2350 DT 2351
T
Sbjct: 379 AT 380
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 732 CSKIPPYT--MATGYSDGSLRLWRSELGGSSTSCMPWELVGMLVAHQGPVSAISLTDGGR 789
C K P + +ATG +D ++RLW ++ G S V + H+GPV ++S + G+
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSAQQGNS---------VRLFTGHRGPVLSLSFSPNGK 481
Query: 790 KIAT 793
+A+
Sbjct: 482 YLAS 485
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 64/162 (39%), Gaps = 31/162 (19%)
Query: 2348 VWDTLAPPTSSRASITCHEGGARSISVFDNDLGSGSVSPLIVTGGKGGDVGIHDFR---- 2403
VWD P S + H+ AR S FD PL + G DV F
Sbjct: 387 VWDVDISPFSLYFASGSHDRTARLWS-FDR------TYPLRIYAGHLADVDCVKFHPNSN 439
Query: 2404 YIATGKTKKHKH--SDRGGSSIN--TCAHADAQTGSGSKPG--------DQNGMLWYIP- 2450
Y+ATG T K S + G+S+ T + S S G DQ LW +
Sbjct: 440 YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLAS 499
Query: 2451 -------KAHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKA 2485
+ H S+T ++ P++ L + S D V++WD ++
Sbjct: 500 GTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 541
>sp|Q9UVG6|VPS15_PICPA Putative serine/threonine-protein kinase VPS15 OS=Komagataella
pastoris GN=VPS15 PE=3 SV=3
Length = 1340
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 15/92 (16%)
Query: 2453 HLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHWSKLHERHTFLQPSSRGFGGV 2512
H GS+T ++ P+ FLTG G ++LWD QL ER+ + ++
Sbjct: 941 HTGSITSLALSPDQQYFLTGDSKGIIRLWD--VLQL--------ERNGY---ATSHVTVS 987
Query: 2513 VRAGVTDIQVVS--RGFLSCGGDGSVKLIQLE 2542
+ + V DI+ + F + DG +K+ ++E
Sbjct: 988 MSSSVKDIKFIENRNSFCAVTADGEIKIFRVE 1019
>sp|A2QEV8|EIF3I_ASPNC Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=tif34 PE=3 SV=1
Length = 337
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 2433 TGSGSKPGDQNGMLWYIPKAHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHW 2492
+ +G + G NG H G++ + PNT + TGS D V+LW+ K + + W
Sbjct: 39 SANGERLGTYNG--------HQGAIWTVDVSPNTQILATGSADNTVRLWNVKTGECIKVW 90
>sp|A1CJY4|EIF3I_ASPCL Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=tif34 PE=3 SV=1
Length = 340
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 2452 AHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHW 2492
H G++ + PNT L TGS D V+LW+ K + V W
Sbjct: 50 GHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVW 90
>sp|P38538|SLAPH_BRECH Surface layer protein OS=Brevibacillus choshinensis PE=1 SV=1
Length = 1116
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 8/105 (7%)
Query: 2107 VFFNLEDEIPLHDQLKYIWADADWPQNGWAGSESTPVPTFVSPGVGLGSNKGAHLGLGGA 2166
+ N+ DE L LK D DW S+ P+ T V P +GLGS K + L G
Sbjct: 232 IRLNVTDETLLTKYLKVTVRDMDWAHEKGNNSDELPLVTNV-PAIGLGSLKANEVTLNGK 290
Query: 2167 TIGVGSLARPGRDLTGGLAFGIPGYAGIGASALGWETQDDFEDYV 2211
+GS + T +A GI A G W +DD E+ +
Sbjct: 291 DADLGS------NTTYKVAEGINPNAFDGQKVQVW-IKDDRENVI 328
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 93/245 (37%), Gaps = 48/245 (19%)
Query: 2274 ISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSV 2333
+++L F G ASA+ D T+ W++ G + +++ + DV++ +S G
Sbjct: 1242 VNSLSFSPDGKTLASASADKTIKLWRIADG-----KLVKTLKGHNDSVWDVNF-SSDGKA 1295
Query: 2334 IAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGGARSISVF--DNDLGSGS-------- 2383
IA+A + + +W+ + T H GG +++ N + S S
Sbjct: 1296 IASASRDNT---IKLWNRHGIELET---FTGHSGGVYAVNFLPDSNIIASASLDNTIRLW 1349
Query: 2384 ----VSPLIVTGGKGGDVGI---HDFRYIATGKTKKHKH--SDRGGSSINTCAHADAQTG 2434
+SPL V G G + HD IAT + + GS + T A G
Sbjct: 1350 QRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYG 1409
Query: 2435 SGSKP---------GDQNGMLWYIPKA--------HLGSVTRISTVPNTSLFLTGSKDGD 2477
P D+ +W + H V +++ P+ + S+D
Sbjct: 1410 ISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNT 1469
Query: 2478 VKLWD 2482
VKLW+
Sbjct: 1470 VKLWN 1474
>sp|Q99973|TEP1_HUMAN Telomerase protein component 1 OS=Homo sapiens GN=TEP1 PE=1 SV=2
Length = 2627
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 2451 KAHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLV 2489
K H GSVT + +P L +T SKD DVKLW+ + QL+
Sbjct: 2552 KIHSGSVTALHVLPE--LLVTASKDRDVKLWERPSMQLL 2588
>sp|A1D7I5|EIF3I_NEOFI Eukaryotic translation initiation factor 3 subunit I OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL
181) GN=tif34 PE=3 SV=1
Length = 340
