Query 000060
Match_columns 2472
No_of_seqs 299 out of 1425
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 11:36:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000060.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000060hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vkg_A Dynein heavy chain, cyt 94.8 0.18 6.2E-06 73.7 15.3 159 551-709 1926-2087(3245)
2 3vkg_A Dynein heavy chain, cyt 94.7 0.26 9E-06 72.1 16.7 159 548-706 1905-2071(3245)
3 2dfs_A Myosin-5A; myosin-V, in 91.4 1.4 4.9E-05 59.3 14.8 20 154-173 241-260 (1080)
4 2zuo_A MVP, major vault protei 91.3 6.9 0.00024 51.5 20.1 16 340-355 382-399 (861)
5 2zuo_A MVP, major vault protei 90.9 8.9 0.00031 50.5 20.5 6 475-480 543-548 (861)
6 1i84_S Smooth muscle myosin he 90.4 0.34 1.2E-05 65.4 7.7 20 154-173 268-287 (1184)
7 2dfs_A Myosin-5A; myosin-V, in 89.5 7 0.00024 52.9 18.8 20 174-193 356-375 (1080)
8 1i84_S Smooth muscle myosin he 89.5 0.38 1.3E-05 64.9 7.2 21 173-193 381-401 (1184)
9 1f5n_A Interferon-induced guan 87.8 12 0.00042 47.7 18.5 7 56-62 42-48 (592)
10 4f61_I Stathmin-like domain R4 86.4 25 0.00084 40.9 17.9 8 549-556 45-52 (240)
11 1f5n_A Interferon-induced guan 82.7 13 0.00044 47.5 15.2 6 324-329 236-241 (592)
12 2b5u_A Colicin E3; high resolu 81.4 55 0.0019 41.3 19.1 14 538-551 278-291 (551)
13 2b5u_A Colicin E3; high resolu 80.4 43 0.0015 42.2 17.7 6 114-119 35-40 (551)
14 3iyk_A VP5; icosahedral virus; 59.2 2.1E+02 0.007 36.5 17.1 15 538-552 83-97 (526)
15 2pk2_A Cyclin-T1, protein TAT; 45.7 4.3 0.00015 48.5 0.0 14 42-55 291-304 (358)
16 3iox_A AGI/II, PA; alpha helix 34.4 8.4E+02 0.029 31.2 17.1 6 1063-1068 333-338 (497)
17 2vgp_C Inner centromere protei 22.5 5.5 0.00019 35.7 -3.2 33 767-808 1-35 (43)
18 2pk2_A Cyclin-T1, protein TAT; 21.5 20 0.00067 43.0 0.0 11 45-55 297-307 (358)
No 1
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=94.80 E-value=0.18 Score=73.72 Aligned_cols=159 Identities=13% Similarity=0.074 Sum_probs=0.0
Q ss_pred HhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000060 551 VKKKKDVLKQTDFHDPVRESFEAELERVQKMQEQERQRIIEEQERALELARREEEERLRVAREQEEQRRRLEEETREAVW 630 (2472)
Q Consensus 551 VKKKKEeaKq~E~EDklREEaEaELERrrEeeEEEReReEEEQEReEEEaRKEEEEReReaREEEERRRReEEEeRErer 630 (2472)
+.|-++...+.+...+...+.+.++++..++.++..++...+++..++++...++++++.++++++..+++++.+++-++
T Consensus 1926 L~KL~et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae~~k~~v~~~~~~~~~~~~ei~~~k~~~e~dL~~ 2005 (3245)
T 3vkg_A 1926 LKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADLEK 2005 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch---hhhhhccchhhhh
Q 000060 631 RAEQEQLEATRKAEEQRIAREEERQRIIMEEERRKHAAKQKLLELEERIAKRQAEAAKSDSNSS---DIADEKSSGLAKE 707 (2472)
Q Consensus 631 REEKERlEAERKEEEERKRrEEEErRREEEEERRREEEEQRRrEEEEReKKrQaEeEKrrkeAE---akakEKaeq~kkE 707 (2472)
.+-.+-++++-++.|++.++.+++.++++++-++-+++-++.+++-++..+++++.+...+..+ .++.........|
T Consensus 2006 A~Pa~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~E 2085 (3245)
