Query 000065
Match_columns 2462
No_of_seqs 498 out of 2173
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 12:08:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000065.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000065hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2och_A Hypothetical protein DN 99.3 1.6E-12 5.6E-17 125.6 5.6 65 1503-1609 8-72 (73)
2 2dn9_A DNAJ homolog subfamily 99.3 4.3E-12 1.5E-16 124.3 6.2 70 1499-1610 3-75 (79)
3 1iur_A KIAA0730 protein; DNAJ 99.2 8E-12 2.7E-16 125.2 7.3 62 1497-1583 10-75 (88)
4 2ctp_A DNAJ homolog subfamily 99.2 4.6E-12 1.6E-16 123.8 5.2 70 1499-1610 3-74 (78)
5 2o37_A Protein SIS1; HSP40, J- 99.2 6.1E-12 2.1E-16 126.9 5.9 68 1501-1610 6-73 (92)
6 2ctr_A DNAJ homolog subfamily 99.2 9.2E-12 3.1E-16 124.6 6.2 70 1499-1610 3-74 (88)
7 2ej7_A HCG3 gene; HCG3 protein 99.2 8.3E-12 2.8E-16 123.1 5.6 68 1501-1610 7-78 (82)
8 2cug_A Mkiaa0962 protein; DNAJ 99.2 1.1E-11 3.8E-16 124.0 6.0 68 1501-1610 15-84 (88)
9 1hdj_A Human HSP40, HDJ-1; mol 99.2 9.6E-12 3.3E-16 121.3 4.8 65 1504-1610 4-70 (77)
10 2ctw_A DNAJ homolog subfamily 99.2 1.8E-11 6.2E-16 127.2 6.1 70 1498-1609 12-84 (109)
11 2yua_A Williams-beuren syndrom 99.2 2.5E-11 8.6E-16 124.1 6.3 60 1498-1582 12-74 (99)
12 2dmx_A DNAJ homolog subfamily 99.1 2.4E-11 8E-16 122.5 5.7 69 1501-1611 7-79 (92)
13 2ys8_A RAB-related GTP-binding 99.1 4.2E-11 1.4E-15 120.4 7.3 59 1502-1585 26-86 (90)
14 2ctq_A DNAJ homolog subfamily 99.1 1.5E-11 5E-16 128.5 3.9 70 1501-1612 18-90 (112)
15 2lgw_A DNAJ homolog subfamily 99.1 2E-11 6.8E-16 124.9 4.5 65 1504-1610 3-71 (99)
16 1faf_A Large T antigen; J doma 99.1 4.6E-11 1.6E-15 117.4 6.2 58 1501-1582 9-66 (79)
17 1gh6_A Large T antigen; tumor 99.1 2.4E-11 8.2E-16 127.2 4.3 55 1502-1582 7-63 (114)
18 1wjz_A 1700030A21RIK protein; 99.1 2.3E-11 7.7E-16 122.9 3.7 68 1500-1609 13-89 (94)
19 2guz_A Mitochondrial import in 99.1 9.6E-11 3.3E-15 112.8 7.0 60 1498-1582 9-68 (71)
20 1bq0_A DNAJ, HSP40; chaperone, 99.0 2.8E-11 9.7E-16 124.5 1.1 66 1504-1611 4-72 (103)
21 2qwo_B Putative tyrosine-prote 99.0 4.5E-11 1.6E-15 120.4 1.6 43 1538-1580 43-91 (92)
22 2qsa_A DNAJ homolog DNJ-2; J-d 99.0 7.7E-11 2.6E-15 122.4 3.4 67 1502-1610 14-87 (109)
23 2pf4_E Small T antigen; PP2A, 99.0 5.5E-11 1.9E-15 132.4 2.0 67 1502-1609 10-76 (174)
24 3apq_A DNAJ homolog subfamily 99.0 2E-10 7E-15 130.9 5.1 66 1504-1611 3-71 (210)
25 3lz8_A Putative chaperone DNAJ 99.0 7.3E-11 2.5E-15 144.1 0.0 60 1498-1582 23-84 (329)
26 2l6l_A DNAJ homolog subfamily 98.9 5E-10 1.7E-14 123.2 5.0 59 1500-1583 7-74 (155)
27 3ag7_A Putative uncharacterize 98.9 2.5E-10 8.5E-15 118.1 1.1 44 1539-1582 51-104 (106)
28 1n4c_A Auxilin; four helix bun 98.8 7.6E-10 2.6E-14 124.0 1.6 58 1503-1585 117-180 (182)
29 1fpo_A HSC20, chaperone protei 98.8 3.7E-09 1.3E-13 118.1 5.5 56 1504-1582 2-65 (171)
30 3bvo_A CO-chaperone protein HS 98.8 3.8E-09 1.3E-13 121.3 5.5 57 1503-1582 43-107 (207)
31 3hho_A CO-chaperone protein HS 98.7 6.7E-09 2.3E-13 116.4 4.2 56 1504-1582 5-68 (174)
32 3uo3_A J-type CO-chaperone JAC 98.7 4E-09 1.4E-13 118.8 1.2 45 1538-1582 28-72 (181)
33 3apo_A DNAJ homolog subfamily 98.5 1.7E-08 5.7E-13 136.2 0.4 69 1501-1611 19-90 (780)
34 1jdh_A Beta-catenin; beta-cate 98.4 0.0002 6.7E-09 91.0 35.7 482 1698-2445 33-528 (529)
35 2z6g_A B-catenin; FULL-length, 98.4 0.00019 6.5E-09 97.3 35.0 509 1667-2448 148-664 (780)
36 2z6h_A Catenin beta-1, beta-ca 98.3 0.00042 1.4E-08 91.5 35.9 502 1667-2448 12-528 (644)
37 2guz_B Mitochondrial import in 98.2 1.2E-06 4.1E-11 83.1 6.1 58 1500-1580 1-58 (65)
38 2jdq_A Importin alpha-1 subuni 98.2 8.6E-05 2.9E-09 92.2 23.3 303 2026-2448 37-348 (450)
39 3tpo_A Importin subunit alpha- 98.2 0.0023 8E-08 82.6 37.2 135 2026-2168 310-448 (529)
40 4hxt_A De novo protein OR329; 98.1 0.00011 3.6E-09 83.9 19.8 235 2052-2449 3-243 (252)
41 1wa5_B Importin alpha subunit; 98.1 0.00032 1.1E-08 90.1 26.5 302 2026-2449 104-414 (530)
42 4b8j_A Importin subunit alpha- 98.0 0.00036 1.2E-08 89.4 25.8 305 2026-2449 91-402 (528)
43 3ul1_B Importin subunit alpha- 98.0 0.0034 1.2E-07 80.8 34.6 136 2026-2169 291-430 (510)
44 2z6h_A Catenin beta-1, beta-ca 98.0 0.008 2.7E-07 79.4 37.4 346 1643-2170 114-487 (644)
45 3now_A UNC-45 protein, SD10334 97.9 0.0016 5.3E-08 88.3 28.6 135 2028-2169 600-737 (810)
46 4b8j_A Importin subunit alpha- 97.8 0.00072 2.4E-08 86.7 22.8 304 2026-2449 135-445 (528)
47 1jdh_A Beta-catenin; beta-cate 97.8 0.002 6.7E-08 81.9 25.4 337 2026-2448 34-386 (529)
48 4db8_A Armadillo-repeat protei 97.8 0.0007 2.4E-08 77.8 19.3 233 2052-2447 13-251 (252)
49 2z6g_A B-catenin; FULL-length, 97.7 0.014 4.8E-07 79.2 33.0 356 1643-2183 250-632 (780)
50 2jdq_A Importin alpha-1 subuni 97.6 0.0018 6.2E-08 80.3 21.3 301 2027-2449 83-392 (450)
51 3tpo_A Importin subunit alpha- 97.6 0.013 4.6E-07 75.6 29.6 137 2026-2170 268-407 (529)
52 1wa5_B Importin alpha subunit; 97.6 0.0025 8.7E-08 81.8 22.5 303 2026-2449 148-459 (530)
53 3ul1_B Importin subunit alpha- 97.5 0.011 3.9E-07 76.0 27.3 137 2026-2170 249-388 (510)
54 1xm9_A Plakophilin 1; armadill 97.5 0.0043 1.5E-07 78.9 22.8 349 2026-2449 19-408 (457)
55 1xm9_A Plakophilin 1; armadill 97.5 0.0079 2.7E-07 76.5 24.6 138 2026-2171 301-451 (457)
56 3now_A UNC-45 protein, SD10334 97.4 0.0068 2.3E-07 82.2 23.0 338 2026-2449 396-784 (810)
57 3nmz_A APC variant protein; pr 97.3 0.055 1.9E-06 69.2 28.6 311 2026-2449 99-452 (458)
58 3l6x_A Catenin delta-1; cateni 97.2 0.012 4E-07 77.4 22.3 329 2026-2448 65-477 (584)
59 4db6_A Armadillo repeat protei 97.2 0.0065 2.2E-07 67.8 17.3 177 2026-2232 29-208 (210)
60 2y4t_A DNAJ homolog subfamily 97.1 0.00021 7.2E-09 87.7 4.6 46 1539-1584 393-444 (450)
61 3nmz_A APC variant protein; pr 97.1 0.11 3.9E-06 66.4 29.2 137 2029-2170 307-451 (458)
62 4db8_A Armadillo-repeat protei 97.0 0.0045 1.5E-07 71.0 13.8 137 2026-2170 29-168 (252)
63 4hxt_A De novo protein OR329; 97.0 0.0079 2.7E-07 68.3 14.9 137 2026-2170 19-158 (252)
64 4db6_A Armadillo repeat protei 96.9 0.0055 1.9E-07 68.4 12.9 136 2026-2169 71-209 (210)
65 3l6x_A Catenin delta-1; cateni 96.9 0.076 2.6E-06 69.8 24.7 138 2026-2170 326-477 (584)
66 3nmw_A APC variant protein; AR 96.8 0.24 8.2E-06 61.3 27.7 147 2027-2180 189-343 (354)
67 3nmw_A APC variant protein; AR 96.8 0.25 8.5E-06 61.2 27.6 262 2072-2448 50-335 (354)
68 1wh2_A Hypothetical protein AT 96.8 0.0011 3.8E-08 65.1 5.2 55 1169-1224 15-69 (78)
69 1xqr_A HSPBP1 protein; armadil 96.4 0.022 7.5E-07 68.9 13.9 136 2026-2170 57-197 (296)
70 1xqr_A HSPBP1 protein; armadil 95.4 0.05 1.7E-06 65.8 11.0 148 2026-2183 99-249 (296)
71 3tt9_A Plakophilin-2; cell adh 93.3 0.36 1.2E-05 56.5 11.6 149 2027-2183 28-191 (233)
72 3k3v_A Protein SMY2; GYF domai 92.2 0.1 3.5E-06 53.5 4.2 51 1171-1221 15-73 (100)
73 3opb_A SWI5-dependent HO expre 87.0 32 0.0011 46.8 22.8 297 2027-2449 230-532 (778)
74 4fdd_A Transportin-1; heat rep 86.4 4.2 0.00014 55.3 14.5 160 2027-2197 146-312 (852)
75 3tt9_A Plakophilin-2; cell adh 86.1 2.4 8.3E-05 49.6 10.3 112 2052-2170 9-125 (233)
76 3grl_A General vesicular trans 85.9 8.2 0.00028 51.2 15.9 198 501-725 141-354 (651)
77 1ibr_B P95, importin beta-1 su 85.8 11 0.00037 46.5 16.6 281 2068-2448 144-438 (462)
78 4gmo_A Putative uncharacterize 83.8 45 0.0016 44.6 22.3 80 2095-2181 34-115 (684)
79 3opb_A SWI5-dependent HO expre 82.7 2.2 7.5E-05 57.7 8.9 140 2026-2171 474-637 (778)
80 1w63_A Adapter-related protein 75.8 63 0.0021 42.6 19.4 140 2027-2194 88-229 (618)
81 2qk2_A LP04448P; mini spindles 75.0 14 0.00048 42.3 11.5 169 2027-2235 33-207 (242)
82 1mix_A Talin; focal adhesion, 70.4 6.9 0.00024 44.2 7.3 81 24-115 117-200 (206)
83 1b3u_A Protein (protein phosph 66.2 28 0.00097 44.2 12.6 129 2027-2170 182-311 (588)
84 3grl_A General vesicular trans 64.3 57 0.0019 43.5 14.8 158 2026-2188 229-411 (651)
85 4f7g_A Talin-1; alpha-helix bu 61.5 16 0.00054 42.0 8.1 80 24-114 128-210 (222)
86 4gmo_A Putative uncharacterize 60.1 11 0.00037 50.5 7.4 137 2027-2170 52-215 (684)
87 3oc3_A Helicase MOT1, MOT1; re 57.6 14 0.00048 48.1 7.1 133 522-707 297-430 (800)
88 4fdd_A Transportin-1; heat rep 52.7 2.1E+02 0.0072 38.8 18.1 76 2136-2234 45-120 (852)
89 1b3u_A Protein (protein phosph 50.9 99 0.0034 39.2 13.7 54 2388-2448 256-311 (588)
90 2bpt_A Importin beta-1 subunit 49.9 3.7E+02 0.013 35.9 19.7 129 2027-2169 242-398 (861)
91 2qk2_A LP04448P; mini spindles 47.8 2.5E+02 0.0084 31.8 15.1 136 498-670 73-210 (242)
92 1qgr_A Protein (importin beta 45.2 5.9E+02 0.02 34.0 20.5 272 2067-2447 143-437 (876)
93 3f0w_A NUMB-R, NUMB-like prote 44.7 42 0.0014 37.2 7.7 75 137-219 76-153 (168)
94 1j0w_A Downstream of tyrosine 43.9 50 0.0017 34.2 7.4 70 139-222 21-95 (103)
95 3d8d_A Amyloid beta A4 precurs 43.6 86 0.0029 34.4 9.5 83 134-222 47-134 (148)
96 3hie_A Protein PSL1, exocyst c 42.6 51 0.0017 37.0 7.8 76 33-116 62-147 (171)
97 2cy5_A Epidermal growth factor 42.6 62 0.0021 35.3 8.2 80 133-218 42-126 (140)
98 1syx_B CD2BP2, CD2 antigen cyt 42.5 21 0.00071 35.9 4.2 51 1171-1221 25-80 (86)
99 1wgu_A APBB2, amyloid beta (A4 41.2 89 0.003 33.8 9.2 75 135-219 50-127 (136)
100 2f31_A Diaphanous protein homo 40.6 1.6E+02 0.0055 34.1 12.1 126 498-636 70-196 (233)
101 3so6_A LDL receptor adaptor pr 39.5 88 0.003 33.0 9.0 65 136-208 41-107 (137)
102 3eg5_B Protein diaphanous homo 39.5 3.8E+02 0.013 33.4 16.0 133 500-645 138-273 (383)
103 3ivf_A Talin-1; FERM domain, c 37.5 30 0.001 42.8 5.7 81 23-114 281-364 (371)
104 3dxe_A Amyloid beta A4 protein 35.4 66 0.0023 35.0 7.1 76 135-220 42-119 (140)
105 4dbb_A Amyloid beta A4 precurs 34.9 53 0.0018 36.3 6.5 71 136-219 50-126 (162)
106 1p5t_A DOK1, docking protein 1 34.5 63 0.0022 34.6 6.6 70 140-223 26-103 (127)
107 2ysz_A Amyloid beta A4 precurs 34.4 93 0.0032 35.3 8.4 75 135-219 50-127 (185)
108 2yt0_A Amyloid beta A4 protein 34.4 89 0.003 35.3 8.1 92 104-219 78-173 (176)
109 2v76_A Docking protein 1; alte 33.7 64 0.0022 33.6 6.4 70 140-223 24-101 (107)
110 2dlw_A Docking protein 2, isof 33.5 52 0.0018 34.6 5.7 69 140-222 29-102 (113)
111 4ffb_C Protein STU2; tubulin f 32.6 1.2E+02 0.0042 35.3 9.6 133 2028-2176 28-173 (278)
112 2qk1_A Protein STU2; STU2P, XM 32.1 1.8E+02 0.0061 33.9 10.7 166 2029-2235 36-222 (249)
113 3eg5_B Protein diaphanous homo 31.0 54 0.0019 41.0 6.4 90 1662-1755 103-192 (383)
114 1h4r_A Merlin; FERM, neurofibr 30.9 70 0.0024 38.5 7.2 69 24-104 221-290 (314)
115 3dad_A FH1/FH2 domain-containi 30.7 4.1E+02 0.014 32.8 13.7 176 2026-2214 135-323 (339)
116 3u0r_A Apoptosis inhibitor 5; 30.6 1.2E+02 0.0042 39.0 9.4 96 2103-2230 54-160 (507)
117 2dyq_A Amyloid beta A4 precurs 30.1 90 0.0031 34.1 7.1 77 135-221 50-133 (144)
118 4ffb_C Protein STU2; tubulin f 30.0 3.6E+02 0.012 31.3 13.0 138 497-667 70-213 (278)
119 3qij_A Protein 4.1; cytoskelet 28.9 41 0.0014 40.4 4.8 70 24-104 207-277 (296)
120 2bpt_A Importin beta-1 subunit 28.6 9.3E+02 0.032 32.0 18.3 57 2388-2448 383-441 (861)
121 2bnx_A Diaphanous protein homo 28.3 2.2E+02 0.0074 35.6 11.2 136 498-645 74-211 (386)
122 3ltj_A Alpharep-4; protein eng 27.0 4.8E+02 0.016 28.2 12.6 15 2153-2167 89-103 (201)
123 2of3_A ZYG-9; multifunctional 27.0 1.2E+02 0.0041 36.2 8.1 110 2066-2193 144-257 (266)
124 2f31_A Diaphanous protein homo 26.5 72 0.0025 37.0 6.0 91 1662-1756 37-127 (233)
125 3au4_A Myosin-X; protein-prote 25.2 46 0.0016 43.5 4.5 66 37-115 467-532 (555)
126 3peg_A Neurofibromin; SEC14 do 25.1 35 0.0012 41.2 3.1 79 27-116 196-281 (290)
127 3ltm_A Alpha-REP4; protein eng 24.9 5.5E+02 0.019 27.9 12.7 142 2053-2231 21-170 (211)
128 1xr0_B FGFR signalling adaptor 23.8 1.6E+02 0.0054 31.7 7.3 76 138-230 26-105 (129)
129 2ej8_A DCC-interacting protein 23.3 96 0.0033 34.1 6.0 75 137-219 55-136 (160)
130 3a58_A Exocyst complex compone 22.7 1.3E+02 0.0043 36.5 6.9 91 18-116 105-217 (320)
131 3pg7_A Neurofibromin; SEC lipi 22.2 42 0.0014 39.8 3.0 50 57-116 198-247 (256)
132 3ltj_A Alpharep-4; protein eng 21.3 2.9E+02 0.01 29.9 9.5 26 2138-2167 140-165 (201)
133 2pzi_A Probable serine/threoni 21.1 70 0.0024 42.5 5.1 30 1543-1577 646-675 (681)
No 1
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.29 E-value=1.6e-12 Score=125.55 Aligned_cols=65 Identities=35% Similarity=0.705 Sum_probs=58.9
Q ss_pred HHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhhccc
Q 000065 1503 EEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQATM 1582 (2462)
Q Consensus 1503 ~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~a~ekF~~I~~AYEvLsd~~ 1582 (2462)
.++|++|||++ +++.++||++||+|+++|||||+++..++|+.|++||++|+|+.
T Consensus 8 ~~~y~iLgl~~-------------------------~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~ 62 (73)
T 2och_A 8 TGYYDVLGVKP-------------------------DASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEK 62 (73)
T ss_dssp CCHHHHHTCCT-------------------------TCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHH
T ss_pred CCHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHH
Confidence 46899999994 78999999999999999999999988899999999999999964
Q ss_pred cCCCCCChhhHHhhhhhccccccccCC
Q 000065 1583 QGLQGPQPWRLLLLLKGQCILYRRYGD 1609 (2462)
Q Consensus 1583 ~r~~~p~~~~~~liLr~qr~~Ydr~g~ 1609 (2462)
+|..||++|+
T Consensus 63 -----------------~R~~YD~~g~ 72 (73)
T 2och_A 63 -----------------KRQIYDQGGE 72 (73)
T ss_dssp -----------------HHHHHHHTC-
T ss_pred -----------------HHHHHHhcCC
Confidence 6788999986
No 2
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=4.3e-12 Score=124.33 Aligned_cols=70 Identities=34% Similarity=0.567 Sum_probs=61.5
Q ss_pred CCchHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCC---chHHHHHHHHHHH
Q 000065 1499 DLSEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNP---EGREKFLAVQKAY 1575 (2462)
Q Consensus 1499 ~~s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp---~a~ekF~~I~~AY 1575 (2462)
.++..++|++|||++ +++.++||++||+|+++|||||++ ++.++|+.|++||
T Consensus 3 ~~~~~~~y~iLgv~~-------------------------~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay 57 (79)
T 2dn9_A 3 SGSSGDYYQILGVPR-------------------------NASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAY 57 (79)
T ss_dssp SSCCSCHHHHHTCCT-------------------------TCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHH
T ss_pred CCCCCCHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHH
Confidence 455668999999994 789999999999999999999986 4689999999999
Q ss_pred HHhhccccCCCCCChhhHHhhhhhccccccccCCc
Q 000065 1576 ERLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDV 1610 (2462)
Q Consensus 1576 EvLsd~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~ 1610 (2462)
++|+|+. +|..||++|..
T Consensus 58 ~~L~d~~-----------------~R~~YD~~g~~ 75 (79)
T 2dn9_A 58 EVLSDEV-----------------KRKQYDAYGSG 75 (79)
T ss_dssp HHHHSHH-----------------HHHHHHHSCCC
T ss_pred HHHCCHH-----------------HHHHHHhccCc
Confidence 9999964 67889999864
No 3
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.23 E-value=8e-12 Score=125.18 Aligned_cols=62 Identities=32% Similarity=0.509 Sum_probs=55.7
Q ss_pred CCCCchHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc----hHHHHHHHH
Q 000065 1497 PMDLSEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE----GREKFLAVQ 1572 (2462)
Q Consensus 1497 ~~~~s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~----a~ekF~~I~ 1572 (2462)
|..++..++|+||||+. +++.++||+|||+|+++||||||++ +.++|+.|+
T Consensus 10 ~~~~~~~~~y~vLgv~~-------------------------~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~ 64 (88)
T 1iur_A 10 PRGSILKEVTSVVEQAW-------------------------KLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQ 64 (88)
T ss_dssp CSSSCHHHHHHHHHHTT-------------------------SSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHhCCCC-------------------------CCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHH
Confidence 45678899999999994 7899999999999999999999986 679999999
Q ss_pred HHHHHhhcccc
Q 000065 1573 KAYERLQATMQ 1583 (2462)
Q Consensus 1573 ~AYEvLsd~~~ 1583 (2462)
+||++|+|...
T Consensus 65 ~AYevL~~~~~ 75 (88)
T 1iur_A 65 NEINRLEKQAF 75 (88)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHhhcc
Confidence 99999999653
No 4
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=4.6e-12 Score=123.85 Aligned_cols=70 Identities=36% Similarity=0.565 Sum_probs=61.8
Q ss_pred CCchHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCC--chHHHHHHHHHHHH
Q 000065 1499 DLSEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNP--EGREKFLAVQKAYE 1576 (2462)
Q Consensus 1499 ~~s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp--~a~ekF~~I~~AYE 1576 (2462)
.++..++|++|||++ +++.++||+|||+|+++|||||++ ++.++|+.|++||+
T Consensus 3 ~~~~~~~y~iLgv~~-------------------------~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~ 57 (78)
T 2ctp_A 3 SGSSGDYYEILGVSR-------------------------GASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYA 57 (78)
T ss_dssp CSCSCCHHHHHTCCT-------------------------TCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHH
Confidence 456678999999994 789999999999999999999996 57899999999999
Q ss_pred HhhccccCCCCCChhhHHhhhhhccccccccCCc
Q 000065 1577 RLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDV 1610 (2462)
Q Consensus 1577 vLsd~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~ 1610 (2462)
+|+|+. +|..||++|..
T Consensus 58 ~L~d~~-----------------~R~~YD~~~~~ 74 (78)
T 2ctp_A 58 VLSNPE-----------------KRKQYDQFGSG 74 (78)
T ss_dssp HHTSHH-----------------HHHHHHHTCSC
T ss_pred HHCCHH-----------------HHHHHHHcCcc
Confidence 999964 67889999864
No 5
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.22 E-value=6.1e-12 Score=126.92 Aligned_cols=68 Identities=37% Similarity=0.619 Sum_probs=60.6
Q ss_pred chHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhhc
Q 000065 1501 SEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQA 1580 (2462)
Q Consensus 1501 s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~a~ekF~~I~~AYEvLsd 1580 (2462)
...++|+||||++ +++.++||++||+|+++|||||+++..++|+.|++||++|+|
T Consensus 6 ~~~~~y~iLgv~~-------------------------~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d 60 (92)
T 2o37_A 6 KETKLYDLLGVSP-------------------------SANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILND 60 (92)
T ss_dssp SCCHHHHHHTCCT-------------------------TCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTS
T ss_pred cCCCHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCC
Confidence 4568999999994 789999999999999999999999888999999999999999
Q ss_pred cccCCCCCChhhHHhhhhhccccccccCCc
Q 000065 1581 TMQGLQGPQPWRLLLLLKGQCILYRRYGDV 1610 (2462)
Q Consensus 1581 ~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~ 1610 (2462)
+. +|..||++|..
T Consensus 61 ~~-----------------~R~~YD~~~~~ 73 (92)
T 2o37_A 61 PQ-----------------KREIYDQYGLE 73 (92)
T ss_dssp HH-----------------HHHHHHHHCHH
T ss_pred HH-----------------HHHHHHHHCHH
Confidence 65 57778888753
No 6
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=9.2e-12 Score=124.61 Aligned_cols=70 Identities=34% Similarity=0.529 Sum_probs=61.0
Q ss_pred CCchHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc--hHHHHHHHHHHHH
Q 000065 1499 DLSEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE--GREKFLAVQKAYE 1576 (2462)
Q Consensus 1499 ~~s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~--a~ekF~~I~~AYE 1576 (2462)
..+..++|+||||++ +++.++||++||+|+++|||||++. +.++|+.|++||+
T Consensus 3 ~~~~~~~y~iLgv~~-------------------------~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~ 57 (88)
T 2ctr_A 3 SGSSGSYYDILGVPK-------------------------SASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYE 57 (88)
T ss_dssp SCCCCSHHHHHTCCT-------------------------TCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHcCcCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHH
Confidence 345567999999994 7899999999999999999999974 6889999999999
Q ss_pred HhhccccCCCCCChhhHHhhhhhccccccccCCc
Q 000065 1577 RLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDV 1610 (2462)
Q Consensus 1577 vLsd~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~ 1610 (2462)
+|+|+. +|..||++|..
T Consensus 58 ~L~d~~-----------------~R~~Yd~~~~~ 74 (88)
T 2ctr_A 58 TLSDAN-----------------RRKEYDTLGHS 74 (88)
T ss_dssp HHHSSH-----------------HHHHHHHTCHH
T ss_pred HHCCHH-----------------HHHHHHHhCcc
Confidence 999975 67789988854
No 7
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=8.3e-12 Score=123.11 Aligned_cols=68 Identities=38% Similarity=0.686 Sum_probs=60.0
Q ss_pred chHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc----hHHHHHHHHHHHH
Q 000065 1501 SEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE----GREKFLAVQKAYE 1576 (2462)
Q Consensus 1501 s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~----a~ekF~~I~~AYE 1576 (2462)
...++|+||||++ +++.++||+|||+|+++|||||+++ +.++|+.|++||+
T Consensus 7 ~~~~~y~iLgv~~-------------------------~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~ 61 (82)
T 2ej7_A 7 GMVDYYEVLDVPR-------------------------QASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYE 61 (82)
T ss_dssp SSCCHHHHTTCCT-------------------------TCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHH
Confidence 3467999999994 7899999999999999999999974 5679999999999
Q ss_pred HhhccccCCCCCChhhHHhhhhhccccccccCCc
Q 000065 1577 RLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDV 1610 (2462)
Q Consensus 1577 vLsd~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~ 1610 (2462)
+|+|+. +|..||++|..
T Consensus 62 ~L~d~~-----------------~R~~YD~~g~~ 78 (82)
T 2ej7_A 62 VLSDAK-----------------KRDIYDRYGSG 78 (82)
T ss_dssp HHSSTT-----------------HHHHHHHTCCC
T ss_pred HHCCHH-----------------HHHHHHHcCcc
Confidence 999965 67889999865
No 8
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.19 E-value=1.1e-11 Score=123.98 Aligned_cols=68 Identities=31% Similarity=0.593 Sum_probs=60.2
Q ss_pred chHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCC--chHHHHHHHHHHHHHh
Q 000065 1501 SEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNP--EGREKFLAVQKAYERL 1578 (2462)
Q Consensus 1501 s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp--~a~ekF~~I~~AYEvL 1578 (2462)
...++|++|||++ +++.++||++||+|+++|||||++ ++.++|+.|++||++|
T Consensus 15 ~~~d~y~iLgv~~-------------------------~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L 69 (88)
T 2cug_A 15 LDFDPYRVLGVSR-------------------------TASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEIL 69 (88)
T ss_dssp SSSCHHHHHTCCT-------------------------TCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHcCcCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHH
Confidence 3457999999994 789999999999999999999986 5789999999999999
Q ss_pred hccccCCCCCChhhHHhhhhhccccccccCCc
Q 000065 1579 QATMQGLQGPQPWRLLLLLKGQCILYRRYGDV 1610 (2462)
Q Consensus 1579 sd~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~ 1610 (2462)
+|+. +|..||++|+.
T Consensus 70 ~d~~-----------------~R~~YD~~g~~ 84 (88)
T 2cug_A 70 SNEE-----------------KRTNYDHYGSG 84 (88)
T ss_dssp HSHH-----------------HHHHHHHHTTC
T ss_pred CCHH-----------------HHHHHHHcCCC
Confidence 9964 67789999864
No 9
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.18 E-value=9.6e-12 Score=121.30 Aligned_cols=65 Identities=34% Similarity=0.673 Sum_probs=58.4
Q ss_pred HHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCC--chHHHHHHHHHHHHHhhcc
Q 000065 1504 EACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNP--EGREKFLAVQKAYERLQAT 1581 (2462)
Q Consensus 1504 ~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp--~a~ekF~~I~~AYEvLsd~ 1581 (2462)
++|++|||++ +++.++||+|||+|+++|||||++ ++.++|+.|++||++|+|+
T Consensus 4 ~~y~iLgv~~-------------------------~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~ 58 (77)
T 1hdj_A 4 DYYQTLGLAR-------------------------GASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDP 58 (77)
T ss_dssp CSHHHHTCCT-------------------------TCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCH
T ss_pred CHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCH
Confidence 5799999994 789999999999999999999986 5789999999999999996
Q ss_pred ccCCCCCChhhHHhhhhhccccccccCCc
Q 000065 1582 MQGLQGPQPWRLLLLLKGQCILYRRYGDV 1610 (2462)
Q Consensus 1582 ~~r~~~p~~~~~~liLr~qr~~Ydr~g~~ 1610 (2462)
. +|..||++|..
T Consensus 59 ~-----------------~R~~Yd~~~~~ 70 (77)
T 1hdj_A 59 R-----------------KREIFDRYGEE 70 (77)
T ss_dssp H-----------------HHHHHHHTCGG
T ss_pred H-----------------HHHHHHHHccc
Confidence 4 67889999865
No 10
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.16 E-value=1.8e-11 Score=127.21 Aligned_cols=70 Identities=36% Similarity=0.674 Sum_probs=61.2
Q ss_pred CCCchHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc---hHHHHHHHHHH
Q 000065 1498 MDLSEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE---GREKFLAVQKA 1574 (2462)
Q Consensus 1498 ~~~s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~---a~ekF~~I~~A 1574 (2462)
...+..++|++|||++ +++.++||+|||+|+++|||||+++ +.++|+.|++|
T Consensus 12 ~~~~~~~~Y~vLgv~~-------------------------~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~A 66 (109)
T 2ctw_A 12 LSTSGESLYHVLGLDK-------------------------NATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNA 66 (109)
T ss_dssp TTSCSCCHHHHHTCCT-------------------------TCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHcCcCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHH
Confidence 4456678999999994 7899999999999999999999974 68899999999
Q ss_pred HHHhhccccCCCCCChhhHHhhhhhccccccccCC
Q 000065 1575 YERLQATMQGLQGPQPWRLLLLLKGQCILYRRYGD 1609 (2462)
Q Consensus 1575 YEvLsd~~~r~~~p~~~~~~liLr~qr~~Ydr~g~ 1609 (2462)
|++|+|+. +|..||++|.
T Consensus 67 y~vL~d~~-----------------~R~~YD~~g~ 84 (109)
T 2ctw_A 67 HAILTDAT-----------------KRNIYDKYGS 84 (109)
T ss_dssp HHHHTCHH-----------------HHHHHHHTCH
T ss_pred HHHHcCHH-----------------HHHHHHHhcc
Confidence 99999965 6778888885
No 11
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=2.5e-11 Score=124.06 Aligned_cols=60 Identities=23% Similarity=0.458 Sum_probs=53.9
Q ss_pred CCCchHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc---hHHHHHHHHHH
Q 000065 1498 MDLSEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE---GREKFLAVQKA 1574 (2462)
Q Consensus 1498 ~~~s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~---a~ekF~~I~~A 1574 (2462)
..++..++|+||||++ +++.++||+|||+|+++|||||+++ +.++|+.|++|
T Consensus 12 ~~~~~~~~Y~vLgv~~-------------------------~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~A 66 (99)
T 2yua_A 12 CSYSRTALYDLLGVPS-------------------------TATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQA 66 (99)
T ss_dssp CSSCSSHHHHHHTCCT-------------------------TCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHH
T ss_pred CCCCccCHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHH
Confidence 3466789999999994 7899999999999999999999964 78899999999
Q ss_pred HHHhhccc
Q 000065 1575 YERLQATM 1582 (2462)
Q Consensus 1575 YEvLsd~~ 1582 (2462)
|++|+|+.
T Consensus 67 y~~L~d~~ 74 (99)
T 2yua_A 67 YVVLGSAT 74 (99)
T ss_dssp HHHTTSHH
T ss_pred HHHHCCHH
Confidence 99999975
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=2.4e-11 Score=122.53 Aligned_cols=69 Identities=36% Similarity=0.608 Sum_probs=59.9
Q ss_pred chHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc----hHHHHHHHHHHHH
Q 000065 1501 SEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE----GREKFLAVQKAYE 1576 (2462)
Q Consensus 1501 s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~----a~ekF~~I~~AYE 1576 (2462)
...++|+||||++ +++.++||++||+|+++|||||+++ +.++|+.|++||+
T Consensus 7 ~~~~~y~iLgv~~-------------------------~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~ 61 (92)
T 2dmx_A 7 GMANYYEVLGVQA-------------------------SASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYE 61 (92)
T ss_dssp CCCCHHHHHTCCT-------------------------TCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHH
Confidence 3457999999994 6788999999999999999999974 5789999999999
Q ss_pred HhhccccCCCCCChhhHHhhhhhccccccccCCcC
Q 000065 1577 RLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDVL 1611 (2462)
Q Consensus 1577 vLsd~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~l 1611 (2462)
+|+|+. +|..||++|...
T Consensus 62 ~L~d~~-----------------~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 62 VLSDSK-----------------KRSLYDRAGCDS 79 (92)
T ss_dssp HHHSHH-----------------HHHHHHHHCSCS
T ss_pred HHCCHH-----------------HHHHHHHhCccc
Confidence 999964 677899988653
No 13
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=4.2e-11 Score=120.41 Aligned_cols=59 Identities=25% Similarity=0.425 Sum_probs=52.8
Q ss_pred hHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCC--chHHHHHHHHHHHHHhh
Q 000065 1502 EEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNP--EGREKFLAVQKAYERLQ 1579 (2462)
Q Consensus 1502 ~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp--~a~ekF~~I~~AYEvLs 1579 (2462)
..++|+||||++ +++.++||+|||+|+++|||||++ ++.++|+.|++||++|+
T Consensus 26 ~~~~y~iLgv~~-------------------------~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~ 80 (90)
T 2ys8_A 26 SKDSWDMLGVKP-------------------------GASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALL 80 (90)
T ss_dssp CSSHHHHHTCCT-------------------------TCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHcCcCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHC
Confidence 357999999994 789999999999999999999994 68899999999999999
Q ss_pred ccccCC
Q 000065 1580 ATMQGL 1585 (2462)
Q Consensus 1580 d~~~r~ 1585 (2462)
|+..|.
T Consensus 81 d~~~R~ 86 (90)
T 2ys8_A 81 KNIKSG 86 (90)
T ss_dssp HHHCCS
T ss_pred Cccccc
Confidence 986543
No 14
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=1.5e-11 Score=128.47 Aligned_cols=70 Identities=26% Similarity=0.337 Sum_probs=60.9
Q ss_pred chHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc---hHHHHHHHHHHHHH
Q 000065 1501 SEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE---GREKFLAVQKAYER 1577 (2462)
Q Consensus 1501 s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~---a~ekF~~I~~AYEv 1577 (2462)
...++|++|||++ +++.++||+|||+|+++|||||+++ +.++|+.|++||++
T Consensus 18 ~~~d~Y~iLgv~~-------------------------~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~v 72 (112)
T 2ctq_A 18 DTEDYYTLLGCDE-------------------------LSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEI 72 (112)
T ss_dssp CCCCHHHHTTCCT-------------------------TSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHH
Confidence 4568999999994 7899999999999999999999863 78999999999999
Q ss_pred hhccccCCCCCChhhHHhhhhhccccccccCCcCC
Q 000065 1578 LQATMQGLQGPQPWRLLLLLKGQCILYRRYGDVLE 1612 (2462)
Q Consensus 1578 Lsd~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~l~ 1612 (2462)
|+|+. +|..||++|....
T Consensus 73 L~d~~-----------------~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 73 LTNEE-----------------SRARYDHWRRSQM 90 (112)
T ss_dssp HHSHH-----------------HHHHHHHHHHHTC
T ss_pred HCCHH-----------------HHHHHHHhhhhcc
Confidence 99965 6778998886543
No 15
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.13 E-value=2e-11 Score=124.91 Aligned_cols=65 Identities=35% Similarity=0.694 Sum_probs=57.7
Q ss_pred HHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc----hHHHHHHHHHHHHHhh
Q 000065 1504 EACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE----GREKFLAVQKAYERLQ 1579 (2462)
Q Consensus 1504 ~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~----a~ekF~~I~~AYEvLs 1579 (2462)
++|+||||++ +++.++||+|||+|+++|||||+++ +.++|+.|++||++|+
T Consensus 3 d~Y~iLgv~~-------------------------~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~ 57 (99)
T 2lgw_A 3 SYYEILDVPR-------------------------SASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLS 57 (99)
T ss_dssp CHHHHSSSCT-------------------------TSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHC
Confidence 5799999994 7899999999999999999999975 6789999999999999
Q ss_pred ccccCCCCCChhhHHhhhhhccccccccCCc
Q 000065 1580 ATMQGLQGPQPWRLLLLLKGQCILYRRYGDV 1610 (2462)
Q Consensus 1580 d~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~ 1610 (2462)
|+. +|..||++|..
T Consensus 58 d~~-----------------~R~~YD~~g~~ 71 (99)
T 2lgw_A 58 DKH-----------------KREIYDRYGRE 71 (99)
T ss_dssp SHH-----------------HHHHHHHHHHC
T ss_pred CHH-----------------HHHHHHHhCcc
Confidence 964 67788888754
No 16
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.12 E-value=4.6e-11 Score=117.43 Aligned_cols=58 Identities=14% Similarity=0.305 Sum_probs=50.7
Q ss_pred chHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhhc
Q 000065 1501 SEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQA 1580 (2462)
Q Consensus 1501 s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~a~ekF~~I~~AYEvLsd 1580 (2462)
..+++|++|||+++ ..++.++||+|||+|+++|||||+++ .++|++|++||++|+|
T Consensus 9 ~~~~~y~iLgl~~~-----------------------~~a~~~eIk~aYr~la~~~HPDk~~~-~~~f~~i~~AYe~L~~ 64 (79)
T 1faf_A 9 DKERLLELLKLPRQ-----------------------LWGDFGRMQQAYKQQSLLLHPDKGGS-HALMQELNSLWGTFKT 64 (79)
T ss_dssp HHHHHHHHHTCCSS-----------------------STTCHHHHHHHHHHHHHHSSGGGSCC-HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCCC-----------------------CCCCHHHHHHHHHHHHHHHCcCCCCC-HHHHHHHHHHHHHHhh
Confidence 45789999999952 12899999999999999999999875 6899999999999999
Q ss_pred cc
Q 000065 1581 TM 1582 (2462)
Q Consensus 1581 ~~ 1582 (2462)
+.
T Consensus 65 ~~ 66 (79)
T 1faf_A 65 EV 66 (79)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 17
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.11 E-value=2.4e-11 Score=127.20 Aligned_cols=55 Identities=18% Similarity=0.382 Sum_probs=49.5
Q ss_pred hHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCH--HHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhh
Q 000065 1502 EEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDE--EKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQ 1579 (2462)
Q Consensus 1502 ~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e--~~IKkAYRkLa~k~HPDKnp~a~ekF~~I~~AYEvLs 1579 (2462)
..++|+||||++ +++. ++||+|||+|+++|||||+++ .++|++|++||++|+
T Consensus 7 ~~~~Y~iLgv~~-------------------------~as~~~~eIk~aYr~la~~~HPDk~~~-~e~f~~I~~AYevL~ 60 (114)
T 1gh6_A 7 SLQLMDLLGLER-------------------------SAWGNIPLMRKAYLKKCKEFHPDKGGD-EEKMKKMNTLYKKME 60 (114)
T ss_dssp HHHHHHHTTCCT-------------------------TSCSCHHHHHHHHHHTTTTCCTTTCCT-TTTTHHHHHHHHHHH
T ss_pred hhhHHHHcCCCC-------------------------CCCcCHHHHHHHHHHHHHHHCCCCCcc-HHHHHHHHHHHHHHC
Confidence 457999999995 5565 999999999999999999987 689999999999999
Q ss_pred ccc
Q 000065 1580 ATM 1582 (2462)
Q Consensus 1580 d~~ 1582 (2462)
|+.
T Consensus 61 d~~ 63 (114)
T 1gh6_A 61 DGV 63 (114)
T ss_dssp HHH
T ss_pred CHH
Confidence 975
No 18
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.11 E-value=2.3e-11 Score=122.94 Aligned_cols=68 Identities=26% Similarity=0.405 Sum_probs=58.7
Q ss_pred CchHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCC---------chHHHHHH
Q 000065 1500 LSEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNP---------EGREKFLA 1570 (2462)
Q Consensus 1500 ~s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp---------~a~ekF~~ 1570 (2462)
+...++|+||||++ +++.++||+|||+|+++|||||++ ++.++|+.
T Consensus 13 ~~~~~~y~iLgv~~-------------------------~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~ 67 (94)
T 1wjz_A 13 TLKKDWYSILGADP-------------------------SANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIE 67 (94)
T ss_dssp SSCSCHHHHTTCCT-------------------------TCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHH
T ss_pred CCCCChHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHH
Confidence 55678999999994 789999999999999999999986 36789999
Q ss_pred HHHHHHHhhccccCCCCCChhhHHhhhhhccccccccCC
Q 000065 1571 VQKAYERLQATMQGLQGPQPWRLLLLLKGQCILYRRYGD 1609 (2462)
Q Consensus 1571 I~~AYEvLsd~~~r~~~p~~~~~~liLr~qr~~Ydr~g~ 1609 (2462)
|++||++|+|+. +|..||.+..
T Consensus 68 i~~Ay~~L~d~~-----------------~R~~YD~~l~ 89 (94)
T 1wjz_A 68 IDQAWKILGNEE-----------------TKKKYDLQRS 89 (94)
T ss_dssp HHHHHHHHSSSS-----------------HHHHHHHHSC
T ss_pred HHHHHHHHCCHH-----------------HHHHHHHHcc
Confidence 999999999975 5667777654
No 19
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.09 E-value=9.6e-11 Score=112.85 Aligned_cols=60 Identities=25% Similarity=0.337 Sum_probs=53.0
Q ss_pred CCCchHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHH
Q 000065 1498 MDLSEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYER 1577 (2462)
Q Consensus 1498 ~~~s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~a~ekF~~I~~AYEv 1577 (2462)
..|+.+++|+|||+++ .+++.++||++||+|+++|||||++ ..++|++|++||++
T Consensus 9 ~~m~~~~~y~iLgl~~------------------------~~a~~~eIk~ayr~l~~~~HPDk~g-~~~~f~~i~~Aye~ 63 (71)
T 2guz_A 9 PKMNSKEALQILNLTE------------------------NTLTKKKLKEVHRKIMLANHPDKGG-SPFLATKINEAKDF 63 (71)
T ss_dssp SSCCHHHHHHHTTCCT------------------------TTCCHHHHHHHHHHHHHHHCGGGTC-CHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCCC------------------------CCCCHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHH
Confidence 4578899999999994 1579999999999999999999974 46799999999999
Q ss_pred hhccc
Q 000065 1578 LQATM 1582 (2462)
Q Consensus 1578 Lsd~~ 1582 (2462)
|+++.
T Consensus 64 L~~~~ 68 (71)
T 2guz_A 64 LEKRG 68 (71)
T ss_dssp HHHHC
T ss_pred Hhhhh
Confidence 99864
No 20
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.04 E-value=2.8e-11 Score=124.49 Aligned_cols=66 Identities=36% Similarity=0.713 Sum_probs=58.2
Q ss_pred HHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCC---chHHHHHHHHHHHHHhhc
Q 000065 1504 EACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNP---EGREKFLAVQKAYERLQA 1580 (2462)
Q Consensus 1504 ~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp---~a~ekF~~I~~AYEvLsd 1580 (2462)
++|+||||++ +++.++||+|||+|+++|||||++ +++++|+.|++||++|+|
T Consensus 4 ~~y~iLgv~~-------------------------~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d 58 (103)
T 1bq0_A 4 DYYEILGVSK-------------------------TAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTD 58 (103)
T ss_dssp CSTTTTSSCS-------------------------SCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTC
T ss_pred CHHHHcCcCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCC
Confidence 5799999994 789999999999999999999986 478999999999999999
Q ss_pred cccCCCCCChhhHHhhhhhccccccccCCcC
Q 000065 1581 TMQGLQGPQPWRLLLLLKGQCILYRRYGDVL 1611 (2462)
Q Consensus 1581 ~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~l 1611 (2462)
+. +|..||++|+..
