Query 000063
Match_columns 2469
No_of_seqs 306 out of 1399
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 11:55:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vkg_A Dynein heavy chain, cyt 94.2 0.3 1E-05 71.5 15.5 159 551-709 1926-2087(3245)
2 3vkg_A Dynein heavy chain, cyt 93.5 0.64 2.2E-05 68.3 16.6 157 550-706 1908-2071(3245)
3 2zuo_A MVP, major vault protei 92.3 5.4 0.00019 52.4 20.7 16 340-355 382-399 (861)
4 2zuo_A MVP, major vault protei 90.2 11 0.00039 49.6 20.5 6 475-480 543-548 (861)
5 2dfs_A Myosin-5A; myosin-V, in 90.1 2 7E-05 57.9 14.5 20 154-173 241-260 (1080)
6 1i84_S Smooth muscle myosin he 89.5 0.47 1.6E-05 64.1 8.0 20 154-173 268-287 (1184)
7 1i84_S Smooth muscle myosin he 88.7 1.1 3.8E-05 60.6 10.7 21 173-193 381-401 (1184)
8 2dfs_A Myosin-5A; myosin-V, in 86.1 14 0.00048 50.1 18.5 20 174-193 356-375 (1080)
9 4f61_I Stathmin-like domain R4 84.5 35 0.0012 39.6 18.0 9 549-557 45-53 (240)
10 1f5n_A Interferon-induced guan 83.8 12 0.00042 47.7 15.6 7 56-62 42-48 (592)
11 2b5u_A Colicin E3; high resolu 80.8 85 0.0029 39.7 20.4 19 529-549 271-289 (551)
12 1f5n_A Interferon-induced guan 79.3 20 0.00069 45.8 15.2 6 324-329 236-241 (592)
13 2b5u_A Colicin E3; high resolu 75.2 78 0.0027 40.1 17.8 6 114-119 35-40 (551)
14 2pk2_A Cyclin-T1, protein TAT; 45.4 4.4 0.00015 48.4 0.0 14 42-55 291-304 (358)
15 3iox_A AGI/II, PA; alpha helix 28.9 6.5E+02 0.022 32.2 14.8 7 1063-1069 333-339 (497)
16 2vgp_C Inner centromere protei 22.0 5.6 0.00019 35.6 -3.3 33 767-808 1-35 (43)
17 2pk2_A Cyclin-T1, protein TAT; 21.3 20 0.00069 43.0 0.0 11 45-55 297-307 (358)
18 3iyk_A VP5; icosahedral virus; 21.0 1.4E+03 0.048 29.3 19.4 15 539-553 84-98 (526)
No 1
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=94.24 E-value=0.3 Score=71.47 Aligned_cols=159 Identities=13% Similarity=0.074 Sum_probs=0.0
Q ss_pred hhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000063 551 VKKKKDVLKQTDFHDPVRESFEAELERVQKMQEQERQRIIEEQERALELARREEEERLRVAREQEEQRRRLEEETREAVW 630 (2469)
Q Consensus 551 VRKKKEaaKqaE~EdK~REEeEAELERRqEeEEEERqReEEEQEREeEEeRKEEEEReReaREEEERRRReEEEEREeEe 630 (2469)
+.|=+++..+.+.-++..++.+.+++++.++.++..++...+++..++++...++++++.++++++..+++++.+++-++
T Consensus 1926 L~KL~et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae~~k~~v~~~~~~~~~~~~ei~~~k~~~e~dL~~ 2005 (3245)
T 3vkg_A 1926 LKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADLEK 2005 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch---hhhhhcccchhhh
Q 000063 631 RAEQEQLEATRKAEEQRIAREEERQRIIMEEERRKHAAKQKLLELEERIAKRQAEAAKSDSNSS---DIADEKSSGLAKE 707 (2469)
Q Consensus 631 eEEKEReEAeRKEEEERrRREEEErRREEEEERRREEEEERRrEEEERqKKeQaEeEKrRrqAE---akAkEKaek~reE 707 (2469)
.+-.+-++++.++.+++.++.+++.++.+++-++-+++-++.+++-++..+++++.+.+....+ .++..-......|
T Consensus 2006 A~Pa~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~E 2085 (3245)
T 3vkg_A 2006 AEPTGPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSE 2085 (3245)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q ss_pred cc
Q 000063 708 RD 709 (2469)
Q Consensus 708 KE 709 (2469)
+.