T 3vkg_A 2006 AEPTGPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSE 2085 (3245)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q ss_pred cc
Q 000060 708 RD 709 (2472)
Q Consensus 708 RE 709 (2472)
++
T Consensus 2086 k~ 2087 (3245)
T 3vkg_A 2086 RG 2087 (3245)
T ss_dssp HH
T ss_pred cc
No 2
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=94.74 E-value=0.26 Score=72.11 Aligned_cols=159 Identities=16% Similarity=0.182 Sum_probs=0.0
Q ss_pred hhHHhhhhhhhcccccC-----CchhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000060 548 VGVVKKKKDVLKQTDFH-----DPVRESFE--AELERVQKMQEQERQRIIEEQERALELARREEEERLRVAREQEEQRRR 620 (2472)
Q Consensus 548 ialVKKKKEeaKq~E~E-----DklREEaE--aELERrrEeeEEEReReEEEQEReEEEaRKEEEEReReaREEEERRRR 620 (2472)
..++.+|+++......+ +|+++..+ .+++.+.+.++.+.+++.++.++..++..++.++.++++++.++.+++
T Consensus 1905 ~~ll~~K~~el~~~~~rl~~GL~KL~et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae~~k~~v~~~~~~ 1984 (3245)
T 3vkg_A 1905 VLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQ 1984 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhh
Q 000060 621 LEEETREAVWRAEQEQLE-ATRKAEEQRIAREEERQRIIMEEERRKHAAKQKLLELEERIAKRQAEAAKSDSNSSDIADE 699 (2472)
Q Consensus 621 eEEEeRErerREEKERlE-AERKEEEERKRrEEEErRREEEEERRREEEEQRRrEEEEReKKrQaEeEKrrkeAEakakE 699 (2472)
.++++++.++++++.+.+ ++.+=.+-++++-++.++..++.+++-++.+++..+.+++.++.+++-++..++++....+
T Consensus 1985 ~~~~~~ei~~~k~~~e~dL~~A~Pa~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e 2064 (3245)
T 3vkg_A 1985 LDVRNKEIAVQKVKAYADLEKAEPTGPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTE 2064 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred ccchhhh
Q 000060 700 KSSGLAK 706 (2472)
Q Consensus 700 Kaeq~kk 706 (2472)
......+
T Consensus 2065 ~~~~~~k 2071 (3245)
T 3vkg_A 2065 SSKVKNK 2071 (3245)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
No 3
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=91.37 E-value=1.4 Score=59.32 Aligned_cols=20 Identities=10% Similarity=0.082 Sum_probs=10.9
Q ss_pred cccCCCCccCCCCCCccCCC
Q 000060 154 VYVPPSVRSGTVGPALSSFA 173 (2472)
Q Consensus 154 ~~~~~s~~~~~~~~~~~~~~ 173 (2472)
.|+=--.||-...+.++.||
T Consensus 241 ~yLLEKsRVv~q~~~ERnfH 260 (1080)
T 2dfs_A 241 TYLLEKSRVVFQAEEERNYH 260 (1080)
T ss_dssp EECCCCGGGTCCCTTCCSBH
T ss_pred eEeecCceeeccCCCCCcch
Confidence 35555555555555566655
No 4
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=91.31 E-value=6.9 Score=51.51 Aligned_cols=16 Identities=38% Similarity=0.451 Sum_probs=9.6
Q ss_pred cccccCc--CCccccccc
Q 000060 340 VFERWGQ--RDSETGKVS 355 (2472)
Q Consensus 340 ~~~~~g~--r~~e~~k~~ 355 (2472)
|-+..|- ||..+|||.
T Consensus 382 LdenEgIYVrd~kTG~VR 399 (861)
T 2zuo_A 382 LDQNEGIYVQDVKTGKVR 399 (861)
T ss_dssp CCTTCEEEEEETTTCCEE
T ss_pred eCCCceEEEEEcCCccEE
Confidence 3344453 777788765
No 5
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=90.91 E-value=8.9 Score=50.54 Aligned_cols=6 Identities=33% Similarity=0.329 Sum_probs=3.3
Q ss_pred cccccC
Q 000060 475 YNRFRG 480 (2472)
Q Consensus 475 ygrYrG 480 (2472)
||||-.