T Consensus 59 ~~-----------------~R~~YD~~~~~~ 72 (103)
T 1bq0_A 59 SQ-----------------KRAAYDQYGHAA 72 (103)
T ss_dssp SH-----------------HHHHTTTSTTTS
T ss_pred HH-----------------HHHHHHHHhhhh
Confidence 75 577899988654
No 21
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.02 E-value=4.5e-11 Score=120.38 Aligned_cols=43 Identities=23% Similarity=0.491 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCc------hHHHHHHHHHHHHHhhc
Q 000065 1538 ENIDEEKLKRQYRKLAMKYHPDKNPE------GREKFLAVQKAYERLQA 1580 (2462)
Q Consensus 1538 ~~a~e~~IKkAYRkLa~k~HPDKnp~------a~ekF~~I~~AYEvLsd 1580 (2462)
+.+++++|||||||+|++||||||++ ++++|+.|++|||+|.+
T Consensus 43 ~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 43 DLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp GSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 47899999999999999999999974 57899999999999986
No 22
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.02 E-value=7.7e-11 Score=122.39 Aligned_cols=67 Identities=34% Similarity=0.517 Sum_probs=58.2
Q ss_pred hHHHHHHhcCCccCCCCCCccccccchhhcccccccCCC-CHHHHHHHHHHHHHHhCCCCCCc------hHHHHHHHHHH
Q 000065 1502 EEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENI-DEEKLKRQYRKLAMKYHPDKNPE------GREKFLAVQKA 1574 (2462)
Q Consensus 1502 ~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a-~e~~IKkAYRkLa~k~HPDKnp~------a~ekF~~I~~A 1574 (2462)
..++|++|||++ ++ +.++||+|||+|+++|||||+++ +.++|+.|++|
T Consensus 14 ~~~~y~iLgv~~-------------------------~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~A 68 (109)
T 2qsa_A 14 LENCYDVLEVNR-------------------------EEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATA 68 (109)
T ss_dssp TSCHHHHTTCCG-------------------------GGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHcCCCC-------------------------CCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHH
Confidence 457999999994 67 99999999999999999999974 67899999999
Q ss_pred HHHhhccccCCCCCChhhHHhhhhhccccccccCCc
Q 000065 1575 YERLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDV 1610 (2462)
Q Consensus 1575 YEvLsd~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~ 1610 (2462)
|++|+|+. +|..||+++..
T Consensus 69 Y~~L~d~~-----------------~R~~YD~~~~~ 87 (109)
T 2qsa_A 69 YETLKDDE-----------------AKTNYDYYLDH 87 (109)
T ss_dssp HHHHHSHH-----------------HHHHHHHHHHC
T ss_pred HHHHCCHH-----------------HHHHHHHhccC
Confidence 99999975 56778887754
No 23
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.01 E-value=5.5e-11 Score=132.43 Aligned_cols=67 Identities=16% Similarity=0.337 Sum_probs=54.8
Q ss_pred hHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhhcc
Q 000065 1502 EEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQAT 1581 (2462)
Q Consensus 1502 ~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~a~ekF~~I~~AYEvLsd~ 1581 (2462)
..++|++|||+++. +.+.++||+|||++|++|||||+++ .++|++|++||++|+|+
T Consensus 10 ~~d~Y~vLGl~~~a-----------------------s~~~~eIKkAYRkLa~~~HPDk~~~-~e~F~~I~~AYevLsdp 65 (174)
T 2pf4_E 10 SLQLMDLLGLERSA-----------------------WGNIPLMRKAYLKKCKEFHPDKGGD-EEKMKKMNTLYKKMEDG 65 (174)
T ss_dssp HHHHHHTTTCCGGG-----------------------TTCHHHHHHHHHHHGGGCSCC---C-CTTTTHHHHHHHHHHHH
T ss_pred cccHHHHcCCCCCC-----------------------CcCHHHHHHHHHHHHHHHCcCCCCC-HHHHHHHHHHHHHhCCH
Confidence 46899999999521 2236999999999999999999987 58999999999999996
Q ss_pred ccCCCCCChhhHHhhhhhccccccccCC
Q 000065 1582 MQGLQGPQPWRLLLLLKGQCILYRRYGD 1609 (2462)
Q Consensus 1582 ~~r~~~p~~~~~~liLr~qr~~Ydr~g~ 1609 (2462)
. +|..||+||.
T Consensus 66 ~-----------------kR~~YD~~G~ 76 (174)
T 2pf4_E 66 V-----------------KYAHQPDFGG 76 (174)
T ss_dssp H-----------------HHHTSCGGGG
T ss_pred H-----------------HHHHHhccCC
Confidence 5 6788999996
No 24
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.98 E-value=2e-10 Score=130.89 Aligned_cols=66 Identities=32% Similarity=0.598 Sum_probs=58.9
Q ss_pred HHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCC---chHHHHHHHHHHHHHhhc
Q 000065 1504 EACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNP---EGREKFLAVQKAYERLQA 1580 (2462)
Q Consensus 1504 ~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp---~a~ekF~~I~~AYEvLsd 1580 (2462)
++|++||+++ +++.++||+|||+|+++|||||++ ++.++|+.|++||++|+|
T Consensus 3 ~~y~~l~~~~-------------------------~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~ 57 (210)
T 3apq_A 3 NFYSLLGVSK-------------------------TASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKD 57 (210)
T ss_dssp CHHHHHTCCT-------------------------TCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTS
T ss_pred CHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCC
Confidence 5899999994 789999999999999999999996 478999999999999999
Q ss_pred cccCCCCCChhhHHhhhhhccccccccCCcC
Q 000065 1581 TMQGLQGPQPWRLLLLLKGQCILYRRYGDVL 1611 (2462)
Q Consensus 1581 ~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~l 1611 (2462)
+. +|..||++|+..
T Consensus 58 ~~-----------------~r~~yd~~~~~~ 71 (210)
T 3apq_A 58 ED-----------------LRKKYDKYGEKG 71 (210)
T ss_dssp HH-----------------HHHHHHHHTTTT
T ss_pred HH-----------------HHHHHHHhcccc
Confidence 65 678899998653
No 25
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.95 E-value=7.3e-11 Score=144.07 Aligned_cols=60 Identities=30% Similarity=0.481 Sum_probs=0.0
Q ss_pred CCCchHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCC--chHHHHHHHHHHH
Q 000065 1498 MDLSEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNP--EGREKFLAVQKAY 1575 (2462)
Q Consensus 1498 ~~~s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp--~a~ekF~~I~~AY 1575 (2462)
..|+..++|++|||++ +++.++||+|||+||++||||||+ +++++|++|++||
T Consensus 23 ~~m~~~d~Y~vLgv~~-------------------------~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay 77 (329)
T 3lz8_A 23 NAMELKDYYAILGVQP-------------------------TDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAW 77 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCHHHHcCcCC-------------------------CCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHH
Confidence 3466789999999994 789999999999999999999986 4789999999999
Q ss_pred HHhhccc
Q 000065 1576 ERLQATM 1582 (2462)
Q Consensus 1576 EvLsd~~ 1582 (2462)
|+|+|+.
T Consensus 78 ~vL~d~~ 84 (329)
T 3lz8_A 78 EVLKDEQ 84 (329)
T ss_dssp -------
T ss_pred HHhhhhh
Confidence 9999976
No 26
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=98.92 E-value=5e-10 Score=123.18 Aligned_cols=59 Identities=27% Similarity=0.503 Sum_probs=52.1
Q ss_pred CchHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc---------hHHHHHH
Q 000065 1500 LSEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE---------GREKFLA 1570 (2462)
Q Consensus 1500 ~s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~---------a~ekF~~ 1570 (2462)
+...++|++|||++ +++.++||+|||+|+++|||||++. +.++|+.
T Consensus 7 ~~~~~~y~iLgv~~-------------------------~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~ 61 (155)
T 2l6l_A 7 MPKKDWYSILGADP-------------------------SANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIE 61 (155)
T ss_dssp CCCSHHHHHHTCCT-------------------------TCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHH
T ss_pred CCCCChhHhcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHH
Confidence 45578999999994 7889999999999999999999864 3589999
Q ss_pred HHHHHHHhhcccc
Q 000065 1571 VQKAYERLQATMQ 1583 (2462)
Q Consensus 1571 I~~AYEvLsd~~~ 1583 (2462)
|++||++|+||..
T Consensus 62 i~~Ay~~L~dp~~ 74 (155)
T 2l6l_A 62 IDQAWKILGNEET 74 (155)
T ss_dssp HHHHHHHSSSHHH
T ss_pred HHHHHHHcCCHHH
Confidence 9999999999763
No 27
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=98.89 E-value=2.5e-10 Score=118.15 Aligned_cols=44 Identities=20% Similarity=0.450 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCc----------hHHHHHHHHHHHHHhhccc
Q 000065 1539 NIDEEKLKRQYRKLAMKYHPDKNPE----------GREKFLAVQKAYERLQATM 1582 (2462)
Q Consensus 1539 ~a~e~~IKkAYRkLa~k~HPDKnp~----------a~ekF~~I~~AYEvLsd~~ 1582 (2462)
.++.++||+||||++++||||||++ ++++|+.|++||++|+|+.
T Consensus 51 ~As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 51 MIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 4899999999999999999999863 4789999999999999963
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=98.81 E-value=7.6e-10 Score=124.01 Aligned_cols=58 Identities=24% Similarity=0.389 Sum_probs=51.2
Q ss_pred HHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc------hHHHHHHHHHHHH
Q 000065 1503 EEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE------GREKFLAVQKAYE 1576 (2462)
Q Consensus 1503 ~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~------a~ekF~~I~~AYE 1576 (2462)
+++|++|||+. +++.++||+|||+++++|||||+++ +.++|+.|++||+
T Consensus 117 ~d~Y~vLgv~~-------------------------~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYe 171 (182)
T 1n4c_A 117 ETKWKPVGMAD-------------------------LVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWS 171 (182)
T ss_dssp CCCCCCCCGGG-------------------------GSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHH
Confidence 46899999984 7899999999999999999999864 5789999999999
Q ss_pred HhhccccCC
Q 000065 1577 RLQATMQGL 1585 (2462)
Q Consensus 1577 vLsd~~~r~ 1585 (2462)
+|+|+..|.
T Consensus 172 vLsD~~kR~ 180 (182)
T 1n4c_A 172 EFENQGQKP 180 (182)
T ss_dssp HHHHHHSSC
T ss_pred HHCCHHhhh
Confidence 999986443
No 29
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=98.77 E-value=3.7e-09 Score=118.14 Aligned_cols=56 Identities=18% Similarity=0.430 Sum_probs=48.1
Q ss_pred HHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc--------hHHHHHHHHHHH
Q 000065 1504 EACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE--------GREKFLAVQKAY 1575 (2462)
Q Consensus 1504 ~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~--------a~ekF~~I~~AY 1575 (2462)
++|++||++++. ++|..+||++||+|+++|||||+++ +.++|+.|++||
T Consensus 2 d~y~lLgl~~~a-----------------------~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY 58 (171)
T 1fpo_A 2 DYFTLFGLPARY-----------------------QLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAW 58 (171)
T ss_dssp HHHHHTTCCSSS-----------------------CCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHCCCCCCC-----------------------CCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 589999999521 3399999999999999999999874 346899999999
Q ss_pred HHhhccc
Q 000065 1576 ERLQATM 1582 (2462)
Q Consensus 1576 EvLsd~~ 1582 (2462)
++|+||.
T Consensus 59 ~vL~dp~ 65 (171)
T 1fpo_A 59 QTLRHPL 65 (171)
T ss_dssp HHHHSHH
T ss_pred HHHcCch
Confidence 9999975
No 30
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=98.76 E-value=3.8e-09 Score=121.30 Aligned_cols=57 Identities=23% Similarity=0.387 Sum_probs=49.1
Q ss_pred HHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc--------hHHHHHHHHHH
Q 000065 1503 EEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE--------GREKFLAVQKA 1574 (2462)
Q Consensus 1503 ~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~--------a~ekF~~I~~A 1574 (2462)
.++|++||++++ -++|..+||++||+|+++|||||+++ +.++|+.|++|
T Consensus 43 ~d~y~lLgv~~~-----------------------~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~A 99 (207)
T 3bvo_A 43 RDYFSLMDCNRS-----------------------FRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDA 99 (207)
T ss_dssp CCHHHHTTSCSC-----------------------SCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHcCCCCC-----------------------CCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 368999999952 15789999999999999999999863 35689999999
Q ss_pred HHHhhccc
Q 000065 1575 YERLQATM 1582 (2462)
Q Consensus 1575 YEvLsd~~ 1582 (2462)
|++|+||.
T Consensus 100 Y~vLsdp~ 107 (207)
T 3bvo_A 100 YKTLLAPL 107 (207)
T ss_dssp HHHHHSHH
T ss_pred HHHHCCHH
Confidence 99999975
No 31
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=98.69 E-value=6.7e-09 Score=116.42 Aligned_cols=56 Identities=20% Similarity=0.452 Sum_probs=48.3
Q ss_pred HHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCc--------hHHHHHHHHHHH
Q 000065 1504 EACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPE--------GREKFLAVQKAY 1575 (2462)
Q Consensus 1504 ~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~--------a~ekF~~I~~AY 1575 (2462)
++|++||++++. +.|..+||++||+|+++|||||+++ +.++|..|++||
T Consensus 5 d~Y~iLgl~~~a-----------------------~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY 61 (174)
T 3hho_A 5 NYFELFGLPIQF-----------------------ELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAY 61 (174)
T ss_dssp CHHHHTTCCSSS-----------------------CCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHcCcCCCC-----------------------CCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 589999999521 3459999999999999999999864 457999999999
Q ss_pred HHhhccc
Q 000065 1576 ERLQATM 1582 (2462)
Q Consensus 1576 EvLsd~~ 1582 (2462)
++|+||.
T Consensus 62 ~vL~dp~ 68 (174)
T 3hho_A 62 QTLKDPL 68 (174)
T ss_dssp HHHHSHH
T ss_pred HHHcChH
Confidence 9999975
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=98.65 E-value=4e-09 Score=118.80 Aligned_cols=45 Identities=31% Similarity=0.629 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhhccc
Q 000065 1538 ENIDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQATM 1582 (2462)
Q Consensus 1538 ~~a~e~~IKkAYRkLa~k~HPDKnp~a~ekF~~I~~AYEvLsd~~ 1582 (2462)
.++|..+||++||+|+++|||||++++.++|+.|++||++|+||.
T Consensus 28 ~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~ 72 (181)
T 3uo3_A 28 WTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPL 72 (181)
T ss_dssp SCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHH
T ss_pred CCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChH
Confidence 378999999999999999999999988899999999999999975
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.49 E-value=1.7e-08 Score=136.22 Aligned_cols=69 Identities=30% Similarity=0.593 Sum_probs=37.4
Q ss_pred chHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCC---chHHHHHHHHHHHHH
Q 000065 1501 SEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNP---EGREKFLAVQKAYER 1577 (2462)
Q Consensus 1501 s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp---~a~ekF~~I~~AYEv 1577 (2462)
...++|++||+++ +++.++||+|||+|+++|||||++ ++.++|++|++||++
T Consensus 19 ~~~~~y~~lg~~~-------------------------~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~ 73 (780)
T 3apo_A 19 HDQNFYSLLGVSK-------------------------TASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEV 73 (780)
T ss_dssp ----CHHHHTCCT-------------------------TCCHHHHHHHHCC-----------------------CTHHHH
T ss_pred CCCCHHHHcCCCC-------------------------CCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHH
Confidence 4568999999994 789999999999999999999985 368899999999999
Q ss_pred hhccccCCCCCChhhHHhhhhhccccccccCCcC
Q 000065 1578 LQATMQGLQGPQPWRLLLLLKGQCILYRRYGDVL 1611 (2462)
Q Consensus 1578 Lsd~~~r~~~p~~~~~~liLr~qr~~Ydr~g~~l 1611 (2462)
|+|+. +|..||+||+..
T Consensus 74 L~~~~-----------------~r~~yd~~~~~~ 90 (780)
T 3apo_A 74 LKDED-----------------LRKKYDKYGEKG 90 (780)
T ss_dssp HHSHH-----------------HHHHHTTC----
T ss_pred HcChH-----------------HHHHHHhhcccc
Confidence 99965 677888888643
No 34
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.44 E-value=0.0002 Score=91.05 Aligned_cols=482 Identities=16% Similarity=0.084 Sum_probs=272.3
Q ss_pred eehhhhhhhhhhccChHHHHHHHhhcchHHHHHHhhccccchhHHHHHHHHHHHhhCCHHHHHHHHHhccHHHHHHHhhc
Q 000065 1698 IVTNVMRTFSVLSQFESARTEVLQFSGLVQDIVHCTELELVPGAVDAALQTIAHVSVSSELQDALLKAGALWFLLPLLLQ 1777 (2462)
Q Consensus 1698 v~~~~~r~~~v~a~F~~cr~~i~~~~~l~~di~~~l~l~~~~~l~~aALe~v~~~a~~~elq~~i~~~GVLw~LL~lLf~ 1777 (2462)
+..+++.++..++...+++..+...++.+..++.++.-...+.++..|+.++..++.+.+.+..+.+.|++-.|+.+|-.
T Consensus 33 v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~ 112 (529)
T 1jdh_A 33 VVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGS 112 (529)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcC
Confidence 34566777888888888888888888888888888765546788999999999999999999999999999999988843
Q ss_pred CCCcccccCccccccccccHHHHHHHHHHHHHHHHHHhhCcCCCCCCCCccHHHHHHH-HHhchHHHHHHhhccChHHHH
Q 000065 1778 YDSTAEKSDTNESHGVGASVQIAKNMHAVRAAQALSRLSGLCSNGISIPYNEAAASAL-RALLTPKLASLLKDQIPKNLL 1856 (2462)
Q Consensus 1778 yD~Tlees~le~~~~~~~~~qivkn~lAk~a~~aL~~L~g~~~d~~~~P~~~~v~~~L-~klLpP~l~~~L~d~~p~~~L 1856 (2462)
.| ... ...|+.+|..+... .+.+ +..+ ..=.-|.++..|.+.+
T Consensus 113 ~~-----------------~~v-----~~~a~~~L~~l~~~------~~~~---~~~i~~~g~i~~L~~ll~~~~----- 156 (529)
T 1jdh_A 113 PV-----------------DSV-----LFYAITTLHNLLLH------QEGA---KMAVRLAGGLQKMVALLNKTN----- 156 (529)
T ss_dssp SC-----------------HHH-----HHHHHHHHHHHHHH------CTTH---HHHHHHHTHHHHHHHGGGCCC-----
T ss_pred CC-----------------HHH-----HHHHHHHHHHHhcC------Ccch---HHHHHHcCCHHHHHHHHhcCC-----
Confidence 21 111 12255666665321 1111 2222 1222244455554321
Q ss_pred HHhhccCCCcccccchhhHHHHHHHHHHHHhccCCCCCcccccccccccccccCCcEEeeEEEeeeccCCCCCCCChHHH
Q 000065 1857 SKLNTNLESPEIIWNSSTRAELLKFVDQQRASQSPDGSYDLKDSNGFLYEALSKELYVGNVYLRVYNDQPDFEITEPEAF 1936 (2462)
Q Consensus 1857 ~~L~Sn~EnPeLIWnn~tRaeL~~~L~~q~~~~~~~~~w~l~~~~~f~Y~~l~~EL~VGGVYLRlfneqP~w~Lr~Pk~F 1936 (2462)
...|......+.... ..+++ .. .++.-. ..
T Consensus 157 ---------------~~~~~~~~~~L~~la-~~~~~----------~~-----~~i~~~-------------------~~ 186 (529)
T 1jdh_A 157 ---------------VKFLAITTDCLQILA-YGNQE----------SK-----LIILAS-------------------GG 186 (529)
T ss_dssp ---------------HHHHHHHHHHHHHHH-TTCHH----------HH-----HHHHHT-------------------TH
T ss_pred ---------------HHHHHHHHHHHHHHH-hCCHH----------HH-----HHHHHC-------------------CC
Confidence 223333322322111 00000 00 000000 01
Q ss_pred HHHHHHHHHHHhhcccCCCCccccccccccccchhhhccccCCCCCCccccCCCCcccCccccccccccccccccccccC
Q 000065 1937 CVALIDFISYLVHNQSATKSDVQGEESLDGLSSKIVQDKLSLDPSSSKTFELPSDATDSSMNERKVNDESLAVSDRKVTG 2016 (2462)
Q Consensus 1937 l~~LLdfl~~~~~~~~~~~~d~~~~~~~~~~~~~~~qd~~~~~~~~~~~~ev~~~~~~~~~~~~~l~~~s~~~s~~~~~~ 2016 (2462)
+..|++.+.. ..
T Consensus 187 i~~L~~ll~~----~~---------------------------------------------------------------- 198 (529)
T 1jdh_A 187 PQALVNIMRT----YT---------------------------------------------------------------- 198 (529)
T ss_dssp HHHHHHHHHH----CC----------------------------------------------------------------
T ss_pred HHHHHHHHHh----CC----------------------------------------------------------------
Confidence 2222222211 00
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcc
Q 000065 2017 KEDSVMIKNLQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGS 2096 (2462)
Q Consensus 2017 ~~d~e~l~~l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~ 2096 (2462)
+... ...+..+|.++- .+|.....+...+.++.|..++... +..++..++.+|..++......+. ...
T Consensus 199 --~~~~---~~~a~~~L~~l~-~~~~~~~~~~~~g~~~~L~~ll~~~---~~~~~~~a~~~L~~l~~~~~~~~~---~~~ 266 (529)
T 1jdh_A 199 --YEKL---LWTTSRVLKVLS-VCSSNKPAIVEAGGMQALGLHLTDP---SQRLVQNCLWTLRNLSDAATKQEG---MEG 266 (529)
T ss_dssp --CHHH---HHHHHHHHHHHT-TSTTHHHHHHHTTHHHHHHTTTTSS---CHHHHHHHHHHHHHHHTTCTTCSC---CHH
T ss_pred --hHHH---HHHHHHHHHHHh-cCcccHHHHHHCCCHHHHHHHHhCC---ChHHHHHHHHHHHHHhcCChhhHH---HHh
Confidence 0011 223455555554 3566666666667788888888653 456788889999888866543221 124
Q ss_pred hHHHHHHHHhh-CcchHHHHHHHHHHhhcc-hHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCC
Q 000065 2097 SLLLLLQMLHY-APACREGVLHVLYALAST-PELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHG 2174 (2462)
Q Consensus 2097 vl~~Ll~lL~~-~p~~~~~~L~~L~aL~s~-t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhG 2174 (2462)
+++.|+.+++. .++.+..+..+|..|+.+ ++..+...+.||+..|+++|... ..++.+|..++.+|+.+..+.-..
T Consensus 267 ~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~L~~ll~~~--~~~~~v~~~a~~~L~nl~~~~~~~ 344 (529)
T 1jdh_A 267 LLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA--GDREDITEPAICALRHLTSRHQEA 344 (529)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHTSSSTTH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCChHHHHHHHHcc--CCHHHHHHHHHHHHHHHHcCCchH
Confidence 67788888864 456667788889888875 45777788899999999999752 124789999999999997642222
Q ss_pred hHHHHHHHhhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCcccc
Q 000065 2175 PRVAITLARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDLYREQMKGRVVDWDVPEQAS 2254 (2462)
Q Consensus 2175 PrV~~~L~KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~ 2254 (2462)
+..+..+.. .+.-...+.++.+.. +.+.|......+.+++.. +... ..+.
T Consensus 345 ~~~~~~i~~-----------~~~i~~L~~lL~~~~-------~~~v~~~a~~~l~nl~~~--------~~~~----~~~~ 394 (529)
T 1jdh_A 345 EMAQNAVRL-----------HYGLPVVVKLLHPPS-------HWPLIKATVGLIRNLALC--------PANH----APLR 394 (529)
T ss_dssp HHHHHHHHH-----------TTCHHHHHHTTSTTC-------CHHHHHHHHHHHHHHTTS--------GGGH----HHHH
T ss_pred HHHHHHHHH-----------cCChhHHHHHhcccc-------chHHHHHHHHHHHHHhcC--------hhhh----HHHH
Confidence 223322221 111122233333221 124444444444444310 0000 0000
Q ss_pred ccccCCCCcEEee--eeehhh-------ccCCCCCCCChHHHHHHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHH
Q 000065 2255 AQQEMRDEPQVGG--IYVRLF-------LKDPKFPLRNPKRFLEGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLL 2325 (2462)
Q Consensus 2255 ~y~~l~~El~VGG--VYlRLF-------l~nP~w~LR~PK~FL~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL 2325 (2462)
+ + |+ ..+.++ -+.-.|.+.|-. +. .+..+.++...+..|+..|.
T Consensus 395 --~----~---~~i~~L~~ll~~~~~~v~~~a~~~l~n~~-------------~~-----~~~~~~~i~~~~~~al~~L~ 447 (529)
T 1jdh_A 395 --E----Q---GAIPRLVQLLVRAHQDTQRRTSMGGTQQQ-------------FV-----EGVRMEEIVEGCTGALHILA 447 (529)
T ss_dssp --H----T---THHHHHHHHHHHHHHHHC------------------------CB-----TTBCHHHHHHHHHHHHHHHT
T ss_pred --H----c---CCHHHHHHHHHHHhHHHHHHHhcccCchh-------------hh-----ccccHHHHHHHHHHHHHHHh
Confidence 0 0 00 000000 001112221100 00 01111223344566777776
Q ss_pred hcCchhhhhhccCCChHHHHHHHHhhccccccchhhhhcCCccccccccCCCCCCCCCCChhhHhhhhHHHHHHHhhCCh
Q 000065 2326 RVHPALADHVGYLGYVPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAAST 2405 (2462)
Q Consensus 2326 ~~qp~LaD~vp~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~s~ 2405 (2462)
+ .+.....+...|.+|.|+.+|.+.+ +.++..+...|..|+...
T Consensus 448 ~-~~~~~~~l~~~~~v~~l~~ll~~~~-----------------------------------~~v~~~a~~~l~~l~~~~ 491 (529)
T 1jdh_A 448 R-DVHNRIVIRGLNTIPLFVQLLYSPI-----------------------------------ENIQRVAAGVLCELAQDK 491 (529)
T ss_dssp T-SHHHHHHHHHTTCHHHHHHGGGCSC-----------------------------------HHHHHHHHHHHHHHTTSH
T ss_pred c-CchHHHHHhccCCccHHHHHHcCCc-----------------------------------hHHHHHHHHHHHHHhcCH
Confidence 6 4666677888999999999877532 367889999999999888
Q ss_pred hHHHHhhhccCCCCcchHHHHHHhccCCcch--hHHHHHHHH
Q 000065 2406 TCAEAMAATSTGTPQVVPILMKAIGWQGGSI--LALETLKRV 2445 (2462)
Q Consensus 2406 ~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~--~a~etl~r~ 2445 (2462)
...+.+.+.+. ++.|.+-+......+ .|+.+|.|+
T Consensus 492 ~~~~~i~~~~~-----~~~L~~l~~~~~~~v~~~a~~aL~~l 528 (529)
T 1jdh_A 492 EAAEAIEAEGA-----TAPLTELLHSRNEGVATYAAAVLFRM 528 (529)
T ss_dssp HHHHHHHHTTC-----HHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-----hHHHHHHhcCCCHHHHHHHHHHHHhc
Confidence 88888888777 999999887754444 788888875
No 35
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.37 E-value=0.00019 Score=97.30 Aligned_cols=509 Identities=17% Similarity=0.093 Sum_probs=284.7
Q ss_pred HhcCHHHHHHHHHHhhhcccCCCCCCCccceeehhhhhhhhhhccChHHHHHHHhhcchHHHHHHhhccccchhHHHHHH
Q 000065 1667 RDGGIQLLSTLLSRCMCVVQKTTPAMEPSAVIVTNVMRTFSVLSQFESARTEVLQFSGLVQDIVHCTELELVPGAVDAAL 1746 (2462)
Q Consensus 1667 re~G~~~L~~~l~rC~~vl~~~s~~~~~~~~v~~~~~r~~~v~a~F~~cr~~i~~~~~l~~di~~~l~l~~~~~l~~aAL 1746 (2462)
..|+++.|..++.. . ...|-.+++.++..++....++..+...++.+..++..|.-...+.++..|+
T Consensus 148 ~~g~ip~Lv~lL~~-----------~--d~~vr~~A~~~L~~L~~~~~~~~~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa 214 (780)
T 2z6g_A 148 ATRAIPELTKLLND-----------E--DQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTS 214 (780)
T ss_dssp HHHHHHHHHHHHHC-----------S--CHHHHHHHHHHHHHHHTSHHHHHHHTTCHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HhCCHHHHHHHHCC-----------C--CHHHHHHHHHHHHHHhCCChhHHHHHhccChHHHHHHHHcCCCCHHHHHHHH
Confidence 36777777776651 1 1234457788888888888888888888888888888886555678899999
Q ss_pred HHHHHhhCCHHHHHHHHHhccHHHHHHHhhcCCCcccccCccccccccccHHHHHHHHHHHHHHHHHHhhCcCCCCCCCC
Q 000065 1747 QTIAHVSVSSELQDALLKAGALWFLLPLLLQYDSTAEKSDTNESHGVGASVQIAKNMHAVRAAQALSRLSGLCSNGISIP 1826 (2462)
Q Consensus 1747 e~v~~~a~~~elq~~i~~~GVLw~LL~lLf~yD~Tlees~le~~~~~~~~~qivkn~lAk~a~~aL~~L~g~~~d~~~~P 1826 (2462)
.++..++.+.+.+..+.+.|++-.|+.+|-..+ ... -..|+.+|..|.... +
T Consensus 215 ~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~~-----------------~~v-----~~~A~~aL~nLa~~~------~ 266 (780)
T 2z6g_A 215 GTLHNLSHHREGLLAIFKSGGIPALVNMLGSPV-----------------DSV-----LFHAITTLHNLLLHQ------E 266 (780)
T ss_dssp HHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCSC-----------------HHH-----HHHHHHHHHHHHHHS------T
T ss_pred HHHHHHhCCchhHHHHHHcCCHHHHHHHHcCCC-----------------HHH-----HHHHHHHHHHHhCCC------h
Confidence 999999999999999999999998888874311 111 223556666663211 1
Q ss_pred ccHHHHHHH-HHhchHHHHHHhhccChHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhccCCCCCccccccccccc
Q 000065 1827 YNEAAASAL-RALLTPKLASLLKDQIPKNLLSKLNTNLESPEIIWNSSTRAELLKFVDQQRASQSPDGSYDLKDSNGFLY 1905 (2462)
Q Consensus 1827 ~~~~v~~~L-~klLpP~l~~~L~d~~p~~~L~~L~Sn~EnPeLIWnn~tRaeL~~~L~~q~~~~~~~~~w~l~~~~~f~Y 1905 (2462)
. .+..+ ..=.-|.++..|.+.+ ...|....+.+.... ..+++
T Consensus 267 ~---~~~~v~~~g~v~~Lv~lL~~~~--------------------~~v~~~a~~aL~~La-~~~~e------------- 309 (780)
T 2z6g_A 267 G---AKMAVRLAGGLQKMVALLNKTN--------------------VKFLAITTDCLQILA-YGNQE------------- 309 (780)
T ss_dssp T---HHHHHHHTTHHHHHHHGGGCCC--------------------HHHHHHHHHHHHHHH-TTCHH-------------
T ss_pred h---hHHHHHHcCCHHHHHHHHhcCC--------------------HHHHHHHHHHHHHHh-cCChH-------------
Confidence 1 12222 1112244444444321 223333333332111 00000
Q ss_pred ccccCCcEEeeEEEeeeccCCCCCCCChHHHHHHHHHHHHHHhhcccCCCCccccccccccccchhhhccccCCCCCCcc
Q 000065 1906 EALSKELYVGNVYLRVYNDQPDFEITEPEAFCVALIDFISYLVHNQSATKSDVQGEESLDGLSSKIVQDKLSLDPSSSKT 1985 (2462)
Q Consensus 1906 ~~l~~EL~VGGVYLRlfneqP~w~Lr~Pk~Fl~~LLdfl~~~~~~~~~~~~d~~~~~~~~~~~~~~~qd~~~~~~~~~~~ 1985 (2462)
.+.++ . +. ..+..|+..+ ....
T Consensus 310 --~~~~i----------~--------~~-~~i~~Lv~lL----~~~~--------------------------------- 331 (780)
T 2z6g_A 310 --SKLII----------L--------AS-GGPQALVNIM----RTYT--------------------------------- 331 (780)
T ss_dssp --HHHHH----------H--------TT-THHHHHHHHH----TTCC---------------------------------
T ss_pred --HHHHH----------H--------Hc-CCHHHHHHHH----hcCC---------------------------------
Confidence 00000 0 00 0122222222 1100
Q ss_pred ccCCCCcccCccccccccccccccccccccCcchHHHHHHHHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCC
Q 000065 1986 FELPSDATDSSMNERKVNDESLAVSDRKVTGKEDSVMIKNLQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFA 2065 (2462)
Q Consensus 1986 ~ev~~~~~~~~~~~~~l~~~s~~~s~~~~~~~~d~e~l~~l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~ 2065 (2462)
+... ...+..+|.++-. ++.....+...+.++.|..+|...
T Consensus 332 ---------------------------------~~~~---~~~a~~aL~~Ls~-~~~~~~~i~~~g~l~~Ll~lL~~~-- 372 (780)
T 2z6g_A 332 ---------------------------------YEKL---LWTTSRVLKVLSV-CSSNKPAIVEAGGMQALGLHLTDP-- 372 (780)
T ss_dssp ---------------------------------CHHH---HHHHHHHHHHHHT-STTHHHHHHHTTHHHHHGGGTTCS--
T ss_pred ---------------------------------HHHH---HHHHHHHHHHhhc-ChHHHHHHHHhchHHHHHHHHcCC--
Confidence 0001 2234455555543 455555555566778888888643
Q ss_pred CCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHHhh-CcchHHHHHHHHHHhhcch-HHHHHHHHcCCHhhhHH
Q 000065 2066 PDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQMLHY-APACREGVLHVLYALASTP-ELAWAAAKHGGVVYILE 2143 (2462)
Q Consensus 2066 ~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL~~-~p~~~~~~L~~L~aL~s~t-~lvkqal~~GgvlyLL~ 2143 (2462)
+..+...|+.+|..++.+...... ...++..|+.+|+. .++.+..++.+|..|+..+ +..+..++.||+..|++
T Consensus 373 -~~~~~~~a~~~L~~L~~~~~~~~~---~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~ 448 (780)
T 2z6g_A 373 -SQRLVQNCLWTLRNLSDAATKQEG---MEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVR 448 (780)
T ss_dssp -CHHHHHHHHHHHHHHHTTCTTCSC---CHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHHHHHH
T ss_pred -chHHHHHHHHHHHHHhccchhhhh---hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHH
Confidence 456788888888888765533211 12467778888864 4556677888888888754 56666778899999999
Q ss_pred hhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHH--HHHHhhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHH
Q 000065 2144 LLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVA--ITLARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMA 2221 (2462)
Q Consensus 2144 LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~--~~L~KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR 2221 (2462)
+|... .....+|..++..|+.+..+.......+ ..-...+ + ..+.++.+.+ ..+.|
T Consensus 449 lL~~~--~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l-~------------~L~~lL~~~~-------~~~v~ 506 (780)
T 2z6g_A 449 TVLRA--GDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGL-P------------VVVKLLHPPS-------HWPLI 506 (780)
T ss_dssp HHHHH--TTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCH-H------------HHHHTTSTTC-------CHHHH
T ss_pred HHHcc--CCHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCH-H------------HHHHHhcCCC-------hHHHH
Confidence 98642 1235899999999999975421111111 1111111 2 2333333221 12556
Q ss_pred HHHHHHHHHHHHHHHHHH-hcCCcccccCCccccccccCCCCcEEeeeeehhhccCCCCCCCChHHHHHHHHHHHHHHHh
Q 000065 2222 ASLSAQISTMASDLYREQ-MKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIA 2300 (2462)
Q Consensus 2222 ~~v~~~i~~~~~~~~~~Q-~~~~~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~nP~w~LR~PK~FL~~Ll~~~~~~~~ 2300 (2462)
...+..|.+++..--..+ ..+.. -+|.-... +.+ +..-+ -+.-.|.+-|
T Consensus 507 ~~A~~aL~nLa~~~~~~~~i~~~g---~i~~Lv~l---L~~----~~~~~---~~~aa~al~n----------------- 556 (780)
T 2z6g_A 507 KATVGLIRNLALCPANHAPLREQG---AIPRLVQL---LVR----AHQDT---QRRTSMGGTQ----------------- 556 (780)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHHTT---HHHHHHHH---HHH----HHHHH---HHTTC----------------------
T ss_pred HHHHHHHHHHhcCHHHHHHHHHCC---CHHHHHHH---HHh----cchhH---HHHHhhcccc-----------------
Confidence 666666665542100000 00000 00000000 000 00000 0011111111
Q ss_pred ccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCChHHHHHHHHhhccccccchhhhhcCCccccccccCCCCCC
Q 000065 2301 ATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSA 2380 (2462)
Q Consensus 2301 ~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2380 (2462)
.. .-.+..+.++.+-+..|+..|. ..+.....+...|.+|.|+.+|.+.+
T Consensus 557 q~-~~~~~~~~~v~~~a~~aL~~La-~~~~~~~~l~~~~~i~~Lv~lL~~~~---------------------------- 606 (780)
T 2z6g_A 557 QQ-FVEGVRMEEIVEACTGALHILA-RDIHNRIVIRGLNTIPLFVQLLYSPI---------------------------- 606 (780)
T ss_dssp -C-CSTTCCHHHHHHHHHHHHHHHT-TSHHHHHHHHHTCCHHHHHHGGGCSC----------------------------
T ss_pred ch-hhcccChHHHHHHHHHHHHHHh-cChhhHHHHHHCCcHHHHHHHHcCCC----------------------------
Confidence 00 0001111223344555666554 45667777888999999999987532
Q ss_pred CCCCChhhHhhhhHHHHHHHhhCChhHHHHhhhccCCCCcchHHHHHHhccCCcch--hHHHHHHHHHhc
Q 000065 2381 QPVQTPQERVRLSCLRVLHQLAASTTCAEAMAATSTGTPQVVPILMKAIGWQGGSI--LALETLKRVVVA 2448 (2462)
Q Consensus 2381 ~~~~~~~~~~~~s~l~vLh~Ls~s~~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~--~a~etl~r~~~~ 2448 (2462)
+.++..|...|..|+.+....+.|.+.++ +++|++.++.....+ .|+.+|+++...
T Consensus 607 -------~~v~~~a~~aL~~L~~~~~~~~~i~~~g~-----i~~L~~Ll~~~~~~Vr~~A~~aL~~l~~~ 664 (780)
T 2z6g_A 607 -------ENIQRVAAGVLCELAQDKEAAEAIEAEGA-----TAPLTELLHSRNEGVATYAAAVLFRMSED 664 (780)
T ss_dssp -------HHHHHHHHHHHHHHHTSHHHHHHHHHTTC-----HHHHHHGGGCSCHHHHHHHHHHHHHHHTT
T ss_pred -------HHHHHHHHHHHHHHhcCHHHHHHHHHCCC-----HHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 36888999999999999888999998888 999999988754444 899999998874
No 36
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.32 E-value=0.00042 Score=91.52 Aligned_cols=502 Identities=17% Similarity=0.082 Sum_probs=283.9
Q ss_pred HhcCHHHHHHHHHHhhhcccCCCCCCCccceeehhhhhhhhhhccChHHHHHHHhhcchHHHHHHhhccccchhHHHHHH
Q 000065 1667 RDGGIQLLSTLLSRCMCVVQKTTPAMEPSAVIVTNVMRTFSVLSQFESARTEVLQFSGLVQDIVHCTELELVPGAVDAAL 1746 (2462)
Q Consensus 1667 re~G~~~L~~~l~rC~~vl~~~s~~~~~~~~v~~~~~r~~~v~a~F~~cr~~i~~~~~l~~di~~~l~l~~~~~l~~aAL 1746 (2462)
..|+++.|..++.. . ...|-.+++.++..++....++..+...++.+..++..|.-...+.++..|+
T Consensus 12 ~~g~i~~Lv~lL~~-----------~--~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~ 78 (644)
T 2z6h_A 12 ATRAIPELTKLLND-----------E--DQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTA 78 (644)
T ss_dssp CTTTHHHHHHHHTC-----------S--CHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred hhchHHHHHHHHcC-----------C--CHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHH
Confidence 34566666665541 1 1234457777888888888899888888888888888887555678999999
Q ss_pred HHHHHhhCCHHHHHHHHHhccHHHHHHHhhcCCCcccccCccccccccccHHHHHHHHHHHHHHHHHHhhCcCCCCCCCC
Q 000065 1747 QTIAHVSVSSELQDALLKAGALWFLLPLLLQYDSTAEKSDTNESHGVGASVQIAKNMHAVRAAQALSRLSGLCSNGISIP 1826 (2462)
Q Consensus 1747 e~v~~~a~~~elq~~i~~~GVLw~LL~lLf~yD~Tlees~le~~~~~~~~~qivkn~lAk~a~~aL~~L~g~~~d~~~~P 1826 (2462)
.++..++.+.+.+..+.+.|++-.|+.+|-..| ... ...|+.+|..|.... +
T Consensus 79 ~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~-----------------~~v-----~~~A~~aL~nL~~~~------~ 130 (644)
T 2z6h_A 79 GTLHNLSHHREGLLAIFKSGGIPALVKMLGSPV-----------------DSV-----LFYAITTLHNLLLHQ------E 130 (644)
T ss_dssp HHHHHHTTSHHHHHHHHTTTHHHHHHHHTTCSS-----------------HHH-----HHHHHHHHHHHHHHS------T
T ss_pred HHHHHHhcChhhHHHHHHcCCHHHHHHHHhCCC-----------------HHH-----HHHHHHHHHHHHhCc------c
Confidence 999999999999999999999999988874321 111 122556666653211 1
Q ss_pred ccHHHHHHHHHhchHHHHHHhhccChHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhccCCCCCcccccccccccc
Q 000065 1827 YNEAAASALRALLTPKLASLLKDQIPKNLLSKLNTNLESPEIIWNSSTRAELLKFVDQQRASQSPDGSYDLKDSNGFLYE 1906 (2462)
Q Consensus 1827 ~~~~v~~~L~klLpP~l~~~L~d~~p~~~L~~L~Sn~EnPeLIWnn~tRaeL~~~L~~q~~~~~~~~~w~l~~~~~f~Y~ 1906 (2462)
.. .......=.-|.++..|.+. + ...+......|..... .+++ .+
T Consensus 131 ~~--~~~v~~~g~i~~Lv~lL~~~--------------~------~~~~~~a~~~L~~La~-~~~~----------~~-- 175 (644)
T 2z6h_A 131 GA--KMAVRLAGGLQKMVALLNKT--------------N------VKFLAITTDCLQILAY-GNQE----------SK-- 175 (644)
T ss_dssp TH--HHHHHHTTHHHHHHHGGGCC--------------C------HHHHHHHHHHHHHHHT-TCHH----------HH--
T ss_pred hh--HHHHHHCCChHHHHHHHCcC--------------C------HHHHHHHHHHHHHHHh-cCcH----------HH--
Confidence 11 11111111223444444432 1 1233332233322110 0000 00
Q ss_pred cccCCcEEeeEEEeeeccCCCCCCCChHHHH-HHHHHHHHHHhhcccCCCCccccccccccccchhhhccccCCCCCCcc
Q 000065 1907 ALSKELYVGNVYLRVYNDQPDFEITEPEAFC-VALIDFISYLVHNQSATKSDVQGEESLDGLSSKIVQDKLSLDPSSSKT 1985 (2462)
Q Consensus 1907 ~l~~EL~VGGVYLRlfneqP~w~Lr~Pk~Fl-~~LLdfl~~~~~~~~~~~~d~~~~~~~~~~~~~~~qd~~~~~~~~~~~ 1985 (2462)
+.+. ...++.+..+++...
T Consensus 176 ---------------------------~~i~~~g~v~~Lv~lL~~~~--------------------------------- 195 (644)
T 2z6h_A 176 ---------------------------LIILASGGPQALVNIMRTYT--------------------------------- 195 (644)
T ss_dssp ---------------------------HHHHHTTHHHHHHHHHTTCC---------------------------------
T ss_pred ---------------------------HHHHHcCChHHHHHHHHcCC---------------------------------
Confidence 0000 001222222221100
Q ss_pred ccCCCCcccCccccccccccccccccccccCcchHHHHHHHHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCC
Q 000065 1986 FELPSDATDSSMNERKVNDESLAVSDRKVTGKEDSVMIKNLQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFA 2065 (2462)
Q Consensus 1986 ~ev~~~~~~~~~~~~~l~~~s~~~s~~~~~~~~d~e~l~~l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~ 2065 (2462)
+... ...++.+|.|+- .++.....+...+.++.|..++...
T Consensus 196 ---------------------------------~~~~---~~~a~~~L~nLs-~~~~~~~~l~~~g~l~~L~~ll~~~-- 236 (644)
T 2z6h_A 196 ---------------------------------YEKL---LWTTSRVLKVLS-VCSSNKPAIVEAGGMQALGLHLTDP-- 236 (644)
T ss_dssp ---------------------------------CHHH---HHHHHHHHHHHT-TCTTHHHHHHHTTHHHHHHTTTTCS--
T ss_pred ---------------------------------hHHH---HHHHHHHHHHHh-cCcccHHHHHHCCCHHHHHHHHhcC--
Confidence 0011 234566666665 4666666666677788888888653
Q ss_pred CCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHHhh-CcchHHHHHHHHHHhhcc-hHHHHHHHHcCCHhhhHH
Q 000065 2066 PDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQMLHY-APACREGVLHVLYALAST-PELAWAAAKHGGVVYILE 2143 (2462)
Q Consensus 2066 ~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL~~-~p~~~~~~L~~L~aL~s~-t~lvkqal~~GgvlyLL~ 2143 (2462)
+..++..++.+|..++.+....+.+ ..++..|+.+|+. .++.+..+..+|..|+.. ++..+...+.|++..|+.