T Consensus 2086 k~ 2087 (3245)
T 3vkg_A 2086 RG 2087 (3245)
T ss_dssp HH
T ss_pred cc
No 2
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=93.54 E-value=0.64 Score=68.30 Aligned_cols=157 Identities=13% Similarity=0.130 Sum_probs=0.0
Q ss_pred hhhhhhhhhcccccC----CchhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000063 550 VVKKKKDVLKQTDFH----DPVRESFE--AELERVQKMQEQERQRIIEEQERALELARREEEERLRVAREQEEQRRRLEE 623 (2469)
Q Consensus 550 lVRKKKEaaKqaE~E----dK~REEeE--AELERRqEeEEEERqReEEEQEREeEEeRKEEEEReReaREEEERRRReEE 623 (2469)
+.+|+++...+.++- +|+++..+ ++++++.+..+.+.+++.++.++..++-.++.+++++++++.++.+++.++
T Consensus 1908 l~~K~~el~~~~~rl~~GL~KL~et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae~~k~~v~~~~~~~~~ 1987 (3245)
T 3vkg_A 1908 INEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDV 1987 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhccc
Q 000063 624 ETREAVWRAEQEQLEATRKAEEQ-RIAREEERQRIIMEEERRKHAAKQKLLELEERIAKRQAEAAKSDSNSSDIADEKSS 702 (2469)
Q Consensus 624 EEREeEeeEEKEReEAeRKEEEE-RrRREEEErRREEEEERRREEEEERRrEEEERqKKeQaEeEKrRrqAEakAkEKae 702 (2469)
++++.++++++..++-++.+=.+ ++++-++.++..++.+++.++.+++..+.+++.++.+++-++..++.++.+.+...
T Consensus 1988 ~~~ei~~~k~~~e~dL~~A~Pa~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~ 2067 (3245)
T 3vkg_A 1988 RNKEIAVQKVKAYADLEKAEPTGPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSK 2067 (3245)
T ss_dssp HHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred chhh
Q 000063 703 GLAK 706 (2469)
Q Consensus 703 k~re 706 (2469)
...+
T Consensus 2068 ~~~k 2071 (3245)
T 3vkg_A 2068 VKNK 2071 (3245)
T ss_dssp HHHH
T ss_pred HHHH
No 3
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=92.32 E-value=5.4 Score=52.43 Aligned_cols=16 Identities=38% Similarity=0.451 Sum_probs=9.7
Q ss_pred cccccCc--CCccccccc
Q 000063 340 VFERWGQ--RDSETGKVS 355 (2469)
Q Consensus 340 ~~~~~g~--r~~e~~k~~ 355 (2469)
|-+..|- ||..+|||.
T Consensus 382 LdenEgIYVrd~kTG~VR 399 (861)
T 2zuo_A 382 LDQNEGIYVQDVKTGKVR 399 (861)
T ss_dssp CCTTCEEEEEETTTCCEE
T ss_pred eCCCceEEEEEcCCccEE
Confidence 3344453 777788865
No 4
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=90.20 E-value=11 Score=49.63 Aligned_cols=6 Identities=33% Similarity=0.329 Sum_probs=3.6
Q ss_pred cccccC
Q 000063 475 YNRFRG 480 (2469)
Q Consensus 475 ygry~G 480 (2469)
||||-.