T Consensus 543 YnW~F~ 548 (861)
T 2zuo_A 543 YNWHFE 548 (861)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 666543
No 6
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=90.39 E-value=0.34 Score=65.44 Aligned_cols=20 Identities=15% Similarity=0.165 Sum_probs=11.6
Q ss_pred cccCCCCccCCCCCCccCCC
Q 000060 154 VYVPPSVRSGTVGPALSSFA 173 (2472)
Q Consensus 154 ~~~~~s~~~~~~~~~~~~~~ 173 (2472)
.|+=--.||-...+.++.||
T Consensus 268 ~ylLEksRv~~q~~~Ernfh 287 (1184)
T 1i84_S 268 TYLLEKSRAIRQAKDERTFH 287 (1184)
T ss_dssp ECCCCCGGGSCCCTTCCCCT
T ss_pred EeecCCceeeeecCCCCchh
Confidence 45555555555556666666
No 7
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=89.54 E-value=7 Score=52.93 Aligned_cols=20 Identities=25% Similarity=0.298 Sum_probs=12.9
Q ss_pred ccccccccccCCCccccccc
Q 000060 174 PAEKASVLRGEDFPSLQAAL 193 (2472)
Q Consensus 174 ~~ek~~vlrgedfpsl~a~l 193 (2472)
.+++|+-|=|=|--.|..+|
T Consensus 356 ~l~~~a~LLgv~~~~L~~~l 375 (1080)
T 2dfs_A 356 PLTIFCDLMGVDYEEMAHWL 375 (1080)
T ss_dssp HHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHh
Confidence 56666666666666666665
No 8
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=89.52 E-value=0.38 Score=64.94 Aligned_cols=21 Identities=19% Similarity=0.332 Sum_probs=14.8
Q ss_pred CccccccccccCCCccccccc
Q 000060 173 APAEKASVLRGEDFPSLQAAL 193 (2472)
Q Consensus 173 ~~~ek~~vlrgedfpsl~a~l 193 (2472)
..+++|+-|=|=|.-.|..+|
T Consensus 381 ~~~~~~a~lLg~~~~~l~~~l 401 (1184)
T 1i84_S 381 TAAQKVCHLMGINVTDFTRSI 401 (1184)
T ss_dssp HHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHh
Confidence 456777777777776676666
No 9
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=87.81 E-value=12 Score=47.69 Aligned_cols=7 Identities=14% Similarity=0.168 Sum_probs=3.5
Q ss_pred EEeeccC
Q 000060 56 LVLSRPR 62 (2472)
Q Consensus 56 ~vlsr~r 62 (2472)
+|+++|+
T Consensus 42 aivG~pn 48 (592)
T 1f5n_A 42 AIVGLYR 48 (592)
T ss_dssp EEEEBTT
T ss_pred EEECCCC
Confidence 3555554
No 10
>4f61_I Stathmin-like domain R4; alpha-tubulin, beta-tubulin, GTPase, microtubule, RB3, stath tubulin, cell cycle; HET: GTP GDP; 4.17A {Artificial gene}
Probab=86.42 E-value=25 Score=40.86 Aligned_cols=8 Identities=25% Similarity=0.372 Sum_probs=3.2
Q ss_pred hHHhhhhh
Q 000060 549 GVVKKKKD 556 (2472)
Q Consensus 549 alVKKKKE 556 (2472)
..|.+|-+
T Consensus 45 eEIqkKLe 52 (240)
T 4f61_I 45 EEIQKKLE 52 (240)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33444433
No 11
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=82.70 E-value=13 Score=47.51 Aligned_cols=6 Identities=50% Similarity=0.960 Sum_probs=3.1
Q ss_pred CCCCCC
Q 000060 324 FDMPRP 329 (2472)
Q Consensus 324 fd~p~~ 329 (2472)
|-||+|
T Consensus 236 f~lp~P 241 (592)
T 1f5n_A 236 FVFDRP 241 (592)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 445555
No 12
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=81.38 E-value=55 Score=41.32 Aligned_cols=14 Identities=14% Similarity=0.359 Sum_probs=10.4
Q ss_pred CCCCCcccchhhHH
Q 000060 538 DGRDPFSAGLVGVV 551 (2472)
Q Consensus 538 dGrDP~t~smialV 551 (2472)
.|.+|++.+|...+
T Consensus 278 Sg~ePlYISvs~il 291 (551)
T 2b5u_A 278 SGHNAVYVSVSDVL 291 (551)
T ss_dssp GCCCCEEEEEEECC
T ss_pred CCCCceEEEEeecC
Confidence 69999987775543
No 13
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=80.37 E-value=43 Score=42.23 Aligned_cols=6 Identities=50% Similarity=1.714 Sum_probs=0.0
Q ss_pred CCCCCC
Q 000060 114 SGTGWT 119 (2472)
Q Consensus 114 sg~gwt 119 (2472)
.|.||+
T Consensus 35 ~gsGws 40 (551)
T 2b5u_A 35 DGSGWS 40 (551)
T ss_dssp ------
T ss_pred CCCCcc
Confidence 334443
No 14
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=59.20 E-value=2.1e+02 Score=36.48 Aligned_cols=15 Identities=33% Similarity=0.527 Sum_probs=9.0
Q ss_pred CCCCCcccchhhHHh
Q 000060 538 DGRDPFSAGLVGVVK 552 (2472)
Q Consensus 538 dGrDP~t~smialVK 552 (2472)
.-.||+...-.....