T Consensus 237 -~~~~~~~a~~~L~nL~~~~~~~~~~---~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~~~~~~v~~~g~v~~Lv~ 312 (644)
T 2z6h_A 237 -SQRLVQNCLWTLRNLSDAATKQEGM---EGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVR 312 (644)
T ss_dssp -CHHHHHHHHHHHHHHGGGCTTCCSC---HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHhhcchhhhhh---hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHH
Confidence 4578889999998888655432211 2467778888874 345566688888888875 466677788899999999
Q ss_pred hhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHH--HhhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHH
Q 000065 2144 LLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITL--ARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMA 2221 (2462)
Q Consensus 2144 LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L--~KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR 2221 (2462)
+|.... ....+|..++..|+.+....-.-...+..+ ...+ ...+.++.+.. +.+.|
T Consensus 313 lL~~~~--~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l-------------~~L~~lL~~~~-------~~~v~ 370 (644)
T 2z6h_A 313 TVLRAG--DREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGL-------------PVVVKLLHPPS-------HWPLI 370 (644)
T ss_dssp HHHHHT--TCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHH-------------HHHHHTTSTTC-------CHHHH
T ss_pred HHHccC--CcHHHHHHHHHHHHHHhcCCchHHHHHHHHHHccCh-------------HHHHHHhCccC-------chHHH
Confidence 987521 236899999999999976411111222211 1222 12333343221 12445
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccCCccccccccCCCCcEEeeeeehhhccCCCCCCCChHHHHHHHHHHHHHHHhc
Q 000065 2222 ASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIAA 2301 (2462)
Q Consensus 2222 ~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~nP~w~LR~PK~FL~~Ll~~~~~~~~~ 2301 (2462)
......+.+++. ++ ++. . .++ +.+ =-..|..+|..--..+.+
T Consensus 371 ~~a~~~L~nLa~--------~~-------~~~---~--------------~i~-~~~-----~i~~Lv~lL~~~~~~vr~ 412 (644)
T 2z6h_A 371 KATVGLIRNLAL--------CP-------ANH---A--------------PLR-EQG-----AIPRLVQLLVRAHQDTQR 412 (644)
T ss_dssp HHHHHHHHHHTT--------SG-------GGH---H--------------HHH-HTT-----HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcc--------CH-------HHH---H--------------HHH-HcC-----CHHHHHHHHhccchhhhh
Confidence 555555544431 00 000 0 000 000 000111111110000000
Q ss_pred c------C--CCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCChHHHHHHHHhhccccccchhhhhcCCccccccc
Q 000065 2302 T------H--YDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKLVAAVAYEGRRETMSTEEVKNGNSEADRTY 2373 (2462)
Q Consensus 2302 ~------~--~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 2373 (2462)
. . .-.+..+.++.+-...|+..|.+ .+.....+...|.+|.|+.+|...+
T Consensus 413 ~a~~al~n~~~~~~~~~~~v~~~a~~aL~~La~-~~~~~~~l~~~~~i~~Lv~lL~~~~--------------------- 470 (644)
T 2z6h_A 413 RTSMGGTQQQFVEGVRMEEIVEGCTGALHILAR-DVHNRIVIRGLNTIPLFVQLLYSPI--------------------- 470 (644)
T ss_dssp C----------CCSSCHHHHHHHHHHHHHHHTT-SHHHHHHHHHTTCHHHHHHHTTCSC---------------------
T ss_pred HhhhccccchhcccccHHHHHHHHHHHHHHHhc-CHHHHHHHHhCCcHHHHHHHHcCCC---------------------
Confidence 0 0 00011123344455667776665 4577788889999999999986421
Q ss_pred cCCCCCCCCCCChhhHhhhhHHHHHHHhhCChhHHHHhhhccCCCCcchHHHHHHhccCCcch--hHHHHHHHHHhc
Q 000065 2374 ESDDGSAQPVQTPQERVRLSCLRVLHQLAASTTCAEAMAATSTGTPQVVPILMKAIGWQGGSI--LALETLKRVVVA 2448 (2462)
Q Consensus 2374 ~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~s~~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~--~a~etl~r~~~~ 2448 (2462)
+.+++.|..+|..|+......+.+.+... ++.|.+.+......+ .|+.+|.++...
T Consensus 471 --------------~~v~~~a~~aL~~l~~~~~~~~~i~~~g~-----l~~L~~ll~~~~~~vr~~A~~aL~~l~~~ 528 (644)
T 2z6h_A 471 --------------ENIQRVAAGVLCELAQDKEAAEAIEAEGA-----TAPLTELLHSRNEGVATYAAAVLFRMSED 528 (644)
T ss_dssp --------------HHHHHHHHHHHHHHHTSHHHHHHHHHTTC-----HHHHHHHTTCSCHHHHHHHHHHHHHHTTT
T ss_pred --------------HHHHHHHHHHHHHHHcCHHHHHHHHHcCC-----hhHHHHHHcCCCHHHHHHHHHHHHHHhcc
Confidence 35788999999999988888888887776 888998887654334 778888777654
No 37
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.22 E-value=1.2e-06 Score=83.07 Aligned_cols=58 Identities=24% Similarity=0.330 Sum_probs=48.9
Q ss_pred CchHHHHHHhcCCccCCCCCCccccccchhhcccccccCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhh
Q 000065 1500 LSEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQ 1579 (2462)
Q Consensus 1500 ~s~~~ay~iLgi~~~~~~~~~~~~~~~~~~~~~~sk~~~~a~e~~IKkAYRkLa~k~HPDKnp~a~ekF~~I~~AYEvLs 1579 (2462)
|+.+|||+||||++++ ..++.++||++||+|...+||||+. .......|++|+|+|.
T Consensus 1 mt~~EA~~ILgv~~~~----------------------~~a~~~~Ik~~yr~Lm~~nhPDkGG-S~yl~~ki~~Ake~l~ 57 (65)
T 2guz_B 1 MTLDESCKILNIEESK----------------------GDLNMDKINNRFNYLFEVNDKEKGG-SFYLQSKVYRAAERLK 57 (65)
T ss_dssp CCHHHHHHHTTCCGGG----------------------TCCSHHHHHHHHHHHHHHTCGGGTC-CHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCCCc----------------------CcCCHHHHHHHHHHHHHHhCCCCCC-CHHHHHHHHHHHHHHH
Confidence 5789999999999521 0378899999999999999999964 4667889999999997
Q ss_pred c
Q 000065 1580 A 1580 (2462)
Q Consensus 1580 d 1580 (2462)
.
T Consensus 58 ~ 58 (65)
T 2guz_B 58 W 58 (65)
T ss_dssp H
T ss_pred H
Confidence 5
No 38
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.18 E-value=8.6e-05 Score=92.17 Aligned_cols=303 Identities=11% Similarity=0.104 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHh--hCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcC-ChhHHHHHHhhcchHHHHH
Q 000065 2026 LQFGLTSLQNILT--SNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTT-CASCLEAMVADGSSLLLLL 2102 (2462)
Q Consensus 2026 l~maL~AL~nLL~--~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~-n~~CVeaiA~~~~vl~~Ll 2102 (2462)
...++.+|+.++. .+|.....+...+.++.|..+|... .+..++..++.+|..++. +.+....+...+ ++..|+
T Consensus 37 r~~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~L~~~--~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~-~i~~L~ 113 (450)
T 2jdq_A 37 QLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRK--ENCTLQFESAWVLTNIASGNSLQTRIVIQAG-AVPIFI 113 (450)
T ss_dssp HHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHTCT--TCHHHHHHHHHHHHHHHSSCHHHHHHHHHTT-HHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHHHCCC--CCHHHHHHHHHHHHHHhcCCHHHHHHHHhCC-CHHHHH
Confidence 4578889999886 4665544333336788888888653 245789999999988876 456666666544 788899
Q ss_pred HHHhh-CcchHHHHHHHHHHhhcch-HHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHH
Q 000065 2103 QMLHY-APACREGVLHVLYALASTP-ELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAIT 2180 (2462)
Q Consensus 2103 ~lL~~-~p~~~~~~L~~L~aL~s~t-~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~ 2180 (2462)
.+|.+ .++.+..++.+|..++... +.....+..|++..|+.++.++ .+..+|..++..|+.+..+.-..++...
T Consensus 114 ~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~---~~~~v~~~a~~~L~~l~~~~~~~~~~~~- 189 (450)
T 2jdq_A 114 ELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQ---NRLTMTRNAVWALSNLCRGKSPPPEFAK- 189 (450)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSC---CCHHHHHHHHHHHHHHHCCSSSCCCGGG-
T ss_pred HHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCC---CCHHHHHHHHHHHHHHhCCCCCCCCHHH-
Confidence 88875 4566777999999999754 5666667889999999999742 3688999999999999975311111111
Q ss_pred HHhhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCccccccccCC
Q 000065 2181 LARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMR 2260 (2462)
Q Consensus 2181 L~KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y~~l~ 2260 (2462)
...++| .++..+++. +++.|......+..++.. . ++.
T Consensus 190 ~~~~l~-~L~~~l~~~--------------------~~~v~~~a~~~L~~l~~~--------~------~~~-------- 226 (450)
T 2jdq_A 190 VSPCLN-VLSWLLFVS--------------------DTDVLADACWALSYLSDG--------P------NDK-------- 226 (450)
T ss_dssp TGGGHH-HHHHHTTCC--------------------CHHHHHHHHHHHHHHTSS--------S------HHH--------
T ss_pred HHHHHH-HHHHHHccC--------------------CHHHHHHHHHHHHHHHCC--------C------cHH--------
Confidence 122332 233333321 234555655555554321 0 000
Q ss_pred CCcEEeeeeehhhccCCCCCCCChHHHH-HHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCC
Q 000065 2261 DEPQVGGIYVRLFLKDPKFPLRNPKRFL-EGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLG 2339 (2462)
Q Consensus 2261 ~El~VGGVYlRLFl~nP~w~LR~PK~FL-~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG 2339 (2462)
.+.+. .+++..++..+... |.++..-...++..|....+.....+...|
T Consensus 227 -----------------------~~~~~~~~~i~~L~~ll~~~-------~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 276 (450)
T 2jdq_A 227 -----------------------IQAVIDAGVCRRLVELLMHN-------DYKVVSPALRAVGNIVTGDDIQTQVILNCS 276 (450)
T ss_dssp -----------------------HHHHHHTTTHHHHHHHTTCS-------CHHHHHHHHHHHHHHTTSCHHHHHHHHTTT
T ss_pred -----------------------HHHHHHcCcHHHHHHHHCCC-------chhHHHHHHHHHHHHhhCChHHHHHHHHCc
Confidence 01111 13455556655431 233445556677777777777777777889
Q ss_pred ChHHHHHHHHhhccccccchhhhhcCCccccccccCCCCCCCCCCChhhHhhhhHHHHHHHhhC-ChhHHHHhhhccCCC
Q 000065 2340 YVPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAA-STTCAEAMAATSTGT 2418 (2462)
Q Consensus 2340 ~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~-s~~Cv~ala~~~~~~ 2418 (2462)
.+|.|+..|.+.+ +.+|+.|+..|..|+. +....+.+.+...
T Consensus 277 ~l~~L~~ll~~~~-----------------------------------~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~-- 319 (450)
T 2jdq_A 277 ALQSLLHLLSSPK-----------------------------------ESIKKEACWTISNITAGNRAQIQTVIDANI-- 319 (450)
T ss_dssp HHHHHHHHTTCSS-----------------------------------HHHHHHHHHHHHHHTTSCHHHHHHHHHTTH--
T ss_pred cHHHHHHHHcCCC-----------------------------------HHHHHHHHHHHHHHHcCCHHHHHHHHHCCC--
Confidence 9999999977531 3688999999999995 6666676665444
Q ss_pred CcchHHHHHHhccCCcch--hHHHHHHHHHhc
Q 000065 2419 PQVVPILMKAIGWQGGSI--LALETLKRVVVA 2448 (2462)
Q Consensus 2419 ~~~v~~l~~a~~~~~~~~--~a~etl~r~~~~ 2448 (2462)
+|.|++.++.....+ .||.+|..+...
T Consensus 320 ---l~~L~~~l~~~~~~v~~~a~~~L~~l~~~ 348 (450)
T 2jdq_A 320 ---FPALISILQTAEFRTRKEAAWAITNATSG 348 (450)
T ss_dssp ---HHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhcCCHHHHHHHHHHHHHHHcC
Confidence 999999988643333 889999888765
No 39
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.17 E-value=0.0023 Score=82.60 Aligned_cols=135 Identities=16% Similarity=0.150 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcC-ChhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTT-CASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~-n~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
...++.+|.|+...++.....+...+.++.|..+|... +..+++.|.-+|..++. +..+.+.+...+ +++.|+.+
T Consensus 310 ~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~---~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g-~i~~Lv~l 385 (529)
T 3tpo_A 310 VTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP---KTNIQKEATWTMSNITAGRQDQIQQVVNHG-LVPFLVGV 385 (529)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCS---SHHHHHHHHHHHHHHHTSCHHHHHHHHHTT-HHHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHcCC---CHHHHHHHHHHHHHHhcccHHHHHHHHhcC-cHHHHHHH
Confidence 35678899999998888777777778888899988753 56788889999977765 777888777644 78888888
Q ss_pred HhhC-cchHHHHHHHHHHhhc--chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHh
Q 000065 2105 LHYA-PACREGVLHVLYALAS--TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLV 2168 (2462)
Q Consensus 2105 L~~~-p~~~~~~L~~L~aL~s--~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~ 2168 (2462)
|... ++.+..+.-+|..++. +.+.++..++.|++..|+++|... ++.++..+...|..+.
T Consensus 386 L~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i~~L~~LL~~~----d~~i~~~~L~aL~nil 448 (529)
T 3tpo_A 386 LSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK----DTKIIQVILDAISNIF 448 (529)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCS----CHHHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCHHHHHHHhcCC----CHHHHHHHHHHHHHHH
Confidence 8753 3455556677777764 567788889999999999999642 5778888888888876
No 40
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=98.09 E-value=0.00011 Score=83.85 Aligned_cols=235 Identities=20% Similarity=0.242 Sum_probs=171.0
Q ss_pred ChhhhhcccCCCCCCCCChhhHHHHHHHHhcCCh-hHHHHHHhhcchHHHHHHHHhhC-cchHHHHHHHHHHhhcc-hHH
Q 000065 2052 KLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCA-SCLEAMVADGSSLLLLLQMLHYA-PACREGVLHVLYALAST-PEL 2128 (2462)
Q Consensus 2052 ~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~-~CVeaiA~~~~vl~~Ll~lL~~~-p~~~~~~L~~L~aL~s~-t~l 2128 (2462)
.++.|+.+|... +..++..|+.+|..++... .+...+...+ ++..|+.+|... ++.+..++.+|..++.. ++.
T Consensus 3 ~i~~L~~~L~~~---~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g-~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~ 78 (252)
T 4hxt_A 3 DVEKLVKLLTST---DSETQKEAARDLAEIASGPASAIKAIVDAG-GVEVLVKLLTSTDSEVQKEAARALANIASGPDEA 78 (252)
T ss_dssp HHHHHHHHTTCS---CHHHHHHHHHHHHHHHTSCHHHHHHHHHTT-HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred cHHHHHHHHcCC---CHHHHHHHHHHHHHHhcCCcHHHHHHHHCC-CHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHH
Confidence 356677777653 4678899999998887655 4777777655 788899888753 45567789999999976 788
Q ss_pred HHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHHhhCcHHHHHHHhcCchhhHHHhhccc
Q 000065 2129 AWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSALEQT 2208 (2462)
Q Consensus 2129 vkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~KfLP~~fvdamrdsp~~a~v~~fes~ 2208 (2462)
.....+.|++..|+.+|... ++.+|..++.+|+.|.. +.|..+..+.+ .+.-...+.++.+
T Consensus 79 ~~~~~~~~~i~~l~~ll~~~----~~~v~~~a~~~L~~l~~---~~~~~~~~~~~-----------~~~i~~L~~~l~~- 139 (252)
T 4hxt_A 79 IKAIVDAGGVEVLVKLLTST----DSEVQKEAARALANIAS---GPDEAIKAIVD-----------AGGVEVLVKLLTS- 139 (252)
T ss_dssp HHHHHHTTHHHHHHHHTTCS----SHHHHHHHHHHHHHHTT---SCHHHHHHHHH-----------TTHHHHHHHHTTC-
T ss_pred HHHHHHCCCHHHHHHHHcCC----CHHHHHHHHHHHHHHHc---CCHHHHHHHHH-----------CCCHHHHHHHHcC-
Confidence 88889999999999999752 58899999999999975 22333322221 1111223333332
Q ss_pred CcCcccccCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCccccccccCCCCcEEeeeeehhhccCCCCCCCChHHHH
Q 000065 2209 TETPELVWTPAMAASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFL 2288 (2462)
Q Consensus 2209 ~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~nP~w~LR~PK~FL 2288 (2462)
T Consensus 140 -------------------------------------------------------------------------------- 139 (252)
T 4hxt_A 140 -------------------------------------------------------------------------------- 139 (252)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCChHHHHHHHHhhccccccchhhhhcCCcc
Q 000065 2289 EGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKLVAAVAYEGRRETMSTEEVKNGNSE 2368 (2462)
Q Consensus 2289 ~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~ 2368 (2462)
.|+++..-...++..|....+.....+...|.+|.|+..|.+.+
T Consensus 140 --------------------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~---------------- 183 (252)
T 4hxt_A 140 --------------------TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTD---------------- 183 (252)
T ss_dssp --------------------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSC----------------
T ss_pred --------------------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCC----------------
Confidence 12334445566777777777777788888999999999987431
Q ss_pred ccccccCCCCCCCCCCChhhHhhhhHHHHHHHhhC-ChhHHHHhhhccCCCCcchHHHHHHhccCCcch--hHHHHHHHH
Q 000065 2369 ADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAA-STTCAEAMAATSTGTPQVVPILMKAIGWQGGSI--LALETLKRV 2445 (2462)
Q Consensus 2369 ~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~-s~~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~--~a~etl~r~ 2445 (2462)
+.++..|+.+|..|+. +..+.+.+.+... ++.|.+.++.....+ .|+.+|..+
T Consensus 184 -------------------~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~-----i~~L~~ll~~~~~~v~~~a~~~L~~l 239 (252)
T 4hxt_A 184 -------------------SEVQKEAARALANIASGPTSAIKAIVDAGG-----VEVLQKLLTSTDSEVQKEAQRALENI 239 (252)
T ss_dssp -------------------HHHHHHHHHHHHHHTTSBHHHHHHHHHTTH-----HHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred -------------------HHHHHHHHHHHHHHHcCCHHHHHHHHHCCC-----HHHHHHHHCCCcHHHHHHHHHHHHHH
Confidence 3688999999999997 7777788877666 999999998754333 999999999
Q ss_pred HhcC
Q 000065 2446 VVAG 2449 (2462)
Q Consensus 2446 ~~~~ 2449 (2462)
....
T Consensus 240 ~~~~ 243 (252)
T 4hxt_A 240 KSGG 243 (252)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 8764
No 41
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.08 E-value=0.00032 Score=90.14 Aligned_cols=302 Identities=13% Similarity=0.113 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHhh--CccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcC-ChhHHHHHHhhcchHHHHH
Q 000065 2026 LQFGLTSLQNILTS--NPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTT-CASCLEAMVADGSSLLLLL 2102 (2462)
Q Consensus 2026 l~maL~AL~nLL~~--nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~-n~~CVeaiA~~~~vl~~Ll 2102 (2462)
...++.+|.+++.. +|... .+...+.++.|+.+|... +++.++..|+.+|..++. +..+...+...+ ++..|+
T Consensus 104 ~~~A~~~L~~ll~~~~~~~~~-~~~~~g~i~~Lv~~L~~~--~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g-~i~~Lv 179 (530)
T 1wa5_B 104 QLSATVKFRQILSREHRPPID-VVIQAGVVPRLVEFMREN--QPEMLQLEAAWALTNIASGTSAQTKVVVDAD-AVPLFI 179 (530)
T ss_dssp HHHHHHHHHHHTCCSSSCSHH-HHHHTTCHHHHHHTTSTT--SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT-CHHHHH
T ss_pred HHHHHHHHHHHhCCCCCccHH-HHHHCCCHHHHHHHhCCC--CCHHHHHHHHHHHHHHhCCCHHHHHHHHHCC-CHHHHH
Confidence 45688899999876 34332 244567889999999753 245789999999988876 456777776644 788888
Q ss_pred HHHhh-CcchHHHHHHHHHHhhcc-hHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHH
Q 000065 2103 QMLHY-APACREGVLHVLYALAST-PELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAIT 2180 (2462)
Q Consensus 2103 ~lL~~-~p~~~~~~L~~L~aL~s~-t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~ 2180 (2462)
.+|.. .++.+..++.+|..++.. ++.....+..|++..|+.+|.. .+..+|..++..|+.+..+.- |.....
T Consensus 180 ~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~----~~~~v~~~a~~~L~~L~~~~~--~~~~~~ 253 (530)
T 1wa5_B 180 QLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNS----NKPSLIRTATWTLSNLCRGKK--PQPDWS 253 (530)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGS----CCHHHHHHHHHHHHHHHCCSS--SCCCHH
T ss_pred HHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhcc----CCHHHHHHHHHHHHHHhCCCC--CCCcHH
Confidence 88875 456677899999999875 4666677889999999999975 357899999999999987531 222122
Q ss_pred HHhhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCccccccccCC
Q 000065 2181 LARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMR 2260 (2462)
Q Consensus 2181 L~KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y~~l~ 2260 (2462)
...-+-+.++..+.+. +.+.|......+..++.. . |+..
T Consensus 254 ~~~~~l~~L~~lL~~~--------------------d~~v~~~a~~~L~~L~~~--------~------~~~~------- 292 (530)
T 1wa5_B 254 VVSQALPTLAKLIYSM--------------------DTETLVDACWAISYLSDG--------P------QEAI------- 292 (530)
T ss_dssp HHGGGHHHHHHHTTCC--------------------CHHHHHHHHHHHHHHHSS--------C------HHHH-------
T ss_pred HHHhHHHHHHHHHcCC--------------------CHHHHHHHHHHHHHHhCC--------C------HHHH-------
Confidence 2222222333333221 245566666666665421 0 0000
Q ss_pred CCcEEeeeeehhhccCCCCCCCChHHHHH-HHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCC
Q 000065 2261 DEPQVGGIYVRLFLKDPKFPLRNPKRFLE-GLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLG 2339 (2462)
Q Consensus 2261 ~El~VGGVYlRLFl~nP~w~LR~PK~FL~-~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG 2339 (2462)
+.++. +++..++..+... +.++..-...++..|....+.....+-..|
T Consensus 293 ------------------------~~~~~~~~v~~Lv~lL~~~-------~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 341 (530)
T 1wa5_B 293 ------------------------QAVIDVRIPKRLVELLSHE-------STLVQTPALRAVGNIVTGNDLQTQVVINAG 341 (530)
T ss_dssp ------------------------HHHHHTTCHHHHHHGGGCS-------CHHHHHHHHHHHHHHTTSCHHHHHHHHHTT
T ss_pred ------------------------HHHHhcCcHHHHHHHHCCC-------ChhhHHHHHHHHHHHHcCCHHHHHHHHHcc
Confidence 11111 3455555555431 223334445566666666677667777789
Q ss_pred ChHHHHHHHHhhccccccchhhhhcCCccccccccCCCCCCCCCCChhhHhhhhHHHHHHHhhC-ChhHHHHhhhccCCC
Q 000065 2340 YVPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAA-STTCAEAMAATSTGT 2418 (2462)
Q Consensus 2340 ~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~-s~~Cv~ala~~~~~~ 2418 (2462)
.+|.|+..|.+.+ +.+++.|+..|..|+. +..+++.+.....
T Consensus 342 ~l~~L~~lL~~~~-----------------------------------~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~-- 384 (530)
T 1wa5_B 342 VLPALRLLLSSPK-----------------------------------ENIKKEACWTISNITAGNTEQIQAVIDANL-- 384 (530)
T ss_dssp HHHHHHHHTTCSC-----------------------------------HHHHHHHHHHHHHHTTSCHHHHHHHHHTTC--
T ss_pred hHHHHHHHHcCCC-----------------------------------HHHHHHHHHHHHHHHcCCHHHHHHHHHCCC--
Confidence 9999999887531 3688999999999985 6667777765555
Q ss_pred CcchHHHHHHhccCCcch--hHHHHHHHHHhcC
Q 000065 2419 PQVVPILMKAIGWQGGSI--LALETLKRVVVAG 2449 (2462)
Q Consensus 2419 ~~~v~~l~~a~~~~~~~~--~a~etl~r~~~~~ 2449 (2462)
+|+|++.++.....+ .|+.+|..+...+
T Consensus 385 ---l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~ 414 (530)
T 1wa5_B 385 ---IPPLVKLLEVAEYKTKKEACWAISNASSGG 414 (530)
T ss_dssp ---HHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHhcCCHHHHHHHHHHHHHHHhcC
Confidence 999999987643333 8999999988764
No 42
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.05 E-value=0.00036 Score=89.37 Aligned_cols=305 Identities=11% Similarity=0.104 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHhhCc-cchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCC-hhHHHHHHhhcchHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNP-NLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTC-ASCLEAMVADGSSLLLLLQ 2103 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP-~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n-~~CVeaiA~~~~vl~~Ll~ 2103 (2462)
...++.+|.+++...+ .....+...+.++.|..+|... +++.++..|+.+|..++.. ..+...+...+ ++..|+.
T Consensus 91 ~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~--~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g-~i~~L~~ 167 (528)
T 4b8j_A 91 QLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTRE--DFPQLQFEAAWALTNIASGTSENTKVVIDHG-AVPIFVK 167 (528)
T ss_dssp HHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCT--TCHHHHHHHHHHHHHHHTSCHHHHHHHHHTT-HHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCC--CCHHHHHHHHHHHHHHhCCCHHHHHHHHhCC-cHHHHHH
Confidence 3567889999988765 3334455668899999999753 2367899999999888764 77777777654 7888999
Q ss_pred HHhh-CcchHHHHHHHHHHhhcc-hHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHH
Q 000065 2104 MLHY-APACREGVLHVLYALAST-PELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITL 2181 (2462)
Q Consensus 2104 lL~~-~p~~~~~~L~~L~aL~s~-t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L 2181 (2462)
+|.. .++.+..++.+|..++.. +......+..|++..|+.+|..+ .+..+|..++..|..+.... ..++. ...
T Consensus 168 lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~---~~~~v~~~a~~~L~~L~~~~-~~~~~-~~~ 242 (528)
T 4b8j_A 168 LLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEH---TKLSMLRNATWTLSNFCRGK-PQPSF-EQT 242 (528)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTT---CCHHHHHHHHHHHHHHHCSS-SCCCH-HHH
T ss_pred HhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcC---CCHHHHHHHHHHHHHHHcCC-CCCcH-HHH
Confidence 8875 445667788999998865 45666677889999999999543 36889999999999998864 12221 111
Q ss_pred HhhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCccccccccCCC
Q 000065 2182 ARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRD 2261 (2462)
Q Consensus 2182 ~KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y~~l~~ 2261 (2462)
...+ ...+.++.+ . +.+.+......+..++.. ++... .
T Consensus 243 ~~~l-------------~~L~~lL~~--~------~~~v~~~a~~aL~~l~~~---------------~~~~~--~---- 280 (528)
T 4b8j_A 243 RPAL-------------PALARLIHS--N------DEEVLTDACWALSYLSDG---------------TNDKI--Q---- 280 (528)
T ss_dssp TTHH-------------HHHHHHTTC--C------CHHHHHHHHHHHHHHTSS---------------CHHHH--H----
T ss_pred HHHH-------------HHHHHHHCC--C------CHHHHHHHHHHHHHHHcC---------------CHHHH--H----
Confidence 2222 123334422 1 344555555555544321 00000 0
Q ss_pred CcEEeeeeehhhccCCCCCCCChHHHHHHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCCh
Q 000065 2262 EPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYV 2341 (2462)
Q Consensus 2262 El~VGGVYlRLFl~nP~w~LR~PK~FL~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~l 2341 (2462)
.+ +-.+++..++..+... ++++..-...++..|....+.....+...|.+
T Consensus 281 ----------~~-------------~~~g~v~~Lv~lL~~~-------~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l 330 (528)
T 4b8j_A 281 ----------AV-------------IEAGVCPRLVELLLHP-------SPSVLIPALRTVGNIVTGDDAQTQCIIDHQAL 330 (528)
T ss_dssp ----------HH-------------HHTTCHHHHHHHTTCS-------CHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHH
T ss_pred ----------HH-------------HHcCHHHHHHHHHcCC-------ChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhH
Confidence 00 1113566666666543 22333444556666666677777778888999
Q ss_pred HHHHHHHHhhccccccchhhhhcCCccccccccCCCCCCCCCCChhhHhhhhHHHHHHHhhC-ChhHHHHhhhccCCCCc
Q 000065 2342 PKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAA-STTCAEAMAATSTGTPQ 2420 (2462)
Q Consensus 2342 pkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~-s~~Cv~ala~~~~~~~~ 2420 (2462)
|.|+.+|.+.. .+.+++.|..+|..|+. +..+++.+.....
T Consensus 331 ~~L~~lL~~~~----------------------------------~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~---- 372 (528)
T 4b8j_A 331 PCLLSLLTQNL----------------------------------KKSIKKEACWTISNITAGNKDQIQAVINAGI---- 372 (528)
T ss_dssp HHHHHHHHSCC----------------------------------CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTC----
T ss_pred HHHHHHHcCCC----------------------------------cHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC----
Confidence 99999998531 13678899999999985 6667777776666
Q ss_pred chHHHHHHhccCCcch--hHHHHHHHHHhcC
Q 000065 2421 VVPILMKAIGWQGGSI--LALETLKRVVVAG 2449 (2462)
Q Consensus 2421 ~v~~l~~a~~~~~~~~--~a~etl~r~~~~~ 2449 (2462)
+|+|++.++.....+ .|+.+|..+...+
T Consensus 373 -i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~ 402 (528)
T 4b8j_A 373 -IGPLVNLLQTAEFDIKKEAAWAISNATSGG 402 (528)
T ss_dssp -HHHHHHHHHHSCHHHHHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHhcCCHHHHHHHHHHHHHHHcCC
Confidence 999999988653333 8999999988764
No 43
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.03 E-value=0.0034 Score=80.81 Aligned_cols=136 Identities=15% Similarity=0.133 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhc-CChhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLT-TCASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls-~n~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
...++.+|.|+...++.....+...+.++.|..+|... +..+++.|..+|..++ .+..+.+.+...+ +++.|+.+
T Consensus 291 ~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~---~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g-~i~~Lv~l 366 (510)
T 3ul1_B 291 VTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP---KTNIQKEATWTMSNITAGRQDQIQQVVNHG-LVPFLVGV 366 (510)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-CTTCS---SHHHHHHHHHHHHHHTTSCHHHHHHHHHTT-HHHHHHHH
T ss_pred hhHHHHHHHHhhcCCHHHHHHHhhccchHHHHHHhcCC---CHHHHHHHHHHHHHHHcCcHHHHHHHHhcC-CHHHHHHH
Confidence 35678899999998888777777778888888888653 5678999999998776 4777888787654 78888888
Q ss_pred Hhh-CcchHHHHHHHHHHhhc--chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhc
Q 000065 2105 LHY-APACREGVLHVLYALAS--TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVG 2169 (2462)
Q Consensus 2105 L~~-~p~~~~~~L~~L~aL~s--~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~a 2169 (2462)
+.. .++.+..+.-+|..++. +.+.+...++.|++..|+++|... ++.++..+...|..|..
T Consensus 367 L~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~~~----d~~i~~~~L~aL~nil~ 430 (510)
T 3ul1_B 367 LSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK----DTKIIQVILDAISNIFQ 430 (510)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGCS----CHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCC----CHHHHHHHHHHHHHHHH
Confidence 875 34555567777777764 567788889999999999999642 57788888888888763
No 44
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=97.98 E-value=0.008 Score=79.40 Aligned_cols=346 Identities=16% Similarity=0.149 Sum_probs=207.0
Q ss_pred HHHHHHHHHhhhcccCCCchhhHHHhcCHHHHHHHHHHhhhcccCCCCCCCccceeehhhhhhhhhhcc-ChHHHHHHHh
Q 000065 1643 LLVAASELLWLTCASSSLNGEELVRDGGIQLLSTLLSRCMCVVQKTTPAMEPSAVIVTNVMRTFSVLSQ-FESARTEVLQ 1721 (2462)
Q Consensus 1643 ll~~A~El~~~Tv~~S~lNaeeL~re~G~~~L~~~l~rC~~vl~~~s~~~~~~~~v~~~~~r~~~v~a~-F~~cr~~i~~ 1721 (2462)
....|.+.+..-+.....+.+.+++.|+++.|.+++..- ..++-..+++++..++. .++++..+.+
T Consensus 114 v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~-------------~~~~~~~a~~~L~~La~~~~~~~~~i~~ 180 (644)
T 2z6h_A 114 VLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT-------------NVKFLAITTDCLQILAYGNQESKLIILA 180 (644)
T ss_dssp HHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCC-------------CHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcC-------------CHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 344444544444444455566666788888777666421 11344455667776664 7788888877
Q ss_pred hcchHHHHHHhhccccchhHHHHHHHHHHHhhCCHHHHHHHHHhccHHHHHHHhhcCCCcccccCccccccccccHHHHH
Q 000065 1722 FSGLVQDIVHCTELELVPGAVDAALQTIAHVSVSSELQDALLKAGALWFLLPLLLQYDSTAEKSDTNESHGVGASVQIAK 1801 (2462)
Q Consensus 1722 ~~~l~~di~~~l~l~~~~~l~~aALe~v~~~a~~~elq~~i~~~GVLw~LL~lLf~yD~Tlees~le~~~~~~~~~qivk 1801 (2462)
.. .+.-++.++.-.....++..++.++.+++.+++.+..+.++|++-.|+.++-.. +....
T Consensus 181 ~g-~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~-----------------~~~~~- 241 (644)
T 2z6h_A 181 SG-GPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP-----------------SQRLV- 241 (644)
T ss_dssp TT-HHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCS-----------------CHHHH-
T ss_pred cC-ChHHHHHHHHcCChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhcC-----------------CHHHH-
Confidence 64 455666666544445678899999999999999999999999988888877321 12222
Q ss_pred HHHHHHHHHHHHHhhCcCCCCCCCCccHHHHHHHHHhchHHHHHHhhccChHHHHHHhhccCCCcccccchhhHHHHHHH
Q 000065 1802 NMHAVRAAQALSRLSGLCSNGISIPYNEAAASALRALLTPKLASLLKDQIPKNLLSKLNTNLESPEIIWNSSTRAELLKF 1881 (2462)
Q Consensus 1802 n~lAk~a~~aL~~L~g~~~d~~~~P~~~~v~~~L~klLpP~l~~~L~d~~p~~~L~~L~Sn~EnPeLIWnn~tRaeL~~~ 1881 (2462)
..++.+|..|.....+ ... ....+ |.++..|.+. |...|......
T Consensus 242 ----~~a~~~L~nL~~~~~~----~~~------~~~~i-~~Lv~lL~~~--------------------d~~v~~~a~~a 286 (644)
T 2z6h_A 242 ----QNCLWTLRNLSDAATK----QEG------MEGLL-GTLVQLLGSD--------------------DINVVTCAAGI 286 (644)
T ss_dssp ----HHHHHHHHHHGGGCTT----CCS------CHHHH-HHHHHHTTCS--------------------CHHHHHHHHHH
T ss_pred ----HHHHHHHHHHhhcchh----hhh------hhhHH-HHHHHHHcCC--------------------CHHHHHHHHHH
Confidence 2245566666432111 000 11122 3334444332 23344444443
Q ss_pred HHHHHhccCCCCCcccccccccccccccCCcEEeeEEEeeeccCCCCCCCChHHHH-HHHHHHHHHHhhcccCCCCcccc
Q 000065 1882 VDQQRASQSPDGSYDLKDSNGFLYEALSKELYVGNVYLRVYNDQPDFEITEPEAFC-VALIDFISYLVHNQSATKSDVQG 1960 (2462)
Q Consensus 1882 L~~q~~~~~~~~~w~l~~~~~f~Y~~l~~EL~VGGVYLRlfneqP~w~Lr~Pk~Fl-~~LLdfl~~~~~~~~~~~~d~~~ 1960 (2462)
|..... .++ .. -+.++ ...++.+.+.+.....
T Consensus 287 L~~L~~-~~~-------~~--------------------------------~~~v~~~g~v~~Lv~lL~~~~~------- 319 (644)
T 2z6h_A 287 LSNLTC-NNY-------KN--------------------------------KMMVCQVGGIEALVRTVLRAGD------- 319 (644)
T ss_dssp HHHHHT-TCH-------HH--------------------------------HHHHHHTTHHHHHHHHHHHHTT-------
T ss_pred HHHHHc-CCH-------HH--------------------------------HHHHHHcCCHHHHHHHHHccCC-------
Confidence 332210 000 00 00000 0122233332211000
Q ss_pred ccccccccchhhhccccCCCCCCccccCCCCcccCccccccccccccccccccccCcchHHHHHHHHHHHHHHHHHHhhC
Q 000065 1961 EESLDGLSSKIVQDKLSLDPSSSKTFELPSDATDSSMNERKVNDESLAVSDRKVTGKEDSVMIKNLQFGLTSLQNILTSN 2040 (2462)
Q Consensus 1961 ~~~~~~~~~~~~qd~~~~~~~~~~~~ev~~~~~~~~~~~~~l~~~s~~~s~~~~~~~~d~e~l~~l~maL~AL~nLL~~n 2040 (2462)
..+. ...++.+|.|+-..+
T Consensus 320 ----------------------------------------------------------~~~v---~~~a~~aL~nL~~~~ 338 (644)
T 2z6h_A 320 ----------------------------------------------------------REDI---TEPAICALRHLTSRH 338 (644)
T ss_dssp ----------------------------------------------------------CHHH---HHHHHHHHHHHTSSS
T ss_pred ----------------------------------------------------------cHHH---HHHHHHHHHHHhcCC
Confidence 0112 356788888887665
Q ss_pred ccch---hcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHHhhC---------
Q 000065 2041 PNLA---SIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQMLHYA--------- 2108 (2462)
Q Consensus 2041 P~la---~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL~~~--------- 2108 (2462)
+..+ ..+...+.++.|..+|... .+..+++.|..+|..++.+..+...+...+ ++..|+.+|...
T Consensus 339 ~~~~~~q~~v~~~~~l~~L~~lL~~~--~~~~v~~~a~~~L~nLa~~~~~~~~i~~~~-~i~~Lv~lL~~~~~~vr~~a~ 415 (644)
T 2z6h_A 339 QEAEMAQNAVRLHYGLPVVVKLLHPP--SHWPLIKATVGLIRNLALCPANHAPLREQG-AIPRLVQLLVRAHQDTQRRTS 415 (644)
T ss_dssp TTHHHHHHHHHHTTHHHHHHHTTSTT--CCHHHHHHHHHHHHHHTTSGGGHHHHHHTT-HHHHHHHHHHHHHHHHTTC--
T ss_pred chHHHHHHHHHHccChHHHHHHhCcc--CchHHHHHHHHHHHHHccCHHHHHHHHHcC-CHHHHHHHHhccchhhhhHhh
Confidence 5422 2233456688888888753 124789999999999999888887777644 788888887641
Q ss_pred --------------cchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcC
Q 000065 2109 --------------PACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQ 2170 (2462)
Q Consensus 2109 --------------p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD 2170 (2462)
.+.+..++.+|..|+.++.......+.|++..|+++|... .+.+|..++.+|..+..+
T Consensus 416 ~al~n~~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~----~~~v~~~a~~aL~~l~~~ 487 (644)
T 2z6h_A 416 MGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSP----IENIQRVAAGVLCELAQD 487 (644)
T ss_dssp --------CCSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTTCS----CHHHHHHHHHHHHHHHTS
T ss_pred hccccchhcccccHHHHHHHHHHHHHHHhcCHHHHHHHHhCCcHHHHHHHHcCC----CHHHHHHHHHHHHHHHcC
Confidence 1223457788888888777777777899999999998643 567899999999998764
No 45
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=97.90 E-value=0.0016 Score=88.27 Aligned_cols=135 Identities=7% Similarity=0.051 Sum_probs=109.6
Q ss_pred HHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHHhh
Q 000065 2028 FGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQMLHY 2107 (2462)
Q Consensus 2028 maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL~~ 2107 (2462)
-++.||.|+...+++....+...|.+++|..+|... +..|+..|+++|..++.+.++...+......+..|+.++..
T Consensus 600 eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~---~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s 676 (810)
T 3now_A 600 ESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMED---HLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCED 676 (810)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSC---CTTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCC---CHHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcC
Confidence 468899999999888777777778899999999764 56899999999999999999888877434578888888875
Q ss_pred C-cchHHHHHHHHHHhhc-chHHHHHHHH-cCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhc
Q 000065 2108 A-PACREGVLHVLYALAS-TPELAWAAAK-HGGVVYILELLLPSQQETPLQQRAAAASLLGKLVG 2169 (2462)
Q Consensus 2108 ~-p~~~~~~L~~L~aL~s-~t~lvkqal~-~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~a 2169 (2462)
. .+.+..+.-+|..+++ ++..++..+. .|++..|++++.+. +..+|..++..|..|..
T Consensus 677 ~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~----d~~vq~~A~~aL~NL~~ 737 (810)
T 3now_A 677 EDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANP----SPAVQHRGIVIILNMIN 737 (810)
T ss_dssp SSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCS----SHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCC----CHHHHHHHHHHHHHHHh
Confidence 3 2344557778888887 6777888888 89999999998753 57889999999999876
No 46
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=97.83 E-value=0.00072 Score=86.67 Aligned_cols=304 Identities=12% Similarity=0.109 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCC-hhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTC-ASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n-~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
...++.+|.++-..++.....+...+.++.|+.+|... +..++..|+.+|..++.. ..|...+...+ ++..|+.+
T Consensus 135 ~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~---~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g-~l~~Ll~l 210 (528)
T 4b8j_A 135 QFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSS---SDDVREQAVWALGNVAGDSPKCRDLVLANG-ALLPLLAQ 210 (528)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-CHHHHHHT
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCC---CHHHHHHHHHHHHHHhCCChhhHHHHHHCC-cHHHHHHH
Confidence 35678899999988888777777778899999999753 568999999999888744 66777776644 78888888
Q ss_pred Hhh--CcchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHH
Q 000065 2105 LHY--APACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLA 2182 (2462)
Q Consensus 2105 L~~--~p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~ 2182 (2462)
|.. .++.+..++.+|..|+............|++..|+.+|... .+.+|..++.+|+.+... ...++..++.
T Consensus 211 L~~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL~~~----~~~v~~~a~~aL~~l~~~--~~~~~~~~~~ 284 (528)
T 4b8j_A 211 LNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSN----DEEVLTDACWALSYLSDG--TNDKIQAVIE 284 (528)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCC----CHHHHHHHHHHHHHHTSS--CHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHcC--CHHHHHHHHH
Confidence 843 34566778889999886532222334588888999988642 578999999999999753 2234444433
Q ss_pred hhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCccccccccCCCC
Q 000065 2183 RFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRDE 2262 (2462)
Q Consensus 2183 KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y~~l~~E 2262 (2462)
.=.-+. .+.++.+. +...|......|..++.. . ++...
T Consensus 285 ~g~v~~------------Lv~lL~~~--------~~~v~~~a~~~L~nl~~~--------~------~~~~~-------- 322 (528)
T 4b8j_A 285 AGVCPR------------LVELLLHP--------SPSVLIPALRTVGNIVTG--------D------DAQTQ-------- 322 (528)
T ss_dssp TTCHHH------------HHHHTTCS--------CHHHHHHHHHHHHHHTTS--------C------HHHHH--------
T ss_pred cCHHHH------------HHHHHcCC--------ChhHHHHHHHHHHHHHcC--------C------HHHHH--------
Confidence 222233 33444322 234555655566555421 0 00000
Q ss_pred cEEeeeeehhhccCCCCCCCChHHHHHHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCChH
Q 000065 2263 PQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVP 2342 (2462)
Q Consensus 2263 l~VGGVYlRLFl~nP~w~LR~PK~FL~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~lp 2342 (2462)
.++ + .+++..++..+.... +..+..-...++..|....+.....+...|-+|
T Consensus 323 ---------~~~-~------------~~~l~~L~~lL~~~~------~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~ 374 (528)
T 4b8j_A 323 ---------CII-D------------HQALPCLLSLLTQNL------KKSIKKEACWTISNITAGNKDQIQAVINAGIIG 374 (528)
T ss_dssp ---------HHH-T------------TTHHHHHHHHHHSCC------CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHH
T ss_pred ---------HHH-H------------hhhHHHHHHHHcCCC------cHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH
Confidence 000 0 135555666665420 223444456667777766676667777789999
Q ss_pred HHHHHHHhhccccccchhhhhcCCccccccccCCCCCCCCCCChhhHhhhhHHHHHHHhhCC--hhHHHHhhhccCCCCc
Q 000065 2343 KLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAAS--TTCAEAMAATSTGTPQ 2420 (2462)
Q Consensus 2343 kl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~s--~~Cv~ala~~~~~~~~ 2420 (2462)
.|+.+|...+ +.++..|+..|..|+.+ ..+...|.+..+
T Consensus 375 ~L~~lL~~~~-----------------------------------~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~---- 415 (528)
T 4b8j_A 375 PLVNLLQTAE-----------------------------------FDIKKEAAWAISNATSGGSHDQIKYLVSEGC---- 415 (528)
T ss_dssp HHHHHHHHSC-----------------------------------HHHHHHHHHHHHHHHHHSCHHHHHHHHHTTC----
T ss_pred HHHHHHhcCC-----------------------------------HHHHHHHHHHHHHHHcCCCHHHHHHHHHCCC----
Confidence 9999998532 36788999999888875 677788877777
Q ss_pred chHHHHHHhccCCcch--hHHHHHHHHHhcC
Q 000065 2421 VVPILMKAIGWQGGSI--LALETLKRVVVAG 2449 (2462)
Q Consensus 2421 ~v~~l~~a~~~~~~~~--~a~etl~r~~~~~ 2449 (2462)
|++|+..+......+ .|+++|..++..+
T Consensus 416 -i~~L~~lL~~~d~~v~~~al~~L~~l~~~~ 445 (528)
T 4b8j_A 416 -IKPLCDLLICPDIRIVTVCLEGLENILKVG 445 (528)
T ss_dssp -HHHHHHGGGCSCHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999998743333 8999999998764
No 47
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=97.77 E-value=0.002 Score=81.87 Aligned_cols=337 Identities=14% Similarity=0.138 Sum_probs=200.9
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQML 2105 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL 2105 (2462)
...+..+|.++-...+.-...+...+.++.|...|... ++..++..+...|..++.+.+....|...+ .+..|+.+|
T Consensus 34 ~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~--~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g-~i~~L~~lL 110 (529)
T 1jdh_A 34 VNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNT--NDVETARCTAGTLHNLSHHREGLLAIFKSG-GIPALVKML 110 (529)
T ss_dssp HHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHTTSHHHHHHHHHTT-HHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcC--CCHHHHHHHHHHHHHHHcCchhHHHHHHcC-CHHHHHHHH
Confidence 35677888888766554333333336677888888542 245789999999999999988888888764 788899888
Q ss_pred hh-CcchHHHHHHHHHHhhcch-HHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHHh
Q 000065 2106 HY-APACREGVLHVLYALASTP-ELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLAR 2183 (2462)
Q Consensus 2106 ~~-~p~~~~~~L~~L~aL~s~t-~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~K 2183 (2462)
.. .++.+..++.+|..++..+ .......+.|++..|+++|... +.+.|..++..|..+... .+..+..+..