T Consensus 543 YnW~F~ 548 (861)
T 2zuo_A 543 YNWHFE 548 (861)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 677543
No 5
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=90.11 E-value=2 Score=57.89 Aligned_cols=20 Identities=10% Similarity=0.082 Sum_probs=10.9
Q ss_pred cccCCCCccCCCCCCccCCC
Q 000063 154 VYVPPSVRSGTVGPALSSFA 173 (2469)
Q Consensus 154 ~~~~~s~~~~~~~~~~~~~~ 173 (2469)
.|+=--.||-...+.++.||
T Consensus 241 ~yLLEKsRVv~q~~~ERnfH 260 (1080)
T 2dfs_A 241 TYLLEKSRVVFQAEEERNYH 260 (1080)
T ss_dssp EECCCCGGGTCCCTTCCSBH
T ss_pred eEeecCceeeccCCCCCcch
Confidence 35555555555555566655
No 6
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=89.52 E-value=0.47 Score=64.06 Aligned_cols=20 Identities=15% Similarity=0.165 Sum_probs=11.5
Q ss_pred cccCCCCccCCCCCCccCCC
Q 000063 154 VYVPPSVRSGTVGPALSSFA 173 (2469)
Q Consensus 154 ~~~~~s~~~~~~~~~~~~~~ 173 (2469)
.|+=--.||-...+.++.||
T Consensus 268 ~ylLEksRv~~q~~~Ernfh 287 (1184)
T 1i84_S 268 TYLLEKSRAIRQAKDERTFH 287 (1184)
T ss_dssp ECCCCCGGGSCCCTTCCCCT
T ss_pred EeecCCceeeeecCCCCchh
Confidence 45555555555555666666
No 7
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=88.75 E-value=1.1 Score=60.57 Aligned_cols=21 Identities=19% Similarity=0.332 Sum_probs=14.8
Q ss_pred CccccccccccCCCccccccc
Q 000063 173 APAEKASVLRGEDFPSLQAAL 193 (2469)
Q Consensus 173 ~~~ek~~vlrgedfpsl~a~l 193 (2469)
..+++|+-|=|=|.-.|..+|
T Consensus 381 ~~~~~~a~lLg~~~~~l~~~l 401 (1184)
T 1i84_S 381 TAAQKVCHLMGINVTDFTRSI 401 (1184)
T ss_dssp HHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHh
Confidence 456777777777776676666
No 8
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=86.12 E-value=14 Score=50.14 Aligned_cols=20 Identities=25% Similarity=0.298 Sum_probs=12.9
Q ss_pred ccccccccccCCCccccccc
Q 000063 174 PAEKASVLRGEDFPSLQAAL 193 (2469)
Q Consensus 174 ~~ek~~vlrgedfpsl~a~l 193 (2469)
.+++|+-|=|=|--.|..+|
T Consensus 356 ~l~~~a~LLgv~~~~L~~~l 375 (1080)
T 2dfs_A 356 PLTIFCDLMGVDYEEMAHWL 375 (1080)
T ss_dssp HHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHh
Confidence 56666666666666666665
No 9
>4f61_I Stathmin-like domain R4; alpha-tubulin, beta-tubulin, GTPase, microtubule, RB3, stath tubulin, cell cycle; HET: GTP GDP; 4.17A {Artificial gene}
Probab=84.49 E-value=35 Score=39.59 Aligned_cols=9 Identities=22% Similarity=0.335 Sum_probs=3.8
Q ss_pred hhhhhhhhh
Q 000063 549 GVVKKKKDV 557 (2469)
Q Consensus 549 alVRKKKEa 557 (2469)
..|++|-++
T Consensus 45 eEIqkKLeA 53 (240)
T 4f61_I 45 EEIQKKLEA 53 (240)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344444443
No 10
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=83.79 E-value=12 Score=47.68 Aligned_cols=7 Identities=14% Similarity=0.168 Sum_probs=3.5
Q ss_pred EEeeccC
Q 000063 56 LVLSRPR 62 (2469)
Q Consensus 56 ~vlsr~r 62 (2469)
+|+++|+
T Consensus 42 aivG~pn 48 (592)
T 1f5n_A 42 AIVGLYR 48 (592)
T ss_dssp EEEEBTT
T ss_pred EEECCCC
Confidence 3555554
No 11
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=80.77 E-value=85 Score=39.71 Aligned_cols=19 Identities=11% Similarity=0.177 Sum_probs=11.8
Q ss_pred ccccCCCCCCCCCCcccchhh
Q 000063 529 MKDFGSSSFDGRDPFSAGLVG 549 (2469)
Q Consensus 529 ~dDfGaSgfdGrDP~t~~m~a 549 (2469)
+=+|+. .-|.+|++++|.-
T Consensus 271 II~FPe--~Sg~ePlYISvs~ 289 (551)
