Your job contains 1 sequence.
>000069
MLFVQCVMAVLLYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKN
ASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFES
NGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQK
LLMKRVEENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRL
CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL
IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD
VLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEE
AAPVLDDDALNDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRL
VTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQW
TEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPAVYSTEPPAPLLPPPPPSLDPPQ
LQQSKEVTPPSKRGRGRPRRADKSPVPVVLPAPSGTVKVEKDAMTGQSTSASASLPGSTT
VSGVSGSAQHVMVGIAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPR
RRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDS
VSPSAVKGQSGTIDPSSAVAALNSELNTNLATAPPVPQPSPQFSSVSMQTKGQSRKTQSG
GVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSN
KIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMD
LGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLPAL
DSITEPYTGSTNTEGISNTIHHVPGAVAARTPSISTSAPAASLSIPPQASVSVPVKRHGR
KTPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETAD
VNDVARVMKEIFSETCSSKAKTGDSSLNEGKDASIRALSSSSAIAEVAKKQSSDDKTCSV
TPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRI
ENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPAST
EAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVKW
KNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSLVKELIHRSPDHSDMVIGNVP
GNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVK
TDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDAIVNNLLETPLD
IKSIGGPIVSMKAADVADADHPLETAVELGSPVNSCTVEPSAEAAERSSETIAERSLDNP
LSIEGIGLSVSAKTDDVADHPVEPPGCDKSDIASMEAEAAVSSSETIVESQVLTKALDVG
IALDKTEIATSCDTASLDDSHDNGNVEVLCGGTGDKKADCKMEPDCLVASDSVNMELVPR
DFGVGRRDGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGG
VIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVD
ELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDS
KGSIGDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETV
AEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ
MGVSLGGATVMEKSSEDLATPPLSLANEEEMIEGFDNDPTGISMAVMDSKECAAEAADQM
CVSEGCVVVTEKLSEDLGLNSSSSETKEKKIEGSSEKDPVNSSVTVEDSKGFEAEACDQL
HVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVPETVP
EELGLPSSPMVVEEEKIEGLSEEEPSASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQ
DLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSI
PVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENT
SEGMGGPSPPLVIAEDKTENEIEEDPVVNSVAVEESKGSEAD
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000069
(2442 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062840 - symbol:SYD "SPLAYED" species:3702 "A... 2272 4.4e-256 5
UNIPROTKB|F1S594 - symbol:LOC100622433 "Uncharacterized p... 974 4.2e-102 4
WB|WBGene00016868 - symbol:C52B9.8 species:6239 "Caenorha... 974 7.4e-100 4
UNIPROTKB|E1C2F7 - symbol:E1C2F7 "Uncharacterized protein... 1003 1.7e-96 3
UNIPROTKB|K7GT64 - symbol:LOC100622433 "Uncharacterized p... 935 7.0e-96 3
TAIR|locus:2150270 - symbol:CHR23 "chromatin remodeling 2... 938 8.1e-96 2
MGI|MGI:99603 - symbol:Smarca2 "SWI/SNF related, matrix a... 1001 3.3e-95 4
UNIPROTKB|D4A4J2 - symbol:Smarca2 "Protein Smarca2" speci... 1001 5.3e-95 3
UNIPROTKB|E9PTG1 - symbol:Smarca2 "Protein Smarca2" speci... 1001 7.5e-95 4
UNIPROTKB|A5PKK5 - symbol:SMARCA2 "SMARCA2 protein" speci... 999 7.8e-95 3
UNIPROTKB|E2RKP4 - symbol:SMARCA2 "Uncharacterized protei... 999 8.0e-95 3
UNIPROTKB|F1SJG5 - symbol:SMARCA2 "Uncharacterized protei... 999 8.0e-95 3
UNIPROTKB|P51531 - symbol:SMARCA2 "Probable global transc... 999 1.0e-94 3
UNIPROTKB|J9P5P2 - symbol:SMARCA2 "Uncharacterized protei... 999 1.7e-94 4
RGD|1302988 - symbol:Smarca2 "SWI/SNF related, matrix ass... 997 2.2e-94 4
ZFIN|ZDB-GENE-030131-5964 - symbol:smarca2 "SWI/SNF relat... 983 7.5e-94 3
UNIPROTKB|F1M6Y4 - symbol:Smarca4 "Transcription activato... 983 9.9e-94 2
UNIPROTKB|D4AA07 - symbol:Smarca4 "Transcription activato... 941 1.0e-93 2
FB|FBgn0000212 - symbol:brm "brahma" species:7227 "Drosop... 981 2.7e-93 3
UNIPROTKB|E2RJ89 - symbol:SMARCA4 "Uncharacterized protei... 975 4.6e-93 2
MGI|MGI:88192 - symbol:Smarca4 "SWI/SNF related, matrix a... 974 5.0e-93 3
UNIPROTKB|A7Z019 - symbol:SMARCA4 "Transcription activato... 974 5.9e-93 3
RGD|621728 - symbol:Smarca4 "SWI/SNF related, matrix asso... 974 6.3e-93 3
UNIPROTKB|G3V790 - symbol:Smarca4 "SWI/SNF related, matri... 974 6.4e-93 3
ZFIN|ZDB-GENE-030605-1 - symbol:smarca4 "SWI/SNF related,... 961 1.3e-91 4
WB|WBGene00004204 - symbol:swsn-4 species:6239 "Caenorhab... 951 1.5e-91 2
UNIPROTKB|F1MJ46 - symbol:SMARCA4 "Transcription activato... 951 2.5e-90 2
SGD|S000001388 - symbol:STH1 "ATPase component of the RSC... 913 4.1e-89 2
CGD|CAL0005444 - symbol:SNF2 species:5476 "Candida albica... 902 1.0e-88 3
UNIPROTKB|Q5AM49 - symbol:SNF2 "Putative uncharacterized ... 902 1.0e-88 3
POMBASE|SPAC1250.01 - symbol:snf21 "ATP-dependent DNA hel... 894 1.4e-88 2
CGD|CAL0003962 - symbol:orf19.239 species:5476 "Candida a... 900 1.6e-88 3
SGD|S000005816 - symbol:SNF2 "Catalytic subunit of the SW... 919 1.7e-88 2
UNIPROTKB|P51532 - symbol:SMARCA4 "Transcription activato... 935 2.6e-88 3
UNIPROTKB|Q9HBD4 - symbol:SMARCA4 "SMARCA4 isoform 2" spe... 935 1.1e-87 3
DICTYBASE|DDB_G0271052 - symbol:snf2b "SNF2-related prote... 929 1.2e-87 3
ASPGD|ASPL0000042729 - symbol:AN2278 species:162425 "Emer... 904 3.2e-87 3
POMBASE|SPCC1620.14c - symbol:snf22 "ATP-dependent DNA he... 901 3.1e-84 3
DICTYBASE|DDB_G0285205 - symbol:snf2a "SNF2-related prote... 840 3.6e-80 4
UNIPROTKB|H0YJG4 - symbol:CHD8 "Chromodomain-helicase-DNA... 684 8.7e-68 3
GENEDB_PFALCIPARUM|PF11_0053 - symbol:PF11_0053 "PfSNF2L"... 740 2.7e-67 2
UNIPROTKB|Q8IIW0 - symbol:PF11_0053 "PfSNF2L" species:363... 740 2.7e-67 2
TAIR|locus:2062999 - symbol:BRM "AT2G46020" species:3702 ... 696 3.3e-67 3
RGD|2323132 - symbol:LOC100359912 "SWI/SNF-related matrix... 689 3.4e-67 2
UNIPROTKB|I3LTT5 - symbol:SMARCA1 "Uncharacterized protei... 694 8.3e-67 1
TAIR|locus:2182978 - symbol:CHR17 "chromatin remodeling f... 696 1.2e-65 2
FB|FBgn0011604 - symbol:Iswi "Imitation SWI" species:7227... 697 1.3e-65 2
UNIPROTKB|E1C0M8 - symbol:SMARCA5 "Uncharacterized protei... 704 6.0e-65 3
ZFIN|ZDB-GENE-021125-1 - symbol:smarca5 "SWI/SNF related,... 696 1.4e-64 2
MGI|MGI:1935129 - symbol:Smarca5 "SWI/SNF related, matrix... 695 1.6e-64 2
DICTYBASE|DDB_G0280705 - symbol:DDB_G0280705 "CHR group p... 706 3.1e-64 3
UNIPROTKB|K7GNV1 - symbol:SMARCA1 "Uncharacterized protei... 694 6.5e-64 2
RGD|1308832 - symbol:Smarca5 "SWI/SNF related, matrix ass... 695 8.6e-64 2
UNIPROTKB|F1N052 - symbol:SMARCA5 "Uncharacterized protei... 696 1.1e-63 2
UNIPROTKB|E2QWV0 - symbol:SMARCA5 "Uncharacterized protei... 696 1.1e-63 2
UNIPROTKB|F1RRG9 - symbol:SMARCA5 "Uncharacterized protei... 696 1.1e-63 2
DICTYBASE|DDB_G0292948 - symbol:isw "CHR group protein" s... 689 1.1e-63 2
CGD|CAL0005422 - symbol:ISW2 species:5476 "Candida albica... 684 1.2e-63 1
UNIPROTKB|Q5A310 - symbol:ISW2 "Putative uncharacterized ... 684 1.2e-63 1
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 658 1.4e-63 2
UNIPROTKB|O60264 - symbol:SMARCA5 "SWI/SNF-related matrix... 695 1.4e-63 2
TAIR|locus:2173644 - symbol:CHR1 "chromatin remodeling 1"... 663 1.6e-63 1
GENEDB_PFALCIPARUM|PFB0730w - symbol:PFB0730w "DNA helica... 491 2.6e-63 3
UNIPROTKB|O96239 - symbol:PFB0730w "DEAD/DEAH box helicas... 491 2.6e-63 3
UNIPROTKB|G4NCV5 - symbol:MGG_01012 "ISWI chromatin-remod... 696 3.1e-63 2
SGD|S000005831 - symbol:ISW2 "ATP-dependent DNA transloca... 682 7.5e-63 2
MGI|MGI:1935127 - symbol:Smarca1 "SWI/SNF related, matrix... 688 1.1e-62 2
UNIPROTKB|F1PWD8 - symbol:CHD7 "Uncharacterized protein" ... 656 2.0e-62 5
UNIPROTKB|F1P3Q4 - symbol:SMARCA1 "Uncharacterized protei... 680 2.8e-62 2
UNIPROTKB|E2QVR5 - symbol:SMARCA1 "Uncharacterized protei... 678 5.3e-62 2
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc... 663 4.8e-61 2
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei... 668 7.3e-61 2
POMBASE|SPAC1783.05 - symbol:hrp1 "ATP-dependent DNA heli... 674 7.7e-61 2
SGD|S000000449 - symbol:ISW1 "ATPase subunit of imitation... 671 7.9e-61 3
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc... 663 1.0e-60 2
ZFIN|ZDB-GENE-030131-6320 - symbol:chd8 "chromodomain hel... 692 1.2e-60 2
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei... 664 1.7e-60 2
UNIPROTKB|B5DE69 - symbol:chd8 "Chromodomain-helicase-DNA... 674 1.7e-60 2
UNIPROTKB|K7GLQ2 - symbol:SMARCA1 "Uncharacterized protei... 664 2.0e-60 2
WB|WBGene00002169 - symbol:isw-1 species:6239 "Caenorhabd... 669 3.1e-60 3
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 650 3.4e-60 3
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 642 4.9e-60 2
FB|FBgn0086902 - symbol:kis "kismet" species:7227 "Drosop... 638 5.2e-60 4
ZFIN|ZDB-GENE-070705-296 - symbol:si:dkey-148b12.1 "si:dk... 650 5.3e-60 3
UNIPROTKB|E1BPM4 - symbol:CHD7 "Uncharacterized protein" ... 656 8.8e-60 5
RGD|1561046 - symbol:Smarca1 "SWI/SNF related, matrix ass... 659 9.5e-60 2
MGI|MGI:2444748 - symbol:Chd7 "chromodomain helicase DNA ... 657 9.7e-60 5
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 640 1.0e-59 2
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 640 1.1e-59 2
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 642 1.1e-59 2
FB|FBgn0250786 - symbol:Chd1 "Chromodomain-helicase-DNA-b... 662 1.5e-59 2
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 641 1.7e-59 2
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 624 3.8e-59 3
UNIPROTKB|F1NVT7 - symbol:CHD6 "Uncharacterized protein" ... 646 4.0e-59 1
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 624 5.1e-59 2
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 624 5.1e-59 2
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 624 6.5e-59 2
TAIR|locus:2041644 - symbol:CHR5 "chromatin remodeling 5"... 641 6.6e-59 2
MGI|MGI:1915022 - symbol:Chd8 "chromodomain helicase DNA ... 683 7.2e-59 3
UNIPROTKB|F1MLB2 - symbol:CHD8 "Uncharacterized protein" ... 687 8.1e-59 5
WARNING: Descriptions of 498 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 2272 (804.8 bits), Expect = 4.4e-256, Sum P(5) = 4.4e-256
Identities = 518/959 (54%), Positives = 608/959 (63%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
+E+IVHQKFNVLLTTYEYLMNKHDRPKLSKI WHYIIIDEGHRIKNASCKLNADLKHY S
Sbjct: 846 KEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVS 905
Query: 75 SHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXX 134
SHRLLLTGTP IFNSSEDFSQWFNKPF+SNG++S +
Sbjct: 906 SHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEE 965
Query: 135 XXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSIG 194
IINRLHQVLRPFVLRRLKHKVENELPEKIERL+RCEASAYQKLLMKRVE+NLGSIG
Sbjct: 966 ENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRVEDNLGSIG 1025
Query: 195 NSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKL 254
N+K R+VHNSVMELRNICNHPYLSQLH+EEV+ +IPKH+LPPIVRLCGKLEMLDR+LPKL
Sbjct: 1026 NAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKL 1085
Query: 255 KATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIF 314
KATDHRVLFFSTMTRLLDVMEDYLT K Y+YLRLDG TSGGDRGALID FN+ SPFFIF
Sbjct: 1086 KATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIF 1145
Query: 315 LLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEE 374
LLSIRAGGVGVNLQAADTVI+FDTDWNPQVDLQAQARAHRIGQK+DVLVLRFETV +VEE
Sbjct: 1146 LLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEE 1205
Query: 375 QVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXX 434
QVRASAEHKLGVANQSITAGFFDNNTSAEDR+EYLESLLRE KKEE
Sbjct: 1206 QVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLESLLRESKKEEDAPVLDDDALNDLI 1265
Query: 435 XRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDG-EPLPPLPSRLVTDDDLKALYEAM 493
R ESEID+FES+DKQR+E EM TW L+ G G+D +P +PSRLVT+DDLK LYE M
Sbjct: 1266 ARRESEIDIFESIDKQRKENEMETWNTLVHGPGSDSFAHIPSIPSRLVTEDDLKLLYETM 1325
Query: 494 KIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAES 553
K+ D P VG+KRK +G LDT YGRGKRAREVRSYEE+ TEEEFEK+CQ ES
Sbjct: 1326 KLNDVPMVAKESTVGMKRKDGSMGGLDTHQYGRGKRAREVRSYEEKLTEEEFEKLCQTES 1385
Query: 554 SDSPKLKEEGLEKSLPTVVSSSAPAVYSTEXXXXXXXXXXXXXXXXX-----XXXSKEVT 608
DSP+ K EG E+SL +S+ P S++ KE T
Sbjct: 1386 PDSPQGKGEGSERSLAND-TSNIPVENSSDTLLPTSPTQAITVQPMEPVRPQSHTLKEET 1444
Query: 609 PPSKXXXXXXXXADKSPVPVVLPAPSGTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXA 668
P K DK+ PV L A S T TG + S++A+ A
Sbjct: 1445 QPIKRGRGRPKRTDKALTPVSLSAVSRT------QATGNAISSAATGLDFVSSDKRLEAA 1498
Query: 669 QHVMVGIAPSSQPTTAFVPVAPGSQSASACPS-TPMQPKGRGRRIQSGEQVPRRRGKKIG 727
H +A +S + P PG QS A P+ TP++ +GRGR G RG+++
Sbjct: 1499 SHPTSSLALTSPDLSG--P--PGFQSLPASPAPTPIRGRGRGRSRGRGAG----RGRRVE 1550
Query: 728 LVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVK 787
VL ++ I + + T+ +E+ + S + VS +P A + +P V
Sbjct: 1551 GVLHGSNSSI-TQRTETATSLASDAEATKFALPRSASEI--VSRVPKANEGSTSNPDQVS 1607
Query: 788 G-QSGTIDPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQS--GGVTP 844
S T S AA + +L+ + K + K + GV+
Sbjct: 1608 PVHSATTALRSDKAA-DKDLDAPPGFDSGSHVQTLNVLENSSERKAFAVKKRPLIQGVSS 1666
Query: 845 RRRG-KRQALGSPPISD---VSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSN 900
+ G +Q L P + + GP N S G SKS S G+ Q ++
Sbjct: 1667 QHPGPNKQPLDLPVSTSSTLLGGGPVQNQNAVSSVCDG----SKSPSEGRTYTALQGVTT 1722
Query: 901 KIQVQPCGVATS-ADVAGP-DQKPAEQSVRVVQSNQP---INLPATHDSSSQPS-GSTP 953
+++ +D P +P +V ++N P LPA + PS G TP
Sbjct: 1723 APSDATLPMSSQPSDATLPMSSQPVGSTVEAQEANVPSLPAALPAKRRVRNLPSRGETP 1781
Score = 119 (46.9 bits), Expect = 4.4e-256, Sum P(5) = 4.4e-256
Identities = 85/383 (22%), Positives = 146/383 (38%)
Query: 1117 SQNKSRDSFGSKTISLRSKQETADVNDVARVMKEIFSETCSSKAKTGDSSLNEGKDXXXX 1176
SQ RD+ G+ ++++TADV DVARVMKEIFSET K K G+ S +
Sbjct: 1848 SQEIRRDTSGTGG---SARKQTADVTDVARVMKEIFSETSLLKHKVGEPSATTRTNVPDA 1904
Query: 1177 XXXXXXXXXEVAKKQSSDD---KTCSVTPTVETPPPGFNS-PNENPGELTGTKNDASVRG 1232
V ++ D K + + P+ PG+LT SV
Sbjct: 1905 QSPGEMNLHTVETHKAEDSSGLKNQEALYNLSKADKLVSDIPHPVPGDLT---TSGSVAN 1961
Query: 1233 DHTPVSGHTLASKTEALK-PENKAQAGRIE-NIANSSPDDKSLPMVPNLETAPPGFDIPI 1290
+ +A++ E +K P + I+ ++ N+ SL TA +
Sbjct: 1962 KDVDIGSSKVAAENELVKIPGGDVDSSVIQLSLGNTLTAKSSLEKC----TAD---QLLG 2014
Query: 1291 EKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVT 1350
EK +++ + P GE ++ E +S E + S+ +K S
Sbjct: 2015 EKLSQEG--ETTPASDGETCHLAEETASSLSYVRSEPTASASTTAEPLPTDKLEKNISFQ 2072
Query: 1351 PAMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEK 1410
++T G + T +++K++ + L EV P DG SV+
Sbjct: 2073 DEVKTLNGDKREAILLSSEEQTNVNSKIETNSEELQASRTD---EV--PH--VDGKSVDV 2125
Query: 1411 LEDTVDD----HSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPL----ETPLIMKSTE 1462
TV + HS+ + PD ++ G++S D + L E + + +
Sbjct: 2126 ANQTVKEDEAKHSVEIQSSMLEPD--ELPNAGQKGHSSIDLQPLVLVTSNENAMSLDDKD 2183
Query: 1463 GPSVSMKADDVADHSRETPILSG 1485
+S K+ D+ E+ + G
Sbjct: 2184 YDPIS-KSADIEQDPEESVFVQG 2205
Score = 98 (39.6 bits), Expect = 2.4e-254, Sum P(4) = 2.4e-254
Identities = 137/679 (20%), Positives = 248/679 (36%)
Query: 1795 DNPEGGVIVPEHKSENMGEKDDI-SSEHAFGSSLVLQDKASEAEIGDRI--DEP-QVDGF 1850
D P G IVPE N+ E D+ +S H +V+ ++ E + + D P Q D
Sbjct: 2650 DIPPVGGIVPE----NLQEIVDVPASPHGVVPDVVVS-QSEEIQSPSILPDDVPGQPDDG 2704
Query: 1851 SPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKID------- 1903
+ M + + + G G + P + E L + E+ D
Sbjct: 2705 NCEKMDTMQNNTSIDIGITSGKTCQPSSSTQPEDENRNSLSHCEPSEVVEQRDSRDQVCI 2764
Query: 1904 GSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSDFCQPS--SSLAPWEAKIDGS 1961
GS++ + + +LE+ I QS +V +++ + +P S+ D
Sbjct: 2765 GSVESQVEISSAILENRSADIQPP----QSILVDQKDIEESKEPGIESADVSLHQLADIQ 2820
Query: 1962 SEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEK-DP 2020
+E + Q +E SKE E+ D + + + + P + + T + K G+E D
Sbjct: 2821 AEPSNLVDQMDIEESKEPGTESAD-VSLHQLADIQPGPSILVDQMDTEKSKEPGTESADV 2879
Query: 2021 DSSFAAQEDPKESVVEAGDQMGVSLG---GATVMEKSSEDLAT--PPLSLANEEEMIEGF 2075
A P S++ DQM G + S LA P S+ ++ E F
Sbjct: 2880 SLHQLADIQPGPSILV--DQMDTEKSKEPGTESADVSLHQLADIQPGPSILVDQMDTEEF 2937
Query: 2076 DNDPTGISMAVMDSKECAAEAADQMCVSEGCVVVTEKLSEDLGLNXXXXXXXXXXXXXXX 2135
N + + D + + +A Q + + E +L ++
Sbjct: 2938 KNPDVSLHQ-LADIEPSLSISAVQKNIEDKDQSHVETAGSEL-VDVSAECSTEPQVQLPP 2995
Query: 2136 XXDPVNSS-VTVEDSKG-FEAEACD---QLHVLRGGGVVAETVQEEEKTELSCEKQPIGS 2190
+PV V + SK AE D L ++ E + L+ ++ I
Sbjct: 2996 SSEPVGDMHVHLGASKSEIVAEGTDFSSSLPKTEEENAKSQLADTEPSSSLTAVQKNIED 3055
Query: 2191 SVDDE-------SKGPEVEPCVQMDVRGDGIVPETV--PEEL---GLPSSPMVVXXXXXX 2238
V+ S G EP VQ+ + +V E P L G+ +S ++
Sbjct: 3056 QVETAGCEFVVVSTGCSTEPQVQLPPSAEPVVAEGTEFPSSLLMTGVDNSSHLMTGVDNA 3115
Query: 2239 XXXXXXPSASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEG 2298
SS P K +A+ + + G G + D+ L SS+ + + +
Sbjct: 3116 KTHLADVVPSSSPTTMEKNIEAQDQDQVTTGGCGLV------DV-LTECSSEPQLQ-LPP 3167
Query: 2299 FSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEE 2358
++PV SE +A+ +PL E + D+++++ VV + + E
Sbjct: 3168 SAEPVISEGTELAT-LPLTEEENADSQLANIEPSSSPSVVEKNIEAQDQDQVKTAGCELV 3226
Query: 2359 KNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAEDKT 2418
CS EP V S EP+ + + + ++ EG PS V E
Sbjct: 3227 STGCSS-EP---QVHLPPSAEPDGDIHVHLKETEKSESMVVVGEGTAFPSSLPVTEEGNA 3282
Query: 2419 ENEIEE-DPVVNSVAVEES 2436
E+++ + +P + VE++
Sbjct: 3283 ESQLADTEPFTSPTVVEKN 3301
Score = 97 (39.2 bits), Expect = 4.4e-256, Sum P(5) = 4.4e-256
Identities = 106/460 (23%), Positives = 183/460 (39%)
Query: 1707 EVLCGGTG--DKKADCKMEPDCL-------VASDSVNMELVPRDFGVGRRDGDIEIFNME 1757
+V GG G D +C EP V S+ + +P + D ++ N+E
Sbjct: 3142 QVTTGGCGLVDVLTECSSEPQLQLPPSAEPVISEGTELATLPL---TEEENADSQLANIE 3198
Query: 1758 GGPSNALLSSSKDIIAE------SAKADVV---LDEHGKVQLLPGADNPEGGVIVPEHKS 1808
PS++ K+I A+ +A ++V +V L P A+ P+G + V ++
Sbjct: 3199 --PSSSPSVVEKNIEAQDQDQVKTAGCELVSTGCSSEPQVHLPPSAE-PDGDIHVHLKET 3255
Query: 1809 ENMGEKDDISSEHAFGSSL-VLQDKASEAEIGDRIDEPQVDGFSPRSMS-GVVD-ELVDE 1865
E + AF SSL V ++ +E+++ D EP SP + + D E V+
Sbjct: 3256 EKSESMVVVGEGTAFPSSLPVTEEGNAESQLADT--EPFT---SPTVVEKNIKDQEQVET 3310
Query: 1866 AG-----DHMGVSHSP-VHVVEREKSEELGLPSLSSATKEEKIDGSL---DKDPDSNLVV 1916
G D G S P V + + E L K E + + D DP +L+V
Sbjct: 3311 TGCGLVDDSTGCSSEPQVQLPPSAEPMEGTHMHLEETKKSETVVTEIQLADIDPSFSLIV 3370
Query: 1917 LEDSKGSIGDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSV-LEG 1975
++ + I DQ D ++G N+ C E +I SS +P + LE
Sbjct: 3371 VQTN---IEDQ-DQIETGGCDLINVPSGCST-------EPQIQLSSSAEPEEGMHIHLEA 3419
Query: 1976 S--KETVAEAGDQMDISIMPEKLPEHLD-----IPASLATPEEKTEGSEKDP-------- 2020
+ ETV G ++ S+ P E+ D + S++ E+T EKD
Sbjct: 3420 AMNSETVVTEGSELPSSL-PMTEDENADGQLAEVEPSVSLTVEQTNIEEKDHIETAECEL 3478
Query: 2021 -DSSFAAQEDPKESVVEAGDQMG-VSLGGATVM-EKSSEDLATPPLSLANEEEMIEGFDN 2077
D S P+ + D +G + + TV+ E + + + P + E + D
Sbjct: 3479 VDVSPGCSSQPEVKFPPSPDAVGGMDVHLETVVTEDTDSNSSLPKTEEKDAENPSDRLDG 3538
Query: 2078 DPTGISMAVMDSKECAAEAADQMCVSEGCVVVTEKLSEDL 2117
+ G ++A ++ C + V+E + K +ED+
Sbjct: 3539 ESDGTTVATVEGT-CVESNS---LVAEESNIEVPKDNEDV 3574
Score = 96 (38.9 bits), Expect = 3.9e-254, Sum P(4) = 3.9e-254
Identities = 134/624 (21%), Positives = 232/624 (37%)
Query: 1853 RSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPD- 1911
R G D +++ D + V E+EK+ + +P + T+++ + D+ P
Sbjct: 2208 RPKVGTADTQMEDTNDAKLLVGCSVESEEKEKTLQSLIPGDDADTEQDPEESVSDQRPKV 2267
Query: 1912 -SNLVVLEDSKGSIGDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQ 1970
S +ED+ D+ V E Q S P + D +EK+P S
Sbjct: 2268 GSAYTQMEDT-----DEAKLLMGCSVESEEKEKTLQ---SHIPGD---DADTEKNPEESV 2316
Query: 1971 SVLEGSKETVAEAGDQM----DISIMP--EKLPEHLDIPASLATPEEKTEGSEKDPDSSF 2024
SV + V QM D ++ E + P + + +E++P+ S
Sbjct: 2317 SVQGVDRPKVGTTDTQMEDTNDAKLLVGCSVASEEKEKTLQSHIPGDDAD-TEQNPEESV 2375
Query: 2025 AAQ--EDPK----ESVVEAGDQMGVSLGGATVMEKSSEDLATP-PLSLA----NEEEMIE 2073
+ Q PK + +E D+ V +G + E+ + L + P A N EE +
Sbjct: 2376 SVQGVNRPKVGNANTQMEDTDEAKVLVGCSVESEEKEKTLQSHIPGDDADTEQNPEESVS 2435
Query: 2074 GFDNDPTGISMAVMDSKECAAEAADQMCVSEGCV--VVTEKLSEDLGLNXXXXXXXXXXX 2131
FD G + M+ + A SE + + S+D L+
Sbjct: 2436 NFDRPKDGTADTHMEDIDDAKLLVGCSVESEEKEKSLQSHMPSDDAVLHAPFENTKDSKG 2495
Query: 2132 XXXXXXDPVNS-SVTVEDSKGFEAEA---CDQLHVLRGGGVVAETVQEEEKTELSCEKQP 2187
V+ ++ V + KGFE+E D + RG V +E + + K +S + P
Sbjct: 2496 DDLHGESLVSCPTMEVMEQKGFESETHARTDSGGIDRGNEV-SENMSDGVKMNISSVQVP 2554
Query: 2188 IGSSVDDESKGPEVEPCVQMDVRGDGIVPETVPEELGLPSSPMVVXXXXXXXXXXXXPSA 2247
S + S+ P V GI PE V E + +P+SP S
Sbjct: 2555 DASHDLNVSQDQTDIPLV------GGIDPEHVQENVDVPASPHGAAPNIVIFQSEGHLSP 2608
Query: 2248 SSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGS-E 2306
S +P D A + E N +T +P S D++ + + PVG
Sbjct: 2609 SILP-------DDVAGQL---ESMSNDEKTNISSEQVPDVSHDLKVSQDQTDIPPVGGIV 2658
Query: 2307 KESIASAVPLDESK-G--PDAEVSSQTAIEGGGVVSIPVPEEAD-GPASFLAAEEEKNEC 2362
E++ V + S G PD VS I+ ++ VP + D G + +
Sbjct: 2659 PENLQEIVDVPASPHGVVPDVVVSQSEEIQSPSILPDDVPGQPDDGNCEKMDTMQNNTSI 2718
Query: 2363 -----SDKEPVGSSVSQIESKEPEAKAF-EPMDVVDGAVALENTSEGMGGPSPPL--VIA 2414
S K SS +Q E + + + EP +VV+ + + G + I
Sbjct: 2719 DIGITSGKTCQPSSSTQPEDENRNSLSHCEPSEVVEQRDSRDQVCIGSVESQVEISSAIL 2778
Query: 2415 EDKTEN-EIEEDPVVNSVAVEESK 2437
E+++ + + + +V+ +EESK
Sbjct: 2779 ENRSADIQPPQSILVDQKDIEESK 2802
Score = 94 (38.1 bits), Expect = 4.4e-256, Sum P(5) = 4.4e-256
Identities = 115/499 (23%), Positives = 189/499 (37%)
Query: 1730 SDSVNMEL----VP---RDFGVGRRDGDIEIFNMEGGPSNALLSSSKDIIAE--SAKADV 1780
SD V M + VP D V + DI + GG + + D+ A A ++
Sbjct: 2541 SDGVKMNISSVQVPDASHDLNVSQDQTDIPLV---GGIDPEHVQENVDVPASPHGAAPNI 2597
Query: 1781 VL---DEHGKVQLLPGADNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAE 1837
V+ + H +LP D+ G + +S + EK +ISSE S L K S+
Sbjct: 2598 VIFQSEGHLSPSILP--DDVAGQL-----ESMSNDEKTNISSEQVPDVSHDL--KVSQ-- 2646
Query: 1838 IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPS-LSSA 1896
D+ D P V G P ++ +VD A H GV P VV + SEE+ PS L
Sbjct: 2647 --DQTDIPPVGGIVPENLQEIVDV---PASPH-GVV--PDVVVSQ--SEEIQSPSILPDD 2696
Query: 1897 TKEEKIDGSLDK-DPDSNLVVLEDSKGSIGDQMDCCQSGVVVPE----NLSDFCQPSSSL 1951
+ DG+ +K D N ++ I C S PE N C+PS +
Sbjct: 2697 VPGQPDDGNCEKMDTMQNNTSIDIG---ITSGKTCQPSSSTQPEDENRNSLSHCEPSEVV 2753
Query: 1952 APWEAKID---GSSEKDPVSSQSVLEGSKETVAEAG----DQMDISIMPEKLPEHLDIPA 2004
+++ GS E S ++LE + DQ DI E E D+
Sbjct: 2754 EQRDSRDQVCIGSVESQVEISSAILENRSADIQPPQSILVDQKDIEESKEPGIESADVSL 2813
Query: 2005 -SLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPL 2063
LA + + D + + + + V + G + ++++ + + P
Sbjct: 2814 HQLADIQAEPSNLVDQMDIEESKEPGTESADVSLHQLADIQPGPSILVDQMDTEKSKEPG 2873
Query: 2064 SLANEEEMIEGFDNDPTGISMAV--MD---SKECAAEAAD----QMC-VSEGCVVVTEKL 2113
+ + + + + D P G S+ V MD SKE E+AD Q+ + G ++ +++
Sbjct: 2874 TESADVSLHQLADIQP-GPSILVDQMDTEKSKEPGTESADVSLHQLADIQPGPSILVDQM 2932
Query: 2114 SEDLGLNXXXXXXXXXXXXXXXXXDPVNSSVTVEDSKGFEAEACDQLHVLRGGGVVAETV 2173
+ N V ++ ED DQ HV G + +
Sbjct: 2933 DTEEFKNPDVSLHQLADIEPSLSISAVQKNI--EDK--------DQSHVETAGSELVDVS 2982
Query: 2174 QE---EEKTELSCEKQPIG 2189
E E + +L +P+G
Sbjct: 2983 AECSTEPQVQLPPSSEPVG 3001
Score = 91 (37.1 bits), Expect = 7.7e-08, Sum P(5) = 7.7e-08
Identities = 42/167 (25%), Positives = 68/167 (40%)
Query: 740 PGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAV 799
PGP+ + + P S S GG VSS+ S + Q T PS A
Sbjct: 1669 PGPNKQPLDLPVSTSSTLLGGGPVQNQNAVSSVCDGSKSPSEGRTYTALQGVTTAPSDAT 1728
Query: 800 AALNSE-------LNTN-LATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQ 851
++S+ +++ + + + K + R S G TP+R+GKR+
Sbjct: 1729 LPMSSQPSDATLPMSSQPVGSTVEAQEANVPSLPAALPAKRRVRNLPSRGETPKRQGKRR 1788
Query: 852 ALGSP-PISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQE 897
G P P +D S+ + Q E G L +K+ K DA+++E
Sbjct: 1789 --GQPLPATDASSARSTGLTPQIEVKVGNLSGTKA----KFDAVAKE 1829
Score = 90 (36.7 bits), Expect = 1.2e-255, Sum P(5) = 1.2e-255
Identities = 91/381 (23%), Positives = 154/381 (40%)
Query: 1718 ADCKMEPDCLVASDSVNMELVPRDFGVGRRDGDI-EIFNMEGGPSNAL--LSSSKDIIAE 1774
AD + EP LV D +++E ++ G D + ++ +++ GPS + + + K
Sbjct: 2817 ADIQAEPSNLV--DQMDIE-ESKEPGTESADVSLHQLADIQPGPSILVDQMDTEKSKEPG 2873
Query: 1775 SAKADVVLDEHGKVQLLPGADNPEGGVIVPE---HKSENMG-EKDDISSEHAF----GSS 1826
+ ADV L + +Q PG P ++V + KS+ G E D+S G S
Sbjct: 2874 TESADVSLHQLADIQ--PG---PS--ILVDQMDTEKSKEPGTESADVSLHQLADIQPGPS 2926
Query: 1827 LVLQDKASEAEIGDRIDEPQVDGFSPR-SMSGVVDELVDEAGDHMGVSHSPVHVVEREKS 1885
+++ +E + Q+ P S+S V + D+ H+ + S + V E S
Sbjct: 2927 ILVDQMDTEEFKNPDVSLHQLADIEPSLSISAVQKNIEDKDQSHVETAGSELVDVSAECS 2986
Query: 1886 EE--LGLPSLSS----------ATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQS 1933
E + LP S A+K E + D E++K + D + S
Sbjct: 2987 TEPQVQLPPSSEPVGDMHVHLGASKSEIVAEGTDFSSSLPKTEEENAKSQLADT-EPSSS 3045
Query: 1934 GVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMP 1993
V +N+ D Q ++ + G S + V L S E V G + S+
Sbjct: 3046 LTAVQKNIED--QVETAGCEFVVVSTGCSTEPQVQ----LPPSAEPVVAEGTEFPSSL-- 3097
Query: 1994 EKLPEHLDIPASLATPEE--KTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVM 2051
L +D + L T + KT ++ P SS E K +EA DQ V+ GG ++
Sbjct: 3098 --LMTGVDNSSHLMTGVDNAKTHLADVVPSSSPTTME--KN--IEAQDQDQVTTGGCGLV 3151
Query: 2052 EKSSEDLATPPLSLANEEEMI 2072
+ +E + P L L E +
Sbjct: 3152 DVLTECSSEPQLQLPPSAEPV 3172
Score = 84 (34.6 bits), Expect = 7.2e-253, Sum P(4) = 7.2e-253
Identities = 92/447 (20%), Positives = 169/447 (37%)
Query: 1961 SSEKDPVSSQSVLEGSKETVAEAGDQMDI----SIMPEKLPEHLDIPASL--ATPEEKTE 2014
+ EK +SS+ V + S + + + DQ DI I+PE L E +D+PAS P+
Sbjct: 2624 NDEKTNISSEQVPDVSHD-LKVSQDQTDIPPVGGIVPENLQEIVDVPASPHGVVPDVVVS 2682
Query: 2015 GSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATV-MEKSSEDLATPPLSLANEEEMIE 2073
SE+ S + P + ++M ++ + +S P S E+E
Sbjct: 2683 QSEEIQSPSILPDDVPGQPDDGNCEKMDTMQNNTSIDIGITSGKTCQPSSSTQPEDENRN 2742
Query: 2074 GFDN-DPTGISMAVMDSKE--CAAEAADQMCVSEGCVVVTEKLSEDLGLNXXXXXXXXXX 2130
+ +P+ + + DS++ C Q+ +S + E S D+
Sbjct: 2743 SLSHCEPSEV-VEQRDSRDQVCIGSVESQVEISSA---ILENRSADI---QPPQSILVDQ 2795
Query: 2131 XXXXXXXDP-VNSS-VTVEDSKGFEAEAC---DQLHV--LRGGGVVAETVQEEEKTELSC 2183
+P + S+ V++ +AE DQ+ + + G + V + ++
Sbjct: 2796 KDIEESKEPGIESADVSLHQLADIQAEPSNLVDQMDIEESKEPGTESADVSLHQLADIQP 2855
Query: 2184 EKQPIGSSVDDE-SKGPEVEPC-VQM----DVR-GDGIVPETVPEELGL-PSSPMVVXXX 2235
+ +D E SK P E V + D++ G I+ + + E P +
Sbjct: 2856 GPSILVDQMDTEKSKEPGTESADVSLHQLADIQPGPSILVDQMDTEKSKEPGTESADVSL 2915
Query: 2236 XXXXXXXXXPS--ASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEE 2293
PS + E K PD + + D E P L + ++E+
Sbjct: 2916 HQLADIQPGPSILVDQMDTEEFKNPDVSLHQLADIE---------PS-LSISAVQKNIED 2965
Query: 2294 EKIEGFSKPVGSEKESIASAVPLDESKG--PDAEVSSQTAIEGGGVVSIPVPEEADGPAS 2351
K + + GSE +++ + P +E + G S V E D +S
Sbjct: 2966 -KDQSHVETAGSELVDVSAECSTEPQVQLPPSSEPVGDMHVHLGASKSEIVAEGTDFSSS 3024
Query: 2352 FLAAEEE--KNECSDKEPVGSSVSQIE 2376
EEE K++ +D EP SS++ ++
Sbjct: 3025 LPKTEEENAKSQLADTEP-SSSLTAVQ 3050
Score = 84 (34.6 bits), Expect = 8.1e-253, Sum P(5) = 8.1e-253
Identities = 35/153 (22%), Positives = 59/153 (38%)
Query: 1072 SVPVKRHGRKTPTTGEAPRRRGKKQGSGPSIPDGSAV--------FDAKLNQHSQNKSRD 1123
++P KR R P+ GE P+R+GK++G D S+ + K+ S K++
Sbjct: 1764 ALPAKRRVRNLPSRGETPKRQGKRRGQPLPATDASSARSTGLTPQIEVKVGNLSGTKAKF 1823
Query: 1124 SFGSKTISLRSKQETADVNDVARVMKEIFSETCSSKAKTGDSSLNEGKDXXXXXXXXXXX 1183
+K S+ D++ + +EI +T TG S+ + D
Sbjct: 1824 DAVAKEQPHFSQSVAPDIHSSGSLSQEIRRDTSG----TGGSARKQTADVTDVARVMKEI 1879
Query: 1184 XXEVAKKQSSDDKTCSVTPTVETPPPGFNSPNE 1216
E + + K + T T P SP E
Sbjct: 1880 FSETSLLKH---KVGEPSATTRTNVPDAQSPGE 1909
Score = 83 (34.3 bits), Expect = 9.2e-253, Sum P(4) = 9.2e-253
Identities = 68/283 (24%), Positives = 115/283 (40%)
Query: 2171 ETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRG-DGIVPETVPEELGLPSSP 2229
E++ +EKT +S E+ P D S +V Q D+ GIVPE + E + +P+SP
Sbjct: 2620 ESMSNDEKTNISSEQVP------DVSHDLKVSQD-QTDIPPVGGIVPENLQEIVDVPASP 2672
Query: 2230 MVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGL----- 2284
V S S +P PD + N E M+ D+G+
Sbjct: 2673 HGVVPDVVVSQSEEIQSPSILPDDVPGQPD-DGN----CEKMDTMQNNTSIDIGITSGKT 2727
Query: 2285 --PLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPV 2342
P SS+ E+E S SE V +S+ S ++ +E +
Sbjct: 2728 CQPSSSTQPEDENRNSLSHCEPSE------VVEQRDSRDQVCIGSVESQVEISSAILENR 2781
Query: 2343 PEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSE 2402
+ P S L +++ E KEP G + + + EP ++VD + +E + E
Sbjct: 2782 SADIQPPQSILVDQKDIEE--SKEP-GIESADVSLHQLADIQAEPSNLVD-QMDIEESKE 2837
Query: 2403 GMGGPSPPLVIAEDKTENEIEEDP--VVNSVAVEESK--GSEA 2441
G S + + + +I+ P +V+ + E+SK G+E+
Sbjct: 2838 P-GTESADVSLHQLA---DIQPGPSILVDQMDTEKSKEPGTES 2876
Score = 78 (32.5 bits), Expect = 1.3e-06, Sum P(5) = 1.3e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 678 SSQPTTAFVPVA--P-GS----QSASACPSTP--MQPKGRGRRIQSGEQVPRRRGKKIGL 728
SSQP+ A +P++ P GS Q A+ PS P + K R R + S + P+R+GK+ G
Sbjct: 1732 SSQPSDATLPMSSQPVGSTVEAQEANV-PSLPAALPAKRRVRNLPSRGETPKRQGKRRGQ 1790
Query: 729 VLPAA-SDDIPSPGPDPK 745
LPA + S G P+
Sbjct: 1791 PLPATDASSARSTGLTPQ 1808
Score = 73 (30.8 bits), Expect = 2.5e-246, Sum P(4) = 2.5e-246
Identities = 80/364 (21%), Positives = 146/364 (40%)
Query: 1237 VSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPM-VPNLETAPPGFDIPIEKHN- 1294
VS H LA ++P +++ + P +S + + L PG I +++ +
Sbjct: 2879 VSLHQLAD----IQPGPSILVDQMDTEKSKEPGTESADVSLHQLADIQPGPSILVDQMDT 2934
Query: 1295 EQSRNQNNP--EVKGEETPVS-SEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTP 1351
E+ +N + ++ E +S S + E +Q V S L D+S++ CS P
Sbjct: 2935 EEFKNPDVSLHQLADIEPSLSISAVQKNIEDKDQSHVETAGS--ELVDVSAE---CSTEP 2989
Query: 1352 AMETAPGF----DIPIEKGVEQSGTEIDAKVKWKNTPLPG-EAIVAGIEVFKPENKTDGD 1406
++ P D+ + G +S EI A+ ++ LP E A ++ E +
Sbjct: 2990 QVQLPPSSEPVGDMHVHLGASKS--EIVAEGTDFSSSLPKTEEENAKSQLADTEPSSSLT 3047
Query: 1407 SVEK-LEDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSE---DSSKMPLETPLIMKSTE 1462
+V+K +ED V+ E + S S +P + + ++ P + L+M +
Sbjct: 3048 AVQKNIEDQVETAGC--EFVVVSTGCSTEPQVQLPPSAEPVVAEGTEFP--SSLLMTGVD 3103
Query: 1463 GPSVSMKA-DDVADHSRET-PILSGSPINSGTE-----------CSTVSVKTDVGNHPQN 1509
S M D+ H + P S + + E C V V T+ + PQ
Sbjct: 3104 NSSHLMTGVDNAKTHLADVVPSSSPTTMEKNIEAQDQDQVTTGGCGLVDVLTECSSEPQL 3163
Query: 1510 VEPTSASPERS-GPQNSAVGFCDKSEIPSMEAEVAKCPSDAIVNNLLETP-LD-IKSIGG 1566
P SA P S G + + + ++ S A + S ++V +E D +K+ G
Sbjct: 3164 QLPPSAEPVISEGTELATLPLTEEENADSQLANIEPSSSPSVVEKNIEAQDQDQVKTAGC 3223
Query: 1567 PIVS 1570
+VS
Sbjct: 3224 ELVS 3227
Score = 72 (30.4 bits), Expect = 1.9e-253, Sum P(5) = 1.9e-253
Identities = 122/534 (22%), Positives = 193/534 (36%)
Query: 1844 EPQVDGFSPRSMSGVVDELVDEAGDHM--GVSHSPVHV---VEREKSEELGL-PSLSSAT 1897
EPQV P S VV E + + GV +S H+ V+ K+ + PS S T
Sbjct: 3074 EPQVQ--LPPSAEPVVAEGTEFPSSLLMTGVDNSS-HLMTGVDNAKTHLADVVPSSSPTT 3130
Query: 1898 KEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCC-QSGVVVPENLSDFCQPSSSLA--PW 1954
E+ I+ D+D V G + +C + + +P + + LA P
Sbjct: 3131 MEKNIEAQ-DQDQ-----VTTGGCGLVDVLTECSSEPQLQLPPSAEPVISEGTELATLPL 3184
Query: 1955 EAKIDGSSEK---DPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEE 2011
+ + S+ +P SS SV+E + EA DQ + +L + S
Sbjct: 3185 TEEENADSQLANIEPSSSPSVVEKN----IEAQDQDQVKTAGCEL---VSTGCSSEPQVH 3237
Query: 2012 KTEGSEKDPDSSFAAQEDPK-ESVVEAGDQMGVSLGGATVMEKSSED-LA-TPPLSLANE 2068
+E D D +E K ES+V G+ E ++E LA T P +
Sbjct: 3238 LPPSAEPDGDIHVHLKETEKSESMVVVGEGTAFPSSLPVTEEGNAESQLADTEPFTSPTV 3297
Query: 2069 -EEMIEGFDN-DPTGISMAVMDSKECAAEAADQMCVSEGCVVVTEKLSEDLGLNXXXXXX 2126
E+ I+ + + TG + V DS C++E Q+ S + T + L
Sbjct: 3298 VEKNIKDQEQVETTGCGL-VDDSTGCSSEPQVQLPPSAEPMEGTH-----MHLEETKKSE 3351
Query: 2127 XXXXXXXXXXXDPVNSSVTV----EDSKGFEAEACDQLHVLRGGGV-----VAETVQEEE 2177
DP S + V ED E CD ++V G ++ + + EE
Sbjct: 3352 TVVTEIQLADIDPSFSLIVVQTNIEDQDQIETGGCDLINVPSGCSTEPQIQLSSSAEPEE 3411
Query: 2178 KTELSCEKQPIGSSVDDE-SKGPEVEPCVQMDVRGDGIVPETVPEELGLPSSPMVVXXXX 2236
+ E +V E S+ P P + D DG + E P + L +
Sbjct: 3412 GMHIHLEAAMNSETVVTEGSELPSSLPMTE-DENADGQLAEVEPS-VSLTVEQTNIEEKD 3469
Query: 2237 XXXXXXXXPSASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKI 2296
+ G S P+ + DA GG D+ L + V E+
Sbjct: 3470 HIETAEC--ELVDVSPGCSSQPEVKFPPSPDAVGG--------MDVHL---ETVVTEDTD 3516
Query: 2297 EGFSKPVGSEKESIASAVPLD-ESKGPDAEVSSQTAIEGGGVVS----IPVPEE 2345
S P EK++ + LD ES G T +E +V+ I VP++
Sbjct: 3517 SNSSLPKTEEKDAENPSDRLDGESDGTTVATVEGTCVESNSLVAEESNIEVPKD 3570
Score = 64 (27.6 bits), Expect = 5.2e-255, Sum P(6) = 5.2e-255
Identities = 69/291 (23%), Positives = 116/291 (39%)
Query: 1804 PEHKSENMGEKD-DISSEHAFGSSLVLQDKASEAEIG-DRIDEPQV-DGFSPRSMSGVVD 1860
P +N+ +D D + G VL + +SE ++ EP + +G ++ +
Sbjct: 3128 PTTMEKNIEAQDQDQVTTGGCGLVDVLTECSSEPQLQLPPSAEPVISEGTELATLPLTEE 3187
Query: 1861 ELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDS 1920
E D ++ S SP VVE+ E + +A E + +P +L +
Sbjct: 3188 ENADSQLANIEPSSSP-SVVEKN-IEAQDQDQVKTAGCE-LVSTGCSSEPQVHLPPSAEP 3244
Query: 1921 KGSIG---DQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGS-SEKDPVSSQSVLEGS 1976
G I + + +S VVV E + F PSS E + ++ +P +S +V+E +
Sbjct: 3245 DGDIHVHLKETEKSESMVVVGEGTA-F--PSSLPVTEEGNAESQLADTEPFTSPTVVEKN 3301
Query: 1977 ---KETVAEAG-----DQMDISIMPE-KLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQ 2027
+E V G D S P+ +LP + E+T+ SE A
Sbjct: 3302 IKDQEQVETTGCGLVDDSTGCSSEPQVQLPPSAEPMEGTHMHLEETKKSETVVTEIQLAD 3361
Query: 2028 EDPKES--VVEAG--DQMGVSLGGATVMEKSSEDLATPPLSLANEEEMIEG 2074
DP S VV+ DQ + GG ++ S P + L++ E EG
Sbjct: 3362 IDPSFSLIVVQTNIEDQDQIETGGCDLINVPSGCSTEPQIQLSSSAEPEEG 3412
Score = 64 (27.6 bits), Expect = 1.6e-243, Sum P(3) = 1.6e-243
Identities = 61/252 (24%), Positives = 97/252 (38%)
Query: 1194 DDKT-CSVTPTVETPPPGFNSPNENPG-ELTGTKNDASV-----RGDHTPVSGHTLASKT 1246
DD T CS P V+ PP P E L TK +V D P S + +T
Sbjct: 3317 DDSTGCSSEPQVQLPPSA--EPMEGTHMHLEETKKSETVVTEIQLADIDP-SFSLIVVQT 3373
Query: 1247 EALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVK 1306
++ +++ + G + I N + P + +A P + I H E + N +
Sbjct: 3374 N-IEDQDQIETGGCDLI-NVPSGCSTEPQIQLSSSAEPEEGMHI--HLEAAMNSETVVTE 3429
Query: 1307 GEETPVS----SEAPASTEAFEQE-KVTNTSSFVNLADLSS-DDKTCS---VTPAMETAP 1357
G E P S + A + E E V+ T N+ + + C V+P + P
Sbjct: 3430 GSELPSSLPMTEDENADGQLAEVEPSVSLTVEQTNIEEKDHIETAECELVDVSPGCSSQP 3489
Query: 1358 GFDIPIEK-GVEQSGTEIDAKVKW---KNTPLPG-EAIVAGIEVFKPENKTDGDSVEKLE 1412
P V ++ V N+ LP E A + + ++DG +V +E
Sbjct: 3490 EVKFPPSPDAVGGMDVHLETVVTEDTDSNSSLPKTEEKDAENPSDRLDGESDGTTVATVE 3549
Query: 1413 DT-VDDHSLVKE 1423
T V+ +SLV E
Sbjct: 3550 GTCVESNSLVAE 3561
Score = 62 (26.9 bits), Expect = 8.1e-253, Sum P(5) = 8.1e-253
Identities = 85/385 (22%), Positives = 157/385 (40%)
Query: 1192 SSDDKTCSVTPTVETPPPGFN-SPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALK 1250
SS+++T +V +ET S + + G D + + + H++ ++ L+
Sbjct: 2089 SSEEQT-NVNSKIETNSEELQASRTDEVPHVDGKSVDVANQTVKEDEAKHSVEIQSSMLE 2147
Query: 1251 PENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEET 1310
P+ AG+ +SS D + L +V + E A D + ++ + + +PE E
Sbjct: 2148 PDELPNAGQK---GHSSIDLQPLVLVTSNENAMSLDDKDYDPISKSADIEQDPE---ESV 2201
Query: 1311 PVSSEA-PASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQ 1369
V P A Q + TN + + + S++K ++ + PG D E+ E+
Sbjct: 2202 FVQGVGRPKVGTADTQMEDTNDAKLLVGCSVESEEKEKTLQSLI---PGDDADTEQDPEE 2258
Query: 1370 SGTEIDAKVKWKNTPLPG--EA-IVAGIEVFKPENKTDGDSVEKLEDTVDDHSLVKEL-I 1425
S ++ KV T + EA ++ G V +S EK E T+ H +
Sbjct: 2259 SVSDQRPKVGSAYTQMEDTDEAKLLMGCSV---------ESEEK-EKTLQSHIPGDDADT 2308
Query: 1426 HRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSG 1485
++P+ S V G D K+ T M+ T + + VA +E + S
Sbjct: 2309 EKNPEESVSVQG-------VDRPKVGT-TDTQMEDTNDAKLLVGCS-VASEEKEKTLQSH 2359
Query: 1486 SP-INSGTECS---TVSV----KTDVGNHPQNVEPTSASPERSG--PQNSAVGFCDKSEI 1535
P ++ TE + +VSV + VGN +E T + G ++ +S I
Sbjct: 2360 IPGDDADTEQNPEESVSVQGVNRPKVGNANTQMEDTDEAKVLVGCSVESEEKEKTLQSHI 2419
Query: 1536 PSMEAEVAKCPSDAIVNNLLETPLD 1560
P +A+ + P +++ N + P D
Sbjct: 2420 PGDDADTEQNPEESVSN--FDRPKD 2442
