Query 000067
Match_columns 2445
No_of_seqs 356 out of 1591
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 12:20:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000067.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000067hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bo5_A Histone-lysine N-methyl 100.0 1.2E-35 4E-40 340.9 17.1 250 1749-2043 15-287 (290)
2 3hna_A Histone-lysine N-methyl 100.0 3.9E-36 1.3E-40 344.5 12.5 248 1741-2039 25-287 (287)
3 3ope_A Probable histone-lysine 100.0 2.8E-35 9.6E-40 325.9 17.5 169 1849-2043 46-216 (222)
4 3ooi_A Histone-lysine N-methyl 100.0 1.4E-35 4.8E-40 330.6 14.7 164 1850-2040 66-231 (232)
5 3h6l_A Histone-lysine N-methyl 100.0 2.5E-35 8.4E-40 336.8 16.3 166 1850-2042 92-258 (278)
6 1ml9_A Histone H3 methyltransf 100.0 1.3E-35 4.6E-40 341.4 12.0 265 1752-2040 6-301 (302)
7 1mvh_A Cryptic LOCI regulator 100.0 4.6E-35 1.6E-39 337.2 15.3 250 1752-2041 24-298 (299)
8 2r3a_A Histone-lysine N-methyl 100.0 1E-33 3.6E-38 326.3 16.2 169 1849-2040 114-299 (300)
9 2w5y_A Histone-lysine N-methyl 100.0 2.2E-31 7.5E-36 290.6 14.1 163 1851-2040 29-191 (192)
10 3f9x_A Histone-lysine N-methyl 99.9 2.8E-27 9.6E-32 249.2 12.6 126 1880-2019 29-155 (166)
11 2f69_A Histone-lysine N-methyl 99.9 5.5E-23 1.9E-27 233.6 12.7 142 1849-2019 83-235 (261)
12 3s8p_A Histone-lysine N-methyl 99.9 8.1E-24 2.8E-28 241.8 3.9 130 1883-2039 138-267 (273)
13 1n3j_A A612L, histone H3 lysin 99.9 2.3E-22 7.7E-27 203.2 5.7 109 1881-2021 4-112 (119)
14 2qpw_A PR domain zinc finger p 99.8 2.3E-21 7.9E-26 204.9 10.0 109 1883-2019 31-146 (149)
15 1h3i_A Histone H3 lysine 4 spe 99.8 2.2E-21 7.4E-26 221.5 10.5 114 1883-2019 165-289 (293)
16 3rq4_A Histone-lysine N-methyl 99.8 2E-20 7E-25 211.6 5.8 125 1884-2038 111-235 (247)
17 3ep0_A PR domain zinc finger p 99.6 6.6E-15 2.3E-19 159.1 11.7 107 1889-2019 37-148 (170)
18 3db5_A PR domain zinc finger p 99.5 9.2E-15 3.1E-19 154.8 8.5 108 1889-2019 32-144 (151)
19 3dal_A PR domain zinc finger p 99.5 1E-14 3.6E-19 160.7 6.8 118 1889-2040 68-190 (196)
20 3ray_A PR domain-containing pr 99.3 9E-13 3.1E-17 148.7 6.1 122 1884-2038 75-201 (237)
21 3ihx_A PR domain zinc finger p 99.2 8.5E-12 2.9E-16 132.9 7.3 106 1890-2018 29-142 (152)
22 3n71_A Histone lysine methyltr 98.4 7.5E-08 2.6E-12 117.9 3.0 66 1971-2038 200-281 (490)
23 3qwp_A SET and MYND domain-con 98.4 2E-07 6.7E-12 112.2 5.8 65 1970-2038 200-269 (429)
24 3qww_A SET and MYND domain-con 98.3 4.5E-07 1.5E-11 109.6 5.0 45 1971-2019 201-245 (433)
25 2ast_B S-phase kinase-associat 97.1 0.00071 2.4E-08 76.0 8.2 106 1251-1362 5-129 (336)
26 2p1m_B Transport inhibitor res 97.0 0.0016 5.3E-08 78.6 9.5 127 1251-1382 2-166 (594)
27 3ogk_B Coronatine-insensitive 95.6 0.018 6.1E-07 69.6 8.1 34 1258-1292 16-49 (592)
28 3qxy_A N-lysine methyltransfer 95.5 0.0084 2.9E-07 73.3 4.7 44 1970-2017 221-264 (449)
29 2h21_A Ribulose-1,5 bisphospha 94.9 0.0086 2.9E-07 72.4 2.4 48 1970-2017 188-242 (440)
30 1fs1_A SKP2 F-BOX, cyclin A/CD 94.9 0.013 4.3E-07 51.8 2.8 40 1251-1292 5-44 (53)
31 1wh2_A Hypothetical protein AT 94.8 0.012 4.2E-07 57.5 2.7 49 1043-1091 17-65 (78)
32 3k3v_A Protein SMY2; GYF domai 94.2 0.018 6.2E-07 58.7 2.4 52 1044-1095 16-75 (100)
33 3smt_A Histone-lysine N-methyl 92.3 0.061 2.1E-06 66.9 3.4 45 1970-2017 271-315 (497)
34 2i7k_A Bromodomain-containing 83.8 1.6 5.5E-05 45.0 6.4 68 1474-1543 2-87 (117)
35 3k3v_A Protein SMY2; GYF domai 83.2 0.47 1.6E-05 48.6 2.2 49 640-688 15-71 (100)
36 1wh2_A Hypothetical protein AT 81.8 0.53 1.8E-05 46.2 1.9 46 637-682 14-59 (78)
37 3e4g_A ATP synthase subunit S, 81.5 1.1 3.6E-05 49.4 4.4 68 1298-1367 87-155 (176)
38 3dai_A ATPase family AAA domai 81.5 3 0.0001 43.4 7.5 85 1473-1565 3-105 (130)
39 3e4g_A ATP synthase subunit S, 78.7 0.92 3.1E-05 49.9 2.7 64 1298-1366 63-129 (176)
40 3d7c_A General control of amin 78.2 4.1 0.00014 41.3 7.1 74 1480-1565 7-98 (112)
41 3rcw_A Bromodomain-containing 74.8 4.5 0.00015 42.3 6.5 66 1476-1543 9-92 (135)
42 2d9e_A Peregrin; four-helix bu 74.8 4 0.00014 42.2 6.0 64 1478-1543 5-86 (121)
43 3aad_A Transcription initiatio 73.6 3.2 0.00011 48.7 5.5 88 1454-1543 19-126 (292)
44 2ast_B S-phase kinase-associat 72.4 5.3 0.00018 45.0 6.8 37 1326-1362 169-206 (336)
45 3nxb_A CAT eye syndrome critic 71.6 6.1 0.00021 40.3 6.4 59 1483-1543 19-95 (116)
46 3v7d_B Cell division control p 71.5 1.3 4.4E-05 51.3 1.6 37 1254-1292 14-50 (464)
47 2ri7_A Nucleosome-remodeling f 69.9 6 0.0002 42.6 6.2 71 1483-1565 75-163 (174)
48 2oss_A HUNK1 protein, bromodom 69.4 7.1 0.00024 40.7 6.4 74 1480-1565 21-114 (127)
49 1e6i_A Transcriptional activat 68.4 7.9 0.00027 40.0 6.4 71 1483-1565 16-104 (121)
50 1p22_A F-BOX/WD-repeat protein 68.0 1.9 6.4E-05 50.1 2.0 30 1261-1292 21-50 (435)
51 3hme_A Bromodomain-containing 67.4 7.4 0.00025 40.3 6.0 75 1479-1565 12-104 (123)
52 3ljw_A Protein polybromo-1; al 64.9 12 0.00041 38.5 6.9 67 1475-1543 3-93 (120)
53 3l2o_B F-box only protein 4; s 63.2 2.6 8.7E-05 50.4 1.9 38 1253-1292 3-40 (312)
54 1syx_B CD2BP2, CD2 antigen cyt 62.9 4.5 0.00015 40.7 3.2 48 1045-1093 27-80 (86)
55 2e31_A FBS1, F-box only protei 61.7 3.9 0.00013 48.4 3.1 39 1252-1292 48-87 (297)
56 2dkw_A Hypothetical protein KI 60.9 20 0.0007 37.7 7.9 68 1475-1544 7-87 (131)
57 3fkm_X Signaling protein; brom 58.2 13 0.00044 40.5 6.1 74 1480-1565 21-114 (166)
58 4alg_A Bromodomain-containing 57.7 14 0.00047 39.8 6.2 74 1480-1565 32-125 (154)
59 2dat_A Possible global transcr 57.4 21 0.00073 36.8 7.3 47 1506-1564 63-109 (123)
60 3ogk_B Coronatine-insensitive 56.7 18 0.0006 44.0 7.6 76 1298-1379 465-547 (592)
61 3mb3_A PH-interacting protein; 52.4 23 0.00078 37.0 6.6 60 1480-1541 21-98 (135)
62 2ovr_B FBW7, F-BOX/WD repeat p 51.2 6 0.00021 45.9 2.3 36 1254-1291 18-53 (445)
63 3p1f_A CREB-binding protein; s 51.2 24 0.00083 36.1 6.4 61 1481-1543 12-93 (119)
64 2grc_A Probable global transcr 51.1 29 0.00098 36.2 7.1 36 1506-1543 62-97 (129)
65 3g0l_A Hwalp4, bromodomain adj 50.4 22 0.00076 36.2 6.0 59 1483-1543 16-92 (117)
66 3jvl_A Bromodomain-containing 48.0 14 0.0005 37.7 4.2 48 1505-1564 57-104 (120)
67 3mqm_A Probable histone-lysine 47.0 30 0.001 35.8 6.4 37 1505-1543 58-94 (126)
68 2ouo_A HUNK1 protein, bromodom 46.2 16 0.00054 38.3 4.2 36 1506-1543 71-106 (130)
69 3q2e_A Bromodomain and WD repe 45.0 35 0.0012 35.2 6.6 56 1483-1540 13-86 (123)
70 3iu5_A Protein polybromo-1; PB 40.7 21 0.00072 36.4 4.1 37 1505-1543 54-90 (116)
71 2p1m_B Transport inhibitor res 40.3 37 0.0013 41.1 6.8 76 1298-1380 434-514 (594)
72 3k2j_A Protein polybromo-1; PB 37.7 26 0.00091 36.7 4.4 36 1505-1542 66-101 (130)
73 3mb4_A Protein polybromo-1; PB 37.1 26 0.00087 36.3 4.1 37 1505-1543 64-100 (124)
74 2yyn_A Transcription intermedi 33.7 59 0.002 34.2 6.2 70 1484-1565 24-112 (135)
75 3tlp_A Protein polybromo-1; PB 33.4 34 0.0011 36.4 4.4 37 1505-1543 74-110 (150)
76 3uv5_A Transcription initiatio 31.9 59 0.002 37.5 6.4 63 1480-1544 14-94 (265)
77 3q0b_X Histone-lysine N-methyl 31.4 6.2 0.00021 43.5 -1.6 24 1695-1718 125-153 (167)
78 3uv4_A Second bromodomain of h 29.3 37 0.0013 36.8 3.9 37 1505-1543 73-109 (158)
79 1a9n_A U2A', U2A'; complex (nu 26.0 21 0.0007 37.2 1.2 86 1311-1400 5-93 (176)
80 4fcg_A Uncharacterized protein 24.7 34 0.0012 39.4 2.8 74 1325-1401 127-212 (328)
81 3o36_A Transcription intermedi 24.2 81 0.0028 34.4 5.4 55 1486-1542 87-160 (184)
82 3oln_A E3 ubiquitin-protein li 21.9 11 0.00039 43.5 -1.8 24 1695-1718 165-194 (231)
83 3fde_A E3 ubiquitin-protein li 20.7 13 0.00043 42.6 -1.7 55 1695-1757 141-204 (212)
84 3out_A Glutamate racemase; str 20.4 67 0.0023 37.3 4.0 64 1281-1357 143-206 (268)
85 3qww_A SET and MYND domain-con 20.2 50 0.0017 40.5 3.1 28 1882-1911 8-35 (433)
86 1z7x_W Ribonuclease inhibitor; 20.0 1.5E+02 0.0052 34.8 7.0 65 1298-1366 343-412 (461)
No 1
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=340.90 Aligned_cols=250 Identities=18% Similarity=0.191 Sum_probs=172.3
Q ss_pred chh--hhhhhcc-ccCCCccccCCcccccccccccccCCc----ceeeeecCcCccccccccccCCCCcchhhhhhhhhH
Q 000067 1749 PED--YAEKLNA-QKNGSEELDMELPEVKDYKPRKQLGDQ----VFEQEVYGIDPYTHNLLLDSMPDELDWNLLEKHLFI 1821 (2445)
Q Consensus 1749 pd~--~~Ekl~~-~~ngtde~~~~~P~vK~YkprKvlG~D----V~Eqe~~GcDcyTrn~L~~~lP~el~Ws~~qKhkFI 1821 (2445)
+|. +.|.+|+ ++|.. ..|.-.+|.+..++|+. +.+....||+|....+....|+|- .++
T Consensus 15 ~Dis~G~E~~pi~~~n~~-----~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~~~C~~~~C~C~------~~~--- 80 (290)
T 3bo5_A 15 LDVACGQENLPVGAWPPG-----AAPAPFQYTPDHVVGPGADIDPTQITFPGCICVKTPCLPGTCSCL------RHG--- 80 (290)
T ss_dssp SCTTTTCSSSCCEEESTT-----CCCCCCEECSSCEECTTCSSCTTSCCCCCCCCCSSCCCTTTCGGG------TTS---
T ss_pred hhhhCCCCCCceeeECCC-----CCCCCcEEeeceecCCCCcCCcccccCCCCCCCCCCcCCCCCcch------hhc---
Confidence 454 8899999 77762 24556666666666552 344456899998655544444441 111
Q ss_pred HHHHHHHHhhhccccCCCCCCC----CCCCCCCccccc-CCcCccCCCchhhhcccccccccccCCCcceecCCccceEE
Q 000067 1822 EDVLLRTLNKQVRHFTGTGNTP----MMYPLQPVIEEI-EKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAYRKGLGVV 1896 (2445)
Q Consensus 1822 ek~LL~tLNkqVR~f~GcG~tP----~~c~ckPViECs-eC~CgeeC~NRllQ~C~~ilkai~r~PleVFrT~rKGwGVF 1896 (2445)
..+...++.. ......+++||. .|.|+..|.||++|.+.. .+++||.+..+|||||
T Consensus 81 ------------~~y~~~~~l~~~~~~~~~~~~~~EC~~~C~C~~~C~Nr~~q~g~~-------~~l~V~~s~~~G~Gl~ 141 (290)
T 3bo5_A 81 ------------ENYDDNSCLRDIGSGGKYAEPVFECNVLCRCSDHCRNRVVQKGLQ-------FHFQVFKTHKKGWGLR 141 (290)
T ss_dssp ------------CSBCTTSCBCC-----CCCCCEECCCTTCCSCTTCTTCCGGGCCC-------SCEEEEECSSSSEEEE
T ss_pred ------------CccCccccccccccccccCCceEeCCCCCCCCCCCCCeEcccCCc-------ccEEEEEcCCCcceEe
Confidence 0011111111 011124689995 688999999999986533 4789999999999999
Q ss_pred eCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCcccCCcccccC
Q 000067 1897 CNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRIC 1976 (2445)
Q Consensus 1897 AteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDATrkGNiARFIN 1976 (2445)
|+++ |++|+||+||+||||+..++.++.. .+. .....|.+.+..+.... ....++|||+.+||+|||||
T Consensus 142 A~~~--I~~G~~I~EY~Gevi~~~e~~~R~~------~~~--~~~~~Y~~~l~~~~~~~-~~~~~~IDa~~~GN~arfiN 210 (290)
T 3bo5_A 142 TLEF--IPKGRFVCEYAGEVLGFSEVQRRIH------LQT--KSDSNYIIAIREHVYNG-QVMETFVDPTYIGNIGRFLN 210 (290)
T ss_dssp ESSC--BCTTCEEEECCEEEECHHHHHHHHT------TCC--SSCCCCCEEEEECC------EEEEEEEEEEECGGGGCE
T ss_pred ECCc--cCCCCEEEEEeeEEeCHHHHHHHHH------hhc--ccCCcceeeecccccCC-ccceeEEeeeecCCchheee
Confidence 9987 9999999999999999766543321 111 12233544443321110 11237999999999999999
Q ss_pred CCCCCCeEEEEEEECC-EEEEEEEECCCCCCCCeEEEecCCCCCCc----------ccccCeeEEeCCCCcccccccC
Q 000067 1977 HSCRPNCEAKVTAVDG-HYQIGIYTVRGIHYGEEITFDYNSVTESK----------EEYEASVCLCGSQVCRGSYLNL 2043 (2445)
Q Consensus 1977 HSCdPNCetq~v~VdG-e~RIafFAlRDIkaGEELTFDYG~~~esk----------ee~~k~kClCGS~nCRGsyLg~ 2043 (2445)
|||+|||.++.|.+++ .++|+|||+|||++||||||||+..++.. .....+.|+|||++|||+ |+.
T Consensus 211 HSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~~~~~C~CGs~~CrG~-l~~ 287 (290)
T 3bo5_A 211 HSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDHGKLRKPCYCGAKSCTAF-LPF 287 (290)
T ss_dssp ECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEECSSCCCBCCCCCTTCCSB-CCC
T ss_pred ecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCccccccccccccccccCCCCccccCCCcCCCcc-CCC
Confidence 9999999999888887 58999999999999999999999876531 012357999999999995 443
No 2
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=100.00 E-value=3.9e-36 Score=344.50 Aligned_cols=248 Identities=18% Similarity=0.201 Sum_probs=174.7
Q ss_pred hhhcccccchh--hhhhhcc-ccCCCccccCCcccccccccccccCC----cceeeeecCcCccccccccccCCCCcchh
Q 000067 1741 RRKMRVSLPED--YAEKLNA-QKNGSEELDMELPEVKDYKPRKQLGD----QVFEQEVYGIDPYTHNLLLDSMPDELDWN 1813 (2445)
Q Consensus 1741 ~~km~v~lpd~--~~Ekl~~-~~ngtde~~~~~P~vK~YkprKvlG~----DV~Eqe~~GcDcyTrn~L~~~lP~el~Ws 1813 (2445)
+.+++|+++|. +.|.+|+ ++|.+| +-..|.-.+|-++.+++. +.......||+|.. .+....|+
T Consensus 25 ~~~~~~~~~Dis~G~E~~pi~~~N~vD--~~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~-~C~~~~C~------ 95 (287)
T 3hna_A 25 SPVERIVSRDIARGYERIPIPCVNAVD--SEPCPSNYKYVSQNCVTSPMNIDRNITHLQYCVCID-DCSSSNCM------ 95 (287)
T ss_dssp CCCCEEEESCTTTTCSSSCCCEEESSS--SCCCCCSSEECSSCEESSCCCCCCBGGGCCCCCCSS-SSCSTTCH------
T ss_pred cccCCEEhHhhCCCCCCCCEEEEeCCC--CCCCCCCcEEccccccCCCccccccCCCCCCCcCcC-CCCCCCCc------
Confidence 44577888886 9999999 999998 334466666666655444 23344567999975 23222222
Q ss_pred hhhhhhhHHHHHHHHHhhhccccCCCCCC-CCC--CCCCCccccc-CCcCccCCCchhhhcccccccccccCCCcceecC
Q 000067 1814 LLEKHLFIEDVLLRTLNKQVRHFTGTGNT-PMM--YPLQPVIEEI-EKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAY 1889 (2445)
Q Consensus 1814 ~~qKhkFIek~LL~tLNkqVR~f~GcG~t-P~~--c~ckPViECs-eC~CgeeC~NRllQ~C~~ilkai~r~PleVFrT~ 1889 (2445)
+.+.+ .. -.|.-.|.. +.. .....++||. .|.|+..|.||++|.+.. .++++|.+.
T Consensus 96 C~~~~------------~~-~~y~~~g~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~-------~~l~v~~t~ 155 (287)
T 3hna_A 96 CGQLS------------MR-CWYDKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLR-------ARLQLYRTR 155 (287)
T ss_dssp HHHHT------------SS-CCBCTTSCBCTTCCSSSCCCEECCCTTSSSCTTCSSCSGGGCCC-------SCEEEEECS
T ss_pred CcccC------------cc-cccCCCCcccccccccCCceEEecCCCCCCCCCCCCcccCcCCc-------ccEEEEEcC
Confidence 21111 00 001111111 111 1122378995 689999999999986543 478999999
Q ss_pred CccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCcccC
Q 000067 1890 RKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMHKA 1969 (2445)
Q Consensus 1890 rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDATrkG 1969 (2445)
.|||||||+++ |++|+||+||+|||++..++..+ ....|.+.+....+ ..++|||+.+|
T Consensus 156 ~kG~Gv~A~~~--I~~G~~I~eY~Gevi~~~e~~~r--------------~~~~Y~f~l~~~~~-----~~~~IDa~~~G 214 (287)
T 3hna_A 156 DMGWGVRSLQD--IPPGTFVCEYVGELISDSEADVR--------------EEDSYLFDLDNKDG-----EVYCIDARFYG 214 (287)
T ss_dssp SSSEEEEESSC--BCTTCEEEEECEEEEEHHHHHTC--------------SCCTTEEESCCSSS-----SCEEEEEEEEE
T ss_pred CCceEEEeCcc--cCCCCEEEEeeeEEccHHHHhhh--------------cccceEEEeccCCC-----ceEEEeccccC
Confidence 99999999987 99999999999999987554321 12345555543322 24899999999
Q ss_pred CcccccCCCCCCCeEEEEEEECC----EEEEEEEECCCCCCCCeEEEecCCCCCCcccccCeeEEeCCCCcccc
Q 000067 1970 NYASRICHSCRPNCEAKVTAVDG----HYQIGIYTVRGIHYGEEITFDYNSVTESKEEYEASVCLCGSQVCRGS 2039 (2445)
Q Consensus 1970 NiARFINHSCdPNCetq~v~VdG----e~RIafFAlRDIkaGEELTFDYG~~~eskee~~k~kClCGS~nCRGs 2039 (2445)
|+||||||||+|||.++.+++.+ .++|+|||+|||++||||||||+..++... ...+.|+|||++|||+
T Consensus 215 N~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~-~~~~~C~CGs~~CRgs 287 (287)
T 3hna_A 215 NVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIK-GKLFSCRCGSPKCRHS 287 (287)
T ss_dssp CGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHH-TTTCCCCCCCTTCSCC
T ss_pred CchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccC-CCcCEeeCCCCCCCCC
Confidence 99999999999999998766553 479999999999999999999997654322 2468999999999984
No 3
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=325.86 Aligned_cols=169 Identities=27% Similarity=0.487 Sum_probs=137.6
Q ss_pred CCccccc--CCcCccCCCchhhhcccccccccccCCCcceecCCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhh
Q 000067 1849 QPVIEEI--EKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQ 1926 (2445)
Q Consensus 1849 kPViECs--eC~CgeeC~NRllQ~C~~ilkai~r~PleVFrT~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERq 1926 (2445)
..++||. .|.|+..|.||++|.... ..++++|.++.|||||||+++ |++|+||+||+|||++..++.++.