T Consensus 111 ~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~----~~~~~~~~~~~L~~la~~---~~~~~~~i~~ 183 (529)
T 1jdh_A 111 GSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT----NVKFLAITTDCLQILAYG---NQESKLIILA 183 (529)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCC----CHHHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcC----CHHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 75 3455667899999998753 4555556789999999999753 578899999999888652 2433333222
Q ss_pred -hCcHHHHHHHhcCchhh----HHHhhcccCcCcccccCHHHHHHHHH--HHHHHHHHHHHHHhcCCcccccCCcccccc
Q 000065 2184 -FLPDGLVSVIRDGPGEA----VVSALEQTTETPELVWTPAMAASLSA--QISTMASDLYREQMKGRVVDWDVPEQASAQ 2256 (2462)
Q Consensus 2184 -fLP~~fvdamrdsp~~a----~v~~fes~~EnPELIWn~~mR~~v~~--~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y 2256 (2462)
=..+.++..|+++..+. +..++..-..+|+ .|..+.+ .+..+. . ...++. ++ .. .
T Consensus 184 ~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~------~~~~~~~~g~~~~L~----~-ll~~~~-----~~-~~-~ 245 (529)
T 1jdh_A 184 SGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS------NKPAIVEAGGMQALG----L-HLTDPS-----QR-LV-Q 245 (529)
T ss_dssp TTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTT------HHHHHHHTTHHHHHH----T-TTTSSC-----HH-HH-H
T ss_pred CCCHHHHHHHHHhCChHHHHHHHHHHHHHHhcCcc------cHHHHHHCCCHHHHH----H-HHhCCC-----hH-HH-H
Confidence 12344555565542211 0111111111111 1211110 000000 0 000000 00 00 0
Q ss_pred ccCCCCcEEeeeeehhhccCCCCCCCChHHHHHHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhc
Q 000065 2257 QEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVG 2336 (2462)
Q Consensus 2257 ~~l~~El~VGGVYlRLFl~nP~w~LR~PK~FL~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp 2336 (2462)
. ..++.-.|--..|.+. ...+++..++..+... |+++..-...++..|....+...+.+.
T Consensus 246 ~-------a~~~L~~l~~~~~~~~------~~~~~i~~L~~ll~~~-------~~~v~~~a~~~L~~L~~~~~~~~~~~~ 305 (529)
T 1jdh_A 246 N-------CLWTLRNLSDAATKQE------GMEGLLGTLVQLLGSD-------DINVVTCAAGILSNLTCNNYKNKMMVC 305 (529)
T ss_dssp H-------HHHHHHHHHTTCTTCS------CCHHHHHHHHHHTTCS-------CHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred H-------HHHHHHHHhcCChhhH------HHHhHHHHHHHHHcCC-------CHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 0 0000000000001110 1135667777766432 344555567778888777777888999
Q ss_pred cCCChHHHHHHHHhhccccccchhhhhcCCccccccccCCCCCCCCCCChhhHhhhhHHHHHHHhhCC----hhHHHHhh
Q 000065 2337 YLGYVPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAAS----TTCAEAMA 2412 (2462)
Q Consensus 2337 ~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~s----~~Cv~ala 2412 (2462)
..|.+|+|+..|.+.+. .+.++..|++.|..|+.. +.+.+.+.
T Consensus 306 ~~~~v~~L~~ll~~~~~---------------------------------~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~ 352 (529)
T 1jdh_A 306 QVGGIEALVRTVLRAGD---------------------------------REDITEPAICALRHLTSRHQEAEMAQNAVR 352 (529)
T ss_dssp HTTHHHHHHHHHHHHTT---------------------------------CHHHHHHHHHHHHHHTSSSTTHHHHHHHHH
T ss_pred HcCChHHHHHHHHccCC---------------------------------HHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 99999999999986421 135788999999999875 22445666
Q ss_pred hccCCCCcchHHHHHHhccCCc-ch--hHHHHHHHHHhc
Q 000065 2413 ATSTGTPQVVPILMKAIGWQGG-SI--LALETLKRVVVA 2448 (2462)
Q Consensus 2413 ~~~~~~~~~v~~l~~a~~~~~~-~~--~a~etl~r~~~~ 2448 (2462)
.... +|+|.+.++...+ .+ .||.+|..+...
T Consensus 353 ~~~~-----i~~L~~lL~~~~~~~v~~~a~~~l~nl~~~ 386 (529)
T 1jdh_A 353 LHYG-----LPVVVKLLHPPSHWPLIKATVGLIRNLALC 386 (529)
T ss_dssp HTTC-----HHHHHHTTSTTCCHHHHHHHHHHHHHHTTS
T ss_pred HcCC-----hhHHHHHhccccchHHHHHHHHHHHHHhcC
Confidence 5555 9999999987643 33 788888887653
No 48
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=97.77 E-value=0.0007 Score=77.78 Aligned_cols=233 Identities=18% Similarity=0.181 Sum_probs=163.5
Q ss_pred ChhhhhcccCCCCCCCCChhhHHHHHH-HHhcCChhHHHHHHhhcchHHHHHHHHhh-CcchHHHHHHHHHHhhc-chHH
Q 000065 2052 KLLPLFECFSVPFAPDSNIPQLCLNVL-SLLTTCASCLEAMVADGSSLLLLLQMLHY-APACREGVLHVLYALAS-TPEL 2128 (2462)
Q Consensus 2052 ~L~~Lf~~L~~~~~~~~~vq~~aL~VL-~~ls~n~~CVeaiA~~~~vl~~Ll~lL~~-~p~~~~~~L~~L~aL~s-~t~l 2128 (2462)
....++..|... +..++..|+..| +.++.+.+-.+.+...+ ++..|+.+|.. .++.+..++.+|..++. +++.
T Consensus 13 ~~~~~~~~L~s~---~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g-~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~ 88 (252)
T 4db8_A 13 ELPQMTQQLNSD---DMQEQLSATRKFSQILSDGNEQIQAVIDAG-ALPALVQLLSSPNEQILQEALWALSNIASGGNEQ 88 (252)
T ss_dssp SHHHHHHHHHSS---CSSHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred hHHHHHHHHcCC---CHHHHHHHHHHHHHHHcCCCchHHHHHHcC-cHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHH
Confidence 344566666543 568899999999 56666666666777654 78889988875 35566778999999997 6778
Q ss_pred HHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHHhhCcHHHHHHHhcCchhhHHHhhccc
Q 000065 2129 AWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSALEQT 2208 (2462)
Q Consensus 2129 vkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~KfLP~~fvdamrdsp~~a~v~~fes~ 2208 (2462)
....++.|++..|+.+|... ++.+|..++.+|+.+..+. ..+ .+.+.+.
T Consensus 89 ~~~i~~~g~i~~L~~lL~~~----~~~v~~~a~~~L~~l~~~~----~~~-----------~~~~~~~------------ 137 (252)
T 4db8_A 89 IQAVIDAGALPALVQLLSSP----NEQILQEALWALSNIASGG----NEQ-----------IQAVIDA------------ 137 (252)
T ss_dssp HHHHHHTTHHHHHHHGGGCS----CHHHHHHHHHHHHHHTTSC----HHH-----------HHHHHHT------------
T ss_pred HHHHHHcCCHHHHHHHHcCC----CHHHHHHHHHHHHHhhcCC----chH-----------HHHHHHC------------
Confidence 88889999999999999763 5789999999999983210 000 0000000
Q ss_pred CcCcccccCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCccccccccCCCCcEEeeeeehhhccCCCCCCCChHHHH
Q 000065 2209 TETPELVWTPAMAASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFL 2288 (2462)
Q Consensus 2209 ~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~nP~w~LR~PK~FL 2288 (2462)
T Consensus 138 -------------------------------------------------------------------------------- 137 (252)
T 4db8_A 138 -------------------------------------------------------------------------------- 137 (252)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCChHHHHHHHHhhccccccchhhhhcCCcc
Q 000065 2289 EGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKLVAAVAYEGRRETMSTEEVKNGNSE 2368 (2462)
Q Consensus 2289 ~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~ 2368 (2462)
+.+..++..+... |.++..-...++..|....+.....+...|.+|.|+..|.+.+
T Consensus 138 -~~i~~L~~lL~~~-------~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~---------------- 193 (252)
T 4db8_A 138 -GALPALVQLLSSP-------NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPN---------------- 193 (252)
T ss_dssp -THHHHHHHGGGCS-------CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSS----------------
T ss_pred -CCHHHHHHHHhCC-------CHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCCC----------------
Confidence 1224444444331 3345555677788888777787788888999999999987531
Q ss_pred ccccccCCCCCCCCCCChhhHhhhhHHHHHHHhh-CChhHHHHhhhccCCCCcchHHHHHHhccCCcch--hHHHHHHHH
Q 000065 2369 ADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLA-ASTTCAEAMAATSTGTPQVVPILMKAIGWQGGSI--LALETLKRV 2445 (2462)
Q Consensus 2369 ~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls-~s~~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~--~a~etl~r~ 2445 (2462)
+.++..|+.+|..|+ .+....+.+.+... ++.|.+.++.....+ .|+.+|..+
T Consensus 194 -------------------~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~-----i~~L~~ll~~~~~~v~~~A~~~L~~l 249 (252)
T 4db8_A 194 -------------------EQILQEALWALSNIASGGNEQKQAVKEAGA-----LEKLEQLQSHENEKIQKEAQEALEKL 249 (252)
T ss_dssp -------------------HHHHHHHHHHHHHHTTSCHHHHHHHHHTTH-----HHHHHTTTTCSSSHHHHTHHHHHHTT
T ss_pred -------------------HHHHHHHHHHHHHHhcCCHHHHHHHHHCCc-----HHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 367889999999998 46666677765555 999999998754443 888888776
Q ss_pred Hh
Q 000065 2446 VV 2447 (2462)
Q Consensus 2446 ~~ 2447 (2462)
..
T Consensus 250 ~~ 251 (252)
T 4db8_A 250 QS 251 (252)
T ss_dssp C-
T ss_pred hc
Confidence 43
No 49
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=97.69 E-value=0.014 Score=79.22 Aligned_cols=356 Identities=15% Similarity=0.121 Sum_probs=208.9
Q ss_pred HHHHHHHHHhhhcccCCCchhhHHHhcCHHHHHHHHHHhhhcccCCCCCCCccceeehhhhhhhhhhcc-ChHHHHHHHh
Q 000065 1643 LLVAASELLWLTCASSSLNGEELVRDGGIQLLSTLLSRCMCVVQKTTPAMEPSAVIVTNVMRTFSVLSQ-FESARTEVLQ 1721 (2462)
Q Consensus 1643 ll~~A~El~~~Tv~~S~lNaeeL~re~G~~~L~~~l~rC~~vl~~~s~~~~~~~~v~~~~~r~~~v~a~-F~~cr~~i~~ 1721 (2462)
....|...+..-+.....+.+.++..|+++.|.+++... ...+...++.++..++. .++++..+.+
T Consensus 250 v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~-------------~~~v~~~a~~aL~~La~~~~e~~~~i~~ 316 (780)
T 2z6g_A 250 VLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT-------------NVKFLAITTDCLQILAYGNQESKLIILA 316 (780)
T ss_dssp HHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCC-------------CHHHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcC-------------CHHHHHHHHHHHHHHhcCChHHHHHHHH
Confidence 444555555554444454555555678888777666421 12233445556665553 5778888776
Q ss_pred hcchHHHHHHhhccccchhHHHHHHHHHHHhhCCHHHHHHHHHhccHHHHHHHhhcCCCcccccCccccccccccHHHHH
Q 000065 1722 FSGLVQDIVHCTELELVPGAVDAALQTIAHVSVSSELQDALLKAGALWFLLPLLLQYDSTAEKSDTNESHGVGASVQIAK 1801 (2462)
Q Consensus 1722 ~~~l~~di~~~l~l~~~~~l~~aALe~v~~~a~~~elq~~i~~~GVLw~LL~lLf~yD~Tlees~le~~~~~~~~~qivk 1801 (2462)
. +.+..++.++.-.........++.++..++.+.+....+++.|++-.|+.+|... +...++
T Consensus 317 ~-~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~~-----------------~~~~~~ 378 (780)
T 2z6g_A 317 S-GGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP-----------------SQRLVQ 378 (780)
T ss_dssp T-THHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTCS-----------------CHHHHH
T ss_pred c-CCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcChHHHHHHHHhchHHHHHHHHcCC-----------------chHHHH
Confidence 6 4456667666644444567788999999999999999999999998888887421 122222
Q ss_pred HHHHHHHHHHHHHhhCcCCCCCCCCccHHHHHHHHHhchHHHHHHhhccChHHHHHHhhccCCCcccccchhhHHHHHHH
Q 000065 1802 NMHAVRAAQALSRLSGLCSNGISIPYNEAAASALRALLTPKLASLLKDQIPKNLLSKLNTNLESPEIIWNSSTRAELLKF 1881 (2462)
Q Consensus 1802 n~lAk~a~~aL~~L~g~~~d~~~~P~~~~v~~~L~klLpP~l~~~L~d~~p~~~L~~L~Sn~EnPeLIWnn~tRaeL~~~ 1881 (2462)
.++.+|..|....... ... ..++ |.++..|... +...|......
T Consensus 379 -----~a~~~L~~L~~~~~~~---~~~-------~~~i-~~Lv~lL~~~--------------------d~~vr~~A~~a 422 (780)
T 2z6g_A 379 -----NCLWTLRNLSDAATKQ---EGM-------EGLL-GTLVQLLGSD--------------------DINVVTCAAGI 422 (780)
T ss_dssp -----HHHHHHHHHHTTCTTC---SCC-------HHHH-HHHHHHTTCS--------------------CHHHHHHHHHH
T ss_pred -----HHHHHHHHHhccchhh---hhh-------hhHH-HHHHHHHcCC--------------------CHHHHHHHHHH
Confidence 2456666664322110 011 1122 3333444322 33445544444
Q ss_pred HHHHHhccCCCCCcccccccccccccccCCcEEeeEEEeeeccCCCCCCCChHHHHHHHHHHHHHHhhcccCCCCccccc
Q 000065 1882 VDQQRASQSPDGSYDLKDSNGFLYEALSKELYVGNVYLRVYNDQPDFEITEPEAFCVALIDFISYLVHNQSATKSDVQGE 1961 (2462)
Q Consensus 1882 L~~q~~~~~~~~~w~l~~~~~f~Y~~l~~EL~VGGVYLRlfneqP~w~Lr~Pk~Fl~~LLdfl~~~~~~~~~~~~d~~~~ 1961 (2462)
|.... ..+. +... .+ .+ . .-+..|++.+... ..
T Consensus 423 L~~L~--~~~~------~~~~--------~i----------~~-~--------g~i~~Lv~lL~~~----~~-------- 455 (780)
T 2z6g_A 423 LSNLT--CNNY------KNKM--------MV----------CQ-V--------GGIEALVRTVLRA----GD-------- 455 (780)
T ss_dssp HHHHT--SSCH------HHHH--------HH----------HT-T--------THHHHHHHHHHHH----TT--------
T ss_pred HHHHH--hCCH------HHHH--------HH----------HH-C--------CCHHHHHHHHHcc----CC--------
Confidence 43221 0000 0000 00 00 0 0122233332210 00
Q ss_pred cccccccchhhhccccCCCCCCccccCCCCcccCccccccccccccccccccccCcchHHHHHHHHHHHHHHHHHHhhCc
Q 000065 1962 ESLDGLSSKIVQDKLSLDPSSSKTFELPSDATDSSMNERKVNDESLAVSDRKVTGKEDSVMIKNLQFGLTSLQNILTSNP 2041 (2462)
Q Consensus 1962 ~~~~~~~~~~~qd~~~~~~~~~~~~ev~~~~~~~~~~~~~l~~~s~~~s~~~~~~~~d~e~l~~l~maL~AL~nLL~~nP 2041 (2462)
..+. ...++.+|.|+-..++
T Consensus 456 ---------------------------------------------------------~~~v---~~~Al~aL~nL~~~~~ 475 (780)
T 2z6g_A 456 ---------------------------------------------------------REDI---TEPAICALRHLTSRHQ 475 (780)
T ss_dssp ---------------------------------------------------------CHHH---HHHHHHHHHHTTSSST
T ss_pred ---------------------------------------------------------HHHH---HHHHHHHHHHHHhcCc
Confidence 0011 3456777888765555
Q ss_pred cch---hcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHHhhC----------
Q 000065 2042 NLA---SIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQMLHYA---------- 2108 (2462)
Q Consensus 2042 ~la---~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL~~~---------- 2108 (2462)
... ..+...+.++.|..+|... ....+++.|..+|..++.+..+...+.... ++..|+.+|...
T Consensus 476 ~~~~~~~~v~~~~~l~~L~~lL~~~--~~~~v~~~A~~aL~nLa~~~~~~~~i~~~g-~i~~Lv~lL~~~~~~~~~~aa~ 552 (780)
T 2z6g_A 476 DAEMAQNAVRLHYGLPVVVKLLHPP--SHWPLIKATVGLIRNLALCPANHAPLREQG-AIPRLVQLLVRAHQDTQRRTSM 552 (780)
T ss_dssp THHHHHHHHHHTTCHHHHHHTTSTT--CCHHHHHHHHHHHHHHHSSHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHTTC-
T ss_pred hHHHHHHHHHHcCCHHHHHHHhcCC--ChHHHHHHHHHHHHHHhcCHHHHHHHHHCC-CHHHHHHHHHhcchhHHHHHhh
Confidence 422 2334456788899998754 123789999999999999888887777644 778888887541
Q ss_pred -------------cchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCCh
Q 000065 2109 -------------PACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGP 2175 (2462)
Q Consensus 2109 -------------p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGP 2175 (2462)
.+.+..++.+|..|+.+++......++|++..|+++|... ++.+|..++.+|+.|..+ +
T Consensus 553 al~nq~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~----~~~v~~~a~~aL~~L~~~----~ 624 (780)
T 2z6g_A 553 GGTQQQFVEGVRMEEIVEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSP----IENIQRVAAGVLCELAQD----K 624 (780)
T ss_dssp -----CCSTTCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCS----CHHHHHHHHHHHHHHHTS----H
T ss_pred ccccchhhcccChHHHHHHHHHHHHHHhcChhhHHHHHHCCcHHHHHHHHcCC----CHHHHHHHHHHHHHHhcC----H
Confidence 1223457788888887777776677899999999998753 578999999999999755 4
Q ss_pred HHHHHHHh
Q 000065 2176 RVAITLAR 2183 (2462)
Q Consensus 2176 rV~~~L~K 2183 (2462)
..+..+.+
T Consensus 625 ~~~~~i~~ 632 (780)
T 2z6g_A 625 EAAEAIEA 632 (780)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 45444443
No 50
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=97.63 E-value=0.0018 Score=80.32 Aligned_cols=301 Identities=14% Similarity=0.101 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCC-hhHHHHHHhhcchHHHHHHHH
Q 000065 2027 QFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTC-ASCLEAMVADGSSLLLLLQML 2105 (2462)
Q Consensus 2027 ~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n-~~CVeaiA~~~~vl~~Ll~lL 2105 (2462)
..+..+|.++...++.....+...+.++.|+.+|... ++.++..|+.+|..++.. ..+.+.+...+ ++..|+.++
T Consensus 83 ~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~---~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~-~i~~L~~~l 158 (450)
T 2jdq_A 83 FESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSE---FEDVQEQAVWALGNIAGDSTMCRDYVLDCN-ILPPLLQLF 158 (450)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHHTTCHHHHHHHHHTT-CHHHHHHHT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCC---CHHHHHHHHHHHHHHccCCHHHHHHHHHCC-CHHHHHHHh
Confidence 4578889998887766555555567788899998753 568999999999888865 45666666544 788899998
Q ss_pred hh--CcchHHHHHHHHHHhhcch-HHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHH
Q 000065 2106 HY--APACREGVLHVLYALASTP-ELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLA 2182 (2462)
Q Consensus 2106 ~~--~p~~~~~~L~~L~aL~s~t-~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~ 2182 (2462)
.. .++.+..++.+|..++... .-....+..|++..|+.++... ++.+|..++..|+.+..+. .+.......
T Consensus 159 ~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~----~~~v~~~a~~~L~~l~~~~--~~~~~~~~~ 232 (450)
T 2jdq_A 159 SKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVS----DTDVLADACWALSYLSDGP--NDKIQAVID 232 (450)
T ss_dssp TSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTTCC----CHHHHHHHHHHHHHHTSSS--HHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHccC----CHHHHHHHHHHHHHHHCCC--cHHHHHHHH
Confidence 74 3566777888998888542 1111222378888999988643 5789999999999998642 122322222
Q ss_pred hhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCccccccccCCCC
Q 000065 2183 RFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRDE 2262 (2462)
Q Consensus 2183 KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y~~l~~E 2262 (2462)
.=+-+. .+.++.+ . +.+.|......+..++.. . +...
T Consensus 233 ~~~i~~------------L~~ll~~--~------~~~v~~~a~~~L~~l~~~--------~-------~~~~-------- 269 (450)
T 2jdq_A 233 AGVCRR------------LVELLMH--N------DYKVVSPALRAVGNIVTG--------D-------DIQT-------- 269 (450)
T ss_dssp TTTHHH------------HHHHTTC--S------CHHHHHHHHHHHHHHTTS--------C-------HHHH--------
T ss_pred cCcHHH------------HHHHHCC--C------chhHHHHHHHHHHHHhhC--------C-------hHHH--------
Confidence 212222 3344431 1 234555555555544321 0 0000
Q ss_pred cEEeeeeehhhccCCCCCCCChHHHH-HHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCCh
Q 000065 2263 PQVGGIYVRLFLKDPKFPLRNPKRFL-EGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYV 2341 (2462)
Q Consensus 2263 l~VGGVYlRLFl~nP~w~LR~PK~FL-~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~l 2341 (2462)
+.++ .+++..++..+... +.++..-...++..+....+.....+-..|-+
T Consensus 270 ----------------------~~~~~~~~l~~L~~ll~~~-------~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l 320 (450)
T 2jdq_A 270 ----------------------QVILNCSALQSLLHLLSSP-------KESIKKEACWTISNITAGNRAQIQTVIDANIF 320 (450)
T ss_dssp ----------------------HHHHTTTHHHHHHHHTTCS-------SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHH
T ss_pred ----------------------HHHHHCccHHHHHHHHcCC-------CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCH
Confidence 0000 13556666666542 22233333445555555455555556667999
Q ss_pred HHHHHHHHhhccccccchhhhhcCCccccccccCCCCCCCCCCChhhHhhhhHHHHHHHhhC--ChhHHHHhhhccCCCC
Q 000065 2342 PKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAA--STTCAEAMAATSTGTP 2419 (2462)
Q Consensus 2342 pkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~--s~~Cv~ala~~~~~~~ 2419 (2462)
|.|+..|.+.+ +.+++.|...|..|+. +..+++.+.+..+
T Consensus 321 ~~L~~~l~~~~-----------------------------------~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~--- 362 (450)
T 2jdq_A 321 PALISILQTAE-----------------------------------FRTRKEAAWAITNATSGGSAEQIKYLVELGC--- 362 (450)
T ss_dssp HHHHHHHHHSC-----------------------------------HHHHHHHHHHHHHHHHHCCHHHHHHHHHHTC---
T ss_pred HHHHHHHhcCC-----------------------------------HHHHHHHHHHHHHHHcCCCHHHHHHHHHCCC---
Confidence 99999988532 3688999999999976 5567777776666
Q ss_pred cchHHHHHHhccCCcch--hHHHHHHHHHhcC
Q 000065 2420 QVVPILMKAIGWQGGSI--LALETLKRVVVAG 2449 (2462)
Q Consensus 2420 ~~v~~l~~a~~~~~~~~--~a~etl~r~~~~~ 2449 (2462)
+|+|...++.....+ .|+++|..++..+
T Consensus 363 --i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~ 392 (450)
T 2jdq_A 363 --IKPLCDLLTVMDSKIVQVALNGLENILRLG 392 (450)
T ss_dssp --HHHHHHGGGSSCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHhcCCCHHHHHHHHHHHHHHHHhc
Confidence 999999998753333 8899998888753
No 51
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=97.60 E-value=0.013 Score=75.57 Aligned_cols=137 Identities=11% Similarity=0.153 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhc-CChhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLT-TCASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls-~n~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
..-+..||.++...+++....+...+.++.|..+|... +..++..++.+|..++ .+......+...+ ++..|..+
T Consensus 268 ~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~---~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g-~l~~L~~L 343 (529)
T 3tpo_A 268 LADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGAT---ELPIVTPALRAIGNIVTGTDEQTQKVIDAG-ALAVFPSL 343 (529)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCS---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTT-GGGGHHHH
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCC---ChhHHHHHHHHHHHHHccchHHHHHHhhcc-cHHHHHHH
Confidence 34567889998888777666666678888999999754 5678899999997665 4666666676644 67788888
Q ss_pred HhhC-cchHHHHHHHHHHhhc-chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcC
Q 000065 2105 LHYA-PACREGVLHVLYALAS-TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQ 2170 (2462)
Q Consensus 2105 L~~~-p~~~~~~L~~L~aL~s-~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD 2170 (2462)
|... ++.+..+.-+|..++. +....+..+..|++..|+.+|... ...+|..||.+|..++..
T Consensus 344 L~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~----~~~v~~~A~~aL~nl~~~ 407 (529)
T 3tpo_A 344 LTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKA----DFKTQKAAAWAITNYTSG 407 (529)
T ss_dssp TTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSS----CHHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCC----CHHHHHHHHHHHHHHHcC
Confidence 8653 3445567788888876 556677778889999999998754 578999999999988763
No 52
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=97.58 E-value=0.0025 Score=81.82 Aligned_cols=303 Identities=9% Similarity=0.093 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCC-hhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTC-ASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n-~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
...+..+|.++...++.....+...+.++.|+.+|... +..++..|+.+|..++.. ..|...+...+ ++..|+.+
T Consensus 148 ~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~---~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~-~l~~L~~l 223 (530)
T 1wa5_B 148 QLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTG---SVEVKEQAIWALGNVAGDSTDYRDYVLQCN-AMEPILGL 223 (530)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHC---CHHHHHHHHHHHHHHHTTCHHHHHHHHHTT-CHHHHHHG
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCC---CHHHHHHHHHHHHHHhCCCccchHHHHHcC-cHHHHHHH
Confidence 35678899999988877766666678899999999753 567999999999888865 56776666544 78888888
Q ss_pred Hhh-CcchHHHHHHHHHHhhcch-HHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHH
Q 000065 2105 LHY-APACREGVLHVLYALASTP-ELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLA 2182 (2462)
Q Consensus 2105 L~~-~p~~~~~~L~~L~aL~s~t-~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~ 2182 (2462)
+.. .++.+..++.+|..|+... .........|++..|+.++... .+.+|..++.+|+.+... ..+.+...+.
T Consensus 224 l~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~----d~~v~~~a~~~L~~L~~~--~~~~~~~~~~ 297 (530)
T 1wa5_B 224 FNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSM----DTETLVDACWAISYLSDG--PQEAIQAVID 297 (530)
T ss_dssp GGSCCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCC----CHHHHHHHHHHHHHHHSS--CHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCC----CHHHHHHHHHHHHHHhCC--CHHHHHHHHh
Confidence 875 3355667888999988643 2233445688899999988653 478999999999999863 1122332222
Q ss_pred hhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCccccccccCCCC
Q 000065 2183 RFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRDE 2262 (2462)
Q Consensus 2183 KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y~~l~~E 2262 (2462)
. +--...+.++.+ . +.+.|......+..++.. . ++..
T Consensus 298 ~------------~~v~~Lv~lL~~--~------~~~v~~~a~~~L~~l~~~--------~------~~~~--------- 334 (530)
T 1wa5_B 298 V------------RIPKRLVELLSH--E------STLVQTPALRAVGNIVTG--------N------DLQT--------- 334 (530)
T ss_dssp T------------TCHHHHHHGGGC--S------CHHHHHHHHHHHHHHTTS--------C------HHHH---------
T ss_pred c------------CcHHHHHHHHCC--C------ChhhHHHHHHHHHHHHcC--------C------HHHH---------
Confidence 1 111234444432 1 234555555555544310 0 0000
Q ss_pred cEEeeeeehhhccCCCCCCCChHHHHHHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCChH
Q 000065 2263 PQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVP 2342 (2462)
Q Consensus 2263 l~VGGVYlRLFl~nP~w~LR~PK~FL~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~lp 2342 (2462)
..++ -.+++..++..+... +.++..-...++..|....+.....+...|.+|
T Consensus 335 --------~~~~-------------~~~~l~~L~~lL~~~-------~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~ 386 (530)
T 1wa5_B 335 --------QVVI-------------NAGVLPALRLLLSSP-------KENIKKEACWTISNITAGNTEQIQAVIDANLIP 386 (530)
T ss_dssp --------HHHH-------------HTTHHHHHHHHTTCS-------CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHH
T ss_pred --------HHHH-------------HcchHHHHHHHHcCC-------CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHH
Confidence 0000 013555566666542 233334445566666665666556666789999
Q ss_pred HHHHHHHhhccccccchhhhhcCCccccccccCCCCCCCCCCChhhHhhhhHHHHHHHhhCC--h--hHHHHhhhccCCC
Q 000065 2343 KLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAAS--T--TCAEAMAATSTGT 2418 (2462)
Q Consensus 2343 kl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~s--~--~Cv~ala~~~~~~ 2418 (2462)
.|+..|.+.+ +.++..|+..|..|+.. . .....+.+..+
T Consensus 387 ~L~~lL~~~~-----------------------------------~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~~-- 429 (530)
T 1wa5_B 387 PLVKLLEVAE-----------------------------------YKTKKEACWAISNASSGGLQRPDIIRYLVSQGC-- 429 (530)
T ss_dssp HHHHHHHHSC-----------------------------------HHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTC--
T ss_pred HHHHHHhcCC-----------------------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCCC--
Confidence 9999987532 36788999999999763 2 35556666556
Q ss_pred CcchHHHHHHhccCCcch--hHHHHHHHHHhcC
Q 000065 2419 PQVVPILMKAIGWQGGSI--LALETLKRVVVAG 2449 (2462)
Q Consensus 2419 ~~~v~~l~~a~~~~~~~~--~a~etl~r~~~~~ 2449 (2462)
+|+|...+......+ .|+++|..++..+
T Consensus 430 ---l~~L~~ll~~~~~~v~~~al~aL~~l~~~~ 459 (530)
T 1wa5_B 430 ---IKPLCDLLEIADNRIIEVTLDALENILKMG 459 (530)
T ss_dssp ---HHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhCCCHHHHHHHHHHHHHHHHhh
Confidence 999999988753333 8899999988753
No 53
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=97.52 E-value=0.011 Score=76.02 Aligned_cols=137 Identities=10% Similarity=0.147 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhc-CChhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLT-TCASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls-~n~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
...+..||.++...+++....+...+.++.|..+|... +..++..++..|..++ .+......+...+ ++..|..+
T Consensus 249 ~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~---~~~v~~~al~aL~nl~~~~~~~~~~i~~~g-~l~~L~~L 324 (510)
T 3ul1_B 249 LADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGAT---ELPIVTPALRAIGNIVTGTDEQTQKVIDAG-ALAVFPSL 324 (510)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCS---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTT-GGGGCC-C
T ss_pred HHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCC---ChhhhhHHHHHHHHhhcCCHHHHHHHhhcc-chHHHHHH
Confidence 45578889998887776655566677888899999764 5678899999997664 5556666666544 66777777
Q ss_pred HhhC-cchHHHHHHHHHHhhc-chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcC
Q 000065 2105 LHYA-PACREGVLHVLYALAS-TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQ 2170 (2462)
Q Consensus 2105 L~~~-p~~~~~~L~~L~aL~s-~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD 2170 (2462)
|... ++.+..+.-+|..++. +....+.....|++..|++++.+. +..+|..|+.+|..++..
T Consensus 325 L~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~----~~~v~~~Aa~aL~Nl~~~ 388 (510)
T 3ul1_B 325 LTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKA----DFKTQKEAAWAITNYTSG 388 (510)
T ss_dssp TTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSS----CHHHHHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCC----CHHHHHHHHHHHHHHHcc
Confidence 7643 3445567788888876 556777778889999999998754 578999999999998763
No 54
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=97.51 E-value=0.0043 Score=78.95 Aligned_cols=349 Identities=13% Similarity=0.120 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCC-hhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTC-ASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n-~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
...+..+|.++...++.....+...|.++.|..+|... +..++..|...|..++.. .++-..|.+.+ .++.|+.+
T Consensus 19 q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~---~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G-~i~~Lv~l 94 (457)
T 1xm9_A 19 QAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP---NQNVQQAAAGALRNLVFRSTTNKLETRRQN-GIREAVSL 94 (457)
T ss_dssp HHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSS---CHHHHHHHHHHHHHHHSSCHHHHHHHHHTT-CHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCC---CHHHHHHHHHHHHHHhcCCHHHHHHHHHcC-CHHHHHHH
Confidence 45688899999888888776677788999999999753 567899999999888865 88888888765 78999999
Q ss_pred Hh-h-CcchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhcC-------CC-----CCCcHHHHHHHHHHHHHHhcC
Q 000065 2105 LH-Y-APACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLP-------SQ-----QETPLQQRAAAASLLGKLVGQ 2170 (2462)
Q Consensus 2105 L~-~-~p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~~-------~~-----e~~~~~~R~~aA~lL~km~aD 2170 (2462)
|. . .++....+..+|..|+++++.-...++ |++..|+++|.. +. +.....+...++.+|..+..+
T Consensus 95 L~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~~ 173 (457)
T 1xm9_A 95 LRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSA 173 (457)
T ss_dssp HTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHHHHHHTTS
T ss_pred HhhCCCHHHHHHHHHHHHHHhcCHHhHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHHHHHHHHHHHHHccC
Confidence 97 3 356667788999999987665555666 999999999931 10 012345566899999999864
Q ss_pred CCCChHHHHHHHhh--CcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHH-------HHHHhc
Q 000065 2171 PMHGPRVAITLARF--LPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDL-------YREQMK 2241 (2462)
Q Consensus 2171 ~lhGPrV~~~L~Kf--LP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~~~~-------~~~Q~~ 2241 (2462)
|..+..+... .-+.++..|+++ ..+ --+++.........+..++... +..+..
T Consensus 174 ----~~~~~~i~~~~g~i~~Lv~lL~~~------------~~~--~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~ 235 (457)
T 1xm9_A 174 ----DAGRQTMRNYSGLIDSLMAYVQNC------------VAA--SRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEY 235 (457)
T ss_dssp ----HHHHHHHTTSTTHHHHHHHHHHHH------------HHH--TCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHH
T ss_pred ----HHHHHHHHHcCCCHHHHHHHHHhh------------ccc--cCCchHHHHHHHHHHHhcccchhccCcchhhhccc
Confidence 5554444421 122344444421 000 0000111111111111111000 000000
Q ss_pred CCcccccCCccccccccCCCCcEEeeeeehhhccCCCCCCCChHH----HHHHHHHHHHHHHhccCCCCCCCCCchHHHH
Q 000065 2242 GRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKR----FLEGLLDQYLSSIAATHYDTQAIDPELPLLL 2317 (2462)
Q Consensus 2242 ~~~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~nP~w~LR~PK~----FL~~Ll~~~~~~~~~~~~e~~~~d~~ll~ll 2317 (2462)
.....-+..+.............-+|.-+-+ |. .-++|+. +-.+.+..++..+.... ++++.+-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~l~~~~~l~~L~~lL~~~~------~~~~~e~a 304 (457)
T 1xm9_A 236 NARNAYTEKSSTGCFSNKSDKMMNNNYDCPL----PE-EETNPKGSGWLYHSDAIRTYLNLMGKSK------KDATLEAC 304 (457)
T ss_dssp TC----------------------------C----CC-CCSSCCGGGGGGSHHHHHHHHHHHHHCC------CHHHHHHH
T ss_pred ccccccccccccchhhccchhhhhccccCCc----cc-cccCchHHHHHhCcchHHHHHHHHhhcC------CHHHHHHH
Confidence 0000000000000000000000000000000 00 0012221 12456677777776532 23444544
Q ss_pred HHHHHHHHhcCchhhhh-----hccCCChHHHHHHHHhhccccccchhhhhcCCccccccccCCCCCCCCCCChhhHhhh
Q 000065 2318 SAALVSLLRVHPALADH-----VGYLGYVPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRL 2392 (2462)
Q Consensus 2318 t~A~v~LL~~qp~LaD~-----vp~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2392 (2462)
+-|+..|-..+.....+ |-..|.+|.|+++|.+.+ +.+++
T Consensus 305 ~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~Lv~LL~~~~-----------------------------------~~v~~ 349 (457)
T 1xm9_A 305 AGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN-----------------------------------SDVVR 349 (457)
T ss_dssp HHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTTCSC-----------------------------------HHHHH
T ss_pred HHHHHHhccCcCcchHHHHHHHHHHcCCchHHHHHHhCCC-----------------------------------HhHHH
Confidence 55666666544433322 235799999999987632 36889
Q ss_pred hHHHHHHHhhCChhHHHHhhhccCCCCcchHHHHHHhccCC-------cch-hHHHHHHHHHhcC
Q 000065 2393 SCLRVLHQLAASTTCAEAMAATSTGTPQVVPILMKAIGWQG-------GSI-LALETLKRVVVAG 2449 (2462)
Q Consensus 2393 s~l~vLh~Ls~s~~Cv~ala~~~~~~~~~v~~l~~a~~~~~-------~~~-~a~etl~r~~~~~ 2449 (2462)
.|...|..||.+.-..+.+.+ .+ ||+|..-+.... +.+ -+|.+|..++..+
T Consensus 350 ~A~~aL~nls~~~~~~~~i~~-~~-----i~~Lv~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~~ 408 (457)
T 1xm9_A 350 SGASLLSNMSRHPLLHRVMGN-QV-----FPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQ 408 (457)
T ss_dssp HHHHHHHHHHTSGGGHHHHHH-HT-----HHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCHHHHHHHHH-hh-----hHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHhcC
Confidence 999999999999988888875 35 888888887631 122 7889999988765
No 55
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=97.48 E-value=0.0079 Score=76.52 Aligned_cols=138 Identities=17% Similarity=0.100 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHhhCccch-----hcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLA-----SIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLL 2100 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la-----~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~ 2100 (2462)
.+-+.-||.|+-..+.... ..+...+.++.|..+|... +..+++.|...|+.++.+......|.+ + +++.
T Consensus 301 ~e~a~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~Lv~LL~~~---~~~v~~~A~~aL~nls~~~~~~~~i~~-~-~i~~ 375 (457)
T 1xm9_A 301 LEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG---NSDVVRSGASLLSNMSRHPLLHRVMGN-Q-VFPE 375 (457)
T ss_dssp HHHHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTTCS---CHHHHHHHHHHHHHHHTSGGGHHHHHH-H-THHH
T ss_pred HHHHHHHHHHhccCcCcchHHHHHHHHHHcCCchHHHHHHhCC---CHhHHHHHHHHHHHHhcCHHHHHHHHH-h-hhHH
Confidence 3556788888877654322 1233457788999999764 568999999999999999888777764 4 7888
Q ss_pred HHHHHhhC-c------chHHHHHHHHHHhhc-chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCC
Q 000065 2101 LLQMLHYA-P------ACREGVLHVLYALAS-TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQP 2171 (2462)
Q Consensus 2101 Ll~lL~~~-p------~~~~~~L~~L~aL~s-~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~ 2171 (2462)
|..+|... + +....++.+|..+.. +++..+...++||+..|.+++... .+..++..|+.+|..|-.++
T Consensus 376 Lv~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~~~~~~~~i~~~g~l~~L~~L~~~~---~~~~i~~~A~~~L~~~~~~~ 451 (457)
T 1xm9_A 376 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS---ASPKAAEAARLLLSDMWSSK 451 (457)
T ss_dssp HHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCT---TCHHHHHHHHHHHHTTSSST
T ss_pred HHHhccCCCCCCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHHcCC---CcHHHHHHHHHHHHHHHcch
Confidence 98888753 1 234457777777654 667888889999999999999764 25789999999999988754
No 56
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=97.37 E-value=0.0068 Score=82.16 Aligned_cols=338 Identities=13% Similarity=0.115 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHHhhCccchhccc-ccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCCh-------------------
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFS-TKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCA------------------- 2085 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~-s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~------------------- 2085 (2462)
...+..+|..|=. .|.+-.++. ..+-++.|+++|... +..++..|+.+|..++...
T Consensus 396 ~~~AveaLayLS~-~~~vk~~lv~d~g~Ip~LV~LL~s~---d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~ 471 (810)
T 3now_A 396 RRWAADGLAYLTL-DAECKEKLIEDKASIHALMDLARGG---NQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQH 471 (810)
T ss_dssp HHHHHHHHHHHTT-SHHHHHHHHHCHHHHHHHHHHHHTT---CGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCS
T ss_pred HHHHHHHHHHHhC-CcHHHHHHHHccchHHHHHHHhCCC---ChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhcc
Confidence 4567778877644 455555544 457899999999753 5678999999998888632
Q ss_pred --------------hHHHHHHhhcchHHHHHHHHhh-CcchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhcCCCC
Q 000065 2086 --------------SCLEAMVADGSSLLLLLQMLHY-APACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQ 2150 (2462)
Q Consensus 2086 --------------~CVeaiA~~~~vl~~Ll~lL~~-~p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~~~~e 2150 (2462)
.-++.|.+.+ +++.|..++.+ .|+....+..+|..++.+++.....+++|++..|+.+|.+.
T Consensus 472 v~~~~~ld~~~~v~~r~~~VveaG-aVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL~s~-- 548 (810)
T 3now_A 472 IPEEHELDDVDFINKRITVLANEG-ITTALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMALEG-- 548 (810)
T ss_dssp CCCSSCHHHHHHHHHHHHHHHHTT-HHHHHHHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHSS--
T ss_pred CccccccccHHHHHHHHHHHHHCc-CHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHccC--
Confidence 1135677655 88999999875 45677889999999999989999999999999999999754
Q ss_pred CCcHHHHHHHHHHHHHHhcCCCCChHHHH---HHHhhCcHHHHHHHhcCch-----hhHHHhhcccCcCcccccCHHHHH
Q 000065 2151 ETPLQQRAAAASLLGKLVGQPMHGPRVAI---TLARFLPDGLVSVIRDGPG-----EAVVSALEQTTETPELVWTPAMAA 2222 (2462)
Q Consensus 2151 ~~~~~~R~~aA~lL~km~aD~lhGPrV~~---~L~KfLP~~fvdamrdsp~-----~a~v~~fes~~EnPELIWn~~mR~ 2222 (2462)
.+..|..||..|+++..+ .-|.+.. .....+| .+++-+..+.. +| +-.+-.-...+ ++.|.
T Consensus 549 --~~~~k~~Aa~AL~nL~~~--~~p~~~~~~~~~~~aIp-pLv~LL~~~~~~l~~~eA-l~AL~NLa~~~-----d~~~~ 617 (810)
T 3now_A 549 --TEKGKRHATQALARIGIT--INPEVSFSGQRSLDVIR-PLLNLLQQDCTALENFES-LMALTNLASMN-----ESVRQ 617 (810)
T ss_dssp --CHHHHHHHHHHHHHHHHH--SCHHHHTTTHHHHHTHH-HHHHTTSTTSCHHHHHHH-HHHHHHHTTSC-----HHHHH
T ss_pred --CHHHHHHHHHHHHHHhcC--CChhhhhcchhhhcHHH-HHHHHhCCCCcHHHHHHH-HHHHHHHhcCC-----HHHHH
Confidence 467899999999999864 2233210 0112333 23444432211 11 11222222222 23343
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCcccccCCccccccccCCCCcEEeeeeehhhccCCCCCCCChHHHHHHHHHHHHHHHhc
Q 000065 2223 SLSAQISTMASDLYREQMK-GRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIAA 2301 (2462)
Q Consensus 2223 ~v~~~i~~~~~~~~~~Q~~-~~~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~nP~w~LR~PK~FL~~Ll~~~~~~~~~ 2301 (2462)
.+.+. .-...+...+.. ++.+. -....-+ ..+..+--....|+.+. +.+.-++.++..
T Consensus 618 ~Ii~a--G~l~~Lv~LL~s~~~~Vq------~~A~~~L-~NLa~~~~~~~~~v~~~------------g~l~~Lv~LL~s 676 (810)
T 3now_A 618 RIIKE--QGVSKIEYYLMEDHLYLT------RAAAQCL-CNLVMSEDVIKMFEGNN------------DRVKFLALLCED 676 (810)
T ss_dssp HHHHT--THHHHHHHHHHSCCTTHH------HHHHHHH-HHHTTSHHHHHHHHSSS------------SHHHHHHHGGGC
T ss_pred HHHHc--CCHHHHHHHHcCCCHHHH------HHHHHHH-HHHhCChHHHHHHHhcc------------CcHHHHHHHhcC
Confidence 33221 112222222221 11100 0000000 00000000111122111 355666666654
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhcc-CCChHHHHHHHHhhccccccchhhhhcCCccccccccCCCCCC
Q 000065 2302 THYDTQAIDPELPLLLSAALVSLLRVHPALADHVGY-LGYVPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSA 2380 (2462)
Q Consensus 2302 ~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~-lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2380 (2462)
. |.++..-.+.|+..|-...+.....+.. .|.+|.|+.+|.+.+
T Consensus 677 ~-------d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d---------------------------- 721 (810)
T 3now_A 677 E-------DEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPS---------------------------- 721 (810)
T ss_dssp S-------SHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSS----------------------------
T ss_pred C-------CHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCC----------------------------
Confidence 2 2233343455666555557888888888 899999999988642
Q ss_pred CCCCChhhHhhhhHHHHHHHhh-CChhHHHHhhhccCCCCcchHHHHHHhccC--Ccc--h-hHHHHHHHHHhcC
Q 000065 2381 QPVQTPQERVRLSCLRVLHQLA-ASTTCAEAMAATSTGTPQVVPILMKAIGWQ--GGS--I-LALETLKRVVVAG 2449 (2462)
Q Consensus 2381 ~~~~~~~~~~~~s~l~vLh~Ls-~s~~Cv~ala~~~~~~~~~v~~l~~a~~~~--~~~--~-~a~etl~r~~~~~ 2449 (2462)
+.+++.|+..|..|+ .+.-+++.|.+.++ +++|.+..+.. ++. + .|.|+|+.+++-|
T Consensus 722 -------~~vq~~A~~aL~NL~~~s~e~~~~l~e~G~-----i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~g 784 (810)
T 3now_A 722 -------PAVQHRGIVIILNMINAGEEIAKKLFETDI-----MELLSGLGQLPDDTRAKAREVATQCLAAAERYR 784 (810)
T ss_dssp -------HHHHHHHHHHHHHHHTTCHHHHHHHHTSTH-----HHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHhCCHHHHHHHHHCCC-----HHHHHHHHhCcccCcHHHHHHHHHHHHHHHhCC
Confidence 357788888887776 46789999999998 99999887643 222 3 8999999998754
No 57
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=97.26 E-value=0.055 Score=69.25 Aligned_cols=311 Identities=14% Similarity=0.078 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHhhCccchhcccccC----------ChhhhhcccCCCCC--C--CCChhh-------HHHHHHHHhcCC
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKE----------KLLPLFECFSVPFA--P--DSNIPQ-------LCLNVLSLLTTC 2084 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~----------~L~~Lf~~L~~~~~--~--~~~vq~-------~aL~VL~~ls~n 2084 (2462)
..-+..||.|+...+|+.-....-.+ +...++.++..... + ...++. .|+-.|..++.+
T Consensus 99 ~~~a~~al~ni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qAv~aL~nls~~ 178 (458)
T 3nmz_A 99 RARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFD 178 (458)
T ss_dssp HHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCSCC--CCCTTTTHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhhHHHHHHHHhhccccccccCCccchhhHHHHHHHHHHHHhcCC
Confidence 45678999999999998543321111 12334555654320 0 011332 788889999999
Q ss_pred hhHHHHHHhhcchHHHHHHHHhh------------CcchHHHHHHHHHHhhcchHHHHHHH-HcCC-HhhhHHhhcCCCC
Q 000065 2085 ASCLEAMVADGSSLLLLLQMLHY------------APACREGVLHVLYALASTPELAWAAA-KHGG-VVYILELLLPSQQ 2150 (2462)
Q Consensus 2085 ~~CVeaiA~~~~vl~~Ll~lL~~------------~p~~~~~~L~~L~aL~s~t~lvkqal-~~Gg-vlyLL~LL~~~~e 2150 (2462)
.+|-..|...+ .+..|+.+|.. .++....+..+|..|+..+.-.+..+ ..|| +..|+.+|...