Score = 58 (25.5 bits), Expect = 4.4e-256, Sum P(5) = 4.4e-256
Identities = 35/128 (27%), Positives = 56/128 (43%)
Query: 858 ISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAG 917
+S V G +S S ++ G+ + S + + + + + QP G A A
Sbjct: 1698 VSSVCDGSKSPSEGRTYTALQGVTTAPSDATLPMSSQPSDATLPMSSQPVGSTVEAQEAN 1757
Query: 918 ----PDQKPAEQSVRVVQSN------------QPINLPATHDSSSQPSGSTPAQVPSMDL 961
P PA++ VR + S QP LPAT SS++ +G TP Q+ + +
Sbjct: 1758 VPSLPAALPAKRRVRNLPSRGETPKRQGKRRGQP--LPATDASSARSTGLTP-QI-EVKV 1813
Query: 962 GNVASDTK 969
GN+ S TK
Sbjct: 1814 GNL-SGTK 1820
Score = 58 (25.5 bits), Expect = 1.0e-239, Sum P(3) = 1.0e-239
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 2246 SASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGS 2305
+ SS+ G SK P +E +G T P D LP+SS + + S+PVGS
Sbjct: 1697 AVSSVCDG-SKSP-SEGRTYTALQGV----TTAPSDATLPMSSQP-SDATLPMSSQPVGS 1749
Query: 2306 EKESIASAVP 2315
E+ + VP
Sbjct: 1750 TVEAQEANVP 1759
Score = 57 (25.1 bits), Expect = 9.0e-243, Sum P(3) = 9.0e-243
Identities = 100/467 (21%), Positives = 165/467 (35%)
Query: 1304 EVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPI 1363
+V +P + E + EA +Q++VT L D+ ++ CS P ++ P + I
Sbjct: 3121 DVVPSSSPTTMEK--NIEAQDQDQVTTGGC--GLVDVLTE---CSSEPQLQLPPSAEPVI 3173
Query: 1364 EKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLE-DTVDDHSLVK 1422
+G E + + + + E + V K D D V+ + V +
Sbjct: 3174 SEGTELATLPLTEEENADSQLANIEPSSSPSVVEKNIEAQDQDQVKTAGCELVSTGCSSE 3233
Query: 1423 ELIHRSPD-HSDMVIGNVPGNTSEDSSKMPL-----ETPLIMKSTE-GPSVSMKADDVAD 1475
+H P D I +V +E S M + P + TE G + S AD
Sbjct: 3234 PQVHLPPSAEPDGDI-HVHLKETEKSESMVVVGEGTAFPSSLPVTEEGNAESQLADTEPF 3292
Query: 1476 HSR---ETPILSGSPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDK 1532
S E I + + T C V T + PQ P SA P + + K
Sbjct: 3293 TSPTVVEKNIKDQEQVET-TGCGLVDDSTGCSSEPQVQLPPSAEPMEGTHMH--LEETKK 3349
Query: 1533 SEIPSMEAEVAKC-PSDA--IVNNLLETPLDIKSIGGPIVSMKAADVADADHPLETAVE- 1588
SE E ++A PS + +V +E I++ G ++++ + + L ++ E
Sbjct: 3350 SETVVTEIQLADIDPSFSLIVVQTNIEDQDQIETGGCDLINVPSGCSTEPQIQLSSSAEP 3409
Query: 1589 -------LGSPVNSCTVEPXXXXXXXXXXXXXXXXLDNPLS-IE-GIGLSVSAKTDDVAD 1639
L + +NS TV D L+ +E + L+V + D
Sbjct: 3410 EEGMHIHLEAAMNSETVVTEGSELPSSLPMTEDENADGQLAEVEPSVSLTVEQTNIEEKD 3469
Query: 1640 HPVEPPGCDKSDXXXXXXXXXXXXXXXXXXXQVLTKALDVGIALDKTEIATSCDTASLDD 1699
H +E C+ D +DV + TE S + +
Sbjct: 3470 H-IETAECELVDVSPGCSSQPEVKFPPSPDA---VGGMDVHLETVVTEDTDSNSSLPKTE 3525
Query: 1700 SHDNGNVEVLCGGTGDKKADCKMEPDC-----LVASDSVNMELVPRD 1741
D N G D +E C LVA +S N+E VP+D
Sbjct: 3526 EKDAENPSDRLDGESDGTTVATVEGTCVESNSLVAEES-NIE-VPKD 3570
Score = 56 (24.8 bits), Expect = 6.4e-250, Sum P(4) = 6.4e-250
Identities = 104/452 (23%), Positives = 169/452 (37%)
Query: 2000 LDI-PASLATPEEKT---EGSEKDPDSSFA-AQEDPKESVVEAGDQMG-VSLGGA-TVME 2052
+D+ P L T E + + DP S A ++DP+ESV G +G +G A T ME
Sbjct: 2162 IDLQPLVLVTSNENAMSLDDKDYDPISKSADIEQDPEESVFVQG--VGRPKVGTADTQME 2219
Query: 2053 KSSEDLATPPLSLANEEE------MIEGFDNDPT-GISMAVMDSKECAAEAADQMCVSE- 2104
+++ S+ +EE+ +I G D D +V D + A QM ++
Sbjct: 2220 DTNDAKLLVGCSVESEEKEKTLQSLIPGDDADTEQDPEESVSDQRPKVGSAYTQMEDTDE 2279
Query: 2105 -----GCVVVTEKLSEDLGLNXXXXXXXXXXX-XXXXXXDPVNS-SVTVEDSKGFEAEAC 2157
GC V +E+ + L + V+ V D+ + E
Sbjct: 2280 AKLLMGCSVESEEKEKTLQSHIPGDDADTEKNPEESVSVQGVDRPKVGTTDT---QMEDT 2336
Query: 2158 DQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVPE 2217
+ +L G V +E E+EKT S P G D E + PE VQ R
Sbjct: 2337 NDAKLLVGCSVASE---EKEKTLQS--HIP-GDDADTE-QNPEESVSVQGVNRPKVGNAN 2389
Query: 2218 TVPEELGLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAEGGGNMRQT 2277
T E+ V+ S IP ++ D E N E N +
Sbjct: 2390 TQMEDT---DEAKVLVGCSVESEEKEKTLQSHIPGDDA---DTEQN---PEESVSNFDR- 2439
Query: 2278 VPQDLGLPLSSSDVEEEKI-EGFSKPVGSEKESIASAVPLDES--KGP--DAEVSSQTAI 2332
P+D D+++ K+ G S +++S+ S +P D++ P + + S +
Sbjct: 2440 -PKDGTADTHMEDIDDAKLLVGCSVESEEKEKSLQSHMPSDDAVLHAPFENTKDSKGDDL 2498
Query: 2333 EGGGVVSIPVPE--EADGPASFLAAEEEK------NECSDK--EPVGSSVSQIESKEPEA 2382
G +VS P E E G S A + NE S+ + V ++S ++ +
Sbjct: 2499 HGESLVSCPTMEVMEQKGFESETHARTDSGGIDRGNEVSENMSDGVKMNISSVQVPDASH 2558
Query: 2383 KAFEPMDVVD----GAVALENTSEGMGGPSPP 2410
D D G + E+ E + P+ P
Sbjct: 2559 DLNVSQDQTDIPLVGGIDPEHVQENVDVPASP 2590
Score = 56 (24.8 bits), Expect = 7.2e-250, Sum P(5) = 7.2e-250
Identities = 43/161 (26%), Positives = 62/161 (38%)
Query: 893 ALSQELSNKIQVQP---CGVATSADVAGPDQKPAEQSVRV-VQSNQPINLPATHDSSSQP 948
A S L+ +I+V+ G D +Q QSV + S+ ++ D+S
Sbjct: 1800 ARSTGLTPQIEVKVGNLSGTKAKFDAVAKEQPHFSQSVAPDIHSSGSLSQEIRRDTSGT- 1858
Query: 949 SGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNI---QSFEEK 1005
GS Q + D+ +VA KE+ SE S K V A R N+ QS E
Sbjct: 1859 GGSARKQ--TADVTDVARVMKEIFSETSLLKHKV------GEPSATTRTNVPDAQSPGEM 1910
Query: 1006 ACTNASKSKAT-LPALDSITEPYTGSTNTEGISNTIHHVPG 1045
KA L + Y S + +S+ H VPG
Sbjct: 1911 NLHTVETHKAEDSSGLKNQEALYNLSKADKLVSDIPHPVPG 1951
Score = 54 (24.1 bits), Expect = 5.8e-245, Sum P(4) = 5.8e-245
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 914 DVAG-PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGST 952
DV G PD E+ + +Q+N I++ T + QPS ST
Sbjct: 2696 DVPGQPDDGNCEK-MDTMQNNTSIDIGITSGKTCQPSSST 2734
Score = 54 (24.1 bits), Expect = 1.9e-242, Sum P(3) = 1.9e-242
Identities = 18/84 (21%), Positives = 37/84 (44%)
Query: 2362 CSDKEPVGSSVSQIESKEPEAKAF---EPM--DVVDGAVALENTSEGMGGPSPPLVIAED 2416
C E SS+S + S EP A A EP+ D ++ ++ ++ + + G ++
Sbjct: 2032 CHLAEETASSLSYVRS-EPTASASTTAEPLPTDKLEKNISFQDEVKTLNGDKREAILLSS 2090
Query: 2417 KTENEIEEDPVVNSVAVEESKGSE 2440
+ + + NS ++ S+ E
Sbjct: 2091 EEQTNVNSKIETNSEELQASRTDE 2114
Score = 49 (22.3 bits), Expect = 2.7e-248, Sum P(5) = 2.7e-248
Identities = 71/346 (20%), Positives = 121/346 (34%)
Query: 1094 KKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADVNDVARVMKEIFS 1153
K++ +P AV A +K D G +S T +V + K S
Sbjct: 2468 KEKSLQSHMPSDDAVLHAPFENTKDSKGDDLHGESLVSC----PTMEVME----QKGFES 2519
Query: 1154 ETCSSKAKTGDSSLNEGKDXXXXXXXXXXXX-XEVAKKQSSDDKTCSVTPTVETPPPGFN 1212
ET A+T ++ G + V +S D S T + P G
Sbjct: 2520 ET---HARTDSGGIDRGNEVSENMSDGVKMNISSVQVPDASHDLNVSQDQT-DIPLVGGI 2575
Query: 1213 SPN---ENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPD 1269
P EN ++ + + A+ GH S + P++ A G++E+++N
Sbjct: 2576 DPEHVQENV-DVPASPHGAAPNIVIFQSEGHLSPS----ILPDDVA--GQLESMSNDEKT 2628
Query: 1270 DKSLPMVPN----LETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQ 1325
+ S VP+ L+ + DIP Q +V V + S +
Sbjct: 2629 NISSEQVPDVSHDLKVSQDQTDIPPVGGIVPENLQEIVDVPASPHGVVPDVVVS----QS 2684
Query: 1326 EKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVE-QSGTEIDAKVKWKNTP 1384
E++ + S + DD C M+ DI I G Q + + + +N+
Sbjct: 2685 EEIQSPSILPDDVPGQPDDGNCEKMDTMQNNTSIDIGITSGKTCQPSSSTQPEDENRNSL 2744
Query: 1385 LPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSLVKELIHRSPD 1430
E EV + + D + +E V+ S + E +RS D
Sbjct: 2745 SHCEPS----EVVEQRDSRDQVCIGSVESQVEISSAILE--NRSAD 2784
Score = 48 (22.0 bits), Expect = 1.1e-243, Sum P(4) = 1.1e-243
Identities = 50/216 (23%), Positives = 82/216 (37%)
Query: 1729 ASDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDE--HG 1786
AS S E +P D E+ + G A+L SS++ ++K + +E
Sbjct: 2051 ASASTTAEPLPTDKLEKNISFQDEVKTLNGDKREAILLSSEEQTNVNSKIETNSEELQAS 2110
Query: 1787 KVQLLPGADNPEGGVI---VPE----HKSE---NMGEKDDISSEHAFG-SSLVLQDKA-- 1833
+ +P D V V E H E +M E D++ + G SS+ LQ
Sbjct: 2111 RTDEVPHVDGKSVDVANQTVKEDEAKHSVEIQSSMLEPDELPNAGQKGHSSIDLQPLVLV 2170
Query: 1834 SEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVER--EKSEELGLP 1891
+ E +D+ D P S S +++ +E+ GV V + E + + L
Sbjct: 2171 TSNENAMSLDDKDYD---PISKSADIEQDPEESVFVQGVGRPKVGTADTQMEDTNDAKLL 2227
Query: 1892 SLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQ 1927
S EEK P + +D + S+ DQ
Sbjct: 2228 VGCSVESEEKEKTLQSLIPGDDADTEQDPEESVSDQ 2263
Score = 47 (21.6 bits), Expect = 1.0e-241, Sum P(3) = 1.0e-241
Identities = 92/446 (20%), Positives = 154/446 (34%)
Query: 1198 CSVTPTVETPP---P----GFNSPN-------ENPGEL-TGTKNDASVRGDHTPVSGHTL 1242
CS P V+ PP P G P+ +N L TG N + D P S T
Sbjct: 3071 CSTEPQVQLPPSAEPVVAEGTEFPSSLLMTGVDNSSHLMTGVDNAKTHLADVVPSSSPTT 3130
Query: 1243 ASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNN 1302
K + +++ G + + + S P + PP + I + E +
Sbjct: 3131 MEKNIEAQDQDQVTTGGC-GLVDVLTECSSEPQLQ----LPPSAEPVISEGTELATLPLT 3185
Query: 1303 PEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIP 1362
E + + E +S E+ V A CS P + P
Sbjct: 3186 EEENADSQLANIEPSSSPSVVEKNIEAQDQDQVKTAGCELVSTGCSSEPQVHLPPS---- 3241
Query: 1363 IEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPEN---KTDGDSVEKLEDT--VDD 1417
E G D V K T +V G P + +G++ +L DT
Sbjct: 3242 ----AEPDG---DIHVHLKETEKSESMVVVGEGTAFPSSLPVTEEGNAESQLADTEPFTS 3294
Query: 1418 HSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHS 1477
++V++ I G V +T SS+ ++ P + EG + ++ +
Sbjct: 3295 PTVVEKNIKDQEQVETTGCGLVDDSTG-CSSEPQVQLPPSAEPMEGTHMHLEETKKS--- 3350
Query: 1478 RETPILSGSPINSGTECSTVSVKTDVGNHPQ---------NVEPTSASPERSGPQNSAVG 1528
ET + + S + V+T++ + Q NV P+ S E PQ
Sbjct: 3351 -ETVVTEIQLADIDPSFSLIVVQTNIEDQDQIETGGCDLINV-PSGCSTE---PQIQLSS 3405
Query: 1529 FCDKSEIPSMEAEVAKCPSDAIVNNLLETPLDI-----KSIGG------PIVSM--KAAD 1575
+ E + E A S+ +V E P + ++ G P VS+ + +
Sbjct: 3406 SAEPEEGMHIHLEAAM-NSETVVTEGSELPSSLPMTEDENADGQLAEVEPSVSLTVEQTN 3464
Query: 1576 VADADHPLETA-VELGSPVNSCTVEP 1600
+ + DH +ETA EL C+ +P
Sbjct: 3465 IEEKDH-IETAECELVDVSPGCSSQP 3489
Score = 47 (21.6 bits), Expect = 7.7e-08, Sum P(5) = 7.7e-08
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 514 EHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMC--QAESSDSPKLKEEGLE 565
EHL + +GR R +++ YE++ EE ++ Q E ++ +E LE
Sbjct: 551 EHLKSYKKHKHGR--RIKQLEKYEQKMKEERQRRIRERQKEFFGGLEVHKEKLE 602
Score = 45 (20.9 bits), Expect = 6.4e-247, Sum P(5) = 6.4e-247
Identities = 20/86 (23%), Positives = 42/86 (48%)
Query: 866 ESKSNLQS--ENNSGGLRLSKSVSMGKQDALSQELSNK-IQVQPC--GVATSADVAGPDQ 920
E ++N+ S E NS L+ S++ + D S +++N+ ++ V + + PD+
Sbjct: 2091 EEQTNVNSKIETNSEELQASRTDEVPHVDGKSVDVANQTVKEDEAKHSVEIQSSMLEPDE 2150
Query: 921 KP-AEQSVRVVQSNQPINLPATHDSS 945
P A Q QP+ L +++++
Sbjct: 2151 LPNAGQKGHSSIDLQPLVLVTSNENA 2176
Score = 43 (20.2 bits), Expect = 8.4e-244, Sum P(4) = 8.4e-244
Identities = 19/87 (21%), Positives = 39/87 (44%)
Query: 914 DVAGPDQKPAEQSVRVVQSNQPINLPATHDSS-SQPSGSTPAQVPSMDLGNVASDTKEVL 972
DVAG + + + S Q ++ +HD SQ P P +G + + + +
Sbjct: 2614 DVAGQLESMSNDEKTNISSEQVPDV--SHDLKVSQDQTDIP---P---VGGIVPENLQEI 2665
Query: 973 SENSSSKGGVIPILALSNMKAVERVNI 999
+ +S GV+P + +S + ++ +I
Sbjct: 2666 VDVPASPHGVVPDVVVSQSEEIQSPSI 2692
Score = 42 (19.8 bits), Expect = 4.4e-256, Sum P(5) = 4.4e-256
Identities = 41/182 (22%), Positives = 58/182 (31%)
Query: 2245 PSASSI-PRGE-SKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKP 2302
PS S P+ + S + E I E N V + LP S E+E +G
Sbjct: 3392 PSGCSTEPQIQLSSSAEPEEGMHIHLEAAMNSETVVTEGSELPSSLPMTEDENADGQLAE 3451
Query: 2303 VGSEKESIASAVPLDESKGPDAEVSSQTAIEGG--GVVSIPVPEEADGPASF-LAAEEEK 2359
V ++E + + G + P D + E
Sbjct: 3452 VEPSVSLTVEQTNIEEKDHIETAECELVDVSPGCSSQPEVKFPPSPDAVGGMDVHLETVV 3511
Query: 2360 NECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAV--ALENTSEGMGGPSPPLVIAEDK 2417
E +D SS+ + E K+ E P D +DG T EG S LV E
Sbjct: 3512 TEDTDSN---SSLPKTEEKDAE----NPSDRLDGESDGTTVATVEGTCVESNSLVAEESN 3564
Query: 2418 TE 2419
E
Sbjct: 3565 IE 3566
Score = 42 (19.8 bits), Expect = 1.3e-246, Sum P(5) = 1.3e-246
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 914 DVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLG-NVASDTKE 970
D A +Q P E+SV V Q +N P ++++Q + A+V +G +V S+ KE
Sbjct: 2363 DDADTEQNP-EESVSV----QGVNRPKVGNANTQMEDTDEAKVL---VGCSVESEEKE 2412
Score = 42 (19.8 bits), Expect = 3.5e-241, Sum P(3) = 3.5e-241
Identities = 20/97 (20%), Positives = 39/97 (40%)
Query: 2293 EEKIEGFSKPVGSEKESIASAVP-LDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPAS 2351
EE+ SK + +E AS + G +V++QT E S+ + P
Sbjct: 2091 EEQTNVNSKIETNSEELQASRTDEVPHVDGKSVDVANQTVKEDEAKHSVEIQSSMLEPDE 2150
Query: 2352 FLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
A ++ + D +P+ S + + K ++P+
Sbjct: 2151 LPNAGQKGHSSIDLQPLVLVTSNENAMSLDDKDYDPI 2187
Score = 41 (19.5 bits), Expect = 1.3e-250, Sum P(5) = 1.3e-250
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1711 GGTGDKKADCKMEPDCLVASDSVNMELVPRDFGVGRRDGDIE 1752
G G D ++P LV S+ M L +D+ + DIE
Sbjct: 2155 GQKGHSSID--LQPLVLVTSNENAMSLDDKDYDPISKSADIE 2194
Score = 39 (18.8 bits), Expect = 4.4e-256, Sum P(5) = 4.4e-256
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 1688 IATSCDTASLDDSHDNGNVEVLCGGTGDKKADCKMEP 1724
++ S +++D D +VE D A+C EP
Sbjct: 2954 LSISAVQKNIEDK-DQSHVETAGSELVDVSAECSTEP 2989
Score = 38 (18.4 bits), Expect = 6.7e-240, Sum P(4) = 6.7e-240
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 1950 SLAPWEAKIDGSSEKDPVSSQSV 1972
+L+ +AK D +++ P SQSV
Sbjct: 1815 NLSGTKAKFDAVAKEQPHFSQSV 1837
Score = 37 (18.1 bits), Expect = 2.7e-244, Sum P(5) = 2.7e-244
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 1198 CSVTPTVETPP 1208
CS P V+ PP
Sbjct: 2985 CSTEPQVQLPP 2995
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 974 (347.9 bits), Expect = 4.2e-102, Sum P(4) = 4.2e-102
Identities = 219/482 (45%), Positives = 295/482 (61%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 104 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 161
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 162 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 217
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 218 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 277
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 278 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 333
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 334 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 393
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 394 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 453
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXX 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 454 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 513
Query: 423 XXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
R E E D+F +D RR EE ++ R + D LPS ++
Sbjct: 514 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIK 568
Query: 483 DD 484
DD
Sbjct: 569 DD 570
Score = 51 (23.0 bits), Expect = 4.2e-102, Sum P(4) = 4.2e-102
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 524 YGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
+GRG R R+ Y + TE+++ K E +++EE +K
Sbjct: 586 FGRGSRHRKEVDYSDSLTEKQWLKAI--EEGTLEEIEEEVRQK 626
Score = 48 (22.0 bits), Expect = 8.7e-102, Sum P(4) = 8.7e-102
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 983 IPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITE 1025
+P + + VER+ + EEK S+ + + DS+TE
Sbjct: 562 LPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTE 604
Score = 44 (20.5 bits), Expect = 4.2e-102, Sum P(4) = 4.2e-102
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E E+ E ++E S ++ K + + D + G G + P V+++
Sbjct: 793 ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGG----RRRPSRGSRAKP-VVSD 847
Query: 2416 DKTENEIEED 2425
D +E E EED
Sbjct: 848 DDSEEEQEED 857
Score = 44 (20.5 bits), Expect = 2.9e-100, Sum P(3) = 2.9e-100
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQP 750
GS+S S ++ GR + Q + RRR + P SDD +E+
Sbjct: 804 GSESESRSVKVKIK-LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDD---------DSEEE 853
Query: 751 QSESLNPSGGE 761
Q E + SG E
Sbjct: 854 QEEDRSGSGSE 864
Score = 42 (19.8 bits), Expect = 6.9e-102, Sum P(4) = 6.9e-102
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
IEK ++ ++ E +GEE SE+
Sbjct: 783 IEKEDDSEGEESEEEEEGEEEGSESES 809
Score = 42 (19.8 bits), Expect = 4.7e-100, Sum P(3) = 4.7e-100
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
G+ K Q RRR R + P +SD + E Q E+ SG
Sbjct: 819 GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE-----QEEDRSG 860
Score = 41 (19.5 bits), Expect = 4.2e-102, Sum P(4) = 4.2e-102
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 1087 EAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSR 1122
++ R+R + +GPS P S K ++ + K R
Sbjct: 627 KSSRKRKRDSDAGPSTPTTSTRSRDKDDESKKQKKR 662
Score = 40 (19.1 bits), Expect = 1.1e-101, Sum P(4) = 1.1e-101
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 1959 DGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEK 2018
D +EK + +++ EG+ E + E Q S ++ D A +TP T +K
Sbjct: 600 DSLTEKQWL--KAIEEGTLEEIEEEVRQKKSSRKRKR-----DSDAGPSTPTTSTRSRDK 652
Query: 2019 DPDS 2022
D +S
Sbjct: 653 DDES 656
Score = 39 (18.8 bits), Expect = 6.9e-102, Sum P(4) = 6.9e-102
Identities = 30/126 (23%), Positives = 46/126 (36%)
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
K D+ G TP + K + K + K GR P +K P PNL
Sbjct: 633 KRDSDA-GPSTPTTSTRSRDKDDESKKQKKR--GR-------PPAEKLSPNPPNLTKKMK 682
Query: 1285 GFDIPIEKHNEQSRNQNNPEV-----KGEETPVSSEAPASTEAFEQ--EKVTNTSSFVNL 1337
+ K+ + S + EV +E P E F++ E++ N + +L
Sbjct: 683 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 741
Query: 1338 ADLSSD 1343
DL D
Sbjct: 742 NDLEKD 747
Score = 39 (18.8 bits), Expect = 3.1e-97, Sum P(2) = 3.1e-97
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 503 VSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSD 555
V +G K K + + RG RA+ V S ++ E+E ++ D
Sbjct: 814 VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 866
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 974 (347.9 bits), Expect = 7.4e-100, Sum P(4) = 7.4e-100
Identities = 215/488 (44%), Positives = 297/488 (60%)
Query: 16 EKIVHQ-KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQ 73
E I+ KFNVLLTT+EY++ ++ L K++W Y+IIDEGHR+KN CKL L +Q
Sbjct: 457 EPIIKSGKFNVLLTTFEYVIR--EKALLGKLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQ 514
Query: 74 SSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXX 133
RLL+TGTP IF+S F QWFN PF + G+
Sbjct: 515 CQRRLLITGTPLQNKLPELWALLNFLLPSIFSSCSTFEQWFNAPFATTGEK----VELTQ 570
Query: 134 XXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSI 193
II RLH+VLRPF+LRRLK +VE+ELP+K+E +VRC+ SA QK+L K +++ L
Sbjct: 571 EETMLIIRRLHKVLRPFLLRRLKKEVESELPDKMEFVVRCDMSALQKVLYKHMQKGLLLD 630
Query: 194 G--NSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPI--VRLCGKLEMLDR 249
G N+ +S+ N+++ LR +CNHP+L + E ++ + R+ GKLE+L R
Sbjct: 631 GKTNTGSKSLRNTMIHLRKLCNHPFLFENVEESCRNFWDARFISAVDLYRVSGKLELLSR 690
Query: 250 LLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDS 309
+LPKL+AT HRVL F MT ++ ++ED+L +YLRLDG T +RGAL+DKFN +S
Sbjct: 691 ILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNS 750
Query: 310 PFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETV 369
+F+F+LS RAGG+G+NLQ ADTVIIFD+DWNP D+QAQ RAHRIGQK +V V R T
Sbjct: 751 EYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITA 810
Query: 370 QTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXXXXX 428
+VEE++ A+A +KL V + I AG FDN ++ +RRE LE++++ E + EE
Sbjct: 811 NSVEEKILAAARYKLNVDEKVIQAGKFDNRSTGAERREILENIIKTENESEEDEEVPNDE 870
Query: 429 XXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKA 488
RSE E ++F+ +D++R E E A K R +G D P L + TD KA
Sbjct: 871 DINDILSRSEEEFELFQKMDQERFENEQAQKAKP-RLVGEDEIPRDILRAADETDYIEKA 929
Query: 489 LYEAMKIY 496
E Y
Sbjct: 930 KEEGRVPY 937
Score = 61 (26.5 bits), Expect = 7.4e-100, Sum P(4) = 7.4e-100
Identities = 24/96 (25%), Positives = 32/96 (33%)
Query: 1337 LADLSSDDKTCSVTPAMETAPGFDIPIEKGVE-QSGTEIDAKVKWKNTPLPGEAIVAGIE 1395
L L +D T S E P P + +S + +K + P P
Sbjct: 964 LEKLFDEDDTTSARTEEEPNPAQPGPSSVSISLESSCDTQKDIKVDDVPAPPLTFKVPRL 1023
Query: 1396 VFKPENKTDGDSVEKLEDTVDDHSLVKELIHRSPDH 1431
K + E DD+SL KE HR DH
Sbjct: 1024 TIKLGGDEKKRKHNRSESDSDDNSLKKEKKHRKEDH 1059
Score = 60 (26.2 bits), Expect = 7.4e-100, Sum P(4) = 7.4e-100
Identities = 25/104 (24%), Positives = 45/104 (43%)
Query: 1964 KDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSS 2023
++P + +G KE + D P+K +H D S E+K + + D DS+
Sbjct: 1111 EEPPKKEHRDKGRKEEKSHKHRSDDDDSSPKK-KKHRDSDES---SEKKKKKHKHDSDSA 1166
Query: 2024 FAAQEDPKESVVEAGDQMGVSLGGA--TVMEKSSEDLATPPLSL 2065
+E SV + M + +G ++ ++ED PP+ L
Sbjct: 1167 LKLREGSPLSVDKEKSPMKIRIGQGQPSISLAANEDKNHPPIKL 1210
Score = 53 (23.7 bits), Expect = 4.0e-99, Sum P(4) = 4.0e-99
Identities = 17/76 (22%), Positives = 30/76 (39%)
Query: 1963 EKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKL--PEHLDIPASLATPEEKTEGSEKDP 2020
E P+S K + + + ++ +K P L + P ++T+GS+KD
Sbjct: 1171 EGSPLSVDKEKSPMKIRIGQGQPSISLAANEDKNHPPIKLKLNVKFNMPSQETDGSKKDK 1230
Query: 2021 DSSFAAQEDPKESVVE 2036
+E KE E
Sbjct: 1231 KEPHKEKEKDKEKEKE 1246
Score = 53 (23.7 bits), Expect = 8.1e-98, Sum P(5) = 8.1e-98
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 1398 KPENKTDGDSVEKLED--TVDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKM----P 1451
K E++ G EK + DD S K+ HR D S + S+ + K+ P
Sbjct: 1115 KKEHRDKGRKEEKSHKHRSDDDDSSPKKKKHRDSDESSEKKKKKHKHDSDSALKLREGSP 1174
Query: 1452 L-----ETPLIMKSTEG-PSVSMKADDVADH 1476
L ++P+ ++ +G PS+S+ A++ +H
Sbjct: 1175 LSVDKEKSPMKIRIGQGQPSISLAANEDKNH 1205
Score = 52 (23.4 bits), Expect = 1.9e-97, Sum P(4) = 1.9e-97
Identities = 15/64 (23%), Positives = 25/64 (39%)
Query: 919 DQKPAEQSVRVVQSNQPINLPATHDSSSQPSG---STPAQVPSMDLGNVASDTKEVLSEN 975
D++ + +R+ Q I+L A D + P + +PS + D KE E
Sbjct: 1178 DKEKSPMKIRIGQGQPSISLAANEDKNHPPIKLKLNVKFNMPSQETDGSKKDKKEPHKEK 1237
Query: 976 SSSK 979
K
Sbjct: 1238 EKDK 1241
Score = 45 (20.9 bits), Expect = 6.4e-96, Sum P(3) = 6.4e-96
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 510 KRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEE 562
K K E G +H + K + E TEEE + + E+ + KEE
Sbjct: 1243 KEKEEDKGKEKEKHKDKDKDKEHKKKSREDETEEE--RRARKEAKRLKRQKEE 1293
Score = 43 (20.2 bits), Expect = 1.0e-97, Sum P(3) = 1.0e-97
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 2403 GMGGPSPPLVIAEDKTENEIEEDPVVN-SVAVEESKGSEAD 2442
G G PS L EDK I+ V ++ +E+ GS+ D
Sbjct: 1189 GQGQPSISLAANEDKNHPPIKLKLNVKFNMPSQETDGSKKD 1229
Score = 43 (20.2 bits), Expect = 1.9e-97, Sum P(4) = 1.9e-97
Identities = 15/67 (22%), Positives = 24/67 (35%)
Query: 1076 KRHGRKTPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSK 1135
K H +K+ RR +K+ DAKL + K+ + +S+
Sbjct: 1263 KEHKKKSREDETEEERRARKEAKRLKRQKEEQEDDAKLQEKLARKAAKKEQKRLEKEKSE 1322
Query: 1136 QETADVN 1142
T VN
Sbjct: 1323 SSTGTVN 1329
Score = 42 (19.8 bits), Expect = 2.4e-97, Sum P(4) = 2.4e-97
Identities = 11/51 (21%), Positives = 23/51 (45%)
Query: 1292 KHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSS 1342
K ++ + + + K +E A + E+EK +++ VNL+ S
Sbjct: 1285 KRLKRQKEEQEDDAKLQEKLARKAAKKEQKRLEKEKSESSTGTVNLSAAGS 1335
Score = 41 (19.5 bits), Expect = 1.5e-98, Sum P(5) = 1.5e-98
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 742 PDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVK 787
P+P P S S++ T D V +P P+ V +K
Sbjct: 982 PNP-AQPGPSSVSISLESSCDTQKDIKVDDVPAPPLTFKVPRLTIK 1026
Score = 39 (18.8 bits), Expect = 1.5e-98, Sum P(5) = 1.5e-98
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 1292 KHNEQSRNQNNPEVKGEETPVSSEAPASTEA 1322
K ++ R +++P+ K +E E ST++
Sbjct: 1049 KKEKKHRKEDHPKEKEKEKKKEKEQEKSTDS 1079
Score = 38 (18.4 bits), Expect = 7.4e-100, Sum P(4) = 7.4e-100
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKA 2384
E+EK++ DK+ S+ + E E +A
Sbjct: 1252 EKEKHKDKDKDKEHKKKSREDETEEERRA 1280
Score = 37 (18.1 bits), Expect = 1.9e-97, Sum P(4) = 1.9e-97
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1875 SPVHVVEREKSEEL-----GLPSLSSATKEEK 1901
SP+ V ++EKS G PS+S A E+K
Sbjct: 1173 SPLSV-DKEKSPMKIRIGQGQPSISLAANEDK 1203
Score = 37 (18.1 bits), Expect = 2.4e-97, Sum P(4) = 2.4e-97
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 525 GRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
G K+ + RS E + +K + D PK KE+ +K
Sbjct: 1029 GDEKKRKHNRS-ESDSDDNSLKKEKKHRKEDHPKEKEKEKKK 1069
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 1003 (358.1 bits), Expect = 1.7e-96, Sum P(3) = 1.7e-96
Identities = 238/562 (42%), Positives = 328/562 (58%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 796 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 853
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 854 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER----VDLNEEETILII 909
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L GS +
Sbjct: 910 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 969
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEE--VDTLIPKHYL---PPIVRLCGKLEM 246
KG+ ++ N++M+LR ICNHPY+ Q H EE + L + + + R GK E+
Sbjct: 970 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEESFAEHLGYSNGVINGAELYRASGKFEL 1028
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+
Sbjct: 1029 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1088
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
S +FIFLLS RAGG+G+NLQAADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V VLR
Sbjct: 1089 PGSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1148
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXX 425
TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1149 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1208
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
R E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1209 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD- 1262
Query: 486 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEF 545
A E + + + +R ++ AL + + RA E + EE E
Sbjct: 1263 --AEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW---LRAIEDGNLEEMEEEVRL 1317
Query: 546 EKMCQAESSDSPKLKEEGLEKS 567
+K + + D KE+G EK+
Sbjct: 1318 KKRKRRRNVDKDSGKEDG-EKA 1338
Score = 51 (23.0 bits), Expect = 1.7e-96, Sum P(3) = 1.7e-96
Identities = 28/116 (24%), Positives = 46/116 (39%)
Query: 1752 EIFNMEGGP--SNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSE 1809
+ FN+EG ++++ S + +SA+ + +E + + D + E KS
Sbjct: 1435 QTFNLEGSQIYEDSIVLQS---VFKSARQKIAKEEESEDESNDDEDEDDEEESESESKSV 1491
Query: 1810 N----MGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDE 1861
+ +KD+ S E G + KA D DE Q D SG DE
Sbjct: 1492 KVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQ-DENDQSEASGSDDE 1546
Score = 43 (20.2 bits), Expect = 1.7e-96, Sum P(3) = 1.7e-96
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 59 KNASCKLNADLKHYQ 73
K +S +N LKHYQ
Sbjct: 688 KQSSLLINGTLKHYQ 702
Score = 43 (20.2 bits), Expect = 1.2e-95, Sum P(3) = 1.2e-95
Identities = 16/81 (19%), Positives = 39/81 (48%)
Query: 1958 IDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGS 2016
++GS +D + QSV + +++ +A+ + D S E + + + + + K + +
Sbjct: 1439 LEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEDEDDEEESESESKSVKVKIKLN 1498
Query: 2017 EKDPDSSFAAQEDPKESVVEA 2037
+KD S + ++S +A
Sbjct: 1499 KKDEKSREKGKGKKRQSRAKA 1519
Score = 41 (19.5 bits), Expect = 1.9e-95, Sum P(3) = 1.9e-95
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 833 QSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSE 874
+ K++ G +R+ + +A P +SD + + N QSE
Sbjct: 1500 KDEKSREKGKGKKRQSRAKA--KPVVSDDDSDEDQDENDQSE 1539
Score = 41 (19.5 bits), Expect = 1.9e-95, Sum P(3) = 1.9e-95
Identities = 17/83 (20%), Positives = 33/83 (39%)
Query: 847 RGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQP 906
+ RQ + S+ + + + + E+ S + + + K+D S+E + Q
Sbjct: 1456 KSARQKIAKEEESEDESNDDEDEDDEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQS 1515
Query: 907 CGVA---TSADVAGPDQKPAEQS 926
A S D + DQ +QS
Sbjct: 1516 RAKAKPVVSDDDSDEDQDENDQS 1538
Score = 40 (19.1 bits), Expect = 2.4e-95, Sum P(3) = 2.4e-95
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 2168 VVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVE 2202
+V ++V + + +++ E++ S DDE + E E
Sbjct: 1449 IVLQSVFKSARQKIAKEEESEDESNDDEDEDDEEE 1483
Score = 37 (18.1 bits), Expect = 4.9e-95, Sum P(3) = 4.9e-95
Identities = 15/71 (21%), Positives = 30/71 (42%)
Query: 2355 AEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIA 2414
+E+E N+ D++ S S+ +S + + K D + + P+V
Sbjct: 1468 SEDESNDDEDEDDEEESESESKSVKVKIK-LNKKDEKSREKGKGKKRQSRA-KAKPVVSD 1525
Query: 2415 EDKTENEIEED 2425
+D E++ E D
Sbjct: 1526 DDSDEDQDEND 1536
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 935 (334.2 bits), Expect = 7.0e-96, Sum P(3) = 7.0e-96
Identities = 224/570 (39%), Positives = 323/570 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 185 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 242
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 243 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 298
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 299 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 358
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 359 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 414
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 415 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 474
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 475 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 534
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXX 423
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L +++E
Sbjct: 535 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRH 594
Query: 424 XXXXXXXXXXXXRSESEIDVFESVDKQ--RREEEMATWRKLIRGLGTDGEPLP-----PL 476
+ V +++ + E+E+ + + + E L
Sbjct: 595 CSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDL 654
Query: 477 PSRLVTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSY 536
R + K M+ + P + + V+R + + +GRG R R+ Y
Sbjct: 655 DRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLT--CEEEEEKMFGRGSRHRKEVDY 712
Query: 537 EEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
+ TE+++ K E +++EE +K
Sbjct: 713 SDSLTEKQWLKAI--EEGTLEEIEEEVRQK 740
Score = 49 (22.3 bits), Expect = 7.0e-96, Sum P(3) = 7.0e-96
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 524 YGRGKRAREVRSY-----EEQW-------TEEEFEKMCQAESSDSPKLKEEGLEKSLPTV 571
+GRG R R+ Y E+QW T EE E+ + + S + ++ S PT
Sbjct: 700 FGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGPSTPTT 759
Query: 572 VSSS 575
+ S
Sbjct: 760 STRS 763
Score = 44 (20.5 bits), Expect = 7.0e-96, Sum P(3) = 7.0e-96
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E E+ E ++E S ++ K + + D + G G + P V+++
Sbjct: 907 ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGG----RRRPSRGSRAKP-VVSD 961
Query: 2416 DKTENEIEED 2425
D +E E EED
Sbjct: 962 DDSEEEQEED 971
Score = 44 (20.5 bits), Expect = 7.0e-96, Sum P(3) = 7.0e-96
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQP 750
GS+S S ++ GR + Q + RRR + P SDD +E+
Sbjct: 918 GSESESRSVKVKIK-LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDD---------DSEEE 967
Query: 751 QSESLNPSGGE 761
Q E + SG E
Sbjct: 968 QEEDRSGSGSE 978
Score = 42 (19.8 bits), Expect = 1.1e-95, Sum P(3) = 1.1e-95
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
IEK ++ ++ E +GEE SE+
Sbjct: 897 IEKEDDSEGEESEEEEEGEEEGSESES 923
Score = 42 (19.8 bits), Expect = 1.1e-95, Sum P(3) = 1.1e-95
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
G+ K Q RRR R + P +SD + E Q E+ SG
Sbjct: 933 GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE-----QEEDRSG 974
Score = 41 (19.5 bits), Expect = 4.9e-95, Sum P(3) = 4.9e-95
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 1087 EAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSR 1122
++ R+R + +GPS P S K ++ + K R
Sbjct: 741 KSSRKRKRDSDAGPSTPTTSTRSRDKDDESKKQKKR 776
Score = 40 (19.1 bits), Expect = 6.2e-95, Sum P(3) = 6.2e-95
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 1959 DGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEK 2018
D +EK + +++ EG+ E + E Q S ++ D A +TP T +K
Sbjct: 714 DSLTEKQWL--KAIEEGTLEEIEEEVRQKKSSRKRKR-----DSDAGPSTPTTSTRSRDK 766
Query: 2019 DPDS 2022
D +S
Sbjct: 767 DDES 770
Score = 39 (18.8 bits), Expect = 7.9e-95, Sum P(3) = 7.9e-95
Identities = 30/126 (23%), Positives = 46/126 (36%)
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
K D+ G TP + K + K + K GR P +K P PNL
Sbjct: 747 KRDSDA-GPSTPTTSTRSRDKDDESKKQKKR--GR-------PPAEKLSPNPPNLTKKMK 796
Query: 1285 GFDIPIEKHNEQSRNQNNPEV-----KGEETPVSSEAPASTEAFEQ--EKVTNTSSFVNL 1337
+ K+ + S + EV +E P E F++ E++ N + +L
Sbjct: 797 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 855
Query: 1338 ADLSSD 1343
DL D
Sbjct: 856 NDLEKD 861
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 938 (335.3 bits), Expect = 8.1e-96, Sum P(2) = 8.1e-96
Identities = 200/446 (44%), Positives = 273/446 (61%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL-KHYQ 73
R +I KFNVL+T Y+ +M D+ L KI W+Y+I+DEGHR+KN C L L Y+
Sbjct: 477 RARIAGGKFNVLITHYDLIMR--DKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYR 534
Query: 74 SSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXX 133
RLLLTGTP IFNS +F +WFN PF G S
Sbjct: 535 IKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSAS-----LTD 589
Query: 134 XXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSI 193
IINRLH V+RPF+LRR K +VE LP K + +++C+ SA+QKL K+V + +G +
Sbjct: 590 EEELLIINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTD-VGRV 648
Query: 194 G----NSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDR 249
G N K +S+ N M+LR CNHPYL + A+ + K P IVR GK E+LDR
Sbjct: 649 GLHSGNGKSKSLQNLTMQLRKCCNHPYLF-VGADY--NMCKK---PEIVRASGKFELLDR 702
Query: 250 LLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDS 309
LLPKLK HR+L FS MTRL+D++E YL+ Y YLRLDG T RG L+ +FN+ DS
Sbjct: 703 LLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDS 762
Query: 310 PFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETV 369
P+F+FLLS RAGG+G+NLQ ADT+IIFD+DWNPQ+D QA+ RAHRIGQK++V V ++
Sbjct: 763 PYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSI 822
Query: 370 QTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXX 429
++EE + A+ K+G+ + I AG F+ ++A+DRRE LE ++ +
Sbjct: 823 GSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMSKGTSSLGEDVPSERE 882
Query: 430 XXXXXXRSESEIDVFESVDKQRREEE 455
R+E E +FE +D++RR++E
Sbjct: 883 INRLAARTEEEFWMFEQMDEERRKKE 908
Score = 62 (26.9 bits), Expect = 8.1e-96, Sum P(2) = 8.1e-96
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 523 HYGR--GKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVS--SSAPA 578
H+G GKR R+ Y + ++ ++ K ++E D+ K+ ++ T +S S A A
Sbjct: 939 HFGSLTGKRKRKEAVYSDSLSDLQWMKAMESEDEDASKVSQKRKRTDTKTRMSNGSKAEA 998
Query: 579 VYS 581
V S
Sbjct: 999 VLS 1001
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 1001 (357.4 bits), Expect = 3.3e-95, Sum P(4) = 3.3e-95
Identities = 236/562 (41%), Positives = 329/562 (58%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 827 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 884
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 885 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER----VDLNEEETILII 940
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L GS +
Sbjct: 941 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 1000
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEE--VDTLIPKHYL---PPIVRLCGKLEM 246
KG+ ++ N++M+LR ICNHPY+ Q H EE + L + + + R GK E+
Sbjct: 1001 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEESFAEHLGYSNGVINGAELYRASGKFEL 1059
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+
Sbjct: 1060 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1119
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR
Sbjct: 1120 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1179
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXX 425
TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1180 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1239
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
R E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1240 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD- 1293
Query: 486 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEF 545
A E + + + +R ++ AL + + RA E + EE E
Sbjct: 1294 --AEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW---LRAIEDGNLEEMEEEVRL 1348