T Consensus 46 ~~~~EC~~~~C~C~~~C~Nr~~q~~~~------~~~lev~~t~~kG~Gl~A~~~--I~~G~~I~ey~Gevi~~~e~~~r~ 117 (222)
T 3ope_A 46 MIFAECSPNTCPCGEQCCNQRIQRHEW------VQCLERFRAEEKGWGIRTKEP--LKAGQFIIEYLGEVVSEQEFRNRM 117 (222)
T ss_dssp GGTBCCCTTTCTTTTSCSSCTTTTTCC------CSCCEEEECTTSSEEEECSSC--BCTTCEEEECCSEEECHHHHHHHH
T ss_pred CeEeEeCCCCCcCCCCCCCceEeCCCc------cccEEEEEcCCCceEEEECce--ECCCCEEEEecceecCHHHHHHHH
Confidence 4468996 499999999999986422 235889999999999999987 999999999999999987654432
Q ss_pred hhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCcccCCcccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCC
Q 000067 1927 DGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHY 2006 (2445)
Q Consensus 1927 d~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDATrkGNiARFINHSCdPNCetq~v~VdGe~RIafFAlRDIka 2006 (2445)
. ..+ .....+|.+.+... ++|||+.+||+||||||||+|||.++.|.+++.++|+|||+|||++
T Consensus 118 ~-----~~~--~~~~~~y~~~l~~~---------~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~ 181 (222)
T 3ope_A 118 I-----EQY--HNHSDHYCLNLDSG---------MVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPA 181 (222)
T ss_dssp H-----HTS--TTCCSCCEEEEETT---------EEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCT
T ss_pred H-----HHh--cccCCeEEEecCCC---------EEEeCccccccceeeccCCCCCeEeEEEEECCeEEEEEEECCccCC
Confidence 1 111 12344566655421 7999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCcccccCeeEEeCCCCcccccccC
Q 000067 2007 GEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNL 2043 (2445)
Q Consensus 2007 GEELTFDYG~~~eskee~~k~kClCGS~nCRGsyLg~ 2043 (2445)
||||||||+...+... ..+.|+|||++|||+|.+.
T Consensus 182 GEELT~dY~~~~~~~~--~~~~C~CGs~~Crg~i~~~ 216 (222)
T 3ope_A 182 GTELTYDYNFHSFNVE--KQQLCKCGFEKCRGIIGGK 216 (222)
T ss_dssp TCBCEECTTSSBCCCS--CCCBCCCCCTTCCSBCC--
T ss_pred CCEEEEECCCcccCCc--CCCEeeCCCcCCCCccCCC
Confidence 9999999998876432 4589999999999976543
No 4
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=330.59 Aligned_cols=164 Identities=25% Similarity=0.482 Sum_probs=138.1
Q ss_pred Cccccc--CCcCccCCCchhhhcccccccccccCCCcceecCCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhh
Q 000067 1850 PVIEEI--EKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQD 1927 (2445)
Q Consensus 1850 PViECs--eC~CgeeC~NRllQ~C~~ilkai~r~PleVFrT~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd 1927 (2445)
.++||. .|.|+..|.||++|.... .++++|.+..+||||||+++ |++|+||+||+|||++..++.++..
T Consensus 66 ~~~EC~~~~C~c~~~C~Nr~~q~~~~-------~~lev~~t~~kG~Gl~A~~~--I~~G~~I~ey~Gevi~~~e~~~r~~ 136 (232)
T 3ooi_A 66 LLYECHPTVCPAGGRCQNQCFSKRQY-------PEVEIFRTLQRGWGLRTKTD--IKKGEFVNEYVGELIDEEECRARIR 136 (232)
T ss_dssp TTBCCCTTTCTTGGGCCCCHHHHTCC-------CCEEEEECSSSSEEEEESSC--BCTTCEEEECCEEEECHHHHHHHHH
T ss_pred ceeEeCCCCCCCCCCcCCccccCCCC-------ccEEEEEcCCceeEEEECce--ecCCceeeEeeeeccCHHHHHHHHH
Confidence 368996 489999999999986433 47899999999999999987 9999999999999999877655432
Q ss_pred hhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCcccCCcccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCCC
Q 000067 1928 GIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYG 2007 (2445)
Q Consensus 1928 ~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDATrkGNiARFINHSCdPNCetq~v~VdGe~RIafFAlRDIkaG 2007 (2445)
... . .....+|.+.+... ++|||+.+||+||||||||+|||.++.|.+++.++|+|||+|||++|
T Consensus 137 ~~~---~---~~~~~~y~~~l~~~---------~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~G 201 (232)
T 3ooi_A 137 YAQ---E---HDITNFYMLTLDKD---------RIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAG 201 (232)
T ss_dssp HHH---H---TTCCCCCEEEEETT---------EEEEEEEEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTT
T ss_pred HHh---h---cCCCceeeeecCcc---------eEEeccccccccccccccCCCCeEEEEEEECCceEEEEEECCccCCC
Confidence 211 1 12345676666421 79999999999999999999999999999999999999999999999
Q ss_pred CeEEEecCCCCCCcccccCeeEEeCCCCccccc
Q 000067 2008 EEITFDYNSVTESKEEYEASVCLCGSQVCRGSY 2040 (2445)
Q Consensus 2008 EELTFDYG~~~eskee~~k~kClCGS~nCRGsy 2040 (2445)
|||||||++.++.. ..+.|+|||++|||+|
T Consensus 202 EELT~dY~~~~~~~---~~~~C~CGs~~CrG~l 231 (232)
T 3ooi_A 202 TELTFNYNLECLGN---GKTVCKCGAPNCSGFL 231 (232)
T ss_dssp CBCEECCTTCSTTC---TTCBCCCCCTTCCSBC
T ss_pred CEEEEECCCCcCCC---CCcEeECCCCcCcCcC
Confidence 99999999987643 4689999999999954
No 5
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=100.00 E-value=2.5e-35 Score=336.83 Aligned_cols=166 Identities=29% Similarity=0.515 Sum_probs=139.4
Q ss_pred Cccccc-CCcCccCCCchhhhcccccccccccCCCcceecCCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhh
Q 000067 1850 PVIEEI-EKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDG 1928 (2445)
Q Consensus 1850 PViECs-eC~CgeeC~NRllQ~C~~ilkai~r~PleVFrT~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~ 1928 (2445)
.++||. .|.|+..|.||++|.... .++++|.+..+||||||+++ |++|+||+||+||||+..++.++...
T Consensus 92 ~~~EC~~~C~C~~~C~Nr~~q~g~~-------~~leV~~t~~kG~Gl~A~~~--I~~G~~I~EY~Gevi~~~e~~~R~~~ 162 (278)
T 3h6l_A 92 LMIECSSRCPNGDYCSNRRFQRKQH-------ADVEVILTEKKGWGLRAAKD--LPSNTFVLEYCGEVLDHKEFKARVKE 162 (278)
T ss_dssp GTBCCCTTCTTGGGCSSCTTTTTCC-------CCEEEEECSSSCEEEEESSC--BCTTCEEEECCCEEECHHHHHHHHHH
T ss_pred eEeccCCCCCcCCCCCCccccCCCc-------cCEEEEEcCCCceEEEeCCc--cCCCCEeEEeeeeecCHHHHHHHHHH
Confidence 368995 688999999999986533 47899999999999999997 99999999999999998776555433
Q ss_pred hHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCcccCCcccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCCCC
Q 000067 1929 IRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGE 2008 (2445)
Q Consensus 1929 iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDATrkGNiARFINHSCdPNCetq~v~VdGe~RIafFAlRDIkaGE 2008 (2445)
+. . .....+|++.+... ++|||+.+||+||||||||+|||.++.|.+++.++|+|||+|||++||
T Consensus 163 y~---~---~~~~~~y~~~l~~~---------~~IDa~~~GN~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GE 227 (278)
T 3h6l_A 163 YA---R---NKNIHYYFMALKND---------EIIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGS 227 (278)
T ss_dssp HH---H---TTCCCCCEEEEETT---------EEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTC
T ss_pred HH---h---ccCccceeecccCC---------eEEeCcccCChhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCC
Confidence 22 1 12345666665431 799999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCCCCcccccCeeEEeCCCCccccccc
Q 000067 2009 EITFDYNSVTESKEEYEASVCLCGSQVCRGSYLN 2042 (2445)
Q Consensus 2009 ELTFDYG~~~eskee~~k~kClCGS~nCRGsyLg 2042 (2445)
||||||++..+.. ..+.|+||+++|||++.+
T Consensus 228 ELT~dY~~~~~~~---~~~~C~CGs~~Crg~l~~ 258 (278)
T 3h6l_A 228 ELTFDYQFQRYGK---EAQKCFCGSANCRGYLGG 258 (278)
T ss_dssp BCEECCTTTEECS---SCEECCCCCTTCCSEECC
T ss_pred EEEEecCCCcCCC---CCcEeECCCCCCeeecCC
Confidence 9999999876532 468999999999996654
No 6
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=100.00 E-value=1.3e-35 Score=341.39 Aligned_cols=265 Identities=20% Similarity=0.260 Sum_probs=156.0
Q ss_pred hhhhhcc-ccCCCccccCCcccccccccccccCCccee---eeecCcCcccc-ccccccCCCCcchhhhhhhhhHHHH-H
Q 000067 1752 YAEKLNA-QKNGSEELDMELPEVKDYKPRKQLGDQVFE---QEVYGIDPYTH-NLLLDSMPDELDWNLLEKHLFIEDV-L 1825 (2445)
Q Consensus 1752 ~~Ekl~~-~~ngtde~~~~~P~vK~YkprKvlG~DV~E---qe~~GcDcyTr-n~L~~~lP~el~Ws~~qKhkFIek~-L 1825 (2445)
.+|++|+ ++|.+| +..+|.-..|.++.+++..|.. ....||+|... .|....|+|...+... ..+.. .
T Consensus 6 ~~e~~pi~~~N~vd--~~~~P~~F~Yi~~~~~~~~~~~~~~~~~~gC~C~~~~~C~~~~C~C~~~~~~~----~~~~~~~ 79 (302)
T 1ml9_A 6 THAQLPISIVNRED--DAFLNPNFRFIDHSIIGKNVPVADQSFRVGCSCASDEECMYSTCQCLDEMAPD----SDEEADP 79 (302)
T ss_dssp ---CCCEEEECSSS--SCCCCTTCEECSSCEECTTCCCCCGGGCCCCCCSSTTGGGSTTSGGGTTSCCC-----------
T ss_pred cCCCCCEEEEeCCC--CCCCCCCCEEeeeeecCCCccccCcccCCCccCcCCCCcCCCCCcChhhcccc----ccccccc
Confidence 4688888 899998 4456777778887777765432 23479999762 3443333331111100 00000 0
Q ss_pred HHHHhhhccccCCCCCCCCCC------CCCCccccc-CCcCccCCCchhhhcccccccccccCCCcceecCCccceEEeC
Q 000067 1826 LRTLNKQVRHFTGTGNTPMMY------PLQPVIEEI-EKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAYRKGLGVVCN 1898 (2445)
Q Consensus 1826 L~tLNkqVR~f~GcG~tP~~c------~ckPViECs-eC~CgeeC~NRllQ~C~~ilkai~r~PleVFrT~rKGwGVFAt 1898 (2445)
+... ..-.+...+...+.. .-.+++||. .|.|+..|.||++|.+.. .++++|.+..+||||||+
T Consensus 80 ~~~~--~~~~y~~~g~~~g~l~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~-------~~l~v~~t~~kG~Gv~A~ 150 (302)
T 1ml9_A 80 YTRK--KRFAYYSQGAKKGLLRDRVLQSQEPIYECHQGCACSKDCPNRVVERGRT-------VPLQIFRTKDRGWGVKCP 150 (302)
T ss_dssp ------CCSSBBCSSTTBTSBCHHHHHHCCCEECCCTTCSSCTTCTTCHHHHCCC-------SCEEEEECSSSCEEEECS
T ss_pred cccc--cccccccCCcccceeehhcccCCCCeEecCCCCCCCCCCCCcccccCCc-------cceEEEEcCCCceEEEEC
Confidence 0000 000111111111111 124579995 689999999999997543 478999999999999999
Q ss_pred ccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCC------ceEEEcCcccCCcc
Q 000067 1899 KEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGY------DLVVVDAMHKANYA 1972 (2445)
Q Consensus 1899 eDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gy------d~lVIDATrkGNiA 1972 (2445)
++ |++|+||+||+||||+.+++.++.... ......+.|.+.|....+. ... ..++|||+.+||+|
T Consensus 151 ~~--I~~G~~I~EY~Gevi~~~e~~~R~~~~------~~~~~~~~Y~f~l~~~~~~-~~~d~~~~~~~~~IDa~~~GN~a 221 (302)
T 1ml9_A 151 VN--IKRGQFVDRYLGEIITSEEADRRRAES------TIARRKDVYLFALDKFSDP-DSLDPLLAGQPLEVDGEYMSGPT 221 (302)
T ss_dssp SC--BCTTCEEEECCCEEECHHHHHHHHHHS------CGGGCHHHHEEECCSSCCS-SSSCHHHHSCCCEEECSSEECGG
T ss_pred Ce--eCCCCEEEEEeeEEeCHHHHHHHHHHH------hhhcCCceEEEEeccccCc-ccccccccCCcEEEeCcccCCHH
Confidence 87 999999999999999987765543211 1111234676666542111 000 23799999999999
Q ss_pred cccCCCCCCCeEEEEEEEC----CEEEEEEEECCCCCCCCeEEEecCCCCCCccc--------ccCeeEEeCCCCccccc
Q 000067 1973 SRICHSCRPNCEAKVTAVD----GHYQIGIYTVRGIHYGEEITFDYNSVTESKEE--------YEASVCLCGSQVCRGSY 2040 (2445)
Q Consensus 1973 RFINHSCdPNCetq~v~Vd----Ge~RIafFAlRDIkaGEELTFDYG~~~eskee--------~~k~kClCGS~nCRGsy 2040 (2445)
|||||||+|||.++.+..+ +.++|+|||+|||++||||||||+..++.... ...+.|+|||++|||+|
T Consensus 222 rfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~CGs~~Crg~l 301 (302)
T 1ml9_A 222 RFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLCGTAKCRGYL 301 (302)
T ss_dssp GGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC--------------------------------
T ss_pred HhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeCCCCcCcccc
Confidence 9999999999998765433 24799999999999999999999987653211 12479999999999964
No 7
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=100.00 E-value=4.6e-35 Score=337.22 Aligned_cols=250 Identities=20% Similarity=0.226 Sum_probs=155.2
Q ss_pred hhhhhcc-ccCCCccccCCccc-ccccccccccCCccee---eeecCcCccc-ccccc---ccCCCCcchhhhhhhhhHH
Q 000067 1752 YAEKLNA-QKNGSEELDMELPE-VKDYKPRKQLGDQVFE---QEVYGIDPYT-HNLLL---DSMPDELDWNLLEKHLFIE 1822 (2445)
Q Consensus 1752 ~~Ekl~~-~~ngtde~~~~~P~-vK~YkprKvlG~DV~E---qe~~GcDcyT-rn~L~---~~lP~el~Ws~~qKhkFIe 1822 (2445)
+.|++|+ ++|.+| +...|. -..|.++.+++..+.. ....||+|.. ..|.. ..++|.........
T Consensus 24 g~e~~pi~~~N~vd--~~~~p~~~F~Yi~~~~~~~~~~~~~~~~~~gC~C~~~~~C~~~~~~~C~C~~~~~~~~~----- 96 (299)
T 1mvh_A 24 EIEGPEVTLVNEVD--DEPCPSLDFQFISQYRLTQGVIPPDPNFQSGCNCSSLGGCDLNNPSRCECLDDLDEPTH----- 96 (299)
T ss_dssp TSSSSCEEEECSSC--CCCCSCCCSEECSSCEECTTCCCCCGGGCCCCCCCCSSSSCTTCTTTCSSSTTCCSSCC-----
T ss_pred CcCCCCEEEEeCCC--CCCCCCCCcEEccceecCCCcCcCCCcCCCCCcCcCCCCcCCCCCCCCccccccccccc-----
Confidence 6789998 899987 334555 4566666665554332 2237999964 23433 22222100000000
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCCCccccc-CCcCccCCCchhhhcccccccccccCCCcceecCCccceEEeCccC
Q 000067 1823 DVLLRTLNKQVRHFTGTGNTPMMYPLQPVIEEI-EKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAYRKGLGVVCNKEG 1901 (2445)
Q Consensus 1823 k~LL~tLNkqVR~f~GcG~tP~~c~ckPViECs-eC~CgeeC~NRllQ~C~~ilkai~r~PleVFrT~rKGwGVFAteDe 1901 (2445)
-.|...+..- ...-.+++||. .|.|+..|.||++|.+.. .++++|.+..+||||||+++
T Consensus 97 -----------~~y~~~g~l~-~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~-------~~l~v~~t~~~G~Gv~A~~~- 156 (299)
T 1mvh_A 97 -----------FAYDAQGRVR-ADTGAVIYECNSFCSCSMECPNRVVQRGRT-------LPLEIFKTKEKGWGVRSLRF- 156 (299)
T ss_dssp -----------CSBCTTSSBC-TTCCSEEECCCTTSCSCTTCTTCTGGGCCC-------SCEEEEECSSSSEEEEESSC-
T ss_pred -----------cccCCCCcee-ecCCCCeEeCCCCCCCCCCcCCcccccccc-------ccEEEEEcCCCcceEeeCce-
Confidence 0011111100 11123578995 689999999999987543 47899999999999999987
Q ss_pred CcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCcccCCcccccCCCCCC
Q 000067 1902 GFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRP 1981 (2445)
Q Consensus 1902 gIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDATrkGNiARFINHSCdP 1981 (2445)
|++|+||+||+||||+..++.++.. .+.. ....|.+.+....+ ...++|||+.+||+||||||||+|
T Consensus 157 -I~kG~~I~EY~Gevi~~~ea~~R~~------~y~~--~~~~Y~f~l~~~~~----~~~~~IDa~~~GN~aRfiNHSC~P 223 (299)
T 1mvh_A 157 -APAGTFITCYLGEVITSAEAAKRDK------NYDD--DGITYLFDLDMFDD----ASEYTVDAQNYGDVSRFFNHSCSP 223 (299)
T ss_dssp -BCTTCEEEECCCEEEEHHHHHHHHT------TCCS--CSCCCEEEECSSCS----SSCEEEECSSEECGGGGCEECSSC
T ss_pred -eCCCCEEEEeeeEECcHHHHHHHHH------hhhc--cCceEEEEecCCCC----CccEEEeCcccCChhheEeecCCC
Confidence 9999999999999999876544332 1211 23456555543211 124899999999999999999999
Q ss_pred CeEEEEEEEC----CEEEEEEEECCCCCCCCeEEEecCCCCCC--cc---------cccCeeEEeCCCCcccccc
Q 000067 1982 NCEAKVTAVD----GHYQIGIYTVRGIHYGEEITFDYNSVTES--KE---------EYEASVCLCGSQVCRGSYL 2041 (2445)
Q Consensus 1982 NCetq~v~Vd----Ge~RIafFAlRDIkaGEELTFDYG~~~es--ke---------e~~k~kClCGS~nCRGsyL 2041 (2445)
||.++.+.++ +.++|+|||+|||++||||||||+..++. .+ ....+.|+|||++|||+|.
T Consensus 224 N~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~k~~~~C~CGs~~Crg~l~ 298 (299)
T 1mvh_A 224 NIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRISKLRRQCKCGSANCRGWLF 298 (299)
T ss_dssp SEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSCCC----------------------------
T ss_pred CeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCcccccccccccccccccccCCcCcCCCCCCCccccC
Confidence 9998876654 45899999999999999999999987762 10 0123699999999999764
No 8
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=326.30 Aligned_cols=169 Identities=26% Similarity=0.381 Sum_probs=131.1
Q ss_pred CCccccc-CCcCccCCCchhhhcccccccccccCCCcceecC-CccceEEeCccCCcCCCCEEEEEecEEecchhhhhhh
Q 000067 1849 QPVIEEI-EKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAY-RKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQ 1926 (2445)
Q Consensus 1849 kPViECs-eC~CgeeC~NRllQ~C~~ilkai~r~PleVFrT~-rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERq 1926 (2445)
.+++||. .|.|+..|.||++|.+.. .++++|++. .+||||||+++ |++|+||+||+||||+.+++.++.