T Consensus 179 ~e~R~~i~~~G-~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~-- 255 (458)
T 3nmz_A 179 EEHRHAMNELG-GLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSE-- 255 (458)
T ss_dssp HHHHHHHHHTT-HHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCS--
T ss_pred HHHHHHHHHCC-CHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhCC--
Confidence 99999998866 78888888842 23445568888999998777666666 4566 88999998742
Q ss_pred CCcHHHHHHHHHHHHHHhcCCCCChHHHHHHHhhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHH
Q 000065 2151 ETPLQQRAAAASLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQIST 2230 (2462)
Q Consensus 2151 ~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~ 2230 (2462)
++.+++.++.+|.-+... ..+..+..+.. .+.-...|.++-.. .+ .+++......+.+
T Consensus 256 --~~~v~~~A~~aL~nLs~~--~~~~~k~~I~~-----------~GaI~~LV~lLl~s-~~------~~v~~~A~~aL~n 313 (458)
T 3nmz_A 256 --SEDLQQVIASVLRNLSWR--ADVNSKKTLRE-----------VGSVKALMECALEV-KK------ESTLKSVLSALWN 313 (458)
T ss_dssp --CHHHHHHHHHHHHHHTSS--CCHHHHHHHHH-----------TTHHHHHHHHHTTC-CS------HHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHhcC--CCHHHHHHHHH-----------cCCHHHHHHHHhcC-CC------HHHHHHHHHHHHH
Confidence 578999999999998642 12443332222 11111233332111 11 2333444444444
Q ss_pred HHHH--HHHHHhcCCcccccCCccccccccCCCCcEEeeeeehhhccCCCCCCCChHHHHHHHHHHHHHHHhccCCCCCC
Q 000065 2231 MASD--LYREQMKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIAATHYDTQA 2308 (2462)
Q Consensus 2231 ~~~~--~~~~Q~~~~~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~nP~w~LR~PK~FL~~Ll~~~~~~~~~~~~e~~~ 2308 (2462)
++.. -.+.+ +. . -.|.+..++..+...+.. +
T Consensus 314 Ls~~~~~nk~~-------------I~--------------------~------------~~Gal~~Lv~LL~~~~~~-~- 346 (458)
T 3nmz_A 314 LSAHCTENKAD-------------IC--------------------A------------VDGALAFLVGTLTYRSQT-N- 346 (458)
T ss_dssp HHHHCHHHHHH-------------HH--------------------H------------STTHHHHHHHHTTCCCSS-S-
T ss_pred HccCCHHHHHH-------------HH--------------------H------------hcCcHHHHHHHhcCCCCc-c-
Confidence 4331 00111 00 0 012233344444332110 0
Q ss_pred CCCchHHHHHHHHHHHHh---cCchhhhhhccCCChHHHHHHHHhhccccccchhhhhcCCccccccccCCCCCCCCCCC
Q 000065 2309 IDPELPLLLSAALVSLLR---VHPALADHVGYLGYVPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQT 2385 (2462)
Q Consensus 2309 ~d~~ll~llt~A~v~LL~---~qp~LaD~vp~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2385 (2462)
+.++.+-.+.++..|-. ..+.-...+...|.+|.|+.+|.+.+
T Consensus 347 -~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~--------------------------------- 392 (458)
T 3nmz_A 347 -TLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHS--------------------------------- 392 (458)
T ss_dssp -TTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSC---------------------------------
T ss_pred -hHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCC---------------------------------
Confidence 01233333444444443 46777778888999999999986421
Q ss_pred hhhHhhhhHHHHHHHhh-CChhHHHHhhhccCCCCcchHHHHHHhccCCcch--hHHHHHHHHHhcC
Q 000065 2386 PQERVRLSCLRVLHQLA-ASTTCAEAMAATSTGTPQVVPILMKAIGWQGGSI--LALETLKRVVVAG 2449 (2462)
Q Consensus 2386 ~~~~~~~s~l~vLh~Ls-~s~~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~--~a~etl~r~~~~~ 2449 (2462)
..+++.|...|..|+ .+..+.+.|.+..+ ||+|.+-++.....+ .|+.+|..+...+
T Consensus 393 --~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~-----I~~Lv~LL~s~~~~v~~~Aa~AL~nL~~~~ 452 (458)
T 3nmz_A 393 --LTIVSNACGTLWNLSARNPKDQEALWDMGA-----VSMLKNLIHSKHKMIAMGSAAALRNLMANR 452 (458)
T ss_dssp --HHHHHHHHHHHHHHHSSCHHHHHHHHHHTH-----HHHHHTTTTCSSHHHHHHHHHHHHHHHTCC
T ss_pred --hHHHHHHHHHHHHHHcCCHHHHHHHHHCCC-----HHHHHHHHhCCCHHHHHHHHHHHHHHHcCC
Confidence 257789999999999 68899999998888 999999987654443 9999999999863
No 58
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=97.23 E-value=0.012 Score=77.38 Aligned_cols=329 Identities=16% Similarity=0.130 Sum_probs=204.2
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcC--ChhHHHHHHhhcchHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTT--CASCLEAMVADGSSLLLLLQ 2103 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~--n~~CVeaiA~~~~vl~~Ll~ 2103 (2462)
...+..+|.++-..++.....+...|.+++|..+|... +..++..|...|..|+. +.++-.+|.+.+ .++.|+.
T Consensus 65 q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~---~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~G-aIp~LV~ 140 (584)
T 3l6x_A 65 KSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHP---KKEVHLGACGALKNISFGRDQDNKIAIKNCD-GVPALVR 140 (584)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCS---SHHHHHHHHHHHHHHTSSSCHHHHHHHHHTT-HHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCC---CHHHHHHHHHHHHHHHccCCHHHHHHHHHcC-CHHHHHH
Confidence 34577889999888888777778889999999999764 56899999999999997 588888898866 8899999
Q ss_pred HHhhCc--chHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhc-----CC---------CCCCcHHHHHHHHHHHHHH
Q 000065 2104 MLHYAP--ACREGVLHVLYALASTPELAWAAAKHGGVVYILELLL-----PS---------QQETPLQQRAAAASLLGKL 2167 (2462)
Q Consensus 2104 lL~~~p--~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~-----~~---------~e~~~~~~R~~aA~lL~km 2167 (2462)
+|.+.+ +....+..+|..|+++++. +..+..||+..|++++. .. .......++..++.+|.-|
T Consensus 141 LL~s~~~~~~~e~aa~aL~nLS~~~~~-k~~I~~~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa~~L~NL 219 (584)
T 3l6x_A 141 LLRKARDMDLTEVITGTLWNLSSHDSI-KMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNV 219 (584)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHTTSGGG-HHHHHHHTHHHHHHHTHHHHHCCC----------CCCCHHHHHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHHhCCchh-hHHHHhccHHHHHHHHhcccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 998643 4456677888999886654 34444678988988761 10 0112468899999999999
Q ss_pred hcCCCCChHHHHHHHhh--CcHHHHHHHhcC-----ch----hhHHHhh-----cc------------------------
Q 000065 2168 VGQPMHGPRVAITLARF--LPDGLVSVIRDG-----PG----EAVVSAL-----EQ------------------------ 2207 (2462)
Q Consensus 2168 ~aD~lhGPrV~~~L~Kf--LP~~fvdamrds-----p~----~a~v~~f-----es------------------------ 2207 (2462)
.. +++..+..+.+. +.+.++..++.. +. +-++-.| .-
T Consensus 220 s~---~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~NLs~~~~~e~~~~~~~~~~~~~~~~~~~~~ 296 (584)
T 3l6x_A 220 SS---ERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGTS 296 (584)
T ss_dssp TS---SCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC--------------C
T ss_pred hc---CCHHHHHHHHHcCCcHHHHHHHHHHhhcccCccHHHHHHHHHHHHHhhccccccccchhhhhhhccccccccccc
Confidence 87 444444444332 334455555431 11 1111111 00
Q ss_pred cCcCcccccCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCccccccccCCCCcEEeeeeehhhccC--------CCC
Q 000065 2208 TTETPELVWTPAMAASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKD--------PKF 2279 (2462)
Q Consensus 2208 ~~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~n--------P~w 2279 (2462)
..+--|++|....=. +||+|+-.. =.|
T Consensus 297 ~~~Gve~L~~~~~v~---------------------------------------------~Ll~LL~~s~~~~v~E~Aa~ 331 (584)
T 3l6x_A 297 PARGYELLFQPEVVR---------------------------------------------IYISLLKESKTPAILEASAG 331 (584)
T ss_dssp CCCGGGGGGSHHHHH---------------------------------------------HHHHHHHHCCCHHHHHHHHH
T ss_pred CchhHHHHhcccHHH---------------------------------------------HHHHHHccCCCHHHHHHHHH
Confidence 011123333332111 122222110 001
Q ss_pred CCCC--------hHH---HH--HHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCChHHHHH
Q 000065 2280 PLRN--------PKR---FL--EGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKLVA 2346 (2462)
Q Consensus 2280 ~LR~--------PK~---FL--~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~lpkl~~ 2346 (2462)
.|+| +.. .+ .+.+..++.++...+ .+++.-...|+..| ...+...+.| ..|-+|+|+.
T Consensus 332 AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s~~-------~~v~~~A~~aL~nL-s~~~~~~~~I-~~g~ip~LV~ 402 (584)
T 3l6x_A 332 AIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEH-------ERVVKAASGALRNL-AVDARNKELI-GKHAIPNLVK 402 (584)
T ss_dssp HHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGCSC-------HHHHHHHHHHHHHH-HTTCSCHHHH-HHHHHHHHHH
T ss_pred HHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHcCCC-------HHHHHHHHHHHHHH-hCChhHHHHH-HhCCHHHHHH
Confidence 1110 001 11 345666777776531 23444445555554 4466777777 5789999999
Q ss_pred HHHhhccccccchhhhhcCCccccccccCCCCCCCCCCChhhHhhhhHHHHHHHh-hCChhHHHHhhhccCCCCcchHHH
Q 000065 2347 AVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQL-AASTTCAEAMAATSTGTPQVVPIL 2425 (2462)
Q Consensus 2347 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~L-s~s~~Cv~ala~~~~~~~~~v~~l 2425 (2462)
+|.+.+. ++. ..-.+.+...|+..||.| +.+....+++.+..+ ||+|
T Consensus 403 LL~~~~~-------~~~--------------------~~~s~~v~~~a~~tL~NL~a~~~~~~~~I~~~g~-----I~~L 450 (584)
T 3l6x_A 403 NLPGGQQ-------NSS--------------------WNFSEDTVISILNTINEVIAENLEAAKKLRETQG-----IEKL 450 (584)
T ss_dssp TSSSSSC-------SGG--------------------GTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTH-----HHHH
T ss_pred HhcCCcc-------ccc--------------------ccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCC-----hHHH
Confidence 9886421 000 001135667899999877 578999999998888 9999
Q ss_pred HHHhccC--Ccch--hHHHHHHHHHhc
Q 000065 2426 MKAIGWQ--GGSI--LALETLKRVVVA 2448 (2462)
Q Consensus 2426 ~~a~~~~--~~~~--~a~etl~r~~~~ 2448 (2462)
..-.+.. ...+ .|+=+|..|...
T Consensus 451 v~LL~s~~~~~~v~k~Aa~vL~nl~~~ 477 (584)
T 3l6x_A 451 VLINKSGNRSEKEVRAAALVLQTIWGY 477 (584)
T ss_dssp HHHHTCSSSCHHHHHHHHHHHHHHHTS
T ss_pred HHHHhCCCCChHHHHHHHHHHHHHHcC
Confidence 9888764 2223 888888877653
No 59
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=97.21 E-value=0.0065 Score=67.83 Aligned_cols=177 Identities=20% Similarity=0.210 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhc-CChhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLT-TCASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls-~n~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
...++.+|.++-..++.....+...+.++.|..+|... +..++..|+.+|..++ .+..+.+.+...+ .+..|+.+
T Consensus 29 ~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~---~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g-~i~~L~~l 104 (210)
T 4db6_A 29 LQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSP---NEQILQEALWALSNIASGGNEQIQAVIDAG-ALPALVQL 104 (210)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTT-CHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCC---CHHHHHHHHHHHHHHhcCCcHHHHHHHHCC-CHHHHHHH
Confidence 45688899999888888777777778899999999764 5689999999999998 5778888787655 78889888
Q ss_pred Hhh-CcchHHHHHHHHHHhhc-chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHH
Q 000065 2105 LHY-APACREGVLHVLYALAS-TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLA 2182 (2462)
Q Consensus 2105 L~~-~p~~~~~~L~~L~aL~s-~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~ 2182 (2462)
|.. .++.+..++.+|..++. +++..+..+..|++..|++++... ++.+|..++.+|..+..+ ++..+..+.
T Consensus 105 L~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~----~~~v~~~a~~aL~~l~~~---~~~~~~~~~ 177 (210)
T 4db6_A 105 LSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP----NEQILQEALWALSNIASG---GNEQKQAVK 177 (210)
T ss_dssp TTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS----CHHHHHHHHHHHHHHHTS---CHHHHHHHH
T ss_pred HcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCC----CHHHHHHHHHHHHHHHcC---CcHHHHHHH
Confidence 875 34566778889999985 556677788999999999999753 578999999999999763 344332221
Q ss_pred hhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHH
Q 000065 2183 RFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMA 2232 (2462)
Q Consensus 2183 KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~ 2232 (2462)
. .+.-...++++.+ + +.+.|......+..++
T Consensus 178 ~-----------~g~i~~L~~ll~~--~------~~~v~~~a~~aL~~l~ 208 (210)
T 4db6_A 178 E-----------AGALEKLEQLQSH--E------NEKIQKEAQEALEKLQ 208 (210)
T ss_dssp H-----------TTHHHHHHHGGGC--S------CHHHHHHHHHHHHHHC
T ss_pred H-----------CCCHHHHHHHHhC--C------CHHHHHHHHHHHHHHh
Confidence 1 2222334455542 2 4456777777766654
No 60
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.15 E-value=0.00021 Score=87.72 Aligned_cols=46 Identities=30% Similarity=0.560 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCc------hHHHHHHHHHHHHHhhccccC
Q 000065 1539 NIDEEKLKRQYRKLAMKYHPDKNPE------GREKFLAVQKAYERLQATMQG 1584 (2462)
Q Consensus 1539 ~a~e~~IKkAYRkLa~k~HPDKnp~------a~ekF~~I~~AYEvLsd~~~r 1584 (2462)
.++.++++++|+++++++|||+.++ ++++|+.|++||++|+|++.|
T Consensus 393 ~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r 444 (450)
T 2y4t_A 393 NAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMR 444 (450)
T ss_dssp TCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC
T ss_pred cCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 5677899999999999999999874 577999999999999998733
No 61
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=97.12 E-value=0.11 Score=66.42 Aligned_cols=137 Identities=17% Similarity=0.116 Sum_probs=94.9
Q ss_pred HHHHHHHHHhhCccchhccc-ccCChhhhhcccCCCCCCC-CChhhHHHHHHHHhc----CChhHHHHHHhhcchHHHHH
Q 000065 2029 GLTSLQNILTSNPNLASIFS-TKEKLLPLFECFSVPFAPD-SNIPQLCLNVLSLLT----TCASCLEAMVADGSSLLLLL 2102 (2462)
Q Consensus 2029 aL~AL~nLL~~nP~la~~~~-s~~~L~~Lf~~L~~~~~~~-~~vq~~aL~VL~~ls----~n~~CVeaiA~~~~vl~~Ll 2102 (2462)
++.||.|+-..+++....+. ..|.++.|..+|....... ..++..|.-+|..++ .+.+..+.|...+ .+..|+
T Consensus 307 A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G-~i~~Lv 385 (458)
T 3nmz_A 307 VLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENN-CLQTLL 385 (458)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTT-HHHHHH
T ss_pred HHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcc-cHHHHH
Confidence 34455555443433333332 4456666666665431110 137777888887777 5888888888755 788898
Q ss_pred HHHhhC-cchHHHHHHHHHHhh-cchHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcC
Q 000065 2103 QMLHYA-PACREGVLHVLYALA-STPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQ 2170 (2462)
Q Consensus 2103 ~lL~~~-p~~~~~~L~~L~aL~-s~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD 2170 (2462)
.+|... .+....+.-+|..|+ .+++-.+..++.|++..|.++|... ...+|..|+.+|..+..+
T Consensus 386 ~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~s~----~~~v~~~Aa~AL~nL~~~ 451 (458)
T 3nmz_A 386 QHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSK----HKMIAMGSAAALRNLMAN 451 (458)
T ss_dssp HHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHTTTTCS----SHHHHHHHHHHHHHHHTC
T ss_pred HHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhCC----CHHHHHHHHHHHHHHHcC
Confidence 888753 344566888899998 4678888889999999999998643 578899999999999875
No 62
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=97.02 E-value=0.0045 Score=71.01 Aligned_cols=137 Identities=20% Similarity=0.194 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcC-ChhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTT-CASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~-n~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
...++.+|.+++..++.....+...+.++.|+.+|... +..++..|+.+|..++. +.++.+.+...+ .+..|+.+
T Consensus 29 ~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~---~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g-~i~~L~~l 104 (252)
T 4db8_A 29 QLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSP---NEQILQEALWALSNIASGGNEQIQAVIDAG-ALPALVQL 104 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCS---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTT-HHHHHHHG
T ss_pred HHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCC---CHHHHHHHHHHHHHHhcCCHHHHHHHHHcC-CHHHHHHH
Confidence 35678888888876555555566678889999999764 46799999999999986 788888887755 78888888
Q ss_pred Hhh-CcchHHHHHHHHHHhhcchHHH-HHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcC
Q 000065 2105 LHY-APACREGVLHVLYALASTPELA-WAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQ 2170 (2462)
Q Consensus 2105 L~~-~p~~~~~~L~~L~aL~s~t~lv-kqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD 2170 (2462)
|.. .++.+..++.+|..++..++.. ....+.|++..|+++|... ++.+|..++.+|+.+...
T Consensus 105 L~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~----~~~v~~~a~~~L~~l~~~ 168 (252)
T 4db8_A 105 LSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP----NEQILQEALWALSNIASG 168 (252)
T ss_dssp GGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS----CHHHHHHHHHHHHHHTTS
T ss_pred HcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCC----CHHHHHHHHHHHHHHHcC
Confidence 875 3456677999999999877766 7888999999999999653 578999999999999864
No 63
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.95 E-value=0.0079 Score=68.35 Aligned_cols=137 Identities=17% Similarity=0.233 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCC-hhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTC-ASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n-~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
...++.+|.++...++.....+...+.++.|..+|... +..++..++.+|..++.+ ..+.+.+.+.+ .+..|+.+
T Consensus 19 ~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~---~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~-~i~~l~~l 94 (252)
T 4hxt_A 19 QKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTST---DSEVQKEAARALANIASGPDEAIKAIVDAG-GVEVLVKL 94 (252)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTT-HHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCC---CHHHHHHHHHHHHHHHcCChHHHHHHHHCC-CHHHHHHH
Confidence 45678999999999987666677778899999999764 468999999999999987 88888887655 78888888
Q ss_pred Hhh-CcchHHHHHHHHHHhh-cchHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcC
Q 000065 2105 LHY-APACREGVLHVLYALA-STPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQ 2170 (2462)
Q Consensus 2105 L~~-~p~~~~~~L~~L~aL~-s~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD 2170 (2462)
|.. .++.+..++.+|..++ .+++......+.|++..|++++... ++.+|..++.+|+.|..+
T Consensus 95 l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~----~~~~~~~a~~~L~~l~~~ 158 (252)
T 4hxt_A 95 LTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST----DSEVQKEAARALANIASG 158 (252)
T ss_dssp TTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS----CHHHHHHHHHHHHHHTTS
T ss_pred HcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCC----CHHHHHHHHHHHHHHHcC
Confidence 875 3456677999999999 5777888888999999999998753 578999999999999764
No 64
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=96.91 E-value=0.0055 Score=68.43 Aligned_cols=136 Identities=24% Similarity=0.222 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhc-CChhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLT-TCASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls-~n~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
...++.+|.|+...++.....+...+.++.|+.+|... +..++..|..+|..++ .+..+.+.+...+ ++..|+.+
T Consensus 71 ~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~---~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~-~i~~L~~l 146 (210)
T 4db6_A 71 LQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP---NEQILQEALWALSNIASGGNEQIQAVIDAG-ALPALVQL 146 (210)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCS---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTT-HHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCC---cHHHHHHHHHHHHHHHcCCHHHHHHHHHcC-cHHHHHHH
Confidence 45688899999988888877777888999999999764 5678999999998888 5677777777644 78889988
Q ss_pred Hhh-CcchHHHHHHHHHHhhcc-hHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhc
Q 000065 2105 LHY-APACREGVLHVLYALAST-PELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVG 2169 (2462)
Q Consensus 2105 L~~-~p~~~~~~L~~L~aL~s~-t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~a 2169 (2462)
|.. .++.+..++.+|..++.. ++........|++..|++++... ++.+|..|+.+|+.+..
T Consensus 147 l~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~----~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 147 LSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHE----NEKIQKEAQEALEKLQS 209 (210)
T ss_dssp TTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCS----CHHHHHHHHHHHHHHCC
T ss_pred HcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHhCC----CHHHHHHHHHHHHHHhc
Confidence 875 345667788999999876 66777778889999999998753 67899999999998864
No 65
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=96.86 E-value=0.076 Score=69.81 Aligned_cols=138 Identities=14% Similarity=0.124 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHhhCcc----chhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHH
Q 000065 2026 LQFGLTSLQNILTSNPN----LASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLL 2101 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~----la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~L 2101 (2462)
++-+..||.||-..+.. ....+...+.++.|..+|... +..++..+...|..|+.....-+.|. ..+++.|
T Consensus 326 ~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s~---~~~v~~~A~~aL~nLs~~~~~~~~I~--~g~ip~L 400 (584)
T 3l6x_A 326 LEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNE---HERVVKAASGALRNLAVDARNKELIG--KHAIPNL 400 (584)
T ss_dssp HHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGCS---CHHHHHHHHHHHHHHHTTCSCHHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHcCC---CHHHHHHHHHHHHHHhCChhHHHHHH--hCCHHHH
Confidence 45667788888665421 111233345688889998654 45788999999988886655445553 3478888
Q ss_pred HHHHhhC---------cchHHHHHHHHHHhhc-chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcC
Q 000065 2102 LQMLHYA---------PACREGVLHVLYALAS-TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQ 2170 (2462)
Q Consensus 2102 l~lL~~~---------p~~~~~~L~~L~aL~s-~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD 2170 (2462)
+.+|... .+....++.+|..++. +++-.+..++.||+..|.+++.+.. ..+.++..|+.+|.-|..+
T Consensus 401 V~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~~~~~~~~I~~~g~I~~Lv~LL~s~~--~~~~v~k~Aa~vL~nl~~~ 477 (584)
T 3l6x_A 401 VKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGN--RSEKEVRAAALVLQTIWGY 477 (584)
T ss_dssp HHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTCSS--SCHHHHHHHHHHHHHHHTS
T ss_pred HHHhcCCcccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCC--CChHHHHHHHHHHHHHHcC
Confidence 8888643 1335568888887764 6777888899999999999997642 2567888899999999875
No 66
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=96.83 E-value=0.24 Score=61.34 Aligned_cols=147 Identities=16% Similarity=0.097 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHhhCccchhccc-ccCChhhhhcccCCCCCC-CCChhhHHHHHHHHhc----CChhHHHHHHhhcchHHH
Q 000065 2027 QFGLTSLQNILTSNPNLASIFS-TKEKLLPLFECFSVPFAP-DSNIPQLCLNVLSLLT----TCASCLEAMVADGSSLLL 2100 (2462)
Q Consensus 2027 ~maL~AL~nLL~~nP~la~~~~-s~~~L~~Lf~~L~~~~~~-~~~vq~~aL~VL~~ls----~n~~CVeaiA~~~~vl~~ 2100 (2462)
+.++.||.||-..+++....+. ..|.++.|..+|...... ...++..|.-+|..++ .+.+..+.|.+.+ .+..
T Consensus 189 ~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g-~i~~ 267 (354)
T 3nmw_A 189 KSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENN-CLQT 267 (354)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTT-HHHH
T ss_pred HHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcC-CHHH
Confidence 4567788888775655544444 578888899999654211 1147888888888777 4888888888755 7888
Q ss_pred HHHHHhhC-cchHHHHHHHHHHhhc-chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHH
Q 000065 2101 LLQMLHYA-PACREGVLHVLYALAS-TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVA 2178 (2462)
Q Consensus 2101 Ll~lL~~~-p~~~~~~L~~L~aL~s-~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~ 2178 (2462)
|+.+|... .+....+.-+|..|+. +++-.+..++.|++..|.++|... ...+|..|+.+|..+..+ ...+.+
T Consensus 268 Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~----~~~i~~~A~~aL~nL~~~--~~~~~~ 341 (354)
T 3nmw_A 268 LLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSK----HKMIAMGSAAALRNLMAN--RPAKYK 341 (354)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCS----SHHHHHHHHHHHHHHHTT--CCGGGC
T ss_pred HHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhCC----CHHHHHHHHHHHHHHHcC--CHHHHh
Confidence 99888753 3445668889999984 677888889999999999998653 578899999999999876 444444
Q ss_pred HH
Q 000065 2179 IT 2180 (2462)
Q Consensus 2179 ~~ 2180 (2462)
.+
T Consensus 342 ~~ 343 (354)
T 3nmw_A 342 DA 343 (354)
T ss_dssp --
T ss_pred hh
Confidence 33
No 67
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=96.80 E-value=0.25 Score=61.16 Aligned_cols=262 Identities=13% Similarity=0.060 Sum_probs=168.0
Q ss_pred hHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHHhh------------CcchHHHHHHHHHHhhcchHHHHHHH-HcCC-
Q 000065 2072 QLCLNVLSLLTTCASCLEAMVADGSSLLLLLQMLHY------------APACREGVLHVLYALASTPELAWAAA-KHGG- 2137 (2462)
Q Consensus 2072 ~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL~~------------~p~~~~~~L~~L~aL~s~t~lvkqal-~~Gg- 2137 (2462)
..|+..|..++.+.+|-..|.+.+ .+..|+.+|.. .++....+..+|..|+..+.-.+..+ ..||
T Consensus 50 ~~A~~aL~nls~d~e~R~~i~~~G-~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~~i~~~~Ga 128 (354)
T 3nmw_A 50 CPAVCVLMKLSFDEEHRHAMNELG-GLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGC 128 (354)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHTT-HHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHcC-CHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCc
Confidence 467899999999999999999866 77888888842 23455568888999997766566665 4666
Q ss_pred HhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHHh--hCcHHHHHHHhcCchhhHHHhhcccCcCcccc
Q 000065 2138 VVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLAR--FLPDGLVSVIRDGPGEAVVSALEQTTETPELV 2215 (2462)
Q Consensus 2138 vlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~K--fLP~~fvdamrdsp~~a~v~~fes~~EnPELI 2215 (2462)
+..|+.+|... ++.++..++.+|.-+... ..++.+..+.+ -+| .+++.+..++ +
T Consensus 129 Ip~LV~LL~s~----~~~v~~~A~~aL~nLs~~--~~~~~k~~i~~~G~Ip-~Lv~lL~~~~-------------~---- 184 (354)
T 3nmw_A 129 MRALVAQLKSE----SEDLQQVIASVLRNLSWR--ADVNSKKTLREVGSVK-ALMECALEVK-------------K---- 184 (354)
T ss_dssp HHHHHHGGGCS----CHHHHHHHHHHHHHHHTT--CCHHHHHHHHHTTHHH-HHHHHHHHCC-------------C----
T ss_pred HHHHHHHHCCC----CHHHHHHHHHHHHHHhcc--CCHHHHHHHHHCCCHH-HHHHHHhcCC-------------C----
Confidence 88999998742 578999999999998653 23443333222 122 2233222211 1
Q ss_pred cCHHHHHHHHHHHHHHHHH--HHHHHhcCCcccccCCccccccccCCCCcEEeeeeehhhccCCCCCCCChHHHHHHHHH
Q 000065 2216 WTPAMAASLSAQISTMASD--LYREQMKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLD 2293 (2462)
Q Consensus 2216 Wn~~mR~~v~~~i~~~~~~--~~~~Q~~~~~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~nP~w~LR~PK~FL~~Ll~ 2293 (2462)
.+++......+.+++.. -.+.+ ++ . -.|.+.
T Consensus 185 --~~~~~~A~~aL~nLs~~~~~nk~~-----------------------i~----------~------------~~Gai~ 217 (354)
T 3nmw_A 185 --ESTLKSVLSALWNLSAHCTENKAD-----------------------IC----------A------------VDGALA 217 (354)
T ss_dssp --HHHHHHHHHHHHHHHTTCHHHHHH-----------------------HH----------H------------STTHHH
T ss_pred --HHHHHHHHHHHHHHHccChhhhHH-----------------------HH----------H------------hcCcHH
Confidence 12333333344333320 00000 00 0 013445
Q ss_pred HHHHHHhccCCCCCCCCCchHHHHHHHHHHHHh---cCchhhhhhccCCChHHHHHHHHhhccccccchhhhhcCCcccc
Q 000065 2294 QYLSSIAATHYDTQAIDPELPLLLSAALVSLLR---VHPALADHVGYLGYVPKLVAAVAYEGRRETMSTEEVKNGNSEAD 2370 (2462)
Q Consensus 2294 ~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~---~qp~LaD~vp~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~ 2370 (2462)
.++..+...+.. -+.++.+-.+.++..|-. ..+.-...+...|.+|.|+.+|.+.+
T Consensus 218 ~Lv~lL~~~~~~---~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~------------------ 276 (354)
T 3nmw_A 218 FLVGTLTYRSQT---NTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHS------------------ 276 (354)
T ss_dssp HHHHHTTCCCSS---SCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSC------------------
T ss_pred HHHHHhccCCCc---ccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCC------------------
Confidence 555555432211 011233434445555544 47777788888999999999987521
Q ss_pred ccccCCCCCCCCCCChhhHhhhhHHHHHHHhh-CChhHHHHhhhccCCCCcchHHHHHHhccCCcch--hHHHHHHHHHh
Q 000065 2371 RTYESDDGSAQPVQTPQERVRLSCLRVLHQLA-ASTTCAEAMAATSTGTPQVVPILMKAIGWQGGSI--LALETLKRVVV 2447 (2462)
Q Consensus 2371 ~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls-~s~~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~--~a~etl~r~~~ 2447 (2462)
..+++.|...|..|+ .+..+.+.|.+..+ ||+|.+-++.....+ .|+.+|..+..
T Consensus 277 -----------------~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~-----i~~Lv~LL~s~~~~i~~~A~~aL~nL~~ 334 (354)
T 3nmw_A 277 -----------------LTIVSNACGTLWNLSARNPKDQEALWDMGA-----VSMLKNLIHSKHKMIAMGSAAALRNLMA 334 (354)
T ss_dssp -----------------HHHHHHHHHHHHHHTSSCHHHHHHHHHTTH-----HHHHHTTTTCSSHHHHHHHHHHHHHHHT
T ss_pred -----------------hHHHHHHHHHHHHHhCCCHHHHHHHHHCCC-----HHHHHHHHhCCCHHHHHHHHHHHHHHHc
Confidence 257789999999999 57889999998888 999999987754443 89999999987
Q ss_pred c
Q 000065 2448 A 2448 (2462)
Q Consensus 2448 ~ 2448 (2462)
.
T Consensus 335 ~ 335 (354)
T 3nmw_A 335 N 335 (354)
T ss_dssp T
T ss_pred C
Confidence 5
No 68
>1wh2_A Hypothetical protein AT5G08430; GYF domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} SCOP: d.76.1.1
Probab=96.80 E-value=0.0011 Score=65.11 Aligned_cols=55 Identities=15% Similarity=0.345 Sum_probs=49.5
Q ss_pred CCcceeEeecCCCcccccccHHHHHHHHhcCCcCcCCceecccCcchhhhhhhHHH
Q 000065 1169 EPFKEWMFIDKDGAQVGPVEKDAIRRFWSKKAIDWTTRCWASGMLDWKKLRDIREL 1224 (2462)
Q Consensus 1169 ~~~KEWyy~~~~g~~~GPvs~~eLk~l~~~g~I~~~T~~Wa~Gm~~W~~l~~ipqL 1224 (2462)
..+..|||.+..|+.+|||+..+|++-++.|-.+++-+||..|-..|+++. +.++
T Consensus 15 ~~~~~W~Y~Dp~g~iQGPFs~~~M~~W~~~GyF~~~L~Vrr~~~~~~~~i~-L~dl 69 (78)
T 1wh2_A 15 KEKLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVWMTGESMESAVL-LTDV 69 (78)
T ss_dssp SSSCCEEEECTTSCEEEEECHHHHHHHHTTTSSCSCCEEEETTSCTTSCEE-HHHH
T ss_pred cccCeEEEECCCCCCcCCcCHHHHHHHHHcCCCCCCceEEEeCCCCcceeh-HHHH
Confidence 346899999999999999999999999999999999999999988888876 5554
No 69
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=96.38 E-value=0.022 Score=68.92 Aligned_cols=136 Identities=15% Similarity=0.141 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhc-ccCCCCCCCCChhhHHHHHHHHhcC-ChhHHHHHHhhcchHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFE-CFSVPFAPDSNIPQLCLNVLSLLTT-CASCLEAMVADGSSLLLLLQ 2103 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~-~L~~~~~~~~~vq~~aL~VL~~ls~-n~~CVeaiA~~~~vl~~Ll~ 2103 (2462)
-..++..|.+++.+- +.+..+...|.+++|+. +|... ++.++..|..+|..++. |..|-+.+...+ .++.|+.
T Consensus 57 k~~Al~~L~~lv~~~-dna~~~~~~G~l~~Lv~~lL~s~---~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g-~l~~Ll~ 131 (296)
T 1xqr_A 57 REGALELLADLCENM-DNAADFCQLSGMHLLVGRYLEAG---AAGLRWRAAQLIGTCSQNVAAIQEQVLGLG-ALRKLLR 131 (296)
T ss_dssp HHHHHHHHHHHHTSH-HHHHHHHHTTHHHHHHHTTTTCS---SHHHHHHHHHHHHHHHTTCHHHHHHHHHTT-HHHHHHH
T ss_pred HHHHHHHHHHHHhCh-hhHHHHHHcCCHHHHHHHHHcCC---CHHHHHHHHHHHHHHHhCCHHHHHHHHHCC-CHHHHHH
Confidence 456788888888743 45555666788999999 88753 56899999999987765 456777777655 8899999
Q ss_pred HHhhC--cchHHHHHHHHHHhhc-chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcC
Q 000065 2104 MLHYA--PACREGVLHVLYALAS-TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQ 2170 (2462)
Q Consensus 2104 lL~~~--p~~~~~~L~~L~aL~s-~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD 2170 (2462)
+|... +..+..++-+|..++. ++...+..+..||+..|+.+|... .+.+|..+|.+|+.++..
T Consensus 132 LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~----d~~v~~~A~~aLs~L~~~ 197 (296)
T 1xqr_A 132 LLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQ----VQKLKVKSAFLLQNLLVG 197 (296)
T ss_dssp HHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSS----CHHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCC----CHHHHHHHHHHHHHHHhC
Confidence 99864 3456678888888875 556666778899999999998753 578999999999998764
No 70
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=95.38 E-value=0.05 Score=65.78 Aligned_cols=148 Identities=12% Similarity=0.036 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcC-ChhHHHHHHhhcchHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTT-CASCLEAMVADGSSLLLLLQM 2104 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~-n~~CVeaiA~~~~vl~~Ll~l 2104 (2462)
.+.+..+|.|+.+++|.....+...+.+++|..+|... ++..++..|+-.|+.++. +....+++...+ .++.|+.+
T Consensus 99 r~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~--~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~g-gi~~L~~l 175 (296)
T 1xqr_A 99 RWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRD--ACDTVRVKALFAISCLVREQEAGLLQFLRLD-GFSVLMRA 175 (296)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC--SCHHHHHHHHHHHHHHHTTCHHHHHHHHHTT-HHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccC--CCHHHHHHHHHHHHHHHcCCcHHHHHHHHCC-CHHHHHHH
Confidence 46789999999999999988888889999999999742 245788999999988875 567777777644 78888888
Q ss_pred HhhC-cchHHHHHHHHHHhhc-chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHH
Q 000065 2105 LHYA-PACREGVLHVLYALAS-TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLA 2182 (2462)
Q Consensus 2105 L~~~-p~~~~~~L~~L~aL~s-~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~ 2182 (2462)
|+.. +.....+.-+|..++. +++..+..++.|++..|+++|... .+.+|..++..|+.+..+ ++.......
T Consensus 176 L~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~~~----d~~v~~~al~aL~~l~~~---~~~~~~~~~ 248 (296)
T 1xqr_A 176 MQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTE----HSPFHEHVLGALCSLVTD---FPQGVRECR 248 (296)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSC----CSTHHHHHHHHHHHHHTT---CHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHcCC----ChhHHHHHHHHHHHHHhC---ChhHHHHHh
Confidence 8753 3445557777777765 466778888999999999999753 467999999999999886 676655544
Q ss_pred h
Q 000065 2183 R 2183 (2462)
Q Consensus 2183 K 2183 (2462)
+
T Consensus 249 ~ 249 (296)
T 1xqr_A 249 E 249 (296)
T ss_dssp C
T ss_pred c
Confidence 4
No 71
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=93.28 E-value=0.36 Score=56.53 Aligned_cols=149 Identities=13% Similarity=0.101 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcC-ChhHHHHHHhhcchHHHHHHHH
Q 000065 2027 QFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTT-CASCLEAMVADGSSLLLLLQML 2105 (2462)
Q Consensus 2027 ~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~-n~~CVeaiA~~~~vl~~Ll~lL 2105 (2462)
..+..+|.++-..++.....+...|.+++|..+|... +..+|..|...|..++. +.++-.+|+..+ .++.|+.+|
T Consensus 28 ~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~---~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~G-aI~~Lv~lL 103 (233)
T 3tt9_A 28 SAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQ---NEDVQRAVCGALRNLVFEDNDNKLEVAELN-GVPRLLQVL 103 (233)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCC---CHHHHHHHHHHHHHHHTTCHHHHHHHHHTT-HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCC---CHHHHHHHHHHHHHHHhCCHHHHHHHHHcC-CHHHHHHHH
Confidence 4567789998888888777777888999999999763 56899999999999986 788888888866 789999999
Q ss_pred hhC--cchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhc----CC--------CCCCcHHHHHHHHHHHHHHhcCC
Q 000065 2106 HYA--PACREGVLHVLYALASTPELAWAAAKHGGVVYILELLL----PS--------QQETPLQQRAAAASLLGKLVGQP 2171 (2462)
Q Consensus 2106 ~~~--p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~----~~--------~e~~~~~~R~~aA~lL~km~aD~ 2171 (2462)
++. ++....+.-+|+.|++.++. +..+..+|+.-|.+++. .. .......++.-++..|.-|..
T Consensus 104 ~~~~~~~~~e~a~~aL~nLS~~~~~-k~~i~~~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L~nLss-- 180 (233)
T 3tt9_A 104 KQTRDLETKKQITGLLWNLSSNDKL-KNLMITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSS-- 180 (233)
T ss_dssp HHCCCHHHHHHHHHHHHHHHTSGGG-HHHHHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTT--
T ss_pred ccCCCHHHHHHHHHHHHHHHcChhh-HHHHHhccHHHHHHHHhccccCCcccccccccccchHHHHHHHHHHHHHHhc--
Confidence 753 45566677888999876654 33444567888877652 10 112367889999999999976
Q ss_pred CCChHHHHHHHh
Q 000065 2172 MHGPRVAITLAR 2183 (2462)
Q Consensus 2172 lhGPrV~~~L~K 2183 (2462)
.++..|..+..
T Consensus 181 -~~~~~R~~~r~ 191 (233)
T 3tt9_A 181 -AGADGRKAMRR 191 (233)
T ss_dssp -SCHHHHHHHHT
T ss_pred -CCHHHHHHHHH
Confidence 35666665543
No 72
>3k3v_A Protein SMY2; GYF domain, poly-proline binding, domain SWAP, ragnya, phosphoprotein, protein binding; 1.80A {Saccharomyces cerevisiae} PDB: 3fma_A
Probab=92.18 E-value=0.1 Score=53.49 Aligned_cols=51 Identities=18% Similarity=0.337 Sum_probs=45.7
Q ss_pred cceeEeecCCCcccccccHHHHHHHHhcCCcCcCCceeccc-------Cc-chhhhhhh
Q 000065 1171 FKEWMFIDKDGAQVGPVEKDAIRRFWSKKAIDWTTRCWASG-------ML-DWKKLRDI 1221 (2462)
Q Consensus 1171 ~KEWyy~~~~g~~~GPvs~~eLk~l~~~g~I~~~T~~Wa~G-------m~-~W~~l~~i 1221 (2462)
++.|||.+..|+.+|||+..+|.+-++.|-.+++=+||..+ .+ .|.+|.++
T Consensus 15 e~~W~Y~Dp~G~vQGPFs~~~M~~W~~~GYF~~~L~VrR~~~~~~p~g~d~~F~~Lgel 73 (100)
T 3k3v_A 15 ESSWRYIDTQGQIHGPFTTQMMSQWYIGGYFASTLQISRLGSTPETLGINDIFITLGEL 73 (100)
T ss_dssp CCEEEEECTTSCEEEEEEHHHHHHHHHTTCCCTTCEEEECCSSCCSSSCBTCCEEHHHH
T ss_pred cceEEEECCCCCCcCCcCHHHHHHHHHcCCCCCCceEEEcCCCCCccCCCCceeeHHHH
Confidence 78999999999999999999999999999999999999864 33 48888776
No 73
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=87.05 E-value=32 Score=46.76 Aligned_cols=297 Identities=13% Similarity=0.115 Sum_probs=157.5
Q ss_pred HHHHHHHHHHHhhCccchhcccccCChhhhhc-ccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHH
Q 000065 2027 QFGLTSLQNILTSNPNLASIFSTKEKLLPLFE-CFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQML 2105 (2462)
Q Consensus 2027 ~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~-~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL 2105 (2462)
..+..+|..++.--|++...+=-.....+++. .+.. .....+...+|+.|+..+-++.|=+.|. ..++..|...+
T Consensus 230 ~~~~~~l~~lfPi~p~~~s~lfl~e~~~~~l~~~~~~--~~~~~~~~a~L~lLsaACi~~~cR~~I~--~~~~~~L~~~l 305 (778)
T 3opb_A 230 SIIVKTLSELYPSLTTLCSEIFLTKGLSKLFKKRVFE--EQDLQFTKELLRLLSSACIDETMRTYIT--ENYLQLLERSL 305 (778)
T ss_dssp HHHHHHHHHHTTTTHHHHHHHHSTTTHHHHHHHHHHS--SCCHHHHHHHHHHHHHHCCSHHHHHHHH--HHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHccccHHHHHHHHHhc--ccchHHHHHHHHHHHHHhCCcHHHHHHH--HhHHHHHHHHh
Confidence 34566677777777776555333333323332 2221 1234577999999999999999977774 34667777777
Q ss_pred hhCcchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHHhhC
Q 000065 2106 HYAPACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLARFL 2185 (2462)
Q Consensus 2106 ~~~p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~KfL 2185 (2462)
.. ...+..++=+|..|.+.++.-..-+.. +.-.+.+.|++. ....|..|++-|+-++-| |.|++.|..=
T Consensus 306 ~~-~~ir~lAavvL~KL~~~~~~~~~si~~-La~~~~~~L~~~----~~~~~~~AvEgLaYLSl~----~~VKe~L~~d- 374 (778)
T 3opb_A 306 NV-EDVQIYSALVLVKTWSFTKLTCINLKQ-LSEIFINAISRR----IVPKVEMSVEALAYLSLK----ASVKIMIRSN- 374 (778)
T ss_dssp TS-GGGHHHHHHHHHHHTGGGTCTTCCHHH-HHHHHHHHTTTC----CHHHHHHHHHHHHHHTTS----SHHHHHHHHC-
T ss_pred cc-HHHHHHHHHHHHHHhcCCCCCcCcHHH-HHHHHHHHHhcC----CccHHHHHHHHHHHHhCC----HHHHHHHHhC-
Confidence 54 455666777777777544321000000 122344455553 223488899999888765 6677766551
Q ss_pred cHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCccccccccCCCCcEE
Q 000065 2186 PDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRDEPQV 2265 (2462)
Q Consensus 2186 P~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~~~~~~~Q~~~~~~~W~lPe~f~~y~~l~~El~V 2265 (2462)
..|+ ...+.++.+ ++ +...--.+-.++.++ ...+ |. +..|-.