Query: 546 EKMCQAESSDSPKLKEEGLEKS 567
+K + + D +KE+ +EK+
Sbjct: 1349 KKRKRRRNVDKDPVKED-VEKA 1369
Score = 47 (21.6 bits), Expect = 3.3e-95, Sum P(4) = 3.3e-95
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 833 QSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSE 874
+ R T G P R GK + P +SD + E + N QSE
Sbjct: 1534 KGRDTGKGKKRPNR-GKAK----PVVSDFDSDEEQEENEQSE 1570
Score = 44 (20.5 bits), Expect = 3.3e-95, Sum P(4) = 3.3e-95
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 526 RGKRAREVRSYEEQWTEEEFEKMCQAES-SDSPKLK 560
R K A+E S EE EEE + ++ES + S K+K
Sbjct: 1490 RQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVK 1525
Score = 40 (19.1 bits), Expect = 3.3e-95, Sum P(4) = 3.3e-95
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 59 KNASCKLNADLKHYQ 73
K ++ +N LKHYQ
Sbjct: 719 KQSALLINGTLKHYQ 733
Score = 39 (18.8 bits), Expect = 1.7e-94, Sum P(3) = 1.7e-94
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 2355 AEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIA 2414
+EEE NE +++ S S+ +S + + K + + G + G + P+V
Sbjct: 1499 SEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEE--KGRDTGKGKKRPNRGKAKPVVSD 1556
Query: 2415 EDKTENEIEED 2425
D E + E +
Sbjct: 1557 FDSDEEQEENE 1567
Score = 37 (18.1 bits), Expect = 2.7e-94, Sum P(3) = 2.7e-94
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
I K E N E + +E SEA
Sbjct: 1493 IAKEEESEEESNEEEEEDDEEESESEA 1519
Score = 37 (18.1 bits), Expect = 2.7e-94, Sum P(3) = 2.7e-94
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 2174 QEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMD 2208
+EEE E S E++ + ES+ V+ ++++
Sbjct: 1495 KEEESEEESNEEEEEDDEEESESEAKSVKVKIKLN 1529
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 1001 (357.4 bits), Expect = 5.3e-95, Sum P(3) = 5.3e-95
Identities = 236/562 (41%), Positives = 329/562 (58%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 829 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 886
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 887 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER----VDLNEEETILII 942
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L GS +
Sbjct: 943 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 1002
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEE--VDTLIPKHYL---PPIVRLCGKLEM 246
KG+ ++ N++M+LR ICNHPY+ Q H EE + L + + + R GK E+
Sbjct: 1003 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEESFAEHLGYSNGVINGAELYRASGKFEL 1061
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+
Sbjct: 1062 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1121
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR
Sbjct: 1122 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1181
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXX 425
TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1182 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1241
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
R E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1242 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD- 1295
Query: 486 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEF 545
A E + + + +R ++ AL + + RA E + EE E
Sbjct: 1296 --AEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW---LRAIEDGNLEEMEEEVRL 1350
Query: 546 EKMCQAESSDSPKLKEEGLEKS 567
+K + + D +KE+ +EK+
Sbjct: 1351 KKRKRRRNVDKDPVKED-VEKA 1371
Score = 40 (19.1 bits), Expect = 5.3e-95, Sum P(3) = 5.3e-95
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 59 KNASCKLNADLKHYQ 73
K ++ +N LKHYQ
Sbjct: 721 KQSALLINGTLKHYQ 735
Score = 39 (18.8 bits), Expect = 5.3e-95, Sum P(3) = 5.3e-95
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 1963 EKDPVSSQSVLEGS-KETV 1980
EK P +SQ +EG+ KE+V
Sbjct: 1411 EKVPCNSQLEIEGNRKESV 1429
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 1001 (357.4 bits), Expect = 7.5e-95, Sum P(4) = 7.5e-95
Identities = 236/562 (41%), Positives = 329/562 (58%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 829 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 886
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 887 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER----VDLNEEETILII 942
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L GS +
Sbjct: 943 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 1002
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEE--VDTLIPKHYL---PPIVRLCGKLEM 246
KG+ ++ N++M+LR ICNHPY+ Q H EE + L + + + R GK E+
Sbjct: 1003 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEESFAEHLGYSNGVINGAELYRASGKFEL 1061
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+
Sbjct: 1062 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1121
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR
Sbjct: 1122 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1181
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXX 425
TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1182 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1241
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
R E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1242 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD- 1295
Query: 486 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEF 545
A E + + + +R ++ AL + + RA E + EE E
Sbjct: 1296 --AEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW---LRAIEDGNLEEMEEEVRL 1350
Query: 546 EKMCQAESSDSPKLKEEGLEKS 567
+K + + D +KE+ +EK+
Sbjct: 1351 KKRKRRRNVDKDPVKED-VEKA 1371
Score = 45 (20.9 bits), Expect = 7.5e-95, Sum P(4) = 7.5e-95
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 833 QSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSE 874
+ R T G P R GK + P +SD + E N QSE
Sbjct: 1554 KGRDTGKGKKRPNR-GKAK----PVVSDFDSDEEQDENEQSE 1590
Score = 44 (20.5 bits), Expect = 7.5e-95, Sum P(4) = 7.5e-95
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 526 RGKRAREVRSYEEQWTEEEFEKMCQAES-SDSPKLK 560
R K A+E S EE EEE E ++E+ + S K+K
Sbjct: 1510 RQKIAKEEESEEESNEEEEEEDEEESEAEAKSVKVK 1545
Score = 41 (19.5 bits), Expect = 1.1e-93, Sum P(4) = 1.1e-93
Identities = 41/174 (23%), Positives = 67/174 (38%)
Query: 2263 NNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGP 2322
N+ ++ EG + RQ + LP S ++ E E KPV +K S G
Sbjct: 1416 NSQLEIEGNSSGRQLSEVFIQLP-SRKELPEY-YELIRKPVDFKKIKERIRNHKYRSLGD 1473
Query: 2323 -DAEV-----SSQTA-IEGGGVV--SIPVPEEADGPASFLAAEEEKNECS--DKEPVGSS 2371
+ +V ++QT +EG + SI + +A EEE E S ++E
Sbjct: 1474 LEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEEDEE 1533
Query: 2372 VSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAEDKTENEIEED 2425
S+ E+K + K G + G + P+V D E + E +
Sbjct: 1534 ESEAEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQDENE 1587
Score = 40 (19.1 bits), Expect = 7.5e-95, Sum P(4) = 7.5e-95
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 59 KNASCKLNADLKHYQ 73
K ++ +N LKHYQ
Sbjct: 721 KQSALLINGTLKHYQ 735
Score = 38 (18.4 bits), Expect = 2.2e-93, Sum P(4) = 2.2e-93
Identities = 12/63 (19%), Positives = 33/63 (52%)
Query: 1958 IDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGS 2016
++GS +D + QSV + +++ +A+ + + S E+ + + A + + K + +
Sbjct: 1490 LEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEEDEEESEAEAKSVKVKIKLN 1549
Query: 2017 EKD 2019
+K+
Sbjct: 1550 KKE 1552
Score = 37 (18.1 bits), Expect = 1.1e-93, Sum P(4) = 1.1e-93
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 869 SNLQSENNSGGLRLSK 884
S L+ E NS G +LS+
Sbjct: 1417 SQLEIEGNSSGRQLSE 1432
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 999 (356.7 bits), Expect = 7.8e-95, Sum P(3) = 7.8e-95
Identities = 236/562 (41%), Positives = 328/562 (58%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 804 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 861
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 862 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER----VDLNEEETILII 917
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L GS +
Sbjct: 918 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 977
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEE--VDTLIPKHYL---PPIVRLCGKLEM 246
KG+ ++ N++M+LR ICNHPY+ Q H EE + L + + + R GK E+
Sbjct: 978 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEESFAEHLGYSNGVINGAELYRASGKFEL 1036
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+
Sbjct: 1037 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1096
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR
Sbjct: 1097 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1156
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXX 425
TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1157 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1216
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
R E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1217 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD- 1270
Query: 486 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEF 545
A E + + + +R ++ AL + + RA E + EE E
Sbjct: 1271 --AEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW---LRAIEDGNLEEMEEEVRL 1325
Query: 546 EKMCQAESSDSPKLKEEGLEKS 567
+K + + D KE+ +EK+
Sbjct: 1326 KKRKRRRNVDKDPAKED-VEKA 1346
Score = 44 (20.5 bits), Expect = 1.2e-94, Sum P(4) = 1.2e-94
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 526 RGKRAREVRSYEEQWTEEEFEKMCQAES-SDSPKLK 560
R K A+E S +E EEE E ++ES + S K+K
Sbjct: 1467 RQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVK 1502
Score = 43 (20.2 bits), Expect = 7.8e-95, Sum P(3) = 7.8e-95
Identities = 13/63 (20%), Positives = 33/63 (52%)
Query: 1958 IDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGS 2016
++GS +D + QSV + +++ +A+ + D S E+ + + + + + K + +
Sbjct: 1447 LEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLN 1506
Query: 2017 EKD 2019
+KD
Sbjct: 1507 KKD 1509
Score = 42 (19.8 bits), Expect = 1.2e-94, Sum P(4) = 1.2e-94
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 828 MQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSE 874
+ K + + + G RGK + P +SD + E N QSE
Sbjct: 1505 LNKKDEKGRDKGKGKKRPNRGKAK----PVVSDFDSDEEQDENEQSE 1547
Score = 40 (19.1 bits), Expect = 7.8e-95, Sum P(3) = 7.8e-95
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 59 KNASCKLNADLKHYQ 73
K ++ +N LKHYQ
Sbjct: 696 KQSALLINGTLKHYQ 710
Score = 39 (18.8 bits), Expect = 2.1e-94, Sum P(3) = 2.1e-94
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 2353 LAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVD--GAVALENTSEGMGGPSPP 2410
+A EEE + S++E + ES+ K ++ D G + G + P
Sbjct: 1470 IAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKP 1529
Query: 2411 LVIAEDKTENEIEED 2425
+V D E + E +
Sbjct: 1530 VVSDFDSDEEQDENE 1544
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 999 (356.7 bits), Expect = 8.0e-95, Sum P(3) = 8.0e-95
Identities = 236/562 (41%), Positives = 328/562 (58%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 806 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 863
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 864 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER----VDLNEEETILII 919
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L GS +
Sbjct: 920 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 979
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEE--VDTLIPKHYL---PPIVRLCGKLEM 246
KG+ ++ N++M+LR ICNHPY+ Q H EE + L + + + R GK E+
Sbjct: 980 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEESFAEHLGYSNGVINGAELYRASGKFEL 1038
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+
Sbjct: 1039 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1098
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR
Sbjct: 1099 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1158
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXX 425
TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1159 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1218
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
R E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1219 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD- 1272
Query: 486 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEF 545
A E + + + +R ++ AL + + RA E + EE E
Sbjct: 1273 --AEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW---LRAIEDGNLEEMEEEVRL 1327
Query: 546 EKMCQAESSDSPKLKEEGLEKS 567
+K + + D KE+ +EK+
Sbjct: 1328 KKRKRRRNVDKDPAKED-VEKA 1348
Score = 44 (20.5 bits), Expect = 1.2e-94, Sum P(4) = 1.2e-94
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 526 RGKRAREVRSYEEQWTEEEFEKMCQAES-SDSPKLK 560
R K A+E S +E EEE E ++ES + S K+K
Sbjct: 1469 RQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVK 1504
Score = 43 (20.2 bits), Expect = 8.0e-95, Sum P(3) = 8.0e-95
Identities = 13/63 (20%), Positives = 33/63 (52%)
Query: 1958 IDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGS 2016
++GS +D + QSV + +++ +A+ + D S E+ + + + + + K + +
Sbjct: 1449 LEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLN 1508
Query: 2017 EKD 2019
+KD
Sbjct: 1509 KKD 1511
Score = 42 (19.8 bits), Expect = 1.2e-94, Sum P(4) = 1.2e-94
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 828 MQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSE 874
+ K + + + G RGK + P +SD + E N QSE
Sbjct: 1507 LNKKDEKGRDKGKGKKRPNRGKAK----PVVSDFDSDEEQDENEQSE 1549
Score = 40 (19.1 bits), Expect = 8.0e-95, Sum P(3) = 8.0e-95
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 59 KNASCKLNADLKHYQ 73
K ++ +N LKHYQ
Sbjct: 698 KQSALLINGTLKHYQ 712
Score = 39 (18.8 bits), Expect = 2.1e-94, Sum P(3) = 2.1e-94
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 2353 LAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVD--GAVALENTSEGMGGPSPP 2410
+A EEE + S++E + ES+ K ++ D G + G + P
Sbjct: 1472 IAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKP 1531
Query: 2411 LVIAEDKTENEIEED 2425
+V D E + E +
Sbjct: 1532 VVSDFDSDEEQDENE 1546
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 999 (356.7 bits), Expect = 8.0e-95, Sum P(3) = 8.0e-95
Identities = 236/562 (41%), Positives = 328/562 (58%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 806 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 863
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 864 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER----VDLNEEETILII 919
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L GS +
Sbjct: 920 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 979
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEE--VDTLIPKHYL---PPIVRLCGKLEM 246
KG+ ++ N++M+LR ICNHPY+ Q H EE + L + + + R GK E+
Sbjct: 980 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEESFAEHLGYSNGVINGAELYRASGKFEL 1038
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+
Sbjct: 1039 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1098
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR
Sbjct: 1099 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1158
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXX 425
TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1159 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1218
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
R E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1219 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD- 1272
Query: 486 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEF 545
A E + + + +R ++ AL + + RA E + EE E
Sbjct: 1273 --AEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW---LRAIEDGNLEEMEEEVRL 1327
Query: 546 EKMCQAESSDSPKLKEEGLEKS 567
+K + + D KE+ +EK+
Sbjct: 1328 KKRKRRRNVDKDPAKED-VEKA 1348
Score = 44 (20.5 bits), Expect = 1.2e-94, Sum P(4) = 1.2e-94
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 526 RGKRAREVRSYEEQWTEEEFEKMCQAES-SDSPKLK 560
R K A+E S +E EEE E ++ES + S K+K
Sbjct: 1469 RQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVK 1504
Score = 43 (20.2 bits), Expect = 8.0e-95, Sum P(3) = 8.0e-95
Identities = 13/63 (20%), Positives = 33/63 (52%)
Query: 1958 IDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGS 2016
++GS +D + QSV + +++ +A+ + D S E+ + + + + + K + +
Sbjct: 1449 LEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLN 1508
Query: 2017 EKD 2019
+KD
Sbjct: 1509 KKD 1511
Score = 42 (19.8 bits), Expect = 1.2e-94, Sum P(4) = 1.2e-94
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 828 MQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSE 874
+ K + + + G RGK + P +SD + E N QSE
Sbjct: 1507 LNKKDEKGRDKGKGKKRPNRGKAK----PVVSDFDSDEEQDENEQSE 1549
Score = 40 (19.1 bits), Expect = 8.0e-95, Sum P(3) = 8.0e-95
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 59 KNASCKLNADLKHYQ 73
K ++ +N LKHYQ
Sbjct: 698 KQSALLINGTLKHYQ 712
Score = 39 (18.8 bits), Expect = 2.1e-94, Sum P(3) = 2.1e-94
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 2353 LAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVD--GAVALENTSEGMGGPSPP 2410
+A EEE + S++E + ES+ K ++ D G + G + P
Sbjct: 1472 IAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKP 1531
Query: 2411 LVIAEDKTENEIEED 2425
+V D E + E +
Sbjct: 1532 VVSDFDSDEEQDENE 1546
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 999 (356.7 bits), Expect = 1.0e-94, Sum P(3) = 1.0e-94
Identities = 236/562 (41%), Positives = 328/562 (58%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 822 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 879
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 880 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER----VDLNEEETILII 935
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L GS +
Sbjct: 936 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 995
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEE--VDTLIPKHYL---PPIVRLCGKLEM 246
KG+ ++ N++M+LR ICNHPY+ Q H EE + L + + + R GK E+
Sbjct: 996 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEESFAEHLGYSNGVINGAELYRASGKFEL 1054
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+
Sbjct: 1055 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1114
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR
Sbjct: 1115 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1174
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXX 425
TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1175 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1234
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
R E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1235 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD- 1288
Query: 486 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEF 545
A E + + + +R ++ AL + + RA E + EE E
Sbjct: 1289 --AEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW---LRAIEDGNLEEMEEEVRL 1343
Query: 546 EKMCQAESSDSPKLKEEGLEKS 567
+K + + D KE+ +EK+
Sbjct: 1344 KKRKRRRNVDKDPAKED-VEKA 1364
Score = 44 (20.5 bits), Expect = 1.0e-94, Sum P(3) = 1.0e-94
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 526 RGKRAREVRSYEEQWTEEEFEKMCQAES-SDSPKLK 560
R K A+E S +E EEE E ++ES + S K+K
Sbjct: 1503 RQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVK 1538
Score = 43 (20.2 bits), Expect = 1.3e-94, Sum P(3) = 1.3e-94
Identities = 40/175 (22%), Positives = 69/175 (39%)
Query: 2262 ANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKG 2321
+N+ ++ EG + RQ + LP S ++ E E KPV +K S G
Sbjct: 1408 SNSQLEIEGNSSGRQLSEVFIQLP-SRKELPEY-YELIRKPVDFKKIKERIRNHKYRSLG 1465
Query: 2322 P-DAEV-----SSQTA-IEGGGVV--SIPVPEEADGPASFLAAEEEKNECSDKEPVGSSV 2372
+ +V ++QT +EG + SI + +A EEE + S++E
Sbjct: 1466 DLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDE 1525
Query: 2373 SQIESKEPEAKAFEPMDVVD--GAVALENTSEGMGGPSPPLVIAEDKTENEIEED 2425
+ ES+ K ++ D G + G + P+V D E + E +
Sbjct: 1526 EESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDERE 1580
Score = 43 (20.2 bits), Expect = 3.7e-94, Sum P(4) = 3.7e-94
Identities = 13/63 (20%), Positives = 33/63 (52%)
Query: 1958 IDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGS 2016
++GS +D + QSV + +++ +A+ + D S E+ + + + + + K + +
Sbjct: 1483 LEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLN 1542
Query: 2017 EKD 2019
+KD
Sbjct: 1543 KKD 1545
Score = 41 (19.5 bits), Expect = 3.7e-94, Sum P(4) = 3.7e-94
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 867 SKSNLQSENNSGGLRLSK 884
S S L+ E NS G +LS+
Sbjct: 1408 SNSQLEIEGNSSGRQLSE 1425
Score = 40 (19.1 bits), Expect = 1.0e-94, Sum P(3) = 1.0e-94
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 59 KNASCKLNADLKHYQ 73
K ++ +N LKHYQ
Sbjct: 714 KQSALLINGTLKHYQ 728
Score = 38 (18.4 bits), Expect = 4.3e-94, Sum P(3) = 4.3e-94
Identities = 13/61 (21%), Positives = 30/61 (49%)
Query: 866 ESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQ 925
E +S ++++ ++L+K G+ ++ N+ + +P V + D + +Q EQ
Sbjct: 1525 EEESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKAKP--VVSDFD-SDEEQDEREQ 1581
Query: 926 S 926
S
Sbjct: 1582 S 1582
Score = 38 (18.4 bits), Expect = 1.2e-93, Sum P(4) = 1.2e-93
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 2174 QEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGD 2212
+EEE + S E++ + ES+ V+ ++++ + D
Sbjct: 1508 KEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDD 1546
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 999 (356.7 bits), Expect = 1.7e-94, Sum P(4) = 1.7e-94
Identities = 236/562 (41%), Positives = 328/562 (58%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 806 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 863
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 864 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER----VDLNEEETILII 919
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L GS +
Sbjct: 920 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 979
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEE--VDTLIPKHYL---PPIVRLCGKLEM 246
KG+ ++ N++M+LR ICNHPY+ Q H EE + L + + + R GK E+
Sbjct: 980 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEESFAEHLGYSNGVINGAELYRASGKFEL 1038
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+
Sbjct: 1039 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1098
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR
Sbjct: 1099 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1158
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXX 425
TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1159 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1218
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
R E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1219 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD- 1272
Query: 486 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEF 545
A E + + + +R ++ AL + + RA E + EE E
Sbjct: 1273 --AEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW---LRAIEDGNLEEMEEEVRL 1327
Query: 546 EKMCQAESSDSPKLKEEGLEKS 567
+K + + D KE+ +EK+
Sbjct: 1328 KKRKRRRNVDKDPAKED-VEKA 1348
Score = 44 (20.5 bits), Expect = 1.7e-94, Sum P(4) = 1.7e-94
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 526 RGKRAREVRSYEEQWTEEEFEKMCQAES-SDSPKLK 560
R K A+E S +E EEE E ++ES + S K+K
Sbjct: 1487 RQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVK 1522
Score = 43 (20.2 bits), Expect = 7.4e-94, Sum P(4) = 7.4e-94
Identities = 13/63 (20%), Positives = 33/63 (52%)
Query: 1958 IDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGS 2016
++GS +D + QSV + +++ +A+ + D S E+ + + + + + K + +
Sbjct: 1467 LEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLN 1526
Query: 2017 EKD 2019
+KD
Sbjct: 1527 KKD 1529
Score = 42 (19.8 bits), Expect = 1.7e-94, Sum P(4) = 1.7e-94
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 828 MQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSE 874
+ K + + + G RGK + P +SD + E N QSE
Sbjct: 1525 LNKKDEKGRDKGKGKKRPNRGKAK----PVVSDFDSDEEQDENEQSE 1567
Score = 42 (19.8 bits), Expect = 9.5e-94, Sum P(4) = 9.5e-94
Identities = 40/174 (22%), Positives = 68/174 (39%)
Query: 2263 NNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGP 2322
N+ ++ EG + RQ + LP S ++ E E KPV +K S G
Sbjct: 1393 NSQLEIEGNSSGRQLSEVFIQLP-SRKELPEY-YELIRKPVDFKKIKERIRNHKYRSLGD 1450
Query: 2323 -DAEV-----SSQTA-IEGGGVV--SIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVS 2373
+ +V ++QT +EG + SI + +A EEE + S++E
Sbjct: 1451 LEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEE 1510
Query: 2374 QIESKEPEAKAFEPMDVVD--GAVALENTSEGMGGPSPPLVIAEDKTENEIEED 2425
+ ES+ K ++ D G + G + P+V D E + E +
Sbjct: 1511 ESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDENE 1564
Score = 40 (19.1 bits), Expect = 1.7e-94, Sum P(4) = 1.7e-94
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 59 KNASCKLNADLKHYQ 73
K ++ +N LKHYQ
Sbjct: 698 KQSALLINGTLKHYQ 712
Score = 37 (18.1 bits), Expect = 7.4e-94, Sum P(4) = 7.4e-94
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 869 SNLQSENNSGGLRLSK 884
S L+ E NS G +LS+
Sbjct: 1394 SQLEIEGNSSGRQLSE 1409
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 997 (356.0 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 235/562 (41%), Positives = 328/562 (58%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFN LLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 829 KFNALLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 886
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 887 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER----VDLNEEETILII 942
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L GS +
Sbjct: 943 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 1002
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEE--VDTLIPKHYL---PPIVRLCGKLEM 246
KG+ ++ N++M+LR ICNHPY+ Q H EE + L + + + R GK E+
Sbjct: 1003 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEESFAEHLGYSNGVINGAELYRASGKFEL 1061
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+
Sbjct: 1062 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1121
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR
Sbjct: 1122 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1181
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXX 425
TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1182 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1241
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
R E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1242 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD- 1295
Query: 486 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEF 545
A E + + + +R ++ AL + + RA E + EE E
Sbjct: 1296 --AEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW---LRAIEDGNLEEMEEEVRL 1350
Query: 546 EKMCQAESSDSPKLKEEGLEKS 567
+K + + D +KE+ +EK+
Sbjct: 1351 KKRKRRRNVDKDPVKED-VEKA 1371
Score = 45 (20.9 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 833 QSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSE 874
+ R T G P R GK + P +SD + E N QSE
Sbjct: 1554 KGRDTGKGKKRPNR-GKAK----PVVSDFDSDEEQDENEQSE 1590
Score = 44 (20.5 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 526 RGKRAREVRSYEEQWTEEEFEKMCQAES-SDSPKLK 560
R K A+E S EE EEE E ++E+ + S K+K
Sbjct: 1510 RQKIAKEEESEEESNEEEEEEDEEESEAEAKSVKVK 1545
Score = 41 (19.5 bits), Expect = 3.1e-93, Sum P(4) = 3.1e-93
Identities = 41/174 (23%), Positives = 67/174 (38%)
Query: 2263 NNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGP 2322
N+ ++ EG + RQ + LP S ++ E E KPV +K S G
Sbjct: 1416 NSQLEIEGNSSGRQLSEVFIQLP-SRKELPEY-YELIRKPVDFKKIKERIRNHKYRSLGD 1473
Query: 2323 -DAEV-----SSQTA-IEGGGVV--SIPVPEEADGPASFLAAEEEKNECS--DKEPVGSS 2371
+ +V ++QT +EG + SI + +A EEE E S ++E
Sbjct: 1474 LEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEEDEE 1533
Query: 2372 VSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAEDKTENEIEED 2425
S+ E+K + K G + G + P+V D E + E +
Sbjct: 1534 ESEAEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQDENE 1587
Score = 40 (19.1 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 59 KNASCKLNADLKHYQ 73
K ++ +N LKHYQ
Sbjct: 721 KQSALLINGTLKHYQ 735
Score = 38 (18.4 bits), Expect = 6.3e-93, Sum P(4) = 6.3e-93
Identities = 12/63 (19%), Positives = 33/63 (52%)
Query: 1958 IDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGS 2016
++GS +D + QSV + +++ +A+ + + S E+ + + A + + K + +
Sbjct: 1490 LEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEEDEEESEAEAKSVKVKIKLN 1549
Query: 2017 EKD 2019
+K+
Sbjct: 1550 KKE 1552
Score = 37 (18.1 bits), Expect = 3.1e-93, Sum P(4) = 3.1e-93
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 869 SNLQSENNSGGLRLSK 884
S L+ E NS G +LS+
Sbjct: 1417 SQLEIEGNSSGRQLSE 1432
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 983 (351.1 bits), Expect = 7.5e-94, Sum P(3) = 7.5e-94
Identities = 215/479 (44%), Positives = 298/479 (62%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVL+TTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 824 KFNVLITTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 881
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 882 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER----VDLNEEETILII 937
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVE-ENL----GSIGN 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ + + GS +
Sbjct: 938 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKD 997
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEE--VDTL-IPKHYL--PPIVRLCGKLEM 246
KG+ ++ N++M+L+ ICNHPY+ Q H EE + L P + P + R GK E+
Sbjct: 998 KKGKGGAKTLMNTIMQLKKICNHPYMFQ-HIEESFAEHLGFPNGIISGPDLYRASGKFEL 1056
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKLKAT+HRVL F MT L+ ++EDY ++ + YLRLDG T DR L+ KFN+
Sbjct: 1057 LDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAMLLKKFNE 1116
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
+ S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR
Sbjct: 1117 EGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1176
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXX 425
TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + E
Sbjct: 1177 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNMEEDEVP 1236
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDD 484
R+E E ++F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1237 DDETLNQMIARNEDEFELFMRMDLDRRREDARNPKRKPRLMEED-----ELPSWILKDD 1290
Score = 51 (23.0 bits), Expect = 7.5e-94, Sum P(3) = 7.5e-94
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 959 MDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLP 1018
MDL D + + + +P L + VER+ + EEK S+ + +
Sbjct: 1258 MDLDRRREDARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKIFGRGSRHRRDVD 1317
Query: 1019 ALDSITE 1025
D++TE
Sbjct: 1318 YSDALTE 1324
Score = 45 (20.9 bits), Expect = 1.2e-93, Sum P(3) = 1.2e-93
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 524 YGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEE 562
+GRG R R Y + TE+++ + E + +++EE
Sbjct: 1306 FGRGSRHRRDVDYSDALTEKQWLRAI--EDGNLEEIEEE 1342
Score = 45 (20.9 bits), Expect = 1.2e-93, Sum P(3) = 1.2e-93
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 834 SRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENN 876
S++ + G +RR R P +SD + + + N QSE +
Sbjct: 1522 SKRDERGQDKGKRRPSR-GKAKPVVSDDDSDEDQEDNEQSEGS 1563
Score = 41 (19.5 bits), Expect = 7.5e-94, Sum P(3) = 7.5e-94
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 1072 SVPVKRHGRKTPTTGEAPRRRGKKQGSG-PSIPDGSAVFDAKLNQHSQNKSRD 1123
SV VK K G+ +R +G P + D + D + N+ S+ D
Sbjct: 1514 SVKVKIKLSKRDERGQDKGKRRPSRGKAKPVVSDDDSDEDQEDNEQSEGSQSD 1566
Score = 38 (18.4 bits), Expect = 1.5e-93, Sum P(3) = 1.5e-93
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1554 LLETPLDIKSIGGPIVSMKAADVADAD 1580
L+ P+D K I + S K V+D +
Sbjct: 1426 LIRKPVDFKKIKERVRSHKYRSVSDLE 1452
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 983 (351.1 bits), Expect = 9.9e-94, Sum P(2) = 9.9e-94
Identities = 232/573 (40%), Positives = 332/573 (57%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 852 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 965
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 966 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1025
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1081
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1082 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1141
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1142 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1201
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXX 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1202 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 1261
Query: 423 XXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
R E E D+F +D RR EE ++ R + D LPS ++
Sbjct: 1262 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIK 1316
Query: 483 DDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTE 542
DD A E + + + +++ ++ +L + + +++++ E+ T
Sbjct: 1317 DD---AEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQW-----LKQLKAAIEEGTL 1368
Query: 543 EEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSS 575
EE E+ + + S + ++ S PT + S
Sbjct: 1369 EEIEEEVRQKKSSRKRKRDSEAGSSTPTTSTRS 1401
Score = 44 (20.5 bits), Expect = 7.2e-93, Sum P(3) = 7.2e-93
Identities = 25/119 (21%), Positives = 45/119 (37%)
Query: 1188 AKKQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTE 1247
++K+ D + S TPT T + E+ + + A + P + +
Sbjct: 1381 SRKRKRDSEAGSSTPTTSTRSR--DKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVD 1438
Query: 1248 ALKPENKAQAGR-IENIANSSPDDKSLPMVPNLETAPPGFDIPIEK-HNEQSRNQNNPE 1304
A+ + +GR + + P K LP L P F E+ N + R+ N+ E
Sbjct: 1439 AVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLE 1497
Score = 43 (20.2 bits), Expect = 9.9e-94, Sum P(2) = 9.9e-94
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
G+ K Q RRR R + P +SD + E Q E+ SG
Sbjct: 1571 GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSDEE-----QEEDRSG 1612
Score = 43 (20.2 bits), Expect = 9.2e-93, Sum P(3) = 9.2e-93
Identities = 31/126 (24%), Positives = 46/126 (36%)
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
K D+ G TP + K E K + K GR P +K P PNL
Sbjct: 1385 KRDSEA-GSSTPTTSTRSRDKDEESKKQKKR--GR-------PPAEKLSPNPPNLTKKMK 1434
Query: 1285 GFDIPIEKHNEQSRNQNNPEV-----KGEETPVSSEAPASTEAFEQ--EKVTNTSSFVNL 1337
+ K+ + S + EV +E P E F++ E++ N + +L
Sbjct: 1435 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 1493
Query: 1338 ADLSSD 1343
DL D
Sbjct: 1494 NDLEKD 1499
Score = 42 (19.8 bits), Expect = 1.3e-93, Sum P(2) = 1.3e-93
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
IEK ++ ++ E +GEE SE+
Sbjct: 1535 IEKEDDSEGEESEEEEEGEEEGSESES 1561
Score = 41 (19.5 bits), Expect = 1.6e-93, Sum P(2) = 1.6e-93
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDD 736
GS+S S ++ GR + Q + RRR + P SDD
Sbjct: 1556 GSESESRSVKVKIK-LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDD 1600
Score = 41 (19.5 bits), Expect = 7.2e-93, Sum P(3) = 7.2e-93
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E E+ E ++E S ++ K + + D + G G + P V+++
Sbjct: 1545 ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGG----RRRPSRGSRAKP-VVSD 1599
Query: 2416 DKTENEIEED 2425
D ++ E EED
Sbjct: 1600 DDSDEEQEED 1609
Score = 39 (18.8 bits), Expect = 2.4e-92, Sum P(3) = 2.4e-92
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 1971 SVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDS 2022
++ EG+ E + E Q S ++ D A +TP T +KD +S
Sbjct: 1362 AIEEGTLEEIEEEVRQKKSSRKRKR-----DSEAGSSTPTTSTRSRDKDEES 1408
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 941 (336.3 bits), Expect = 1.0e-93, Sum P(2) = 1.0e-93
Identities = 225/572 (39%), Positives = 325/572 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 651 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 708
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 709 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 764
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 765 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 824