T Consensus 114 ~~i~EC~~~C~C~~~C~Nr~~q~g~~-------~~l~vfrt~~~kG~Gl~A~~~--I~~G~~I~EY~Gevi~~~ea~~R~ 184 (300)
T 2r3a_A 114 TPIYECNSRCQCGPDCPNRIVQKGTQ-------YSLCIFRTSNGRGWGVKTLVK--IKRMSFVMEYVGEVITSEEAERRG 184 (300)
T ss_dssp CCEECCCTTSSCCTTCTTCSGGGCCC-------SCEEEEECSSSCCEEEEESSC--BCTTCEEEEECCEEEEHHHHHHHH
T ss_pred CcEEeCCCCCCCCCcCCCcccccccc-------ccEEEEEeCCCceEEEEeCcc--ccCCCEeEEEeeEEecHHHHHHHH
Confidence 4578995 688999999999986533 478899986 69999999987 999999999999999987665433
Q ss_pred hhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCcccCCcccccCCCCCCCeEEEEEEECC----EEEEEEEECC
Q 000067 1927 DGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDG----HYQIGIYTVR 2002 (2445)
Q Consensus 1927 d~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDATrkGNiARFINHSCdPNCetq~v~VdG----e~RIafFAlR 2002 (2445)
.. +.. ....|.+.+.... +.++|||+.+||+||||||||+|||.+..|.+++ .++|+|||+|
T Consensus 185 ~~------y~~--~~~~Y~f~l~~~~------~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~r 250 (300)
T 2r3a_A 185 QF------YDN--KGITYLFDLDYES------DEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTR 250 (300)
T ss_dssp HT------CCH--HHHHTEEECCSSC------SSEEEECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESS
T ss_pred HH------hhh--ccccEEEEeecCC------ceEEEecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEcc
Confidence 21 110 1123444443211 2389999999999999999999999998887763 5899999999
Q ss_pred CCCCCCeEEEecCCCCCCc-----------ccccCeeEEeCCCCccccc
Q 000067 2003 GIHYGEEITFDYNSVTESK-----------EEYEASVCLCGSQVCRGSY 2040 (2445)
Q Consensus 2003 DIkaGEELTFDYG~~~esk-----------ee~~k~kClCGS~nCRGsy 2040 (2445)
||++||||||||+...... .....+.|+|||++|||+|
T Consensus 251 dI~~GEELt~dY~~~~~~~~~~~~~d~~~~~~~~~~~C~CGs~~Crg~l 299 (300)
T 2r3a_A 251 TINAGEELTFDYQMKGSGDISSDSIDHSPAKKRVRTVCKCGAVTCRGYL 299 (300)
T ss_dssp CBCTTCEEEECGGGSSCC--------------CCCCBCCCCCTTCCSBC
T ss_pred CCCCCCEEEEECCCCccccccccccccccccccCCCEeeCCCccccccC
Confidence 9999999999999874321 0113579999999999943
No 9
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=99.97 E-value=2.2e-31 Score=290.62 Aligned_cols=163 Identities=27% Similarity=0.444 Sum_probs=121.1
Q ss_pred cccccCCcCccCCCchhhhcccccccccccCCCcceecCCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhH
Q 000067 1851 VIEEIEKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIR 1930 (2445)
Q Consensus 1851 ViECseC~CgeeC~NRllQ~C~~ilkai~r~PleVFrT~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iR 1930 (2445)
.-.|..+.|...|.++.+|.. ...+++||.+..+||||||+++ |++|+||+||+|||++..++.++...+.
T Consensus 29 ~~~~~~~~~~~~~~~~~l~~~-------~~~~l~V~~s~~~G~GlfA~~~--I~~G~~I~EY~Gevi~~~e~~~R~~~y~ 99 (192)
T 2w5y_A 29 ARRATSMDLPMPMRFRHLKKT-------SKEAVGVYRSPIHGRGLFCKRN--IDAGEMVIEYAGNVIRSIQTDKREKYYD 99 (192)
T ss_dssp CCCGGGSSCCHHHHHTTHHHH-------HHHHEEEEECSSSSEEEEESSC--BCTTCEEEECCSEEEEGGGHHHHHHHHH
T ss_pred ccccccCCCCcchhHHHHhcc-------CCCcEEEEEcCCceeEEEECcc--cCCCCEEEEeeeeEechHHHHHHHHHHh
Confidence 344444444444444444422 2235788999999999999987 9999999999999999876554433221
Q ss_pred hhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCcccCCcccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCCCCeE
Q 000067 1931 SLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEI 2010 (2445)
Q Consensus 1931 rlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDATrkGNiARFINHSCdPNCetq~v~VdGe~RIafFAlRDIkaGEEL 2010 (2445)
. . ....|.+.+.. .++|||+..||+||||||||+|||.+..+.++|.++|+|||+|||++||||
T Consensus 100 ~---~----~~~~Y~f~l~~---------~~~IDa~~~Gn~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEEL 163 (192)
T 2w5y_A 100 S---K----GIGCYMFRIDD---------SEVVDATMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEEL 163 (192)
T ss_dssp H---H----TCCCCEEECSS---------SEEEECTTTCCGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEE
T ss_pred h---c----CCceeeeeecC---------ceEEECccccChhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEE
Confidence 1 1 11235444431 279999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCcccccCeeEEeCCCCccccc
Q 000067 2011 TFDYNSVTESKEEYEASVCLCGSQVCRGSY 2040 (2445)
Q Consensus 2011 TFDYG~~~eskee~~k~kClCGS~nCRGsy 2040 (2445)
||||+..++.. ...+.|+|||++|||++
T Consensus 164 t~dY~~~~~~~--~~~~~C~Cgs~~Crg~l 191 (192)
T 2w5y_A 164 TYDYKFPIEDA--SNKLPCNCGAKKCRKFL 191 (192)
T ss_dssp EECCCC---------CCBCCCCCTTCCSBC
T ss_pred EEEcCCchhcC--CCCceeECCCCCCcCcC
Confidence 99999877642 24689999999999953
No 10
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.94 E-value=2.8e-27 Score=249.19 Aligned_cols=126 Identities=27% Similarity=0.428 Sum_probs=100.9
Q ss_pred cCCCcceecCCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCc
Q 000067 1880 SRPDDKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYD 1959 (2445)
Q Consensus 1880 r~PleVFrT~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd 1959 (2445)
..+++++.++.+||||||+++ |++|+||+||+|||++..++..+.... ... .....|..++.... .
T Consensus 29 ~~~l~v~~~~~kG~Gl~A~~~--I~~G~~I~ey~Gevi~~~~~~~r~~~~---~~~---~~~~~y~~~~~~~~------~ 94 (166)
T 3f9x_A 29 EEGMKIDLIDGKGRGVIATKQ--FSRGDFVVEYHGDLIEITDAKKREALY---AQD---PSTGCYMYYFQYLS------K 94 (166)
T ss_dssp CTTEEEEEETTTEEEEEESSC--BCTTCEEEECCSEEEEHHHHHHHHHHH---TTC---TTSCCCEEEEEETT------E
T ss_pred ccCeEEEECCCceeEEEECCC--cCCCCEEEEeeceEcCHHHHHHHHHHH---hhc---cCCCceEEEEecCC------C
Confidence 347889999999999999987 999999999999999987665443221 111 12222322222111 2
Q ss_pred eEEEcCccc-CCcccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCCC
Q 000067 1960 LVVVDAMHK-ANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTE 2019 (2445)
Q Consensus 1960 ~lVIDATrk-GNiARFINHSCdPNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~e 2019 (2445)
.++|||+.. ||+||||||||+|||.+..+.+++.++|+|||+|||++||||||||+..+.
T Consensus 95 ~~~iDa~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 155 (166)
T 3f9x_A 95 TYCVDATRETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSK 155 (166)
T ss_dssp EEEEECCSCCSCSGGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCH
T ss_pred CeEEechhcCCChhheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChh
Confidence 389999996 999999999999999999999999999999999999999999999998764
No 11
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.88 E-value=5.5e-23 Score=233.61 Aligned_cols=142 Identities=15% Similarity=0.072 Sum_probs=99.4
Q ss_pred CCcccccCCcCccCCCchhhhcccccccccccCCCcceecC--CccceEEeCccCCcCCCCEEEEEecEEecchhhhhhh
Q 000067 1849 QPVIEEIEKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAY--RKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQ 1926 (2445)
Q Consensus 1849 kPViECseC~CgeeC~NRllQ~C~~ilkai~r~PleVFrT~--rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERq 1926 (2445)
.|+++|..+++...|.++++... .....+.+..+. +|||||||+++ |++|+||+||+||||+..++.++.
T Consensus 83 ~~~~~~d~~~~~~i~~~~~~~~~------~~~~~~~v~~S~i~~kG~GvfA~~~--I~~G~~I~eY~Gevi~~~e~~~R~ 154 (261)
T 2f69_A 83 NSVYHFDKSTSSCISTNALLPDP------YESERVYVAESLISSAGEGLFSKVA--VGPNTVMSFYNGVRITHQEVDSRD 154 (261)
T ss_dssp CCEECCCCCCSSCSCSCTTSCCH------HHHTTEEEEECSSTTCCEEEEESSC--BCTTCEEEEECCEEECHHHHHTSC
T ss_pred CceEecCcccCcceeCccccCCc------ccCceEEEEecCCCCCceEEEECcc--cCCCCEEEEEeeEEeCHHHHHHHh
Confidence 35666655544444555554321 111234555555 45999999987 999999999999999976654332
Q ss_pred hhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCc--------ccCCcccccCCCCCCCeEEEEEEECC-EEEEE
Q 000067 1927 DGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAM--------HKANYASRICHSCRPNCEAKVTAVDG-HYQIG 1997 (2445)
Q Consensus 1927 d~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDAT--------rkGNiARFINHSCdPNCetq~v~VdG-e~RIa 1997 (2445)
.. + .-|.+.+.. .++|||+ .+||+||||||||+|||.+..+...+ ...|+
T Consensus 155 ~~------~------~~~~f~l~~---------~~~IDa~~~~~~~~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~~i~ 213 (261)
T 2f69_A 155 WA------L------NGNTLSLDE---------ETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKC 213 (261)
T ss_dssp GG------G------CSSCEECSS---------SCEEECCTTTTSTTTCCSCCGGGCEECSSCSEEEEEEEETTTEEEEE
T ss_pred hh------h------ccceeeecC---------CeEEEccccccccccccccceeeEeeCCCCCeEEEEEEcCCCCcEEE
Confidence 11 1 012233321 2699995 59999999999999999999874433 24459
Q ss_pred EEECCCCCCCCeEEEecCCCCC
Q 000067 1998 IYTVRGIHYGEEITFDYNSVTE 2019 (2445)
Q Consensus 1998 fFAlRDIkaGEELTFDYG~~~e 2019 (2445)
|||+|||++||||||||++...
T Consensus 214 i~A~RdI~~GEELt~dYg~~~~ 235 (261)
T 2f69_A 214 IRTLRAVEADEELTVAYGYDHS 235 (261)
T ss_dssp EEESSCBCTTCEEEECCCCCSC
T ss_pred EEECcccCCCCEEEEEcCCccc
Confidence 9999999999999999998764
No 12
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.88 E-value=8.1e-24 Score=241.75 Aligned_cols=130 Identities=25% Similarity=0.354 Sum_probs=99.5
Q ss_pred CcceecCCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEE
Q 000067 1883 DDKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVV 1962 (2445)
Q Consensus 1883 leVFrT~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lV 1962 (2445)
...|.+..+||||||+++ |++|+||+||+|||+...+..+++ + ......+|+.++... .
T Consensus 138 ~~ry~~e~~G~GlfA~~~--I~kGe~I~EY~Geii~~~e~ee~~-----~---~~~~~~dF~i~~s~~-----------~ 196 (273)
T 3s8p_A 138 CNRYSSEQNGAKIVATKE--WKRNDKIELLVGCIAELSEIEENM-----L---LRHGENDFSVMYSTR-----------K 196 (273)
T ss_dssp ECCCTTCSSEEEEEESSC--BCTTCEEEEEEEEEEEECHHHHHH-----H---CCTTTSCTTEEEETT-----------T
T ss_pred ccceeecCCCceEEECCc--cCCCCEEEEEEEEEccccHHHHHH-----H---hhhcccccceecccc-----------c
Confidence 345777889999999998 999999999999998765433321 1 112234555544322 1
Q ss_pred EcCcccCCcccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCCCCcccccCeeEEeCCCCcccc
Q 000067 1963 VDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTESKEEYEASVCLCGSQVCRGS 2039 (2445)
Q Consensus 1963 IDATrkGNiARFINHSCdPNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~eskee~~k~kClCGS~nCRGs 2039 (2445)
.+|+..||.||||||||+|||.+.. .|..+|+|+|+|||++||||||||+...+.. ..+.|.||+.+|+|.
T Consensus 197 ~~a~~~g~~arfiNHSC~PN~~~~~---~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~---~~f~C~C~~c~crG~ 267 (273)
T 3s8p_A 197 NCAQLWLGPAAFINHDCRPNCKFVS---TGRDTACVKALRDIEPGEEISCYYGDGFFGE---NNEFCECYTCERRGT 267 (273)
T ss_dssp TEEEEEESGGGGCEECSSCSEEEEE---EETTEEEEEESSCBCTTCBCEECCCTTTTSG---GGTTCCCHHHHHHTC
T ss_pred cccceecchHHhhCCCCCCCeEEEE---cCCCEEEEEECceeCCCCEEEEecCchhcCC---CCeEEECCCCcCCCC
Confidence 3467789999999999999998743 3445899999999999999999999887654 257899999999994
No 13
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.85 E-value=2.3e-22 Score=203.20 Aligned_cols=109 Identities=24% Similarity=0.254 Sum_probs=88.4
Q ss_pred CCCcceecCCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCce
Q 000067 1881 RPDDKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDL 1960 (2445)
Q Consensus 1881 ~PleVFrT~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~ 1960 (2445)
.++.++.+..+||||||+++ |++|++|+||.|++++..++.. . ...|.+.+..
T Consensus 4 ~~~~v~~s~~~G~GvfA~~~--I~~G~~I~ey~g~vi~~~e~~~------~---------~~~y~f~~~~---------- 56 (119)
T 1n3j_A 4 DRVIVKKSPLGGYGVFARKS--FEKGELVEECLCIVRHNDDWGT------A---------LEDYLFSRKN---------- 56 (119)
T ss_dssp SSEEEECSCSSCCEEEECCC--BCSCEEECCCCCEEECSHHHHH------H---------SCSEEEEETT----------
T ss_pred CCEEEEECCCceeEEEECCc--CCCCCEEEEeeEEEECHHHHhh------c---------cCCeEEEeCC----------
Confidence 35678888999999999997 9999999999999999755422 0 1123332211
Q ss_pred EEEcCcccCCcccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCCCCc
Q 000067 1961 VVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTESK 2021 (2445)
Q Consensus 1961 lVIDATrkGNiARFINHSCdPNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~esk 2021 (2445)
|++..||++|||||||+|||.+.. +.+..++.|+|+|||++||||||||+..++..
T Consensus 57 ---d~~~~~~~~~~~NHsc~pN~~~~~--~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~ 112 (119)
T 1n3j_A 57 ---MSAMALGFGAIFNHSKDPNARHEL--TAGLKRMRIFTIKPIAIGEEITISYGDDYWLS 112 (119)
T ss_dssp ---EEEEESSSHHHHHSCSSCCCEEEE--CSSSSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred ---ccccccCceeeeccCCCCCeeEEE--ECCCeEEEEEEccccCCCCEEEEecCchhhcC
Confidence 778889999999999999999876 35667899999999999999999999887643
No 14
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.84 E-value=2.3e-21 Score=204.93 Aligned_cols=109 Identities=19% Similarity=0.195 Sum_probs=84.3
Q ss_pred Ccceec--CCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCce
Q 000067 1883 DDKYVA--YRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDL 1960 (2445)
Q Consensus 1883 leVFrT--~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~ 1960 (2445)
+.+..+ +.+||||||+++ |++|++|+||+||+++..+.. ...|.+.+....+ ..
T Consensus 31 l~l~~S~i~~~G~GVfA~~~--I~kG~~~gey~Ge~i~~~e~~-----------------~~~Y~f~i~~~~~-----~~ 86 (149)
T 2qpw_A 31 VRLFPSAVDKTRIGVWATKP--ILKGKKFGPFVGDKKKRSQVK-----------------NNVYMWEVYYPNL-----GW 86 (149)
T ss_dssp EEEEECSSCTTSEEEEESSC--BCTTCEECCCCCEEECGGGCC-----------------CSSSEEEEEETTT-----EE
T ss_pred eEEEEcCCCCCceEEEECCc--cCCCCEEEEEeCEEcCHHHhc-----------------cCceEEEEecCCC-----ee
Confidence 344444 467999999987 999999999999999753210 1234444432111 23
Q ss_pred EEEcCcc--cCCcccccCCCCCC---CeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCCC
Q 000067 1961 VVVDAMH--KANYASRICHSCRP---NCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTE 2019 (2445)
Q Consensus 1961 lVIDATr--kGNiARFINHSCdP---NCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~e 2019 (2445)
++|||+. .||++|||||||+| ||.+.. +++ +|.|||+|||++||||||||+..+.
T Consensus 87 ~~IDa~~~~~gn~~RfINhSc~p~eqNl~~~~--~~~--~I~~~A~RdI~~GEEL~~dY~~~~~ 146 (149)
T 2qpw_A 87 MCIDATDPEKGNWLRYVNWACSGEEQNLFPLE--INR--AIYYKTLKPIAPGEELLVWYNGEDN 146 (149)
T ss_dssp EEEECSSGGGSCGGGGCEECBTTBTCCEEEEE--ETT--EEEEEESSCBCTTCBCEECCCCCCC
T ss_pred EEEeCCCCCCCcceeeeeccCChhhcCEEEEE--ECC--EEEEEEccCCCCCCEEEEccCCccC
Confidence 6899998 99999999999999 998843 454 8999999999999999999998764
No 15
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.84 E-value=2.2e-21 Score=221.54 Aligned_cols=114 Identities=18% Similarity=0.136 Sum_probs=87.3
Q ss_pred CcceecC--CccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCce
Q 000067 1883 DDKYVAY--RKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDL 1960 (2445)
Q Consensus 1883 leVFrT~--rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~ 1960 (2445)
+.+..+. +|||||||+++ |++|+||+||+||+|+..++.++... + ..|.+.+.. .
T Consensus 165 ~~v~~S~i~GkG~Gvfa~~~--I~~G~~I~ey~Ge~i~~~~~~~r~~~------~------~~~~~~l~~---------~ 221 (293)
T 1h3i_A 165 VYVAESLISSAGEGLFSKVA--VGPNTVMSFYNGVRITHQEVDSRDWA------L------NGNTLSLDE---------E 221 (293)
T ss_dssp EEEEECSSSSSSEEEEESSC--BCTTCEEEEECCEEECHHHHHHSCGG------G------CTTEEECSS---------S
T ss_pred EEEeeeecCCCcceEEECCc--CCCCCEEEEeccEEcCHHHHhHHhhh------c------ccCEEecCC---------C
Confidence 4455444 46699999987 99999999999999997665443211 1 122333321 1
Q ss_pred EEEcC--------cccCCcccccCCCCCCCeEEEEEEECCEEE-EEEEECCCCCCCCeEEEecCCCCC
Q 000067 1961 VVVDA--------MHKANYASRICHSCRPNCEAKVTAVDGHYQ-IGIYTVRGIHYGEEITFDYNSVTE 2019 (2445)
Q Consensus 1961 lVIDA--------TrkGNiARFINHSCdPNCetq~v~VdGe~R-IafFAlRDIkaGEELTFDYG~~~e 2019 (2445)
++||| +..||+||||||||+|||.++.+...+..+ |+|||+|||++||||||||++...
T Consensus 222 ~~iDa~~~~~~~~~~~gn~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~~ 289 (293)
T 1h3i_A 222 TVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 289 (293)
T ss_dssp CEEECCTTTTSTTTCCSCCGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTBC
T ss_pred EEEeCcccccccceeeccceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCCC
Confidence 69999 779999999999999999999875544345 599999999999999999998764
No 16
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.80 E-value=2e-20 Score=211.56 Aligned_cols=125 Identities=22% Similarity=0.359 Sum_probs=91.3
Q ss_pred cceecCCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEE
Q 000067 1884 DKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVV 1963 (2445)
Q Consensus 1884 eVFrT~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVI 1963 (2445)
..|....+|+||||+++ |++|+||+||+|+++...+..++ . .......|..++-.. .+
T Consensus 111 ~Ry~~~~~G~Gv~A~~~--I~kGE~I~ey~Geli~~t~~e~~------~---~~~~~n~f~i~~~~~-----------~~ 168 (247)
T 3rq4_A 111 TRYSMETNGAKIVSTRA--WKKNEKLELLVGCIAELREADEG------L---LRAGENDFSIMYSTR-----------KR 168 (247)
T ss_dssp CCCTTCSSCEEEEESSC--BCTTCEEEEEEEEEEECCGGGGG------G---CCTTTSCTTEEEETT-----------TT
T ss_pred eeeeecCCcceEEeCCc--cCCCCEEEEEEeEEEeCcHHHHH------h---hhccCCcEEEEecCC-----------cc
Confidence 44666789999999997 99999999999999865332221 1 111233455443322 13
Q ss_pred cCcccCCcccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCCCCcccccCeeEEeCCCCccc
Q 000067 1964 DAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTESKEEYEASVCLCGSQVCRG 2038 (2445)
Q Consensus 1964 DATrkGNiARFINHSCdPNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~eskee~~k~kClCGS~nCRG 2038 (2445)
++...||+||||||||+|||.+..+ ++ .+|.|+|+|||++||||||+|+..++.. ..+.|.|++ |..
T Consensus 169 ~~~l~~~~ar~iNHSC~PN~~~~~~--~~-~~i~v~A~rdI~~GEElt~~Y~~~~~~~---~~f~C~C~~--C~~ 235 (247)
T 3rq4_A 169 SAQLWLGPAAFINHDCKPNCKFVPA--DG-NAACVKVLRDIEPGDEVTCFYGEGFFGE---KNEHCECHT--CER 235 (247)
T ss_dssp EEEEEESGGGGCEECSSCSEEEEEE--TT-TEEEEEESSCBCTTCBCEECCCTTSSSG---GGTTCCCHH--HHH
T ss_pred cceeecchhhhcCCCCCCCEEEEEe--CC-CEEEEEECCcCCCCCEEEEecCchhcCC---CCCEEECCC--CCC
Confidence 5667799999999999999976553 33 4899999999999999999999887743 246788775 643
No 17
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.57 E-value=6.6e-15 Score=159.14 Aligned_cols=107 Identities=15% Similarity=0.059 Sum_probs=74.1
Q ss_pred CCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCcc-
Q 000067 1889 YRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMH- 1967 (2445)
Q Consensus 1889 ~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDATr- 1967 (2445)
+++|+||||.+. |++|++|++|.|++++..+... . ....|...+...+ |...++|||+.
T Consensus 37 ~~~G~GVfA~~~--IpkGt~fGpY~Ge~i~~~ea~~----------~----~~~~y~w~i~~~~----G~~~~~IDa~~e 96 (170)
T 3ep0_A 37 PGEGLGIFSKTW--IKAGTEMGPFTGRVIAPEHVDI----------C----KNNNLMWEVFNED----GTVRYFIDASQE 96 (170)
T ss_dssp SSCSEEEEESSC--BCTTCEEEEECCEEECC------------------------CEEEEECTT----SSEEEEEECC--
T ss_pred CCCceEEEECcc--cCCCCEEEecCceecCHHHhcc----------c----cCCceEEEEecCC----CcEEEEEECCCC
Confidence 457999999987 9999999999999998643211 0 1123444443221 21237999998
Q ss_pred -cCCcccccCCCCC---CCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCCC
Q 000067 1968 -KANYASRICHSCR---PNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTE 2019 (2445)
Q Consensus 1968 -kGNiARFINHSCd---PNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~e 2019 (2445)
.||++|||||+|. +||.+.. +++ +|.|+|+|||.+||||+|+|+..+.