T Consensus 375 -~~~L--------~~Lv~llk~----~~---d~s~~Ygal~IL~NL--------t~~~------~~-------~~~e~~- 416 (778)
T 3opb_A 375 -ESFT--------EILLTMIKS----QK---MTHCLYGLLVIMANL--------STLP------EE-------XXXXXX- 416 (778)
T ss_dssp -HHHH--------HHHHHHHTT----TC---CTTHHHHHHHHHHHT--------TCCC------CC-------CCCCCC-
T ss_pred -HHHH--------HHHHHHHhC----CC---CchHHHHHHHHHHHh--------cCCC------cc-------cchhhh-
Confidence 1111 112223322 10 111111222222222 1111 11 111100
Q ss_pred eeeeehhhccCCCCCCCChHHHHHHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCChHHHH
Q 000065 2266 GGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKLV 2345 (2462)
Q Consensus 2266 GGVYlRLFl~nP~w~LR~PK~FL~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~lpkl~ 2345 (2462)
+=.||+=|.+... | +.+..|.. +...+=+.-++. ..|...|-+|.|+
T Consensus 417 ~l~~Lk~~A~~~~-----p--------------------~~~~~d~~---~~~~~~v~~~~~-----~~l~eaGvIp~Lv 463 (778)
T 3opb_A 417 XXXXXXXXXXXXX-----P--------------------AADKVGAE---KAAKEDILLFNE-----KYILRTELISFLK 463 (778)
T ss_dssp -------------------------------------------CCTH---HHHHHHHHHHHH-----HHTTTTTHHHHHH
T ss_pred hhhhhhhhccccC-----c--------------------ccCccccc---ccchHHHHHHHH-----HHHHHCcCHHHHH
Confidence 2234444433210 1 11111211 122222222222 4566778999999
Q ss_pred HHHHhhccccccchhhhhcCCccccccccCCCCCCCCCCChhhHhhhhHHHHHHHhhCChhHHHHhhhccCCCCcchHHH
Q 000065 2346 AAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAASTTCAEAMAATSTGTPQVVPIL 2425 (2462)
Q Consensus 2346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~s~~Cv~ala~~~~~~~~~v~~l 2425 (2462)
.++.+.+ +.++..++++|+.||.+..|-..|.+-.. +++|
T Consensus 464 ~Ll~S~s-----------------------------------~~~re~A~~aL~nLS~d~~~R~~lvqqGa-----l~~L 503 (778)
T 3opb_A 464 REMHNLS-----------------------------------PNCKQQVVRIIYNITRSKNFIPQLAQQGA-----VKII 503 (778)
T ss_dssp HHGGGSC-----------------------------------HHHHHHHHHHHHHHHTSGGGHHHHHHTTH-----HHHH
T ss_pred HHHcCCC-----------------------------------HHHHHHHHHHHHHHcCCHHHHHHHHHCCC-----HHHH
Confidence 8877532 25677999999999999999999998877 8888
Q ss_pred HHHhccCCc-----chhHHHHHHHHHhcC
Q 000065 2426 MKAIGWQGG-----SILALETLKRVVVAG 2449 (2462)
Q Consensus 2426 ~~a~~~~~~-----~~~a~etl~r~~~~~ 2449 (2462)
+.-.....+ ...|+-||.|+....
T Consensus 504 L~lL~s~~~~~~~~k~~AA~ALArLlis~ 532 (778)
T 3opb_A 504 LEYLANKQDIGEPIRILGCRALTRMLIFT 532 (778)
T ss_dssp HHHTTCC---CCHHHHHHHHHHHHHHHTS
T ss_pred HHHHhcCCCcchHHHHHHHHHHHHHHhcC
Confidence 888776532 248999999998654
No 74
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=86.36 E-value=4.2 Score=55.29 Aligned_cols=160 Identities=15% Similarity=0.175 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHhhCccchhc--cc--ccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHh-hcchHHHH
Q 000065 2027 QFGLTSLQNILTSNPNLASI--FS--TKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVA-DGSSLLLL 2101 (2462)
Q Consensus 2027 ~maL~AL~nLL~~nP~la~~--~~--s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~-~~~vl~~L 2101 (2462)
..++.+|..+.+..|..... .. -..-++.++.+|.. ++..++..|+..+..+..... +.+.. ...++..+
T Consensus 146 ~~al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~~~l~~---~~~~vR~~A~~aL~~~~~~~~--~~~~~~~~~~l~~l 220 (852)
T 4fdd_A 146 EGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKH---SSPKIRSHAVACVNQFIISRT--QALMLHIDSFIENL 220 (852)
T ss_dssp HHHHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHTTTTTC---SSHHHHHHHHHHHHTTTTTTC--HHHHTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHhchhhhcchHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHhccc--HHHHHHHHHHHHHH
Confidence 45677888888776654221 00 01234556666653 356788999998876654322 11211 12355666
Q ss_pred HHHHhh-CcchHHHHHHHHHHhhc-chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHH
Q 000065 2102 LQMLHY-APACREGVLHVLYALAS-TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAI 2179 (2462)
Q Consensus 2102 l~lL~~-~p~~~~~~L~~L~aL~s-~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~ 2179 (2462)
+.++.. .++.+..++++|..++. .++.+..-+. +.+.+++.++.+ ..+.+|..|++.+..+...+.....+.-
T Consensus 221 ~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~-~l~~~l~~~~~~----~~~~vr~~a~e~l~~l~~~~~~~~~~~~ 295 (852)
T 4fdd_A 221 FALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMH-NIVEYMLQRTQD----QDENVALEACEFWLTLAEQPICKDVLVR 295 (852)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHH-HHHHHHHHHHTC----SSHHHHHHHHHHHHHHTTSTTHHHHHTT
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH-HHHHHHHHHccC----CcHHHHHHHHHHHHHHhcchhHHHHHHH
Confidence 665543 34566778888888775 3333332222 345566776654 2578999999999998876532111222
Q ss_pred HHHhhCcHHHHHHHhcCc
Q 000065 2180 TLARFLPDGLVSVIRDGP 2197 (2462)
Q Consensus 2180 ~L~KfLP~~fvdamrdsp 2197 (2462)
.+.+++| .++..|..+.
T Consensus 296 ~~~~l~p-~ll~~l~~~e 312 (852)
T 4fdd_A 296 HLPKLIP-VLVNGMKYSD 312 (852)
T ss_dssp THHHHHH-HHHHHTSCCH
T ss_pred HHHHHHH-HHHHHcCCcH
Confidence 3444443 3456665543
No 75
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=86.14 E-value=2.4 Score=49.61 Aligned_cols=112 Identities=16% Similarity=0.140 Sum_probs=81.8
Q ss_pred ChhhhhcccCCCCCCCC--ChhhHHHHHHHHhc-CChhHHHHHHhhcchHHHHHHHHhh-CcchHHHHHHHHHHhhc-ch
Q 000065 2052 KLLPLFECFSVPFAPDS--NIPQLCLNVLSLLT-TCASCLEAMVADGSSLLLLLQMLHY-APACREGVLHVLYALAS-TP 2126 (2462)
Q Consensus 2052 ~L~~Lf~~L~~~~~~~~--~vq~~aL~VL~~ls-~n~~CVeaiA~~~~vl~~Ll~lL~~-~p~~~~~~L~~L~aL~s-~t 2126 (2462)
.++.+.++|... ++ .++..+...|..++ .+..--..|...+ .++.|+.+|.+ .++....+..+|..|+. ++
T Consensus 9 ~i~~lV~lL~s~---~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G-~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~ 84 (233)
T 3tt9_A 9 TLERAVSMLEAD---HMLPSRISAAATFIQHECFQKSEARKRVNQLR-GILKLLQLLKVQNEDVQRAVCGALRNLVFEDN 84 (233)
T ss_dssp CHHHHHHTCCSS---CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTT-HHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCH
T ss_pred cHHHHHHHhCCC---CchHHHHHHHHHHHHHHHcCCcHHHHHHHHcC-CHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCH
Confidence 356677777653 33 67777778887777 4555555666655 67999999975 34556678888889987 45
Q ss_pred HHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcC
Q 000065 2127 ELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQ 2170 (2462)
Q Consensus 2127 ~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD 2170 (2462)
+--....+.||+..|+++|..+ ....++..++.+|-.|...
T Consensus 85 ~nk~~I~~~GaI~~Lv~lL~~~---~~~~~~e~a~~aL~nLS~~ 125 (233)
T 3tt9_A 85 DNKLEVAELNGVPRLLQVLKQT---RDLETKKQITGLLWNLSSN 125 (233)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCHHHHHHHHccC---CCHHHHHHHHHHHHHHHcC
Confidence 6666678899999999999742 2467899999999888754
No 76
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=85.87 E-value=8.2 Score=51.19 Aligned_cols=198 Identities=15% Similarity=0.163 Sum_probs=147.1
Q ss_pred HHHHHHHHHHhcHHh--hHhhhcchhhhhhHHhhhccCCcchHHHHHHHHHHHhcCCCCCCccccCchhhhhhhhcccch
Q 000065 501 GFVACLRRLLTSRTA--ASHVMSFPAAVGRIMGLLRNGSEGVAAEAAGLIAILIGGGSGDTNMLTDSKGEQHATMMHTKS 578 (2462)
Q Consensus 501 ~~~~aLrRL~as~~g--f~~~~~~p~~~~~v~~~L~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~d~~~e~~~~~~~nKs 578 (2462)
..+|+|+.|+..|.. =.++...|..+.++|.+|.-.+|-|-.+|+.+|+.|..+ + .+-.
T Consensus 141 ~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~---n----------------~~iQ 201 (651)
T 3grl_A 141 PGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRS---N----------------GAIQ 201 (651)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTT---C----------------HHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcC---C----------------HHHH
Confidence 468899999999987 557777899999999999999999999999999999862 1 1222
Q ss_pred hcccchhhHHHHHHhhcCCCC--hhHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHHHhhhhHHHHhhCCCc------
Q 000065 579 VLFSQQGYLIVLVNRLRPMSV--SPLLSMAVVEVLETMICEPHSETTQYTVFVELLRQVAGLRRRLFALFGHPA------ 650 (2462)
Q Consensus 579 ~ll~~~~~~~~L~~~l~~~~~--~alv~~a~l~~l~~~lC~P~seTT~~~~f~~ll~~va~~gr~lf~Lf~hp~------ 650 (2462)
-+++-++-++.|++.++.-|. |+.|+.=+|.++.-.+.. .+.....|-+. +.-..|-.||..+-
T Consensus 202 klVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~---N~sNQ~~FrEt-----~~i~~L~~LL~~~~~~~~W~ 273 (651)
T 3grl_A 202 KIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKN---NNSNQNFFKEG-----SYIQRMKPWFEVGDENSGWS 273 (651)
T ss_dssp HHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTT---CHHHHHHHHHT-----TCGGGGGGGGCCCSCSSCCC
T ss_pred HHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhc---CHHHHHHHHHc-----CCHHHHHHHhCCCccccccH
Confidence 456667778999999997544 999999999999999843 33345555542 22234445555332
Q ss_pred ---hhHHhHHHHHHHHHHhhcH-HHHHHHHHHHHhhcHHHHHHHHHhcCCC--CchhHHHHHHHHHHhcCChhHHhhhhh
Q 000065 651 ---ESVRETVAVIMRTIAEEDA-IAAESMRDAALRDGALLRHLLHAFFLPA--GERREVSRQLVALWADSYQPALDLLSR 724 (2462)
Q Consensus 651 ---~~i~~~aglimrai~Ee~~-~~a~~mq~~AL~eGall~HL~~A~f~~~--~~~r~lsr~LV~lW~~~~~~a~~LL~R 724 (2462)
.+-+.++=.|+|.+...+. ....+.=+.|+.++.++.+|..=+|.+. .+-+--+-..+|-=+.+|+..++.+..
T Consensus 274 ~Qk~~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~~~~p~~i~~~Al~tla~~irgN~~~Q~~fa~ 353 (651)
T 3grl_A 274 AQKVTNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFAS 353 (651)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCCHHHHHHHHccCCCCHHHHHHHHHHHHHHHhCCHHHHHHHhh
Confidence 2444567778999888854 4456666778889999999999888764 344666677777788899988888876
Q ss_pred c
Q 000065 725 V 725 (2462)
Q Consensus 725 i 725 (2462)
+
T Consensus 354 ~ 354 (651)
T 3grl_A 354 V 354 (651)
T ss_dssp C
T ss_pred c
Confidence 5
No 77
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=85.83 E-value=11 Score=46.51 Aligned_cols=281 Identities=12% Similarity=0.082 Sum_probs=139.0
Q ss_pred CChhhHHHHHHHHhcCC--hhHHHHHHhhcchHHHHHHHHhhC---cchHHHHHHHHHHhhcchHHHHHHHHc-CCHhhh
Q 000065 2068 SNIPQLCLNVLSLLTTC--ASCLEAMVADGSSLLLLLQMLHYA---PACREGVLHVLYALASTPELAWAAAKH-GGVVYI 2141 (2462)
Q Consensus 2068 ~~vq~~aL~VL~~ls~n--~~CVeaiA~~~~vl~~Ll~lL~~~---p~~~~~~L~~L~aL~s~t~lvkqal~~-GgvlyL 2141 (2462)
..++..++.+|..+... ........ ..++..++.++... ++.+..+++++..+...-+ ..... ....|+
T Consensus 144 ~~~r~~al~~l~~l~~~~~~~~~~~~~--~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~---~~~~~~~~~~~l 218 (462)
T 1ibr_B 144 EHMKESTLEAIGYICQDIDPEQLQDKS--NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTK---ANFDKESERHFI 218 (462)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGTGGGH--HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTH---HHHTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCchhhHhHH--HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HhhhhhHHHHHH
Confidence 35677888888766531 11111111 23566677777654 4556667787776553211 00000 011234
Q ss_pred HHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHH-hhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHH
Q 000065 2142 LELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLA-RFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAM 2220 (2462)
Q Consensus 2142 L~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~-KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~m 2220 (2462)
+..++.........+|..+++.|..+... ++..+...+. .++| .++..++|. +++.
T Consensus 219 ~~~l~~~~~~~~~~vr~~~~~~l~~l~~~--~~~~~~~~~~~~l~~-~~~~~~~~~--------------------~~~v 275 (462)
T 1ibr_B 219 MQVVCEATQCPDTRVRVAALQNLVKIMSL--YYQYMETYMGPALFA-ITIEAMKSD--------------------IDEV 275 (462)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHHHH--CGGGCTTTTTTTHHH-HHHHHHHCS--------------------SHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH-HHHHHHcCC--------------------chHH
Confidence 44433222234678999999999998763 2222211111 2222 122222221 3455
Q ss_pred HHHHHHHHHHHHHHHHHHH-hcCCcccccCCccccccccCCCCcEEeeeeehhhccCCCCCCCCh----HHHHHHHHHHH
Q 000065 2221 AASLSAQISTMASDLYREQ-MKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNP----KRFLEGLLDQY 2295 (2462)
Q Consensus 2221 R~~v~~~i~~~~~~~~~~Q-~~~~~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~nP~w~LR~P----K~FL~~Ll~~~ 2295 (2462)
|....+++.+.+....... ..+. ..++ -.|..|.. +.++..++..+
T Consensus 276 ~~~a~~~l~~~~~~~~~~~~~~~~----~~~~-------------------------~~~~~~~~~~~~~~~~~~l~p~l 326 (462)
T 1ibr_B 276 ALQGIEFWSNVCDEEMDLAIEASE----AAEQ-------------------------GRPPEHTSKFYAKGALQYLVPIL 326 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC----TTCS-------------------------SSCSSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc----cccc-------------------------CCCccchhHHHHHHHhhhccHHH
Confidence 6666666666655432111 1110 0000 01111221 23556677777
Q ss_pred HHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCChHHHHHHHHhhccccccchhhhhcCCccccccccC
Q 000065 2296 LSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYES 2375 (2462)
Q Consensus 2296 ~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2375 (2462)
+..+...+.|...-+...-.-...++-.|...-+ -..+|.++..+...-
T Consensus 327 ~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~--------~~~~~~~~~~l~~~l----------------------- 375 (462)
T 1ibr_B 327 TQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE--------DDIVPHVLPFIKEHI----------------------- 375 (462)
T ss_dssp HHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTT--------TTHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHhcccccccccchHHHHHHHHHHHHHHhcc--------HHHHHHHHHHHHHHh-----------------------
Confidence 7777654322211122222222333333333322 134566666554211
Q ss_pred CCCCCCCCCChhhHhhhhHHHHHHHhhCChhHHHHhhhccCCCCcchHHHHHHhccCCcch--hHHHHHHHHHhc
Q 000065 2376 DDGSAQPVQTPQERVRLSCLRVLHQLAASTTCAEAMAATSTGTPQVVPILMKAIGWQGGSI--LALETLKRVVVA 2448 (2462)
Q Consensus 2376 ~~~~~~~~~~~~~~~~~s~l~vLh~Ls~s~~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~--~a~etl~r~~~~ 2448 (2462)
..+..++|..|+..|..++.+.. .+.+. -.-|.++|.+.++++.....+ -||.||.++...
T Consensus 376 --------~~~~~~~r~aal~~l~~l~~~~~-~~~~~---~~l~~~~~~l~~~l~d~~~~Vr~~a~~~l~~~~~~ 438 (462)
T 1ibr_B 376 --------KNPDWRYRDAAVMAFGCILEGPE-PSQLK---PLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICEL 438 (462)
T ss_dssp --------TCSSHHHHHHHHHHHHHTSSSSC-TTTTC---TTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred --------cCCChHHHHHHHHHHHHHhcCCc-HHHHH---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
Confidence 01124789999999999997421 01121 233778999999998754444 899999998875
No 78
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=83.81 E-value=45 Score=44.59 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=61.5
Q ss_pred cchHHHHHHHHh-hCcchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHH-hhcCCCCCCcHHHHHHHHHHHHHHhcCCC
Q 000065 2095 GSSLLLLLQMLH-YAPACREGVLHVLYALASTPELAWAAAKHGGVVYILE-LLLPSQQETPLQQRAAAASLLGKLVGQPM 2172 (2462)
Q Consensus 2095 ~~vl~~Ll~lL~-~~p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~-LL~~~~e~~~~~~R~~aA~lL~km~aD~l 2172 (2462)
+.+++ ++..|. ..++.+..++..|..|+.++...+..+..|+|.-+|. +|.+ .+.++|++|+.+|+-+..+
T Consensus 34 ~~i~P-ll~~L~S~~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D----~~~~Vr~~A~gaLrnL~~~-- 106 (684)
T 4gmo_A 34 DKILP-VLKDLKSPDAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTD----NNIDSRAAGWEILKVLAQE-- 106 (684)
T ss_dssp HTTHH-HHHHHSSSCCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTC----SCHHHHHHHHHHHHHHHHH--
T ss_pred hhHHH-HHHHcCCCCHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCC----CCHHHHHHHHHHHHHHHhh--
Confidence 33555 445555 3567788899999999999999999999999998887 4554 3688999999999999876
Q ss_pred CChHHHHHH
Q 000065 2173 HGPRVAITL 2181 (2462)
Q Consensus 2173 hGPrV~~~L 2181 (2462)
-|+.+...+
T Consensus 107 ~g~d~~~~l 115 (684)
T 4gmo_A 107 EEADFCVHL 115 (684)
T ss_dssp SCHHHHHHH
T ss_pred cCchHHHHH
Confidence 466655444
No 79
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=82.75 E-value=2.2 Score=57.67 Aligned_cols=140 Identities=16% Similarity=0.152 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhc-CChhHHHHHHh--hcchHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLT-TCASCLEAMVA--DGSSLLLLL 2102 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls-~n~~CVeaiA~--~~~vl~~Ll 2102 (2462)
.+.+.++|.|+ ..++....++...|.+..|..+|..........+..|...|..++ ...+-+ .+.. ...++..|+
T Consensus 474 re~A~~aL~nL-S~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~-~f~~~~~~~aI~pLv 551 (778)
T 3opb_A 474 KQQVVRIIYNI-TRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGL-IFKKYSALNAIPFLF 551 (778)
T ss_dssp HHHHHHHHHHH-HTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHH-HSSSSCSTTHHHHHH
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHH-HcCCCccccchHHHH
Confidence 35677888887 566888899999999999999997642111236788999997665 222222 2221 125788999
Q ss_pred HHHhhCcch---------------HHHHHHHHHHhhcch-----HHHHHHHHc-CCHhhhHHhhcCCCCCCcHHHHHHHH
Q 000065 2103 QMLHYAPAC---------------REGVLHVLYALASTP-----ELAWAAAKH-GGVVYILELLLPSQQETPLQQRAAAA 2161 (2462)
Q Consensus 2103 ~lL~~~p~~---------------~~~~L~~L~aL~s~t-----~lvkqal~~-GgvlyLL~LL~~~~e~~~~~~R~~aA 2161 (2462)
.+|+..|+. .-.+|-.|..|++.+ ++-+..+.. |++..|.+++... +..+|..|+
T Consensus 552 ~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~----n~~VrrAA~ 627 (778)
T 3opb_A 552 ELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDE----NVPLQRSTL 627 (778)
T ss_dssp HTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCS----SHHHHHHHH
T ss_pred HHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCC----CHHHHHHHH
Confidence 998733332 224677777788765 344556774 8899999987642 578999999
Q ss_pred HHHHHHhcCC
Q 000065 2162 SLLGKLVGQP 2171 (2462)
Q Consensus 2162 ~lL~km~aD~ 2171 (2462)
+++..|+.++
T Consensus 628 elI~NL~~~~ 637 (778)
T 3opb_A 628 ELISNMMSHP 637 (778)
T ss_dssp HHHHHHHTSG
T ss_pred HHHHHHhCCc
Confidence 9999999854
No 80
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=75.84 E-value=63 Score=42.62 Aligned_cols=140 Identities=14% Similarity=0.159 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHHh
Q 000065 2027 QFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQMLH 2106 (2462)
Q Consensus 2027 ~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL~ 2106 (2462)
.++.-++.+++..+|++...+.+. |..-|.. +++.++..||..|..+.. .+ ++ ..++..+..+|.
T Consensus 88 rl~Yl~~~~~~~~~~e~~~l~in~-----l~kDL~~---~n~~vr~lAL~~L~~i~~-~~----~~--~~l~~~l~~~L~ 152 (618)
T 1w63_A 88 RIGYLGAMLLLDERQDVHLLMTNC-----IKNDLNH---STQFVQGLALCTLGCMGS-SE----MC--RDLAGEVEKLLK 152 (618)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHHHH-----HHHHHSC---SSSHHHHHHHHHHHHHCC-HH----HH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHH-----HHHhcCC---CCHhHHHHHHHHHHhcCC-HH----HH--HHHHHHHHHHHc
Confidence 345668889999888876644322 2333433 367899999999998873 32 33 224556667775
Q ss_pred h-CcchHHHHHHHHHHhhc-chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHHhh
Q 000065 2107 Y-APACREGVLHVLYALAS-TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLARF 2184 (2462)
Q Consensus 2107 ~-~p~~~~~~L~~L~aL~s-~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~Kf 2184 (2462)
+ +|..+..+.-++..+.. +++++. +.+..+.+++++ .++.++..|+.+|..+.. +.|.....+.++
T Consensus 153 ~~~~~VRk~A~~al~~l~~~~p~~v~-----~~~~~l~~lL~D----~d~~V~~~Al~~L~~i~~---~~~~~~~~~~~~ 220 (618)
T 1w63_A 153 TSNSYLRKKAALCAVHVIRKVPELME-----MFLPATKNLLNE----KNHGVLHTSVVLLTEMCE---RSPDMLAHFRKL 220 (618)
T ss_dssp SCCHHHHHHHHHHHHHHHHHCGGGGG-----GGGGGTTTSTTC----CCHHHHHHHHHHHHHHCC---SHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHChHHHH-----HHHHHHHHHhCC----CCHhHHHHHHHHHHHHHH---hChHHHHHHHHH
Confidence 4 45556667666666664 444442 445556666654 368999999999999865 345543344454
Q ss_pred CcHHHHHHHh
Q 000065 2185 LPDGLVSVIR 2194 (2462)
Q Consensus 2185 LP~~fvdamr 2194 (2462)
.|. ++..++
T Consensus 221 v~~-l~~~L~ 229 (618)
T 1w63_A 221 VPQ-LVRILK 229 (618)
T ss_dssp HHH-HHHHHH
T ss_pred HHH-HHHHHH
Confidence 443 334443
No 81
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=74.98 E-value=14 Score=42.28 Aligned_cols=169 Identities=16% Similarity=0.209 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCC--CCCCChhhHHHHHHHHhcCChhHHHHHHh-hcchHHHHHH
Q 000065 2027 QFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPF--APDSNIPQLCLNVLSLLTTCASCLEAMVA-DGSSLLLLLQ 2103 (2462)
Q Consensus 2027 ~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~--~~~~~vq~~aL~VL~~ls~n~~CVeaiA~-~~~vl~~Ll~ 2103 (2462)
.+++.+|..++..+|.+.. ..+..++..|.... ..+..+...++.++..++..- -..+.. ...+++.++.
T Consensus 33 ~~a~~~L~~l~~~~~~~~~-----~~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l--~~~~~~~~~~ilp~ll~ 105 (242)
T 2qk2_A 33 KESLEVLEKLLTDHPKLEN-----GEYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGL--AKRFSNYASACVPSLLE 105 (242)
T ss_dssp HHHHHHHHHHHHHCSSBCC-----CCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHH--GGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCC-----CCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHH
Confidence 5678899999998776432 11233444332111 235568889999888777211 011111 1235666777
Q ss_pred HHhhC-cchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChH--HHHH
Q 000065 2104 MLHYA-PACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPR--VAIT 2180 (2462)
Q Consensus 2104 lL~~~-p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPr--V~~~ 2180 (2462)
.+... +..+..+..+|.+++....+ .+ .+..++..|.+ .++++|..++..|+.+... +||. ....
T Consensus 106 ~l~d~~~~vr~~a~~aL~~~~~~~~~-~~-----ll~~l~~~l~~----~~~~vr~~~l~~l~~~l~~--~~~~~~~~~~ 173 (242)
T 2qk2_A 106 KFKEKKPNVVTALREAIDAIYASTSL-EA-----QQESIVESLSN----KNPSVKSETALFIARALTR--TQPTALNKKL 173 (242)
T ss_dssp GGGCCCHHHHHHHHHHHHHHHTTSCH-HH-----HHHHHHHHTTC----SCHHHHHHHHHHHHHHHTT--CCGGGCCHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHHHcCCH-HH-----HHHHHHHHHcC----CChHHHHHHHHHHHHHHHH--cCCCCccHHH
Confidence 66542 34556666777666653221 11 12223444432 3689999999999998765 5665 2344
Q ss_pred HHhhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHH
Q 000065 2181 LARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDL 2235 (2462)
Q Consensus 2181 L~KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~~~~ 2235 (2462)
+..++|. ++..+.|. +.+.|.....++..++..+
T Consensus 174 l~~l~p~-l~~~l~D~--------------------~~~VR~~A~~~l~~l~~~v 207 (242)
T 2qk2_A 174 LKLLTTS-LVKTLNEP--------------------DPTVRDSSAEALGTLIKLM 207 (242)
T ss_dssp HHHHHHH-HHHHHTSS--------------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHhcCC--------------------ChHHHHHHHHHHHHHHHHc
Confidence 5555543 44445433 2244666666666665444
No 82
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=70.42 E-value=6.9 Score=44.16 Aligned_cols=81 Identities=14% Similarity=0.265 Sum_probs=58.3
Q ss_pred EEEEEeecccc---cccEEEEEecCeeeeeCCCCcccccccccccccccccccccCCCCCCcEEEEEeecCCCcccceee
Q 000065 24 RYLVVKHSWRG---RYKRILCISNATIITLDPNTLAVTNSYEVASDFEGATPIIGRDDNANEFNISVRTDGRGKFKAFKF 100 (2462)
Q Consensus 24 ~y~vtKhSWrg---kYkRIf~Ig~~~i~T~nP~tl~vTN~W~y~~d~~~i~p~~~~~~~~~eF~i~~rk~~~~K~~~mkF 100 (2462)
.|+..|..-+| .-..++.|+..||..|||.|-+++..|+| ++|..+... .+.|+|.+... +..++.|
T Consensus 117 ~~f~v~~~~~g~~~~~~~~Lgi~~~Gi~~~~~~~~~~l~~~~~-~~I~~~~~~------~~~f~i~~~~~---~~~~~~~ 186 (206)
T 1mix_A 117 SFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSL-TNIKRWAAS------PKSFTLDFGDY---QDGYYSV 186 (206)
T ss_dssp EEEEEEECCSSCSSCEEEEEEECSSEEEEEETTTCCEEEEEEG-GGCCEEEEC------SSEEEEECGGG---SSSCEEE
T ss_pred eEEEEEEccCCCCCcCcEEEEEcccceEEeCCCCCceeeeeeh-hHeeecccC------CCEEEEEeCcc---cceEEEE
Confidence 45555543333 35789999999999999999999999999 799887752 35799887653 1235788
Q ss_pred ehhhhhHHHHHHHHh
Q 000065 101 SSRFRASILTELHRI 115 (2462)
Q Consensus 101 ss~~Ra~lLT~l~r~ 115 (2462)
.|.. +..+++|...
T Consensus 187 ~t~~-~~~i~~Li~~ 200 (206)
T 1mix_A 187 QTTE-GEQIAQLIAG 200 (206)
T ss_dssp ECSC-HHHHHHHHHT
T ss_pred ECCc-HHHHHHHHHH
Confidence 7754 5666766653
No 83
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=66.23 E-value=28 Score=44.24 Aligned_cols=129 Identities=13% Similarity=0.012 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHHh
Q 000065 2027 QFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQMLH 2106 (2462)
Q Consensus 2027 ~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL~ 2106 (2462)
..+.++|..+...-+.-. .. ..-++.+..++.. ++..++..|++.|..+...-.- +.+ ...+++.+..++.
T Consensus 182 ~~a~~~l~~l~~~~~~~~-~~--~~l~~~l~~~~~d---~~~~vr~~a~~~l~~l~~~~~~-~~~--~~~~~~~l~~~~~ 252 (588)
T 1b3u_A 182 RAAASKLGEFAKVLELDN-VK--SEIIPMFSNLASD---EQDSVRLLAVEACVNIAQLLPQ-EDL--EALVMPTLRQAAE 252 (588)
T ss_dssp HHHHHHHHHHHHTSCHHH-HH--HTHHHHHHHHHTC---SCHHHHTTHHHHHHHHHHHSCH-HHH--HHHTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcHHh-HH--HHHHHHHHHHhcC---CcHHHHHHHHHHHHHHHHhCCH-HHH--HHHHHHHHHHHcc
Confidence 345677777665543311 00 1122334444432 2457888888888766532111 011 1235555655554
Q ss_pred h-CcchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcC
Q 000065 2107 Y-APACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQ 2170 (2462)
Q Consensus 2107 ~-~p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD 2170 (2462)
. .+..+..+.+.|..+.... -.+......+.+++.++.+ ..+.+|..++..|+++...
T Consensus 253 d~~~~vR~~a~~~l~~l~~~~--~~~~~~~~l~~~l~~~l~d----~~~~vr~~a~~~l~~~~~~ 311 (588)
T 1b3u_A 253 DKSWRVRYMVADKFTELQKAV--GPEITKTDLVPAFQNLMKD----CEAEVRAAASHKVKEFCEN 311 (588)
T ss_dssp CSSHHHHHHHHHTHHHHHHHH--CHHHHHHTHHHHHHHHHTC----SSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHh--CcccchhHHHHHHHHHhCC----CcHHHHHHHHHHHHHHHHH
Confidence 3 2344566667666665321 0111223345566666643 3578999999999998864
No 84
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=64.26 E-value=57 Score=43.46 Aligned_cols=158 Identities=18% Similarity=0.213 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCC-CCCC---h--hhHHHHHHHHhcCC-------hhHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFA-PDSN---I--PQLCLNVLSLLTTC-------ASCLEAMV 2092 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~-~~~~---v--q~~aL~VL~~ls~n-------~~CVeaiA 2092 (2462)
++=++..+.||++.||..-..+-..+.+++|..+|..... .... + ...+|+++..+... ..|-.++.
T Consensus 229 v~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L~~LL~~~~~~~~W~~Qk~~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~~~ 308 (651)
T 3grl_A 229 VEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPNNPPGATSSCQKAMF 308 (651)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGGCCCSCSSCCCHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHhCCCccccccHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 3556889999999999877777777778888888765321 0111 1 23478888777643 45777788
Q ss_pred hhcchHHHHHHHHhhC--cc-hHHHHHHHHHHhhcchHHHHHHHHc---------CCHhhhHHhhcCCCCCCcHHHHHHH
Q 000065 2093 ADGSSLLLLLQMLHYA--PA-CREGVLHVLYALASTPELAWAAAKH---------GGVVYILELLLPSQQETPLQQRAAA 2160 (2462)
Q Consensus 2093 ~~~~vl~~Ll~lL~~~--p~-~~~~~L~~L~aL~s~t~lvkqal~~---------GgvlyLL~LL~~~~e~~~~~~R~~a 2160 (2462)
+++ ++..|+.++... |. ....++.++-.+.......++.+.. -.++.+|-.+.++ ..+...|+.+
T Consensus 309 ~~g-~l~~Ll~ll~~~~~p~~i~~~Al~tla~~irgN~~~Q~~fa~~~vp~~~~~p~li~lL~~~~~~--~~~~~lR~Aa 385 (651)
T 3grl_A 309 QCG-LLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNAPSNPPRPAIVVLLMSMVNE--RQPFVLRCAV 385 (651)
T ss_dssp HTT-HHHHHHHHHTCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHCEESSSSCEEHHHHHHHHHTCT--TSCHHHHHHH
T ss_pred HCC-CHHHHHHHHccCCCCHHHHHHHHHHHHHHHhCCHHHHHHHhhccCCCCCCcChHHHHHHHHhcc--cccHHHHHHH
Confidence 766 677777777653 33 3455777777777666666666543 2233322222333 2468899999
Q ss_pred HHHHHHHhcCCCCChHHHHHHHhhCcHH
Q 000065 2161 ASLLGKLVGQPMHGPRVAITLARFLPDG 2188 (2462)
Q Consensus 2161 A~lL~km~aD~lhGPrV~~~L~KfLP~~ 2188 (2462)
+..|+....+-. .-=..+++.|+|..
T Consensus 386 ~~cl~ay~~~N~--~~Q~~i~~~llp~~ 411 (651)
T 3grl_A 386 LYCFQCFLYKNQ--KGQGEIVSTLLPST 411 (651)
T ss_dssp HHHHHHHHTTCH--HHHHHHHHTTSSCC
T ss_pred HHHHHHHHhCCH--HHHHHHHHhcCCcc
Confidence 999999987632 22236678888864
No 85
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=61.55 E-value=16 Score=42.05 Aligned_cols=80 Identities=14% Similarity=0.291 Sum_probs=55.4
Q ss_pred EEEEEeecccc---cccEEEEEecCeeeeeCCCCcccccccccccccccccccccCCCCCCcEEEEEeecCCCcccceee
Q 000065 24 RYLVVKHSWRG---RYKRILCISNATIITLDPNTLAVTNSYEVASDFEGATPIIGRDDNANEFNISVRTDGRGKFKAFKF 100 (2462)
Q Consensus 24 ~y~vtKhSWrg---kYkRIf~Ig~~~i~T~nP~tl~vTN~W~y~~d~~~i~p~~~~~~~~~eF~i~~rk~~~~K~~~mkF 100 (2462)
.|+..|..-+| --..++.|+..||..|||.|-+++..|+| ++|..+... .+.|+|.+.. . +...+.|
T Consensus 128 ~~f~v~~~~~g~~~~~~~~LgI~~~GI~v~~~~tk~~l~~~~~-~~I~~~~~~------~~~f~I~~~~--~-~~~~~~~ 197 (222)
T 4f7g_A 128 SFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSL-TNIKRWAAS------PKSFTLDFGD--Y-QDGYYSV 197 (222)
T ss_dssp EEEEEEEECTTSSCEEEEEEEECSSEEEEECTTTCCEEEEEEG-GGCCEEEEC------SSEEEEECCT--T-SSSCEEE
T ss_pred EEEEEEEecCCCCCCCCEEEEEcCCcEEEEcCCCCceeEeccH-HHeeeeccC------CCEEEEEECC--c-cceEEEE
Confidence 44444543223 23789999999999999999999999999 799887741 3679998752 2 2235777
Q ss_pred ehhhhhHHHHHHHH
Q 000065 101 SSRFRASILTELHR 114 (2462)
Q Consensus 101 ss~~Ra~lLT~l~r 114 (2462)
.|.. ++.+.+|..
T Consensus 198 ~T~q-~~~I~~Li~ 210 (222)
T 4f7g_A 198 QTTE-GEQIAQLIA 210 (222)
T ss_dssp ECSC-HHHHHHHHH
T ss_pred ECCc-HHHHHHHHH
Confidence 7754 444555544
No 86
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=60.09 E-value=11 Score=50.50 Aligned_cols=137 Identities=14% Similarity=0.148 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHhhCccchhcccccCChhhhhc-ccCCCCCCCCChhhHHHHHHHHhcC---ChhHHHHHHhhcchHHHHH
Q 000065 2027 QFGLTSLQNILTSNPNLASIFSTKEKLLPLFE-CFSVPFAPDSNIPQLCLNVLSLLTT---CASCLEAMVADGSSLLLLL 2102 (2462)
Q Consensus 2027 ~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~-~L~~~~~~~~~vq~~aL~VL~~ls~---n~~CVeaiA~~~~vl~~Ll 2102 (2462)
.+|+.||.|++. +|.....+...+.+..++. +|.- ++..|+..|...|..|+. ...|. .|...+ ++..|+
T Consensus 52 ~~A~~al~~l~~-~~~~~~l~~~~~~v~~ll~~lL~D---~~~~Vr~~A~gaLrnL~~~~g~d~~~-~l~~~~-il~~L~ 125 (684)
T 4gmo_A 52 TTAAGAIANIVQ-DAKCRKLLLREQVVHIVLTETLTD---NNIDSRAAGWEILKVLAQEEEADFCV-HLYRLD-VLTAIE 125 (684)
T ss_dssp HHHHHHHHHHTT-SHHHHHHHHHTTHHHHHHHTTTTC---SCHHHHHHHHHHHHHHHHHSCHHHHH-HHHHTT-HHHHHH
T ss_pred HHHHHHHHHHHc-CcHHHHHHHHcCCHHHHHHHHcCC---CCHHHHHHHHHHHHHHHhhcCchHHH-HHHHcC-hHHHHH
Confidence 578999999996 6676666666666666554 4432 356788888888877763 34444 566655 778887
Q ss_pred HHHhhCc----------------------chHHHHHHHHHHhhc-chHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHH
Q 000065 2103 QMLHYAP----------------------ACREGVLHVLYALAS-TPELAWAAAKHGGVVYILELLLPSQQETPLQQRAA 2159 (2462)
Q Consensus 2103 ~lL~~~p----------------------~~~~~~L~~L~aL~s-~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~ 2159 (2462)
.++.... +..+.++.+|..|+. +.+.+......|++..|+..|.+. +..+..++..
T Consensus 126 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~~~-~~~~~~v~~~ 204 (684)
T 4gmo_A 126 HAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLISA-DIAPQDIYEE 204 (684)
T ss_dssp HHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHHHH-CCSCHHHHHH
T ss_pred HHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHHhc-CCCcHHHHHH
Confidence 7775310 122336677777775 456676777888888999887543 3356788999
Q ss_pred HHHHHHHHhcC
Q 000065 2160 AASLLGKLVGQ 2170 (2462)
Q Consensus 2160 aA~lL~km~aD 2170 (2462)
++..|..+..|
T Consensus 205 a~~~L~~ls~d 215 (684)
T 4gmo_A 205 AISCLTTLSED 215 (684)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcc
Confidence 99988887765
No 87
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=57.61 E-value=14 Score=48.06 Aligned_cols=133 Identities=13% Similarity=0.171 Sum_probs=91.0
Q ss_pred chhhhhhHHhhhccCCcchHHHHHHHHHHHhcCCCCCCccccCchhhhhhhhcccchhcccchhhHHHHHHhhcCCCChh
Q 000065 522 FPAAVGRIMGLLRNGSEGVAAEAAGLIAILIGGGSGDTNMLTDSKGEQHATMMHTKSVLFSQQGYLIVLVNRLRPMSVSP 601 (2462)
Q Consensus 522 ~p~~~~~v~~~L~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~d~~~e~~~~~~~nKs~ll~~~~~~~~L~~~l~~~~~~a 601 (2462)
+|..+..|+..|...+|.|...|+++|.-.. . .++ ++ ..+..|-+.|.....=+
T Consensus 297 Ld~Vv~aVL~GL~D~DDDVRAVAAetLiPIA-----~--------p~~-----l~--------~LL~iLWd~L~~LDDLS 350 (800)
T 3oc3_A 297 KDGLCRKLVSLLSSPDEDIKLLSAELLCHFP-----I--------TDS-----LD--------LVLEKCWKNIESEELIS 350 (800)
T ss_dssp HHHHHHHHHHHTTCSSHHHHHHHHHHHTTSC-----C--------SST-----HH--------HHHHHHHHHHHTCCSCC
T ss_pred HHHHHHHHHhhcCCcccHHHHHHHHHhhhhc-----c--------hhh-----HH--------HHHHHHHHHhhhhcccc
Confidence 5666678899999999999999998876433 1 111 11 12344444444433333
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHHHhhhhHHHHhhCCCchhHHhHHHHHHHHHHhhcHHHHHHHHHHHHh
Q 000065 602 LLSMAVVEVLETMICEPHSETTQYTVFVELLRQVAGLRRRLFALFGHPAESVRETVAVIMRTIAEEDAIAAESMRDAALR 681 (2462)
Q Consensus 602 lv~~a~l~~l~~~lC~P~seTT~~~~f~~ll~~va~~gr~lf~Lf~hp~~~i~~~aglimrai~Ee~~~~a~~mq~~AL~ 681 (2462)
--..+++|+|....+-|-.-..++ .+=.+||-.|.|+-.+|++++--.+.++.
T Consensus 351 ASTgSVMdLLAkL~s~p~~a~~dp-----------~LVPRL~PFLRHtITSVR~AVL~TL~tfL---------------- 403 (800)
T 3oc3_A 351 VSKTSNLSLLTKIYRENPELSIPP-----------ERLKDIFPCFTSPVPEVRTSILNMVKNLS---------------- 403 (800)
T ss_dssp TTHHHHHHHHHHHHHHCTTCCCCS-----------GGGGGTGGGGTCSSHHHHHHHHHHTTTCC----------------
T ss_pred hhhHHHHHHHHHHHcCCcccccCh-----------HHHHHHHhhhcCCcHHHHHHHHHHHHHHH----------------
Confidence 345677888888887775433332 66788999999999999999877776665
Q ss_pred hcHHHHHHHHHhcCCC-CchhHHHHHH
Q 000065 682 DGALLRHLLHAFFLPA-GERREVSRQL 707 (2462)
Q Consensus 682 eGall~HL~~A~f~~~-~~~r~lsr~L 707 (2462)
.|.+|||+.+-+-... .+-+++|.++
T Consensus 404 ~~~~LRLIFQNILLE~neeIl~lS~~V 430 (800)
T 3oc3_A 404 EESIDFLVAEVVLIEEKDEIREMAIKL 430 (800)
T ss_dssp CHHHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 6789999988776554 3457777654
No 88
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=52.68 E-value=2.1e+02 Score=38.76 Aligned_cols=76 Identities=18% Similarity=0.315 Sum_probs=48.4
Q ss_pred CCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHHhhCcHHHHHHHhcCchhhHHHhhcccCcCcccc
Q 000065 2136 GGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSALEQTTETPELV 2215 (2462)
Q Consensus 2136 GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~KfLP~~fvdamrdsp~~a~v~~fes~~EnPELI 2215 (2462)
|...||+.++... .+.++.+|..|+-+|++.....- . -+|+.--..+|+. ++..+. +.
T Consensus 45 ~~~~~l~~il~~~-~~~~~~vR~~a~~~Lkn~i~~~w--~--------~~~~~~~~~ik~~----ll~~l~---~~---- 102 (852)
T 4fdd_A 45 DFNNYLIFVLTKL-KSEDEPTRSLSGLILKNNVKAHF--Q--------NFPNGVTDFIKSE----CLNNIG---DS---- 102 (852)
T ss_dssp HHHHHHHHHHHTC-TTSCHHHHHHHHHHHHHHTTTSG--G--------GCCHHHHHHHHHH----HHTTTT---CS----
T ss_pred CHHHHHHHHHhcc-CCCChHHHHHHHHHHHHHHHHcc--C--------CCCHHHHHHHHHH----HHHHHc---CC----
Confidence 4456888888742 23478999999999998876421 1 1566555555543 233342 11
Q ss_pred cCHHHHHHHHHHHHHHHHH
Q 000065 2216 WTPAMAASLSAQISTMASD 2234 (2462)
Q Consensus 2216 Wn~~mR~~v~~~i~~~~~~ 2234 (2462)
+...|..+...|..++..
T Consensus 103 -~~~vr~~~a~~i~~ia~~ 120 (852)
T 4fdd_A 103 -SPLIRATVGILITTIASK 120 (852)
T ss_dssp -SHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHh
Confidence 245788888888877664
No 89
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=50.93 E-value=99 Score=39.23 Aligned_cols=54 Identities=17% Similarity=0.163 Sum_probs=35.2
Q ss_pred hHhhhhHHHHHHHhhCChhHHHHhhhccCCCCcchHHHHHHhccCCcch--hHHHHHHHHHhc
Q 000065 2388 ERVRLSCLRVLHQLAASTTCAEAMAATSTGTPQVVPILMKAIGWQGGSI--LALETLKRVVVA 2448 (2462)
Q Consensus 2388 ~~~~~s~l~vLh~Ls~s~~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~--~a~etl~r~~~~ 2448 (2462)
..+|..++..|..++..-- -+. ..+.++|.+++.++.....+ .|+++|.++...
T Consensus 256 ~~vR~~a~~~l~~l~~~~~-~~~------~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~ 311 (588)
T 1b3u_A 256 WRVRYMVADKFTELQKAVG-PEI------TKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCEN 311 (588)
T ss_dssp HHHHHHHHHTHHHHHHHHC-HHH------HHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhC-ccc------chhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHH
Confidence 3689999999988874210 011 11335888888887643333 788888888765
No 90
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=49.91 E-value=3.7e+02 Score=35.85 Aligned_cols=129 Identities=11% Similarity=0.094 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHhhCccchhcccccCChh-hhhcccCC-CCCCCCChhhHHHHHHHHhcCChhHHHH--------------
Q 000065 2027 QFGLTSLQNILTSNPNLASIFSTKEKLL-PLFECFSV-PFAPDSNIPQLCLNVLSLLTTCASCLEA-------------- 2090 (2462)
Q Consensus 2027 ~maL~AL~nLL~~nP~la~~~~s~~~L~-~Lf~~L~~-~~~~~~~vq~~aL~VL~~ls~n~~CVea-------------- 2090 (2462)
..++++|..+....|..-. .++. .++..+.. -...+..+...|++.+..++........