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 825 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 880
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 881 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 940
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 941 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1000
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXX 423
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L +++E
Sbjct: 1001 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRH 1060
Query: 424 XXXXXXXXXXXXRSESEIDVFESVDKQ--RREEEMATWRKLIRGLGTDGEPLP-----PL 476
+ V +++ + E+E+ + + + E L
Sbjct: 1061 CSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDL 1120
Query: 477 PSRLVTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSY 536
R + K M+ + P + + V+R + + +GRG R R+ Y
Sbjct: 1121 DRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLT--CEEEEEKMFGRGSRHRKEVDY 1178
Query: 537 EEQWTEEEFEKMCQA--ESSDSPKLKEEGLEK 566
+ TE+++ K +A E +++EE +K
Sbjct: 1179 SDSLTEKQWLKQLKAAIEEGTLEEIEEEVRQK 1210
Score = 39 (18.8 bits), Expect = 1.0e-93, Sum P(2) = 1.0e-93
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 1971 SVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDS 2022
++ EG+ E + E Q S ++ D A +TP T +KD +S
Sbjct: 1194 AIEEGTLEEIEEEVRQKKSSRKRKR-----DSEAGSSTPTTSTRSRDKDEES 1240
Score = 37 (18.1 bits), Expect = 1.7e-93, Sum P(2) = 1.7e-93
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPD 1269
K D+ G TP + K E K + K E ++ + P+
Sbjct: 1217 KRDSEA-GSSTPTTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPN 1260
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 981 (350.4 bits), Expect = 2.7e-93, Sum P(3) = 2.7e-93
Identities = 212/479 (44%), Positives = 300/479 (62%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KIQW Y+IIDEGHR+KN CKL L HY + +RLLL
Sbjct: 871 KFNVLLTTYEYVIK--DKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLL 928
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF + G+ II
Sbjct: 929 TGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK----VELNEEETILII 984
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGNSKG 198
RLH+VLRPF+LRRLK +VE++LP+K+E +++C+ SA Q++L K ++ L + G+ KG
Sbjct: 985 RRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKG 1044
Query: 199 R-------SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL---PPIVRLCGKLEMLD 248
+ ++ N++++LR +CNHP++ Q E+ H + P + R+ GK E+LD
Sbjct: 1045 KHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLD 1104
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
R+LPKLKAT+HRVL F MT+ + ++EDYL ++Q+ YLRLDG T DRG L+ KFN +
Sbjct: 1105 RILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKG 1164
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLLS RAGG+G+NLQ ADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR T
Sbjct: 1165 SDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMT 1224
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLREC--KKEEXXXXXX 426
V +VEE++ A+A +KL + + I AG FD ++ +R+++L+++L + ++EE
Sbjct: 1225 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPD 1284
Query: 427 XXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
RSE EI++F+ +D +R++E+ R L + E LP L DDD
Sbjct: 1285 DEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGRER-LIDESE----LPDWLTKDDD 1338
Score = 47 (21.6 bits), Expect = 2.7e-93, Sum P(3) = 2.7e-93
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 525 GRGKRAREVRSYEEQWTEEEFEK 547
GRG R R+ Y + TE+E+ K
Sbjct: 1354 GRGSRQRKEVDYTDSLTEKEWLK 1376
Score = 45 (20.9 bits), Expect = 2.7e-93, Sum P(3) = 2.7e-93
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 692 SQSASACPSTPMQPKGR---GRRIQSGEQVPRRRGKKIGLVLPAASDDI 737
++S ++ P+TP Q G S +Q R+R +K + DD+
Sbjct: 1589 NKSLASAPATPTQSSSNVSSGAATTSKKQTRRKRSQKKYTISDDDDDDM 1637
Score = 40 (19.1 bits), Expect = 6.4e-92, Sum P(3) = 6.4e-92
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 994 VERVNIQSFEEKACTNASKSKATLPALDSITE 1025
VER + Q E+ S+ + + DS+TE
Sbjct: 1340 VERFHYQYDEDTILGRGSRQRKEVDYTDSLTE 1371
Score = 39 (18.8 bits), Expect = 1.2e-92, Sum P(3) = 1.2e-92
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 1554 LLETPLDIKSIGGPIVSMKAADVADAD 1580
+++ P+DIK I I K AD+ + +
Sbjct: 1466 IIKRPVDIKKILQRIEDCKYADLNELE 1492
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 975 (348.3 bits), Expect = 4.6e-93, Sum P(2) = 4.6e-93
Identities = 235/573 (41%), Positives = 325/573 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 852 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 965
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 966 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1025
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1081
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1082 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1141
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1142 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1201
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXX 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1202 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 1261
Query: 423 XXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
R E E D+F +D RR EE ++ R + D LPS ++
Sbjct: 1262 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIK 1316
Query: 483 DDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTE 542
DD A E + + + R H +D Y ++ E+ T
Sbjct: 1317 DD---AEVERLTCEEEEEKMFG------RGSRHRKEVD---YSDSLTEKQWLKAIEEGTL 1364
Query: 543 EEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSS 575
EE E+ + + S + ++ S PT + S
Sbjct: 1365 EEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRS 1397
Score = 45 (20.9 bits), Expect = 4.6e-93, Sum P(2) = 4.6e-93
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQP 750
GS+S S ++ GR + Q + RRR + P SDD +E+
Sbjct: 1552 GSESESRSVKVKIK-LGRKEKAQDRLKGSRRRPSRGSRAKPVVSDD---------DSEEE 1601
Query: 751 QSESLNPSGGE 761
Q E + SG E
Sbjct: 1602 QEEDRSGSGSE 1612
Score = 45 (20.9 bits), Expect = 4.4e-92, Sum P(3) = 4.4e-92
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E E+ E ++E S ++ K + + D + G+ G + P V+++
Sbjct: 1541 ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGS----RRRPSRGSRAKP-VVSD 1595
Query: 2416 DKTENEIEED 2425
D +E E EED
Sbjct: 1596 DDSEEEQEED 1605
Score = 43 (20.2 bits), Expect = 7.4e-93, Sum P(2) = 7.4e-93
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
G+ K Q RRR R + P +SD + E Q E+ SG
Sbjct: 1567 GRKEKAQDRLKGSRRRPSRGSRAKPVVSDDDSEEE-----QEEDRSG 1608
Score = 42 (19.8 bits), Expect = 9.5e-93, Sum P(2) = 9.5e-93
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
IEK ++ ++ E +GEE SE+
Sbjct: 1531 IEKEDDSEGEESEEEEEGEEEGSESES 1557
Score = 41 (19.5 bits), Expect = 4.4e-92, Sum P(3) = 4.4e-92
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 1959 DGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEK 2018
D +EK + +++ EG+ E + E Q S ++ D A +TP T +K
Sbjct: 1348 DSLTEKQWL--KAIEEGTLEEIEEEVRQKKSSRKRKR-----DSDAGSSTPTTSTRSRDK 1400
Query: 2019 DPDS 2022
D +S
Sbjct: 1401 DDES 1404
Score = 40 (19.1 bits), Expect = 5.6e-92, Sum P(3) = 5.6e-92
Identities = 30/126 (23%), Positives = 46/126 (36%)
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
K D+ G TP + K + K + K GR P +K P PNL
Sbjct: 1381 KRDSDA-GSSTPTTSTRSRDKDDESKKQKKR--GR-------PPAEKLSPNPPNLTKKMK 1430
Query: 1285 GFDIPIEKHNEQSRNQNNPEV-----KGEETPVSSEAPASTEAFEQ--EKVTNTSSFVNL 1337
+ K+ + S + EV +E P E F++ E++ N + +L
Sbjct: 1431 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 1489
Query: 1338 ADLSSD 1343
DL D
Sbjct: 1490 NDLEKD 1495
Score = 39 (18.8 bits), Expect = 1.9e-91, Sum P(3) = 1.9e-91
Identities = 20/84 (23%), Positives = 32/84 (38%)
Query: 2287 SSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEA 2346
S + EE+ EG + SE S+ + L + + G + PV +
Sbjct: 1537 SEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGSRRRPSRGSRAKPVVSDD 1596
Query: 2347 DGPASFLAAEEEKNECSDKEPVGS 2370
D +EEE+ E D+ GS
Sbjct: 1597 D-------SEEEQEE--DRSGSGS 1611
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 974 (347.9 bits), Expect = 5.0e-93, Sum P(3) = 5.0e-93
Identities = 219/482 (45%), Positives = 295/482 (61%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 852 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 965
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 966 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1025
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1081
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1082 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1141
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1142 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1201
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXX 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1202 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 1261
Query: 423 XXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
R E E D+F +D RR EE ++ R + D LPS ++
Sbjct: 1262 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIK 1316
Query: 483 DD 484
DD
Sbjct: 1317 DD 1318
Score = 52 (23.4 bits), Expect = 5.0e-93, Sum P(3) = 5.0e-93
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 524 YGRGKRAREVRSYEEQWTEEEFEKMCQA----ESSDSPKLKEEGLEKSLPTVVSSSAP 577
+GRG R R+ Y + TE+++ K + E + + K+ ++ + SS P
Sbjct: 1334 FGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSEAGSSTP 1391
Score = 48 (22.0 bits), Expect = 4.8e-92, Sum P(4) = 4.8e-92
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 983 IPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITE 1025
+P + + VER+ + EEK S+ + + DS+TE
Sbjct: 1310 LPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTE 1352
Score = 44 (20.5 bits), Expect = 5.0e-93, Sum P(3) = 5.0e-93
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQP 750
GS+S S ++ GR + Q + RRR + P SDD +E+
Sbjct: 1551 GSESESRSVKVKIK-LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDD---------DSEEE 1600
Query: 751 QSESLNPSGGE 761
Q E + SG E
Sbjct: 1601 QEEDRSGSGSE 1611
Score = 44 (20.5 bits), Expect = 2.3e-92, Sum P(4) = 2.3e-92
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E E+ E ++E S ++ K + + D + G G + P V+++
Sbjct: 1540 ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGG----RRRPSRGSRAKP-VVSD 1594
Query: 2416 DKTENEIEED 2425
D +E E EED
Sbjct: 1595 DDSEEEQEED 1604
Score = 42 (19.8 bits), Expect = 8.1e-93, Sum P(3) = 8.1e-93
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
IEK ++ ++ E +GEE SE+
Sbjct: 1530 IEKEDDSEGEESEEEEEGEEEGSESES 1556
Score = 42 (19.8 bits), Expect = 8.1e-93, Sum P(3) = 8.1e-93
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
G+ K Q RRR R + P +SD + E Q E+ SG
Sbjct: 1566 GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE-----QEEDRSG 1607
Score = 41 (19.5 bits), Expect = 4.8e-92, Sum P(4) = 4.8e-92
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 1959 DGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEK 2018
D +EK + +++ EG+ E + E Q S ++ D A +TP T +K
Sbjct: 1348 DSLTEKQWL--KAIEEGTLEEIEEEVRQKKSSRKRKR-----DSEAGSSTPTTSTRSRDK 1400
Query: 2019 DPDS 2022
D +S
Sbjct: 1401 DEES 1404
Score = 40 (19.1 bits), Expect = 2.3e-92, Sum P(4) = 2.3e-92
Identities = 23/118 (19%), Positives = 43/118 (36%)
Query: 1188 AKKQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTE 1247
++K+ D + S TPT T + E+ + + A + P + +
Sbjct: 1377 SRKRKRDSEAGSSTPTTSTRSR--DKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVD 1434
Query: 1248 ALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEK-HNEQSRNQNNPE 1304
A+ + ++ + P K LP L P F E+ N + R+ N+ E
Sbjct: 1435 AVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLE 1492
Score = 39 (18.8 bits), Expect = 2.5e-92, Sum P(2) = 2.5e-92
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 503 VSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSD 555
V +G K K + + RG RA+ V S ++ E+E ++ D
Sbjct: 1561 VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1613
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 974 (347.9 bits), Expect = 5.9e-93, Sum P(3) = 5.9e-93
Identities = 219/482 (45%), Positives = 295/482 (61%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 844 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 901
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 902 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 957
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 958 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1017
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1018 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1073
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1074 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1133
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1134 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1193
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXX 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1194 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 1253
Query: 423 XXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
R E E D+F +D RR EE ++ R + D LPS ++
Sbjct: 1254 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIK 1308
Query: 483 DD 484
DD
Sbjct: 1309 DD 1310
Score = 51 (23.0 bits), Expect = 5.9e-93, Sum P(3) = 5.9e-93
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 524 YGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
+GRG R R+ Y + TE+++ K E +++EE +K
Sbjct: 1326 FGRGSRHRKEVDYSDSLTEKQWLKAI--EEGTLEEIEEEVRQK 1366
Score = 48 (22.0 bits), Expect = 4.4e-92, Sum P(4) = 4.4e-92
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 983 IPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITE 1025
+P + + VER+ + EEK S+ + + DS+TE
Sbjct: 1302 LPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTE 1344
Score = 44 (20.5 bits), Expect = 5.9e-93, Sum P(3) = 5.9e-93
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQP 750
GS+S S ++ GR + Q + RRR + P SDD +E+
Sbjct: 1544 GSESESRSVKVKIK-LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDD---------DSEEE 1593
Query: 751 QSESLNPSGGE 761
Q E + SG E
Sbjct: 1594 QEEDRSGSGSE 1604
Score = 44 (20.5 bits), Expect = 2.1e-92, Sum P(4) = 2.1e-92
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E E+ E ++E S ++ K + + D + G G + P V+++
Sbjct: 1533 ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGG----RRRPSRGSRAKP-VVSD 1587
Query: 2416 DKTENEIEED 2425
D +E E EED
Sbjct: 1588 DDSEEEQEED 1597
Score = 42 (19.8 bits), Expect = 9.6e-93, Sum P(3) = 9.6e-93
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
G+ K Q RRR R + P +SD + E Q E+ SG
Sbjct: 1559 GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE-----QEEDRSG 1600
Score = 42 (19.8 bits), Expect = 3.5e-92, Sum P(4) = 3.5e-92
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
IEK ++ ++ E +GEE SE+
Sbjct: 1523 IEKEDDSEGEESEEEEEGEEEGSESES 1549
Score = 41 (19.5 bits), Expect = 2.1e-92, Sum P(4) = 2.1e-92
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 1087 EAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSR 1122
++ R+R + +GPS P S K ++ + K R
Sbjct: 1367 KSSRKRKRDSDAGPSTPTTSTRSRDKDDESKKQKKR 1402
Score = 40 (19.1 bits), Expect = 5.6e-92, Sum P(4) = 5.6e-92
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 1959 DGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEK 2018
D +EK + +++ EG+ E + E Q S ++ D A +TP T +K
Sbjct: 1340 DSLTEKQWL--KAIEEGTLEEIEEEVRQKKSSRKRKR-----DSDAGPSTPTTSTRSRDK 1392
Query: 2019 DPDS 2022
D +S
Sbjct: 1393 DDES 1396
Score = 39 (18.8 bits), Expect = 2.4e-92, Sum P(2) = 2.4e-92
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 503 VSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSD 555
V +G K K + + RG RA+ V S ++ E+E ++ D
Sbjct: 1554 VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1606
Score = 39 (18.8 bits), Expect = 3.5e-92, Sum P(4) = 3.5e-92
Identities = 30/126 (23%), Positives = 46/126 (36%)
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
K D+ G TP + K + K + K GR P +K P PNL
Sbjct: 1373 KRDSDA-GPSTPTTSTRSRDKDDESKKQKKR--GR-------PPAEKLSPNPPNLTKKMK 1422
Query: 1285 GFDIPIEKHNEQSRNQNNPEV-----KGEETPVSSEAPASTEAFEQ--EKVTNTSSFVNL 1337
+ K+ + S + EV +E P E F++ E++ N + +L
Sbjct: 1423 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 1481
Query: 1338 ADLSSD 1343
DL D
Sbjct: 1482 NDLEKD 1487
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 974 (347.9 bits), Expect = 6.3e-93, Sum P(3) = 6.3e-93
Identities = 219/482 (45%), Positives = 295/482 (61%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 852 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 965
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 966 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1025
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1081
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1082 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1141
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1142 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1201
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXX 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1202 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 1261
Query: 423 XXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
R E E D+F +D RR EE ++ R + D LPS ++
Sbjct: 1262 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIK 1316
Query: 483 DD 484
DD
Sbjct: 1317 DD 1318
Score = 52 (23.4 bits), Expect = 6.3e-93, Sum P(3) = 6.3e-93
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 524 YGRGKRAREVRSYEEQWTEEEFEKMCQA----ESSDSPKLKEEGLEKSLPTVVSSSAP 577
+GRG R R+ Y + TE+++ K + E + + K+ ++ + SS P
Sbjct: 1334 FGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSEAGSSTP 1391
Score = 48 (22.0 bits), Expect = 1.0e-91, Sum P(4) = 1.0e-91
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 983 IPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITE 1025
+P + + VER+ + EEK S+ + + DS+TE
Sbjct: 1310 LPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTE 1352
Score = 43 (20.2 bits), Expect = 6.3e-93, Sum P(3) = 6.3e-93
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
G+ K Q RRR R + P +SD + E Q E+ SG
Sbjct: 1566 GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSDEE-----QEEDRSG 1607
Score = 42 (19.8 bits), Expect = 8.1e-93, Sum P(3) = 8.1e-93
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
IEK ++ ++ E +GEE SE+
Sbjct: 1530 IEKEDDSEGEESEEEEEGEEEGSESES 1556
Score = 41 (19.5 bits), Expect = 1.0e-92, Sum P(3) = 1.0e-92
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDD 736
GS+S S ++ GR + Q + RRR + P SDD
Sbjct: 1551 GSESESRSVKVKIK-LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDD 1595
Score = 41 (19.5 bits), Expect = 4.8e-92, Sum P(4) = 4.8e-92
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E E+ E ++E S ++ K + + D + G G + P V+++
Sbjct: 1540 ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGG----RRRPSRGSRAKP-VVSD 1594
Query: 2416 DKTENEIEED 2425
D ++ E EED
Sbjct: 1595 DDSDEEQEED 1604
Score = 41 (19.5 bits), Expect = 1.0e-91, Sum P(4) = 1.0e-91
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 1959 DGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEK 2018
D +EK + +++ EG+ E + E Q S ++ D A +TP T +K
Sbjct: 1348 DSLTEKQWL--KAIEEGTLEEIEEEVRQKKSSRKRKR-----DSEAGSSTPTTSTRSRDK 1400
Query: 2019 DPDS 2022
D +S
Sbjct: 1401 DEES 1404
Score = 40 (19.1 bits), Expect = 4.8e-92, Sum P(4) = 4.8e-92
Identities = 23/118 (19%), Positives = 43/118 (36%)
Query: 1188 AKKQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTE 1247
++K+ D + S TPT T + E+ + + A + P + +
Sbjct: 1377 SRKRKRDSEAGSSTPTTSTRSR--DKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVD 1434
Query: 1248 ALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEK-HNEQSRNQNNPE 1304
A+ + ++ + P K LP L P F E+ N + R+ N+ E
Sbjct: 1435 AVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLE 1492
Score = 38 (18.4 bits), Expect = 3.2e-92, Sum P(2) = 3.2e-92
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 503 VSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSD 555
V +G K K + + RG RA+ V S ++ E+E ++ D
Sbjct: 1561 VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSDEEQEEDRSGSGSEED 1613
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 974 (347.9 bits), Expect = 6.4e-93, Sum P(3) = 6.4e-93
Identities = 219/482 (45%), Positives = 295/482 (61%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 852 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 965
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 966 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1025
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1081
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1082 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1141
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1142 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1201
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXX 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1202 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 1261
Query: 423 XXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
R E E D+F +D RR EE ++ R + D LPS ++
Sbjct: 1262 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIK 1316
Query: 483 DD 484
DD
Sbjct: 1317 DD 1318
Score = 52 (23.4 bits), Expect = 6.4e-93, Sum P(3) = 6.4e-93
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 524 YGRGKRAREVRSYEEQWTEEEFEKMCQA----ESSDSPKLKEEGLEKSLPTVVSSSAP 577
+GRG R R+ Y + TE+++ K + E + + K+ ++ + SS P
Sbjct: 1334 FGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSEAGSSTP 1391
Score = 48 (22.0 bits), Expect = 4.9e-92, Sum P(4) = 4.9e-92
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 983 IPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITE 1025
+P + + VER+ + EEK S+ + + DS+TE
Sbjct: 1310 LPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTE 1352
Score = 44 (20.5 bits), Expect = 1.9e-92, Sum P(4) = 1.9e-92
Identities = 25/119 (21%), Positives = 45/119 (37%)
Query: 1188 AKKQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTE 1247
++K+ D + S TPT T + E+ + + A + P + +
Sbjct: 1377 SRKRKRDSEAGSSTPTTSTRSR--DKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVD 1434
Query: 1248 ALKPENKAQAGR-IENIANSSPDDKSLPMVPNLETAPPGFDIPIEK-HNEQSRNQNNPE 1304
A+ + +GR + + P K LP L P F E+ N + R+ N+ E
Sbjct: 1435 AVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLE 1493
Score = 43 (20.2 bits), Expect = 6.4e-93, Sum P(3) = 6.4e-93
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
G+ K Q RRR R + P +SD + E Q E+ SG
Sbjct: 1567 GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSDEE-----QEEDRSG 1608
Score = 43 (20.2 bits), Expect = 2.4e-92, Sum P(4) = 2.4e-92
Identities = 31/126 (24%), Positives = 46/126 (36%)
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
K D+ G TP + K E K + K GR P +K P PNL
Sbjct: 1381 KRDSEA-GSSTPTTSTRSRDKDEESKKQKKR--GR-------PPAEKLSPNPPNLTKKMK 1430
Query: 1285 GFDIPIEKHNEQSRNQNNPEV-----KGEETPVSSEAPASTEAFEQ--EKVTNTSSFVNL 1337
+ K+ + S + EV +E P E F++ E++ N + +L
Sbjct: 1431 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 1489
Query: 1338 ADLSSD 1343
DL D
Sbjct: 1490 NDLEKD 1495
Score = 42 (19.8 bits), Expect = 8.2e-93, Sum P(3) = 8.2e-93
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
IEK ++ ++ E +GEE SE+
Sbjct: 1531 IEKEDDSEGEESEEEEEGEEEGSESES 1557
Score = 41 (19.5 bits), Expect = 1.0e-92, Sum P(3) = 1.0e-92
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDD 736
GS+S S ++ GR + Q + RRR + P SDD
Sbjct: 1552 GSESESRSVKVKIK-LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDD 1596
Score = 41 (19.5 bits), Expect = 1.9e-92, Sum P(4) = 1.9e-92
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E E+ E ++E S ++ K + + D + G G + P V+++
Sbjct: 1541 ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGG----RRRPSRGSRAKP-VVSD 1595
Query: 2416 DKTENEIEED 2425
D ++ E EED
Sbjct: 1596 DDSDEEQEED 1605
Score = 41 (19.5 bits), Expect = 1.0e-91, Sum P(4) = 1.0e-91
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 1959 DGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEK 2018
D +EK + +++ EG+ E + E Q S ++ D A +TP T +K
Sbjct: 1348 DSLTEKQWL--KAIEEGTLEEIEEEVRQKKSSRKRKR-----DSEAGSSTPTTSTRSRDK 1400
Query: 2019 DPDS 2022
D +S
Sbjct: 1401 DEES 1404
Score = 38 (18.4 bits), Expect = 3.2e-92, Sum P(2) = 3.2e-92
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 503 VSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSD 555
V +G K K + + RG RA+ V S ++ E+E ++ D
Sbjct: 1562 VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSDEEQEEDRSGSGSEED 1614
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 961 (343.3 bits), Expect = 1.3e-91, Sum P(4) = 1.3e-91
Identities = 215/482 (44%), Positives = 293/482 (60%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVL+TTYEY++ D+ L+K++W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 864 KFNVLVTTYEYIIK--DKQVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLL 921
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 922 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 977
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 978 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1037
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1038 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGSDLYRASGK 1093
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1094 FELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKN 1153
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1154 FNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1213
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXX 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1214 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 1273
Query: 423 XXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
RSE E D F +D RR EE ++ R + D LP+ ++
Sbjct: 1274 EVPDDETVNQMIARSEEEFDHFMRMDLDRRREEARNPKRRPRLMEED-----ELPTWIMK 1328
Query: 483 DD 484
DD
Sbjct: 1329 DD 1330
Score = 53 (23.7 bits), Expect = 1.3e-91, Sum P(4) = 1.3e-91
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 524 YGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEE 562
+GRG R R+ Y + TE+++ K + + D +++EE
Sbjct: 1346 FGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLD--EIEEE 1382
Score = 51 (23.0 bits), Expect = 1.3e-91, Sum P(4) = 1.3e-91
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 1395 EVFKPENKTDGDSVEKLEDTVDDHS 1419
++ K E +++GD E+ ED VD+ S
Sbjct: 1544 KIEKEEEESEGDDSEEEEDDVDEGS 1568
Score = 51 (23.0 bits), Expect = 1.3e-91, Sum P(4) = 1.3e-91
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 2356 EEEKNECSDKEPVGSSV---SQIESKEPEAKA-FEPMDVVDGAVALENTSEGMGGPSPPL 2411
EEE++E D E V S+ ES+ + K D + T P P
Sbjct: 1548 EEEESEGDDSEEEEDDVDEGSESESRSVKVKIKLSRKDKAERGKGRRRTGRS-SRPKP-- 1604
Query: 2412 VIAEDKTENEIEED 2425
V+++D +E + EE+
Sbjct: 1605 VVSDDDSEEDQEEE 1618
Score = 50 (22.7 bits), Expect = 1.3e-91, Sum P(4) = 1.3e-91
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 983 IPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITE 1025
+P + + VER+ + EEK S+ + + DS+TE
Sbjct: 1322 LPTWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTE 1364
Score = 44 (20.5 bits), Expect = 5.4e-91, Sum P(4) = 5.4e-91
Identities = 24/97 (24%), Positives = 39/97 (40%)
Query: 440 EIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT-DDDLKALYEAMKIYDA 498
E + ++++ R ++ RK R L G P R DDD K + K
Sbjct: 1372 EEGTLDEIEEEVRHKKTTRKRKRDRDLDLPGPATPSSSGRSRDKDDDGK---KQKKRGRP 1428
Query: 499 PKTGVSPNVG--VKRKGEHLGALDTQHYGRGKRAREV 533
P +SPN K+ + + A+ G G++ EV
Sbjct: 1429 PAEKLSPNPPSLTKKMKKTVDAVIKYKDGNGRQLSEV 1465
Score = 43 (20.2 bits), Expect = 1.3e-91, Sum P(4) = 1.3e-91
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 2268 AEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKE 2308
AE G R+T P+ S D EE E GSE++
Sbjct: 1587 AERGKGRRRTGRSSRPKPVVSDDDSEEDQEEEHSASGSEED 1627
Score = 42 (19.8 bits), Expect = 2.1e-91, Sum P(3) = 2.1e-91
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 834 SRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGG 879
SRK ++ RRR R + P +SD +S+ + + E+++ G
Sbjct: 1582 SRKDKAERGKGRRRTGRSSRPKPVVSD----DDSEEDQEEEHSASG 1623
Score = 40 (19.1 bits), Expect = 1.3e-91, Sum P(4) = 1.3e-91
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 830 TKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPES 867
+ G+SR G ++RG+ PP +S P S
Sbjct: 1408 SSGRSRDKDDDGKKQKKRGR------PPAEKLSPNPPS 1439
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 951 (339.8 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 195/439 (44%), Positives = 281/439 (64%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLLT 81
FNVL+TTYEY++ ++ L KI+W Y+IIDEGHR+KN +CKL L + + HRLLLT
Sbjct: 632 FNVLMTTYEYVIK--EKALLGKIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLT 689
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP IF+S F QWFN PF + G+ II
Sbjct: 690 GTPLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEK----VELNQEETMLIIR 745
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
RLH+VLRPF+LRRLK +VE++LP+K E +++C+ SA QK++ + +++ L + +S R
Sbjct: 746 RLHKVLRPFLLRRLKKEVESQLPDKTEYVIKCDQSALQKVIYRHMQKGLLLDAKMSSGAR 805
Query: 200 SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL--PPIVRLCGKLEMLDRLLPKLKAT 257
S+ N+V+ LR +CNHP+L + + + ++R+ GKLE+LDR+LPKLKAT
Sbjct: 806 SLMNTVVHLRKLCNHPFLFPNIEDSCRAYWKVNEVNGTDLMRVAGKLELLDRILPKLKAT 865
Query: 258 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 317
HR+L F MT ++++ ED+L F++Y YLRLDG T +RG L+ +FN +S F+F+LS
Sbjct: 866 GHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLS 925
Query: 318 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 377
RAGG+G+NLQ ADTVIIFD+DWNP D+QAQ RAHRIGQK++V VLR T +VEE++
Sbjct: 926 TRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKIL 985
Query: 378 ASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXXXXXXXXXXXXXXXR 436
A+A +KL V + I AG FD ++ +R++ LE +++ + ++EE R
Sbjct: 986 AAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQIIQADGEEEEEEEVPDDETVNQMVAR 1045
Query: 437 SESEIDVFESVDKQRREEE 455
SE E ++F+S+D RR EE
Sbjct: 1046 SEEEFNIFQSMDIDRRREE 1064
Score = 52 (23.4 bits), Expect = 4.6e-91, Sum P(3) = 4.6e-91
Identities = 35/122 (28%), Positives = 50/122 (40%)
Query: 2258 PDAEANNIIDA---EGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSK--PVGSEKESIAS 2312
P A+A A + GGN Q L L S + ++ + +K P EK+ +S
Sbjct: 1346 PPAQAQQFQQALMTQTGGN------QALMLQYMQSAMLAQRAQASTKVTPKKDEKKETSS 1399
Query: 2313 AVPLDESKGPDAEVSSQTAIEGGGVVSIPVP----EEADGPASFLAAEEEKNECSDKEPV 2368
+V +E+K D E S+ +A S P P E D EEE+ KEP
Sbjct: 1400 SVKTEEAKKDD-EPSTSSA-------SAPPPKKKKESEDSEDPMEEDEEEEIIGQKKEPA 1451
Query: 2369 GS 2370
S
Sbjct: 1452 SS 1453
Score = 51 (23.0 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDV 2390
EEE+ E D E V V++ E E F+ MD+
Sbjct: 1027 EEEEEEVPDDETVNQMVAR---SEEEFNIFQSMDI 1058
Score = 46 (21.3 bits), Expect = 5.2e-90, Sum P(3) = 5.2e-90
Identities = 24/142 (16%), Positives = 50/142 (35%)
Query: 738 PSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSS 797
P P +P ++P + S + S ST+ +VS + + + ++ P+
Sbjct: 1291 PKPVEEPVKKKEPSTPSTS-SSRPSTSGTPSVSDLQRTQQATAQQMLMLMTHMQSLPPAQ 1349
Query: 798 AVA---ALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALG 854
A AL ++ N A TK +K + + + +
Sbjct: 1350 AQQFQQALMTQTGGNQALMLQYMQSAMLAQRAQASTKVTPKKDEKKETSSSVKTEEAKKD 1409
Query: 855 SPPISDVSAGPESKSNLQSENN 876
P + ++ P K +SE++
Sbjct: 1410 DEPSTSSASAPPPKKKKESEDS 1431
Score = 43 (20.2 bits), Expect = 4.6e-91, Sum P(3) = 4.6e-91
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 921 KPAEQSVRVVQSNQPINLPATHDSSSQPSGS-TPA 954
KP E+ V+ +P + P+T SSS+PS S TP+
Sbjct: 1292 KPVEEPVK---KKEP-STPST--SSSRPSTSGTPS 1320
Score = 43 (20.2 bits), Expect = 1.1e-89, Sum P(3) = 1.1e-89
Identities = 14/65 (21%), Positives = 27/65 (41%)
Query: 1268 PDDKSLPMVPNLETAPPGFD-IPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQE 1326
P K P P+ ++ P P ++++ ++ T + S PA + F+Q
Sbjct: 1297 PVKKKEPSTPSTSSSRPSTSGTPSVSDLQRTQQATAQQMLMLMTHMQSLPPAQAQQFQQA 1356
Query: 1327 KVTNT 1331
+T T
Sbjct: 1357 LMTQT 1361
Score = 40 (19.1 bits), Expect = 9.5e-91, Sum P(3) = 9.5e-91
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 540 WTEEEFEKMCQAESSDSPKLKEEGLEKSLPTV--VSSSAPAVYST 582
W +E+++K + PK EE ++K P+ SSS P+ T
Sbjct: 1280 W-KEQYDKFM-----NPPKPVEEPVKKKEPSTPSTSSSRPSTSGT 1318
Score = 39 (18.8 bits), Expect = 5.2e-90, Sum P(3) = 5.2e-90
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 2004 ASLATPEEKTEGSEKDPDSSFAAQEDPKESVV 2035
AS P++K E SE DS +ED +E ++
Sbjct: 1417 ASAPPPKKKKE-SE---DSEDPMEEDEEEEII 1444
Score = 38 (18.4 bits), Expect = 1.4e-89, Sum P(3) = 1.4e-89
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 1868 DHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDP 1910
D + S V E +K +E S S+ ++K + +DP
Sbjct: 1392 DEKKETSSSVKTEEAKKDDEPSTSSASAPPPKKKKESEDSEDP 1434
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 951 (339.8 bits), Expect = 2.5e-90, Sum P(2) = 2.5e-90
Identities = 218/482 (45%), Positives = 294/482 (60%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 844 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 901
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 902 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 957
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 958 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1017
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1018 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1073
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1074 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLT- 1132
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FI LLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1133 FNEPGSEYFI-LLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1191
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKKEEXX 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1192 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 1251
Query: 423 XXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
R E E D+F +D RR EE ++ R + D LPS ++
Sbjct: 1252 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIK 1306
Query: 483 DD 484
DD
Sbjct: 1307 DD 1308
Score = 316 (116.3 bits), Expect = 4.9e-20, Sum P(4) = 4.9e-20
Identities = 94/278 (33%), Positives = 144/278 (51%)
Query: 312 FIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQT 371
+ LLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV +
Sbjct: 1140 YFILLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1199
Query: 372 VEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXX 431
VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L +++E
Sbjct: 1200 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE----------- 1248
Query: 432 XXXXRSESEIDVFESVDKQ--RREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKAL 489
E E+ E+V++ R EEE + ++ + P RL+ +D+L
Sbjct: 1249 -----EEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL--- 1300
Query: 490 YEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSY-----EEQW---- 540
P + + V+R + + +GRG R R+ Y E+QW
Sbjct: 1301 ---------PSWIIKDDAEVERLT--CEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAI 1349
Query: 541 ---TEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSS 575
T EE E+ + + S + ++ S PT + S
Sbjct: 1350 EEGTLEEIEEEVRQKKSSRKRKRDSDAGPSTPTTSTRS 1387
Score = 48 (22.0 bits), Expect = 1.9e-89, Sum P(4) = 1.9e-89
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 983 IPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITE 1025
+P + + VER+ + EEK S+ + + DS+TE
Sbjct: 1300 LPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTE 1342
Score = 45 (20.9 bits), Expect = 4.9e-20, Sum P(4) = 4.9e-20
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 156 KHKVENELPEK--IERLVRCEASAYQKLLMKRVEENL 190