T Consensus 97 ~~~NWmR~Vn~A~~~~eqNl~a~q--~~~--~I~~~a~RdI~pGeELlvwYg~~y~ 148 (170)
T 3ep0_A 97 DHRSWMTYIKCARNEQEQNLEVVQ--IGT--SIFYKAIEMIPPDQELLVWYGNSHN 148 (170)
T ss_dssp ----GGGGCEECSSTTTCCEEEEE--ETT--EEEEEESSCBCTTCBCEEEECC---
T ss_pred CCcceeeeEEecCCcccCCeeeEE--ECC--EEEEEECcCcCCCCEEEEeeCHHHH
Confidence 8999999999996 8988755 455 8999999999999999999998764
No 18
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.53 E-value=9.2e-15 Score=154.84 Aligned_cols=108 Identities=17% Similarity=0.075 Sum_probs=74.0
Q ss_pred CCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCcc-
Q 000067 1889 YRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMH- 1967 (2445)
Q Consensus 1889 ~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDATr- 1967 (2445)
.+.|+||||++. |++|+++++|.|++++..+...+. +... -|...++.. +....+|||+.
T Consensus 32 ~~~g~GVfa~~~--Ip~G~~fGPy~Ge~~~~~e~~~~~-----------~~~~-~y~w~i~~~-----~~~~~~iD~~~~ 92 (151)
T 3db5_A 32 VGAEVGVWTGET--IPVRTCFGPLIGQQSHSMEVAEWT-----------DKAV-NHIWKIYHN-----GVLEFCIITTDE 92 (151)
T ss_dssp ---CEEEEESSC--BCTTCEECCCCCEEEC----------------------C-CSEEEEEET-----TEEEEEEECCCT
T ss_pred CCCceEEEEecc--cCCCCEEEEeccEEeCHHHhhccc-----------ccCC-CceEEEEeC-----CCEEEEEECcCC
Confidence 457999999986 999999999999999864432210 0011 133323321 11236899997
Q ss_pred -cCCcccccCCCCC---CCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCCC
Q 000067 1968 -KANYASRICHSCR---PNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTE 2019 (2445)
Q Consensus 1968 -kGNiARFINHSCd---PNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~e 2019 (2445)
.||++|||||+|. +||.+.. +++ +|.|+|+|||++||||+++|+..+.
T Consensus 93 ~~~NWmR~Vn~A~~~~eqNl~a~q--~~~--~I~~~a~rdI~pGeELlv~Yg~~y~ 144 (151)
T 3db5_A 93 NECNWMMFVRKARNREEQNLVAYP--HDG--KIFFCTSQDIPPENELLFYYSRDYA 144 (151)
T ss_dssp TTSCGGGGCEECSSTTTCCEEEEE--ETT--EEEEEESSCBCTTCBCEEEECC---
T ss_pred CCCcceeEEEecCCcccCceEEEE--ECC--EEEEEEccccCCCCEEEEecCHHHH
Confidence 5999999999995 5998855 455 7899999999999999999998764
No 19
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.50 E-value=1e-14 Score=160.68 Aligned_cols=118 Identities=16% Similarity=0.084 Sum_probs=87.6
Q ss_pred CCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEEcCcc-
Q 000067 1889 YRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMH- 1967 (2445)
Q Consensus 1889 ~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVIDATr- 1967 (2445)
+.+|+||||++. |++|+++++|.|++++..+.. ++ ....|...+... +....+|||+.
T Consensus 68 ~~~G~GVfa~~~--IpkGt~fGPY~Ge~~~~~e~~-------------~~-~~~~y~w~i~~~-----g~~~~~IDas~e 126 (196)
T 3dal_A 68 SEEVIGVMSKEY--IPKGTRFGPLIGEIYTNDTVP-------------KN-ANRKYFWRIYSR-----GELHHFIDGFNE 126 (196)
T ss_dssp SCCEEEEEESSC--BCTTEEECCCCCEEECTTTCC-----------------CCTTEEEEEET-----TEEEEEEECCCT
T ss_pred CCceeEEEEccc--cCCCCEEEeccceEcCHHHhh-------------hc-cCCcceeeeccC-----CCEEEEEECCCC
Confidence 458999999986 999999999999999864321 01 112233333321 11237999987
Q ss_pred -cCCcccccCCCCC---CCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCCCCcccccCeeEEeCCCCccccc
Q 000067 1968 -KANYASRICHSCR---PNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSY 2040 (2445)
Q Consensus 1968 -kGNiARFINHSCd---PNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~eskee~~k~kClCGS~nCRGsy 2040 (2445)
.||++|||||+|. +||.+.. +++ +|.|+|+|||++||||+|+|+..+ .+.||.+.|+..+
T Consensus 127 ~~gNWmRfVn~A~~~~eqNl~a~q--~~~--~I~y~a~RdI~pGeELlvwYg~~Y---------~~~lg~p~~~~~~ 190 (196)
T 3dal_A 127 EKSNWMRYVNPAHSPREQNLAACQ--NGM--NIYFYTIKPIPANQELLVWYCRDF---------AERLHYPYPGELT 190 (196)
T ss_dssp TSSCGGGGCEECSSTTTCCEEEEE--ETT--EEEEEESSCBCTTCBCEEEECHHH---------HHHTTCCCTTCCC
T ss_pred CCCceEEeEEecCCcccCCcEEEE--ECC--EEEEEECcccCCCCEEEEecCHHH---------HHHcCCCCCHHHH
Confidence 8999999999995 7988754 455 789999999999999999999644 3667777777644
No 20
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.31 E-value=9e-13 Score=148.71 Aligned_cols=122 Identities=16% Similarity=0.135 Sum_probs=83.2
Q ss_pred cceecCCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCceeEeecCCCCCCCCCceEEE
Q 000067 1884 DKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVV 1963 (2445)
Q Consensus 1884 eVFrT~rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY~m~L~r~kgDa~Gyd~lVI 1963 (2445)
.+..+...|.||||... .|++|+.+++|.|++++..+. ...|...+....+ ...+|
T Consensus 75 ~vr~S~i~~~Gv~~~~~-~IpkGt~fGPY~Ge~~s~~ea------------------~~~y~wei~~~~g-----~~~~I 130 (237)
T 3ray_A 75 EVVKDTSGESDVRCVNE-VIPKGHIFGPYEGQISTQDKS------------------AGFFSWLIVDKNN-----RYKSI 130 (237)
T ss_dssp EEEECTTSCEEEEECSS-CBCTTEEECCCCSEEECC-----------------------CCEEEEECTTS-----CEEEE
T ss_pred EEEEcCCCCcceEEEeC-cCCCCCEEEecccEEcChHHc------------------cccceEEEEcCCC-----cEEEE
Confidence 34455667899999853 699999999999999975221 0124333332211 13699
Q ss_pred cCcc--cCCcccccCCCCC---CCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCCCCcccccCeeEEeCCCCccc
Q 000067 1964 DAMH--KANYASRICHSCR---PNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTESKEEYEASVCLCGSQVCRG 2038 (2445)
Q Consensus 1964 DATr--kGNiARFINHSCd---PNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~eskee~~k~kClCGS~nCRG 2038 (2445)
||+. .||++|||||+|. +||.+.. +++ +|.|+|+|||.+||||+|+|+..+. ....+.|++..|+.
T Consensus 131 Dgsde~~gNWmRfVn~Ar~~~EqNL~A~q--~~~--~Iyy~a~RdI~pGeELlVwYg~~Y~-----~~l~~~~~~~~~~~ 201 (237)
T 3ray_A 131 DGSDETKANWMRYVVISREEREQNLLAFQ--HSE--RIYFRACRDIRPGEWLRVWYSEDYM-----KRLHSMSQETIHRN 201 (237)
T ss_dssp ECCCTTTSCGGGGCEECCCTTTCCEEEEE--ETT--EEEEEESSCBCTTCBCEEEECHHHH-----HHHCC---------
T ss_pred ecCCCCCCcceeEEEcCCCcccccceeEE--eCC--EEEEEEccccCCCCEEEEeeCHHHH-----HHhcccccchhccc
Confidence 9997 7999999999995 7987754 465 7899999999999999999997664 23678999999987
No 21
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.23 E-value=8.5e-12 Score=132.89 Aligned_cols=106 Identities=11% Similarity=0.057 Sum_probs=74.5
Q ss_pred CccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCCce--eEeecCCC-CCCCCCceEEEcCc
Q 000067 1890 RKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFY--NIYLERPK-GDADGYDLVVVDAM 1966 (2445)
Q Consensus 1890 rKGwGVFAteDegIpKGEFI~EYvGEVIt~eE~~ERqd~iRrlq~~skd~~~dFY--~m~L~r~k-gDa~Gyd~lVIDAT 1966 (2445)
..|+||||++. |++|+.+++|.|++++..+..+ .+| .+++.... .+..+-..++||++
T Consensus 29 ~~g~GVfA~~~--IpkGt~fGPy~Ge~~~~~e~~~-----------------~~~~~~v~~~d~~~~~~~~~~~~~iD~~ 89 (152)
T 3ihx_A 29 RFLGGVFSKRR--IPKRTQFGPVEGPLVRGSELKD-----------------CYIHLKVSLDKGDRKERDLHEDLWFELS 89 (152)
T ss_dssp TTTCSEEESSC--BCSSCEECCCCSCEECSTTCCS-----------------SSCCCBC---------------CEECCC
T ss_pred ecCCeEEECce--ecCCCEEEeeccEEcCHHHhcc-----------------CcceEEEEccccccccccCCccEEEEcc
Confidence 45899999986 9999999999999998643210 112 11111100 00001123699998
Q ss_pred c--cCCcccccCCCCC---CCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCC
Q 000067 1967 H--KANYASRICHSCR---PNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVT 2018 (2445)
Q Consensus 1967 r--kGNiARFINHSCd---PNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~ 2018 (2445)
. .||++|||||+|. +||.+.. .++ +|.+.|+|+|.+||||+++|+..+
T Consensus 90 ~~~~~NWmr~vn~a~~~~eqNl~a~q--~~~--~I~~~~~r~I~pGeELlv~Y~~~y 142 (152)
T 3ihx_A 90 DETLCNWMMFVRPAQNHLEQNLVAYQ--YGH--HVYYTTIKNVEPKQELKVWYAASY 142 (152)
T ss_dssp CTTTSCGGGGCCBCCSTTTCCEEEEE--CSS--SEEEEESSCBCTTCBCCEEECHHH
T ss_pred CCCCCcceeeeeccCCccCCCcEEEE--eCC--eEEEEEeeecCCCCEEEEechHHH
Confidence 7 6999999999997 7988754 355 688999999999999999999654
No 22
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.40 E-value=7.5e-08 Score=117.92 Aligned_cols=66 Identities=26% Similarity=0.473 Sum_probs=47.1
Q ss_pred cccccCCCCCCCeEEEEEEECCE-----------EEEEEEECCCCCCCCeEEEecCCCCCCcccc-----cCeeEEeCCC
Q 000067 1971 YASRICHSCRPNCEAKVTAVDGH-----------YQIGIYTVRGIHYGEEITFDYNSVTESKEEY-----EASVCLCGSQ 2034 (2445)
Q Consensus 1971 iARFINHSCdPNCetq~v~VdGe-----------~RIafFAlRDIkaGEELTFDYG~~~eskee~-----~k~kClCGS~ 2034 (2445)
.+.||||||.|||.+.. .++. .++.|+|+|||++||||||+|.......... ....+.|.+.
T Consensus 200 ~~s~~NHSC~PN~~~~~--~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C~C~ 277 (490)
T 3n71_A 200 NLGLVNHDCWPNCTVIF--NNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCE 277 (490)
T ss_dssp TGGGCEECSSCSEEEEE--ECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCCCCH
T ss_pred hhhhcccCCCCCeeEEe--cCCccccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEeeCC
Confidence 46789999999998654 2331 3899999999999999999999765432211 1123455667
Q ss_pred Cccc
Q 000067 2035 VCRG 2038 (2445)
Q Consensus 2035 nCRG 2038 (2445)
.|..
T Consensus 278 ~C~~ 281 (490)
T 3n71_A 278 HCQK 281 (490)
T ss_dssp HHHH
T ss_pred CCCC
Confidence 7876
No 23
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.38 E-value=2e-07 Score=112.20 Aligned_cols=65 Identities=29% Similarity=0.462 Sum_probs=48.2
Q ss_pred CcccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCCCCcccc-----cCeeEEeCCCCccc
Q 000067 1970 NYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTESKEEY-----EASVCLCGSQVCRG 2038 (2445)
Q Consensus 1970 NiARFINHSCdPNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~eskee~-----~k~kClCGS~nCRG 2038 (2445)
..++||||||.|||.+.. .++ ++.|+|+|||++|||||++|.......... ....|.|++..|..
T Consensus 200 ~~~s~~NHsC~PN~~~~~--~~~--~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~ 269 (429)
T 3qwp_A 200 PSISLLNHSCDPNCSIVF--NGP--HLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQT 269 (429)
T ss_dssp TTGGGCEECSSCSEEEEE--ETT--EEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHHHHHHCCCCCSHHHHH
T ss_pred hhhHhhCcCCCCCeEEEE--eCC--EEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHHhccCCeEeeCCCCCC
Confidence 457899999999998754 343 688999999999999999998765432211 12346667777876
No 24
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.26 E-value=4.5e-07 Score=109.65 Aligned_cols=45 Identities=24% Similarity=0.324 Sum_probs=37.6
Q ss_pred cccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCCCC
Q 000067 1971 YASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTE 2019 (2445)
Q Consensus 1971 iARFINHSCdPNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~~e 2019 (2445)
.+.||||||.|||.+. +.++ ++.|+|+|||++||||||+|.....
T Consensus 201 ~~s~~NHsC~PN~~~~--~~~~--~~~~~a~r~I~~Geel~i~Y~~~~~ 245 (433)
T 3qww_A 201 DVALMNHSCCPNVIVT--YKGT--LAEVRAVQEIHPGDEVFTSYIDLLY 245 (433)
T ss_dssp TGGGSEECSSCSEEEE--EETT--EEEEEESSCBCTTCEEEECCSCTTS
T ss_pred cccccCCCCCCCceEE--EcCC--EEEEEeccCcCCCCEEEEeecCCcC
Confidence 4679999999999764 3344 6789999999999999999997654
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.13 E-value=0.00071 Score=75.99 Aligned_cols=106 Identities=19% Similarity=0.323 Sum_probs=81.1
Q ss_pred ccCccccccchHHHHHHHHHhhhhhhhHHhhcchhhHHHHHhhhcccceeeeccCCCCCchhHHHHHHHh----------
Q 000067 1251 ESGGWGLLDGHTLAHVFHFLRSDMKSLAFASLTCRHWRAAVRFYKGISRQVDLSSVGPNCTDSLIRKTLN---------- 1320 (2445)
Q Consensus 1251 ~~~~w~ll~g~~lar~fh~lr~d~ksl~~~~~tc~~w~~a~~~yk~~~~~~~~ss~g~~ctd~~~~~~~~---------- 1320 (2445)
+..+|.-|.-.+|..||.|| +.+.++-++.+||+|+.++.- ....+.+||+...-. +..+..++.
T Consensus 5 ~~~~~~~LP~eil~~If~~L--~~~d~~~~~~vc~~W~~~~~~-~~~~~~l~l~~~~~~--~~~~~~~~~~~l~~L~l~~ 79 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCL--CLPELLKVSGVCKRWYRLASD-ESLWQTLDLTGKNLH--PDVTGRLLSQGVIAFRCPR 79 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTS--CHHHHHHTTSSCHHHHHHHTC-STTSSEEECTTCBCC--HHHHHHHHHTTCSEEECTT
T ss_pred ccCChhhCCHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHhcC-chhheeeccccccCC--HHHHHhhhhccceEEEcCC
Confidence 45689999999999999999 566889999999999999843 345678999865433 555555521
Q ss_pred ---------hhcccccceeeecccccCChhHHHHHHHhCCCcceEeecccc
Q 000067 1321 ---------AFDKEKLNSILLVGCTNITSGMLEEILQSFPHLSSIDIRGCG 1362 (2445)
Q Consensus 1321 ---------~y~~~~~~~~~l~gc~~~~~~~l~~~l~~~p~~~~~~i~gc~ 1362 (2445)
.+.-.+++.+-|.+|. |+...+..++..+|.|.+++|.+|.
T Consensus 80 n~l~~~~~~~~~~~~L~~L~L~~~~-l~~~~~~~~~~~~~~L~~L~L~~~~ 129 (336)
T 2ast_B 80 SFMDQPLAEHFSPFRVQHMDLSNSV-IEVSTLHGILSQCSKLQNLSLEGLR 129 (336)
T ss_dssp CEECSCCCSCCCCBCCCEEECTTCE-ECHHHHHHHHTTBCCCSEEECTTCB
T ss_pred ccccccchhhccCCCCCEEEccCCC-cCHHHHHHHHhhCCCCCEEeCcCcc
Confidence 1123667888888886 8888788899999999999999994
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.96 E-value=0.0016 Score=78.59 Aligned_cols=127 Identities=24% Similarity=0.349 Sum_probs=76.5
Q ss_pred ccCccccccchHHHHHHHHHhhhhhhhHHhhcchhhHHHHHhhhc--------------------ccceeeeccCCCCCc
Q 000067 1251 ESGGWGLLDGHTLAHVFHFLRSDMKSLAFASLTCRHWRAAVRFYK--------------------GISRQVDLSSVGPNC 1310 (2445)
Q Consensus 1251 ~~~~w~ll~g~~lar~fh~lr~d~ksl~~~~~tc~~w~~a~~~yk--------------------~~~~~~~~ss~g~~c 1310 (2445)
+...|.-|--.+|.+||.||- +.+.++-++++||+|+.+...-. .-.+.++|+.- +..
T Consensus 2 ~~d~~~~LPdevL~~If~~L~-~~~d~~~~s~vck~W~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~L~~L~L~~~-~~~ 79 (594)
T 2p1m_B 2 QKRIALSFPEEVLEHVFSFIQ-LDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRSVELKGK-PHF 79 (594)
T ss_dssp --------CHHHHHHHHHTCC-CHHHHHHHHTSCHHHHHHHHHHCCEEEESSTTSSCHHHHHHHCTTCCEEEEECS-CGG
T ss_pred cccchhhCCHHHHHHHHhhcC-CchhHHHHHHHHHHHHHhhhhhceEEeeccccccCHHHHHhhCCCceEEeccCC-Cch
Confidence 345788899999999999996 25788999999999998732111 01233444331 111
Q ss_pred -------------hhHHHHHHHhhhcccccceeeecccccCChhHHHHHHHhCCCcceEeecccccccc-----ccccCC
Q 000067 1311 -------------TDSLIRKTLNAFDKEKLNSILLVGCTNITSGMLEEILQSFPHLSSIDIRGCGQFGE-----LALKFP 1372 (2445)
Q Consensus 1311 -------------td~~~~~~~~~y~~~~~~~~~l~gc~~~~~~~l~~~l~~~p~~~~~~i~gc~q~~~-----l~~~f~ 1372 (2445)
.+..+..+...+ .+++.+-|.+|. ++...+..+...+|.|.++++.+|..+++ +....+
T Consensus 80 ~~~~l~~~~~~~~~~~~l~~l~~~~--~~L~~L~L~~~~-~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~ 156 (594)
T 2p1m_B 80 ADFNLVPDGWGGYVYPWIEAMSSSY--TWLEEIRLKRMV-VTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCR 156 (594)
T ss_dssp GGGTCSCTTSCCBCHHHHHHHHHHC--TTCCEEEEESCB-CCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCT
T ss_pred hhcccccccccchhhHHHHHHHHhC--CCCCeEEeeCcE-EcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCC
Confidence 222333333322 367888888885 78878887777788888888888876665 223556
Q ss_pred ccceeecccc
Q 000067 1373 NINWVKSQKS 1382 (2445)
Q Consensus 1373 ~~~w~~~~~~ 1382 (2445)
+++.+.=..+
T Consensus 157 ~L~~L~L~~~ 166 (594)
T 2p1m_B 157 NLKELDLRES 166 (594)
T ss_dssp TCCEEECTTC
T ss_pred CCCEEeCcCC
Confidence 6666654433
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.60 E-value=0.018 Score=69.63 Aligned_cols=34 Identities=26% Similarity=0.447 Sum_probs=28.5
Q ss_pred ccchHHHHHHHHHhhhhhhhHHhhcchhhHHHHHh
Q 000067 1258 LDGHTLAHVFHFLRSDMKSLAFASLTCRHWRAAVR 1292 (2445)
Q Consensus 1258 l~g~~lar~fh~lr~d~ksl~~~~~tc~~w~~a~~ 1292 (2445)
|--.+|.+||.||. +.+.++.+++.||+|+.+..
T Consensus 16 LPdeil~~I~~~L~-~~~d~~~~s~vck~W~~~~~ 49 (592)
T 3ogk_B 16 TVDDVIEQVMTYIT-DPKDRDSASLVCRRWFKIDS 49 (592)
T ss_dssp CGGGTHHHHHTTCC-CHHHHHHHTTSCHHHHHHHH
T ss_pred CCHHHHHHHHHhcC-CHHHHHHHHHHhHHHHHhhh
Confidence 66679999999993 46788899999999998754
No 28
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=95.47 E-value=0.0084 Score=73.32 Aligned_cols=44 Identities=18% Similarity=0.227 Sum_probs=36.0
Q ss_pred CcccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCC
Q 000067 1970 NYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSV 2017 (2445)
Q Consensus 1970 NiARFINHSCdPNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~ 2017 (2445)
-++=++||+|+|||.+.. ++. .+.++|.|+|++||||+++||..
T Consensus 221 P~~D~~NH~~~~~~~~~~---~~~-~~~~~a~~~i~~Geei~~~YG~~ 264 (449)
T 3qxy_A 221 PAADILNHLANHNANLEY---SAN-CLRMVATQPIPKGHEIFNTYGQM 264 (449)
T ss_dssp TTGGGCEECSSCSEEEEE---CSS-EEEEEESSCBCTTCEEEECCSSC
T ss_pred ecHHHhcCCCCCCeEEEE---eCC-eEEEEECCCcCCCchhhccCCCC
Confidence 456799999999987543 332 67889999999999999999973
No 29
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=94.89 E-value=0.0086 Score=72.41 Aligned_cols=48 Identities=23% Similarity=0.342 Sum_probs=35.3
Q ss_pred CcccccCCCCCCCeEEEEEEECC-------EEEEEEEECCCCCCCCeEEEecCCC
Q 000067 1970 NYASRICHSCRPNCEAKVTAVDG-------HYQIGIYTVRGIHYGEEITFDYNSV 2017 (2445)
Q Consensus 1970 NiARFINHSCdPNCetq~v~VdG-------e~RIafFAlRDIkaGEELTFDYG~~ 2017 (2445)
-++=++||+|.||.....+.+++ ...+.+.|.++|++||||+++||..