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 2452 AHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHW 2492
H G++ + PNT L TGS D V+LW+ K + V W
Sbjct: 50 GHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVW 90
>sp|Q4WX90|EIF3I_ASPFU Eukaryotic translation initiation factor 3 subunit I OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=tif34 PE=3 SV=1
Length = 340
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 2452 AHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHW 2492
H G++ + PNT L TGS D V+LW+ K + V W
Sbjct: 50 GHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVW 90
>sp|B0XYC8|EIF3I_ASPFC Eukaryotic translation initiation factor 3 subunit I OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=tif34 PE=3 SV=1
Length = 340
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 2452 AHLGSVTRISTVPNTSLFLTGSKDGDVKLWDAKAAQLVYHW 2492
H G++ + PNT L TGS D V+LW+ K + V W
Sbjct: 50 GHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVW 90
>sp|P54311|GBB1_RAT Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
OS=Rattus norvegicus GN=Gnb1 PE=1 SV=4
Length = 340
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 2437 SKPGDQNGMLWYIPKA--------HLGSVTRISTVPNTSLFLTGSKDGDVKLWDAK 2484
+ GD LW I H G V +S P+T LF++G+ D KLWD +
Sbjct: 159 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
>sp|Q5R5W8|GBB1_PONAB Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
OS=Pongo abelii GN=GNB1 PE=2 SV=3
Length = 340
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 2437 SKPGDQNGMLWYIPKA--------HLGSVTRISTVPNTSLFLTGSKDGDVKLWDAK 2484
+ GD LW I H G V +S P+T LF++G+ D KLWD +
Sbjct: 159 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
>sp|P62874|GBB1_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
OS=Mus musculus GN=Gnb1 PE=1 SV=3
Length = 340
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 2437 SKPGDQNGMLWYIPKA--------HLGSVTRISTVPNTSLFLTGSKDGDVKLWDAK 2484
+ GD LW I H G V +S P+T LF++G+ D KLWD +
Sbjct: 159 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
>sp|P62873|GBB1_HUMAN Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
OS=Homo sapiens GN=GNB1 PE=1 SV=3
Length = 340
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 2437 SKPGDQNGMLWYIPKA--------HLGSVTRISTVPNTSLFLTGSKDGDVKLWDAK 2484
+ GD LW I H G V +S P+T LF++G+ D KLWD +
Sbjct: 159 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
>sp|P62872|GBB1_CANFA Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
OS=Canis familiaris GN=GNB1 PE=2 SV=3
Length = 340
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 2437 SKPGDQNGMLWYIPKA--------HLGSVTRISTVPNTSLFLTGSKDGDVKLWDAK 2484
+ GD LW I H G V +S P+T LF++G+ D KLWD +
Sbjct: 159 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
>sp|P62871|GBB1_BOVIN Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
OS=Bos taurus GN=GNB1 PE=1 SV=3
Length = 340
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 2437 SKPGDQNGMLWYIPKA--------HLGSVTRISTVPNTSLFLTGSKDGDVKLWDAK 2484
+ GD LW I H G V +S P+T LF++G+ D KLWD +
Sbjct: 159 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus musculus
GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 52/128 (40%), Gaps = 16/128 (12%)
Query: 2419 GGSSINTCAHADAQTGSGSKPGDQNGMLWYIPKAHL---GSVTRISTV-----PNTSLFL 2470
GGS + C + S D + LW L GSV S V P+ LF+
Sbjct: 96 GGSPVRVCCFSPDSAYLASGAADGSIALWNAQTYKLYRCGSVKDSSLVACAFSPDGGLFV 155
Query: 2471 TGSKDGDVKLWDAKAAQLVYHWSKLHERHTFLQPSSRGFGGVVRAGVTDIQVVSRGFLSC 2530
TGS GD+ +WD + L H K H+ L + F +G +Q S SC
Sbjct: 156 TGSSGGDLTVWDDRMRCL--HSEKAHD----LGITCCSFSSQPLSGGEGLQ--SYQLASC 207
Query: 2531 GGDGSVKL 2538
G D +KL
Sbjct: 208 GQDCEIKL 215
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 978,463,902
Number of Sequences: 539616
Number of extensions: 42470665
Number of successful extensions: 98588
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 97706
Number of HSP's gapped (non-prelim): 1013
length of query: 2548
length of database: 191,569,459
effective HSP length: 134
effective length of query: 2414
effective length of database: 119,260,915
effective search space: 287895848810
effective search space used: 287895848810
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 70 (31.6 bits)