+ K ENE EK + RL+ + Y+KL+ ++ ++ L
Sbjct: 506 EQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRL 542
Score = 44 (20.5 bits), Expect = 2.5e-90, Sum P(2) = 2.5e-90
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQP 750
GS+S S ++ GR + Q + RRR + P SDD +E+
Sbjct: 1542 GSESESRSVKVKIK-LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDD---------DSEEE 1591
Query: 751 QSESLNPSGGE 761
Q E + SG E
Sbjct: 1592 QEEDRSGSGSE 1602
Score = 44 (20.5 bits), Expect = 1.9e-89, Sum P(4) = 1.9e-89
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E E+ E ++E S ++ K + + D + G G + P V+++
Sbjct: 1531 ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGG----RRRPSRGSRAKP-VVSD 1585
Query: 2416 DKTENEIEED 2425
D +E E EED
Sbjct: 1586 DDSEEEQEED 1595
Score = 42 (19.8 bits), Expect = 4.0e-90, Sum P(2) = 4.0e-90
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
G+ K Q RRR R + P +SD + E Q E+ SG
Sbjct: 1557 GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE-----QEEDRSG 1598
Score = 42 (19.8 bits), Expect = 3.0e-89, Sum P(4) = 3.0e-89
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
IEK ++ ++ E +GEE SE+
Sbjct: 1521 IEKEDDSEGEESEEEEEGEEEGSESES 1547
Score = 41 (19.5 bits), Expect = 1.9e-89, Sum P(4) = 1.9e-89
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 1087 EAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSR 1122
++ R+R + +GPS P S K ++ + K R
Sbjct: 1365 KSSRKRKRDSDAGPSTPTTSTRSRDKDDESKKQKKR 1400
Score = 40 (19.1 bits), Expect = 2.4e-89, Sum P(4) = 2.4e-89
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 1959 DGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEK 2018
D +EK + +++ EG+ E + E Q S ++ D A +TP T +K
Sbjct: 1338 DSLTEKQWL--KAIEEGTLEEIEEEVRQKKSSRKRKR-----DSDAGPSTPTTSTRSRDK 1390
Query: 2019 DPDS 2022
D +S
Sbjct: 1391 DDES 1394
Score = 39 (18.8 bits), Expect = 8.3e-90, Sum P(2) = 8.3e-90
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 503 VSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSD 555
V +G K K + + RG RA+ V S ++ E+E ++ D
Sbjct: 1552 VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1604
Score = 39 (18.8 bits), Expect = 3.0e-89, Sum P(4) = 3.0e-89
Identities = 30/126 (23%), Positives = 46/126 (36%)
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
K D+ G TP + K + K + K GR P +K P PNL
Sbjct: 1371 KRDSDA-GPSTPTTSTRSRDKDDESKKQKKR--GR-------PPAEKLSPNPPNLTKKMK 1420
Query: 1285 GFDIPIEKHNEQSRNQNNPEV-----KGEETPVSSEAPASTEAFEQ--EKVTNTSSFVNL 1337
+ K+ + S + EV +E P E F++ E++ N + +L
Sbjct: 1421 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 1479
Query: 1338 ADLSSD 1343
DL D
Sbjct: 1480 NDLEKD 1485
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 913 (326.5 bits), Expect = 4.1e-89, Sum P(2) = 4.1e-89
Identities = 205/493 (41%), Positives = 300/493 (60%)
Query: 15 REKIVHQ----KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK 70
R + HQ F+VLLTTYEY++ D+ LSK W ++IIDEGHR+KNA KL+ +
Sbjct: 557 RHSLQHQIRVGNFDVLLTTYEYIIK--DKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTIS 614
Query: 71 HY-QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXX 129
HY ++ +RL+LTGTP IFNS++ F WFN PF + G + +
Sbjct: 615 HYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTG--TQEKL 672
Query: 130 XXXXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EE 188
II RLH+VLRPF+LRRLK +VE +LP+K+E++++C+ S Q+ L +++ +
Sbjct: 673 ELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKH 732
Query: 189 NL-----GSIGNSKG--RSVHNSVMELRNICNHPYLSQLHAEEVDTLI-PKHYLPPIV-R 239
N G+ G +KG + ++N +M+LR ICNHP++ +EV+ ++ P ++ R
Sbjct: 733 NALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVF----DEVEGVVNPSRGNSDLLFR 788
Query: 240 LCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGA 299
+ GK E+LDR+LPK KA+ HRVL F MT+++D+MED+L K +Y+RLDG T +R
Sbjct: 789 VAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTE 848
Query: 300 LIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKR 359
+++ FN DS +F FLLS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQK
Sbjct: 849 MLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKN 908
Query: 360 DVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-ECKK 418
+V +LR T +VEE + A KL + + I AG FDN ++AE++ +L L+ E +
Sbjct: 909 EVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNR 968
Query: 419 EEXXXXXXXXXXXXXX-XRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLP 477
++ RS E +F+ +DK+R +E A + +GL +PP P
Sbjct: 969 DDDDKAELDDDELNDTLARSADEKILFDKIDKERMNQERADAKA--QGLR-----VPP-P 1020
Query: 478 SRLVTDDDLKALY 490
RL+ D+L ++
Sbjct: 1021 -RLIQLDELPKVF 1032
Score = 63 (27.2 bits), Expect = 4.1e-89, Sum P(2) = 4.1e-89
Identities = 28/123 (22%), Positives = 49/123 (39%)
Query: 1084 TTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADVND 1143
TT +RR ++ SI + K N ++ S+++ G+K + K + ++ +
Sbjct: 1139 TTASRSKRRSSRKKRTISI----VTAEDKENTQEESTSQENGGAK-VEEEVKSSSVEIIN 1193
Query: 1144 VARVMKEIFSETCSSKA-KTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVTP 1202
+ K+ T K KT N+GK AKK + K+ + P
Sbjct: 1194 GSESKKKKPKLTVKIKLNKTTVLENNDGKRAEEKPESKSPAKKTAAKKTKTKSKSLGIFP 1253
Query: 1203 TVE 1205
TVE
Sbjct: 1254 TVE 1256
Score = 48 (22.0 bits), Expect = 5.1e-87, Sum P(3) = 5.1e-87
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 1284 PGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTS 1332
P + I K N+ + +NN + EE P S++PA A ++ K + S
Sbjct: 1202 PKLTVKI-KLNKTTVLENNDGKRAEEKP-ESKSPAKKTAAKKTKTKSKS 1248
Score = 46 (21.3 bits), Expect = 2.6e-87, Sum P(2) = 2.6e-87
Identities = 23/106 (21%), Positives = 39/106 (36%)
Query: 2286 LSSSDVEEEKIEGFSK-PVGSEKESIAS---AVPLDESKGPDAEVSSQTAIEGGG----V 2337
L + +E +IE P SE I + +DE D E ++ +
Sbjct: 1095 LRQNGTKENEIETLENTPEASETSLIENNSFTAAVDEETNADKETTASRSKRRSSRKKRT 1154
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAK 2383
+SI E+ + ++E ++E SSV I E + K
Sbjct: 1155 ISIVTAEDKENTQEESTSQENGGAKVEEEVKSSSVEIINGSESKKK 1200
Score = 43 (20.2 bits), Expect = 1.7e-86, Sum P(3) = 1.7e-86
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 1291 EKHNEQSRNQNNPEVKGEETPVSS--EAPASTEAFEQE-------KVTNTSSFVNLADLS 1341
E E+S +Q N K EE SS E +E+ +++ K+ T+ N
Sbjct: 1164 ENTQEESTSQENGGAKVEEEVKSSSVEIINGSESKKKKPKLTVKIKLNKTTVLENNDGKR 1223
Query: 1342 SDDKTCSVTPAMETA 1356
+++K S +PA +TA
Sbjct: 1224 AEEKPESKSPAKKTA 1238
Score = 42 (19.8 bits), Expect = 5.1e-87, Sum P(3) = 5.1e-87
Identities = 15/82 (18%), Positives = 32/82 (39%)
Query: 845 RRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQ-ELSNKIQ 903
RRR ++ I + PE+ ENNS + + + K+ S+ + + +
Sbjct: 1092 RRRLRQNGTKENEIETLENTPEASETSLIENNSFTAAVDEETNADKETTASRSKRRSSRK 1151
Query: 904 VQPCGVATSADVAGPDQKPAEQ 925
+ + T+ D ++ Q
Sbjct: 1152 KRTISIVTAEDKENTQEESTSQ 1173
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 902 (322.6 bits), Expect = 1.0e-88, Sum P(3) = 1.0e-88
Identities = 206/483 (42%), Positives = 290/483 (60%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL-KHYQSSHRLLLT 81
F ++LTT+EY++ D+ L +I+W ++IIDEGHR+KNA+ KL+ L ++Y S +RL+LT
Sbjct: 880 FQLVLTTFEYVIK--DKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILT 937
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP IFNS + F +WFN PF + G D +I
Sbjct: 938 GTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQ--DKIELTEEETLLVIR 995
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQ-KLLMKRVEENLGSIGNSKGRS 200
RLH+VLRPF+LRRLK VE +LP K+E++V+C++SA Q KL + + N+ G+ S
Sbjct: 996 RLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANGS 1055
Query: 201 V-------HNSVMELRNICNHPYLSQLHAEEVDTLI-PK-HYLPPIVRLCGKLEMLDRLL 251
V +N +M+L+ ICNHP++ EEV+ LI P I R+ GK E+LD++L
Sbjct: 1056 VPVTIKNANNQIMQLKKICNHPFVY----EEVENLINPNIETNDQIWRVAGKFELLDKVL 1111
Query: 252 PKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPF 311
PK KAT H+VL F MT+++++MED+L F+ +Y+RLDG T DR L+ FN DS +
Sbjct: 1112 PKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDY 1171
Query: 312 FIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQT 371
F FLLS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQK +V +LR T +
Sbjct: 1172 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENS 1231
Query: 372 VEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXX 431
VEE + A KL + + I AG FDN ++AE++ L +L+ K++E
Sbjct: 1232 VEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIE--KEDERRQKGGTD--- 1286
Query: 432 XXXXRSESEIDVFE-SVDKQRREEEMATWRKLI--RGLGTDGEPLPPLPSRLVTDDDLKA 488
E ++D E + R E E+ +RK+ R L T P P SRL T+++L
Sbjct: 1287 ----EEEEDLDDDELNQIIARNENELVVFRKMDEERYLATKNAPYP---SRLYTEEELPE 1339
Query: 489 LYE 491
+Y+
Sbjct: 1340 IYK 1342
Score = 83 (34.3 bits), Expect = 1.0e-88, Sum P(3) = 1.0e-88
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 475 PLPSRLVTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVR 534
P PSRL T+++L +Y+ + P K++ + ++ YGRG R R++
Sbjct: 1326 PYPSRLYTEEELPEIYK-----------IDPEELFKKED-----VASEEYGRGARERKIL 1369
Query: 535 SYEEQWTEEEFEKMCQAESSD 555
Y++ TEE++ K + SD
Sbjct: 1370 QYDDNLTEEQWLKKIEGMVSD 1390
Score = 51 (23.0 bits), Expect = 1.0e-88, Sum P(3) = 1.0e-88
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 685 FVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDP 744
F+P P Q ++ T +GRGR G R RG+ G +L + + D
Sbjct: 1454 FIP--PKRQKSATPGGTTTSGRGRGRGRGRGRGRGRGRGR--GSLLSRYTPSVDPLTADE 1509
Query: 745 KTNEQPQSESL 755
++ Q Q E++
Sbjct: 1510 RSTLQNQIENI 1520
Score = 44 (20.5 bits), Expect = 9.1e-85, Sum P(2) = 9.1e-85
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 542 EEEFEKMCQAESSDSPKLKEE---GLEKSLP 569
E + EK+ + E+ DSP L G E+S P
Sbjct: 1656 EAKLEKIDKGEAIDSPLLNASTTAGTEESTP 1686
Score = 40 (19.1 bits), Expect = 2.4e-84, Sum P(2) = 2.4e-84
Identities = 21/76 (27%), Positives = 32/76 (42%)
Query: 2003 PASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPP 2062
P+ L T EE E + DP+ F KE V A ++ G +++ +D T
Sbjct: 1328 PSRLYTEEELPEIYKIDPEELFK-----KEDV--ASEEYGRGARERKILQY--DDNLTEE 1378
Query: 2063 LSLANEEEMIEGFDND 2078
L E M+ D+D
Sbjct: 1379 QWLKKIEGMVSDDDDD 1394
Score = 39 (18.8 bits), Expect = 1.8e-87, Sum P(3) = 1.8e-87
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 1367 VEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEK-LEDTVDD 1417
V+ S +E++AK K + VA +E + + ++D SV++ + DD
Sbjct: 1402 VDMSDSEMEAKPKKPKGRRGRKPKVARVEDEESQTESDVISVKRQFPEDADD 1453
Score = 38 (18.4 bits), Expect = 2.3e-87, Sum P(3) = 2.3e-87
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 831 KGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
+G+ R G R RG + +P + ++A S Q EN G
Sbjct: 1475 RGRGRGRGRGRGRGRGRGSLLSRYTPSVDPLTADERSTLQNQIENILG 1522
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 902 (322.6 bits), Expect = 1.0e-88, Sum P(3) = 1.0e-88
Identities = 206/483 (42%), Positives = 290/483 (60%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL-KHYQSSHRLLLT 81
F ++LTT+EY++ D+ L +I+W ++IIDEGHR+KNA+ KL+ L ++Y S +RL+LT
Sbjct: 880 FQLVLTTFEYVIK--DKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILT 937
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP IFNS + F +WFN PF + G D +I
Sbjct: 938 GTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQ--DKIELTEEETLLVIR 995
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQ-KLLMKRVEENLGSIGNSKGRS 200
RLH+VLRPF+LRRLK VE +LP K+E++V+C++SA Q KL + + N+ G+ S
Sbjct: 996 RLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANGS 1055
Query: 201 V-------HNSVMELRNICNHPYLSQLHAEEVDTLI-PK-HYLPPIVRLCGKLEMLDRLL 251
V +N +M+L+ ICNHP++ EEV+ LI P I R+ GK E+LD++L
Sbjct: 1056 VPVTIKNANNQIMQLKKICNHPFVY----EEVENLINPNIETNDQIWRVAGKFELLDKVL 1111
Query: 252 PKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPF 311
PK KAT H+VL F MT+++++MED+L F+ +Y+RLDG T DR L+ FN DS +
Sbjct: 1112 PKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDY 1171
Query: 312 FIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQT 371
F FLLS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQK +V +LR T +
Sbjct: 1172 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENS 1231
Query: 372 VEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXX 431
VEE + A KL + + I AG FDN ++AE++ L +L+ K++E
Sbjct: 1232 VEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIE--KEDERRQKGGTD--- 1286
Query: 432 XXXXRSESEIDVFE-SVDKQRREEEMATWRKLI--RGLGTDGEPLPPLPSRLVTDDDLKA 488
E ++D E + R E E+ +RK+ R L T P P SRL T+++L
Sbjct: 1287 ----EEEEDLDDDELNQIIARNENELVVFRKMDEERYLATKNAPYP---SRLYTEEELPE 1339
Query: 489 LYE 491
+Y+
Sbjct: 1340 IYK 1342
Score = 83 (34.3 bits), Expect = 1.0e-88, Sum P(3) = 1.0e-88
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 475 PLPSRLVTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVR 534
P PSRL T+++L +Y+ + P K++ + ++ YGRG R R++
Sbjct: 1326 PYPSRLYTEEELPEIYK-----------IDPEELFKKED-----VASEEYGRGARERKIL 1369
Query: 535 SYEEQWTEEEFEKMCQAESSD 555
Y++ TEE++ K + SD
Sbjct: 1370 QYDDNLTEEQWLKKIEGMVSD 1390
Score = 51 (23.0 bits), Expect = 1.0e-88, Sum P(3) = 1.0e-88
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 685 FVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDP 744
F+P P Q ++ T +GRGR G R RG+ G +L + + D
Sbjct: 1454 FIP--PKRQKSATPGGTTTSGRGRGRGRGRGRGRGRGRGR--GSLLSRYTPSVDPLTADE 1509
Query: 745 KTNEQPQSESL 755
++ Q Q E++
Sbjct: 1510 RSTLQNQIENI 1520
Score = 44 (20.5 bits), Expect = 9.1e-85, Sum P(2) = 9.1e-85
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 542 EEEFEKMCQAESSDSPKLKEE---GLEKSLP 569
E + EK+ + E+ DSP L G E+S P
Sbjct: 1656 EAKLEKIDKGEAIDSPLLNASTTAGTEESTP 1686
Score = 40 (19.1 bits), Expect = 2.4e-84, Sum P(2) = 2.4e-84
Identities = 21/76 (27%), Positives = 32/76 (42%)
Query: 2003 PASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPP 2062
P+ L T EE E + DP+ F KE V A ++ G +++ +D T
Sbjct: 1328 PSRLYTEEELPEIYKIDPEELFK-----KEDV--ASEEYGRGARERKILQY--DDNLTEE 1378
Query: 2063 LSLANEEEMIEGFDND 2078
L E M+ D+D
Sbjct: 1379 QWLKKIEGMVSDDDDD 1394
Score = 39 (18.8 bits), Expect = 1.8e-87, Sum P(3) = 1.8e-87
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 1367 VEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEK-LEDTVDD 1417
V+ S +E++AK K + VA +E + + ++D SV++ + DD
Sbjct: 1402 VDMSDSEMEAKPKKPKGRRGRKPKVARVEDEESQTESDVISVKRQFPEDADD 1453
Score = 38 (18.4 bits), Expect = 2.3e-87, Sum P(3) = 2.3e-87
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 831 KGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
+G+ R G R RG + +P + ++A S Q EN G
Sbjct: 1475 RGRGRGRGRGRGRGRGRGSLLSRYTPSVDPLTADERSTLQNQIENILG 1522
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 894 (319.8 bits), Expect = 1.4e-88, Sum P(2) = 1.4e-88
Identities = 188/412 (45%), Positives = 262/412 (63%)
Query: 17 KIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSS- 75
++ H F VLLTTYEY++ DRP LS+I+W Y+IIDEGHR+KN KL L Y SS
Sbjct: 510 QVRHSNFQVLLTTYEYIIK--DRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSR 567
Query: 76 HRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXX 135
+RL+LTGTP IFNS + F +WFN PF + G D
Sbjct: 568 YRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQ--DKMELTEEE 625
Query: 136 XXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQ-KLLMKRVEENLGSIG 194
+I RLH+VLRPF+LRRLK VE ELP+K+E+++RC+ S Q KL + + + +
Sbjct: 626 SLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVE 685
Query: 195 NSK-GRS----VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIV-RLCGKLEMLD 248
++K G++ + N+VM+L+ ICNHP++ + +D P + ++ R+ GK E+LD
Sbjct: 686 DAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERSID---PTGFNYDMLWRVSGKFELLD 742
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
R+LPKL + HR+L F MT+++++MEDYL ++Q+RYLRLDG T DR L+ FN
Sbjct: 743 RILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPT 802
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
+ +FLLS RAGG+G+NLQ ADTVIIFD+DWNP DLQAQ RAHRIGQ ++V + R T
Sbjct: 803 AEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLIT 862
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEE 420
++VEE + A A++KL + + I AG FDN ++ E+R +L SLL EE
Sbjct: 863 EKSVEENILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEE 914
Score = 38 (18.4 bits), Expect = 1.4e-88, Sum P(2) = 1.4e-88
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 519 LDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSP 557
L + GRG R R Y+E + ++ ES P
Sbjct: 985 LQEEPLGRGARRRTPVVYDEAVRDAQWMAEMDMESEARP 1023
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 900 (321.9 bits), Expect = 1.6e-88, Sum P(3) = 1.6e-88
Identities = 196/459 (42%), Positives = 283/459 (61%)
Query: 18 IVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSH 76
I + F VLLTTYEY++ +RP L+K + ++IIDEGHR+KNA KL+ L+ +Y++ +
Sbjct: 594 IRYGNFQVLLTTYEYVIR--ERPMLAKFHYSHMIIDEGHRMKNAQSKLSQTLRTYYKTKN 651
Query: 77 RLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXX 136
RL+LTGTP IFNS + F WFN PF + G + +
Sbjct: 652 RLILTGTPLQNNLPELWALLNFVLPGIFNSVKSFDDWFNTPFANTG--AQEKIELTEEES 709
Query: 137 XXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EEN---LGS 192
+I RLH+VLRPF+LRRLK VE +LP+K+E++++C S Q +L +++ + N +G+
Sbjct: 710 LLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCNLSGLQYVLYQQMLKHNALFVGA 769
Query: 193 -IGNSKG--RSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP--IVRLCGKLEML 247
+G +K + ++N +M+LR ICNHP++ EEV++++ L I R+ GK E+L
Sbjct: 770 DVGGAKSGIKGLNNKIMQLRKICNHPFVF----EEVESVLNSSRLTNDLIWRVSGKFELL 825
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
DR+LPK K + HRVL F MT+++D+MED+L +K +YLRLDG T +R ++ FN
Sbjct: 826 DRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDMLKVFNAP 885
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
DS +F FLLS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQK +V +LR
Sbjct: 886 DSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLI 945
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKK---EEXXXX 424
T +VEE + A KL + + I AG FDN ++AE++ +L+ LL E
Sbjct: 946 TNDSVEEVILERAHQKLDIDGKVIQAGKFDNKSTAEEQEAFLKRLLEADANGADNEENDS 1005
Query: 425 XXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLI 463
RSE E +F S+D++R+ E++ +LI
Sbjct: 1006 LDDDELNEILARSEEEKVLFASMDEERKSEKVPYKSRLI 1044
Score = 70 (29.7 bits), Expect = 1.6e-88, Sum P(3) = 1.6e-88
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 1813 EKDDISSEHAFGSSLVLQDKASEAEIGDRID-EPQVDGFSPRSMSGVVDE---LVDEAGD 1868
+ DDI+ + G A E ++ D D EP+ DGF+ + +S V+DE L DE
Sbjct: 1162 DNDDINGDSGNGGG----GAAIELDVDDDDDNEPETDGFTSKCLS-VIDEITALTDETDG 1216
Query: 1869 H 1869
H
Sbjct: 1217 H 1217
Score = 51 (23.0 bits), Expect = 1.5e-86, Sum P(3) = 1.5e-86
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 1800 GVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVV 1859
G++ + K + +GE+DD E A + + + + + ID ++G S G
Sbjct: 1122 GLLEEDIKDDEVGEEDDEDFEEA--AQPRKRQRRARTPL-PHIDNDDINGDSGNGGGGAA 1178
Query: 1860 DEL-VDEAGDH 1869
EL VD+ D+
Sbjct: 1179 IELDVDDDDDN 1189
Score = 47 (21.6 bits), Expect = 4.1e-86, Sum P(3) = 4.1e-86
Identities = 11/50 (22%), Positives = 25/50 (50%)
Query: 2067 NEEEMIEGFDNDPTGISMAVMDSKECAAEAADQMCVSEGCVVVTEKLSED 2116
+EE+ ++ D+D + A+ +E A+ + EG ++ E + +D
Sbjct: 1084 SEEQWLKAMDDDNDTVEEAIKRKEERIAKRKRNKAIREG--LLEEDIKDD 1131
Score = 43 (20.2 bits), Expect = 1.6e-88, Sum P(3) = 1.6e-88
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 2 LFVQCVMAVLLYSREKIVHQKFNVLLTTYEYLMNKHD 38
LF + V +LL SR+ + +KF TT K D
Sbjct: 133 LFEKQVAGLLLLSRDYDLPEKFQKEFTTISDQTKKDD 169
Score = 38 (18.4 bits), Expect = 3.6e-85, Sum P(3) = 3.6e-85
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 1463 GPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDVGN 1505
G ++ + DD D+ ET + ++ E + ++ +TD N
Sbjct: 1176 GAAIELDVDDDDDNEPETDGFTSKCLSVIDEITALTDETDGHN 1218
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 919 (328.6 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
Identities = 208/500 (41%), Positives = 298/500 (59%)
Query: 17 KIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSS 75
KI +F+V+LTT+EY++ +R LSK++W ++IIDEGHR+KNA KL+ L HY +
Sbjct: 860 KIRAGEFDVVLTTFEYIIK--ERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHAD 917
Query: 76 HRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXX 135
+RL+LTGTP IFNS + F +WFN PF + G D
Sbjct: 918 YRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQ--DKIELSEEE 975
Query: 136 XXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN----LG 191
+I RLH+VLRPF+LRRLK VE ELP+K+E++V+C+ SA Q+++ +++ + +G
Sbjct: 976 TLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIG 1035
Query: 192 SIGNSK--G-RSVHNSVMELRNICNHPYLSQLHAEEVDTLIP-KHYLPPIVRLCGKLEML 247
N K G R +N +M+L+ ICNHP++ + E D + P + I R+ GK E+L
Sbjct: 1036 DQNNKKMVGLRGFNNQIMQLKKICNHPFVFE---EVEDQINPTRETNDDIWRVAGKFELL 1092
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
DR+LPKLKAT HRVL F MT+++D+MED+L + +YLRLDGHT +R L+ FN
Sbjct: 1093 DRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAP 1152
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
DS + F+LS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQK +V +LR
Sbjct: 1153 DSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLI 1212
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-----RECKKE--- 419
T +VEE + A KL + + I AG FDN +++E++ L SLL R K+E
Sbjct: 1213 TTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESGV 1272
Query: 420 EXXXXXXXXXXXXXXXRSESEIDVFESVDKQR--REEEMATWRKLIRGLGTDGEPLPPLP 477
E R++ E+ V +D+ R +EEE+ +L+ + LP +
Sbjct: 1273 EEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEELGVKSRLL-----EKSELPDIY 1327
Query: 478 SRLVTDDDLKALYEAMKIYD 497
SR + + + E+ +Y+
Sbjct: 1328 SRDIGAELKREESESAAVYN 1347
Score = 62 (26.9 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
Identities = 36/186 (19%), Positives = 73/186 (39%)
Query: 1118 QNKSRDSFGSKTISLRSKQETADV--NDVARVMKEIFSETCS---------SKAKTGDSS 1166
++K + G K+ L K E D+ D+ +K SE+ + K T + +
Sbjct: 1304 RSKKEEELGVKS-RLLEKSELPDIYSRDIGAELKREESESAAVYNGRGARERKTATYNDN 1362
Query: 1167 LNEGKDXXXXXXXXXXXXXEVAKKQSS--DDKTCSVTPTVETPPPGFNSPNENPGELTGT 1224
++E + + A+KQ + +DK+ ++ E ++ N+ P +
Sbjct: 1363 MSEEQWLRQFEVSDDEKNDKQARKQRTKKEDKSEAIDGNGEIKGENIDADNDGP-RINNI 1421
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDD-KSLPMVPNLETAP 1283
+ D L+ K +A +P + + ++E NS P +S P+ + +
Sbjct: 1422 SAEDRADTDLAMNDDDFLSKKRKAGRPRGRPKKVKLEGSENSEPPALESSPVTGDNSPSE 1481
Query: 1284 PGFDIP 1289
DIP
Sbjct: 1482 DFMDIP 1487
Score = 46 (21.3 bits), Expect = 8.3e-87, Sum P(2) = 8.3e-87
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 2352 FLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPL 2411
F +++EKN DK+ + Q KE +++A + +G + EN GP
Sbjct: 1372 FEVSDDEKN---DKQ----ARKQRTKKEDKSEAIDG----NGEIKGENIDADNDGPRINN 1420
Query: 2412 VIAEDKTENEI 2422
+ AED+ + ++
Sbjct: 1421 ISAEDRADTDL 1431
Score = 41 (19.5 bits), Expect = 8.7e-85, Sum P(3) = 8.7e-85
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 675 IAPSSQPTTAFVPVA-PGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGK 724
+ + P+ F+ + P + ++ S +GRGR G R RG+
Sbjct: 1473 VTGDNSPSEDFMDIPKPRTAGKTSVKSARTSTRGRGRGRGRGRGRGRGRGR 1523
Score = 41 (19.5 bits), Expect = 8.7e-85, Sum P(3) = 8.7e-85
Identities = 11/52 (21%), Positives = 22/52 (42%)
Query: 1291 EKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSS 1342
+K ++ N E+KGE ++ P +++ +T +N D S
Sbjct: 1390 KKEDKSEAIDGNGEIKGENIDADNDGPRINNISAEDRA-DTDLAMNDDDFLS 1440
Score = 38 (18.4 bits), Expect = 5.8e-86, Sum P(2) = 5.8e-86
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 2171 ETVQEEEKTELSCEKQPI-GSSVDDESKGPEVEPCVQMDVRGD 2212
+ ++E+K+E I G ++D ++ GP + + + R D
Sbjct: 1387 QRTKKEDKSEAIDGNGEIKGENIDADNDGPRINN-ISAEDRAD 1428
Score = 38 (18.4 bits), Expect = 8.7e-85, Sum P(3) = 8.7e-85
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 558 KLKEEGLEKSLPTVVSSS 575
K+K EG E S P + SS
Sbjct: 1454 KVKLEGSENSEPPALESS 1471
Score = 38 (18.4 bits), Expect = 8.7e-85, Sum P(3) = 8.7e-85
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 1953 PWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDI 1989
P + K++GS +P + +S + +E D MDI
Sbjct: 1452 PKKVKLEGSENSEPPALESSPVTGDNSPSE--DFMDI 1486
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 935 (334.2 bits), Expect = 2.6e-88, Sum P(3) = 2.6e-88
Identities = 224/570 (39%), Positives = 323/570 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 852 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 965
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 966 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1025
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1081
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1082 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1141
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1142 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1201
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXX 423
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L +++E
Sbjct: 1202 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRH 1261
Query: 424 XXXXXXXXXXXXRSESEIDVFESVDKQ--RREEEMATWRKLIRGLGTDGEPLP-----PL 476
+ V +++ + E+E+ + + + E L
Sbjct: 1262 CSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDL 1321
Query: 477 PSRLVTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSY 536
R + K M+ + P + + V+R + + +GRG R R+ Y
Sbjct: 1322 DRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLT--CEEEEEKMFGRGSRHRKEVDY 1379
Query: 537 EEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
+ TE+++ K E +++EE +K
Sbjct: 1380 SDSLTEKQWLKAI--EEGTLEEIEEEVRQK 1407
Score = 50 (22.7 bits), Expect = 2.6e-88, Sum P(3) = 2.6e-88
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 524 YGRGKRAREVRSY-----EEQW-------TEEEFEKMCQAESSDSPKLKEEGLEKSLPTV 571
+GRG R R+ Y E+QW T EE E+ + + S + ++ S PT
Sbjct: 1367 FGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTT 1426
Query: 572 VSSS 575
+ S
Sbjct: 1427 STRS 1430
Score = 44 (20.5 bits), Expect = 2.6e-88, Sum P(3) = 2.6e-88
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E E+ E ++E S ++ K + + D + G G + P V+++
Sbjct: 1574 ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGG----RRRPSRGSRAKP-VVSD 1628
Query: 2416 DKTENEIEED 2425
D +E E EED
Sbjct: 1629 DDSEEEQEED 1638
Score = 44 (20.5 bits), Expect = 2.6e-88, Sum P(3) = 2.6e-88
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQP 750
GS+S S ++ GR + Q + RRR + P SDD +E+
Sbjct: 1585 GSESESRSVKVKIK-LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDD---------DSEEE 1634
Query: 751 QSESLNPSGGE 761
Q E + SG E
Sbjct: 1635 QEEDRSGSGSE 1645
Score = 42 (19.8 bits), Expect = 4.2e-88, Sum P(3) = 4.2e-88
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
IEK ++ ++ E +GEE SE+
Sbjct: 1564 IEKEDDSEGEESEEEEEGEEEGSESES 1590
Score = 42 (19.8 bits), Expect = 4.2e-88, Sum P(3) = 4.2e-88
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
G+ K Q RRR R + P +SD + E Q E+ SG
Sbjct: 1600 GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE-----QEEDRSG 1641
Score = 41 (19.5 bits), Expect = 2.3e-87, Sum P(3) = 2.3e-87
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 1959 DGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEK 2018
D +EK + +++ EG+ E + E Q S ++ D A +TP T +K
Sbjct: 1381 DSLTEKQWL--KAIEEGTLEEIEEEVRQKKSSRKRKR-----DSDAGSSTPTTSTRSRDK 1433
Query: 2019 DPDS 2022
D +S
Sbjct: 1434 DDES 1437
Score = 40 (19.1 bits), Expect = 2.9e-87, Sum P(3) = 2.9e-87
Identities = 30/126 (23%), Positives = 46/126 (36%)
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
K D+ G TP + K + K + K GR P +K P PNL
Sbjct: 1414 KRDSDA-GSSTPTTSTRSRDKDDESKKQKKR--GR-------PPAEKLSPNPPNLTKKMK 1463
Query: 1285 GFDIPIEKHNEQSRNQNNPEV-----KGEETPVSSEAPASTEAFEQ--EKVTNTSSFVNL 1337
+ K+ + S + EV +E P E F++ E++ N + +L
Sbjct: 1464 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 1522
Query: 1338 ADLSSD 1343
DL D
Sbjct: 1523 NDLEKD 1528
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 935 (334.2 bits), Expect = 1.1e-87, Sum P(3) = 1.1e-87
Identities = 223/570 (39%), Positives = 323/570 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 852 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP IF S F QWFN PF G+ II
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK----VDLNEEETILII 965
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---L--GSIGN 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L GS +
Sbjct: 966 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1025
Query: 196 SKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
KG+ ++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1081
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1082 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1141
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1142 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1201
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXX 423
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L +++E
Sbjct: 1202 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRH 1261
Query: 424 XXXXXXXXXXXXRSESEIDVFESVDKQ--RREEEMATWRKLIRGLGTDGEPLP-----PL 476
+ V +++ + E+E+ + + + E L
Sbjct: 1262 CSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDL 1321
Query: 477 PSRLVTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSY 536
R + K M+ + P + + V+R + + +GRG R R+ Y
Sbjct: 1322 DRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLT--CEEEEEKMFGRGSRHRKEVDY 1379
Query: 537 EEQWTEEEF-EKMCQAESSDSPKLKEEGLE 565
+ TE+++ +K+ + D+ GL+
Sbjct: 1380 SDSLTEKQWLKKITGKDIHDTASSVARGLQ 1409
Score = 45 (20.9 bits), Expect = 1.1e-87, Sum P(3) = 1.1e-87
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 1968 SSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDS 2022
+S+++ EG+ E + E Q S ++ D A +TP T +KD +S
Sbjct: 1420 ASKAIEEGTLEEIEEEVRQKKSSRKRKR-----DSDAGSSTPTTSTRSRDKDDES 1469
Score = 44 (20.5 bits), Expect = 1.1e-87, Sum P(3) = 1.1e-87
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E E+ E ++E S ++ K + + D + G G + P V+++
Sbjct: 1606 ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGG----RRRPSRGSRAKP-VVSD 1660
Query: 2416 DKTENEIEED 2425
D +E E EED
Sbjct: 1661 DDSEEEQEED 1670
Score = 44 (20.5 bits), Expect = 3.7e-87, Sum P(3) = 3.7e-87
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQP 750
GS+S S ++ GR + Q + RRR + P SDD +E+
Sbjct: 1617 GSESESRSVKVKIK-LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDD---------DSEEE 1666
Query: 751 QSESLNPSGGE 761
Q E + SG E
Sbjct: 1667 QEEDRSGSGSE 1677
Score = 42 (19.8 bits), Expect = 6.0e-87, Sum P(3) = 6.0e-87
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEA 1316
IEK ++ ++ E +GEE SE+
Sbjct: 1596 IEKEDDSEGEESEEEEEGEEEGSESES 1622
Score = 42 (19.8 bits), Expect = 6.0e-87, Sum P(3) = 6.0e-87
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
G+ K Q RRR R + P +SD + E Q E+ SG
Sbjct: 1632 GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE-----QEEDRSG 1673
Score = 40 (19.1 bits), Expect = 3.7e-87, Sum P(3) = 3.7e-87
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 538 EQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSS 575
E+ T EE E+ + + S + ++ S PT + S
Sbjct: 1425 EEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRS 1462
Score = 40 (19.1 bits), Expect = 3.7e-87, Sum P(3) = 3.7e-87
Identities = 30/126 (23%), Positives = 46/126 (36%)
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
K D+ G TP + K + K + K GR P +K P PNL
Sbjct: 1446 KRDSDA-GSSTPTTSTRSRDKDDESKKQKKR--GR-------PPAEKLSPNPPNLTKKMK 1495
Query: 1285 GFDIPIEKHNEQSRNQNNPEV-----KGEETPVSSEAPASTEAFEQ--EKVTNTSSFVNL 1337
+ K+ + S + EV +E P E F++ E++ N + +L
Sbjct: 1496 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 1554
Query: 1338 ADLSSD 1343
DL D
Sbjct: 1555 NDLEKD 1560
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 929 (332.1 bits), Expect = 1.2e-87, Sum P(3) = 1.2e-87
Identities = 201/456 (44%), Positives = 286/456 (62%)
Query: 16 EKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL-KHYQS 74
E I +FN ++TTYEY++ D+ LSKI+W+Y+I+DEGHR+KN + KL+ L Y S
Sbjct: 1804 EFIAPGQFNAVVTTYEYIIK--DKNALSKIKWNYLIVDEGHRMKNYTSKLSIILGTSYSS 1861
Query: 75 SHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXX 134
+RLLLTGTP IF+ EDF QWFN PF G+
Sbjct: 1862 RYRLLLTGTPLQNSLPELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGEK----IEMNEE 1917
Query: 135 XXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQ-KL--LMK-----RV 186
II RLH+VLRPF+LRRLK +VE +LP+K+E++++C+ SA+Q K+ L+K ++
Sbjct: 1918 EQLLIIQRLHKVLRPFLLRRLKKEVEAQLPDKVEKVLKCDMSAFQAKMYDLIKTKGVSKL 1977
Query: 187 EENLGSIGNSK-GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLE 245
+ G+ GN K + + N+ ++LR ICNHPYL + +E + I + ++R GK +
Sbjct: 1978 ASSGGADGNPKLAKGLKNTYVQLRKICNHPYL--FYDDEYN--IDDN----LIRYAGKFD 2029
Query: 246 MLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFN 305
+LDRLLPKLKA HRVL FS MT+L++++E + +K Y++LRLDG T +RG L++ FN
Sbjct: 2030 LLDRLLPKLKAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLDGSTKSDERGHLLELFN 2089
Query: 306 QQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLR 365
+S +FIF+LS RAGG+G+NLQ ADTVIIFD+DWNPQ+DLQAQ RAHRIGQK+ V VLR
Sbjct: 2090 APNSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVRVLR 2149
Query: 366 FETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR--ECKKEEXXX 423
T +VEE + A A K + + I AG F+N ++ DR++ LE L+ E + E
Sbjct: 2150 LVTAHSVEESILARANFKKELDKKIIQAGQFNNKSNRSDRKKMLEDLMTQDETAEMEKQT 2209
Query: 424 XXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATW 459
RS E +++E++DK+R E + W
Sbjct: 2210 VPTDSQINEMIARSPEEFELYENMDKERMEIDQKKW 2245
Score = 65 (27.9 bits), Expect = 1.2e-87, Sum P(3) = 1.2e-87
Identities = 24/76 (31%), Positives = 33/76 (43%)
Query: 722 RGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPV-PDS 780
R KK V AAS P K E+ + + N GG D + +S P+ P+ P S
Sbjct: 2454 RSKKRAKV--AASK---KPSASSKKQEKEKKANSNGGGGGGGGGDDSSNSNPSTPLTPSS 2508
Query: 781 VSPSAVKGQSGTIDPS 796
S S++ Q PS
Sbjct: 2509 SSSSSITAQPPLPSPS 2524
Score = 65 (27.9 bits), Expect = 5.3e-87, Sum P(3) = 5.3e-87
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 2289 SDVEEEKIEGFSKPVGSEKES--IASAVPLDESKGPDAEVSSQTAIEGGG 2336
+D E+E+ E F +PV S+K + AS P SK + E + + GGG
Sbjct: 2439 ADEEDEEDEDFQRPVRSKKRAKVAASKKPSASSKKQEKEKKANSNGGGGG 2488
Score = 54 (24.1 bits), Expect = 3.7e-86, Sum P(3) = 3.7e-86
Identities = 35/136 (25%), Positives = 56/136 (41%)
Query: 843 TPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKI 902
TP R KR+ L S SD + ++ + E + R +S K A S++ S
Sbjct: 2415 TPSRTNKRKELESN-YSD-EEDDDDDADEEDEEDEDFQRPVRSKKRAKV-AASKKPSASS 2471
Query: 903 QVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSS---QPSGSTPAQVPSM 959
+ Q +++ G + S S P+ P++ SSS QP +P+ V
Sbjct: 2472 KKQEKEKKANSNGGGGGGGGGDDSSNSNPST-PLT-PSSSSSSSITAQPPLPSPSPVKKA 2529
Query: 960 DLGNVASDTKEVLSEN 975
G A K+ +SEN
Sbjct: 2530 GRGRPAGTMKKKISEN 2545
Score = 52 (23.4 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 678 SSQPTTAFVPVAPGSQSASACPS----TPMQPKGRGR 710
+S P+T P + S S +A P +P++ GRGR
Sbjct: 2497 NSNPSTPLTPSSSSSSSITAQPPLPSPSPVKKAGRGR 2533
Score = 49 (22.3 bits), Expect = 1.2e-87, Sum P(3) = 1.2e-87
Identities = 19/77 (24%), Positives = 32/77 (41%)
Query: 859 SDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGP 918
++++ S +NL + NN GG R +LS L+N + P + P
Sbjct: 3071 NNINNNNNSNTNLNNINNGGGKRYDPM-------SLSN-LTNDDEPNPQPTFVTRPQQQP 3122
Query: 919 DQKPAEQSVRVVQSNQP 935
Q+ +Q + Q QP
Sbjct: 3123 QQQQPQQQQQPQQQQQP 3139
Score = 49 (22.3 bits), Expect = 5.9e-86, Sum P(3) = 5.9e-86
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 741 GPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTI 793
G D +N P S L PS S++ +++ P P P V + +GT+
Sbjct: 2491 GGDDSSNSNP-STPLTPSSSSSSS----ITAQPPLPSPSPVKKAGRGRPAGTM 2538
Score = 46 (21.3 bits), Expect = 2.6e-87, Sum P(3) = 2.6e-87
Identities = 22/115 (19%), Positives = 42/115 (36%)
Query: 1190 KQSSDDKTCSVTPTVETPPPGFN--SPNENPGELTGTKNDASVRGDHTPVSGHTLASKTE 1247
K +S D++ S T T+E P SP + P + + + + +
Sbjct: 2692 KSNSADQS-STTSTIEQSQPTITQQSPQQQPQQQPQPQQQQQQQQQQQQQQQQK-PQQQQ 2749
Query: 1248 ALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNN 1302