T 2b5u_A 271 VIRFPK--DSGHNAVYVSVSD 289 (551)
T ss_dssp EEECCG--GGCCCCEEEEEEE
T ss_pred EEECCC--CCCCCceEEEEee
Confidence 334554 2488999777654
No 12
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=79.28 E-value=20 Score=45.81 Aligned_cols=6 Identities=50% Similarity=0.960 Sum_probs=3.0
Q ss_pred CCCCCC
Q 000063 324 FDMPRP 329 (2469)
Q Consensus 324 fd~p~~ 329 (2469)
|-||+|
T Consensus 236 f~lp~P 241 (592)
T 1f5n_A 236 FVFDRP 241 (592)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 445555
No 13
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=75.15 E-value=78 Score=40.06 Aligned_cols=6 Identities=50% Similarity=1.714 Sum_probs=0.0
Q ss_pred CCCCCC
Q 000063 114 SGTGWT 119 (2469)
Q Consensus 114 sg~gwt 119 (2469)
.|.||+
T Consensus 35 ~gsGws 40 (551)
T 2b5u_A 35 DGSGWS 40 (551)
T ss_dssp ------
T ss_pred CCCCcc
Confidence 334443
No 14
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=45.37 E-value=4.4 Score=48.45 Aligned_cols=14 Identities=29% Similarity=0.629 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCce
Q 000063 42 SNRARPTGGGGGGM 55 (2469)
Q Consensus 42 ~~~~~~~~~~gggm 55 (2469)
+++|++||||+|||
T Consensus 291 ~~~~~~~~~~~~~~ 304 (358)
T 2pk2_A 291 GSGGGSGGGTSGGV 304 (358)
T ss_dssp --------------
T ss_pred CCCCCCCCCCCCCC
Confidence 34444444444444
No 15
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=28.88 E-value=6.5e+02 Score=32.15 Aligned_cols=7 Identities=29% Similarity=0.026 Sum_probs=3.1
Q ss_pred cccCcCC
Q 000063 1063 IAPASSI 1069 (2469)
Q Consensus 1063 ~~~~s~v 1069 (2469)
|+||||.
T Consensus 333 InGSSV~ 339 (497)
T 3iox_A 333 ISGSSIG 339 (497)
T ss_dssp BTTCSEE
T ss_pred ecCCeEE
Confidence 4444433
No 16
>2vgp_C Inner centromere protein A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD6; 1.7A {Xenopus laevis} PDB: 2bfy_C* 2bfx_C* 2vrx_C* 2vgo_C* 3ztx_C*
Probab=21.96 E-value=5.6 Score=35.60 Aligned_cols=33 Identities=12% Similarity=0.320 Sum_probs=28.6
Q ss_pred CCccccccccCCC--ccccccccccCCCCCCCCCCCCCCCCCCC
Q 000063 767 FNSWRRDAFESGN--SSTFITQDAENGHYSPRRDSAFGGRAVPR 808 (2469)
Q Consensus 767 i~SWaR~~flrq~--sS~F~Pqd~EN~~~sPrrDs~fg~rsfpr 808 (2469)
++.||+...|++. .++|.| |+.|..||....++
T Consensus 1 IP~WA~~~~L~~~l~~Q~~~p---------~D~d~iFG~I~pp~ 35 (43)
T 2vgp_C 1 IPAWASGNLLTQAIRQQYYKP---------IDVDRMYGTIDSPK 35 (43)
T ss_dssp CCGGGSHHHHHHHHHHHHHSC---------CCHHHHTTTSCCCC
T ss_pred CCcccchHHHHHHHHHHHccC---------CCHHHHcCCCCCcC
Confidence 5789999999997 888887 89999999988765
No 17
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=21.25 E-value=20 Score=42.95 Aligned_cols=11 Identities=36% Similarity=0.447 Sum_probs=0.0
Q ss_pred CCCCCCCCCce
Q 000063 45 ARPTGGGGGGM 55 (2469)
Q Consensus 45 ~~~~~~~gggm 55 (2469)
||+|+||+||-
T Consensus 297 ~~~~~~~~~~~ 307 (358)
T 2pk2_A 297 GGGTSGGVPGQ 307 (358)
T ss_dssp -----------
T ss_pred CCCCCCCCCCc
Confidence 33344444443
No 18
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=21.00 E-value=1.4e+03 Score=29.31 Aligned_cols=15 Identities=40% Similarity=0.539 Sum_probs=8.9
Q ss_pred CCCCcccchhhhhhh
Q 000063 539 GRDPFSAGLVGVVKK 553 (2469)
Q Consensus 539 GrDP~t~~m~alVRK 553 (2469)
-.||+.++-.....|
T Consensus 84 ~pDPLsPgE~~~~~K 98 (526)
T 3iyk_A 84 IPDPLSPGERGIQAK 98 (526)
T ss_pred CCCCCCHhHHHHHHH
Confidence 577886665554333
Done!