T Consensus 83 ~~pDPLsPgE~~~~~ 97 (526)
T 3iyk_A 83 EIPDPLSPGERGIQA 97 (526)
T ss_pred CCCCCCCHhHHHHHH
Confidence 467888666555433
No 15
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=45.73 E-value=4.3 Score=48.54 Aligned_cols=14 Identities=29% Similarity=0.629 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCce
Q 000060 42 SNRARPTGGGGGGM 55 (2472)
Q Consensus 42 ~~~~~~~~~~gggm 55 (2472)
+++|++||||+|||
T Consensus 291 ~~~~~~~~~~~~~~ 304 (358)
T 2pk2_A 291 GSGGGSGGGTSGGV 304 (358)
T ss_dssp --------------
T ss_pred CCCCCCCCCCCCCC
Confidence 34444444444444
No 16
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=34.41 E-value=8.4e+02 Score=31.20 Aligned_cols=6 Identities=33% Similarity=0.279 Sum_probs=2.7
Q ss_pred cccCcC
Q 000060 1063 IAPASS 1068 (2472)
Q Consensus 1063 ~~~~s~ 1068 (2472)
|+||||
T Consensus 333 InGSSV 338 (497)
T 3iox_A 333 ISGSSI 338 (497)
T ss_dssp BTTCSE
T ss_pred ecCCeE
Confidence 444443
No 17
>2vgp_C Inner centromere protein A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD6; 1.7A {Xenopus laevis} PDB: 2bfy_C* 2bfx_C* 2vrx_C* 2vgo_C* 3ztx_C*
Probab=22.47 E-value=5.5 Score=35.67 Aligned_cols=33 Identities=12% Similarity=0.320 Sum_probs=28.7
Q ss_pred cCcCcccccCCCC--ccccccccccCCCCCCCCCCCCCCCCCCC
Q 000060 767 FNSWRRDAFESGN--SSTFITQDAENGHYSPRRDSAFGGRAVPR 808 (2472)
Q Consensus 767 inSWrR~~fl~q~--sS~F~Pq~~EN~~~sPrrDs~fG~rsppr 808 (2472)
++.|+....+++. .++|.| |+.|..||...+++
T Consensus 1 IP~WA~~~~L~~~l~~Q~~~p---------~D~d~iFG~I~pp~ 35 (43)
T 2vgp_C 1 IPAWASGNLLTQAIRQQYYKP---------IDVDRMYGTIDSPK 35 (43)
T ss_dssp CCGGGSHHHHHHHHHHHHHSC---------CCHHHHTTTSCCCC
T ss_pred CCcccchHHHHHHHHHHHccC---------CCHHHHcCCCCCcC
Confidence 5789999999987 888877 89999999998875
No 18
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=21.51 E-value=20 Score=43.04 Aligned_cols=11 Identities=36% Similarity=0.447 Sum_probs=0.0
Q ss_pred CCCCCCCCCce
Q 000060 45 ARPTGGGGGGM 55 (2472)
Q Consensus 45 ~~~~~~~gggm 55 (2472)
||+|+||+||-
T Consensus 297 ~~~~~~~~~~~ 307 (358)
T 2pk2_A 297 GGGTSGGVPGQ 307 (358)
T ss_dssp -----------
T ss_pred CCCCCCCCCCc
Confidence 33344444443
Done!