A++ N + ++ + S N +PP + ++N S N NN
Sbjct: 2750 AIQSPNVDKNNSTTTTTSTKLLNNSKGNHNNNSLSPPASPCNLSQNNNISNNNNN 2804
Score = 43 (20.2 bits), Expect = 5.3e-87, Sum P(3) = 5.3e-87
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 2066 ANEEEMI-EGFDNDPTGISMAVMDS 2089
AN MI E FD+D G S + DS
Sbjct: 2316 ANNNAMISEFFDDDDDGSSSSSSDS 2340
Score = 42 (19.8 bits), Expect = 1.6e-85, Sum P(3) = 1.6e-85
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 734 SDDIPSPGPDPKTNEQPQSESLNP 757
+DD P+P P T Q Q + P
Sbjct: 3104 NDDEPNPQPTFVTRPQQQPQQQQP 3127
Score = 42 (19.8 bits), Expect = 3.2e-85, Sum P(3) = 3.2e-85
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 691 GSQSASACPSTPMQPKGRGRR-IQSGEQVPRRRG-KKIGLVLPAAS 734
G S+++ PSTP+ P I + +P KK G PA +
Sbjct: 2492 GDDSSNSNPSTPLTPSSSSSSSITAQPPLPSPSPVKKAGRGRPAGT 2537
Score = 40 (19.1 bits), Expect = 1.1e-86, Sum P(3) = 1.1e-86
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 2010 EEKTEGSEKDPDSSFAAQEDPKES 2033
++ + S D DS F ++ PK +
Sbjct: 2330 DDGSSSSSSDSDSDFESKPTPKRT 2353
Score = 40 (19.1 bits), Expect = 1.1e-84, Sum P(3) = 1.1e-84
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 842 VTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGG 879
V ++R K A P S E K+N GG
Sbjct: 2453 VRSKKRAKVAASKKPSASSKKQEKEKKANSNGGGGGGG 2490
Score = 40 (19.1 bits), Expect = 7.5e-84, Sum P(3) = 7.5e-84
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1437 GNVPGNTSEDSSKMPLETPLIMKSTEGPSVS 1467
G G +DSS TPL S+ S++
Sbjct: 2485 GGGGGGGGDDSSNSNPSTPLTPSSSSSSSIT 2515
Score = 39 (18.8 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 39/167 (23%), Positives = 66/167 (39%)
Query: 1369 QSGTEI--DAKVKWKN--TPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSLVKEL 1424
QSG+E+ DA V +N T L + + ++ KPE S+ + TV D +VK+
Sbjct: 2627 QSGSEVFEDA-VYLQNLFTELFNK-LFPNNQLPKPEPPLSPTSLAIQQATVKDQ-IVKDQ 2683
Query: 1425 I----HR----SPDHSDM---VIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDV 1473
+ H+ S D S + + P T + + P + P + + +
Sbjct: 2684 LDISEHQDKSNSADQSSTTSTIEQSQPTITQQSPQQQPQQQPQPQQQQQQQQQQQQQQQQ 2743
Query: 1474 ADHSRETPILSGSPINSGTECSTVSVK---TDVGNHPQNVEPTSASP 1517
++ I S + + + +T S K GNH N ASP
Sbjct: 2744 KPQQQQA-IQSPNVDKNNSTTTTTSTKLLNNSKGNHNNNSLSPPASP 2789
Score = 38 (18.4 bits), Expect = 1.8e-86, Sum P(3) = 1.8e-86
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1683 LDKTEIATSCDTASLDDSHDNGNVEVL 1709
LD + + + + +D +DN NV V+
Sbjct: 2386 LDDDDDDNNSNNNNNNDDYDNNNVSVV 2412
Score = 38 (18.4 bits), Expect = 1.8e-86, Sum P(3) = 1.8e-86
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 1294 NEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTS 1332
N + N NN + V + P+ T +E +N S
Sbjct: 2393 NNSNNNNNNDDYDNNNVSVVATTPSRTNK-RKELESNYS 2430
Score = 37 (18.1 bits), Expect = 2.3e-86, Sum P(3) = 2.3e-86
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 1693 DTASLDDSHDNGN 1705
DT LDD D+ N
Sbjct: 2382 DTNGLDDDDDDNN 2394
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 904 (323.3 bits), Expect = 3.2e-87, Sum P(3) = 3.2e-87
Identities = 207/484 (42%), Positives = 289/484 (59%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL-KHYQSSHRLLLT 81
F VLLTTYEY++ DRP LSKI+W ++I+DEGHR+KN KL++ L ++Y S +RL+LT
Sbjct: 636 FQVLLTTYEYIIK--DRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILT 693
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP IF S + F +WFN PF + G D +I
Sbjct: 694 GTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQ--DRMDLTEEEQLLVIR 751
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVE-ENLGSIGNSKG-- 198
RLH+VLRPF+LRRLK VE +LP+K ER+++C SA Q L K++ N + + KG
Sbjct: 752 RLHKVLRPFLLRRLKKDVEKDLPDKQERVIKCRFSALQAKLNKQLATHNKMVVSDGKGGK 811
Query: 199 ---RSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLK 255
R + N +M+LR +CNHP++ + ++V+ + L I R GK E+LDR+LPK K
Sbjct: 812 VGMRGLSNMLMQLRKLCNHPFVFEQVEDQVNPGRGTNDL--IWRTAGKFELLDRILPKFK 869
Query: 256 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 315
AT HRVL F MT+++++MED+L + +YLRLDG T DR L+ FN DS +F FL
Sbjct: 870 ATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAPDSEYFCFL 929
Query: 316 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 375
LS RAGG+G+NLQ ADTVIIFD+DWNP DLQAQ RAHRIGQK +V +LR T +VEE+
Sbjct: 930 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEEK 989
Query: 376 VRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXX- 434
+ A+ KL + + I AG FDN ++ E+R L +LL + +
Sbjct: 990 ILERAQFKLDMDGKVIQAGKFDNKSTNEERDALLRTLLETAEGTDQAGDQDEMDDDDLNN 1049
Query: 435 --XRSESEIDVFESVDKQRREE-EMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYE 491
RS+ E+ VF+ +D++R++ KL R +G + E LP VT+++ A E
Sbjct: 1050 IMARSDEELAVFQRMDRERQKTCPYGPGHKLPRLMG-ESE----LPEIYVTEENPVA-EE 1103
Query: 492 AMKI 495
A +I
Sbjct: 1104 AAEI 1107
Score = 59 (25.8 bits), Expect = 3.2e-87, Sum P(3) = 3.2e-87
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 518 ALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESS---DSPKLKEEGLEK 566
A + + GRG R R++ Y++ TEE++ A+ D+ KE +EK
Sbjct: 1104 AAEIELSGRGARERKITRYDDGLTEEQWLMAVDADDDTIEDAIARKEARVEK 1155
Score = 47 (21.6 bits), Expect = 3.2e-87, Sum P(3) = 3.2e-87
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 717 QVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSG 759
+V +RR K A D+ SP P +T+E PQ + G
Sbjct: 1152 RVEKRRSNKEKRGRKAQGDE-SSPEPSRETSETPQPKKRGRRG 1193
Score = 43 (20.2 bits), Expect = 8.5e-87, Sum P(3) = 8.5e-87
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 701 TPMQPKGRGRRIQSGEQVPRRRGKKIGLVLP 731
TP QPK RGRR G P+R+ +++ P
Sbjct: 1183 TP-QPKKRGRR---GP-APKRKAEELAEETP 1208
Score = 38 (18.4 bits), Expect = 2.8e-86, Sum P(3) = 2.8e-86
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 2012 KTEGSEKDPDSSFAAQEDPK 2031
K +G E P+ S E P+
Sbjct: 1166 KAQGDESSPEPSRETSETPQ 1185
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 901 (322.2 bits), Expect = 3.1e-84, Sum P(3) = 3.1e-84
Identities = 198/471 (42%), Positives = 282/471 (59%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQ 73
+ +I FNVLLTT+EY++ DRP LS+I+W ++IIDEGHRIKN KL + L +Y
Sbjct: 960 QSQIRSSNFNVLLTTFEYIIK--DRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYH 1017
Query: 74 SSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXX 133
S +RL+LTGTP IFNS + F +WFN PF + G D
Sbjct: 1018 SQYRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQ--DKIGLNE 1075
Query: 134 XXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQ-KLLMKRVEENLGS 192
II RLH+VLRPF+ RRLK VE ELP+K+E++++C S Q KL + + +
Sbjct: 1076 EEALLIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLF 1135
Query: 193 IGNSKGRS----VHNSVMELRNICNHPYLSQLHAEEVDTLI-PKHYLPPIV-RLCGKLEM 246
+ KG++ + N+VM+L+ ICNHP++ E+V+ I P ++ R GK E+
Sbjct: 1136 VDGEKGKTGIKGLQNTVMQLKKICNHPFIF----EDVERAIDPSGTNVDLLWRAAGKFEL 1191
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKL T H+ L F MT+++ +MEDYL K ++YLRLDG T DR +L+ +FN
Sbjct: 1192 LDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFND 1251
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
S +IF+LS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQ ++V +LR
Sbjct: 1252 PKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRL 1311
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXX 426
T +++EE + + A++KL + + I AG FDN ++ E+R +L SLL ++
Sbjct: 1312 ITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYG 1371
Query: 427 XXXXXXXX---XRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLP 474
R++ E+ +F+ +DK+R ++ K + L T E LP
Sbjct: 1372 ELQDDELNELISRTDEELVLFKKLDKERAATDIYGKGKPLERLLTVNE-LP 1421
Score = 52 (23.4 bits), Expect = 3.1e-84, Sum P(3) = 3.1e-84
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 1874 HSPVHVVERE--KSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGD 1926
++ +H E E E+ L L ++ E +D + D ++ EDS S +
Sbjct: 1626 NNSLHAYEEEALNEEQASLVFLENSEAELPLDSGIVSAEDDKVITYEDSSSSYSE 1680
Score = 40 (19.1 bits), Expect = 3.1e-84, Sum P(3) = 3.1e-84
Identities = 32/120 (26%), Positives = 53/120 (44%)
Query: 451 RREEEMATWRKLIRG-LGTD--GEPLPPLPSRLVTDDDLKALYEAMKIYDAPKTGVSPNV 507
R +EE+ ++KL + TD G+ PL RL+T ++L Y K V +
Sbjct: 1384 RTDEELVLFKKLDKERAATDIYGKG-KPL-ERLLTVNELPDFY---------KVEVD-SF 1431
Query: 508 GVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKS 567
V+ E L+ Q+ R +R R SY E T +E + S+ P+ + +K+
Sbjct: 1432 AVQSSSE----LEDQYLERKRRRRNSISYTEL-TLDELNTVDDPSSTLMPRKRGRPRKKT 1486
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 840 (300.8 bits), Expect = 3.6e-80, Sum P(4) = 3.6e-80
Identities = 201/561 (35%), Positives = 308/561 (54%)
Query: 18 IVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHR 77
I F V++T++EY++ DR L ++ W YIIIDEGHRIKN + KL+ L+ Y S +R
Sbjct: 718 IPRNAFCVVITSFEYIIK--DRKTLGRVHWIYIIIDEGHRIKNKNSKLSVQLRQYHSRNR 775
Query: 78 LLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXX 137
LLLTGTP IFNS++ F WFN PF++ G N
Sbjct: 776 LLLTGTPLQNDLGELWALLNFLLPTIFNSADTFQNWFNAPFQAKGKN---LINVNEEESL 832
Query: 138 XIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEE--------- 188
IINRLHQVLR F+LRRLK VE++LP+K E++++C SA Q + + + E
Sbjct: 833 IIINRLHQVLRFFLLRRLKSDVESQLPDKKEKVIKCNMSALQIAMYRSLVEYGVLPIDPD 892
Query: 189 -NLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
G G K + +N V +L+ ICNHPYL + +E D I + ++R GK + +
Sbjct: 893 SKEGRSGRLKMKGFNNIVKQLQKICNHPYLFK---DEWD--INED----LIRTSGKFDTM 943
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D++L K+ A+ HRVL F+ MT ++++ME+Y + K++ +LRLDG T +R L+ ++N+
Sbjct: 944 DQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHLVVEWNRP 1003
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
DSPF+IF+LS AGG+G+NLQ ADTVIIFD+DWNPQ+DLQAQ R HRIGQ V V R
Sbjct: 1004 DSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSVSVFRLI 1063
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXX-XX 426
+ ++EE++ A KL + + I AG F+ +++ ++RR LE L
Sbjct: 1064 SANSIEEKILGRATDKLEIDAKIIQAGMFNTHSNDQERRAKLEQFLHGFPNNTLDEVPVD 1123
Query: 427 XXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDL 486
R + E F+ +DK+R + + A +K +P+ P RL+ + +L
Sbjct: 1124 LKEINKLIARDDFEFKQFQEMDKERLKVDQANSKKT-------RQPIKP---RLMIEKEL 1173
Query: 487 KALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFE 546
A P T ++ K++ + + ++ + + R E+ T E+++
Sbjct: 1174 PEWVLA-----TPVTDKDEDIAGKKRSTAIASANSFVHDNLTDNQYARMIEKNMTFEQYK 1228
Query: 547 KMCQAESSDSPKLKEEGLEKS 567
+A+ + K K++G EKS
Sbjct: 1229 AHLEAKKLKNGKSKKDG-EKS 1248
Score = 70 (29.7 bits), Expect = 3.6e-80, Sum P(4) = 3.6e-80
Identities = 32/121 (26%), Positives = 52/121 (42%)
Query: 1400 ENKTDGDSVEKLEDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPL---ETPL 1456
EN +D ++ + + VDDH I S ++++ N GN+++ + ETP
Sbjct: 1340 ENNSDNENQDDIIQ-VDDHPT--NGIENSSNNNNNDDNNSNGNSNQQQQQQQSNNGETPT 1396
Query: 1457 IMKSTEG-PSVS-------MKADDVADHSRETPILSGSPINSGTECSTVSVKTDVGNHPQ 1508
K G P +S K DD+ S ++P S + S TE S D G++
Sbjct: 1397 PAKKGRGRPRLSNNPTPIKRKLDDLKGKSDDSPKPSKKSLMSETETSDNEQSMDSGDNSN 1456
Query: 1509 N 1509
N
Sbjct: 1457 N 1457
Score = 57 (25.1 bits), Expect = 3.6e-80, Sum P(4) = 3.6e-80
Identities = 21/79 (26%), Positives = 30/79 (37%)
Query: 1967 VSSQSVLEG-SKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFA 2025
V+S + G S T + G + I PE + D EK +G+EKD D +
Sbjct: 1496 VASTAATNGTSVHTPGKRGRKKKIRPNPEDEEKDKDKENENENENEKEKGNEKDKDPTST 1555
Query: 2026 AQEDPKESVVEAGDQMGVS 2044
+ AG G S
Sbjct: 1556 TSPTTTTTSTSAGTSSGSS 1574
Score = 51 (23.0 bits), Expect = 1.5e-78, Sum P(3) = 1.5e-78
Identities = 24/126 (19%), Positives = 46/126 (36%)
Query: 1210 GFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPD 1269
G NS N N + N+ + + +++ S+ N A + +P
Sbjct: 1452 GDNSNNNNNNNNSNNNNNNNEKNNNSNGEPSENGSQENVNGNGNVASTAATNGTSVHTPG 1511
Query: 1270 DKSLP--MVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEK 1327
+ + PN E D E NE + + N + ++ P S+ +P +T
Sbjct: 1512 KRGRKKKIRPNPEDEEKDKDKENENENENEKEKGNEK---DKDPTSTTSPTTTTTSTSAG 1568
Query: 1328 VTNTSS 1333
++ SS
Sbjct: 1569 TSSGSS 1574
Score = 50 (22.7 bits), Expect = 8.5e-79, Sum P(2) = 8.5e-79
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 743 DPKTNEQPQSESLNPSGGESTATDGNVSSIPTAP 776
DP + P + + + S G S+ + +V + P +P
Sbjct: 1551 DPTSTTSPTTTTTSTSAGTSSGSSSSVLNTPLSP 1584
Score = 49 (22.3 bits), Expect = 3.5e-79, Sum P(3) = 3.5e-79
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 1086 GEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETAD 1140
GE P K +G P + + KL+ + KS DS SL S+ ET+D
Sbjct: 1392 GETPTPAKKGRGR-PRLSNNPTPIKRKLDD-LKGKSDDSPKPSKKSLMSETETSD 1444
Score = 44 (20.5 bits), Expect = 8.2e-79, Sum P(4) = 8.2e-79
Identities = 22/106 (20%), Positives = 38/106 (35%)
Query: 2317 DESKGPDAEVSSQTAIEGGGVV---------SIPVPEEADGPASFLAAEEEKNECSDKEP 2367
+ S G +E SQ + G G V S+ P + E++ + DKE
Sbjct: 1475 NNSNGEPSENGSQENVNGNGNVASTAATNGTSVHTPGKRGRKKKIRPNPEDEEKDKDKE- 1533
Query: 2368 VGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVI 2413
+ ++ E ++ K +P +TS G S V+
Sbjct: 1534 -NENENENEKEKGNEKDKDPTSTTSPTTTTTSTSAGTSSGSSSSVL 1578
Score = 42 (19.8 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 678 SSQPTTAFVPVAPGSQSASACP--STPMQPK 706
++ PTT + G+ S S+ +TP+ P+
Sbjct: 1555 TTSPTTTTTSTSAGTSSGSSSSVLNTPLSPE 1585
Score = 41 (19.5 bits), Expect = 7.6e-78, Sum P(2) = 7.6e-78
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 525 GRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPA 578
GR K+ R EE+ ++E E + E + ++ + PT ++S A
Sbjct: 1514 GRKKKIRPNPEDEEKDKDKENENENENEKEKGNEKDKDPTSTTSPTTTTTSTSA 1567
Score = 39 (18.8 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 1081 KTPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSR 1122
K PT+ +P +G S S+V + L+ S +R
Sbjct: 1550 KDPTSTTSPTTTTTSTSAGTSSGSSSSVLNTPLSPESPFTTR 1591
Score = 38 (18.4 bits), Expect = 1.6e-77, Sum P(2) = 1.6e-77
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 1084 TTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSK 1128
T+ P +RG+K+ P+ D D K N++ ++ K
Sbjct: 1505 TSVHTPGKRGRKKKIRPNPEDEEKDKD-KENENENENEKEKGNEK 1548
Score = 37 (18.1 bits), Expect = 3.6e-80, Sum P(4) = 3.6e-80
Identities = 16/62 (25%), Positives = 25/62 (40%)
Query: 1252 ENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFD---IPIEKHNEQSRNQNNPEVKGE 1308
++K + G+ N S D+ S + E D I +N + N+NN E
Sbjct: 1247 KSKKKKGKSRGRKNKSDDEDSSDDELDDEGISSDDDDNNINNNNNNNDNNNKNNNNNDDE 1306
Query: 1309 ET 1310
ET
Sbjct: 1307 ET 1308
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 684 (245.8 bits), Expect = 8.7e-68, Sum P(3) = 8.7e-68
Identities = 166/411 (40%), Positives = 232/411 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 145 KFDALITTFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 202
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S +F + F GD + +
Sbjct: 203 GTPLQNTVEELFSLLHFLEPSQFPSESEFLKDF-------GDLKTEEQ----------VQ 245
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 246 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHT 305
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEVDT-------LIPKHY-LPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ T +IP + L +VR GKL ++D
Sbjct: 306 NMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLID 365
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 366 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 425
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 426 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 485
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAED-RREYLESLLRE 415
+ E ++ A KLG+ QS++ G N T + ++ +E LLR+
Sbjct: 486 RNSYEREMFDKASLKLGLDKAVLQSMS-GRDGNITGIQQFSKKEIEDLLRK 535
Score = 42 (19.8 bits), Expect = 8.7e-68, Sum P(3) = 8.7e-68
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R R++ S ++ + TE + E +C+A
Sbjct: 682 YGWG-RWRDILSHGRFKRRMTERDVETICRA 711
Score = 38 (18.4 bits), Expect = 8.7e-68, Sum P(3) = 8.7e-68
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 842 VTPRRRGKRQALGSPPISDVSAGP 865
++P GK + L + + DVS P
Sbjct: 734 ISPAENGKTKELQNHSVFDVSPFP 757
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 740 (265.6 bits), Expect = 2.7e-67, Sum P(2) = 2.7e-67
Identities = 164/401 (40%), Positives = 240/401 (59%)
Query: 18 IVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHR 77
++H F+VLLTTYE ++ D+ L I W +++IDE HRIKN L++ ++ +S +R
Sbjct: 416 LLHSDFDVLLTTYEIVIK--DKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENR 473
Query: 78 LLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXX 137
LL+TGTP IF++SE+F FN S DN
Sbjct: 474 LLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSE--------- 524
Query: 138 XIINRLHQVLRPFVLRRLKHKVENELPEKIERLV-----RCEASAYQKLLMKRVEENLGS 192
II +LH +L+PF+LRRLK +VE LP K E + + + Y +L K ++ L +
Sbjct: 525 -IITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDV-LNA 582
Query: 193 IGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLP 252
+ SK + + N +M+LR CNHPYL EE + H ++ GK+ +LD+LLP
Sbjct: 583 MTGSKNQML-NILMQLRKCCNHPYLFD-GIEEPPYIEGNH----LIETSGKMSLLDKLLP 636
Query: 253 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 312
+LK + RVL FS MTRLLD+++DY +K Y YLR+DG T G +R I++FN+ +S +F
Sbjct: 637 RLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFNEPNSKYF 696
Query: 313 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 372
IFLLS RAGG+G+NL AD VI+FD+D+NPQ+D+QA RAHRIGQK+ V+V RF T +V
Sbjct: 697 IFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSV 756
Query: 373 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL 413
EE++ A KL + + I G + N++ E+ ++ L +L
Sbjct: 757 EEKIVERAAKKLKLDSLIIQKGKLNLNSAKENNKQELHDIL 797
Score = 41 (19.5 bits), Expect = 2.7e-67, Sum P(2) = 2.7e-67
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 865 PESKSNLQSENNSGGLRLSKSVSMGKQ 891
PE +N + NN +K + GKQ
Sbjct: 1152 PEKINNNDTNNNKSTTLKNKKLKKGKQ 1178
Score = 37 (18.1 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 1406 DSVEKLEDTVDDHSLVKELIH 1426
D +EK+ED +++ + +E I+
Sbjct: 976 DELEKIEDKWNNYMINQEKIN 996
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 740 (265.6 bits), Expect = 2.7e-67, Sum P(2) = 2.7e-67
Identities = 164/401 (40%), Positives = 240/401 (59%)
Query: 18 IVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHR 77
++H F+VLLTTYE ++ D+ L I W +++IDE HRIKN L++ ++ +S +R
Sbjct: 416 LLHSDFDVLLTTYEIVIK--DKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENR 473
Query: 78 LLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXX 137
LL+TGTP IF++SE+F FN S DN
Sbjct: 474 LLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSE--------- 524
Query: 138 XIINRLHQVLRPFVLRRLKHKVENELPEKIERLV-----RCEASAYQKLLMKRVEENLGS 192
II +LH +L+PF+LRRLK +VE LP K E + + + Y +L K ++ L +
Sbjct: 525 -IITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDV-LNA 582
Query: 193 IGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLP 252
+ SK + + N +M+LR CNHPYL EE + H ++ GK+ +LD+LLP
Sbjct: 583 MTGSKNQML-NILMQLRKCCNHPYLFD-GIEEPPYIEGNH----LIETSGKMSLLDKLLP 636
Query: 253 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 312
+LK + RVL FS MTRLLD+++DY +K Y YLR+DG T G +R I++FN+ +S +F
Sbjct: 637 RLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFNEPNSKYF 696
Query: 313 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 372
IFLLS RAGG+G+NL AD VI+FD+D+NPQ+D+QA RAHRIGQK+ V+V RF T +V
Sbjct: 697 IFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSV 756
Query: 373 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL 413
EE++ A KL + + I G + N++ E+ ++ L +L
Sbjct: 757 EEKIVERAAKKLKLDSLIIQKGKLNLNSAKENNKQELHDIL 797
Score = 41 (19.5 bits), Expect = 2.7e-67, Sum P(2) = 2.7e-67
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 865 PESKSNLQSENNSGGLRLSKSVSMGKQ 891
PE +N + NN +K + GKQ
Sbjct: 1152 PEKINNNDTNNNKSTTLKNKKLKKGKQ 1178
Score = 37 (18.1 bits), Expect = 7.2e-67, Sum P(2) = 7.2e-67
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 1406 DSVEKLEDTVDDHSLVKELIH 1426
D +EK+ED +++ + +E I+
Sbjct: 976 DELEKIEDKWNNYMINQEKIN 996
>TAIR|locus:2062999 [details] [associations]
symbol:BRM "AT2G46020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010199 "organ boundary specification between
lateral organs and the meristem" evidence=IGI] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
Length = 2193
Score = 696 (250.1 bits), Expect = 3.3e-67, Sum P(3) = 3.3e-67
Identities = 166/375 (44%), Positives = 225/375 (60%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
L+S+E + KFNVL+TTYE++M +DR KLSK+ W YIIIDE R+K+ L DL
Sbjct: 1071 LFSQE-VCAMKFNVLVTTYEFIM--YDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDR 1127
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGD-NSPDXXX 130
Y+ RLLLTGTP +F++ + F WF +PF+ G ++ +
Sbjct: 1128 YRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDW 1187
Query: 131 XXXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLL---MK--- 184
+I+RLHQ+L PF+LRR VE LP K+ ++RC SA Q + +K
Sbjct: 1188 LETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATG 1247
Query: 185 --RVE---ENLGSIGN----SK-GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL 234
RV+ E L + N +K R+++N MELR CNHP L+ + + K +L
Sbjct: 1248 TLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFS----KDFL 1303
Query: 235 PPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSG 294
VR CGKL +LDR+L KL+ T HRVL FSTMT+LLD++E+YL +++ Y R+DG TS
Sbjct: 1304 ---VRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSL 1360
Query: 295 GDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHR 354
DR + I FN D+ FIFLLSIRA G G+NLQ ADTV+I+D D NP+ + QA ARAHR
Sbjct: 1361 EDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHR 1420
Query: 355 IGQKRDVLVLRFETV 369
IGQ R+V V+ E V
Sbjct: 1421 IGQTREVKVIYMEAV 1435
Score = 101 (40.6 bits), Expect = 3.3e-67, Sum P(3) = 3.3e-67
Identities = 28/102 (27%), Positives = 55/102 (53%)
Query: 369 VQTVEEQVRASAE-HKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKK--EEXXXXX 425
+ ++E +R + + +K+ +A++ I AG FD T+ E+RR LE+LL + ++ E
Sbjct: 1467 IGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVP 1526
Query: 426 XXXXXXXXXXRSESEIDVFESVDKQRR-EEEMATWRKLIRGL 466
RSE E+++F+ +D++ EEM ++ + L
Sbjct: 1527 SLHEVNRMIARSEEEVELFDQMDEEFDWTEEMTNHEQVPKWL 1568
Score = 52 (23.4 bits), Expect = 1.0e-66, Sum P(4) = 1.0e-66
Identities = 58/294 (19%), Positives = 106/294 (36%)
Query: 703 MQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGES 762
+QP G G + G R + KKI DDI G +++E+ +S N G+
Sbjct: 1598 VQPGGPGGERKRG----RPKSKKINY--KEIEDDIA--GYSEESSEERNIDSGNEEEGDI 1649
Query: 763 TATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXXXXX 822
D + + A + G++ + + + N A
Sbjct: 1650 RQFDDD--ELTGALGDHQTNKGEFDGENPVCGYDYPPGSGSYKKNPPRDDAGSSGSSPES 1707
Query: 823 XXXXXMQTKGQSRKTQSGGVTPRRRGK--RQALGSPPISDVSAGPESKSNLQSENNSGGL 880
M + S+K S R G ++ L +++A +S +LQ +
Sbjct: 1708 HRSKEMASPVSSQKFGSLSALDTRPGSVSKRLLDDLEEGEIAASGDSHIDLQRSGSWAHD 1767
Query: 881 RLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQS-NQPINLP 939
R Q + ++ S I+++P A D G + PA Q ++V +S +
Sbjct: 1768 RDEGDEEQVLQPTIKRKRS--IRLRPRQTAERVD--GSEM-PAAQPLQVDRSYRSKLRTV 1822
Query: 940 ATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKA 993
SS Q + +++ S+ VAS +K +S S + + N +A
Sbjct: 1823 VDSHSSRQDQSDSSSRLRSVPAKKVASTSKLHVSSPKSGRLNATQLTVEDNAEA 1876
Score = 49 (22.3 bits), Expect = 3.3e-67, Sum P(3) = 3.3e-67
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 2270 GGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKG 2321
G G+ ++ P+D S S E + + + PV S+K SA LD G
Sbjct: 1685 GSGSYKKNPPRD-DAGSSGSSPESHRSKEMASPVSSQKFGSLSA--LDTRPG 1733
Score = 49 (22.3 bits), Expect = 1.1e-65, Sum P(4) = 1.1e-65
Identities = 60/310 (19%), Positives = 113/310 (36%)
Query: 1731 DSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQL 1790
+ N E VP+ R+ + + ++ PS +LSSS I+ K +
Sbjct: 1557 EMTNHEQVPKWLRASTREVNATVADLSKKPSKNMLSSSNLIVQPGGPGGERKRGRPKSKK 1616
Query: 1791 LPGADNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGD-RIDEPQVDG 1849
+ + + + + E+ E++ S G D +GD + ++ + DG
Sbjct: 1617 INYKEIEDD---IAGYSEESSEERNIDSGNEEEGDIRQFDDDELTGALGDHQTNKGEFDG 1673
Query: 1850 FSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKD 1909
+P + G + +G + + P R+ + G S +KE S K
Sbjct: 1674 ENP--VCGY--DYPPGSGSYK--KNPP-----RDDAGSSGSSPESHRSKEMASPVSSQKF 1722
Query: 1910 PDSNLVVLEDSKGSIGDQM-DCCQSGVVVPENLSDF-CQPSSSLAPWEAKIDGSSEKDPV 1967
+L L+ GS+ ++ D + G + S Q S S W D E+ +
Sbjct: 1723 --GSLSALDTRPGSVSKRLLDDLEEGEIAASGDSHIDLQRSGS---WAHDRDEGDEEQVL 1777
Query: 1968 SSQSVLEGS-KETVAEAGDQMDISIMPEKLPEHLD--IPASLATPEEKTEGSEKDPDSSF 2024
+ S + + +++D S MP P +D + L T + + DSS
Sbjct: 1778 QPTIKRKRSIRLRPRQTAERVDGSEMPAAQPLQVDRSYRSKLRTVVDSHSSRQDQSDSSS 1837
Query: 2025 AAQEDPKESV 2034
+ P + V
Sbjct: 1838 RLRSVPAKKV 1847
Score = 48 (22.0 bits), Expect = 4.2e-67, Sum P(3) = 4.2e-67
Identities = 29/121 (23%), Positives = 50/121 (41%)
Query: 843 TPR----RRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRL-SKSVSMGKQDALSQE 897
TPR +GKRQ L + P ++ S+ S+ Q EN+ +++ K +G + + E
Sbjct: 2032 TPRGAGISQGKRQKLVNEPETEPSSPQRSQ---QRENSRIRVQIPQKETKLGGTTSHTDE 2088
Query: 898 LSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPAT---HDSSSQPSGSTPA 954
+ I P G D++ + R S+ P++ P S SG P
Sbjct: 2089 --SPILAHP-GELVICKKKRKDREKSGPKTRTGGSSSPVSPPPAMIGRGLRSPVSGGVPR 2145
Query: 955 Q 955
+
Sbjct: 2146 E 2146
Score = 45 (20.9 bits), Expect = 1.0e-66, Sum P(4) = 1.0e-66
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 1306 KGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSD 1343
+G +PVS P T +Q++ N + N + + D
Sbjct: 2133 RGLRSPVSGGVPRETRLAQQQRWPNQPTHPNNSGAAGD 2170
Score = 44 (20.5 bits), Expect = 6.8e-66, Sum P(4) = 6.8e-66
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 919 DQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSS 978
DQ + +R V + + + H SS + Q+ D + +T + S SSS
Sbjct: 1831 DQSDSSSRLRSVPAKKVASTSKLHVSSPKSGRLNATQLTVEDNAEASRETWDGTSPISSS 1890
Query: 979 KGG 981
G
Sbjct: 1891 NAG 1893
Score = 38 (18.4 bits), Expect = 5.4e-66, Sum P(4) = 5.4e-66
Identities = 13/45 (28%), Positives = 17/45 (37%)
Query: 2017 EKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATP 2061
E +P S +Q+ + Q LGG T S LA P
Sbjct: 2051 ETEPSSPQRSQQRENSRIRVQIPQKETKLGGTTSHTDESPILAHP 2095
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 689 (247.6 bits), Expect = 3.4e-67, Sum P(2) = 3.4e-67
Identities = 161/396 (40%), Positives = 225/396 (56%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
++V +T+YE L+ ++ K W Y++IDE HRIKN KL+ ++ +++++RLLLTG
Sbjct: 1 WDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 58
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +FNS++DF WF+ GD ++ R
Sbjct: 59 TPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTN-NCLGDKK-------------LVER 104
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVEENLGSIGNSK 197
LH VLRPF+LRR+K VE LP K E L + + Y ++LMK ++ L S G
Sbjct: 105 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI-LNSAGKMD 163
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 257
+ N +M+LR CNHPYL AE +L V GK+ +LD+LLPKLK
Sbjct: 164 KMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDMHL---VTNSGKMVVLDKLLPKLKEQ 219
Query: 258 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 317
RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I+ +N+ +S F+F+LS
Sbjct: 220 GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLS 279
Query: 318 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 377
RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V V RF T TVEE++
Sbjct: 280 TRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIV 339
Query: 378 ASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
AE KL + + I G D N + + E L+ +
Sbjct: 340 ERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 375
Score = 42 (19.8 bits), Expect = 3.4e-67, Sum P(2) = 3.4e-67
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P + A +EE+ + + P+ ++E KE
Sbjct: 517 IGYKVPRSPDLPNAAQAQKEEQLKIDEAGPLNDE--ELEEKE 556
Score = 42 (19.8 bits), Expect = 3.4e-67, Sum P(2) = 3.4e-67
Identities = 34/162 (20%), Positives = 62/162 (38%)
Query: 1748 DGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHK 1807
D DI+ G A ++ + ES+ + +D V G D E I
Sbjct: 392 DEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKIAFTEW 451
Query: 1808 SE--NMGEKDDISSEHAFGSSL-VLQDKASEAEIGDRIDEPQVDGFS--PRSMSGVVDEL 1862
E K + +++ F +L V + KA +A + +P V F P + ++++
Sbjct: 452 IEPPKRERKANYAADAYFREALRVSEPKAPKAPRPPK--QPNVQDFQFFPPRLFELLEKE 509
Query: 1863 VDEAGDHMG--VSHSP--VHVVEREKSEELGLPSLSSATKEE 1900
+ +G V SP + + +K E+L + EE
Sbjct: 510 ILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAGPLNDEE 551
Score = 40 (19.1 bits), Expect = 5.5e-67, Sum P(2) = 5.5e-67
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 1306 KGEETPVSSEAPASTEAFEQEKVTNTSSFVN 1336
K E+ + P + E E+++ T F N
Sbjct: 535 KEEQLKIDEAGPLNDEELEEKEKLLTQGFTN 565
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 694 (249.4 bits), Expect = 8.3e-67, P = 8.3e-67
Identities = 163/406 (40%), Positives = 231/406 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 276 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 333
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+S++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 334 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 385
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K VE LP K E L + + Y K+LMK ++
Sbjct: 386 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE + IV GK+ +L
Sbjct: 440 V-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDEH---IVSNSGKMVVL 494
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LL KLK RVL FS MTRLLD++EDY ++ Y Y RLDG T +R I+ FN
Sbjct: 495 DKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVP 554
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRIGQK+ V V R
Sbjct: 555 NSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLI 614
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 615 TDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMI 660
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 696 (250.1 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 152/351 (43%), Positives = 214/351 (60%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
++ L + W YIIIDE HRIKN + L+ ++ + +++RLL+TGTP
Sbjct: 307 EKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLN 366
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
+F+S+E F +WF + +G+N ++ +LH+VLRPF+LRRLK
Sbjct: 367 FLLPEVFSSAETFDEWF----QISGENDQQE----------VVQQLHKVLRPFLLRRLKS 412
Query: 158 KVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI-GNSKGRSVHNSVMELRNICNHP 215
VE LP K E +++ S QK K + +++L + G + + + N M+LR CNHP
Sbjct: 413 DVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQLRKCCNHP 472
Query: 216 YLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVME 275
YL Q AE +L V GK+ +LD+LLPKLK D RVL FS MTRLLD++E
Sbjct: 473 YLFQ-GAEPGPPYTTGDHL---VTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILE 528
Query: 276 DYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVII 335
DYL ++ Y+Y R+DG+T G +R A I+ +N+ S F+FLLS RAGG+G+NL AD VI+
Sbjct: 529 DYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVIL 588
Query: 336 FDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 386
+D+DWNPQVDLQAQ RAHRIGQK++V V RF T +E +V A KL +
Sbjct: 589 YDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLAL 639
Score = 60 (26.2 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 2259 DAEANNIIDAEGGGNMRQTV----PQDLGLPLSSSDVEEEKI---EGFS 2300
+ E ++ A M+ T+ P+++G PL++ +VEE+++ EGFS
Sbjct: 800 EKEVRYLMQAHQKTQMKDTIEVDEPEEVGDPLTAEEVEEKELLLEEGFS 848
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 697 (250.4 bits), Expect = 1.3e-65, Sum P(2) = 1.3e-65
Identities = 162/407 (39%), Positives = 234/407 (57%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE + ++ K W Y++IDE HRIKN KL+ L+ +
Sbjct: 218 FIRDVLMPGEWDVCVTSYEMCIR--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREF 275
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
++++RLL+TGTP +FNSSEDF +WFN GD++
Sbjct: 276 KTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTN-TCLGDDA------- 327
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIER-----LVRCEASAYQKLLMKRVE 187
+I RLH VL+PF+LRRLK +VE L K E L + + Y K+L+K ++
Sbjct: 328 ------LITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDID 381
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
G+ G + + N +M+LR NHPYL AE +L V GK+ +L
Sbjct: 382 VVNGA-GKVEKMRLQNILMQLRKCTNHPYLFD-GAEPGPPYTTDTHL---VYNSGKMAIL 436
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKL+ RVL FS MTR+LD++EDY ++ Y Y RLDG T DR I +FN
Sbjct: 437 DKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMD 496
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S F+F+LS RAGG+G+NL AD VII+D+DWNPQ+DLQA RAHRIGQK+ V V R
Sbjct: 497 NSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLI 556
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
T TVEE++ AE KL + I G +N S + ++ + +++R
Sbjct: 557 TESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIR 603
Score = 55 (24.4 bits), Expect = 1.3e-65, Sum P(2) = 1.3e-65
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 732 AASDDIPSPGPDPKTNEQPQSE 753
+AS + P+P P PK +++ +SE
Sbjct: 993 SASSNTPAPAPQPKASQKRKSE 1014
Score = 41 (19.5 bits), Expect = 3.9e-64, Sum P(2) = 3.9e-64
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 748 EQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSS 797
E+ + + P G S A G+ SS AP P ++ K +S + SS
Sbjct: 974 ERAEKKKKAPKGSVS-AGSGSASSNTPAPAPQP--KASQKRKSEVVATSS 1020
Score = 37 (18.1 bits), Expect = 1.0e-63, Sum P(2) = 1.0e-63
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 945 SSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSK 979
S S +TPA P EV++ +S+SK
Sbjct: 991 SGSASSNTPAPAPQPKASQKRKS--EVVATSSNSK 1023
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 704 (252.9 bits), Expect = 6.0e-65, Sum P(3) = 6.0e-65
Identities = 165/406 (40%), Positives = 231/406 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE L+ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 255 FVRDVLLPGEWDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 312
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
++++RLLLTGTP +FNSSEDF WF+ GD
Sbjct: 313 KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTN-NCLGDQK------- 364
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VLRPF+LRR+K VE LP K E L + + Y ++LMK ++
Sbjct: 365 ------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 418
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE +L V GK+ +L
Sbjct: 419 I-LNSAGKLDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDMHL---VTNSGKMVVL 473
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R A I+ +N+
Sbjct: 474 DKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEP 533
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
S F+F+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V V RF
Sbjct: 534 GSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFI 593
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D N + + E L+ +
Sbjct: 594 TDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMI 639
Score = 49 (22.3 bits), Expect = 6.0e-65, Sum P(3) = 6.0e-65
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P + A +EE+ + + EP+ ++E KE
Sbjct: 781 IGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDE--ELEEKE 820
Score = 43 (20.2 bits), Expect = 1.6e-64, Sum P(3) = 1.6e-64
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 1872 VSHSPVHVVEREKSEELGL-PSLSSATKEEKIDGSLD 1907
+ + + E+EK+E+ P SSA K K+DG+ D
Sbjct: 993 IERENMELEEKEKAEKKKRGPKPSSAQKR-KMDGTPD 1028
Score = 40 (19.1 bits), Expect = 1.6e-64, Sum P(3) = 1.6e-64
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 1285 GFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVN 1336
G+ +P N N + K E+ + P + E E+++ T F N
Sbjct: 782 GYKVP---RNPDLPNAAQAQ-KEEQLKIDEAEPLNDEELEEKEKLLTQGFTN 829
Score = 38 (18.4 bits), Expect = 6.0e-65, Sum P(3) = 6.0e-65
Identities = 12/51 (23%), Positives = 19/51 (37%)
Query: 1748 DGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPE 1798