T Consensus 242 ~~a~~~l~~l~~~~~~~~~-----~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (861)
T 2bpt_A 242 AAAFGCLCKIMSKYYTFMK-----PYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYN 316 (861)
T ss_dssp HHHHHHHHHHHHHHGGGCH-----HHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhhHH
Confidence 3456777777776664211 1122 23332211 1123457888999988877654322110
Q ss_pred -HHh-hcchHHHHHHHHhhC--------cchHHHHHHHHHHhhcch--HHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHH
Q 000065 2091 -MVA-DGSSLLLLLQMLHYA--------PACREGVLHVLYALASTP--ELAWAAAKHGGVVYILELLLPSQQETPLQQRA 2158 (2462)
Q Consensus 2091 -iA~-~~~vl~~Ll~lL~~~--------p~~~~~~L~~L~aL~s~t--~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~ 2158 (2462)
+.. ...+++.++..|... +..+..+.++|..++..- .++. ..+.++...|.+ .+...|.
T Consensus 317 ~~~~~~~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~~~~~~-----~l~~~l~~~l~~----~~~~~r~ 387 (861)
T 2bpt_A 317 FALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILE-----PVLEFVEQNITA----DNWRNRE 387 (861)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGGHH-----HHHHHHHHHTTC----SSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHccHhHHH-----HHHHHHHHHcCC----CChhHHH
Confidence 000 123566666666532 234445666665555321 1111 122244444432 3578999
Q ss_pred HHHHHHHHHhc
Q 000065 2159 AAASLLGKLVG 2169 (2462)
Q Consensus 2159 ~aA~lL~km~a 2169 (2462)
.++..|+.+..
T Consensus 388 ~a~~~l~~i~~ 398 (861)
T 2bpt_A 388 AAVMAFGSIMD 398 (861)
T ss_dssp HHHHHHHHTSS
T ss_pred HHHHHHHHHHc
Confidence 99999999974
No 91
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=47.80 E-value=2.5e+02 Score=31.83 Aligned_cols=136 Identities=15% Similarity=0.143 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHhcHHhhHhhhcchhhhhhHHhhhccCCcchHHHHHHHHHHHhcCCCCCCccccCchhhhhhhhcccc
Q 000065 498 TVMGFVACLRRLLTSRTAASHVMSFPAAVGRIMGLLRNGSEGVAAEAAGLIAILIGGGSGDTNMLTDSKGEQHATMMHTK 577 (2462)
Q Consensus 498 ~~~~~~~aLrRL~as~~gf~~~~~~p~~~~~v~~~L~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~d~~~e~~~~~~~nK 577 (2462)
...+.+.||..|+.. .|-..-..++..+..|+..|+-++..|-.+|...|.+++..+
T Consensus 73 V~~~a~~~l~~la~~-l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~---------------------- 129 (242)
T 2qk2_A 73 LVAMAGKCLALLAKG-LAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYAST---------------------- 129 (242)
T ss_dssp HHHHHHHHHHHHHHH-HGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS----------------------
T ss_pred HHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC----------------------
Confidence 344567788877732 221111233456678999999999999999999999988621
Q ss_pred hhcccchhhHHHHHHhhcCCCChhHHHHHHHHHHHhhccCCCC-CCCChHHHHHHHHHHHhhhhHHHHhhCCCchhHHhH
Q 000065 578 SVLFSQQGYLIVLVNRLRPMSVSPLLSMAVVEVLETMICEPHS-ETTQYTVFVELLRQVAGLRRRLFALFGHPAESVRET 656 (2462)
Q Consensus 578 s~ll~~~~~~~~L~~~l~~~~~~alv~~a~l~~l~~~lC~P~s-eTT~~~~f~~ll~~va~~gr~lf~Lf~hp~~~i~~~ 656 (2462)
+-+.+++.|+..|.+. .+.|=..++.++..+++. ++ +......+..++. .|+.+..++...|+++
T Consensus 130 ----~~~~ll~~l~~~l~~~--~~~vr~~~l~~l~~~l~~-~~~~~~~~~~l~~l~p-------~l~~~l~D~~~~VR~~ 195 (242)
T 2qk2_A 130 ----SLEAQQESIVESLSNK--NPSVKSETALFIARALTR-TQPTALNKKLLKLLTT-------SLVKTLNEPDPTVRDS 195 (242)
T ss_dssp ----CHHHHHHHHHHHTTCS--CHHHHHHHHHHHHHHHTT-CCGGGCCHHHHHHHHH-------HHHHHHTSSCHHHHHH
T ss_pred ----CHHHHHHHHHHHHcCC--ChHHHHHHHHHHHHHHHH-cCCCCccHHHHHHHHH-------HHHHHhcCCChHHHHH
Confidence 1134667788888764 578999999999998754 21 1122344444444 4567778999999998
Q ss_pred HHHHHHHHHhh-cHH
Q 000065 657 VAVIMRTIAEE-DAI 670 (2462)
Q Consensus 657 aglimrai~Ee-~~~ 670 (2462)
|.-.|-.|+.. |.+
T Consensus 196 A~~~l~~l~~~vg~~ 210 (242)
T 2qk2_A 196 SAEALGTLIKLMGDK 210 (242)
T ss_dssp HHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHcCHH
Confidence 88877777665 543
No 92
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=45.21 E-value=5.9e+02 Score=34.00 Aligned_cols=272 Identities=12% Similarity=0.103 Sum_probs=0.0
Q ss_pred CCChhhHHHHHHHHhcCC--hhHHHHHHhhcchHHHHHHHHhhC---cchHHHHHHHHHHhhc--chHHHHHHHHcCCHh
Q 000065 2067 DSNIPQLCLNVLSLLTTC--ASCLEAMVADGSSLLLLLQMLHYA---PACREGVLHVLYALAS--TPELAWAAAKHGGVV 2139 (2462)
Q Consensus 2067 ~~~vq~~aL~VL~~ls~n--~~CVeaiA~~~~vl~~Ll~lL~~~---p~~~~~~L~~L~aL~s--~t~lvkqal~~Ggvl 2139 (2462)
+..++..+++++..+... .+-+.... ..++..++..+... ++.+..++++|..++. .+.+..+....
T Consensus 143 ~~~~r~~al~~l~~l~~~~~~~~~~~~~--~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~---- 216 (876)
T 1qgr_A 143 TEHMKESTLEAIGYICQDIDPEQLQDKS--NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERH---- 216 (876)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHGGGH--HHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHhcCHhhHHhHH--HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHH----
Q ss_pred hhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHH-hhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCH
Q 000065 2140 YILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLA-RFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTP 2218 (2462)
Q Consensus 2140 yLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~-KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~ 2218 (2462)
+++..++...+.....+|..+++.|..+... +++.+.-.+. .++| .++..+.+ =++
T Consensus 217 ~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~--~~~~~~~~~~~~l~~-~~~~~~~~--------------------~~~ 273 (876)
T 1qgr_A 217 FIMQVVCEATQCPDTRVRVAALQNLVKIMSL--YYQYMETYMGPALFA-ITIEAMKS--------------------DID 273 (876)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHHHHHHH--SGGGCHHHHTTTHHH-HHHHHHTC--------------------SSH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHH-HHHHHhcC--------------------Cch
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC----------cccccCCccccccccCCCCcEEeeeeehhhccCCCCCCCChHHHH
Q 000065 2219 AMAASLSAQISTMASDLYREQMKGR----------VVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFL 2288 (2462)
Q Consensus 2219 ~mR~~v~~~i~~~~~~~~~~Q~~~~----------~~~W~lPe~f~~y~~l~~El~VGGVYlRLFl~nP~w~LR~PK~FL 2288 (2462)
+.|....+++.+++......+..+. ...+. ..|.++
T Consensus 274 ~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~ 319 (876)
T 1qgr_A 274 EVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKF----------------------------------YAKGAL 319 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCC----------------------------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHhhhhccccccCCCccchhHH----------------------------------HHHHHH
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCchHHHHHHHHHHHHhcCchhhhhhccCCChHHHHHHHHhhccccccchhhhhcCCcc
Q 000065 2289 EGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGYVPKLVAAVAYEGRRETMSTEEVKNGNSE 2368 (2462)
Q Consensus 2289 ~~Ll~~~~~~~~~~~~e~~~~d~~ll~llt~A~v~LL~~qp~LaD~vp~lG~lpkl~~~l~~~~~~~~~~~~~~~~~~~~ 2368 (2462)
..++..++..+.....|.+.-+...-.-...++..|...-+ +.+ ++.++..+...-
T Consensus 320 ~~ll~~ll~~l~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~---~~~-----~~~~l~~l~~~l---------------- 375 (876)
T 1qgr_A 320 QYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE---DDI-----VPHVLPFIKEHI---------------- 375 (876)
T ss_dssp HHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHG---GGG-----HHHHHHHHHHHT----------------
T ss_pred HHHhHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHCc---Hhh-----HHHHHHHHHHHc----------------
Q ss_pred ccccccCCCCCCCCCCChhhHhhhhHHHHHHHhhCC---hhHHHHhhhccCCCCcchHHHHHHhccCCcch--hHHHHHH
Q 000065 2369 ADRTYESDDGSAQPVQTPQERVRLSCLRVLHQLAAS---TTCAEAMAATSTGTPQVVPILMKAIGWQGGSI--LALETLK 2443 (2462)
Q Consensus 2369 ~~~~~~~~~~~~~~~~~~~~~~~~s~l~vLh~Ls~s---~~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~--~a~etl~ 2443 (2462)
..+...+|..++..|.+++.+ ..-...+. .++|.+.++++.....+ .||.+|.
T Consensus 376 ---------------~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~~-------~~l~~l~~~l~d~~~~vr~~a~~~l~ 433 (876)
T 1qgr_A 376 ---------------KNPDWRYRDAAVMAFGCILEGPEPSQLKPLVI-------QAMPTLIELMKDPSVVVRDTAAWTVG 433 (876)
T ss_dssp ---------------TCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH-------HHHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred ---------------cCCChHHHHHHHHHHHHHHcCCCHHHHHHHHH-------HHHHHHHHHhCCCCHHHHHHHHHHHH
Q ss_pred HHHh
Q 000065 2444 RVVV 2447 (2462)
Q Consensus 2444 r~~~ 2447 (2462)
++..
T Consensus 434 ~~~~ 437 (876)
T 1qgr_A 434 RICE 437 (876)
T ss_dssp HHHH
T ss_pred HHHH
No 93
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=44.66 E-value=42 Score=37.20 Aligned_cols=75 Identities=13% Similarity=0.042 Sum_probs=48.8
Q ss_pred cccceEEEEeeceEEEecCCCCceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCc--cccccCCCCC-hHH
Q 000065 137 EWVPYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKS--KAFQAAPGTT-NSA 213 (2462)
Q Consensus 137 ~w~p~~L~Vt~~~leq~d~~~g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~--r~~l~~~~~~-~~~ 213 (2462)
+|.+|.|.|++.||-.+|+.++.++..|+.++|. +... |. .++.-|+..--.++.. .-|+|.|+.. -.+
T Consensus 76 k~~~V~L~VS~~GI~l~d~~t~~~l~~~~i~~IS---f~~~-d~----~~~~~FafIar~~~~~~~~CHvF~c~~~~A~~ 147 (168)
T 3f0w_A 76 KSVKSVLWVSADGLRVVDDKTKDLLVDQTIEKVS---FCAP-DR----NLDKAFSYICRDGTTRRWICHCFLALKDSGER 147 (168)
T ss_dssp -CEEEEEEECSSEEEEEETTTCCEEEEEEGGGEE---EEEE-CS----SCTTEEEEEEEETTTTEEEEEEEEESSSCHHH
T ss_pred CCcEEEEEEECCEEEEEeCCCCeEEEeeecCcEE---EEec-CC----CCCcEEEEEEecCCCCcEEEEEEEeccchHHH
Confidence 4889999999999999999999999999999886 4321 21 1234555321222222 3688888522 444
Q ss_pred HHHHHH
Q 000065 214 IVSSLT 219 (2462)
Q Consensus 214 ii~~i~ 219 (2462)
|+..|-
T Consensus 148 I~~aIg 153 (168)
T 3f0w_A 148 LSHAVG 153 (168)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555553
No 94
>1j0w_A Downstream of tyrosine kinase 5; beta strands, ALFA helix, transferase; 2.50A {Homo sapiens} SCOP: b.55.1.2
Probab=43.95 E-value=50 Score=34.20 Aligned_cols=70 Identities=20% Similarity=0.162 Sum_probs=50.4
Q ss_pred cceEEEEeeceEEEecCCC-CceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCcc----ccccCCCCChHH
Q 000065 139 VPYKLKVTYVGVELTDLRS-GDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKSK----AFQAAPGTTNSA 213 (2462)
Q Consensus 139 ~p~~L~Vt~~~leq~d~~~-g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~r----~~l~~~~~~~~~ 213 (2462)
-|+.|++|+.+|...|+.+ +.++..++|+.+...+- | .+.|.+. -|+.+- +|.|.+. +-++
T Consensus 21 G~~~L~l~~~~l~L~~~~~~~~~l~~Wp~~~LRRyG~----~-------~~~FsFE--aGRrC~tG~G~f~F~~~-~~~~ 86 (103)
T 1j0w_A 21 GECALQITYEYICLWDVQNPRVKLISWPLSALRRYGR----D-------TTWFTFE--AGRMCETGEGLFIFQTR-DGEA 86 (103)
T ss_dssp EEEEEEECSSEEEEEESSSTTBEEEEEEGGGEEEEEE----C-------SSEEEEE--ECSSSSSCSEEEEEECS-CHHH
T ss_pred ccEEEEECCCEEEEEecCCCCcceEEeeHHHHhhcCc----c-------CCEEEEE--eCCCCCCCCcEEEEEcC-CHHH
Confidence 3789999999999998865 46899999999885443 3 3677663 454333 7888874 6667
Q ss_pred HHHHHHHHH
Q 000065 214 IVSSLTKTA 222 (2462)
Q Consensus 214 ii~~i~~~A 222 (2462)
|.+.+..++
T Consensus 87 If~~v~~ai 95 (103)
T 1j0w_A 87 IYQKVHSAA 95 (103)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877775443
No 95
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=43.63 E-value=86 Score=34.44 Aligned_cols=83 Identities=11% Similarity=0.064 Sum_probs=55.4
Q ss_pred cCCccc---ceEEEEeeceEEEecCCCCceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCccc--cccCCC
Q 000065 134 RNSEWV---PYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKSKA--FQAAPG 208 (2462)
Q Consensus 134 ~k~~w~---p~~L~Vt~~~leq~d~~~g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~r~--~l~~~~ 208 (2462)
.++-|- ...|.|...+|-.+||.|..++.+|+-..|. +.....+. +-...|++.--.+..+|. |+|.|+
T Consensus 47 ~~~~wg~gq~~~L~v~~~tlrLvD~~tk~~L~~~pI~~I~---f~~~gr~~---~~~~dFAfv~rd~~t~~~~CHvFrCe 120 (148)
T 3d8d_A 47 MSGGWGEGKDLLLQLEDETLKLVEPQSQALLHAQPIISIR---VWGVGRDS---GRERDFAYVARDKLTQMLKCHVFRCE 120 (148)
T ss_dssp TSTTCSTTCEEEEEEETTEEEEECTTTCCEEEEEEGGGCC---EEEECCCC-----CCEEEEEEECTTTCCEEEEEEEES
T ss_pred cccccccCceEEEEEcCCeEEEecCCCCceEEEeeEEEEE---EEeCCCCC---CccccEEEEEecCCCcceEeEEEEcC
Confidence 357777 6999999999999999999999999999886 54322221 011148764334555554 889997
Q ss_pred CChHHHHHHHHHHH
Q 000065 209 TTNSAIVSSLTKTA 222 (2462)
Q Consensus 209 ~~~~~ii~~i~~~A 222 (2462)
..-..|-+++.+.-
T Consensus 121 ~~a~~Ia~al~~~c 134 (148)
T 3d8d_A 121 APAKNIATSLHEIC 134 (148)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHH
Confidence 44444555554443
No 96
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=42.64 E-value=51 Score=36.95 Aligned_cols=76 Identities=13% Similarity=0.224 Sum_probs=53.5
Q ss_pred cccccEEEEEecCe-----eee----eCC-CCcccccccccccccccccccccCCCCCCcEEEEEeecCCCcccceeeeh
Q 000065 33 RGRYKRILCISNAT-----IIT----LDP-NTLAVTNSYEVASDFEGATPIIGRDDNANEFNISVRTDGRGKFKAFKFSS 102 (2462)
Q Consensus 33 rgkYkRIf~Ig~~~-----i~T----~nP-~tl~vTN~W~y~~d~~~i~p~~~~~~~~~eF~i~~rk~~~~K~~~mkFss 102 (2462)
-+|.+|++|++... |.- .|. .++.+--+|+. .|+-.|.-. ...+.+|+|++.| ...=..-+.
T Consensus 62 ~~KK~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L-~ELk~Ie~~---~~~~~gF~ltl~K----~Y~W~a~s~ 133 (171)
T 3hie_A 62 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQL-TELVRVEKD---LEISEGFILTMSK----KYYWETNSA 133 (171)
T ss_dssp GGEEEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEG-GGCCEEEEC---SSCTTEEEEESSS----EEEEECSSH
T ss_pred CCccceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeec-ccceeeecc---CCCCCcEEEEeCC----eEEEecCCH
Confidence 46889999986553 322 334 45899999999 788877753 1246799999843 333333446
Q ss_pred hhhhHHHHHHHHhh
Q 000065 103 RFRASILTELHRIR 116 (2462)
Q Consensus 103 ~~Ra~lLT~l~r~r 116 (2462)
..|...++.|.++.
T Consensus 134 ~Er~~FI~sL~K~y 147 (171)
T 3hie_A 134 KERTVFIKSLITLY 147 (171)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88999999999976
No 97
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A
Probab=42.60 E-value=62 Score=35.25 Aligned_cols=80 Identities=13% Similarity=0.037 Sum_probs=55.7
Q ss_pred ccCCccc-ceEEEEeeceEEEecCCCCceEEEeeccCCCcc-ceeeeccccCCCCCCCcEEEeeccC--CCccccccCCC
Q 000065 133 RRNSEWV-PYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSP-AIVLLSDAYGKRSETGGFVLCPLYG--RKSKAFQAAPG 208 (2462)
Q Consensus 133 ~~k~~w~-p~~L~Vt~~~leq~d~~~g~~~~~y~y~d~~~~-~i~~l~d~~~~~~~~~gfvl~~~~g--~~~r~~l~~~~ 208 (2462)
+.++-|. ...|+|++.+|..+|+.||+.+=+|+...|..+ ++..... |++=++|.---+ ++.-+|+|.|.
T Consensus 42 ~kg~iW~Q~m~L~v~~~~v~LlD~et~eelE~fpl~~I~~~~av~~~~~------y~siLllv~q~~~~~~~~iH~FQc~ 115 (140)
T 2cy5_A 42 SQGRVWAQEMLLRVSPSQVTLLDPVSKEELESYPLDAIVRCDAVMPRGR------SRSLLLLVCQEPERAQPDVHFFQGL 115 (140)
T ss_dssp HTTCCCCEEEEEEECSSEEEEECTTTCCEEEEEEGGGEEEEEEECCSSC------SSCEEEEEECCTTCSSCEEEEEEEC
T ss_pred HcCCcccceeEEEECCCeEEEEccCccchhhcCChhhceeccccCCccc------cCcEEEEEEecCCCCCccEEEEEec
Confidence 4688999 999999999999999999999999999999865 3322222 355555421112 34559999986
Q ss_pred CChHH-HHHHH
Q 000065 209 TTNSA-IVSSL 218 (2462)
Q Consensus 209 ~~~~~-ii~~i 218 (2462)
.-..+ |...|
T Consensus 116 ev~A~~v~~di 126 (140)
T 2cy5_A 116 LLGAELIREDI 126 (140)
T ss_dssp TTHHHHHHHHH
T ss_pred cccHHHHHHHH
Confidence 33334 33444
No 98
>1syx_B CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2, CD; GYF-domain, thioredoxin-like, spliceosomal proteins, transla immune system complex; 2.35A {Homo sapiens} SCOP: d.76.1.1 PDB: 1gyf_A 1l2z_A
Probab=42.54 E-value=21 Score=35.89 Aligned_cols=51 Identities=14% Similarity=0.195 Sum_probs=42.7
Q ss_pred cceeEee---cCCCcccccccHHHHHHHHhcCCcCcCCceecccCc--chhhhhhh
Q 000065 1171 FKEWMFI---DKDGAQVGPVEKDAIRRFWSKKAIDWTTRCWASGML--DWKKLRDI 1221 (2462)
Q Consensus 1171 ~KEWyy~---~~~g~~~GPvs~~eLk~l~~~g~I~~~T~~Wa~Gm~--~W~~l~~i 1221 (2462)
.+.|.|- +.+|+-.||||-.+|+.-.+.|-.+..-.|+..|.+ .|.++..|
T Consensus 25 ~~~WeYKW~~~~~~~i~GPfs~~eM~~W~~~GYF~~~v~vRrvg~~~~~Fy~~~rI 80 (86)
T 1syx_B 25 DVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRI 80 (86)
T ss_dssp CCEEEEESSSSSSSCCEEEEEHHHHHHHHHTTSCTTCCEEEESSSTTCCCEEGGGC
T ss_pred cceEEEEecCCCCCcccCCcCHHHHHHHHHCCCcCCCeEEEEecCCCCceEEeeee
Confidence 4889997 556889999999999999999999988888888833 58877665
No 99
>1wgu_A APBB2, amyloid beta (A4) precursor protein-bindin, family B, member 2; phosphotyrosine-interaction domain, amyloid disease, structural genomics; NMR {Mus musculus} SCOP: b.55.1.2 PDB: 2roz_B
Probab=41.18 E-value=89 Score=33.78 Aligned_cols=75 Identities=8% Similarity=0.130 Sum_probs=48.9
Q ss_pred CCcccceEEEEeeceEEEecCCC-CceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCcc--ccccCCCCCh
Q 000065 135 NSEWVPYKLKVTYVGVELTDLRS-GDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKSK--AFQAAPGTTN 211 (2462)
Q Consensus 135 k~~w~p~~L~Vt~~~leq~d~~~-g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~r--~~l~~~~~~~ 211 (2462)
+..|.+|.|.|++.||..+|..+ +++++-..-++|. +..+ |. .+--|.+.--.+ ..| -|+|-|+.+-
T Consensus 50 ~~~~~~v~l~Vs~~gi~v~~~~~~~~~l~~~~l~~IS---Fc~~-d~-----~~k~FaFI~~~~-~~~f~CHvF~c~~~A 119 (136)
T 1wgu_A 50 KEDWPSVNMNVADATVTVISEKNEEEVLVECRVRFLS---FMGV-GK-----DVHTFAFIMDTG-NQRFECHVFWCEPNA 119 (136)
T ss_dssp TTTSCEEEEEEETTEEEEECSSCSSCEEEEEETTTEE---EEEE-CS-----STTCEEEEEECS-SSCEEEEEEECSSCT
T ss_pred cccCceEEEEEccCEEEEEecCCCCceeccceEEEee---eEec-CC-----CCcEEEEEEcCC-CccEEEEEEEcCcch
Confidence 45699999999999999999877 5888887766664 5543 32 133444321223 333 5777787555
Q ss_pred HHHHHHHH
Q 000065 212 SAIVSSLT 219 (2462)
Q Consensus 212 ~~ii~~i~ 219 (2462)
.+|-+.|.
T Consensus 120 ~~vs~aV~ 127 (136)
T 1wgu_A 120 ANVSEAVQ 127 (136)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555554
No 100
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=40.58 E-value=1.6e+02 Score=34.09 Aligned_cols=126 Identities=10% Similarity=0.196 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHhcHHhhHhhhcchhhhhhHHhhhccCCcchHHHHHHHHHHHhcCCCCCCccccCch-hhhhhhhccc
Q 000065 498 TVMGFVACLRRLLTSRTAASHVMSFPAAVGRIMGLLRNGSEGVAAEAAGLIAILIGGGSGDTNMLTDSK-GEQHATMMHT 576 (2462)
Q Consensus 498 ~~~~~~~aLrRL~as~~gf~~~~~~p~~~~~v~~~L~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~d~~-~e~~~~~~~n 576 (2462)
.....+.|||=|+-.+.|+..+..-|..+..+..+|...+..+...|+++|.++.- .++. .. ++.--+.+-+
T Consensus 70 ~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~~lc~-~~~~------~G~~~~VL~Al~~ 142 (233)
T 2f31_A 70 NQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCI-LPQP------EDMNERVLEAMTE 142 (233)
T ss_dssp HHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHHHHHT-CSSS------SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHh-CCCC------CChHHHHHHHHHH
Confidence 34457999999999999999999999999999999998888899999999998543 2221 01 2221111112
Q ss_pred chhcccchhhHHHHHHhhcCCCChhHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHHH
Q 000065 577 KSVLFSQQGYLIVLVNRLRPMSVSPLLSMAVVEVLETMICEPHSETTQYTVFVELLRQVA 636 (2462)
Q Consensus 577 Ks~ll~~~~~~~~L~~~l~~~~~~alv~~a~l~~l~~~lC~P~seTT~~~~f~~ll~~va 636 (2462)
.+. ++.+..++.|++.++..+. .=...+.+.|+-..+..| .|-.....+-.+.-
T Consensus 143 ~~~-~~e~~RF~~lv~~l~~~~~-~e~~~~~m~lIN~li~~~----~dl~~R~~lR~ef~ 196 (233)
T 2f31_A 143 RAE-MDEVERFQPLLDGLKSGTS-IALKVGCLQLINALITPA----EELDFRVHIRSELM 196 (233)
T ss_dssp HHH-HHTSCTTHHHHHTTSTTSC-HHHHHHHHHHHHHHHTTC----CCHHHHHHHHHHHH
T ss_pred HHH-hCCcchHHHHHHHHhcCCh-HHHHHHHHHHHHHHHCCC----CCHHHHHHHHHHHH
Confidence 222 3566678889998876433 233455666777777554 35565556655553
No 101
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=39.49 E-value=88 Score=32.99 Aligned_cols=65 Identities=15% Similarity=0.089 Sum_probs=44.8
Q ss_pred CcccceEEEEeeceEEEecCCCCceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCc--cccccCCC
Q 000065 136 SEWVPYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKS--KAFQAAPG 208 (2462)
Q Consensus 136 ~~w~p~~L~Vt~~~leq~d~~~g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~--r~~l~~~~ 208 (2462)
.+|.++.|.|++.||-.+|+.++.++..|+.+.|. +.. .|. .++.-|+...-.+... .-|+|.|.
T Consensus 41 ~~~~~v~L~Vs~~gi~l~d~~~~~~~~~~~i~~Is---f~~-~d~----~~~~~FafI~r~~~~~~~~CHvF~c~ 107 (137)
T 3so6_A 41 KKLQKVTLKVSPRGIILTDSLTSQLIENVSIYRIS---YCT-ADK----MHDKVFAYIAQSQQNESLECHAFLCT 107 (137)
T ss_dssp SCCEEEEEEEETTEEEEEETTTCCEEEEEEGGGEE---EEE-ECS----SSTTEEEEEEECSSSSCEEEEEEECS
T ss_pred CCCCEEEEEEeCCeEEEEECCCCcEEEeeccCEEE---EEE-ecC----CCCCEEEEEEEcCCCCeEEEEEEEeC
Confidence 36789999999999999999999999999988885 332 121 1245665432222222 46888874
No 102
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=39.48 E-value=3.8e+02 Score=33.43 Aligned_cols=133 Identities=13% Similarity=0.234 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHhcHHhhHhhhcchhhhhhHHhhhccCCcchHHHHHHHHHHHhcCCCCCCccccCchhhhh-hhhcccch
Q 000065 500 MGFVACLRRLLTSRTAASHVMSFPAAVGRIMGLLRNGSEGVAAEAAGLIAILIGGGSGDTNMLTDSKGEQH-ATMMHTKS 578 (2462)
Q Consensus 500 ~~~~~aLrRL~as~~gf~~~~~~p~~~~~v~~~L~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~d~~~e~~-~~~~~nKs 578 (2462)
-..+.|||=|+-.+.|+..+..-|..+..++.+|...+..+...|+++|.++.- .++..+ .++.- .++.+-|.
T Consensus 138 ~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~~lc~-~~~~~g-----G~~~VL~Al~~~~~ 211 (383)
T 3eg5_B 138 HEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCI-LPQPED-----MNERVLEAMTERAE 211 (383)
T ss_dssp HHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHT-CCSSTT-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhCCCchHHHHHHHHHHHHHHh-CcCcCC-----cHHHHHHHHHHHHH
Confidence 347999999999999999999999999999999999999999999999988653 221000 11111 11222232
Q ss_pred hcccchhhHHHHHHhhcCCCChhHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHH--HhhhhHHHHh
Q 000065 579 VLFSQQGYLIVLVNRLRPMSVSPLLSMAVVEVLETMICEPHSETTQYTVFVELLRQV--AGLRRRLFAL 645 (2462)
Q Consensus 579 ~ll~~~~~~~~L~~~l~~~~~~alv~~a~l~~l~~~lC~P~seTT~~~~f~~ll~~v--a~~gr~lf~L 645 (2462)
.+....+..|++-|+....-.+ ..+.+.|+-..+..| .|-.....+-.+. +++.+-|=+|
T Consensus 212 --~~e~~RF~~lv~~L~~~~~~e~-~~~~m~lIN~li~~~----~dl~~R~~lR~ef~~~Gl~~il~~l 273 (383)
T 3eg5_B 212 --MDEVERFQPLLDGLKSGTSIAL-KVGCLQLINALITPA----EELDFRVHIRSELMRLGLHQVLQEL 273 (383)
T ss_dssp --HHTSCTTHHHHHTTSTTSCHHH-HHHHHHHHHHHHTTC----CCHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred --hCCCCcHHHHHHHHHccCcHHH-HHHHHHHHHHHHcCC----CCHHHHHHHHHHHHHCChHHHHHHH
Confidence 4666778899999987544333 345566777777655 3667777777666 4444444443
No 103
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=37.52 E-value=30 Score=42.80 Aligned_cols=81 Identities=14% Similarity=0.302 Sum_probs=57.8
Q ss_pred EEEEEEeecccccc---cEEEEEecCeeeeeCCCCcccccccccccccccccccccCCCCCCcEEEEEeecCCCccccee
Q 000065 23 ARYLVVKHSWRGRY---KRILCISNATIITLDPNTLAVTNSYEVASDFEGATPIIGRDDNANEFNISVRTDGRGKFKAFK 99 (2462)
Q Consensus 23 a~y~vtKhSWrgkY---kRIf~Ig~~~i~T~nP~tl~vTN~W~y~~d~~~i~p~~~~~~~~~eF~i~~rk~~~~K~~~mk 99 (2462)
+.|+..|..-+|+- ..++.|+..||..||+.|-++...|+| ++|..++.. .+.|+|.+... +..++.
T Consensus 281 ~~~f~vk~~~~g~~~~~~~~LgI~~~GI~v~~~~~k~~l~~~~~-~~I~~~~~~------~~~f~I~~~~~---~~~~~~ 350 (371)
T 3ivf_A 281 VSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSL-TNIKRWAAS------PKSFTLDFGDY---QDGYYS 350 (371)
T ss_dssp CEEEEEEEECTTSSCEEEEEEEECSSEEEEEETTTCCEEEEEEG-GGCCEEEEE------TTEEEEECGGG---SSSCEE
T ss_pred cEEEEEEEeccCCCCCccEEEEEcCCcEEEEcCCCCceEEeeeh-hheeeeecC------CCEEEEEECCc---cCcEEE
Confidence 45666664444432 478999999999999999999999999 799888762 46899998532 224577
Q ss_pred eehhhhhHHHHHHHH
Q 000065 100 FSSRFRASILTELHR 114 (2462)
Q Consensus 100 Fss~~Ra~lLT~l~r 114 (2462)
|.|.. ++-+.+|..
T Consensus 351 ~~T~~-~~~I~~Li~ 364 (371)
T 3ivf_A 351 VQTTE-GEQIAQLIA 364 (371)
T ss_dssp EECSC-HHHHHHHHH
T ss_pred EECCh-HHHHHHHHH
Confidence 87754 344455544
No 104
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} SCOP: b.55.1.0 PDB: 3dxd_A 3dxc_A
Probab=35.39 E-value=66 Score=34.98 Aligned_cols=76 Identities=8% Similarity=0.142 Sum_probs=50.8
Q ss_pred CCcccceEEEEeeceEEEecCCCCceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCcc--ccccCCCCChH
Q 000065 135 NSEWVPYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKSK--AFQAAPGTTNS 212 (2462)
Q Consensus 135 k~~w~p~~L~Vt~~~leq~d~~~g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~r--~~l~~~~~~~~ 212 (2462)
+..|.||.|.|.+.||..+|+.+.++++-..-++|. +..+ |. +.--|.+.--.| ..| =|.|-|+.+-.
T Consensus 42 ~~~~~~v~l~Vs~~gi~v~~~~t~e~l~~~~i~~IS---Fcg~-~k-----d~k~FafI~~~~-~~~f~CHvF~c~~~A~ 111 (140)
T 3dxe_A 42 REQWTPSHVSVAPATLTILHQQTEAVLGECRVRFLS---FLAV-GR-----DVHTFAFIMAAG-PASFCCHMFWCEPNAA 111 (140)
T ss_dssp GGGCEEEEEEECSSEEEEEETTTCCEEEEEEGGGEE---EEEE-CS-----STTEEEEEEEEE-TTEEEEEEEEEESCSH
T ss_pred cCCCceEEEEEcCCEEEEEecCCcceeeeccEEEEe---eecc-CC-----CCcEEEEEecCC-CccEEEEEEecCcchH
Confidence 347999999999999999999899999988777774 5543 32 245665432223 333 46666765554
Q ss_pred HHHHHHHH
Q 000065 213 AIVSSLTK 220 (2462)
Q Consensus 213 ~ii~~i~~ 220 (2462)
+|...+.+
T Consensus 112 ~vs~aV~~ 119 (140)
T 3dxe_A 112 SLSEAVQA 119 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555543
No 105
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=34.91 E-value=53 Score=36.31 Aligned_cols=71 Identities=11% Similarity=0.058 Sum_probs=50.0
Q ss_pred CcccceEEEEeeceEEEecCCCCceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccC------CCccccccCCCC
Q 000065 136 SEWVPYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYG------RKSKAFQAAPGT 209 (2462)
Q Consensus 136 ~~w~p~~L~Vt~~~leq~d~~~g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g------~~~r~~l~~~~~ 209 (2462)
..|..|.|.|.+.||..+|+.|++++..++.+.|. +. +|. +.-|+.+ ... ....-|+|.|+
T Consensus 50 ~~~~~V~L~IS~~gIkv~d~~t~~~i~~~~l~~IS---f~--a~~------~~~f~fI-ar~~~~~~~~~~~CHVF~~~- 116 (162)
T 4dbb_A 50 QPMTEVDLFISTQRIKVLNADTQEPMMDHPLRTIS---YI--ADI------GNIVVLM-ARRRMPRSQYKMICHVFESE- 116 (162)
T ss_dssp CCCEEEEEEEESSEEEEEETTTCCEEEEEEGGGEE---EE--EEE------TTEEEEE-EEECCSTTCEEEEEEEEECT-
T ss_pred CCCcEEEEEEECCEEEEEECCCCcEEeeeecceeE---EE--EEC------CCEEEEE-eccCCCCCCCcEEEEEEECC-
Confidence 45789999999999999999999999999999886 43 343 2445432 111 13347888886
Q ss_pred ChHHHHHHHH
Q 000065 210 TNSAIVSSLT 219 (2462)
Q Consensus 210 ~~~~ii~~i~ 219 (2462)
+-++|+..|-
T Consensus 117 ~A~~I~~tig 126 (162)
T 4dbb_A 117 DAQLIAQSIG 126 (162)
T ss_dssp THHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4555655553
No 106
>1p5t_A DOK1, docking protein 1; signaling protein; 2.35A {Mus musculus} SCOP: b.55.1.2 PDB: 1uef_A*
Probab=34.52 E-value=63 Score=34.64 Aligned_cols=70 Identities=16% Similarity=0.176 Sum_probs=50.7
Q ss_pred ceEEEEeeceEEEecC----CCCceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCcc----ccccCCCCCh
Q 000065 140 PYKLKVTYVGVELTDL----RSGDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKSK----AFQAAPGTTN 211 (2462)
Q Consensus 140 p~~L~Vt~~~leq~d~----~~g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~r----~~l~~~~~~~ 211 (2462)
++.|+|++..|...|+ .+.++++.++|+.|...+. |. +-|.+. -|+.+- +|.|.+. +.
T Consensus 26 ~y~L~vt~~~l~L~~~~~~~~~~~~l~~Wp~~~LRryG~----d~-------~~FsFE--aGRrC~tGeG~f~F~t~-~~ 91 (127)
T 1p5t_A 26 SYILRVEAEKLTLLTLGAQSQILEPLLFWPYTLLRRYGR----DK-------VMFSFE--AGRRCPSGPGTFTFQTS-QG 91 (127)
T ss_dssp EEEEEECSSEEEEEEECTTTCSEEEEEEEEGGGEEEEEE----CS-------SEEEEE--ECTTSTTCSEEEEEECS-CH
T ss_pred cEEEEEcCCEEEEEecCcccCCCcceEEEehHHhhhcCc----cC-------CEEEEE--ecCCCCCCCcEEEEEeC-CH
Confidence 8999999999999984 3567899999999986553 42 455552 454433 7888884 77
Q ss_pred HHHHHHHHHHHh
Q 000065 212 SAIVSSLTKTAK 223 (2462)
Q Consensus 212 ~~ii~~i~~~A~ 223 (2462)
++|.+.|..+.+
T Consensus 92 ~~If~~l~~~i~ 103 (127)
T 1p5t_A 92 NDIFQAVEAAIQ 103 (127)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 788877765433
No 107
>2ysz_A Amyloid beta A4 precursor protein-binding family B member 2 and amyloid beta A4 protein...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus}
Probab=34.44 E-value=93 Score=35.33 Aligned_cols=75 Identities=8% Similarity=0.130 Sum_probs=48.9
Q ss_pred CCcccceEEEEeeceEEEecCCC-CceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCcc--ccccCCCCCh
Q 000065 135 NSEWVPYKLKVTYVGVELTDLRS-GDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKSK--AFQAAPGTTN 211 (2462)
Q Consensus 135 k~~w~p~~L~Vt~~~leq~d~~~-g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~r--~~l~~~~~~~ 211 (2462)
+..|.+|.|.|++.||..+|..+ +++++-..-+.|. +..+ |. ..-.|.+.--.+ ..| -|+|.|+.+-
T Consensus 50 ~~k~~~V~L~VS~~gI~v~d~~t~~e~l~~~~I~~IS---Fc~v-d~-----d~k~FaFI~~~~-~~~f~CHVF~c~k~A 119 (185)
T 2ysz_A 50 KEDWPSVNMNVADATVTVISEKNEEEVLVECRVRFLS---FMGV-GK-----DVHTFAFIMDTG-NQRFECHVFWCEPNA 119 (185)
T ss_dssp TTTSCEEEEEEETTEEEEEESSCSSCEEEEECTTTCC---EEEC-CS-----STTEEEEEEESS-SSCEEEEEEEESSCS
T ss_pred cccCceEEEEEecCEEEEEecCCCcceeeeccEEEee---eecc-CC-----CCcEEEEEecCC-CccEEEEEEEccCch
Confidence 45799999999999999999876 5788887766664 5543 32 244665432223 333 4667676444
Q ss_pred HHHHHHHH
Q 000065 212 SAIVSSLT 219 (2462)
Q Consensus 212 ~~ii~~i~ 219 (2462)
.+|-..|.
T Consensus 120 ~~vs~aV~ 127 (185)
T 2ysz_A 120 ANVSEAVQ 127 (185)
T ss_dssp TTHHHHHH
T ss_pred HHHHHHHH
Confidence 45555554
No 108
>2yt0_A Amyloid beta A4 protein and amyloid beta A4 precursor protein-binding family B member...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus} PDB: 2yt1_A
Probab=34.42 E-value=89 Score=35.25 Aligned_cols=92 Identities=8% Similarity=0.075 Sum_probs=57.8
Q ss_pred hhhHHHHHHHHh-hhhhcccccCCccccccccCCcccceEEEEeeceEEEecCCC-CceEEEeeccCCCccceeeecccc
Q 000065 104 FRASILTELHRI-RWVRLNAVAEFPVLHLRRRNSEWVPYKLKVTYVGVELTDLRS-GDLRWCLDFRDMDSPAIVLLSDAY 181 (2462)
Q Consensus 104 ~Ra~lLT~l~r~-r~~~~~~~~~~~~~~~~~~k~~w~p~~L~Vt~~~leq~d~~~-g~~~~~y~y~d~~~~~i~~l~d~~ 181 (2462)
--.+++.++.+- +. +..+.+|.+|.|.|++.||..+|..+ .++++-..-++|. |..+ |.
T Consensus 78 ~G~dVl~~AI~kl~~--------------~~~~~~~~~V~L~VS~~gI~v~d~~t~~evl~~c~l~~IS---Fcgv-d~- 138 (176)
T 2yt0_A 78 VGMDTLNSAIENLMT--------------SSSKEDWPSVNMNVADATVTVISEKNEEEVLVECRVRFLS---FMGV-GK- 138 (176)
T ss_dssp SCHHHHHHHHHHHHH--------------HSCTTTSCEEEEECGGGEEEEEESSCTTCEEEEEETTTCC---EEEE-CS-
T ss_pred ccHHHHHHHHHHHHh--------------ccCcccCcceEEEEcCCEEEEEecCCCcceecccceEEee---eEcc-CC-
Confidence 346777777653 31 11245699999999999999999887 5888888877775 5543 32
Q ss_pred CCCCCCCcEEEeeccCCCcc--ccccCCCCChHHHHHHHH
Q 000065 182 GKRSETGGFVLCPLYGRKSK--AFQAAPGTTNSAIVSSLT 219 (2462)
Q Consensus 182 ~~~~~~~gfvl~~~~g~~~r--~~l~~~~~~~~~ii~~i~ 219 (2462)
..--|.+.--.+ ..| -|+|.|+.+-.+|-+.|.
T Consensus 139 ----d~k~FaFI~~~~-~~~f~CHVF~cek~A~~ls~aI~ 173 (176)
T 2yt0_A 139 ----DVHTFAFIMDTG-NQRFECHVFWCEPNAANVSEAVQ 173 (176)
T ss_dssp ----STTEEEEEEEEE-TTEEEEEEEEESSCSHHHHHHHH
T ss_pred ----CCcEEEEEEeCC-CCCEEEEEEEccCChhHHHHHHH
Confidence 134444331223 233 577778755555555443
No 109
>2v76_A Docking protein 1; alternative splicing, protein-binding, PTB domain, phosphorylation, adaptor protein; HET: PGE; 1.60A {Homo sapiens}
Probab=33.75 E-value=64 Score=33.63 Aligned_cols=70 Identities=14% Similarity=0.170 Sum_probs=49.8
Q ss_pred ceEEEEeeceEEEecC----CCCceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCcc----ccccCCCCCh
Q 000065 140 PYKLKVTYVGVELTDL----RSGDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKSK----AFQAAPGTTN 211 (2462)
Q Consensus 140 p~~L~Vt~~~leq~d~----~~g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~r----~~l~~~~~~~ 211 (2462)
++.|+|++.+|...++ .+++.++.++|+.|...+. |. +-|.+. -|+.+- +|.|.+. +.
T Consensus 24 ~y~L~v~~~~l~L~~~~~~~~~~~~~~~Wp~~~LRryG~----d~-------~~FsFE--aGRrc~tG~G~f~F~~~-~~ 89 (107)
T 2v76_A 24 SYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGR----DK-------VMFSFE--AGRRCPSGPGTFTFQTA-QG 89 (107)
T ss_dssp EEEEEECSSEEEEEEEC----CEEEEEEEEGGGEEEEEE----CS-------SEEEEE--ECTTSTTCSEEEEEECS-CH
T ss_pred cEEEEEcCCEEEEEecCccCCCCceeEEEEhHHhhhcCc----cC-------CEEEEE--ecCCCCCCCcEEEEEeC-CH
Confidence 7999999999999874 4567899999999986553 42 455552 454333 7888884 77
Q ss_pred HHHHHHHHHHHh
Q 000065 212 SAIVSSLTKTAK 223 (2462)
Q Consensus 212 ~~ii~~i~~~A~ 223 (2462)
++|.+.|..+.+
T Consensus 90 ~~If~~l~~~i~ 101 (107)
T 2v76_A 90 NDIFQAVETAIH 101 (107)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 788887765533
No 110
>2dlw_A Docking protein 2, isoform A; IRS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.53 E-value=52 Score=34.63 Aligned_cols=69 Identities=19% Similarity=0.253 Sum_probs=52.2
Q ss_pred ceEEEEeeceEEE-ecCCCCceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCcc----ccccCCCCChHHH
Q 000065 140 PYKLKVTYVGVEL-TDLRSGDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKSK----AFQAAPGTTNSAI 214 (2462)
Q Consensus 140 p~~L~Vt~~~leq-~d~~~g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~r----~~l~~~~~~~~~i 214 (2462)
++.|+|++.+|.. .|+.++.++...+|+.|...+. | .+-|.+. -|+.+- +|.|.+. +-++|
T Consensus 29 ~y~L~l~~~~l~L~~~~~~~~~l~~Wpl~~LRryG~----d-------~~~FsfE--aGRrC~tGeG~f~F~t~-~~~~i 94 (113)
T 2dlw_A 29 SYTLRAGESALELWGGPEPGTQLYDWPYRFLRRFGR----D-------KVTFSFE--AGRRCVSGEGNFEFETR-QGNEI 94 (113)
T ss_dssp EEEEEECSSBEECCCSSSSCCCSSCCBGGGCCCEEE----E-------TTEEEEE--ECSSCSSCSEEEEECCS-THHHH
T ss_pred cEEEEEcCCEEEEEecCCCCCceEEEEhHHhhhcCc----c-------CCEEEEE--ecCCCCCCCCEEEEEcC-CHHHH
Confidence 8999999999998 6888999999999999986554 3 2455552 454433 7888884 77788
Q ss_pred HHHHHHHH
Q 000065 215 VSSLTKTA 222 (2462)
Q Consensus 215 i~~i~~~A 222 (2462)
.+.|..+.
T Consensus 95 f~~l~~~i 102 (113)
T 2dlw_A 95 FLALEEAI 102 (113)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88876543
No 111
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=32.60 E-value=1.2e+02 Score=35.35 Aligned_cols=133 Identities=14% Similarity=0.150 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhhCccchhc---ccccCChhhhh-cccCCCCCCCCChhhHHHHHHHHhcCChhHH-------HHHHhhcc
Q 000065 2028 FGLTSLQNILTSNPNLASI---FSTKEKLLPLF-ECFSVPFAPDSNIPQLCLNVLSLLTTCASCL-------EAMVADGS 2096 (2462)
Q Consensus 2028 maL~AL~nLL~~nP~la~~---~~s~~~L~~Lf-~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CV-------eaiA~~~~ 2096 (2462)
.+++.|..+|..++..... +.....+..++ .++. ..+..++..++++|..+....... ...+ ..