T Consensus 188 P~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~ 242 (440)
T 2h21_A 188 PMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLN 242 (440)
T ss_dssp SSTTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTT
T ss_pred echHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCC
Confidence 34568999999985333333332 3578899999999999999999964
No 30
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=94.88 E-value=0.013 Score=51.75 Aligned_cols=40 Identities=23% Similarity=0.402 Sum_probs=33.9
Q ss_pred ccCccccccchHHHHHHHHHhhhhhhhHHhhcchhhHHHHHh
Q 000067 1251 ESGGWGLLDGHTLAHVFHFLRSDMKSLAFASLTCRHWRAAVR 1292 (2445)
Q Consensus 1251 ~~~~w~ll~g~~lar~fh~lr~d~ksl~~~~~tc~~w~~a~~ 1292 (2445)
....|..|--.+|.+||.|| +.+.|+-++.+||.|+.++.
T Consensus 5 ~~~~~~~LP~eil~~I~~~L--~~~dl~~~~~Vck~w~~~~~ 44 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCL--CLPELLKVSGVCKRWYRLAS 44 (53)
T ss_dssp ----CCSSCHHHHHHHHTTS--CGGGHHHHHTTCHHHHHHHT
T ss_pred CCCCHHHCCHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHhC
Confidence 34579999999999999999 68999999999999999885
No 31
>1wh2_A Hypothetical protein AT5G08430; GYF domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} SCOP: d.76.1.1
Probab=94.80 E-value=0.012 Score=57.49 Aligned_cols=49 Identities=22% Similarity=0.345 Sum_probs=42.3
Q ss_pred ccceEEecCCCCccCCCcHHHHHHHHhhcccccCcccccccCceeeecc
Q 000067 1043 LGEWYYLDGAGHERGPSSFSELQVLVDQGCIQKHTSVFRKFDKVWVPLT 1091 (2445)
Q Consensus 1043 ~GdWyYlDg~G~E~GP~sfseLQ~lv~~g~i~~~sSvfRK~D~~WvPv~ 1091 (2445)
---|||+|..|..|||||..+|+.-.+.|.+...--|.|....-|-||+
T Consensus 17 ~~~W~Y~Dp~g~iQGPFs~~~M~~W~~~GyF~~~L~Vrr~~~~~~~~i~ 65 (78)
T 1wh2_A 17 KLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVWMTGESMESAVL 65 (78)
T ss_dssp SCCEEEECTTSCEEEEECHHHHHHHHTTTSSCSCCEEEETTSCTTSCEE
T ss_pred cCeEEEECCCCCCcCCcCHHHHHHHHHcCCCCCCceEEEeCCCCcceeh
Confidence 3479999999999999999999999999999988888887755555555
No 32
>3k3v_A Protein SMY2; GYF domain, poly-proline binding, domain SWAP, ragnya, phosphoprotein, protein binding; 1.80A {Saccharomyces cerevisiae} PDB: 3fma_A
Probab=94.19 E-value=0.018 Score=58.67 Aligned_cols=52 Identities=17% Similarity=0.358 Sum_probs=46.2
Q ss_pred cceEEecCCCCccCCCcHHHHHHHHhhcccccCcccccc--------cCceeeecccccc
Q 000067 1044 GEWYYLDGAGHERGPSSFSELQVLVDQGCIQKHTSVFRK--------FDKVWVPLTFATE 1095 (2445)
Q Consensus 1044 GdWyYlDg~G~E~GP~sfseLQ~lv~~g~i~~~sSvfRK--------~D~~WvPv~~~~~ 1095 (2445)
-.|||+|-.|..||||+-.+++.-...|.+...--|=|. +|..|+||.....
T Consensus 16 ~~W~Y~Dp~G~vQGPFs~~~M~~W~~~GYF~~~L~VrR~~~~~~p~g~d~~F~~Lgel~~ 75 (100)
T 3k3v_A 16 SSWRYIDTQGQIHGPFTTQMMSQWYIGGYFASTLQISRLGSTPETLGINDIFITLGELMT 75 (100)
T ss_dssp CEEEEECTTSCEEEEEEHHHHHHHHHTTCCCTTCEEEECCSSCCSSSCBTCCEEHHHHHH
T ss_pred ceEEEECCCCCCcCCcCHHHHHHHHHcCCCCCCceEEEcCCCCCccCCCCceeeHHHHHH
Confidence 469999999999999999999999999999998887775 5678998877655
No 33
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=92.30 E-value=0.061 Score=66.86 Aligned_cols=45 Identities=11% Similarity=0.045 Sum_probs=33.4
Q ss_pred CcccccCCCCCCCeEEEEEEECCEEEEEEEECCCCCCCCeEEEecCCC
Q 000067 1970 NYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSV 2017 (2445)
Q Consensus 1970 NiARFINHSCdPNCetq~v~VdGe~RIafFAlRDIkaGEELTFDYG~~ 2017 (2445)
-++=++||+|.||.. .+..++ -.+.++|.++|++||||+++||..
T Consensus 271 P~~Dm~NH~~~~~~~--~~~~~~-~~~~~~a~~~i~~Geei~isYG~~ 315 (497)
T 3smt_A 271 PLWDMCNHTNGLITT--GYNLED-DRCECVALQDFRAGEQIYIFYGTR 315 (497)
T ss_dssp TTGGGCEECSCSEEE--EEETTT-TEEEEEESSCBCTTCEEEECCCSC
T ss_pred chHHhhcCCCcccce--eeeccC-CeEEEEeCCccCCCCEEEEeCCCC
Confidence 346689999999632 222222 256789999999999999999964
No 34
>2i7k_A Bromodomain-containing protein 7; helix, LEFT-handed four-helix bundle, transcription; NMR {Homo sapiens}
Probab=83.77 E-value=1.6 Score=45.03 Aligned_cols=68 Identities=22% Similarity=0.391 Sum_probs=54.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHhcccccccchh------------------HHHHhhhccccccccCCcchhhhHHHHHHH
Q 000067 1474 SENGYKRMEEFLASSLKEIMRVNTFEFFVPKV------------------AEIEGRMKKGYYISHGLGSVKDDISRMCRD 1535 (2445)
Q Consensus 1474 ~e~~y~~~e~f~~~~l~~im~~~~~dff~~kv------------------~~ie~~~k~gyy~~~g~~~~k~di~~mcrd 1535 (2445)
+|.+-.-+...|..-|+.||+.....+|.--| ..|+.|+++|+|.+ +..+..|+..|+..
T Consensus 2 ~e~~~~~l~~~l~~il~~L~~~~~~~~F~~PVd~~~~pdY~~iIk~PMDL~tI~~kl~~~~Y~s--~~ef~~Dv~Li~~N 79 (117)
T 2i7k_A 2 EEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQS--IEELKDNFKLMCTN 79 (117)
T ss_dssp CCTTHHHHHHHHHHHHHHHHTSSGGGTSSSCCCTTTSSSHHHHCSCCCCHHHHHHHHTTTSCCS--HHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHhCcccHHhcCCCCccccCCHHHHhCCCCCHHHHHHHHHcCCCCC--HHHHHHHHHHHHHH
Confidence 35566677888889999999887777775333 56899999999975 67899999999999
Q ss_pred HHHhccCC
Q 000067 1536 AIKAKNRG 1543 (2445)
Q Consensus 1536 a~~~k~~~ 1543 (2445)
|+.+-+.+
T Consensus 80 a~~yN~~~ 87 (117)
T 2i7k_A 80 AMIYNKPE 87 (117)
T ss_dssp HHHTSCSS
T ss_pred HHHHCCCC
Confidence 99985544
No 35
>3k3v_A Protein SMY2; GYF domain, poly-proline binding, domain SWAP, ragnya, phosphoprotein, protein binding; 1.80A {Saccharomyces cerevisiae} PDB: 3fma_A
Probab=83.21 E-value=0.47 Score=48.63 Aligned_cols=49 Identities=24% Similarity=0.317 Sum_probs=43.6
Q ss_pred cCcEEEeccCCcccCchhhhhhhhhhhcCcccccchhhccCC--------CCceeee
Q 000067 640 VGKWFYLDHCGMECGPSRLCDLKTLVEEGVLVSDHFIKHLDS--------NRWETVE 688 (2445)
Q Consensus 640 ~GkWfyld~~G~e~gp~~l~~lk~l~~~g~l~~dh~ikh~d~--------~rw~t~e 688 (2445)
.-.|+|+|..|..|||=--.++..-.+.||+-.|-.|+..+. ++|+|+.
T Consensus 15 e~~W~Y~Dp~G~vQGPFs~~~M~~W~~~GYF~~~L~VrR~~~~~~p~g~d~~F~~Lg 71 (100)
T 3k3v_A 15 ESSWRYIDTQGQIHGPFTTQMMSQWYIGGYFASTLQISRLGSTPETLGINDIFITLG 71 (100)
T ss_dssp CCEEEEECTTSCEEEEEEHHHHHHHHHTTCCCTTCEEEECCSSCCSSSCBTCCEEHH
T ss_pred cceEEEECCCCCCcCCcCHHHHHHHHHcCCCCCCceEEEcCCCCCccCCCCceeeHH
Confidence 358999999999999999999999999999999999998743 4888854
No 36
>1wh2_A Hypothetical protein AT5G08430; GYF domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} SCOP: d.76.1.1
Probab=81.84 E-value=0.53 Score=46.20 Aligned_cols=46 Identities=22% Similarity=0.351 Sum_probs=41.2
Q ss_pred ccccCcEEEeccCCcccCchhhhhhhhhhhcCcccccchhhccCCC
Q 000067 637 DSSVGKWFYLDHCGMECGPSRLCDLKTLVEEGVLVSDHFIKHLDSN 682 (2445)
Q Consensus 637 ds~~GkWfyld~~G~e~gp~~l~~lk~l~~~g~l~~dh~ikh~d~~ 682 (2445)
+...-.|+|+|..|..|||=...+|+.-.+.||+..|-+|...+..
T Consensus 14 ~~~~~~W~Y~Dp~g~iQGPFs~~~M~~W~~~GyF~~~L~Vrr~~~~ 59 (78)
T 1wh2_A 14 DKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVWMTGES 59 (78)
T ss_dssp CSSSCCEEEECTTSCEEEEECHHHHHHHHTTTSSCSCCEEEETTSC
T ss_pred CcccCeEEEECCCCCCcCCcCHHHHHHHHHcCCCCCCceEEEeCCC
Confidence 3444689999999999999999999999999999999999988744
No 37
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=81.54 E-value=1.1 Score=49.38 Aligned_cols=68 Identities=12% Similarity=0.184 Sum_probs=51.1
Q ss_pred ceeeeccCCCCCchhHHHHHHHhhh-cccccceeeecccccCChhHHHHHHHhCCCcceEeeccccccccc
Q 000067 1298 SRQVDLSSVGPNCTDSLIRKTLNAF-DKEKLNSILLVGCTNITSGMLEEILQSFPHLSSIDIRGCGQFGEL 1367 (2445)
Q Consensus 1298 ~~~~~~ss~g~~ctd~~~~~~~~~y-~~~~~~~~~l~gc~~~~~~~l~~~l~~~p~~~~~~i~gc~q~~~l 1367 (2445)
-+.++|+.- ..=||.-+..|-..- -...+..+=|.+|++||..-|..+ ..+|.|.+++|++|.+..+.
T Consensus 87 L~~L~L~~C-~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L-~~~~~L~~L~L~~c~~Itd~ 155 (176)
T 3e4g_A 87 VEKIRLCKC-HYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIAL-HHFRNLKYLFLSDLPGVKEK 155 (176)
T ss_dssp CCEEEEESC-TTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHG-GGCTTCCEEEEESCTTCCCH
T ss_pred CCEEEeCCC-CccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHH-hcCCCCCEEECCCCCCCCch
Confidence 345666532 233788888887642 234789999999999999999765 57999999999999987763
No 38
>3dai_A ATPase family AAA domain-containing protein 2; ancca, AAA+ nuclear coregulator cancer-associated Pro2000 protein, two AAA DOMA containing protein; 1.95A {Homo sapiens} PDB: 3lxj_A
Probab=81.46 E-value=3 Score=43.44 Aligned_cols=85 Identities=14% Similarity=0.276 Sum_probs=64.8
Q ss_pred hcchhhHHHHHHHHHHHHHHHHhcccccccchh------------------HHHHhhhccccccccCCcchhhhHHHHHH
Q 000067 1473 KSENGYKRMEEFLASSLKEIMRVNTFEFFVPKV------------------AEIEGRMKKGYYISHGLGSVKDDISRMCR 1534 (2445)
Q Consensus 1473 ~~e~~y~~~e~f~~~~l~~im~~~~~dff~~kv------------------~~ie~~~k~gyy~~~g~~~~k~di~~mcr 1534 (2445)
..|.-.+.+-.+|..-|..||+...+..|.--| ..|+.|+++|+|. .+..+..|+..|+.
T Consensus 3 ~ee~~l~~l~~~l~~il~~l~~~~~~~~F~~pv~~~~~pdY~~iI~~PmdL~tI~~kl~~~~Y~--~~~~f~~D~~li~~ 80 (130)
T 3dai_A 3 QEEDTFRELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYL--TVKDYLRDIDLICS 80 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSGGGGGGSSCCCTTTCTTHHHHCSSCCCHHHHHHHHHTTCCS--SHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCccHhhcCCCChhhcCCHHHHcCCCCCHHHHHHHHhCCCCC--CHHHHHHHHHHHHH
Confidence 356778889999999999999988888885323 6799999999995 46788999999999
Q ss_pred HHHHhccCCCCCCccchhhHHHHHHHHhhcc
Q 000067 1535 DAIKAKNRGSAGDMNRITTLFIQLATRLEQG 1565 (2445)
Q Consensus 1535 da~~~k~~~~~~~~~~i~~~~~~~~~~~~~~ 1565 (2445)
.|+.+-..++ -+...|...|..|+.
T Consensus 81 Na~~yN~~~s------~~~~~i~~~A~~L~~ 105 (130)
T 3dai_A 81 NALEYNPDRD------PGDRLIRHRACALRD 105 (130)
T ss_dssp HHHHHCCSSS------HHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCC------hhHHHHHHHHHHHHH
Confidence 9999855443 223344566666654
No 39
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=78.73 E-value=0.92 Score=49.89 Aligned_cols=64 Identities=19% Similarity=0.289 Sum_probs=52.2
Q ss_pred ceeeeccCCCCCchhHHHHHHHhhhcccccceeeecccccCChhHHHHHHHh---CCCcceEeecccccccc
Q 000067 1298 SRQVDLSSVGPNCTDSLIRKTLNAFDKEKLNSILLVGCTNITSGMLEEILQS---FPHLSSIDIRGCGQFGE 1366 (2445)
Q Consensus 1298 ~~~~~~ss~g~~ctd~~~~~~~~~y~~~~~~~~~l~gc~~~~~~~l~~~l~~---~p~~~~~~i~gc~q~~~ 1366 (2445)
...+|||.-. =||.-+..|. .-.+++.+-|.+|.+||...|..|-.. .|.|.++||.+|.+..|
T Consensus 63 L~~LDLs~~~--Itd~GL~~L~---~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD 129 (176)
T 3e4g_A 63 IQAIDATDSC--IMSIGFDHME---GLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTD 129 (176)
T ss_dssp EEEEEEESCC--CCGGGGGGGT---TCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCH
T ss_pred EeEEeCcCCC--ccHHHHHHhc---CCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCH
Confidence 4678888543 6777666652 467899999999999999999998873 57999999999998766
No 40
>3d7c_A General control of amino acid synthesis protein 5; GCN5, bromodomain, structural genomics consortium, SGC, HOST-virus interaction, nucleus; 2.06A {Homo sapiens} SCOP: a.29.2.1 PDB: 1f68_A 1jm4_B* 1n72_A 1wug_A* 1wum_A* 1zs5_A* 2rnw_A* 2rnx_A* 3gg3_A
Probab=78.16 E-value=4.1 Score=41.33 Aligned_cols=74 Identities=15% Similarity=0.151 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHhcccccccchh------------------HHHHhhhccccccccCCcchhhhHHHHHHHHHHhcc
Q 000067 1480 RMEEFLASSLKEIMRVNTFEFFVPKV------------------AEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKN 1541 (2445)
Q Consensus 1480 ~~e~f~~~~l~~im~~~~~dff~~kv------------------~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~ 1541 (2445)
.+...+..-|..||+......|.--| ..|+.|+++|+|.+ ...+..||..|+..|+.+-.
T Consensus 7 ~l~~~~~~il~~l~~~~~~~~F~~pvd~~~~pdY~~iIk~PmdL~tI~~kl~~~~Y~s--~~~f~~Dv~li~~Na~~yN~ 84 (112)
T 3d7c_A 7 QLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVT--RKLFVADLQRVIANCREYNP 84 (112)
T ss_dssp HHHHHHHHHHHHHHHSGGGGGGSSCCCTTTSTTHHHHCSSCCCHHHHHHHHHTTCCCS--HHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHcCCCchhhcCCCCcccccCHHHHccCCcCHHHHHHHHcCCCCcC--HHHHHHHHHHHHHHHHHHCC
Confidence 34456667778888877777665433 56899999999976 57899999999999999855
Q ss_pred CCCCCCccchhhHHHHHHHHhhcc
Q 000067 1542 RGSAGDMNRITTLFIQLATRLEQG 1565 (2445)
Q Consensus 1542 ~~~~~~~~~i~~~~~~~~~~~~~~ 1565 (2445)
.+. .|.++|..|+.
T Consensus 85 ~~s----------~~~~~A~~L~~ 98 (112)
T 3d7c_A 85 PDS----------EYCRCASALEK 98 (112)
T ss_dssp TTS----------HHHHHHHHHHH
T ss_pred CCC----------HHHHHHHHHHH
Confidence 433 23456666653
No 41
>3rcw_A Bromodomain-containing protein 1; transcription, structural genomics, structural consortium, SGC; 2.21A {Homo sapiens}
Probab=74.79 E-value=4.5 Score=42.29 Aligned_cols=66 Identities=18% Similarity=0.287 Sum_probs=53.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhcccccccchh------------------HHHHhhhccccccccCCcchhhhHHHHHHHHH
Q 000067 1476 NGYKRMEEFLASSLKEIMRVNTFEFFVPKV------------------AEIEGRMKKGYYISHGLGSVKDDISRMCRDAI 1537 (2445)
Q Consensus 1476 ~~y~~~e~f~~~~l~~im~~~~~dff~~kv------------------~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~ 1537 (2445)
-.-+.+..+|..-|..||+.....+|.--| ..|+.|+++|+|. .+..+..|+..|+..|+
T Consensus 9 ~~~~~l~~~l~~il~~l~~~~~~~~F~~pv~~~~~pdY~~iI~~PmdL~tI~~kl~~~~Y~--~~~~f~~D~~li~~Na~ 86 (135)
T 3rcw_A 9 LRLTPLTVLLRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYK--NLHEFEEDFDLIIDNCM 86 (135)
T ss_dssp CCCCHHHHHHHHHHHHHHHTCTTCSSSSCCCTTTCTTHHHHCSSCCCHHHHHHHHHTTCCS--SHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHHHHHHHhCCcchhhcCCCChhhcCCHHHHhCCCCCHHHHHHHHhcCCCC--CHHHHHHHHHHHHHHHH
Confidence 344567788999999999988888885433 5699999999995 46789999999999999
Q ss_pred HhccCC
Q 000067 1538 KAKNRG 1543 (2445)
Q Consensus 1538 ~~k~~~ 1543 (2445)
.+-..+
T Consensus 87 ~yN~~~ 92 (135)
T 3rcw_A 87 KYNARD 92 (135)
T ss_dssp HHSCTT
T ss_pred HHCCCC
Confidence 985443
No 42
>2d9e_A Peregrin; four-helix bundle, transcription activator, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.78 E-value=4 Score=42.20 Aligned_cols=64 Identities=13% Similarity=0.264 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHHHHHHHhcccccccchh------------------HHHHhhhccccccccCCcchhhhHHHHHHHHHHh
Q 000067 1478 YKRMEEFLASSLKEIMRVNTFEFFVPKV------------------AEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKA 1539 (2445)
Q Consensus 1478 y~~~e~f~~~~l~~im~~~~~dff~~kv------------------~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~ 1539 (2445)
-.-+...|..-|..||+......|.--| ..|+.|+++|+|.+ +..+..|+..|+..|+.+
T Consensus 5 ~~pl~~~l~~il~~l~~~~~~~~F~~pv~~~~~pdY~~iIk~PmdL~tI~~kl~~~~Y~s--~~ef~~D~~li~~Na~~y 82 (121)
T 2d9e_A 5 SSGFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLN--FDDFEEDFNLIVSNCLKY 82 (121)
T ss_dssp CCHHHHHHHHHHHHHHHHCSSCSSSSCCCTTTCTTHHHHCSSCCCHHHHHHHHHTTCCCS--HHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCccHhhCCcCCccccCCHHHHcCCCcCHHHHHHHHhcCCCCC--HHHHHHHHHHHHHHHHHH
Confidence 3445567788889999988777775433 56899999999975 678899999999999998
Q ss_pred ccCC
Q 000067 1540 KNRG 1543 (2445)
Q Consensus 1540 k~~~ 1543 (2445)
-..+
T Consensus 83 N~~~ 86 (121)
T 2d9e_A 83 NAKD 86 (121)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 5443
No 43
>3aad_A Transcription initiation factor TFIID subunit 1; protein-protein complex, bromodomain, transcription, transcr regulation, chromatin regulator, transcription-C complex; 3.30A {Homo sapiens}
Probab=73.58 E-value=3.2 Score=48.67 Aligned_cols=88 Identities=11% Similarity=0.191 Sum_probs=59.5
Q ss_pred cccccccchhHHhh--HhhhhhcchhhHHHHHHHHHHHHHHHHhcccccccchhH------------------HHHhhhc
Q 000067 1454 RKSSSILSRDARMR--RWSIKKSENGYKRMEEFLASSLKEIMRVNTFEFFVPKVA------------------EIEGRMK 1513 (2445)
Q Consensus 1454 r~ss~~lsrda~~r--r~~~~~~e~~y~~~e~f~~~~l~~im~~~~~dff~~kv~------------------~ie~~~k 1513 (2445)
|+++..+.-|---| +=+.+......-.+-.++...|.+||+......|.--|. .|+.|++
T Consensus 19 rr~~~~~~~d~~~~~~~~~~rr~~~p~~~l~~~~~~il~~l~~~~~a~~F~~pV~~~~~pdY~~iIk~PmDL~tIk~kl~ 98 (292)
T 3aad_A 19 RRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVR 98 (292)
T ss_dssp CCSSCSCCCCC------------CCHHHHHHHHHHHHHHHHSSSTTCGGGSSSCCTTTSTTHHHHCSSCCCHHHHHHHHH
T ss_pred CCCCCCCCCccccCCcccccccccChHHHHHHHHHHHHHHHHhCCcchhhcCCCCchhcccHHHHcCCcCCHHHHHHHhh
Confidence 34555554443211 222333344555667788888999998877777776665 7999999
Q ss_pred cccccccCCcchhhhHHHHHHHHHHhccCC
Q 000067 1514 KGYYISHGLGSVKDDISRMCRDAIKAKNRG 1543 (2445)
Q Consensus 1514 ~gyy~~~g~~~~k~di~~mcrda~~~k~~~ 1543 (2445)
+|+|.+ +..+..|+..||..|+.+-..+
T Consensus 99 ~~~Y~s--~~~f~~D~~li~~Na~~yN~~~ 126 (292)
T 3aad_A 99 KRLYPS--REEFREHLELIVKNSATYNGPK 126 (292)
T ss_dssp TTCCSS--HHHHHHHHHHHHHHHHHHTCSS
T ss_pred CCCcCC--HHHHHHHHHHHHHHHHHHcCCc
Confidence 999965 7888999999999999875443
No 44
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=72.42 E-value=5.3 Score=44.97 Aligned_cols=37 Identities=14% Similarity=0.364 Sum_probs=21.0
Q ss_pred ccceeeecccccCChhHHHHHHHhCC-CcceEeecccc
Q 000067 1326 KLNSILLVGCTNITSGMLEEILQSFP-HLSSIDIRGCG 1362 (2445)
Q Consensus 1326 ~~~~~~l~gc~~~~~~~l~~~l~~~p-~~~~~~i~gc~ 1362 (2445)
+++.+-|.+|.+|+...+..++..+| .|.+++|.||.