D DI+ G A ++ + ES+ + +D V G D E
Sbjct: 656 DEDIDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYRE 706
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 696 (250.1 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 169/408 (41%), Positives = 236/408 (57%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE L+ +R K W Y++IDE HRIKN KL+ ++ +
Sbjct: 253 FIRDTLLPGEWDVCVTSYEMLII--ERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 310
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
++++RLLLTGTP +FNSSEDF WF+ GD
Sbjct: 311 KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTN-NCLGDTK------- 362
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENEL-PEKIER----LVRCEASAYQKLLMKRVE 187
++ RLH VLRPF+LRR+K VE L P+K + L + + Y K+LMK ++
Sbjct: 363 ------LVERLHTVLRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYTKILMKDID 416
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE +L +V GK+ +L
Sbjct: 417 I-LNSAGKMDKMRLLNVLMQLRKCCNHPYLFD-GAEPGPPYTTDLHL--VVN-SGKMVVL 471
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I+ FN+
Sbjct: 472 DKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEP 531
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S F+F+LS RAGG+G+NL AD VII+D+DWNPQVDLQA RAHRIGQK+ V V RF
Sbjct: 532 NSSKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFI 591
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESLLR 414
T TVEE++ AE KL + + I G D + + + E L S++R
Sbjct: 592 TDNTVEERIVERAEMKLRLDSIVIQQGRLVDPSMNKLGKDEML-SIIR 638
Score = 47 (21.6 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P S +EE+ + + EP+ ++E KE
Sbjct: 778 IGYKVPRNPDLPNSAEMQKEEQAKIDEAEPLNEE--ELEEKE 817
Score = 43 (20.2 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 1872 VSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLD 1907
+ + + EREK+E+ +S+ ++ K DG+ D
Sbjct: 990 IERENMELEEREKAEKKKRGPRTSSAQKRKQDGTPD 1025
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 695 (249.7 bits), Expect = 1.6e-64, Sum P(2) = 1.6e-64
Identities = 162/406 (39%), Positives = 231/406 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE L+ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 269 FVRDVLLPGEWDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 326
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
++++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 327 KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTN-NCLGDQK------- 378
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VLRPF+LRR+K VE LP K E L + + Y ++LMK ++
Sbjct: 379 ------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 432
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE +L V GK+ +L
Sbjct: 433 I-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDMHL---VTNSGKMVVL 487
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I+ +N+
Sbjct: 488 DKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEP 547
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S F+F+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V V RF
Sbjct: 548 NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFI 607
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D N + + E L+ +
Sbjct: 608 TDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 653
Score = 49 (22.3 bits), Expect = 1.6e-64, Sum P(2) = 1.6e-64
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P + A +EE+ + + EP+ ++E KE
Sbjct: 795 IGYKVPRSPDLPNAAQAQKEEQLKIDEAEPLNDE--ELEEKE 834
Score = 39 (18.8 bits), Expect = 1.8e-63, Sum P(2) = 1.8e-63
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 1306 KGEETPVSSEAPASTEAFEQEKVTNTSSFVN 1336
K E+ + P + E E+++ T F N
Sbjct: 813 KEEQLKIDEAEPLNDEELEEKEKLLTQGFTN 843
Score = 39 (18.8 bits), Expect = 1.8e-63, Sum P(2) = 1.8e-63
Identities = 34/162 (20%), Positives = 61/162 (37%)
Query: 1748 DGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHK 1807
D DI+ G A ++ + ES+ + +D V G D E I
Sbjct: 670 DEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKIAFTEW 729
Query: 1808 SE--NMGEKDDISSEHAFGSSL-VLQDKASEAEIGDRIDEPQVDGFS--PRSMSGVVDEL 1862
E K + + + F +L V + KA +A + +P V F P + ++++
Sbjct: 730 IEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPK--QPNVQDFQFFPPRLFELLEKE 787
Query: 1863 VDEAGDHMG--VSHSP--VHVVEREKSEELGLPSLSSATKEE 1900
+ +G V SP + + +K E+L + EE
Sbjct: 788 ILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAEPLNDEE 829
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 706 (253.6 bits), Expect = 3.1e-64, Sum P(3) = 3.1e-64
Identities = 158/378 (41%), Positives = 221/378 (58%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFNVL+TTYE + DR LS+I W Y++IDE HR+KN SCKL +L+ Y H LLLT
Sbjct: 625 KFNVLITTYEMAIT--DRTHLSRIPWKYLVIDEAHRLKNKSCKLTIELRSYSFDHLLLLT 682
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ + F + ES+ +
Sbjct: 683 GTPLQNNTQELWSLLNFLDPKQFSNLDQFLLEYGDLKESSQ-----------------VE 725
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI---GNS- 196
L +L+P++LRR+K +VE + K E +V E + QK + + E+N + G S
Sbjct: 726 SLQAILKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLRKGGKSN 785
Query: 197 KGRSVHNSVMELRNICNHPYLSQ-LHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKL 254
+G S+ N +MELR CNHPYL++ + E ++ K + +++ GKL ++D+LLPKL
Sbjct: 786 QGPSLLNIMMELRKCCNHPYLTKGVEQSETSSIKDKDQIFQKLIQASGKLVLIDKLLPKL 845
Query: 255 KATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIF 314
K +H+VL FS M +LD+++DYLT++ Y + R+DG G DR A ID+F++ DS F+F
Sbjct: 846 KLGNHKVLIFSQMVSVLDILDDYLTYRGYPHERIDGSIKGNDRQAAIDRFSKPDSDRFVF 905
Query: 315 LLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEE 374
LL RAGG+G+NL AADTVIIFD+DWNPQ DLQAQAR HRIGQ + V V R T T E
Sbjct: 906 LLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYRLVTKNTYER 965
Query: 375 QVRASAEHKLGVANQSIT 392
+ A KLG+ +T
Sbjct: 966 LMFDKASKKLGLDRAVLT 983
Score = 64 (27.6 bits), Expect = 3.1e-64, Sum P(3) = 3.1e-64
Identities = 25/120 (20%), Positives = 46/120 (38%)
Query: 924 EQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVI 983
+Q+ +N N DS + S S+ + PS ++ S K+ ++ + ++
Sbjct: 1253 KQNEEEENNNNNDNDKVNSDSIEKESSSSSSSSPSSNINQDNSIEKKEENDTTVKDEKMV 1312
Query: 984 PILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITEPYTGSTNTEGISNTIHHV 1043
I L K VN + T + + TL +TE N EG ++H+
Sbjct: 1313 DIHELQETKVEPNVNANTNSTTTTTTTTTTTTTL-----LTEFNDNDNNDEGYHEYLNHI 1367
Score = 60 (26.2 bits), Expect = 2.7e-63, Sum P(3) = 2.7e-63
Identities = 14/73 (19%), Positives = 31/73 (42%)
Query: 1286 FDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSS--- 1342
FD+ ++++ E+ N NN K + E+ +S+ + + +S + +
Sbjct: 1248 FDLELKQNEEEENNNNNDNDKVNSDSIEKESSSSSSSSPSSNINQDNSIEKKEENDTTVK 1307
Query: 1343 DDKTCSVTPAMET 1355
D+K + ET
Sbjct: 1308 DEKMVDIHELQET 1320
Score = 54 (24.1 bits), Expect = 3.5e-63, Sum P(3) = 3.5e-63
Identities = 20/113 (17%), Positives = 45/113 (39%)
Query: 1108 VFDAKLNQHSQNKSRDSFGSKTISLRSKQETADVNDVARVMKEIFSETCSSKAKTGDSSL 1167
+FD +L Q+ + ++ ++ + ++ S ++ + + + I + K + D+++
Sbjct: 1247 LFDLELKQNEEEENNNNNDNDKVNSDSIEKESSSSSSSSPSSNINQDNSIEKKEENDTTV 1306
Query: 1168 NEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVTPTVETPPPGFNSPNENPGE 1220
+ K V +S T + T T T FN N+N E
Sbjct: 1307 KDEKMVDIHELQETKVEPNVNANTNSTTTTTTTTTTTTTLLTEFND-NDNNDE 1358
Score = 49 (22.3 bits), Expect = 3.1e-64, Sum P(3) = 3.1e-64
Identities = 20/94 (21%), Positives = 40/94 (42%)
Query: 1293 HNEQSRNQNNPEVKGEETPVSSEAPAST-EAFEQEKVTNTSSFVNLADLSSDDKTCSVTP 1351
+N+ + NN G+ T + P+S ++ + V N +N + +K S+
Sbjct: 1961 NNDNNAKNNNTFTYGKSTKSKNRPPSSPMKSNRNQNVNNNHKNINNTNGIVVEKKASLIN 2020
Query: 1352 AMETAPGFDIPIEKGVEQSGTEIDA-KVKWKNTP 1384
+ + F +G ++ T D K K K++P
Sbjct: 2021 ILHSEEEFSD--NEGFKRIDTTDDRLKKKQKSSP 2052
Score = 45 (20.9 bits), Expect = 4.7e-63, Sum P(2) = 4.7e-63
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEG-MGGPSPPLVIA 2414
EEE N +D + V S IE + + + P ++ ++E E +V
Sbjct: 1257 EEENNNNNDNDKVNSD--SIEKESSSSSSSSPSSNINQDNSIEKKEENDTTVKDEKMVDI 1314
Query: 2415 EDKTENEIEEDPVVNS 2430
+ E ++E P VN+
Sbjct: 1315 HELQETKVE--PNVNA 1328
Score = 44 (20.5 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSS-VSQIESKEPEAKA--FEPM-DVVDGAVALEN 2399
+++ G L ++EK DK+P GS +S ++ K ++ F+ + +VV LE
Sbjct: 1685 QQSTGDDDDLLEDDEKGGNIDKKPSGSDELSLVQCKRVLSRIQFFQKLRNVVLKIKDLEE 1744
Query: 2400 TSEGMGGPSP 2409
+ + PSP
Sbjct: 1745 VFKNL--PSP 1752
Score = 43 (20.2 bits), Expect = 1.3e-63, Sum P(3) = 1.3e-63
Identities = 11/66 (16%), Positives = 28/66 (42%)
Query: 1293 HNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTS-SFVNLADLSSDDKTCSVTP 1351
+N + N NN ++ + F + N S S +N+ +++S + +++
Sbjct: 2129 NNNNNNNNNNNNNNNNNNNNNNNNSNNNSLFTKNNNNNNSNSVLNIKNINSSNNGNNIST 2188
Query: 1352 AMETAP 1357
+ +P
Sbjct: 2189 EFDFSP 2194
Score = 41 (19.5 bits), Expect = 7.9e-62, Sum P(3) = 7.9e-62
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 1116 HSQNKSRDSFGSKTISLRSKQETADVNDVARVMKE-IFSETCSSKAKTGDSSLNE 1169
HS + + + ++E + ND +V + I E+ SS + + S++N+
Sbjct: 1238 HSYHLEKKRLFDLELKQNEEEENNNNNDNDKVNSDSIEKESSSSSSSSPSSNINQ 1292
Score = 39 (18.8 bits), Expect = 7.2e-60, Sum P(4) = 7.2e-60
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 1400 ENKTDGDSVEKLEDTVDDHSL 1420
E K + D+ K E VD H L
Sbjct: 1297 EKKEENDTTVKDEKMVDIHEL 1317
Score = 39 (18.8 bits), Expect = 7.2e-60, Sum P(4) = 7.2e-60
Identities = 14/62 (22%), Positives = 25/62 (40%)
Query: 1287 DIPIEKHNEQSRNQNNPEVKG----EETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSS 1342
D IEK E + ++ +ET V A+T + T T++ L + +
Sbjct: 1293 DNSIEKKEENDTTVKDEKMVDIHELQETKVEPNVNANTNSTTTTTTTTTTTTTLLTEFND 1352
Query: 1343 DD 1344
+D
Sbjct: 1353 ND 1354
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 694 (249.4 bits), Expect = 6.5e-64, Sum P(2) = 6.5e-64
Identities = 163/406 (40%), Positives = 231/406 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 276 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 333
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+S++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 334 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 385
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K VE LP K E L + + Y K+LMK ++
Sbjct: 386 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE + IV GK+ +L
Sbjct: 440 V-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDEH---IVSNSGKMVVL 494
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LL KLK RVL FS MTRLLD++EDY ++ Y Y RLDG T +R I+ FN
Sbjct: 495 DKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVP 554
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRIGQK+ V V R
Sbjct: 555 NSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLI 614
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 615 TDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMI 660
Score = 45 (20.9 bits), Expect = 6.5e-64, Sum P(2) = 6.5e-64
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P +A EE+ + EP+ + + E KE
Sbjct: 802 IGYKVPRNPDIPNPAVAQREEQKKIDGAEPL--TPEETEEKE 841
Score = 37 (18.1 bits), Expect = 4.5e-63, Sum P(2) = 4.5e-63
Identities = 6/28 (21%), Positives = 18/28 (64%)
Query: 1884 KSEELGLPSLSSATKEEKIDGSLDKDPD 1911
++ ++ P+++ +++KIDG+ P+
Sbjct: 808 RNPDIPNPAVAQREEQKKIDGAEPLTPE 835
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 695 (249.7 bits), Expect = 8.6e-64, Sum P(2) = 8.6e-64
Identities = 162/406 (39%), Positives = 231/406 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE L+ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 269 FVRDVLLPGEWDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 326
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
++++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 327 KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTN-NCLGDQK------- 378
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VLRPF+LRR+K VE LP K E L + + Y ++LMK ++
Sbjct: 379 ------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 432
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE +L V GK+ +L
Sbjct: 433 I-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDMHL---VTNSGKMVVL 487
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I+ +N+
Sbjct: 488 DKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEP 547
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S F+F+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V V RF
Sbjct: 548 NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFI 607
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D N + + E L+ +
Sbjct: 608 TDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 653
Score = 42 (19.8 bits), Expect = 8.6e-64, Sum P(2) = 8.6e-64
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P + A +EE+ + + P+ ++E KE
Sbjct: 795 IGYKVPRSPDLPNAAQAQKEEQLKIDEAGPLNDE--ELEEKE 834
Score = 40 (19.1 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 1306 KGEETPVSSEAPASTEAFEQEKVTNTSSFVN 1336
K E+ + P + E E+++ T F N
Sbjct: 813 KEEQLKIDEAGPLNDEELEEKEKLLTQGFTN 843
Score = 39 (18.8 bits), Expect = 1.8e-63, Sum P(2) = 1.8e-63
Identities = 34/162 (20%), Positives = 61/162 (37%)
Query: 1748 DGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHK 1807
D DI+ G A ++ + ES+ + +D V G D E I
Sbjct: 670 DEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKIAFTEW 729
Query: 1808 SE--NMGEKDDISSEHAFGSSL-VLQDKASEAEIGDRIDEPQVDGFS--PRSMSGVVDEL 1862
E K + + + F +L V + KA +A + +P V F P + ++++
Sbjct: 730 IEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPK--QPNVQDFQFFPPRLFELLEKE 787
Query: 1863 VDEAGDHMG--VSHSP--VHVVEREKSEELGLPSLSSATKEE 1900
+ +G V SP + + +K E+L + EE
Sbjct: 788 ILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAGPLNDEE 829
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 696 (250.1 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 162/406 (39%), Positives = 231/406 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE L+ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 270 FVRDVLLPGEWDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 327
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
++++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 328 KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTN-NCLGDQK------- 379
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VLRPF+LRR+K VE LP K E L + + Y ++LMK ++
Sbjct: 380 ------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 433
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE +L V GK+ +L
Sbjct: 434 I-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDMHL---VTNSGKMVVL 488
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I+ +N+
Sbjct: 489 DKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEP 548
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S F+F+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V V RF
Sbjct: 549 NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFI 608
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D N + + E L+ +
Sbjct: 609 TDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 654
Score = 49 (22.3 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P + A +EE+ + + EP+ ++E KE
Sbjct: 796 IGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDE--ELEEKE 835
Score = 40 (19.1 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 1285 GFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVN 1336
G+ +P N N + K E+ + P + E E+++ T F N
Sbjct: 797 GYKVP---RNPDLPNAAQAQ-KEEQLKIDEAEPLNDEELEEKEKLLTQGFTN 844
Score = 37 (18.1 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 12/51 (23%), Positives = 19/51 (37%)
Query: 1748 DGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPE 1798
D DI+ G A ++ + ES+ + +D V G D E
Sbjct: 671 DEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYRE 721
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 696 (250.1 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 162/406 (39%), Positives = 231/406 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE L+ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 270 FVRDVLLPGEWDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 327
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
++++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 328 KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTN-NCLGDQK------- 379
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VLRPF+LRR+K VE LP K E L + + Y ++LMK ++
Sbjct: 380 ------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 433
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE +L V GK+ +L
Sbjct: 434 I-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDMHL---VTNSGKMVVL 488
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I+ +N+
Sbjct: 489 DKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEP 548
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S F+F+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V V RF
Sbjct: 549 NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFI 608
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D N + + E L+ +
Sbjct: 609 TDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 654
Score = 49 (22.3 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P + A +EE+ + + EP+ ++E KE
Sbjct: 796 IGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDE--ELEEKE 835
Score = 40 (19.1 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 1285 GFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVN 1336
G+ +P N N + K E+ + P + E E+++ T F N
Sbjct: 797 GYKVP---RNPDLPNAAQAQ-KEEQLKIDEAEPLNDEELEEKEKLLTQGFTN 844
Score = 37 (18.1 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 12/51 (23%), Positives = 19/51 (37%)
Query: 1748 DGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPE 1798
D DI+ G A ++ + ES+ + +D V G D E
Sbjct: 671 DEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYRE 721
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 696 (250.1 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 162/406 (39%), Positives = 231/406 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE L+ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 270 FVRDVLLPGEWDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 327
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
++++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 328 KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTN-NCLGDQK------- 379
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VLRPF+LRR+K VE LP K E L + + Y ++LMK ++
Sbjct: 380 ------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 433
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE +L V GK+ +L
Sbjct: 434 I-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDMHL---VTNSGKMVVL 488
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I+ +N+
Sbjct: 489 DKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEP 548
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S F+F+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V V RF
Sbjct: 549 NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFI 608
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D N + + E L+ +
Sbjct: 609 TDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 654
Score = 49 (22.3 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P + A +EE+ + + EP+ ++E KE
Sbjct: 796 IGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDE--ELEEKE 835
Score = 40 (19.1 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 1285 GFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVN 1336
G+ +P N N + K E+ + P + E E+++ T F N
Sbjct: 797 GYKVP---RNPDLPNAAQAQ-KEEQLKIDEAEPLNDEELEEKEKLLTQGFTN 844
Score = 37 (18.1 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 12/51 (23%), Positives = 19/51 (37%)
Query: 1748 DGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPE 1798
D DI+ G A ++ + ES+ + +D V G D E
Sbjct: 671 DEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYRE 721
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 689 (247.6 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 161/407 (39%), Positives = 237/407 (58%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
+ +++ +KF+V +TTYE + ++ K W YIIIDE HRIKN + L+ ++ + S
Sbjct: 368 KNQLIFKKFDVCITTYEVAIR--EKSTFKKFSWRYIIIDEAHRIKNENSVLSKGVRMFNS 425
Query: 75 SHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXX 134
RLL+TGTP +F+SS+DF +WF+ +N +N +
Sbjct: 426 QFRLLITGTPLQNNLHELWSLLNFLLPDVFSSSDDFDKWFD--LANNTENQQE------- 476
Query: 135 XXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVEEN 189
+I++LH+VLRPF+LRR+K +VE LP K E L + Y++LL K ++
Sbjct: 477 ----VIDKLHKVLRPFLLRRIKTEVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSKDLDAV 532
Query: 190 L-GSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLD 248
+ G+ GN+ + N M+LR CNHPYL AEE +H ++ GK+ +LD
Sbjct: 533 VVGAKGNTGRVRLLNICMQLRKACNHPYLFD-GAEEEPYTTGEH----LIDNSGKMALLD 587
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LL KLK RVL FS M+R+LD++EDY+ ++ Y+Y R+DG T R I+ +N+
Sbjct: 588 KLLKKLKERGSRVLIFSQMSRMLDILEDYMLYRGYKYARIDGSTESIVRENSIENYNKPG 647
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F FLL+ RAGG+G+ L AD VI+FD+DWNPQ+DLQAQ RAHRIGQ + V V RF T
Sbjct: 648 SDLFAFLLTTRAGGLGITLNTADIVILFDSDWNPQMDLQAQDRAHRIGQTKPVTVYRFVT 707
Query: 369 VQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESLLR 414
++EE++ AE KL + I G + N +A+ E L ++LR
Sbjct: 708 ENSMEEKMVEKAEMKLQLDALVIQQGRLVEANKNAKP--EELLAMLR 752
Score = 55 (24.4 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 26/91 (28%), Positives = 41/91 (45%)
Query: 1238 SGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQS 1297
SG T ASK + P NK G+ ++ S P K P + ++ P P K + +
Sbjct: 1122 SGVT-ASKAKTESP-NKT-LGKRKDAPPSKPPAK--PSKASAKSKPA----PKSKTSTTT 1172
Query: 1298 RNQNNPEVKGEETPVSSEAPASTEAFEQEKV 1328
+ +G++ PV E P E E+E+V
Sbjct: 1173 K-PTTTNGRGKKKPVEEEEPMEEEEEEEEEV 1202
Score = 52 (23.4 bits), Expect = 2.3e-63, Sum P(2) = 2.3e-63
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 677 PSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVP 719
P ++P+ A P +S ++ + P GRG++ E+ P
Sbjct: 1149 PPAKPSKASAKSKPAPKSKTSTTTKPTTTNGRGKKKPVEEEEP 1191
Score = 45 (20.9 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 25/93 (26%), Positives = 36/93 (38%)
Query: 2350 ASFLAAEEEKNECSDKEPVGSSVSQIESKEPE--AKAF---EPMDVVDGAVALENTSEGM 2404
AS + A + K E +K +G SK P +KA +P + + T+
Sbjct: 1121 ASGVTASKAKTESPNKT-LGKRKDAPPSKPPAKPSKASAKSKPAPKSKTSTTTKPTTTNG 1179
Query: 2405 GGPSPPLVIAEDKTENEIEEDPVVNSVAVEESK 2437
G P+ E E E EE+ V EE K
Sbjct: 1180 RGKKKPVEEEEPMEEEEEEEEEVEEEEEEEEVK 1212
Score = 42 (19.8 bits), Expect = 2.6e-62, Sum P(2) = 2.6e-62
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 525 GRGKR--AREVRSYEEQWTEEEFEKMCQAESSDSPKL 559
GRGK+ E EE+ EEE E++ + E + K+
Sbjct: 1179 GRGKKKPVEEEEPMEEE--EEEEEEVEEEEEEEEVKV 1213
Score = 42 (19.8 bits), Expect = 6.3e-61, Sum P(3) = 6.3e-61
Identities = 20/80 (25%), Positives = 30/80 (37%)
Query: 1241 TLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDI--PIEKHNE-QS 1297
TL + +A P +K A + A S P KS T G P+E+ +
Sbjct: 1137 TLGKRKDA--PPSKPPAKPSKASAKSKPAPKSKTSTTTKPTTTNGRGKKKPVEEEEPMEE 1194
Query: 1298 RNQNNPEVKGEETPVSSEAP 1317
+ EV+ EE + P
Sbjct: 1195 EEEEEEEVEEEEEEEEVKVP 1214
Score = 37 (18.1 bits), Expect = 6.3e-61, Sum P(3) = 6.3e-61
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 1075 VKRHGRKTPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKS 1121
+K H + EA +R+ +K+ + S V +K S NK+
Sbjct: 1094 IKEHQEEVEAAKEAEKRKKEKEKLKLA---ASGVTASKAKTESPNKT 1137
Score = 37 (18.1 bits), Expect = 2.1e-60, Sum P(3) = 2.1e-60
Identities = 11/49 (22%), Positives = 16/49 (32%)
Query: 2285 PLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIE 2333
P S + K SKP K S + +G V + +E
Sbjct: 1145 PPSKPPAKPSKASAKSKPAPKSKTSTTTKPTTTNGRGKKKPVEEEEPME 1193
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 684 (245.8 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 156/412 (37%), Positives = 234/412 (56%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
++++ KF+VL+T++E ++ ++ L K +W YI++DE HRIKN L+ ++ + S
Sbjct: 231 KDQLYTAKFDVLITSFEMILR--EKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYS 288
Query: 75 SHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXX 134
+RLL+TGTP +F S+ F + F+ N + +
Sbjct: 289 RNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDN---QNSEELDEEEKQRRQ 345
Query: 135 XXXXIINRLHQVLRPFVLRRLKHKVENELPEKIER-----LVRCEASAYQKLLMKRVEEN 189
++ LHQ+L PF+LRR+K VE L KIE + + Y++LL K ++
Sbjct: 346 DKA--VSELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAV 403
Query: 190 LGSIGNSKGRS-VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLD 248
G +G +G++ + N VM+LR CNHPYL AE +L V GK+ +LD
Sbjct: 404 NGVVGKREGKTRLLNIVMQLRKCCNHPYLFD-GAEPGPPYTTDEHL---VYNSGKMIILD 459
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
++L K KA RVL FS M+R+LD++EDY F+ Y Y R+DG TS DR ID++N D
Sbjct: 460 KMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPD 519
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S FIFLL+ RAGG+G+NL +AD VI++D+DWNPQ DLQA RAHRIGQK+ V V RF T
Sbjct: 520 SEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVT 579
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGF-FDNNTSAEDRREYLESLLRECKKE 419
+ +EE+V A KL + I G ++N + + ++ L +++ KE
Sbjct: 580 EKAIEEKVLERAAQKLRLDQLVIQQGRQMNSNNNVGNSKDDLIGMIQHGAKE 631
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 684 (245.8 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 156/412 (37%), Positives = 234/412 (56%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
++++ KF+VL+T++E ++ ++ L K +W YI++DE HRIKN L+ ++ + S
Sbjct: 231 KDQLYTAKFDVLITSFEMILR--EKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYS 288
Query: 75 SHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXX 134
+RLL+TGTP +F S+ F + F+ N + +
Sbjct: 289 RNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDN---QNSEELDEEEKQRRQ 345
Query: 135 XXXXIINRLHQVLRPFVLRRLKHKVENELPEKIER-----LVRCEASAYQKLLMKRVEEN 189
++ LHQ+L PF+LRR+K VE L KIE + + Y++LL K ++
Sbjct: 346 DKA--VSELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAV 403
Query: 190 LGSIGNSKGRS-VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLD 248
G +G +G++ + N VM+LR CNHPYL AE +L V GK+ +LD
Sbjct: 404 NGVVGKREGKTRLLNIVMQLRKCCNHPYLFD-GAEPGPPYTTDEHL---VYNSGKMIILD 459
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
++L K KA RVL FS M+R+LD++EDY F+ Y Y R+DG TS DR ID++N D
Sbjct: 460 KMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPD 519
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S FIFLL+ RAGG+G+NL +AD VI++D+DWNPQ DLQA RAHRIGQK+ V V RF T
Sbjct: 520 SEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVT 579
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGF-FDNNTSAEDRREYLESLLRECKKE 419
+ +EE+V A KL + I G ++N + + ++ L +++ KE
Sbjct: 580 EKAIEEKVLERAAQKLRLDQLVIQQGRQMNSNNNVGNSKDDLIGMIQHGAKE 631
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 658 (236.7 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 157/407 (38%), Positives = 228/407 (56%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
RE KFNV+LT+YE++ D L I W +++DE HR+++ K L Y+
Sbjct: 373 RENQTQYKFNVMLTSYEFI--SVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRI 430
Query: 75 SHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXX 134
++LLLTGTP FN + F F D S +
Sbjct: 431 GYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFT-------DVSKEEQ----- 478
Query: 135 XXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI 193
+ RLH++L P +LRRLK V +P K E +VR E S+ QK K + +N ++
Sbjct: 479 -----VKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKAL 533
Query: 194 GNSKGR----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPK--HYLPPIVRLCGKLEML 247
N KG S+ N +M+LR CNHPYL AEE T+ P + + + + GKL++L
Sbjct: 534 -NQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEA-TISPSGLYEMSSLTKASGKLDLL 591
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
++L +LKA +HRVL FS MT++L+V+E +L + Y+Y R+DG G R ID+FN
Sbjct: 592 SKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDP 651
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
S F+FLLS RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHR+GQK+ V++ RF
Sbjct: 652 VSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFV 711
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
T +VEE++ A+HK+ + + + G T+ ++ LE +LR
Sbjct: 712 THNSVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFS--KDELEDILR 756
Score = 39 (18.8 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 510 KRKGEHLGALDTQHY-GRGKRAREVRSYEEQW 540
++K +D + G+GKR R+ Y Q+
Sbjct: 847 QKKQSQQSQVDVESIMGKGKRIRKEIDYSNQY 878
Score = 39 (18.8 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 1814 KDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVS 1873
KD++ FG+ + +D SEA D+ V R+ G+ +E A +++ S
Sbjct: 748 KDELEDILRFGTEDLFKDGKSEAI---HYDDKAVADLLDRTNRGI-EEKESWANEYLS-S 802
Query: 1874 HSPVHVVEREKSEE 1887
+E EE
Sbjct: 803 FKVASYATKEDHEE 816
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 695 (249.7 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 162/406 (39%), Positives = 231/406 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE L+ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 270 FVRDVLLPGEWDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 327
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
++++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 328 KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTN-NCLGDQK------- 379
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VLRPF+LRR+K VE LP K E L + + Y ++LMK ++
Sbjct: 380 ------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 433
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE +L V GK+ +L
Sbjct: 434 I-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDMHL---VTNSGKMVVL 488
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I+ +N+
Sbjct: 489 DKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEP 548
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S F+F+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V V RF
Sbjct: 549 NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFI 608
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D N + + E L+ +
Sbjct: 609 TDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 654
Score = 40 (19.1 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 34/162 (20%), Positives = 62/162 (38%)
Query: 1748 DGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHK 1807
D DI+ G A ++ + ES+ + +D V G D E I
Sbjct: 671 DEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKIAFTEW 730
Query: 1808 SE--NMGEKDDISSEHAFGSSL-VLQDKASEAEIGDRIDEPQVDGFS--PRSMSGVVDEL 1862
E K + + + F +L V + KA +A + +P V F P + ++++
Sbjct: 731 IEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPK--QPNVQDFQFFPPRLFELLEKE 788
Query: 1863 VDEAGDHMG--VSHSPV--HVVEREKSEELGLPSLSSATKEE 1900
+ +G V +P + + +K E+L + S EE
Sbjct: 789 ILFYRKTIGYKVPRNPELPNAAQAQKEEQLKIDEAESLNDEE 830
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 663 (238.4 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 161/416 (38%), Positives = 228/416 (54%)
Query: 17 KIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSH 76
K V KF +++T+YE MN R L W Y++IDEGHR+KN CKL +LKH + +
Sbjct: 298 KTVGPKFPIVITSYEVAMNDAKRI-LRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDN 356
Query: 77 RLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXX 136
+LLLTGTP IF S ++F WF+ F N
Sbjct: 357 KLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFD--FSEKNKNEA-TKEEEEKRR 413
Query: 137 XXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQK-----LLMKRVEENLG 191
++++LH +LRPF+LRR+K VE LP K E ++ + +QK L+ +E +LG
Sbjct: 414 AQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLG 473
Query: 192 --SI-GNS-KGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP---IVRLCGKL 244
+I G KG+ ++N V++LR CNHP L Q ++D + PP IV CGK
Sbjct: 474 ENAIRGQGWKGK-LNNLVIQLRKNCNHPDLLQ---GQIDG---SYLYPPVEEIVGQCGKF 526
Query: 245 EMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKF 304
+L+RLL +L A +H+VL FS T+LLD+M+ Y + K + R+DG +R I F
Sbjct: 527 RLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDF 586
Query: 305 NQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVL 364
+ + S IFLLS RAGG+G+NL AADT I++D+DWNPQ+DLQA R HRIGQ + V V
Sbjct: 587 SDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVY 646
Query: 365 RFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEE 420
R T Q++E +V A KL + + I G F + E +L K++E
Sbjct: 647 RLSTAQSIETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEEDILALLKEDE 702
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 491 (177.9 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 110/294 (37%), Positives = 166/294 (56%)
Query: 16 EKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSS 75
+K++ Q F++ +TT++ ++ ++ L KI W+YI++DEGHR+KN + + L ++S
Sbjct: 977 KKLLEQTFDICITTFDLVIK--EKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSK 1034
Query: 76 HRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXX 135
+R+LLTGTP IF+S DF +WF K + D
Sbjct: 1035 YRILLTGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDV---YEHITEEE 1091
Query: 136 XXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVE----ENLG 191
IINRLH VL PF+LRR+K V LP+K E + E S YQK+L K+++ + +
Sbjct: 1092 QLLIINRLHSVLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFKQVN 1151
Query: 192 SIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLL 251
G+ + N VM+LR I NHPYL L+ +D I++ GK E+LDR+L
Sbjct: 1152 HNGSITTKIFQNIVMQLRKIVNHPYLF-LYDYNIDE--------NIIKCSGKFEVLDRML 1202
Query: 252 PKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFN 305
PKL H+VL FS MT+L++++ DYL F+ Y+Y RLDG+ +R +ID+FN
Sbjct: 1203 PKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFN 1256
Score = 274 (101.5 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 61/145 (42%), Positives = 87/145 (60%)
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
QD+ IF+LS R+G +G+NLQ ADTVIIFD+D+NP D+QA R HRIGQK V V RF
Sbjct: 1401 QDA--MIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQKNVVKVFRF 1458
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXX 426
T+ VEE V A+HKL + ++ I AG F+ + EDR+ L+ +++ +K +
Sbjct: 1459 ITLSGVEELVFKKAQHKLSINDKVIQAGLFNKIYNDEDRQNKLKDIIQRNQKNDMTTHPT 1518
Query: 427 X-XXXXXXXXRSESEIDVFESVDKQ 450
R+E E++ F DK+
Sbjct: 1519 NPLLLNYYMKRNEEELEYFLDFDKR 1543
Score = 52 (23.4 bits), Expect = 3.9e-40, Sum P(3) = 3.9e-40
Identities = 18/87 (20%), Positives = 35/87 (40%)
Query: 389 QSITAGFFD--NNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXRSESEI---DV 443
+++ +G F + E+ YL S++++ KKEE + E D
Sbjct: 1559 ENVDSGQFTYMSEDEKEENETYLSSIIKKEKKEEEGEDDEENQRDRNKEEDQDEDKDDDK 1618
Query: 444 FESVDKQRREEEMATWRKLIRGLGTDG 470
+ DK + EEE + ++ +G
Sbjct: 1619 DKDKDKDKEEEEEKKRKHILNNNNNNG 1645
Score = 47 (21.6 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 528 KRAREVRSY----EEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSS 574
KR+R+V + EE+ TE++F K+ + S + E+ L ++ +V S
Sbjct: 1823 KRSRKVININLMQEEKLTEKQFLKLIDSSSPNLLSSVEKDLGRNKKDIVKS 1873
Score = 46 (21.3 bits), Expect = 3.3e-63, Sum P(3) = 3.3e-63
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 2010 EEKTEGSEKDPDSSFAAQEDPKES-VVEAGDQMGVSLGGATVMEKSSEDL 2058
E+K + +KD D +E+ K ++ + G+ G+++ E E +
Sbjct: 1612 EDKDDDKDKDKDKDKEEEEEKKRKHILNNNNNNGIQ-NGSSINEGVKEKI 1660
Score = 45 (20.9 bits), Expect = 4.2e-63, Sum P(3) = 4.2e-63
Identities = 7/35 (20%), Positives = 20/35 (57%)
Query: 866 ESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSN 900
+ + ++ + NN+ G++ S++ G ++ + E N
Sbjct: 1632 KKRKHILNNNNNNGIQNGSSINEGVKEKILDEYCN 1666
Score = 43 (20.2 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 161 NELPEKIERLVRCEASAYQKLL--MKRVEENLGS------IGNSKGRSVHNSVMEL 208
N+ +KIE + + E Y K + ++ N+ S I N K + HN+ M L
Sbjct: 640 NDDIKKIEHVAKKELQEYIKQIHNKSKIHNNISSLKQYMLISNWKELTKHNNYMTL 695
Score = 41 (19.5 bits), Expect = 7.0e-39, Sum P(3) = 7.0e-39
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 741 GPDPKTNEQPQSESLNPSGGES 762
G P E P +E++N SG E+
Sbjct: 1266 GKQPNC-EMPGNENMNMSGNEN 1286