T Consensus 28 eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~---DsN~~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~--~~ 102 (278)
T 4ffb_C 28 EAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYIT---DSNVVAQEQAIVALNSLIDAFASSSLKNAHNITLI--ST 102 (278)
T ss_dssp HHHHHHHHHHHTC----------CCTTSCTHHHHHHTT---CSSHHHHHHHHHHHHHHHTTCC---CCHHHHHHHH--HH
T ss_pred HHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHhhhhhcccchhHHHH--HH
Confidence 4678888888887764322 12223333333 2332 335567888999998776432111 1111 11
Q ss_pred hHHHHHH-HHhh-CcchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCC
Q 000065 2097 SLLLLLQ-MLHY-APACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHG 2174 (2462)
Q Consensus 2097 vl~~Ll~-lL~~-~p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhG 2174 (2462)
+++.|+. ++.. .+..+..+++++..++.. .+....+++.+....+..+|.+|..+...|.++... +|
T Consensus 103 ~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~---------~~~~~~~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~--fg 171 (278)
T 4ffb_C 103 WTPLLVEKGLTSSRATTKTQSMSCILSLCGL---------DTSITQSVELVIPFFEKKLPKLIAAAANCVYELMAA--FG 171 (278)
T ss_dssp HHHHHHHHTSSCCCHHHHHHHHHHHHHHHHT---------SSSSHHHHHHHGGGGGCSCHHHHHHHHHHHHHHHHH--HT
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHh---------cCcHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH--hC
Confidence 3333332 2322 233445566666555421 111222333333222345899999999999999875 55
Q ss_pred hH
Q 000065 2175 PR 2176 (2462)
Q Consensus 2175 Pr 2176 (2462)
++
T Consensus 172 ~~ 173 (278)
T 4ffb_C 172 LT 173 (278)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 112
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=32.10 E-value=1.8e+02 Score=33.88 Aligned_cols=166 Identities=15% Similarity=0.181 Sum_probs=0.0
Q ss_pred HHHHHHH-HHhhCccchhcccccCChh-hhhccc-CCCCCCCCChhhHHHHHHHHhcCChhHHHHHH-hhcc------hH
Q 000065 2029 GLTSLQN-ILTSNPNLASIFSTKEKLL-PLFECF-SVPFAPDSNIPQLCLNVLSLLTTCASCLEAMV-ADGS------SL 2098 (2462)
Q Consensus 2029 aL~AL~n-LL~~nP~la~~~~s~~~L~-~Lf~~L-~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA-~~~~------vl 2098 (2462)
++.+|.. ++..+|.+..+...+..+. .|-..+ .-. +..+...|+++|..++ +.+. ..-. ++
T Consensus 36 al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~---n~~v~~~A~~al~~la------~~l~~~~f~~~y~~~ll 106 (249)
T 2qk1_A 36 ALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDA---NIQAVALAAQSVELIC------DKLKTPGFSKDYVSLVF 106 (249)
T ss_dssp HHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCS---CHHHHHHHHHHHHHHH------HHHCTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCC---CHHHHHHHHHHHHHHH------HhcccccccHHHHHHHH
Q ss_pred HHHHHHHh-hCcchHHHHHHHHHHhhcchHHHHHHHHc------CCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCC
Q 000065 2099 LLLLQMLH-YAPACREGVLHVLYALASTPELAWAAAKH------GGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQP 2171 (2462)
Q Consensus 2099 ~~Ll~lL~-~~p~~~~~~L~~L~aL~s~t~lvkqal~~------GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~ 2171 (2462)
+.++..+. ..+..+..+-..|.+++.+ . +-+..+++-|...-+..++++|.++...|+++...
T Consensus 107 p~ll~~l~dkk~~V~~aa~~al~~i~~~---------~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~- 176 (249)
T 2qk1_A 107 TPLLDRTKEKKPSVIEAIRKALLTICKY---------YDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKE- 176 (249)
T ss_dssp HHHHHGGGCCCHHHHHHHHHHHHHHHHH---------SCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHH---------ccccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH-
Q ss_pred CCC---hHHHHHH-HhhCcHHHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHHHHHHH
Q 000065 2172 MHG---PRVAITL-ARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQISTMASDL 2235 (2462)
Q Consensus 2172 lhG---PrV~~~L-~KfLP~~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~~~~~~ 2235 (2462)
.+ .++...+ ..++| .+...|.|+ +.+.|....+++.+++.-+
T Consensus 177 -~~~~~~~l~~~l~~~iip-~l~~~l~D~--------------------~~~VR~aA~~~l~~i~~~v 222 (249)
T 2qk1_A 177 -EKDGYSTLQRYLKDEVVP-IVIQIVNDT--------------------QPAIRTIGFESFAILIKIF 222 (249)
T ss_dssp -CCSCSHHHHHHHTTTHHH-HHHHHHTCS--------------------SHHHHHHHHHHHHHHHHHH
T ss_pred -cCCcchhHHHHHHHHHHH-HHHHHhcCC--------------------CHHHHHHHHHHHHHHHHHh
No 113
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=30.98 E-value=54 Score=41.00 Aligned_cols=90 Identities=11% Similarity=0.102 Sum_probs=66.4
Q ss_pred hhhHHHhcCHHHHHHHHHHhhhcccCCCCCCCccceeehhhhhhhhhhccChHHHHHHHhhcchHHHHHHhhccccchhH
Q 000065 1662 GEELVRDGGIQLLSTLLSRCMCVVQKTTPAMEPSAVIVTNVMRTFSVLSQFESARTEVLQFSGLVQDIVHCTELELVPGA 1741 (2462)
Q Consensus 1662 aeeL~re~G~~~L~~~l~rC~~vl~~~s~~~~~~~~v~~~~~r~~~v~a~F~~cr~~i~~~~~l~~di~~~l~l~~~~~l 1741 (2462)
.+++. .+|+..|..++.+|..--.. ........+-..|+||+...-....++..+...+..+.-|+.|+.- ..+.+
T Consensus 103 V~~F~-~~Gl~~Ll~iL~~~~~~~~~--~~~~~d~~~q~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~s-~~~~~ 178 (383)
T 3eg5_B 103 VQTFG-AEGLASLLDILKRLHDEKEE--TSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDP-AVPNM 178 (383)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHTCC---------CHHHHHHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCCT-TSHHH
T ss_pred HHHHH-HccHHHHHHHHHHHhhcccc--ccchhhHHHHHHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhCC-CchHH
Confidence 46666 67999999999988543211 1223344556689999999999999999999999999999988763 44677
Q ss_pred HHHHHHHHHHhhCC
Q 000065 1742 VDAALQTIAHVSVS 1755 (2462)
Q Consensus 1742 ~~aALe~v~~~a~~ 1755 (2462)
...|+|.+..+|.-
T Consensus 179 ~~~aleLL~~lc~~ 192 (383)
T 3eg5_B 179 MIDAAKLLSALCIL 192 (383)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhC
Confidence 88899998887653
No 114
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=30.86 E-value=70 Score=38.52 Aligned_cols=69 Identities=20% Similarity=0.361 Sum_probs=50.7
Q ss_pred EEEEEeecccccccEEEEEecCeeeeeCCCCcc-cccccccccccccccccccCCCCCCcEEEEEeecCCCcccceeeeh
Q 000065 24 RYLVVKHSWRGRYKRILCISNATIITLDPNTLA-VTNSYEVASDFEGATPIIGRDDNANEFNISVRTDGRGKFKAFKFSS 102 (2462)
Q Consensus 24 ~y~vtKhSWrgkYkRIf~Ig~~~i~T~nP~tl~-vTN~W~y~~d~~~i~p~~~~~~~~~eF~i~~rk~~~~K~~~mkFss 102 (2462)
.|+..|.. .| =+-++.|+..||..|++++-. ..+.|+| ++|..++.. .+.|+|.++.+ +..++.|.|
T Consensus 221 ~~f~v~~~-~g-~~~~LgI~~~Gi~v~~~~~k~~~~~~f~w-~~I~~~~~~------~~~f~i~~~~~---~~~~~~f~~ 288 (314)
T 1h4r_A 221 NYFAIRNK-KG-TELLLGVDALGLHIYDPENRLTPKISFPW-NEIRNISYS------DKEFTIKPLDK---KIDVFKFNS 288 (314)
T ss_dssp EEEEEEET-TC-CEEEEEECSSEEEEECTTCSSSCSEEEEG-GGEEEEEEE------TTEEEEEESST---TSCCEEEEC
T ss_pred eEEEeecC-CC-CEEEEEEeCCceEEEeCCCCcccceEEec-ccceEEEee------CCEEEEEEcCC---CCceEEEEc
Confidence 45555532 23 578999999999999999864 6789999 799887762 35899998642 345788876
Q ss_pred hh
Q 000065 103 RF 104 (2462)
Q Consensus 103 ~~ 104 (2462)
..
T Consensus 289 ~~ 290 (314)
T 1h4r_A 289 SK 290 (314)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 115
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=30.68 E-value=4.1e+02 Score=32.82 Aligned_cols=176 Identities=18% Similarity=0.194 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHhhCccchhcccccCChhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHH
Q 000065 2026 LQFGLTSLQNILTSNPNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQML 2105 (2462)
Q Consensus 2026 l~maL~AL~nLL~~nP~la~~~~s~~~L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL 2105 (2462)
+..++..|+..++.-+.++..|++.+++..|+..... +..+++..+|..+..+=.+...-+.+.+....+..+..++
T Consensus 135 lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~---~~gN~q~Y~L~AL~~LM~~v~Gm~gvvs~~~fI~~lyslv 211 (339)
T 3dad_A 135 LRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAA---ADHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYTLC 211 (339)
T ss_dssp HHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTT---SCHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHGG
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHh---cChHHHHHHHHHHHHHHhccccccchhCCHHHHHHHHHHH
Confidence 4567888888888889999999999999888887743 3668999999999988888666666665455555555555
Q ss_pred hhC-cchHHHHHHHHHHhhc----chHHHHHHHH-----cC--CHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCC
Q 000065 2106 HYA-PACREGVLHVLYALAS----TPELAWAAAK-----HG--GVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMH 2173 (2462)
Q Consensus 2106 ~~~-p~~~~~~L~~L~aL~s----~t~lvkqal~-----~G--gvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lh 2173 (2462)
.+. +.....+|++|..++. +..+|.+++. .| -+..|+.+|-.. +....+...-+-.++.++..- .-
T Consensus 212 ~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~-~~~D~elq~~amtLIN~lL~~-ap 289 (339)
T 3dad_A 212 ASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEK-NGADPELLVYTVTLINKTLAA-LP 289 (339)
T ss_dssp GCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTT-TSCCHHHHHHHHHHHHHHHHH-CS
T ss_pred cCccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhcc-CCCCHHHHHHHHHHHHHHHhc-CC
Confidence 432 2334558888877764 4457777766 22 266778888521 234677777777778777652 12
Q ss_pred ChHHHHHHHhhCcHHHHHHHhcCchhhHHHh-hcccCcCccc
Q 000065 2174 GPRVAITLARFLPDGLVSVIRDGPGEAVVSA-LEQTTETPEL 2214 (2462)
Q Consensus 2174 GPrV~~~L~KfLP~~fvdamrdsp~~a~v~~-fes~~EnPEL 2214 (2462)
+++-+ .-+++++....-+.+|+- +......|||
T Consensus 290 d~d~~--------~di~d~Le~~gi~~~i~r~l~~~~~~~~l 323 (339)
T 3dad_A 290 DQDSF--------YDVTDALEQQGMEALVQRHLGTAGTDVDL 323 (339)
T ss_dssp SHHHH--------HHHHHHHHHTTHHHHHHHHHSCTTSCHHH
T ss_pred ChhHH--------HHHHHHHHHccHHHHHHHHHhccCCCHHH
Confidence 22211 145666666554444443 3333345555
No 116
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=30.64 E-value=1.2e+02 Score=39.02 Aligned_cols=96 Identities=17% Similarity=0.206 Sum_probs=63.2
Q ss_pred HHHhhCcchHHHHHHHHHHhhcchHHHHHHHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHH
Q 000065 2103 QMLHYAPACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLA 2182 (2462)
Q Consensus 2103 ~lL~~~p~~~~~~L~~L~aL~s~t~lvkqal~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~ 2182 (2462)
+....=|++...++++++.||. +...++|.+|.+-|-.++.| -+-+||.-+|.
T Consensus 54 kffk~FP~l~~~Ai~a~lDLcE--------------------------Ded~~IR~qaik~Lp~~ck~-~~i~kiaDvL~ 106 (507)
T 3u0r_A 54 KFFKHFPELADSAINAQLDLCE--------------------------DEDVSIRRQAIKELPQFATG-ENLPRVADILT 106 (507)
T ss_dssp HHGGGCGGGHHHHHHHHHHHHT--------------------------CSSHHHHHHHHHHGGGGCCT-TCHHHHHHHHH
T ss_pred HHHhhChhhHHHHHHHHHHHHh--------------------------cccHHHHHHHHHhhHHHhhh-hhhhhHHHHHH
Confidence 3445567777777777777663 22455666666666666666 55666666666
Q ss_pred hhCcH-----------HHHHHHhcCchhhHHHhhcccCcCcccccCHHHHHHHHHHHHH
Q 000065 2183 RFLPD-----------GLVSVIRDGPGEAVVSALEQTTETPELVWTPAMAASLSAQIST 2230 (2462)
Q Consensus 2183 KfLP~-----------~fvdamrdsp~~a~v~~fes~~EnPELIWn~~mR~~v~~~i~~ 2230 (2462)
++|-. .|++-++-+|..+.-.+|.+... . ++.+|.++-.+|..
T Consensus 107 QlLqtdd~~E~~~V~~sL~sllk~Dpk~tl~~lf~~i~~-~----~e~~Rer~lkFi~~ 160 (507)
T 3u0r_A 107 QLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQILQ-G----EDIVRERAIKFLST 160 (507)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH-S----CHHHHHHHHHHHHH
T ss_pred HHHhccchHHHHHHHHHHHHHHhcChHHHHHHHHHHHcc-c----chHHHHHHHHHHHH
Confidence 66653 78888888987665555555444 3 57888887777743
No 117
>2dyq_A Amyloid beta A4 precursor protein-binding family 3; phosphotyrosine-interaction domain (PTB/PID alzheimer'S disease, structural genomics, NPPSFA; 3.10A {Homo sapiens}
Probab=30.08 E-value=90 Score=34.13 Aligned_cols=77 Identities=13% Similarity=0.201 Sum_probs=47.7
Q ss_pred CCcccceEEEEeeceEEEecC-----CCCceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCcc--ccccCC
Q 000065 135 NSEWVPYKLKVTYVGVELTDL-----RSGDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKSK--AFQAAP 207 (2462)
Q Consensus 135 k~~w~p~~L~Vt~~~leq~d~-----~~g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~r--~~l~~~ 207 (2462)
+.+|.||.|.|++.||..+|+ .+..+++-..-++|. |.-+ | + +.--|++.--.| ..| -|+|.|
T Consensus 50 ~~~w~~v~l~Vs~~~i~v~~~~~~~~~~~~~l~~c~vr~IS---Fcgv-g---k--d~r~FaFI~~~~-~~~f~CHVF~c 119 (144)
T 2dyq_A 50 RNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVRLVT---FIGV-G---R--DPHTFGLIADLG-RQSFQCAAFWC 119 (144)
T ss_dssp SCCCEEEEEEECSSEEEEEECC------CCCSSEEEGGGEE---EEEE-C---S--STTEEEEEEECS-SSCEEEEEEEC
T ss_pred cccCcceEEEEeccceEEeccccccccccceeeeceEEEEe---eeec-C---C--CCcEEEEEEeCC-CCcEEEEEEec
Confidence 557999999999999999987 367777776666554 4432 2 1 234444321122 222 678888
Q ss_pred CCChHHHHHHHHHH
Q 000065 208 GTTNSAIVSSLTKT 221 (2462)
Q Consensus 208 ~~~~~~ii~~i~~~ 221 (2462)
+.+-.+|-+.|.++
T Consensus 120 e~~A~~ls~aV~~A 133 (144)
T 2dyq_A 120 QPHAGGLSEAVQAA 133 (144)
T ss_dssp SSCTHHHHHHHHHH
T ss_pred CCchHHHHHHHHHH
Confidence 76666666666543
No 118
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=30.03 E-value=3.6e+02 Score=31.33 Aligned_cols=138 Identities=13% Similarity=0.117 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHhcH---HhhH-hh-hcchhhhhh-HHhhhccCCcchHHHHHHHHHHHhcCCCCCCccccCchhhhh
Q 000065 497 ATVMGFVACLRRLLTSR---TAAS-HV-MSFPAAVGR-IMGLLRNGSEGVAAEAAGLIAILIGGGSGDTNMLTDSKGEQH 570 (2462)
Q Consensus 497 ~~~~~~~~aLrRL~as~---~gf~-~~-~~~p~~~~~-v~~~L~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~d~~~e~~ 570 (2462)
.-+...+++|.-++..- .+.. .+ ..+...+.. |-++|..+...+...|++.+..++......
T Consensus 70 ~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~------------ 137 (278)
T 4ffb_C 70 VAQEQAIVALNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSI------------ 137 (278)
T ss_dssp HHHHHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSS------------
T ss_pred HHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcH------------
Confidence 34455677777766421 1111 11 112223333 335677788889999999998888521111
Q ss_pred hhhcccchhcccchhhHHHHHHhhcCCCChhHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHHHhhhhHHHHhhCCCc
Q 000065 571 ATMMHTKSVLFSQQGYLIVLVNRLRPMSVSPLLSMAVVEVLETMICEPHSETTQYTVFVELLRQVAGLRRRLFALFGHPA 650 (2462)
Q Consensus 571 ~~~~~nKs~ll~~~~~~~~L~~~l~~~~~~alv~~a~l~~l~~~lC~P~seTT~~~~f~~ll~~va~~gr~lf~Lf~hp~ 650 (2462)
...++.++.-+... .|-|..+.+.++.-+|..=+..+-+...+ +...-..|.++|.|+.
T Consensus 138 -------------~~~~e~l~~~l~~K--npkv~~~~l~~l~~~l~~fg~~~~~~k~~------l~~i~~~l~k~l~d~~ 196 (278)
T 4ffb_C 138 -------------TQSVELVIPFFEKK--LPKLIAAAANCVYELMAAFGLTNVNVQTF------LPELLKHVPQLAGHGD 196 (278)
T ss_dssp -------------HHHHHHHGGGGGCS--CHHHHHHHHHHHHHHHHHHTTTTCCHHHH------HHHHGGGHHHHHTCSS
T ss_pred -------------HHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHhCCCcCCchhH------HHHHHHHHHHHHhCCc
Confidence 11223444444432 57889999999998886522222232221 2233456778999999
Q ss_pred hhHHhHHHHHHHHHHhh
Q 000065 651 ESVRETVAVIMRTIAEE 667 (2462)
Q Consensus 651 ~~i~~~aglimrai~Ee 667 (2462)
..|+++|.-++-++.--
T Consensus 197 ~~VR~aA~~l~~~ly~~ 213 (278)
T 4ffb_C 197 RNVRSQTMNLIVEIYKV 213 (278)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999887766543
No 119
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=28.95 E-value=41 Score=40.42 Aligned_cols=70 Identities=13% Similarity=0.118 Sum_probs=49.0
Q ss_pred EEEEEeecccccccEEEEEecCeeeeeCCCCcccccccccccccccccccccCCCCCCcEEEEEeecCCC-cccceeeeh
Q 000065 24 RYLVVKHSWRGRYKRILCISNATIITLDPNTLAVTNSYEVASDFEGATPIIGRDDNANEFNISVRTDGRG-KFKAFKFSS 102 (2462)
Q Consensus 24 ~y~vtKhSWrgkYkRIf~Ig~~~i~T~nP~tl~vTN~W~y~~d~~~i~p~~~~~~~~~eF~i~~rk~~~~-K~~~mkFss 102 (2462)
.|+..|-+ .| =+-++.|+..||.-|++++- .|.|+| ++|..++.. .+.|+|.++.++++ +..++.|.+
T Consensus 207 ~~f~vk~~-~~-~~~~LgV~~~Gi~v~~~~~k--l~~f~w-~~I~~~s~~------~k~F~i~~~~~~~~~~~~~~~f~~ 275 (296)
T 3qij_A 207 DLHKAKDL-EG-VDIILGVCSSGLLVYKDKLR--INRFPW-PKVLKISYK------RSSFFIKIRPGEQEQYESTIGFKL 275 (296)
T ss_dssp EEEEEECT-TS-CEEEEEECSSEEEEEETTEE--EEEEEG-GGEEEEEEE------TTEEEEEEC-------CEEEEEEC
T ss_pred eEEEEEcC-CC-CEEEEEECCCeEEEEeCCCe--EEEEEh-hhcCEEEec------CCEEEEEEecCccCCccceEEEEC
Confidence 45555644 23 36789999999999999873 689999 799888762 35899999875432 346788876
Q ss_pred hh
Q 000065 103 RF 104 (2462)
Q Consensus 103 ~~ 104 (2462)
+.
T Consensus 276 ~~ 277 (296)
T 3qij_A 276 PS 277 (296)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 120
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=28.63 E-value=9.3e+02 Score=31.97 Aligned_cols=57 Identities=11% Similarity=0.064 Sum_probs=34.7
Q ss_pred hHhhhhHHHHHHHhhCChhHHHHhhhccCCCCcchHHHHHHhccCCcch--hHHHHHHHHHhc
Q 000065 2388 ERVRLSCLRVLHQLAASTTCAEAMAATSTGTPQVVPILMKAIGWQGGSI--LALETLKRVVVA 2448 (2462)
Q Consensus 2388 ~~~~~s~l~vLh~Ls~s~~Cv~ala~~~~~~~~~v~~l~~a~~~~~~~~--~a~etl~r~~~~ 2448 (2462)
..+|..++..|..++.+.. .+.+.. .-+.++|.|.+.++.....+ -|+.+|.++...
T Consensus 383 ~~~r~~a~~~l~~i~~~~~-~~~~~~---~l~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~ 441 (861)
T 2bpt_A 383 WRNREAAVMAFGSIMDGPD-KVQRTY---YVHQALPSILNLMNDQSLQVKETTAWCIGRIADS 441 (861)
T ss_dssp HHHHHHHHHHHHHTSSSSC-HHHHHH---HHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCC-HHHHHH---HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 3688899999999986521 122210 01246888888887643333 667777766643
No 121
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=28.32 E-value=2.2e+02 Score=35.64 Aligned_cols=136 Identities=13% Similarity=0.223 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHhcHHhhHhhhcchhhhhhHHhhhccCCcchHHHHHHHHHHHhcCCCCCCccccCchhhhhhhhcccc
Q 000065 498 TVMGFVACLRRLLTSRTAASHVMSFPAAVGRIMGLLRNGSEGVAAEAAGLIAILIGGGSGDTNMLTDSKGEQHATMMHTK 577 (2462)
Q Consensus 498 ~~~~~~~aLrRL~as~~gf~~~~~~p~~~~~v~~~L~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~d~~~e~~~~~~~nK 577 (2462)
..-..+.|||=|+-++.|+..+..-|..+..+..+|...+..+...|+++|.++.- .++... +++.--..+-+.
T Consensus 74 ~~~~~l~CLkalmN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~alc~-~~~~~G-----~~~~VL~Al~~~ 147 (386)
T 2bnx_A 74 NQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCI-LPQPED-----MNERVLEAMTER 147 (386)
T ss_dssp HHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHT-CCSSTT-----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHc-CCCCCC-----hHHHHHHHHHHH
Confidence 34457899999999999999999999999999999998888899999999988653 222100 122222222233
Q ss_pred hhcccchhhHHHHHHhhcCCCChhHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHHH--hhhhHHHHh
Q 000065 578 SVLFSQQGYLIVLVNRLRPMSVSPLLSMAVVEVLETMICEPHSETTQYTVFVELLRQVA--GLRRRLFAL 645 (2462)
Q Consensus 578 s~ll~~~~~~~~L~~~l~~~~~~alv~~a~l~~l~~~lC~P~seTT~~~~f~~ll~~va--~~gr~lf~L 645 (2462)
.. ++....+..|++.++..+.- =...+.+.|+-..+..| .|-.....+-.+.- ++-+-|=+|
T Consensus 148 ~~-~~e~~RF~~lv~~l~~~~~~-e~~~a~m~lIN~lv~~~----~dl~~R~~LR~Ef~~~GL~~il~~L 211 (386)
T 2bnx_A 148 AE-MDEVERFQPLLDGLKSGTSI-ALKVGCLQLINALITPA----EELDFRVHIRSELMRLGLHQVLQEL 211 (386)
T ss_dssp HH-HHTSCTTHHHHHHTSTTSCH-HHHHHHHHHHHHHHTTC----SCHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred HH-hCchhhHHHHHHHHHcCChH-HHHHHHHHHHHHHHCCC----CCHHHHHHHHHHHHHCChHHHHHHH
Confidence 33 36667788899988864332 34456667777777554 36666666666663 343443344
No 122
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=27.03 E-value=4.8e+02 Score=28.20 Aligned_cols=15 Identities=33% Similarity=0.308 Sum_probs=8.4
Q ss_pred cHHHHHHHHHHHHHH
Q 000065 2153 PLQQRAAAASLLGKL 2167 (2462)
Q Consensus 2153 ~~~~R~~aA~lL~km 2167 (2462)
++.+|..++..|+++
T Consensus 89 ~~~vr~~a~~aL~~~ 103 (201)
T 3ltj_A 89 DGWVRQSAAVALGQI 103 (201)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 355555555555554
No 123
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=27.01 E-value=1.2e+02 Score=36.22 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=71.2
Q ss_pred CCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHHhh-CcchHHHHHHHHHHhhcchHHHHHHHHcCCH---hhh
Q 000065 2066 PDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQMLHY-APACREGVLHVLYALASTPELAWAAAKHGGV---VYI 2141 (2462)
Q Consensus 2066 ~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL~~-~p~~~~~~L~~L~aL~s~t~lvkqal~~Ggv---lyL 2141 (2462)
+...+...+.++++.+. .++.-..++.+++..+.+ +.-.+..+|+.+-.+.....+. ...++ ..+
T Consensus 144 ~k~~vR~~~r~il~~l~-------~v~~~~~v~~~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~----~~~~l~~~~~i 212 (266)
T 2of3_A 144 AKDNMRTSVRDIVNVLS-------DVVGPLKMTPMLLDALKSKNARQRSECLLVIEYYITNAGIS----PLKSLSVEKTV 212 (266)
T ss_dssp SSHHHHHHHHHHHHHHH-------HHHCHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHCSG----GGGGGCHHHHH
T ss_pred ChHHHHHHHHHHHHHHH-------HHCCHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCCC----ccccccchHHH
Confidence 34568888888887765 233334467777776653 4445667888877776432222 12233 444
Q ss_pred HHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHHhhCcHHHHHHH
Q 000065 2142 LELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLARFLPDGLVSVI 2193 (2462)
Q Consensus 2142 L~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~KfLP~~fvdam 2193 (2462)
..+|.+ .+..+|..|...+..+-.. .|.+|...+.+ ||+.-.+.+
T Consensus 213 a~ll~D----~d~~VR~aAl~~lve~y~~--~Gd~v~k~lg~-L~~~~~~~l 257 (266)
T 2of3_A 213 APFVGD----KDVNVRNAAINVLVACFKF--EGDQMWKAAGR-MADKDKSLV 257 (266)
T ss_dssp GGGGGC----SSHHHHHHHHHHHHHHHHH--HTTHHHHHHCC-CCHHHHHHH
T ss_pred HHHHcC----CCHHHHHHHHHHHHHHHHH--hhHHHHHHHhc-CCHHHHHHH
Confidence 445543 4789999999999888765 79999988877 677554443
No 124
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=26.49 E-value=72 Score=37.03 Aligned_cols=91 Identities=12% Similarity=0.128 Sum_probs=65.3
Q ss_pred hhhHHHhcCHHHHHHHHHHhhhcccCCCCCCCccceeehhhhhhhhhhccChHHHHHHHhhcchHHHHHHhhccccchhH
Q 000065 1662 GEELVRDGGIQLLSTLLSRCMCVVQKTTPAMEPSAVIVTNVMRTFSVLSQFESARTEVLQFSGLVQDIVHCTELELVPGA 1741 (2462)
Q Consensus 1662 aeeL~re~G~~~L~~~l~rC~~vl~~~s~~~~~~~~v~~~~~r~~~v~a~F~~cr~~i~~~~~l~~di~~~l~l~~~~~l 1741 (2462)
.+++ -.+|+..|...+.++...-...+ .+.....-..|++|+...-....+++.+...+..+.-|+.++. ...+.+
T Consensus 37 v~~F-~~~Gl~~L~~~L~~~~~~~~~~~--~~~~~~~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~-s~~~~~ 112 (233)
T 2f31_A 37 VQTF-GAEGLASLLDILKRLHDEKEETS--GNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMD-PAVPNM 112 (233)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHTCC-------CCHHHHHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCC-TTSHHH
T ss_pred HHHH-HHhHHHHHHHHHHHHHhcccccc--hhhhHHHHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhC-CCCchH
Confidence 3445 35799999999998854221110 1223445568899999999999999999999999988888875 444577
Q ss_pred HHHHHHHHHHhhCCH
Q 000065 1742 VDAALQTIAHVSVSS 1756 (2462)
Q Consensus 1742 ~~aALe~v~~~a~~~ 1756 (2462)
...++|.+..+|.-+
T Consensus 113 r~~~leLL~~lc~~~ 127 (233)
T 2f31_A 113 MIDAAKLLSALCILP 127 (233)
T ss_dssp HHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHhCC
Confidence 778899888776543
No 125
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=25.21 E-value=46 Score=43.46 Aligned_cols=66 Identities=12% Similarity=0.133 Sum_probs=50.2
Q ss_pred cEEEEEecCeeeeeCCCCcccccccccccccccccccccCCCCCCcEEEEEeecCCCcccceeeehhhhhHHHHHHHHh
Q 000065 37 KRILCISNATIITLDPNTLAVTNSYEVASDFEGATPIIGRDDNANEFNISVRTDGRGKFKAFKFSSRFRASILTELHRI 115 (2462)
Q Consensus 37 kRIf~Ig~~~i~T~nP~tl~vTN~W~y~~d~~~i~p~~~~~~~~~eF~i~~rk~~~~K~~~mkFss~~Ra~lLT~l~r~ 115 (2462)
.=++.|+..||.-|++.+-++.+.|+| ++|.++... ..+.|+|++. | | ++.|.|. .++-+++|...
T Consensus 467 ~l~LgV~~~GI~v~~~~~k~~l~~~~~-~~I~~~~~~-----~~~~f~i~~~--~--~--~l~f~T~-qa~~i~~LI~~ 532 (555)
T 3au4_A 467 ELWLGVSADAVSVYKRGEGRPLEVFQY-EHILSFGAP-----LANTYKIVVD--E--R--ELLFETS-EVVDVAKLMKA 532 (555)
T ss_dssp EEEEEECSSEEEEEETTCSSCSEEEEG-GGEEEEEEE-----ETTEEEEEET--T--E--EEEEECT-THHHHHHHHHH
T ss_pred eEEEEEcccceEEECCCCCeeEEEEEh-hheeeecCC-----CCCEEEEEEC--C--c--EEEEECC-CHHHHHHHHHH
Confidence 456899999999999999999999999 798877620 1357988765 3 3 4999984 46666666653
No 126
>3peg_A Neurofibromin; SEC14 domain, pleckstrin homology domain, PH domain, phosphatidylethanolamin binding, lipid binding, lipid bindi protein; HET: PEV; 2.52A {Homo sapiens}
Probab=25.11 E-value=35 Score=41.24 Aligned_cols=79 Identities=14% Similarity=0.273 Sum_probs=49.3
Q ss_pred EEeecccccccEEEEEecCeeeeeC-------CCCcccccccccccccccccccccCCCCCCcEEEEEeecCCCccccee
Q 000065 27 VVKHSWRGRYKRILCISNATIITLD-------PNTLAVTNSYEVASDFEGATPIIGRDDNANEFNISVRTDGRGKFKAFK 99 (2462)
Q Consensus 27 vtKhSWrgkYkRIf~Ig~~~i~T~n-------P~tl~vTN~W~y~~d~~~i~p~~~~~~~~~eF~i~~rk~~~~K~~~mk 99 (2462)
++|-|= -+-|=.+-||+..+.-.- +.+..+++=+.. +||+.+... .++||+|.+..+ + .+|.
T Consensus 196 ~~~l~~-~~~~V~lkIG~~~lQi~~~~k~~i~~~~~~~nDVy~l-sdI~ev~~~-----~~~eFti~~~n~---~-~~l~ 264 (290)
T 3peg_A 196 ALKLAH-KDTKVSIKVGSTAVQVTSAERTKVLGQSVFLNDIYYA-SEIEEICLV-----DENQFTLTIANQ---G-TPLT 264 (290)
T ss_dssp EEECSS-SCEEEEEEECSSEEEEEESSCEEETTEEECCEEEEET-TTEEEEEEE-----ETTEEEEEETTC---S-SCEE
T ss_pred ceeecc-cCCCEEEEECCCEEEEEEeccEEccccCceeEEEEEe-eeeeEEEec-----CCCceEEEEeCC---c-EEEE
Confidence 555432 222456667776543222 112344555665 788776652 468999998532 2 5799
Q ss_pred eehhhhhHHHHHHHHhh
Q 000065 100 FSSRFRASILTELHRIR 116 (2462)
Q Consensus 100 Fss~~Ra~lLT~l~r~r 116 (2462)
|+|..|.+|+--+.--+
T Consensus 265 f~S~~~~eIv~~i~~a~ 281 (290)
T 3peg_A 265 FMHQECEAIVQSIIHIR 281 (290)
T ss_dssp EECTTHHHHHHHHHHHH
T ss_pred EeCcCHHHHHHHHHHHH
Confidence 99999999998876543
No 127
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=24.94 E-value=5.5e+02 Score=27.95 Aligned_cols=142 Identities=14% Similarity=0.114 Sum_probs=0.0
Q ss_pred hhhhhcccCCCCCCCCChhhHHHHHHHHhcCChhHHHHHHhhcchHHHHHHHHhh-CcchHHHHHHHHHHhhcchHHHHH
Q 000065 2053 LLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLLLLQMLHY-APACREGVLHVLYALASTPELAWA 2131 (2462)
Q Consensus 2053 L~~Lf~~L~~~~~~~~~vq~~aL~VL~~ls~n~~CVeaiA~~~~vl~~Ll~lL~~-~p~~~~~~L~~L~aL~s~t~lvkq 2131 (2462)
+..|...|... +..++..++..|..+.. ...+..|+.++.. .+..+..++..|..+..
T Consensus 21 ~~~L~~~L~~~---~~~vR~~A~~~L~~~~~-----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~------- 79 (211)
T 3ltm_A 21 VEMYIKNLQDD---SYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD------- 79 (211)
T ss_dssp HHHHHHHTTCS---SHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHcCC---CHHHHHHHHHHHHHhCC-----------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC-------
Q ss_pred HHHcCCHhhhHHhhcCCCCCCcHHHHHHHHHHHHHHhcCCCCChHHHHHHHhhCcH-------HHHHHHhcCchhhHHHh
Q 000065 2132 AAKHGGVVYILELLLPSQQETPLQQRAAAASLLGKLVGQPMHGPRVAITLARFLPD-------GLVSVIRDGPGEAVVSA 2204 (2462)
Q Consensus 2132 al~~GgvlyLL~LL~~~~e~~~~~~R~~aA~lL~km~aD~lhGPrV~~~L~KfLP~-------~fvdamrdsp~~a~v~~ 2204 (2462)
.+.+..|+.+|.+. ++.+|..++..|+++ ..|.....|.++|-. .-+.++..-+...++..
T Consensus 80 ---~~~~~~L~~~l~~~----~~~vr~~a~~aL~~~-----~~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~ 147 (211)
T 3ltm_A 80 ---ERAVEPLIKALKDE----DGWVRQSAAVALGQI-----GDERAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEP 147 (211)
T ss_dssp ---GGGHHHHHHHTTCS----SHHHHHHHHHHHHHH-----CCGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHH
T ss_pred ---HHHHHHHHHHHcCC----CHHHHHHHHHHHHHh-----CcHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHH
Q ss_pred hcccCcCcccccCHHHHHHHHHHHHHH
Q 000065 2205 LEQTTETPELVWTPAMAASLSAQISTM 2231 (2462)
Q Consensus 2205 fes~~EnPELIWn~~mR~~v~~~i~~~ 2231 (2462)
|..--..| +...|......+..+
T Consensus 148 L~~~l~d~----~~~vr~~a~~aL~~~ 170 (211)
T 3ltm_A 148 LIKALKDE----DGWVRQSAADALGEI 170 (211)
T ss_dssp HHHHTTCS----SHHHHHHHHHHHHHH
T ss_pred HHHHHcCC----CHHHHHHHHHHHHHh
No 128
>1xr0_B FGFR signalling adaptor SNT-1; phosphotyrosine binding domain, PTB, TRK, NPXPY motif,, signaling protein/growth factor receptor complex; NMR {Homo sapiens} SCOP: b.55.1.2
Probab=23.81 E-value=1.6e+02 Score=31.72 Aligned_cols=76 Identities=11% Similarity=0.046 Sum_probs=51.6
Q ss_pred ccceEEEEeeceEEEecCCCCceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccCCCcc----ccccCCCCChHH
Q 000065 138 WVPYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYGRKSK----AFQAAPGTTNSA 213 (2462)
Q Consensus 138 w~p~~L~Vt~~~leq~d~~~g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g~~~r----~~l~~~~~~~~~ 213 (2462)
--++.|+||...|...++ +.....++|+.+...+. | .+.|.+. -|+.+- +|.|.+. +-++
T Consensus 26 ~g~~~L~lt~~~L~L~~~--~~~~~~Wp~~~LRrYG~----d-------~~~FsFE--aGRRC~tGeGiF~F~t~-~~~~ 89 (129)
T 1xr0_B 26 LGSGIMELTDTELILYTR--KRDSVKWHYLCLRRYGY----D-------SNLFSFE--SGRRCQTGQGIFAFKCA-RAEE 89 (129)
T ss_dssp CCCEEEEECSSCEEEEET--TTEEEEECSTTEEEEEE----C-------SSEEEEE--ECSCSTTCSEEEEEECS-CHHH
T ss_pred ceeEEEEEecCEEEEEeC--CCCeeEcchHHhhhcCc----c-------CCEEEEE--cCCCCCCCCcEEEEEcC-CHHH
Confidence 358999999999999875 55667889999985443 3 3677663 444333 7888874 7777
Q ss_pred HHHHHHHHHhhhcCeEE
Q 000065 214 IVSSLTKTAKSMVGLSL 230 (2462)
Q Consensus 214 ii~~i~~~A~~~~G~~i 230 (2462)
|.+.+... .+...+++
T Consensus 90 If~~l~~~-i~~~s~s~ 105 (129)
T 1xr0_B 90 LFNMLQEI-MQNNSINV 105 (129)
T ss_dssp HHHHHHHH-HHHTTCCC
T ss_pred HHHHHHHH-HhccCccc
Confidence 77777654 44233333
No 129
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=23.33 E-value=96 Score=34.07 Aligned_cols=75 Identities=13% Similarity=0.057 Sum_probs=48.8
Q ss_pred cccceEEEEeeceEEEecCCCCceEEEeeccCCCccceeeeccccCCCCCCCcEEEeeccC-------CCccccccCCCC
Q 000065 137 EWVPYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSPAIVLLSDAYGKRSETGGFVLCPLYG-------RKSKAFQAAPGT 209 (2462)
Q Consensus 137 ~w~p~~L~Vt~~~leq~d~~~g~~~~~y~y~d~~~~~i~~l~d~~~~~~~~~gfvl~~~~g-------~~~r~~l~~~~~ 209 (2462)
++..|.|.|+..||..+|+.++.++..|+-++|. +. ++.+ .+..-|+..--.. ....-|+|.|..
T Consensus 55 ~~~~v~L~VS~~gi~l~d~~tk~~~~~~~i~~IS---fc--a~d~---~~~r~FafIar~~~~~~~~~~~~~CHVF~~~~ 126 (160)
T 2ej8_A 55 RMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVV---LY--ATHQ---ENKRLFGFVLRTSSGRSESNLSSVCYIFESNN 126 (160)
T ss_dssp CCCEEEEEEESSEEEEECTTTCCEEEEEEGGGEE---EE--EEET---TEEEEEEEEEEECC------CEEEEEEEEESS
T ss_pred cCCEEEEEEECCeEEEEeCCCCeEEEEeeCCeEE---EE--EecC---CCCeEEEEEEecCCcccCCCccEEEEEEEcch
Confidence 5678999999999999999999999999999886 43 2321 0123444321111 112358888764
Q ss_pred ChHHHHHHHH
Q 000065 210 TNSAIVSSLT 219 (2462)
Q Consensus 210 ~~~~ii~~i~ 219 (2462)
.-.+|+..|-
T Consensus 127 ~A~~I~~tig 136 (160)
T 2ej8_A 127 EGEKICDSVG 136 (160)
T ss_dssp CHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 4555666553
No 130
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=22.66 E-value=1.3e+02 Score=36.52 Aligned_cols=91 Identities=13% Similarity=0.270 Sum_probs=63.7
Q ss_pred CCccEEEEEEEeec------------ccccccEEEEEecCe-----eee----e-CCCCccccccccccccccccccccc
Q 000065 18 ETEYLARYLVVKHS------------WRGRYKRILCISNAT-----IIT----L-DPNTLAVTNSYEVASDFEGATPIIG 75 (2462)
Q Consensus 18 ~~~~~a~y~vtKhS------------WrgkYkRIf~Ig~~~-----i~T----~-nP~tl~vTN~W~y~~d~~~i~p~~~ 75 (2462)
++.||+--=|+|-| =+.|.+||+||.... |.- . +-.++.+--+|+. .|+..|.-.+
T Consensus 105 ~ErYITHVrV~Eds~~ps~pPp~~s~~kkKK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKTW~L-~ELk~Id~~~- 182 (320)
T 3a58_A 105 PNNYITHVRIIEDSKFPSSRPPPDSKLENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQL-TELVRVEKDL- 182 (320)
T ss_dssp CCEEEEEEEEEEESSSTTSCCCTTCCGGGEEEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEEEEG-GGCCEEEECS-
T ss_pred cceEEEEEEEEecccCCCCCCCcccCccccCceEEEEEEecCCCceEEEEEEEecCCCceEecceech-hhhhhhhccc-
Confidence 56888888888832 367889999998665 322 2 3356899999999 7998877311
Q ss_pred CCCCCCcEEEEEeecCCCcccceeeehhhhhHHHHHHHHhh
Q 000065 76 RDDNANEFNISVRTDGRGKFKAFKFSSRFRASILTELHRIR 116 (2462)
Q Consensus 76 ~~~~~~eF~i~~rk~~~~K~~~mkFss~~Ra~lLT~l~r~r 116 (2462)
..+.+|+|++.| ...=..-+...|.-.|..|.++.
T Consensus 183 --~~~~gF~LTl~K----~YyW~A~s~kER~~FI~sLvKiy 217 (320)
T 3a58_A 183 --EISEGFILTMSK----KYYWETNSAKERTVFIKSLITLY 217 (320)
T ss_dssp --SCTTEEEEESSS----EEEEEESSHHHHHHHHHHHHHHH
T ss_pred --CCCCceEEEeCC----ceEEecCCHHHHHHHHHHHHHHH
Confidence 123799999843 23333334588989999999875
No 131
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*
Probab=22.19 E-value=42 Score=39.80 Aligned_cols=50 Identities=18% Similarity=0.353 Sum_probs=36.0
Q ss_pred cccccccccccccccccccCCCCCCcEEEEEeecCCCcccceeeehhhhhHHHHHHHHhh
Q 000065 57 VTNSYEVASDFEGATPIIGRDDNANEFNISVRTDGRGKFKAFKFSSRFRASILTELHRIR 116 (2462)
Q Consensus 57 vTN~W~y~~d~~~i~p~~~~~~~~~eF~i~~rk~~~~K~~~mkFss~~Ra~lLT~l~r~r 116 (2462)
.++=+.. +|++.|.- +.++||+|++..+ + .+|.|+|..|.+|+--+.--+
T Consensus 198 ~ndVy~l-s~i~~v~t-----~~~~eFtl~~~n~---~-~~l~f~S~~~~eIv~~i~~a~ 247 (256)
T 3pg7_A 198 LNDIYYA-SEIEEICL-----VDENQFTLTIANQ---G-TPLTFMHQECEAIVQSIIHIR 247 (256)
T ss_dssp CEEEEEG-GGEEEEEE-----EETTEEEEEETTC---C-SCEEEECTTHHHHHHHHHHHH
T ss_pred eEEEEEe-eeeEEEec-----CCCCCeEEEEeCC---c-EEEEEeCcCHHHHHHHHHHHH
Confidence 4455655 78877632 3468999998543 2 569999999999998876543
No 132
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=21.30 E-value=2.9e+02 Score=29.91 Aligned_cols=26 Identities=27% Similarity=0.259 Sum_probs=14.9
Q ss_pred HhhhHHhhcCCCCCCcHHHHHHHHHHHHHH
Q 000065 2138 VVYILELLLPSQQETPLQQRAAAASLLGKL 2167 (2462)
Q Consensus 2138 vlyLL~LL~~~~e~~~~~~R~~aA~lL~km 2167 (2462)
+..|+.++.+ .++.+|..++..|+++
T Consensus 140 ~~~L~~~l~d----~~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 140 VEPLIKALKD----EDGWVRQSAADALGEI 165 (201)
T ss_dssp HHHHHHHTTC----SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC----CCHHHHHHHHHHHHHh
Confidence 3445555543 2456677777777666
No 133
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=21.12 E-value=70 Score=42.55 Aligned_cols=30 Identities=20% Similarity=0.178 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHH
Q 000065 1543 EKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYER 1577 (2462)
Q Consensus 1543 ~~IKkAYRkLa~k~HPDKnp~a~ekF~~I~~AYEv 1577 (2462)
.+|+++|||||+..++ .++++.-|..|+.|
T Consensus 646 ~~~~~ayr~la~~~~~-----~~~r~~lvd~a~~v 675 (681)
T 2pzi_A 646 LGVEASLRSLARVAPT-----QRHRYTLVDMANKV 675 (681)
T ss_dssp HHHHHHHHHHHHHCSS-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC-----hHHHHHHHHHhccc
Confidence 4599999999997655 47889999988875
Done!