T Consensus 169 ~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 169 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 45555555555555555555555555 55555555553
No 45
>3nxb_A CAT eye syndrome critical region protein 2; structural genomics consortium, SGC, CECR2, CAT eye syndrome chromosome region candidate 2, bromodomain; 1.83A {Homo sapiens} SCOP: a.29.2.0
Probab=71.64 E-value=6.1 Score=40.29 Aligned_cols=59 Identities=15% Similarity=0.233 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhcccccccc------------------hhHHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCC
Q 000067 1483 EFLASSLKEIMRVNTFEFFVP------------------KVAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRG 1543 (2445)
Q Consensus 1483 ~f~~~~l~~im~~~~~dff~~------------------kv~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~ 1543 (2445)
..|..-|..||+.-....|.- =+..|+.|+++|+|. .+..+..|+..|+..|..+-..+
T Consensus 19 ~~~~~il~~l~~~~~s~~F~~pv~~~~~pdY~~~I~~Pmdl~tI~~kl~~~~Y~--~~~~f~~D~~li~~Na~~yN~~~ 95 (116)
T 3nxb_A 19 TAMYKVLDVVKAHKDSWPFLEPVDESYAPNYYQIIKAPMDISSMEKKLNGGLYC--TKEEFVNDMKTMFRNCRKYNGES 95 (116)
T ss_dssp HHHHHHHHHHHHSTTCGGGSSCCCTTTSTTHHHHCSSCCCHHHHHHHHHTTCCS--SHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCCcHhhcCcCChhhccChHHHcCCCCCHHHHHHHHcCCCCC--CHHHHHHHHHHHHHHHHHHCCCC
Confidence 555667778888766666632 136799999999995 56789999999999999985444
No 46
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=71.50 E-value=1.3 Score=51.28 Aligned_cols=37 Identities=14% Similarity=0.252 Sum_probs=32.7
Q ss_pred ccccccchHHHHHHHHHhhhhhhhHHhhcchhhHHHHHh
Q 000067 1254 GWGLLDGHTLAHVFHFLRSDMKSLAFASLTCRHWRAAVR 1292 (2445)
Q Consensus 1254 ~w~ll~g~~lar~fh~lr~d~ksl~~~~~tc~~w~~a~~ 1292 (2445)
-+..|--.+|.+||.|| |.++|+.++.+||.|+..+.
T Consensus 14 ~~~~lp~~~~~~i~~~l--~~~~l~~~~~v~~~w~~~~~ 50 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYL--QFEDIINSLGVSQNWNKIIR 50 (464)
T ss_dssp HHHHSCHHHHHHHHTTS--CHHHHHHHHTTCHHHHHHHT
T ss_pred ChHHCCHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHc
Confidence 35568889999999999 99999999999999998764
No 47
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=69.87 E-value=6 Score=42.59 Aligned_cols=71 Identities=18% Similarity=0.220 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhcccccccchh------------------HHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCCC
Q 000067 1483 EFLASSLKEIMRVNTFEFFVPKV------------------AEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRGS 1544 (2445)
Q Consensus 1483 ~f~~~~l~~im~~~~~dff~~kv------------------~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~~ 1544 (2445)
+.|..-|+.||+......|.-.| ..|+.||++|+|.+ +..+..||..|+..|+.+-..+.
T Consensus 75 ~~l~~il~~l~~~~~~~~F~~pv~~~~~pdY~~~I~~PmdL~tI~~kl~~~~Y~s--~~~f~~D~~li~~Na~~yN~~~s 152 (174)
T 2ri7_A 75 EGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEK--LTEFVADMTKIFDNCRYYNPSDS 152 (174)
T ss_dssp HHHHHHHHHHHTSGGGTTTSSCCCTTTCHHHHHHCSSCCCHHHHHHHHHTTCCCB--HHHHHHHHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHHHHhhhhhhhhhcCCCcccCCchHHHhCCcCCHHHHHHHHHcCCCCC--HHHHHHHHHHHHHHHHHHCCCCC
Confidence 34556677788776666664333 56899999999975 67889999999999999854442
Q ss_pred CCCccchhhHHHHHHHHhhcc
Q 000067 1545 AGDMNRITTLFIQLATRLEQG 1565 (2445)
Q Consensus 1545 ~~~~~~i~~~~~~~~~~~~~~ 1565 (2445)
.|.++|..|+.
T Consensus 153 ----------~~~~~A~~L~~ 163 (174)
T 2ri7_A 153 ----------PFYQCAEVLES 163 (174)
T ss_dssp ----------HHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHH
Confidence 23566666653
No 48
>2oss_A HUNK1 protein, bromodomain-containing protein 4; BRD4, structural genomics consortium, SGC, signaling protein; 1.35A {Homo sapiens} PDB: 2yel_A* 3mxf_A* 3p5o_A* 3svf_A* 3svg_A* 3u5j_A* 3u5k_A* 3u5l_A* 3uvw_A* 3uvx_A* 3uvy_A* 3uw9_A* 3zyu_A* 4a9l_A* 4e96_A* 3jvj_A 3jvk_A* 3muk_A* 3mul_A* 2nxb_A ...
Probab=69.40 E-value=7.1 Score=40.70 Aligned_cols=74 Identities=18% Similarity=0.230 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHhcccccccch--------------------hHHHHhhhccccccccCCcchhhhHHHHHHHHHHh
Q 000067 1480 RMEEFLASSLKEIMRVNTFEFFVPK--------------------VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKA 1539 (2445)
Q Consensus 1480 ~~e~f~~~~l~~im~~~~~dff~~k--------------------v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~ 1539 (2445)
.+..++..-|.+||+......|.-- ...|+.|+++|+|.+ +..+..|+..|+..|+.+
T Consensus 21 ~l~~~~~~il~~L~~~~~a~~F~~PVd~~~~~~pdY~~iIk~PmdL~tI~~kl~~~~Y~s--~~ef~~D~~li~~Na~~y 98 (127)
T 2oss_A 21 QLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN--AQECIQDFNTMFTNCYIY 98 (127)
T ss_dssp HHHHHHHTHHHHHHTSTTCGGGSSCCCTTTTTCTTHHHHCSSCCCHHHHHHHHHTTCCSS--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccchhhcCCCChhhccCccHHHHcCCCCCHHHHHHHHHcCCCCC--HHHHHHHHHHHHHHHHHH
Confidence 3445555667888887766666422 367999999999964 678999999999999998
Q ss_pred ccCCCCCCccchhhHHHHHHHHhhcc
Q 000067 1540 KNRGSAGDMNRITTLFIQLATRLEQG 1565 (2445)
Q Consensus 1540 k~~~~~~~~~~i~~~~~~~~~~~~~~ 1565 (2445)
-..+. .|.++|..|+.
T Consensus 99 N~~~s----------~i~~~A~~L~~ 114 (127)
T 2oss_A 99 NKPGD----------DIVLMAEALEK 114 (127)
T ss_dssp SCTTC----------HHHHHHHHHHH
T ss_pred CCCCC----------HHHHHHHHHHH
Confidence 55433 23456666643
No 49
>1e6i_A Transcriptional activator GCN5; gene regulation, bromodomain, histone binding, N-acetyl lysine; HET: ALY; 1.87A {Saccharomyces cerevisiae} SCOP: a.29.2.1
Probab=68.35 E-value=7.9 Score=40.00 Aligned_cols=71 Identities=10% Similarity=0.048 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHhcccccccchh------------------HHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCCC
Q 000067 1483 EFLASSLKEIMRVNTFEFFVPKV------------------AEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRGS 1544 (2445)
Q Consensus 1483 ~f~~~~l~~im~~~~~dff~~kv------------------~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~~ 1544 (2445)
.++..-|.+||+......|.--| ..|+.|+++|+|.+ +..+..|+..|+..|+.+-+.+.
T Consensus 16 ~~~~~il~~l~~~~~a~~F~~pvd~~~~pdY~~iIk~PmdL~tI~~kl~~~~Y~s--~~~f~~D~~li~~Na~~yN~~~s 93 (121)
T 1e6i_A 16 AAIQNILTELQNHAAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQK--MEDFIYDARLVFNNCRMYNGENT 93 (121)
T ss_dssp HHHHHHHHHHHHSTTCGGGSSCCCTTTSTTHHHHCSSCCCHHHHHHHHHTTCCSS--HHHHHHHHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHHHHcCCCchhhCCCCChhhCcCHHHHcCCCCCHHHHHHHHhcCCCCC--HHHHHHHHHHHHHHHHHHCCCCC
Confidence 45667778888877777664333 57899999999965 67899999999999999855443
Q ss_pred CCCccchhhHHHHHHHHhhcc
Q 000067 1545 AGDMNRITTLFIQLATRLEQG 1565 (2445)
Q Consensus 1545 ~~~~~~i~~~~~~~~~~~~~~ 1565 (2445)
.|.+.|..|+.
T Consensus 94 ----------~i~~~A~~L~~ 104 (121)
T 1e6i_A 94 ----------SYYKYANRLEK 104 (121)
T ss_dssp ----------HHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHH
Confidence 23456666653
No 50
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=68.00 E-value=1.9 Score=50.12 Aligned_cols=30 Identities=33% Similarity=0.710 Sum_probs=27.5
Q ss_pred hHHHHHHHHHhhhhhhhHHhhcchhhHHHHHh
Q 000067 1261 HTLAHVFHFLRSDMKSLAFASLTCRHWRAAVR 1292 (2445)
Q Consensus 1261 ~~lar~fh~lr~d~ksl~~~~~tc~~w~~a~~ 1292 (2445)
|+|.+||.|| |.++|+-++++||+|+..+.
T Consensus 21 ~~~~~i~~~l--~~~~l~~~~~v~~~w~~~~~ 50 (435)
T 1p22_A 21 HIAENILSYL--DAKSLCAAELVCKEWYRVTS 50 (435)
T ss_dssp HHHHHHHTTC--CHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHhcC--CHHHHHHHHHHHHHHHHHhc
Confidence 5999999999 78999999999999998864
No 51
>3hme_A Bromodomain-containing protein 9; BRD9, bromodomain containing 9 isoform 1, LAVS3040, rhabdomyosarcoma antigen MU-RMS-40.8; 2.23A {Homo sapiens}
Probab=67.42 E-value=7.4 Score=40.29 Aligned_cols=75 Identities=16% Similarity=0.297 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHhcccccccchh------------------HHHHhhhccccccccCCcchhhhHHHHHHHHHHhc
Q 000067 1479 KRMEEFLASSLKEIMRVNTFEFFVPKV------------------AEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAK 1540 (2445)
Q Consensus 1479 ~~~e~f~~~~l~~im~~~~~dff~~kv------------------~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k 1540 (2445)
..+.+++..-|+.||+.-...+|.--| ..|+.|+++|+|. .+..+..|+..|+..|+.+-
T Consensus 12 ~p~~~~l~~il~~l~~~~~~~~F~~pv~~~~~pdY~~iIk~PmdL~tI~~kl~~~~Y~--~~~~f~~D~~li~~Na~~yN 89 (123)
T 3hme_A 12 TPIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYK--SVTEFKADFKLMCDNAMTYN 89 (123)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCSSSSCCCTTTSTTHHHHCSSCCCHHHHHHHHHTTCCC--SHHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHhCCccHhhcCCCChhhccCHHHHCCCCCCHHHHHHHhccCCCC--CHHHHHHHHHHHHHHHHHHC
Confidence 345678888889999987777775323 5789999999995 46788999999999999985
Q ss_pred cCCCCCCccchhhHHHHHHHHhhcc
Q 000067 1541 NRGSAGDMNRITTLFIQLATRLEQG 1565 (2445)
Q Consensus 1541 ~~~~~~~~~~i~~~~~~~~~~~~~~ 1565 (2445)
+.+. .|.+.|..|+.
T Consensus 90 ~~~s----------~~~~~A~~L~~ 104 (123)
T 3hme_A 90 RPDT----------VYYKLAKKILH 104 (123)
T ss_dssp CTTS----------HHHHHHHHHHH
T ss_pred CCCC----------HHHHHHHHHHH
Confidence 4433 23566666654
No 52
>3ljw_A Protein polybromo-1; alpha helix, alternative splicing, bromodomain, chromatin RE DNA-binding, nucleus, phosphoprotein, transcription; 1.50A {Homo sapiens} PDB: 2ktb_B* 3hmf_A
Probab=64.88 E-value=12 Score=38.49 Aligned_cols=67 Identities=22% Similarity=0.363 Sum_probs=49.3
Q ss_pred chhhHHHHHHHHHHHHHHHHhcc------cccccch------------------hHHHHhhhccccccccCCcchhhhHH
Q 000067 1475 ENGYKRMEEFLASSLKEIMRVNT------FEFFVPK------------------VAEIEGRMKKGYYISHGLGSVKDDIS 1530 (2445)
Q Consensus 1475 e~~y~~~e~f~~~~l~~im~~~~------~dff~~k------------------v~~ie~~~k~gyy~~~g~~~~k~di~ 1530 (2445)
|++=..|.+.|..-|..||+.-. ...|.-- +..|+.|+++|+|.+ +..+..|+.
T Consensus 3 ~~~p~~l~~~~~~ll~~l~~~~d~~g~~~s~~F~~~~~~~~~pdY~~iIk~PmdL~tI~~kl~~~~Y~s--~~~f~~D~~ 80 (120)
T 3ljw_A 3 GSSPAYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKS--IHAMAKDID 80 (120)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCBCTTSCBTTGGGSSCCCTTTCHHHHHHCSSCCCHHHHHHHHHHTCCCS--HHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhccCcCCCcccHHhcCCCCcccCCChHHHcCCCCCHHHHHHHHccCCCCC--HHHHHHHHH
Confidence 44455666777777788877543 5555311 367999999999954 778999999
Q ss_pred HHHHHHHHhccCC
Q 000067 1531 RMCRDAIKAKNRG 1543 (2445)
Q Consensus 1531 ~mcrda~~~k~~~ 1543 (2445)
.||..|..+-..+
T Consensus 81 li~~Na~~yN~~~ 93 (120)
T 3ljw_A 81 LLAKNAKTYNEPG 93 (120)
T ss_dssp HHHHHHHHHSCTT
T ss_pred HHHHHHHHHCCCC
Confidence 9999999985443
No 53
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=63.20 E-value=2.6 Score=50.37 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=32.9
Q ss_pred CccccccchHHHHHHHHHhhhhhhhHHhhcchhhHHHHHh
Q 000067 1253 GGWGLLDGHTLAHVFHFLRSDMKSLAFASLTCRHWRAAVR 1292 (2445)
Q Consensus 1253 ~~w~ll~g~~lar~fh~lr~d~ksl~~~~~tc~~w~~a~~ 1292 (2445)
|+|..|--.++.+||+||- -|.|.-++.|||+||..++
T Consensus 3 ~~l~~LP~ei~l~IlsfL~--p~DL~~l~~vcr~Wr~la~ 40 (312)
T 3l2o_B 3 STLTRLPIDVQLYILSFLS--PHDLCQLGSTNHYWNETVR 40 (312)
T ss_dssp CHHHHSCHHHHHHHHHTSC--HHHHHHHHTTCHHHHHHHT
T ss_pred chhHhCCHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhc
Confidence 5677888899999999994 4669999999999999875
No 54
>1syx_B CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2, CD; GYF-domain, thioredoxin-like, spliceosomal proteins, transla immune system complex; 2.35A {Homo sapiens} SCOP: d.76.1.1 PDB: 1gyf_A 1l2z_A
Probab=62.93 E-value=4.5 Score=40.65 Aligned_cols=48 Identities=23% Similarity=0.361 Sum_probs=40.5
Q ss_pred ceEEe---cCCCCccCCCcHHHHHHHHhhcccccCcccccccC---ceeeecccc
Q 000067 1045 EWYYL---DGAGHERGPSSFSELQVLVDQGCIQKHTSVFRKFD---KVWVPLTFA 1093 (2445)
Q Consensus 1045 dWyYl---Dg~G~E~GP~sfseLQ~lv~~g~i~~~sSvfRK~D---~~WvPv~~~ 1093 (2445)
-|.|. |..|.-+||||=+++|...++|....+ -.+||.. .-|.||..+
T Consensus 27 ~WeYKW~~~~~~~i~GPfs~~eM~~W~~~GYF~~~-v~vRrvg~~~~~Fy~~~rI 80 (86)
T 1syx_B 27 MWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDG-VYCRKLDPPGGQFYNSKRI 80 (86)
T ss_dssp EEEEESSSSSSSCCEEEEEHHHHHHHHHTTSCTTC-CEEEESSSTTCCCEEGGGC
T ss_pred eEEEEecCCCCCcccCCcCHHHHHHHHHCCCcCCC-eEEEEecCCCCceEEeeee
Confidence 59999 777899999999999999999999975 4566654 789998765
No 55
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=61.72 E-value=3.9 Score=48.41 Aligned_cols=39 Identities=23% Similarity=0.284 Sum_probs=34.1
Q ss_pred cCccccccchHHHHHHHHHhhhhhhhH-HhhcchhhHHHHHh
Q 000067 1252 SGGWGLLDGHTLAHVFHFLRSDMKSLA-FASLTCRHWRAAVR 1292 (2445)
Q Consensus 1252 ~~~w~ll~g~~lar~fh~lr~d~ksl~-~~~~tc~~w~~a~~ 1292 (2445)
......|--.+|..||.+| +.++|+ -++++||.|++.+.
T Consensus 48 ~~~~~~LP~ell~~Il~~L--p~~~L~~r~~~VCk~Wr~l~~ 87 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAEL--PATELVQACRLVCLRWKELVD 87 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTS--CHHHHHHTGGGTCHHHHHHHT
T ss_pred ccChhhCCHHHHHHHHHcC--CHHHHHHHHHHHhHHHHHHhc
Confidence 4466779999999999998 779999 99999999999874
No 56
>2dkw_A Hypothetical protein KIAA1240; bromodomain-like, five-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.88 E-value=20 Score=37.70 Aligned_cols=68 Identities=18% Similarity=0.375 Sum_probs=55.8
Q ss_pred chhhHHHHHHHHHHHHHHHHhccccccc---c----------hhHHHHhhhccccccccCCcchhhhHHHHHHHHHHhcc
Q 000067 1475 ENGYKRMEEFLASSLKEIMRVNTFEFFV---P----------KVAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKN 1541 (2445)
Q Consensus 1475 e~~y~~~e~f~~~~l~~im~~~~~dff~---~----------kv~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~ 1541 (2445)
++-++.+..||..-|..||+.-.+..|. | =...|+.|+++|+|.+ +..+..|+..|+..|+.+-.
T Consensus 7 ~~~~~~L~~~~~~il~~l~~~~~~~~F~~P~pdY~~iIk~PmDL~tI~~kl~~~~Y~s--~~~f~~D~~Li~~Na~~yN~ 84 (131)
T 2dkw_A 7 GNTLRELRLFLRDVTKRLATDKRFNIFSKPVSDYLEVIKEPMDLSTVITKIDKHNYLT--AKDFLKDIDLICSNALEYNP 84 (131)
T ss_dssp THHHHHHHHHHHHHHHHHHHSGGGCTTSSCCSSCTTSCSSCCCHHHHHHHHHTTCCCS--SHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCccchhhcCcCccHHhHcCCCcCHHHHHHHHcCCCCCC--HHHHHHHHHHHHHHHHHHCC
Confidence 4556778889999999999988887775 3 2478999999999975 78899999999999999855
Q ss_pred CCC
Q 000067 1542 RGS 1544 (2445)
Q Consensus 1542 ~~~ 1544 (2445)
.++
T Consensus 85 ~~s 87 (131)
T 2dkw_A 85 DKD 87 (131)
T ss_dssp CSS
T ss_pred CCC
Confidence 444
No 57
>3fkm_X Signaling protein; bromodomain, malaria, structural genomics, structural genomi consortium, SGC; 2.50A {Plasmodium falciparum 3D7}
Probab=58.16 E-value=13 Score=40.47 Aligned_cols=74 Identities=11% Similarity=0.127 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHhcccccccch--------------------hHHHHhhhccccccccCCcchhhhHHHHHHHHHHh
Q 000067 1480 RMEEFLASSLKEIMRVNTFEFFVPK--------------------VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKA 1539 (2445)
Q Consensus 1480 ~~e~f~~~~l~~im~~~~~dff~~k--------------------v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~ 1539 (2445)
.+...+..-|..||+.....+|.-- +..|+.||++|+|.+ +..+..||..|+..|+.+
T Consensus 21 ~~~~~~~~il~~L~~~~~s~~F~~PVd~~~~~~pdY~~iIk~PmDL~tI~~kL~~~~Y~s--~~ef~~Dv~Lif~Na~~y 98 (166)
T 3fkm_X 21 QWYLLANQLILSLSKYEGGHIFEKLVDAKKQNCPDYYDVIKNPMSFSCIKTKLKKGQYAY--PSEFVKDVQLIFDNCSLY 98 (166)
T ss_dssp HHHHHHHHHHHHHTTSTTGGGGSSCCC-----CCCGGGCCSSCCCHHHHHHHHHHTCCCS--HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCCCChhhccCCCHHHhcCCCCCHHHHHHHHcCCCCCC--HHHHHHHHHHHHHHHHHH
Confidence 3446677778888886666666422 257899999999985 788999999999999997
Q ss_pred ccCCCCCCccchhhHHHHHHHHhhcc
Q 000067 1540 KNRGSAGDMNRITTLFIQLATRLEQG 1565 (2445)
Q Consensus 1540 k~~~~~~~~~~i~~~~~~~~~~~~~~ 1565 (2445)
-..+. .|.++|..|+.
T Consensus 99 N~~~s----------~i~~~A~~L~~ 114 (166)
T 3fkm_X 99 NTSNS----------VVAITGKNIET 114 (166)
T ss_dssp SCTTS----------HHHHHHHHHHH
T ss_pred CCCCC----------HHHHHHHHHHH
Confidence 44333 23566666654
No 58
>4alg_A Bromodomain-containing protein 2; signaling protein, inhibitor, histone, epigenetic reader; HET: 1GH; 1.60A {Homo sapiens} PDB: 4a9e_A 4a9h_A* 4a9i_A* 4a9j_A* 4a9m_A* 4a9n_A* 4a9o_A* 4a9p_A* 4a9f_A* 4alh_A* 4akn_A* 2yek_A* 2ydw_A* 2yw5_A
Probab=57.70 E-value=14 Score=39.81 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHhcccccccc----h----------------hHHHHhhhccccccccCCcchhhhHHHHHHHHHHh
Q 000067 1480 RMEEFLASSLKEIMRVNTFEFFVP----K----------------VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKA 1539 (2445)
Q Consensus 1480 ~~e~f~~~~l~~im~~~~~dff~~----k----------------v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~ 1539 (2445)
.+..++..-|+.||+......|.- + +..|+.||++|+|. -+..+..||..|+..|+.+
T Consensus 32 ~l~~~~~~il~~l~~~~~a~~F~~PVd~~~~~~PdY~~iIk~PMDL~tI~~kl~~~~Y~--s~~ef~~Dv~Lif~Na~~Y 109 (154)
T 4alg_A 32 QLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYW--AASECMQDFNTMFTNCYIY 109 (154)
T ss_dssp HHHHHHHTHHHHHHTSTTCGGGSSCCCTTTTTCTTHHHHCSSCCCHHHHHHHHHTTCCS--SHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCchhhcCCCChhhccCCCHHHHcCCCCCHHHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHH
Confidence 344555556777777655555531 1 36799999999996 4678899999999999998
Q ss_pred ccCCCCCCccchhhHHHHHHHHhhcc
Q 000067 1540 KNRGSAGDMNRITTLFIQLATRLEQG 1565 (2445)
Q Consensus 1540 k~~~~~~~~~~i~~~~~~~~~~~~~~ 1565 (2445)
-..+. .|.++|..|+.
T Consensus 110 N~~~s----------~i~~~A~~L~~ 125 (154)
T 4alg_A 110 NKPTD----------DIVLMAQTLEK 125 (154)
T ss_dssp SCTTS----------HHHHHHHHHHH
T ss_pred CCCCC----------HHHHHHHHHHH
Confidence 44332 24567777764
No 59
>2dat_A Possible global transcription activator SNF2L2; bromodomain, all alpha protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.37 E-value=21 Score=36.85 Aligned_cols=47 Identities=28% Similarity=0.417 Sum_probs=36.7
Q ss_pred HHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCCCCCCccchhhHHHHHHHHhhc
Q 000067 1506 AEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRGSAGDMNRITTLFIQLATRLEQ 1564 (2445)
Q Consensus 1506 ~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~~~~~~~~i~~~~~~~~~~~~~ 1564 (2445)
..|+.|+++|+|.+ +..+..|+..|+..|+.+-..+. .|.+.|..|+
T Consensus 63 ~tI~~kl~~~~Y~s--~~~f~~D~~li~~Na~~yN~~~s----------~i~~~A~~L~ 109 (123)
T 2dat_A 63 KKIKERIRNHKYRS--LGDLEKDVMLLCHNAQTFNLEGS----------QIYEDSIVLQ 109 (123)
T ss_dssp HHHHHHHTTTCCCS--HHHHHHHHHHHHHHHHHHSCTTS----------HHHHHHHHHH
T ss_pred HHHHHHHhCCCCCC--HHHHHHHHHHHHHHHHHHCCCCC----------HHHHHHHHHH
Confidence 57999999999965 67899999999999999855443 2355666665
No 60
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=56.67 E-value=18 Score=44.02 Aligned_cols=76 Identities=20% Similarity=0.323 Sum_probs=50.1
Q ss_pred ceeeeccCCCCCchhHHHHHHHhhhcccccceeeecccccCChhHHHHHHHhCCCcceEeecccccccc-----ccccCC
Q 000067 1298 SRQVDLSSVGPNCTDSLIRKTLNAFDKEKLNSILLVGCTNITSGMLEEILQSFPHLSSIDIRGCGQFGE-----LALKFP 1372 (2445)
Q Consensus 1298 ~~~~~~ss~g~~ctd~~~~~~~~~y~~~~~~~~~l~gc~~~~~~~l~~~l~~~p~~~~~~i~gc~q~~~-----l~~~f~ 1372 (2445)
-+.++|+.-+ -||..+..++.+. .+++.+-|.+|. |+...+..++..+|.|.+++|.||. +.+ |+..+|
T Consensus 465 L~~L~L~~n~--l~~~~~~~~~~~~--~~L~~L~l~~n~-l~~~~~~~~~~~l~~L~~L~ls~n~-it~~~~~~l~~~~p 538 (592)
T 3ogk_B 465 VRWMLLGYVG--ESDEGLMEFSRGC--PNLQKLEMRGCC-FSERAIAAAVTKLPSLRYLWVQGYR-ASMTGQDLMQMARP 538 (592)
T ss_dssp CCEEEECSCC--SSHHHHHHHHTCC--TTCCEEEEESCC-CBHHHHHHHHHHCSSCCEEEEESCB-CCTTCTTGGGGCCT
T ss_pred ceEeeccCCC--CCHHHHHHHHhcC--cccCeeeccCCC-CcHHHHHHHHHhcCccCeeECcCCc-CCHHHHHHHHHhCC
Confidence 4667776433 4565566665544 567888888887 7777777888888888888888886 433 444444
Q ss_pred --ccceeec
Q 000067 1373 --NINWVKS 1379 (2445)
Q Consensus 1373 --~~~w~~~ 1379 (2445)
+|.+|..
T Consensus 539 ~l~~~~~~~ 547 (592)
T 3ogk_B 539 YWNIELIPS 547 (592)
T ss_dssp TEEEEEECC
T ss_pred CcEEEEecC
Confidence 4445543
No 61
>3mb3_A PH-interacting protein; PHIP, pleckstrin homology domain interacting protein, DCAF14 DDB1 and CUL4 associated factor 14, SGC; 2.25A {Homo sapiens}
Probab=52.43 E-value=23 Score=37.04 Aligned_cols=60 Identities=15% Similarity=0.153 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHhcccccccchh------------------HHHHhhhccccccccCCcchhhhHHHHHHHHHHhcc
Q 000067 1480 RMEEFLASSLKEIMRVNTFEFFVPKV------------------AEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKN 1541 (2445)
Q Consensus 1480 ~~e~f~~~~l~~im~~~~~dff~~kv------------------~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~ 1541 (2445)
.+...+..-|..||+.-....|.--| ..|+.|+++|+|. .+..+..|+..|+..|+.+-.
T Consensus 21 ~l~~~~~~il~~l~~~~~s~~F~~pv~~~~~pdY~~iI~~Pmdl~tI~~kl~~~~Y~--~~~~f~~D~~li~~Na~~yN~ 98 (135)
T 3mb3_A 21 AWKKQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYE--SPMELCKDVRLIFSNSKAYTP 98 (135)
T ss_dssp THHHHHHHHHHHHHHSGGGGGGSSCCCTTTSTTHHHHCSSCCCHHHHHHHHHTTCCS--SHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCCCChhhCCCHHHHhCCCcCHHHHHHHHhCCCCC--CHHHHHHHHHHHHHHHHHHCC
Confidence 34566777888888877777775322 5699999999997 467899999999999999844
No 62
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=51.21 E-value=6 Score=45.87 Aligned_cols=36 Identities=36% Similarity=0.463 Sum_probs=32.4
Q ss_pred ccccccchHHHHHHHHHhhhhhhhHHhhcchhhHHHHH
Q 000067 1254 GWGLLDGHTLAHVFHFLRSDMKSLAFASLTCRHWRAAV 1291 (2445)
Q Consensus 1254 ~w~ll~g~~lar~fh~lr~d~ksl~~~~~tc~~w~~a~ 1291 (2445)
-+..|--.+|.+||-|| |.++|+-++.+||.|+..+
T Consensus 18 ~~~~lp~e~~~~i~~~l--~~~~l~~~~~v~~~~~~~~ 53 (445)
T 2ovr_B 18 FISLLPKELALYVLSFL--EPKDLLQAAQTCRYWRILA 53 (445)
T ss_dssp TTTSSCHHHHHHHHTTS--CHHHHHHHTTSCHHHHHHH
T ss_pred hhHHCCHHHHHHHHHhC--CHHHHHHHHHHhHHHHhhc
Confidence 36678889999999999 7999999999999999876
No 63
>3p1f_A CREB-binding protein; structural genomics consortium, SGC, CBP, crebbp, CREB bindi protein isoform A, KAT3A, RSTS, RST, bromodomain, transcrip; HET: 3PF; 1.63A {Homo sapiens} SCOP: a.29.2.1 PDB: 3dwy_A 3p1d_A 3p1c_A 3p1e_A* 3svh_A* 4a9k_A* 1jsp_B* 2d82_A* 2l84_A* 2l85_A* 2rny_A* 3i3j_A
Probab=51.15 E-value=24 Score=36.06 Aligned_cols=61 Identities=20% Similarity=0.343 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHhc--ccccccc---h----------------hHHHHhhhccccccccCCcchhhhHHHHHHHHHHh
Q 000067 1481 MEEFLASSLKEIMRVN--TFEFFVP---K----------------VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKA 1539 (2445)
Q Consensus 1481 ~e~f~~~~l~~im~~~--~~dff~~---k----------------v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~ 1539 (2445)
+-+.|..-|..+|+.. ..-|--| + ...|+.|+++|+|.+ +..+..|+..|+..|+.+
T Consensus 12 l~~~l~~~l~~l~~~~~~s~~F~~pv~~~~~~~pdY~~iI~~Pmdl~tI~~kl~~~~Y~~--~~~f~~D~~li~~Na~~y 89 (119)
T 3p1f_A 12 LRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQE--PWQYVDDVWLMFNNAWLY 89 (119)
T ss_dssp HHHHHHHHHHHHHTCTTTTGGGSSCCCHHHHTCTTHHHHCSSCCCHHHHHHHHHTTCCSS--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCchhcCCCCchhccCCCHHHHhcCCCCHHHHHHHHhcCCCCC--HHHHHHHHHHHHHHHHHH
Confidence 4456667777777743 3334322 2 267899999999965 678899999999999998
Q ss_pred ccCC
Q 000067 1540 KNRG 1543 (2445)
Q Consensus 1540 k~~~ 1543 (2445)
-+.+
T Consensus 90 N~~~ 93 (119)
T 3p1f_A 90 NRKT 93 (119)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 5443
No 64
>2grc_A Probable global transcription activator SNF2L4; bromodomain, BRG1, chromatin remodelling, acely-lysine binding, protein-protein interactions; 1.50A {Homo sapiens} PDB: 3uvd_A 2h60_A
Probab=51.13 E-value=29 Score=36.23 Aligned_cols=36 Identities=25% Similarity=0.498 Sum_probs=31.0
Q ss_pred HHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCC
Q 000067 1506 AEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRG 1543 (2445)
Q Consensus 1506 ~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~ 1543 (2445)
..|..|+++|+|.+ +..+..|+..||..|+.+-..+
T Consensus 62 ~tI~~kl~~~~Y~s--~~~f~~Dv~Li~~Na~~yN~~~ 97 (129)
T 2grc_A 62 KKIKERIRNHKYRS--LNDLEKDVMLLCQNAQTFNLEG 97 (129)
T ss_dssp HHHHHHHHTTCCCS--HHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHhcCCCCC--HHHHHHHHHHHHHHHHHHCCCC
Confidence 57899999999965 6789999999999999985544
No 65
>3g0l_A Hwalp4, bromodomain adjacent to zinc finger domain protei; BAZB2, KIAA1 WALP4, structural genomics consortium, SGC, transcription; 2.03A {Homo sapiens} PDB: 3q2f_A* 2e7o_A
Probab=50.40 E-value=22 Score=36.23 Aligned_cols=59 Identities=14% Similarity=0.156 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhcccccccch------------------hHHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCC
Q 000067 1483 EFLASSLKEIMRVNTFEFFVPK------------------VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRG 1543 (2445)
Q Consensus 1483 ~f~~~~l~~im~~~~~dff~~k------------------v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~ 1543 (2445)
.++..-|.+||+..-...|.-- ...|+.|+++|+|. .+..+..|+..|+..|+.+-..+
T Consensus 16 ~~c~~il~~l~~~~~s~~F~~pv~~~~~pdY~~~I~~Pmdl~tI~~kl~~~~Y~--~~~~f~~D~~li~~Na~~yN~~~ 92 (117)
T 3g0l_A 16 ALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYP--NLETFALDVRLVFDNCETFNEDD 92 (117)
T ss_dssp HHHHHHHHHHHTSTTCGGGSSCCCTTTSTTHHHHCSSCCCHHHHHHHHHTTCCC--SHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHhCCCchhhcCcCChhhcCChHHHcCCCCCHHHHHHHHhCCCCC--CHHHHHHHHHHHHHHHHHHCCCC
Confidence 3455667788877666666322 35689999999996 57788999999999999985443
No 66
>3jvl_A Bromodomain-containing protein 4; alpha helical, N-acetyl lysine binding domain, signaling protein; 1.20A {Mus musculus} PDB: 3jvm_A 2dww_A 2i8n_A 3oni_A* 2dvv_A* 2e3k_A* 2g4a_A 3s92_A* 2oo1_A* 2e7n_A 2wp1_A*
Probab=48.02 E-value=14 Score=37.74 Aligned_cols=48 Identities=15% Similarity=0.165 Sum_probs=36.9
Q ss_pred hHHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCCCCCCccchhhHHHHHHHHhhc
Q 000067 1505 VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRGSAGDMNRITTLFIQLATRLEQ 1564 (2445)
Q Consensus 1505 v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~~~~~~~~i~~~~~~~~~~~~~ 1564 (2445)
...|+.|+++|+|.+ +..+..|+..|+..|+.+-..+. .|.++|..|+
T Consensus 57 l~tI~~kl~~~~Y~~--~~~f~~D~~li~~Na~~yN~~~s----------~~~~~A~~L~ 104 (120)
T 3jvl_A 57 MSTIKSKLESREYRD--AQEFGADVRLMFSNCYKYNPPDH----------EVVAMARKLQ 104 (120)
T ss_dssp HHHHHHHHHTTCCCS--HHHHHHHHHHHHHHHHHHSCTTS----------HHHHHHHHHH
T ss_pred HHHHHHHHccCCCCC--HHHHHHHHHHHHHHHHHHCCCCC----------HHHHHHHHHH
Confidence 467899999999964 77899999999999999844332 2345666665
No 67
>3mqm_A Probable histone-lysine N-methyltransferase ASH1L; KIAA1420, absent small and homeotic disks prote homolog, lysine N-methyltransferase 2H, KMT2H; 2.54A {Homo sapiens}
Probab=46.99 E-value=30 Score=35.75 Aligned_cols=37 Identities=27% Similarity=0.442 Sum_probs=31.3
Q ss_pred hHHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCC
Q 000067 1505 VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRG 1543 (2445)
Q Consensus 1505 v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~ 1543 (2445)
+..|+.|+++|+|. -+..+..|+..|+..|..+-..+
T Consensus 58 L~tI~~kl~~~~Y~--s~~~f~~D~~li~~Na~~yN~~~ 94 (126)
T 3mqm_A 58 LITIEKQILTGYYK--TVEAFDADMLKVFRNAEKYYGRK 94 (126)
T ss_dssp HHHHHHHHHHTCCC--SHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCCC--CHHHHHHHHHHHHHHHHHHCCCC
Confidence 36799999999995 46789999999999999985544
No 68
>2ouo_A HUNK1 protein, bromodomain-containing protein 4; BRD4, structural genomics consortium, SGC, signaling protein; 1.89A {Homo sapiens} PDB: 2yem_A*
Probab=46.23 E-value=16 Score=38.28 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=31.1
Q ss_pred HHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCC
Q 000067 1506 AEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRG 1543 (2445)
Q Consensus 1506 ~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~ 1543 (2445)
..|+.|+++|+|.+ +..+..|+..|+..|+.+-..+
T Consensus 71 ~tI~~kl~~~~Y~s--~~ef~~Dv~li~~Na~~yN~~~ 106 (130)
T 2ouo_A 71 STIKSKLEAREYRD--AQEFGADVRLMFSNCYKYNPPD 106 (130)
T ss_dssp HHHHHHHHTTCCSS--HHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHcCCCCC--HHHHHHHHHHHHHHHHHHcCCC
Confidence 67999999999975 6789999999999999985543
No 69
>3q2e_A Bromodomain and WD repeat-containing protein 1; structural genomics consortium, SGC, cell cycle progression, signal transduction, apoptosis; 1.74A {Homo sapiens}
Probab=44.95 E-value=35 Score=35.17 Aligned_cols=56 Identities=16% Similarity=0.122 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhcccccccch------------------hHHHHhhhccccccccCCcchhhhHHHHHHHHHHhc
Q 000067 1483 EFLASSLKEIMRVNTFEFFVPK------------------VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAK 1540 (2445)
Q Consensus 1483 ~f~~~~l~~im~~~~~dff~~k------------------v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k 1540 (2445)
..+..-|..||+.-....|.-- +..|+.|+++|+|.+ +..+..||..|+..|..+-
T Consensus 13 ~~c~~il~~l~~~~~s~~F~~pv~~~~~pdY~~~I~~PmdL~tI~~kl~~~~Y~~--~~~f~~D~~li~~Na~~yN 86 (123)
T 3q2e_A 13 KQCKELVNLIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDS--PLEFCKDIRLIFSNAKAYT 86 (123)
T ss_dssp HHHHHHHHHHHTSGGGGGGSSCCCTTTCTTHHHHCSSCCCHHHHHHHHHTTCCSS--HHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCcHhhcCCCChhhcCCHHHHcCCCCCHHHHHHHHhcCCCCC--HHHHHHHHHHHHHHHHHHC
Confidence 4455667778876666666421 367999999999964 6688999999999999874
No 70
>3iu5_A Protein polybromo-1; PB1, polybromo 1 isoform 1, BAF180, polybromo0ID, PBRM1, BRG associated factor 180, structural genomics, SGC; 1.63A {Homo sapiens}
Probab=40.69 E-value=21 Score=36.43 Aligned_cols=37 Identities=14% Similarity=0.190 Sum_probs=31.3
Q ss_pred hHHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCC
Q 000067 1505 VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRG 1543 (2445)
Q Consensus 1505 v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~ 1543 (2445)
+..|+.|+++|+|. .+..+..|+..|+..|..+-..+
T Consensus 54 L~tI~~kl~~~~Y~--s~~~f~~D~~li~~Na~~yN~~~ 90 (116)
T 3iu5_A 54 LMKIQQKLKMEEYD--DVNLLTADFQLLFNNAKSYYKPD 90 (116)
T ss_dssp HHHHHHHHHTTCCC--SHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHcCCCC--CHHHHHHHHHHHHHHHHHHCCCC
Confidence 47899999999994 56789999999999999985443
No 71
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=40.25 E-value=37 Score=41.15 Aligned_cols=76 Identities=18% Similarity=0.206 Sum_probs=52.0
Q ss_pred ceeeeccCCCCCchhHHHHHHHhhhcccccceeeecccccCChhHHHHHHHhCCCcceEeecccccccc-----ccccCC
Q 000067 1298 SRQVDLSSVGPNCTDSLIRKTLNAFDKEKLNSILLVGCTNITSGMLEEILQSFPHLSSIDIRGCGQFGE-----LALKFP 1372 (2445)
Q Consensus 1298 ~~~~~~ss~g~~ctd~~~~~~~~~y~~~~~~~~~l~gc~~~~~~~l~~~l~~~p~~~~~~i~gc~q~~~-----l~~~f~ 1372 (2445)
-+.+||+. .-||..+..|.. .-.+++.+-|.+|. ||...+..++..+|.|.+++|++|.- ++ +...++
T Consensus 434 L~~L~L~~---~l~~~~~~~l~~--~~~~L~~L~L~~~~-i~~~~~~~l~~~~~~L~~L~L~~n~~-~~~~~~~~~~~l~ 506 (594)
T 2p1m_B 434 LRRLSLSG---LLTDKVFEYIGT--YAKKMEMLSVAFAG-DSDLGMHHVLSGCDSLRKLEIRDCPF-GDKALLANASKLE 506 (594)
T ss_dssp CCEEECCS---SCCHHHHHHHHH--HCTTCCEEEEESCC-SSHHHHHHHHHHCTTCCEEEEESCSC-CHHHHHHTGGGGG
T ss_pred ccEEeecC---cccHHHHHHHHH--hchhccEeeccCCC-CcHHHHHHHHhcCCCcCEEECcCCCC-cHHHHHHHHHhCC
Confidence 45677754 667777777665 23568888886665 78888888888888888888888864 43 334466
Q ss_pred ccceeecc
Q 000067 1373 NINWVKSQ 1380 (2445)
Q Consensus 1373 ~~~w~~~~ 1380 (2445)
+++.+.=+
T Consensus 507 ~L~~L~l~ 514 (594)
T 2p1m_B 507 TMRSLWMS 514 (594)
T ss_dssp GSSEEEEE
T ss_pred CCCEEeee
Confidence 66655433
No 72
>3k2j_A Protein polybromo-1; PB1, polybromo 1 isoform 1, BAF180, polybromo01D, PBRM1, BRG associated factor 180, structural genomics consortium, SGC; 2.20A {Homo sapiens}
Probab=37.74 E-value=26 Score=36.70 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=30.9
Q ss_pred hHHHHhhhccccccccCCcchhhhHHHHHHHHHHhccC
Q 000067 1505 VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNR 1542 (2445)
Q Consensus 1505 v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~ 1542 (2445)
+..|+.|+++|+|.+ +..+..|+..|+..|..+-..
T Consensus 66 L~tI~~kL~~~~Y~s--~~ef~~Dv~Lif~Na~~yN~~ 101 (130)
T 3k2j_A 66 LQQIRTKLKNQEYET--LDHLECDLNLMFENAKRYNVP 101 (130)
T ss_dssp HHHHHHHHHTTCCSS--HHHHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHhcCCCCC--HHHHHHHHHHHHHHHHHHCCC
Confidence 578999999999954 778899999999999998443
No 73
>3mb4_A Protein polybromo-1; PB1, polybromo 1 isoform 1, BAF180, polybromo-1D, PBRM1, BRG associated factor 180, structural genomics consortium, SGC; 1.66A {Homo sapiens} PDB: 3g0j_A 2yqd_A
Probab=37.10 E-value=26 Score=36.27 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=31.1
Q ss_pred hHHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCC
Q 000067 1505 VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRG 1543 (2445)
Q Consensus 1505 v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~ 1543 (2445)
+..|+.|+++|+|. .+..+..|+..|+..|..+-..+
T Consensus 64 L~tI~~kl~~~~Y~--~~~~f~~D~~li~~Na~~yN~~~ 100 (124)
T 3mb4_A 64 MEKIRSHMMANKYQ--DIDSMVEDFVMMFNNACTYNEPE 100 (124)
T ss_dssp HHHHHHHHHTTCCC--SHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHcCCCC--CHHHHHHHHHHHHHHHHHHCCCC
Confidence 46799999999995 46788999999999999985433
No 74
>2yyn_A Transcription intermediary factor 1-alpha; bromo domain, structural genomics, NPPSFA; 2.50A {Homo sapiens}
Probab=33.67 E-value=59 Score=34.23 Aligned_cols=70 Identities=11% Similarity=0.031 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhcccccccch-----------------hHHHHhhhcc--ccccccCCcchhhhHHHHHHHHHHhccCCC
Q 000067 1484 FLASSLKEIMRVNTFEFFVPK-----------------VAEIEGRMKK--GYYISHGLGSVKDDISRMCRDAIKAKNRGS 1544 (2445)
Q Consensus 1484 f~~~~l~~im~~~~~dff~~k-----------------v~~ie~~~k~--gyy~~~g~~~~k~di~~mcrda~~~k~~~~ 1544 (2445)
++..-|.+||+......|.-- +..|+.|+++ |+|. -+..+..||..|+..|+.+-..+.
T Consensus 24 ~c~~il~~L~~~~~s~~F~~Pv~~~~pdY~~iIk~PmDL~tI~~kL~~~~~~Y~--s~~ef~~Dv~Lif~Na~~yN~~~s 101 (135)
T 2yyn_A 24 KCERLLLFLYCHEMSLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYS--KPEDFVADFRLIFQNCAEFNEPDS 101 (135)
T ss_dssp HHHHHHHHHHTSGGGGGGSSCCCTTSTTHHHHCSSCCCHHHHHHHHHSSSCCCS--SHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHHHhCccchhhcCCCcccCCCHHHHcCCCCCHHHHHHHHhccccCCC--CHHHHHHHHHHHHHHHHHHCCCCC
Confidence 455566778877777777421 3679999998 5774 467899999999999999855443
Q ss_pred CCCccchhhHHHHHHHHhhcc
Q 000067 1545 AGDMNRITTLFIQLATRLEQG 1565 (2445)
Q Consensus 1545 ~~~~~~i~~~~~~~~~~~~~~ 1565 (2445)
.|.++|..|+.
T Consensus 102 ----------~i~~~A~~L~~ 112 (135)
T 2yyn_A 102 ----------EVANAGIKLEN 112 (135)
T ss_dssp ----------HHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHH
Confidence 23466666653
No 75
>3tlp_A Protein polybromo-1; PB1, polybromo 1 isoform 1, BAF180, polybromo-1D, PBRM1, BRG associated factor 180, structural genomics consortium, SGC; 2.13A {Homo sapiens}
Probab=33.39 E-value=34 Score=36.40 Aligned_cols=37 Identities=22% Similarity=0.346 Sum_probs=31.0
Q ss_pred hHHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCC
Q 000067 1505 VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRG 1543 (2445)
Q Consensus 1505 v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~ 1543 (2445)
+..|+.|+++|+|.+ +..+..|+..||..|..+-..+
T Consensus 74 L~tI~~kl~~~~Y~s--~~ef~~D~~li~~Na~~yN~~~ 110 (150)
T 3tlp_A 74 LKIIEHNIRNDKYAG--EEGMIEDMKLMFRNARHYNEEG 110 (150)
T ss_dssp HHHHHHHHHTTCCSS--HHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHhcCCCCC--HHHHHHHHHHHHHHHHHHCCCC
Confidence 367999999999965 5788999999999999985443
No 76
>3uv5_A Transcription initiation factor TFIID subunit 1; tandem bromodomain, TAF1, cell cycle gene 1 protein, TBP-ASS factor 250 kDa; 2.03A {Homo sapiens} PDB: 1eqf_A
Probab=31.91 E-value=59 Score=37.53 Aligned_cols=63 Identities=8% Similarity=0.199 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHhcccccccch------------------hHHHHhhhccccccccCCcchhhhHHHHHHHHHHhcc
Q 000067 1480 RMEEFLASSLKEIMRVNTFEFFVPK------------------VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKN 1541 (2445)
Q Consensus 1480 ~~e~f~~~~l~~im~~~~~dff~~k------------------v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~ 1541 (2445)
.+..+|..-|..||+.-...+|.-- +..|+.|+++|+|. .+..+..|+..||..|..+-.
T Consensus 14 ~l~~~l~~il~~l~~~~~~~~F~~pv~~~~~pdY~~iI~~PmdL~tI~~kl~~~~Y~--~~~~f~~D~~li~~Na~~yN~ 91 (265)
T 3uv5_A 14 TLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYP--SREEFREHLELIVKNSATYNG 91 (265)
T ss_dssp HHHHHHHHHHHHHHTSTTCGGGTSCCCTTTSTTHHHHCSSCCCHHHHHHHHHTTCCS--SHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCchhhhCCCChhhcCCHHHHhCCCCcHHHHHHHHHcCCCC--CHHHHHHHHHHHHhhhhhcCC
Confidence 4455666677777776555666421 36799999999996 467889999999999999855
Q ss_pred CCC
Q 000067 1542 RGS 1544 (2445)
Q Consensus 1542 ~~~ 1544 (2445)
.+.
T Consensus 92 ~~s 94 (265)
T 3uv5_A 92 PKH 94 (265)
T ss_dssp TTC
T ss_pred CCC
Confidence 443
No 77
>3q0b_X Histone-lysine N-methyltransferase, H3 lysine-9 S SUVH5; SRA, fully methylated CG, SUVH5, 5MC binding protein, fully methylated CG duplex DNA; HET: DNA 5CM; 2.20A {Arabidopsis thaliana} PDB: 3q0c_X* 3q0d_X* 3q0f_X*
Probab=31.44 E-value=6.2 Score=43.49 Aligned_cols=24 Identities=21% Similarity=0.165 Sum_probs=20.8
Q ss_pred cCCCCcccccccc-----cccccccccCC
Q 000067 1695 TTDEGLDFSDDRE-----WGARMTKASLV 1718 (2445)
Q Consensus 1695 ~~~dgl~~i~~~~-----~G~~m~k~~lv 1718 (2445)
+.|||||.|.+.| .|..++|+.|+
T Consensus 125 yrYDGLY~V~~~w~e~g~~G~~v~kf~L~ 153 (167)
T 3q0b_X 125 YVYDGLYLVEEYWEETGSHGKLVFKFKLR 153 (167)
T ss_dssp EEEEEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEECeEEEEeeeEEeeCCCCcEEEEEEEE
Confidence 4579999997777 78899999998
No 78
>3uv4_A Second bromodomain of human transcription initiat TFIID subunit 1 (TAF1); structural genomics consortium, SGC; 1.89A {Homo sapiens} PDB: 3hmh_A
Probab=29.34 E-value=37 Score=36.77 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=31.5
Q ss_pred hHHHHhhhccccccccCCcchhhhHHHHHHHHHHhccCC
Q 000067 1505 VAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRG 1543 (2445)
Q Consensus 1505 v~~ie~~~k~gyy~~~g~~~~k~di~~mcrda~~~k~~~ 1543 (2445)
...|+.|+++|+|.+ +..+..|+..|+..|+.+-..+
T Consensus 73 L~tI~~kl~~~~Y~s--~~ef~~Dv~Lif~Na~~yN~~~ 109 (158)
T 3uv4_A 73 LETIRKNISKHKYQS--RESFLDDVNLILANSVKYNGPE 109 (158)
T ss_dssp HHHHHHHHHTTCCSS--HHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCCCC--HHHHHHHHHHHHHHHHHHCCCC
Confidence 367999999999964 7789999999999999985544
No 79
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=26.01 E-value=21 Score=37.17 Aligned_cols=86 Identities=14% Similarity=0.227 Sum_probs=54.4
Q ss_pred hhHHHHHHHhhhcccccceeeecccccCChhHHHHHHHhCCCcceEeeccccccccc--cccCCccceeecccccCcccC
Q 000067 1311 TDSLIRKTLNAFDKEKLNSILLVGCTNITSGMLEEILQSFPHLSSIDIRGCGQFGEL--ALKFPNINWVKSQKSRGAKFN 1388 (2445)
Q Consensus 1311 td~~~~~~~~~y~~~~~~~~~l~gc~~~~~~~l~~~l~~~p~~~~~~i~gc~q~~~l--~~~f~~~~w~~~~~~~~~~~~ 1388 (2445)
|..++......++-.++..+.|.|| +|+. +..+...+|.|.++|+.+| ++..+ -..++++.++.=+.+.++.++
T Consensus 5 t~~~i~~~~~~~~~~~L~~L~l~~n-~l~~--i~~~~~~~~~L~~L~Ls~N-~l~~~~~l~~l~~L~~L~Ls~N~l~~~~ 80 (176)
T 1a9n_A 5 TAELIEQAAQYTNAVRDRELDLRGY-KIPV--IENLGATLDQFDAIDFSDN-EIRKLDGFPLLRRLKTLLVNNNRICRIG 80 (176)
T ss_dssp CHHHHHTSCEEECTTSCEEEECTTS-CCCS--CCCGGGGTTCCSEEECCSS-CCCEECCCCCCSSCCEEECCSSCCCEEC
T ss_pred cHHHHHHHHhcCCcCCceEEEeeCC-CCch--hHHhhhcCCCCCEEECCCC-CCCcccccccCCCCCEEECCCCcccccC
Confidence 4455555556677778888888888 5553 2445555668899998888 34444 123456777776666666666
Q ss_pred Ccc-hhhchhhhh
Q 000067 1389 DSR-SKIRSLKQI 1400 (2445)
Q Consensus 1389 ~~~-~k~~slk~~ 1400 (2445)
..- ..+.+|+.+
T Consensus 81 ~~~~~~l~~L~~L 93 (176)
T 1a9n_A 81 EGLDQALPDLTEL 93 (176)
T ss_dssp SCHHHHCTTCCEE
T ss_pred cchhhcCCCCCEE
Confidence 554 355555554
No 80
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=24.67 E-value=34 Score=39.40 Aligned_cols=74 Identities=19% Similarity=0.313 Sum_probs=50.9
Q ss_pred cccceeeecccccCChhHHHHHHHhCCCcceEeecccccccccccc------------CCccceeecccccCcccCCcch
Q 000067 1325 EKLNSILLVGCTNITSGMLEEILQSFPHLSSIDIRGCGQFGELALK------------FPNINWVKSQKSRGAKFNDSRS 1392 (2445)
Q Consensus 1325 ~~~~~~~l~gc~~~~~~~l~~~l~~~p~~~~~~i~gc~q~~~l~~~------------f~~~~w~~~~~~~~~~~~~~~~ 1392 (2445)
.++..+-|.+| +|+ .+-..+..++.|.+++|.+|...+.+... +++++.+.=..+.++.++..-.
T Consensus 127 ~~L~~L~Ls~n-~l~--~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~ 203 (328)
T 4fcg_A 127 AGLETLTLARN-PLR--ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIA 203 (328)
T ss_dssp TTCSEEEEESC-CCC--CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGG
T ss_pred CCCCEEECCCC-ccc--cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhc
Confidence 56777777776 444 33445778889999999999888887654 5677777766666666665533
Q ss_pred hhchhhhhc
Q 000067 1393 KIRSLKQIT 1401 (2445)
Q Consensus 1393 k~~slk~~~ 1401 (2445)
++.+|+.+.
T Consensus 204 ~l~~L~~L~ 212 (328)
T 4fcg_A 204 NLQNLKSLK 212 (328)
T ss_dssp GCTTCCEEE
T ss_pred CCCCCCEEE
Confidence 556666553
No 81
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=24.23 E-value=81 Score=34.40 Aligned_cols=55 Identities=11% Similarity=0.116 Sum_probs=39.0
Q ss_pred HHHHHHHHHhcccccccc-----------------hhHHHHhhhcc--ccccccCCcchhhhHHHHHHHHHHhccC
Q 000067 1486 ASSLKEIMRVNTFEFFVP-----------------KVAEIEGRMKK--GYYISHGLGSVKDDISRMCRDAIKAKNR 1542 (2445)
Q Consensus 1486 ~~~l~~im~~~~~dff~~-----------------kv~~ie~~~k~--gyy~~~g~~~~k~di~~mcrda~~~k~~ 1542 (2445)
..-|..||+.-...+|.- -+..|+.||++ |+|.+ +..+..||..|+..|+.+-..
T Consensus 87 ~~il~~l~~~~~s~~F~~Pv~~~~pdY~~iIk~PmdL~tI~~kl~~~~~~Y~s--~~ef~~Dv~li~~Na~~yN~~ 160 (184)
T 3o36_A 87 ERLLLFLYCHEMSLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYSK--PEDFVADFRLIFQNCAEFNEP 160 (184)
T ss_dssp HHHHHHHHHSTTCHHHHSCCCTTSTTHHHHCSSCCCHHHHHHHHHSTTCSCCS--HHHHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHhchhhhhhccccccCCCchhhhcCCCCCHHHHHHHHHhcCCCCCC--HHHHHHHHHHHHHHHHHHCCC
Confidence 344556666555555541 24679999998 66754 667899999999999998543
No 82
>3oln_A E3 ubiquitin-protein ligase UHRF2; DNA-binding, metal-binding, nucleus, phosphorylation transcription, transcription regulation; 2.30A {Homo sapiens} SCOP: b.122.1.12
Probab=21.86 E-value=11 Score=43.45 Aligned_cols=24 Identities=13% Similarity=-0.118 Sum_probs=21.0
Q ss_pred cCCCCcccccccc-----c-ccccccccCC
Q 000067 1695 TTDEGLDFSDDRE-----W-GARMTKASLV 1718 (2445)
Q Consensus 1695 ~~~dgl~~i~~~~-----~-G~~m~k~~lv 1718 (2445)
+.|||||.|.+.| . |..++|+.|+
T Consensus 165 yrYDGLY~V~~~W~e~g~s~G~~V~Kf~L~ 194 (231)
T 3oln_A 165 NRYDGIYKVVKYWPEISSSHGFLVWRYLLR 194 (231)
T ss_dssp EEEEEEEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred eEeCeEEEEEEEEeccCCcCCeEEEEEEEE
Confidence 3689999997777 6 8999999998
No 83
>3fde_A E3 ubiquitin-protein ligase UHRF1; SRA domain, base flipping, DNA CPG methylation, cell cycle, developmental protein, DNA damage; HET: 5CM; 1.41A {Mus musculus} SCOP: b.122.1.12 PDB: 2zo0_B* 2zo2_B* 3f8i_A* 2zo1_B* 3f8j_B* 2zkd_A* 2zke_A* 2zkf_A* 2zkg_A 3dwh_A 3bi7_A 3clz_A*
Probab=20.73 E-value=13 Score=42.61 Aligned_cols=55 Identities=18% Similarity=0.189 Sum_probs=35.3
Q ss_pred cCCCCcccccccc-----cccccccccCC--CCccceeeeEEeeeeccchHhHhhhcc--cccchhhhhhhc
Q 000067 1695 TTDEGLDFSDDRE-----WGARMTKASLV--PPVTRKYEVIDQYVIVADEEDVRRKMR--VSLPEDYAEKLN 1757 (2445)
Q Consensus 1695 ~~~dgl~~i~~~~-----~G~~m~k~~lv--P~~trky~vI~~y~iv~D~e~v~~km~--v~lpd~~~Ekl~ 1757 (2445)
+.|||||.|.+.| .|+.++|+.|+ |+-..-|+. +..+-..+++ ...|+-|.|.+-
T Consensus 141 yrYDGLY~V~~~W~e~g~~G~~V~kf~L~R~~gqp~~w~~--------~~~~~~~~~~~~~~~p~~~~~~~~ 204 (212)
T 3fde_A 141 NRYDGIYKVVKYWPERGKSGFLVWRYLLRRDDTEPEPWTR--------EGKDRTRQLGLTMQYPEGYLEALA 204 (212)
T ss_dssp EEEEEEEEEEEEEEEECTTSSEEEEEEEEECCSSCCTTSH--------HHHHHHHHHTCCCBCCTTHHHHHH
T ss_pred eEeCeEEEEEEEEEccCCCCcEEEEEEEEECCCCCCCcch--------hhHhhhhccccceeCCcchhhHhh
Confidence 3689999997777 79999999998 433334432 2222334433 346777776554
No 84
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=20.36 E-value=67 Score=37.28 Aligned_cols=64 Identities=19% Similarity=0.390 Sum_probs=39.1
Q ss_pred hcchhhHHHHHhhhcccceeeeccCCCCCchhHHHHHHHhhhcccccceeeecccccCChhHHHHHHHhCCCcceEe
Q 000067 1281 SLTCRHWRAAVRFYKGISRQVDLSSVGPNCTDSLIRKTLNAFDKEKLNSILLVGCTNITSGMLEEILQSFPHLSSID 1357 (2445)
Q Consensus 1281 ~~tc~~w~~a~~~yk~~~~~~~~ss~g~~ctd~~~~~~~~~y~~~~~~~~~l~gc~~~~~~~l~~~l~~~p~~~~~~ 1357 (2445)
+..|..|-..|+-- . .+..-+...+..+++.+..+.+.+||| |||-+.- |.+.|+.-+.+.-||
T Consensus 143 ~~~~~~lV~~vE~g--~--------~~~~~~~~~l~~~l~~l~~~g~D~iIL-GCTh~pl--l~~~i~~~~~v~viD 206 (268)
T 3out_A 143 SNPCGLFVSMIEEG--F--------VSGHIVELVAKEYLSYFHDKNIQALIL-GCTHYPI--IKESIAKILDVKLID 206 (268)
T ss_dssp EEECTTHHHHHHTT--C--------CSSHHHHHHHHHHHGGGTTSCCSEEEE-CSTTGGG--GHHHHHHHCCSEEEC
T ss_pred cCCChHHHHHHHcC--C--------cCCHHHHHHHHHHHHHHHhCCCCEEEE-CCCChHH--HHHHHhcCCCCceec
Confidence 56677776666421 0 012245677888888888888999988 8988873 334443344444443
No 85
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=20.20 E-value=50 Score=40.51 Aligned_cols=28 Identities=18% Similarity=0.348 Sum_probs=24.5
Q ss_pred CCcceecCCccceEEeCccCCcCCCCEEEE
Q 000067 1882 PDDKYVAYRKGLGVVCNKEGGFGEDDFVVE 1911 (2445)
Q Consensus 1882 PleVFrT~rKGwGVFAteDegIpKGEFI~E 1911 (2445)
.++++.++.+|.||+|+++ |++|+.|+.
T Consensus 8 ~ve~~~~~~~GRgl~A~r~--i~~Ge~Il~ 35 (433)
T 3qww_A 8 GLERFCSAGKGRGLRALRP--FHVGDLLFS 35 (433)
T ss_dssp TEEEEECTTSCEEEEESSC--BCTTCEEEE
T ss_pred cEEEeecCCCcCeEEECCC--CCCCCEEEe
Confidence 3568889999999999998 999998864
No 86
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=20.03 E-value=1.5e+02 Score=34.77 Aligned_cols=65 Identities=17% Similarity=0.321 Sum_probs=46.2
Q ss_pred ceeeeccCCCCCchhHHHHHHHhhhc--ccccceeeecccccCChh---HHHHHHHhCCCcceEeecccccccc
Q 000067 1298 SRQVDLSSVGPNCTDSLIRKTLNAFD--KEKLNSILLVGCTNITSG---MLEEILQSFPHLSSIDIRGCGQFGE 1366 (2445)
Q Consensus 1298 ~~~~~~ss~g~~ctd~~~~~~~~~y~--~~~~~~~~l~gc~~~~~~---~l~~~l~~~p~~~~~~i~gc~q~~~ 1366 (2445)
-+.+||+.- .-+|..+..+.++.. -.+++.+-|.+| .|+.. .+...|..+|.|.++||.|| +|++
T Consensus 343 L~~L~Ls~n--~i~~~~~~~l~~~l~~~~~~L~~L~L~~n-~i~~~~~~~l~~~l~~~~~L~~L~l~~N-~i~~ 412 (461)
T 1z7x_W 343 LLELQISNN--RLEDAGVRELCQGLGQPGSVLRVLWLADC-DVSDSSCSSLAATLLANHSLRELDLSNN-CLGD 412 (461)
T ss_dssp CCEEECCSS--BCHHHHHHHHHHHHTSTTCCCCEEECTTS-CCCHHHHHHHHHHHHHCCCCCEEECCSS-SCCH
T ss_pred ccEEEccCC--ccccccHHHHHHHHcCCCCceEEEECCCC-CCChhhHHHHHHHHHhCCCccEEECCCC-CCCH
Confidence 457888764 466766666666554 357888889888 67753 55666778899999999988 4443
Done!