Score = 38 (18.4 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 752 SESLNPSGGESTATDGN--VSSIPTAPVPDSVSPS 784
+E++N SG E+ GN + I + D+ S S
Sbjct: 1340 NENMNMSGNENMNMSGNENIKMISSQNEKDTSSQS 1374
Score = 37 (18.1 bits), Expect = 2.9e-62, Sum P(3) = 2.9e-62
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 1879 VVEREKSEELGLPSLSSA---TKEEKID----GSLDKDPDSNLVVLEDSK 1921
++++EK EE G + KEE D DKD D + E+ K
Sbjct: 1584 IIKKEKKEEEGEDDEENQRDRNKEEDQDEDKDDDKDKDKDKDKEEEEEKK 1633
Score = 37 (18.1 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 752 SESLNPSGGESTATDGN 768
+E++N SG E+ GN
Sbjct: 1332 NENMNMSGNENMNMSGN 1348
Score = 37 (18.1 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 752 SESLNPSGGESTATDGN 768
+E++N SG E+ GN
Sbjct: 1324 NENMNMSGNENMNMSGN 1340
Score = 37 (18.1 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 752 SESLNPSGGESTATDGN 768
+E++N SG E+ GN
Sbjct: 1316 NENMNMSGNENMNMSGN 1332
Score = 37 (18.1 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 752 SESLNPSGGESTATDGN 768
+E++N SG E+ GN
Sbjct: 1308 NENMNMSGNENMNMSGN 1324
Score = 37 (18.1 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 752 SESLNPSGGESTATDGN 768
+E++N SG E+ GN
Sbjct: 1300 NENMNMSGNENMNMSGN 1316
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 491 (177.9 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 110/294 (37%), Positives = 166/294 (56%)
Query: 16 EKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSS 75
+K++ Q F++ +TT++ ++ ++ L KI W+YI++DEGHR+KN + + L ++S
Sbjct: 977 KKLLEQTFDICITTFDLVIK--EKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSK 1034
Query: 76 HRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXX 135
+R+LLTGTP IF+S DF +WF K + D
Sbjct: 1035 YRILLTGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDV---YEHITEEE 1091
Query: 136 XXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVE----ENLG 191
IINRLH VL PF+LRR+K V LP+K E + E S YQK+L K+++ + +
Sbjct: 1092 QLLIINRLHSVLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFKQVN 1151
Query: 192 SIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLL 251
G+ + N VM+LR I NHPYL L+ +D I++ GK E+LDR+L
Sbjct: 1152 HNGSITTKIFQNIVMQLRKIVNHPYLF-LYDYNIDE--------NIIKCSGKFEVLDRML 1202
Query: 252 PKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFN 305
PKL H+VL FS MT+L++++ DYL F+ Y+Y RLDG+ +R +ID+FN
Sbjct: 1203 PKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFN 1256
Score = 274 (101.5 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 61/145 (42%), Positives = 87/145 (60%)
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
QD+ IF+LS R+G +G+NLQ ADTVIIFD+D+NP D+QA R HRIGQK V V RF
Sbjct: 1401 QDA--MIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQKNVVKVFRF 1458
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXX 426
T+ VEE V A+HKL + ++ I AG F+ + EDR+ L+ +++ +K +
Sbjct: 1459 ITLSGVEELVFKKAQHKLSINDKVIQAGLFNKIYNDEDRQNKLKDIIQRNQKNDMTTHPT 1518
Query: 427 X-XXXXXXXXRSESEIDVFESVDKQ 450
R+E E++ F DK+
Sbjct: 1519 NPLLLNYYMKRNEEELEYFLDFDKR 1543
Score = 52 (23.4 bits), Expect = 3.9e-40, Sum P(3) = 3.9e-40
Identities = 18/87 (20%), Positives = 35/87 (40%)
Query: 389 QSITAGFFD--NNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXRSESEI---DV 443
+++ +G F + E+ YL S++++ KKEE + E D
Sbjct: 1559 ENVDSGQFTYMSEDEKEENETYLSSIIKKEKKEEEGEDDEENQRDRNKEEDQDEDKDDDK 1618
Query: 444 FESVDKQRREEEMATWRKLIRGLGTDG 470
+ DK + EEE + ++ +G
Sbjct: 1619 DKDKDKDKEEEEEKKRKHILNNNNNNG 1645
Score = 47 (21.6 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 528 KRAREVRSY----EEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSS 574
KR+R+V + EE+ TE++F K+ + S + E+ L ++ +V S
Sbjct: 1823 KRSRKVININLMQEEKLTEKQFLKLIDSSSPNLLSSVEKDLGRNKKDIVKS 1873
Score = 46 (21.3 bits), Expect = 3.3e-63, Sum P(3) = 3.3e-63
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 2010 EEKTEGSEKDPDSSFAAQEDPKES-VVEAGDQMGVSLGGATVMEKSSEDL 2058
E+K + +KD D +E+ K ++ + G+ G+++ E E +
Sbjct: 1612 EDKDDDKDKDKDKDKEEEEEKKRKHILNNNNNNGIQ-NGSSINEGVKEKI 1660
Score = 45 (20.9 bits), Expect = 4.2e-63, Sum P(3) = 4.2e-63
Identities = 7/35 (20%), Positives = 20/35 (57%)
Query: 866 ESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSN 900
+ + ++ + NN+ G++ S++ G ++ + E N
Sbjct: 1632 KKRKHILNNNNNNGIQNGSSINEGVKEKILDEYCN 1666
Score = 43 (20.2 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 161 NELPEKIERLVRCEASAYQKLL--MKRVEENLGS------IGNSKGRSVHNSVMEL 208
N+ +KIE + + E Y K + ++ N+ S I N K + HN+ M L
Sbjct: 640 NDDIKKIEHVAKKELQEYIKQIHNKSKIHNNISSLKQYMLISNWKELTKHNNYMTL 695
Score = 41 (19.5 bits), Expect = 7.0e-39, Sum P(3) = 7.0e-39
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 741 GPDPKTNEQPQSESLNPSGGES 762
G P E P +E++N SG E+
Sbjct: 1266 GKQPNC-EMPGNENMNMSGNEN 1286
Score = 38 (18.4 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 752 SESLNPSGGESTATDGN--VSSIPTAPVPDSVSPS 784
+E++N SG E+ GN + I + D+ S S
Sbjct: 1340 NENMNMSGNENMNMSGNENIKMISSQNEKDTSSQS 1374
Score = 37 (18.1 bits), Expect = 2.9e-62, Sum P(3) = 2.9e-62
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 1879 VVEREKSEELGLPSLSSA---TKEEKID----GSLDKDPDSNLVVLEDSK 1921
++++EK EE G + KEE D DKD D + E+ K
Sbjct: 1584 IIKKEKKEEEGEDDEENQRDRNKEEDQDEDKDDDKDKDKDKDKEEEEEKK 1633
Score = 37 (18.1 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 752 SESLNPSGGESTATDGN 768
+E++N SG E+ GN
Sbjct: 1332 NENMNMSGNENMNMSGN 1348
Score = 37 (18.1 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 752 SESLNPSGGESTATDGN 768
+E++N SG E+ GN
Sbjct: 1324 NENMNMSGNENMNMSGN 1340
Score = 37 (18.1 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 752 SESLNPSGGESTATDGN 768
+E++N SG E+ GN
Sbjct: 1316 NENMNMSGNENMNMSGN 1332
Score = 37 (18.1 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 752 SESLNPSGGESTATDGN 768
+E++N SG E+ GN
Sbjct: 1308 NENMNMSGNENMNMSGN 1324
Score = 37 (18.1 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 752 SESLNPSGGESTATDGN 768
+E++N SG E+ GN
Sbjct: 1300 NENMNMSGNENMNMSGN 1316
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 696 (250.1 bits), Expect = 3.1e-63, Sum P(2) = 3.1e-63
Identities = 167/453 (36%), Positives = 244/453 (53%)
Query: 16 EKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSS 75
E++V + F+V +T+YE ++ ++ L K W YIIIDE HRIKN L ++ + S
Sbjct: 279 ERLVDESFDVCITSYEMILR--EKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSR 336
Query: 76 HRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXX 135
+RLL+TGTP +F SE F QWF+ G +S
Sbjct: 337 NRLLITGTPLQNNIHELWALLNFLLPDVFGDSEAFDQWFS----GEGQDSD--------- 383
Query: 136 XXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVEENL 190
++ +LH+VLRPF+LRR+K VE L K E ++ + + YQK+L K ++
Sbjct: 384 --TVVQQLHRVLRPFLLRRVKADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDAVN 441
Query: 191 GSIGNSKGRS-VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDR 249
G+ G + ++ + N VM+LR CNHPYL + AE +L V GK+ +LD+
Sbjct: 442 GANGKRESKTRLLNIVMQLRKCCNHPYLFE-GAEPGPPYTTDEHL---VYNSGKMVVLDK 497
Query: 250 LLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDS 309
LL +LKA RVL FS M+R+LD++EDY F++Y+Y R+DG T+ DR A ID++N+ S
Sbjct: 498 LLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDGGTAHEDRIAAIDEYNKPGS 557
Query: 310 PFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETV 369
F+FLL+ RAGG+G+NL AD VI+FD+DWNPQ DLQA RAHRIGQ + V V RF
Sbjct: 558 EKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVYVYRFLVD 617
Query: 370 QTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXX 429
T+EE+V A KL + I G A ++ L S+++ +
Sbjct: 618 NTIEEKVLERAAQKLHLDRLVIQQGRAQVAAKAAANKDELLSMIQHGAAKVFNKDSDGDV 677
Query: 430 XXXXXXRSESEIDVFESVDKQRREEEMATWRKL 462
+ +I+ + + R E A + KL
Sbjct: 678 VKSADDIQDDDIEAMLASGESRTRELNARYEKL 710
Score = 40 (19.1 bits), Expect = 3.1e-63, Sum P(2) = 3.1e-63
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1459 KSTEGPSVSMKADDVADHSRETPILSG 1485
K ++G V ADD+ D E + SG
Sbjct: 671 KDSDGDVVK-SADDIQDDDIEAMLASG 696
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 682 (245.1 bits), Expect = 7.5e-63, Sum P(2) = 7.5e-63
Identities = 158/406 (38%), Positives = 231/406 (56%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
R I+ +F+VL+T+YE ++ ++ L ++ W YI+IDE HRIKN L+ ++ + S
Sbjct: 276 RNIILEARFDVLITSYEMVIR--EKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYS 333
Query: 75 SHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXX 134
+RLL+TGTP IF SE F +WF ++N + +
Sbjct: 334 KNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE---QNNSEQDQEI------ 384
Query: 135 XXXXIINRLHQVLRPFVLRRLKHKVENELPEKIER-----LVRCEASAYQKLLMKRVEEN 189
+I +LH VL PF+LRR+K VE L KIE + + Y+ LL K ++
Sbjct: 385 ----VIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAV 440
Query: 190 LGSIGNSKGRS-VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLD 248
G++G +G++ + N VM+LR CNHPYL + AE +L + GK+ +LD
Sbjct: 441 NGAVGKREGKTRLLNIVMQLRKCCNHPYLFE-GAEPGPPYTTDEHL---IFNSGKMIILD 496
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LL +LK RVL FS M+RLLD++EDY F+ + Y R+DG TS +R ID++N+ +
Sbjct: 497 KLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPN 556
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL+ RAGG+G+NL ADTVI+FD+DWNPQ DLQA RAHRIGQK+ V V RF T
Sbjct: 557 SEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVT 616
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
+EE+V A KL + I G S + ++ L +++
Sbjct: 617 ENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQ 662
Score = 51 (23.0 bits), Expect = 7.5e-63, Sum P(2) = 7.5e-63
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 1807 KSENMGE-KDDISSEHAFGSSLVLQDKASEAEIGDRIDE 1844
K+ ++G KDD+ FG+ + + KAS+ + ID+
Sbjct: 646 KTASLGNSKDDLLDMIQFGAKNMFEKKASKVTVDADIDD 684
Score = 37 (18.1 bits), Expect = 2.2e-61, Sum P(2) = 2.2e-61
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 533 VRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKS----LPTVV 572
VR YE+ ++ A D+P + E S LPT +
Sbjct: 1056 VREYEQPDANKKKRSRTSATREDTPLSQNESTRASTVPNLPTTM 1099
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 688 (247.2 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 162/406 (39%), Positives = 230/406 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 277 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 334
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+S++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 335 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 386
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K VE LP K E L + + Y K+LMK ++
Sbjct: 387 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 440
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE + IV GK+ L
Sbjct: 441 V-LNSSGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDEH---IVGNSGKMVAL 495
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LL ++K RVL FS MTRLLD++EDY ++ Y Y RLDG T +R ID FN
Sbjct: 496 DKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAP 555
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRIGQK+ V V R
Sbjct: 556 NSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLI 615
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 616 TDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMI 661
Score = 39 (18.8 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 1884 KSEELGLPSLSSATKEEKIDGS 1905
++ E+ P+++ +++KIDG+
Sbjct: 809 RNPEIPNPAIAQREEQKKIDGA 830
Score = 39 (18.8 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESK 2378
+ VP + P +A EE+ + EP+ ++ + K
Sbjct: 803 IGYKVPRNPEIPNPAIAQREEQKKIDGAEPLTPQETEEKDK 843
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 656 (236.0 bits), Expect = 2.0e-62, Sum P(5) = 2.0e-62
Identities = 159/410 (38%), Positives = 224/410 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 1075 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 1132
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1133 GTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF-------GDLKTEEQ----------VQ 1175
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 1176 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQA 1235
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTL---IPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ +T P L +++ GKL ++D
Sbjct: 1236 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLID 1295
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1296 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1355
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1356 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1415
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
+ E ++ A KLG+ QS++ N + ++ +E LLR+
Sbjct: 1416 RNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRK 1465
Score = 103 (41.3 bits), Expect = 2.0e-62, Sum P(5) = 2.0e-62
Identities = 55/178 (30%), Positives = 73/178 (41%)
Query: 2259 DAEANNIIDAEGGGNMRQTVPQDLGL---P--LSSSDVEEEKIEGFSKPVGSEKESIASA 2313
DA N G GNM P +G P LSS+ V+EEK G S+ G E S+A+
Sbjct: 2125 DAH-KNFAQNRGAGNMSSLGPLAVGFGQTPAILSSAHVQEEKATGQSEGKGEESGSVATQ 2183
Query: 2314 VPLDESKGPDAEV------SSQTA-IEGGGVVSIPVPEE--AD-GPASFL--AAEEEKNE 2361
E K D EV S Q E G V S E AD GP S +EE++ E
Sbjct: 2184 EKT-EGKEDDEEVDGGEKDSKQGCEAEAGSVRSELKGMEVTADTGPKSISEKGSEEDEEE 2242
Query: 2362 CSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGM----GGPSPPLVIAE 2415
+ + SQ+E K F+ + A + T +G G PS ++ E
Sbjct: 2243 KLEDDDKSEESSQLEGAVSRGKNFDEESNASMSTARDETRDGFYMEDGDPSVAQLLHE 2300
Score = 67 (28.6 bits), Expect = 2.0e-62, Sum P(5) = 2.0e-62
Identities = 23/81 (28%), Positives = 34/81 (41%)
Query: 2144 VTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEP 2203
V + D+K AE +L GG E +E+E E + P +D+ + P +
Sbjct: 1820 VGMPDAKAIAAEQRGT-DMLADGGDGGEFDREDEDPEYKPTRTPFKDEIDEFANSPPEDK 1878
Query: 2204 CVQMDVRGDGIVPETVPEELG 2224
MD+R G P ELG
Sbjct: 1879 EEAMDIRTTG-KPSESTAELG 1898
Score = 63 (27.2 bits), Expect = 9.1e-58, Sum P(5) = 9.1e-58
Identities = 24/73 (32%), Positives = 34/73 (46%)
Query: 2005 SLATPEEKTEGSEKDPDSSFAAQEDPKESV-VEAGDQMGVSLGGATVMEKSSEDLATPPL 2063
S+AT +EKTEG E D + ++D K+ EAG L G V + +
Sbjct: 2179 SVAT-QEKTEGKEDDEEVD-GGEKDSKQGCEAEAGSVRS-ELKGMEVTADTGPKSISEKG 2235
Query: 2064 SLANEEEMIEGFD 2076
S +EEE +E D
Sbjct: 2236 SEEDEEEKLEDDD 2248
Score = 62 (26.9 bits), Expect = 9.1e-58, Sum P(5) = 9.1e-58
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 2343 PEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALEN 2399
P++A+G A F EEE E SD E ++ E E E +D +DG LEN
Sbjct: 2936 PDKAEGGA-F--QEEENLEGSDAEENLDKTAESSIFEDEMAQGEELDSLDGGDELEN 2989
Score = 58 (25.5 bits), Expect = 3.0e-57, Sum P(5) = 3.0e-57
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 2165 GGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEP-CVQMDVRGDGIVPETVPEEL 2223
G G + +V +EKTE + + + D +G E E V+ +++G + +T P+ +
Sbjct: 2172 GKGEESGSVATQEKTEGKEDDEEVDGGEKDSKQGCEAEAGSVRSELKGMEVTADTGPKSI 2231
Score = 57 (25.1 bits), Expect = 2.5e-56, Sum P(5) = 2.5e-56
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 1981 AEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ 2040
A AG Q + EK P+ + EE EGS+ + + A+ E + G++
Sbjct: 2920 ALAGLQNAVGSGEEKAPDKAE--GGAFQEEENLEGSDAEENLDKTAESSIFEDEMAQGEE 2977
Query: 2041 MGVSLGGATVMEKSSED 2057
+ SL G +E + D
Sbjct: 2978 LD-SLDGGDELENNEND 2993
Score = 55 (24.4 bits), Expect = 9.1e-58, Sum P(5) = 9.1e-58
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 512 KGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPT 570
KGE G++ TQ GK E E E++ ++ C+AE+ S + + +G+E + T
Sbjct: 2173 KGEESGSVATQEKTEGKEDDE----EVDGGEKDSKQGCEAEAG-SVRSELKGMEVTADT 2226
Score = 50 (22.7 bits), Expect = 6.1e-57, Sum P(5) = 6.1e-57
Identities = 32/146 (21%), Positives = 57/146 (39%)
Query: 2253 GESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEE------KIEGFSKPVGSE 2306
G+S+G E+ ++ E D G S E E +++G +
Sbjct: 2168 GQSEGKGEESGSVATQEKTEGKEDDEEVDGGEKDSKQGCEAEAGSVRSELKGMEVTADTG 2227
Query: 2307 KESIAS-AVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDK 2365
+SI+ DE + + + S+ + + G VS + + AS A +E +
Sbjct: 2228 PKSISEKGSEEDEEEKLEDDDKSEESSQLEGAVSRGKNFDEESNASMSTARDETRDGFYM 2287
Query: 2366 EPVGSSVSQIESKEPEAKAFEPMDVV 2391
E SV+Q+ + A +F P D V
Sbjct: 2288 EDGDPSVAQLLHERTFAFSFWPKDRV 2313
Score = 49 (22.3 bits), Expect = 2.5e-56, Sum P(5) = 2.5e-56
Identities = 22/83 (26%), Positives = 37/83 (44%)
Query: 1946 QPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETV-AEAG----DQMDISIMPEKLPEHL 2000
+ S S+A E K +G + + V + SK+ AEAG + + + + P+ +
Sbjct: 2175 EESGSVATQE-KTEGKEDDEEVDGGE--KDSKQGCEAEAGSVRSELKGMEVTADTGPKSI 2231
Query: 2001 DIPASLATPEEKTEGSEKDPDSS 2023
S EEK E +K +SS
Sbjct: 2232 SEKGSEEDEEEKLEDDDKSEESS 2254
Score = 48 (22.0 bits), Expect = 9.1e-58, Sum P(5) = 9.1e-58
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 1310 TPVSSEAPASTEAFEQEKVTNTSSFVNLADLS-SDDKTCSVTPAMETAPGFDIPIEKGVE 1368
TP + ++P +F + S V A +S S+D T S + E A +P ++
Sbjct: 2348 TPPTMDSPLQKRSFAE------LSMVGQASISGSEDLTTSPQLSKEDALNLSVPRQRRRR 2401
Query: 1369 QSGTEIDAK 1377
+ EI+A+
Sbjct: 2402 RRKIEIEAE 2410
Score = 48 (22.0 bits), Expect = 9.1e-58, Sum P(5) = 9.1e-58
Identities = 19/68 (27%), Positives = 25/68 (36%)
Query: 2000 LDIPASLATPEEKTEGSEKDPDSSFA-AQEDPKESVVEAGD-QMGVSLGGATVMEKSSED 2057
L+ P S A T + DPD + +E E+ E D + AT S
Sbjct: 2813 LNSPLSAAAGNATTASGQGDPDDGTSKGEEKGNENEEENKDSEKSTDAVSATDSANGSVG 2872
Query: 2058 LATPPLSL 2065
AT P L
Sbjct: 2873 AATAPAGL 2880
Score = 47 (21.6 bits), Expect = 2.0e-62, Sum P(5) = 2.0e-62
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 1777 KADVVLDEHGKVQLLPGADNPEGGVIVPE 1805
+ +V+ D+ K+ L GAD+ E V +PE
Sbjct: 1748 RQEVIGDQADKI--LEGADSSEADVWIPE 1774
Score = 45 (20.9 bits), Expect = 6.6e-56, Sum P(5) = 6.6e-56
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 2147 EDSK-GFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPE 2200
+DSK G EAEA L+G V A+T + + S E + ++D+ K E
Sbjct: 2200 KDSKQGCEAEAGSVRSELKGMEVTADTGPKSISEKGSEEDEE--EKLEDDDKSEE 2252
Score = 45 (20.9 bits), Expect = 1.1e-55, Sum P(6) = 1.1e-55
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 438 ESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMKIYD 497
+ E+D E KQ E E + R ++G+ + P S +++D E K+ D
Sbjct: 2192 DEEVDGGEKDSKQGCEAEAGSVRSELKGMEVTADTGPKSISEKGSEED-----EEEKLED 2246
Query: 498 APKTGVSPNV-GVKRKGEH 515
K+ S + G +G++
Sbjct: 2247 DDKSEESSQLEGAVSRGKN 2265
Score = 44 (20.5 bits), Expect = 1.5e-60, Sum P(4) = 1.5e-60
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 1250 KPENKAQAGRIENIANSSPDDKSLPM 1275
KP I+ ANS P+DK M
Sbjct: 1857 KPTRTPFKDEIDEFANSPPEDKEEAM 1882
Score = 44 (20.5 bits), Expect = 1.0e-56, Sum P(6) = 1.0e-56
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 754 SLNPSGGEST-ATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNL 810
SL+ E T A + ++ + PT +P SP G +DP + + +N E T L
Sbjct: 2531 SLSAEDAEVTKAFEEDIETPPTRNIP---SP-------GQLDPDTRIPVINLEDGTRL 2578
Score = 43 (20.2 bits), Expect = 3.0e-57, Sum P(5) = 3.0e-57
Identities = 17/68 (25%), Positives = 31/68 (45%)
Query: 1992 MPEKLPEHLDIP-ASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATV 2050
MP +P++ D+ +S P++K ++P+ +E V + G +GGA
Sbjct: 2603 MPSYVPKNADVLFSSFQKPKQKRHRC-RNPNKLDINTLTGEERVPVVNKRNGKKMGGA-- 2659
Query: 2051 MEKSSEDL 2058
M +DL
Sbjct: 2660 MAPPMKDL 2667
Score = 43 (20.2 bits), Expect = 1.0e-56, Sum P(6) = 1.0e-56
Identities = 19/80 (23%), Positives = 36/80 (45%)
Query: 846 RRGKR--QALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQ 903
RRG+R + + +A + L + G+ L+ ++ Q+ S +L+ +
Sbjct: 2714 RRGRRPKSEIARAAAAAAAASTSGINPLLVNSLFAGMDLTSLQNL--QNLQSLQLAGLMG 2771
Query: 904 VQPCGVATSADVAGPDQKPA 923
P G+AT+A G + PA
Sbjct: 2772 FPP-GLATAAAAGGDTKNPA 2790
Score = 42 (19.8 bits), Expect = 1.6e-56, Sum P(5) = 1.6e-56
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 716 EQVP---RRRGKKIGLVLPAASDDIP 738
E+VP +R GKK+G + D+P
Sbjct: 2643 ERVPVVNKRNGKKMGGAMAPPMKDLP 2668
Score = 42 (19.8 bits), Expect = 1.6e-56, Sum P(5) = 1.6e-56
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 735 DDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSA 785
DD S G + + +++ S +ATD S+ A P + PS+
Sbjct: 2834 DDGTSKGEEKGNENEEENKDSEKSTDAVSATDSANGSVGAATAPAGL-PSS 2883
Score = 41 (19.5 bits), Expect = 2.0e-62, Sum P(5) = 2.0e-62
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQ 550
YG G R ++ S Y+ Q TE++ E +C+
Sbjct: 1615 YGWG-RWTDILSHGRYKRQLTEQDVETICR 1643
Score = 40 (19.1 bits), Expect = 1.1e-55, Sum P(6) = 1.1e-55
Identities = 13/57 (22%), Positives = 19/57 (33%)
Query: 1159 KAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVTPTVETPPPGFNSPN 1215
K + G EG D E A+ + ++ PT P PG P+
Sbjct: 2508 KRRRGRRKNVEGLDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPD 2564
Score = 37 (18.1 bits), Expect = 7.8e-60, Sum P(4) = 7.8e-60
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 1295 EQSRNQNNPEVKGEETPVSSE 1315
E R +PE K TP E
Sbjct: 1846 EFDREDEDPEYKPTRTPFKDE 1866
Score = 37 (18.1 bits), Expect = 1.1e-55, Sum P(6) = 1.1e-55
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 855 SPPISDVSAGPESKSNLQSENN---SGGLRLSKSVSMGKQDALS 895
+PP D S + L SG L+ S + K+DAL+
Sbjct: 2348 TPPTMDSPLQKRSFAELSMVGQASISGSEDLTTSPQLSKEDALN 2391
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 680 (244.4 bits), Expect = 2.8e-62, Sum P(2) = 2.8e-62
Identities = 160/406 (39%), Positives = 230/406 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 197 FIRDVMMPGEWDVCVTSYEMVIK--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 254
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
++++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 255 KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 306
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K +VE LP K E L + + Y ++LMK ++
Sbjct: 307 ------LVERLHAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDID 360
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE +L + GK+ +L
Sbjct: 361 I-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDTHL---ITNSGKMLVL 415
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LL KL+ RVL FS MTRLLD++EDY ++ Y Y RLDG T +R ID FN
Sbjct: 416 DKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAP 475
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S FIF+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQK+ V V R
Sbjct: 476 NSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLI 535
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 536 TDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKDEMLQMI 581
Score = 38 (18.4 bits), Expect = 2.8e-62, Sum P(2) = 2.8e-62
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 1306 KGEETPVSSEAPASTEAFEQEKVTNTSSFVN 1336
K E+ + P + E E+++ T F N
Sbjct: 741 KEEQKKIDESMPLNPEETEEKEKLLTQGFTN 771
Score = 38 (18.4 bits), Expect = 2.8e-62, Sum P(2) = 2.8e-62
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P + +EE+ + + P+ + E KE
Sbjct: 723 IGYKVPRNPDLPNAAQVQKEEQKKIDESMPLNPE--ETEEKE 762
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 678 (243.7 bits), Expect = 5.3e-62, Sum P(2) = 5.3e-62
Identities = 164/409 (40%), Positives = 230/409 (56%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 285 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 342
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+S++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 343 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 394
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA------YQKLLMKRV 186
++ RLH VL+PF+LRR+K VE LP K E V S Y K+LMK +
Sbjct: 395 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWWYTKILMKDI 448
Query: 187 EENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEM 246
+ L S G + N +M+LR CNHPYL AE + IV GK+ +
Sbjct: 449 DV-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDEH---IVSNSGKMVV 503
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGA--LIDKF 304
LD+LL KLK RVL FS MTRLLD++EDY ++ Y Y RLDG T +R I+ F
Sbjct: 504 LDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREKKEAIEAF 563
Query: 305 NQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVL 364
N +S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRIGQK+ V V
Sbjct: 564 NAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVF 623
Query: 365 RFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
R T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 624 RLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMI 672
Score = 45 (20.9 bits), Expect = 5.3e-62, Sum P(2) = 5.3e-62
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P +A EE+ + EP+ + + E KE
Sbjct: 814 IGYKVPRNPDIPNPAVAQREEQKKIDGAEPL--TPEETEEKE 853
Score = 37 (18.1 bits), Expect = 3.7e-61, Sum P(2) = 3.7e-61
Identities = 6/28 (21%), Positives = 18/28 (64%)
Query: 1884 KSEELGLPSLSSATKEEKIDGSLDKDPD 1911
++ ++ P+++ +++KIDG+ P+
Sbjct: 820 RNPDIPNPAVAQREEQKKIDGAEPLTPE 847
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 663 (238.4 bits), Expect = 4.8e-61, Sum P(2) = 4.8e-61
Identities = 164/418 (39%), Positives = 232/418 (55%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 252 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 309
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+S++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 310 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 361
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K VE LP K E L + + Y K+LMK ++
Sbjct: 362 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 415
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE + IV GK+ +L
Sbjct: 416 V-LNSSGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDEH---IVSNSGKMVVL 470
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDR---------- 297
D+LL KLK RVL FS MTRLLD++EDY ++ Y Y RLDG T +R
Sbjct: 471 DKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFL 530
Query: 298 GA--LIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRI 355
G I+ FN +S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRI
Sbjct: 531 GQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 590
Query: 356 GQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
GQK+ V V R T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 591 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMI 648
Score = 48 (22.0 bits), Expect = 4.8e-61, Sum P(2) = 4.8e-61
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P LA EE+ + EP+ + + E KE
Sbjct: 790 IGYKVPRNPDIPNPALAQREEQKKIDGAEPL--TPEETEEKE 829
Score = 40 (19.1 bits), Expect = 3.4e-60, Sum P(2) = 3.4e-60
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 1884 KSEELGLPSLSSATKEEKIDGSLDKDPD 1911
++ ++ P+L+ +++KIDG+ P+
Sbjct: 796 RNPDIPNPALAQREEQKKIDGAEPLTPE 823
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 668 (240.2 bits), Expect = 7.3e-61, Sum P(2) = 7.3e-61
Identities = 165/418 (39%), Positives = 233/418 (55%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 276 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 333
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+S++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 334 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 385
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K VE LP K E L + + Y K+LMK ++
Sbjct: 386 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE + IV GK+ +L
Sbjct: 440 V-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDEH---IVSNSGKMVVL 494
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDR--GAL----- 300
D+LL KLK RVL FS MTRLLD++EDY ++ Y Y RLDG T +R G L
Sbjct: 495 DKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEERENGFLQIYFR 554
Query: 301 -----IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRI 355
I+ FN +S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRI
Sbjct: 555 RRREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 614
Query: 356 GQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
GQK+ V V R T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 615 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMI 672
Score = 45 (20.9 bits), Expect = 7.3e-61, Sum P(2) = 7.3e-61
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P +A EE+ + EP+ + + E KE
Sbjct: 814 IGYKVPRNPDIPNPAVAQREEQKKIDGAEPL--TPEETEEKE 853
Score = 37 (18.1 bits), Expect = 5.0e-60, Sum P(2) = 5.0e-60
Identities = 6/28 (21%), Positives = 18/28 (64%)
Query: 1884 KSEELGLPSLSSATKEEKIDGSLDKDPD 1911
++ ++ P+++ +++KIDG+ P+
Sbjct: 820 RNPDIPNPAVAQREEQKKIDGAEPLTPE 847
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 674 (242.3 bits), Expect = 7.7e-61, Sum P(2) = 7.7e-61
Identities = 158/391 (40%), Positives = 226/391 (57%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYEY++ D+ +L+ I+W Y+ IDE HR+KN+ L L +++++RLL+T
Sbjct: 495 KFNILLTTYEYILK--DKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLIT 552
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F ++ + F++P N + D I
Sbjct: 553 GTPLQNNLKELASLVNFLMPGKFYIRDELN--FDQP---NAEQERD------------IR 595
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI-GNSKGR 199
L + L+PF+LRRLK VE LP K ER++R E S Q K + +N ++ G++ GR
Sbjct: 596 DLQERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGR 655
Query: 200 ---SVHNSVMELRNICNHPYLSQLHAEEV---DTLIPKHYLPPIVRLCGKLEMLDRLLPK 253
S+ N V+EL+ + NHPYL AE+ + + L I+ GK+ +LD+LL +
Sbjct: 656 GQLSLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQR 715
Query: 254 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 313
LK HRVL FS M R+L+++ +Y++ + Y Y RLDG R ID FN DSP F+
Sbjct: 716 LKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFV 775
Query: 314 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 373
FLLS RAGG+G+NL ADTVIIFD+DWNPQ DLQA ARAHRIGQK V V RF + TVE
Sbjct: 776 FLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVE 835
Query: 374 EQVRASAEHKLGVANQSITAGFFDNNTSAED 404
E + A K+ + I+ G + + ++++
Sbjct: 836 EDILERARRKMILEYAIISLGVTEKSKNSKN 866
Score = 47 (21.6 bits), Expect = 7.7e-61, Sum P(2) = 7.7e-61
Identities = 27/150 (18%), Positives = 53/150 (35%)
Query: 1190 KQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEA- 1248
K+ + K + + T +T G S + K + + RGD T G + E
Sbjct: 1214 KRKYNRKAPTKSSTRQTTLDGSISNTKKSSRTKKKKEEETNRGDETSPEGTVGEDEVEEE 1273
Query: 1249 ---LKPENKA---QAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNN 1302
+P +A +G+ + ++ + + TA D ++ + + +
Sbjct: 1274 PRQAEPPKRALRSNSGKAASNKRTTRNSMKTHSAMDTLTAVAALDAELDNMSNEKAKEEV 1333
Query: 1303 PEVKGEETPVSSEAPASTEAFEQEKVTNTS 1332
VK E +E + E E+ T S
Sbjct: 1334 DHVKSENGESVNEPNTEDLSLETEENTTVS 1363
Score = 46 (21.3 bits), Expect = 9.8e-61, Sum P(2) = 9.8e-61
Identities = 24/142 (16%), Positives = 56/142 (39%)
Query: 833 QSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQD 892
Q K + P + RQ IS+ +K + E N G S ++G +D
Sbjct: 1211 QPTKRKYNRKAPTKSSTRQTTLDGSISNTKKSSRTKKKKEEETNRGD-ETSPEGTVG-ED 1268
Query: 893 ALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGST 952
+ +E + + + +++ A +++ S++ + + A D+ +
Sbjct: 1269 EVEEE-PRQAEPPKRALRSNSGKAASNKRTTRNSMKTHSAMDTLTAVAALDAELDNMSNE 1327
Query: 953 PAQVPSMDLGNVASDTKEVLSE 974
A+ ++ +V S+ E ++E
Sbjct: 1328 KAKE---EVDHVKSENGESVNE 1346
Score = 45 (20.9 bits), Expect = 3.8e-59, Sum P(3) = 3.8e-59
Identities = 14/72 (19%), Positives = 27/72 (37%)
Query: 2369 GSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAEDKTEN-EIEEDPV 2427
G + S + K MD + AL+ + M + K+EN E +P
Sbjct: 1289 GKAASNKRTTRNSMKTHSAMDTLTAVAALDAELDNMSNEKAKEEVDHVKSENGESVNEPN 1348
Query: 2428 VNSVAVEESKGS 2439
+++E + +
Sbjct: 1349 TEDLSLETEENT 1360
Score = 38 (18.4 bits), Expect = 6.8e-60, Sum P(2) = 6.8e-60
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 784 SAVKGQSGTIDPSSAVAALNSELN 807
+++K S +D +AVAAL++EL+
Sbjct: 1300 NSMKTHSA-MDTLTAVAALDAELD 1322
Score = 38 (18.4 bits), Expect = 3.8e-59, Sum P(3) = 3.8e-59
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 2174 QEEEKTELSCEKQPIGSSVDDE-SKGP-EVEP 2203
++EE+T E P G+ +DE + P + EP
Sbjct: 1248 KKEEETNRGDETSPEGTVGEDEVEEEPRQAEP 1279
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 671 (241.3 bits), Expect = 7.9e-61, Sum P(3) = 7.9e-61
Identities = 159/403 (39%), Positives = 228/403 (56%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
++K++ F+V++ +YE ++ ++ L KI W YIIIDE HRIKN L+ L+ + S
Sbjct: 288 QKKLLGCDFDVVIASYEIIIR--EKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTS 345
Query: 75 SHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXX 134
+RLL+TGTP IF+ ++DF WF+ ES ++
Sbjct: 346 RNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSS--ESTEEDQDK------- 396
Query: 135 XXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI 193
I+ +LH VL+PF+LRR+K VE L K E + S+ QK K++ E++L ++
Sbjct: 397 ----IVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAV 452
Query: 194 GNSKGRS-----VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLD 248
S G + N +M+LR CNHPYL AE +L V KL++LD
Sbjct: 453 NGSNGSKESKTRLLNIMMQLRKCCNHPYLFD-GAEPGPPYTTDEHL---VYNAAKLQVLD 508
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LL KLK RVL FS M+RLLD++EDY F+ Y Y R+DG T+ DR ID +N D
Sbjct: 509 KLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPD 568
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL+ RAGG+G+NL +AD V+++D+DWNPQ DLQA RAHRIGQK+ V V R T
Sbjct: 569 SKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVT 628
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLES 411
+VEE++ A KL + +Q + N TS + + +S
Sbjct: 629 DNSVEEKILERATQKLRL-DQLVIQ---QNRTSLKKKENKADS 667
Score = 54 (24.1 bits), Expect = 7.9e-61, Sum P(3) = 7.9e-61
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 468 TDGEPLPPLP----SRLVTDDDLKALYEAMKIYDAPKTGVSPNV 507
T P P P S + LK LYE +++ A KTG P +
Sbjct: 792 TPSHPRMPKPHVFHSHQLQPPQLKVLYEKERMWTAKKTGYVPTM 835
Score = 39 (18.8 bits), Expect = 7.9e-61, Sum P(3) = 7.9e-61
Identities = 18/85 (21%), Positives = 35/85 (41%)
Query: 1829 LQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEEL 1888
+Q A E G ++E V ++ S + E +++ ++ + + ++R K ++
Sbjct: 907 IQAIARELAPGKTLEE--VRAYAKAFWSNI--ERIEDYEKYLKIIENEEEKIKRVKMQQE 962
Query: 1889 GLPSLSSATKEEKIDGSLDKDPDSN 1913
L S K D L P SN
Sbjct: 963 ALRRKLSEYKNPFFDLKLKHPPSSN 987
Score = 39 (18.8 bits), Expect = 2.9e-59, Sum P(3) = 2.9e-59
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 1127 SKTISLRSKQETADVNDVAR 1146
+KT SL +K ET ++D+ +
Sbjct: 717 NKTKSLNAKYETLGLDDLQK 736
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 663 (238.4 bits), Expect = 1.0e-60, Sum P(2) = 1.0e-60
Identities = 164/418 (39%), Positives = 232/418 (55%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 273 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 330
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+S++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 331 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 382
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K VE LP K E L + + Y K+LMK ++
Sbjct: 383 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 436
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE + IV GK+ +L
Sbjct: 437 V-LNSSGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDEH---IVSNSGKMVVL 491
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDR---------- 297
D+LL KLK RVL FS MTRLLD++EDY ++ Y Y RLDG T +R
Sbjct: 492 DKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFL 551
Query: 298 GA--LIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRI 355
G I+ FN +S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRI
Sbjct: 552 GQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 611
Query: 356 GQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
GQK+ V V R T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 612 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMI 669
Score = 48 (22.0 bits), Expect = 1.0e-60, Sum P(2) = 1.0e-60
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P LA EE+ + EP+ + + E KE
Sbjct: 811 IGYKVPRNPDIPNPALAQREEQKKIDGAEPL--TPEETEEKE 850
Score = 40 (19.1 bits), Expect = 7.1e-60, Sum P(2) = 7.1e-60
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 1884 KSEELGLPSLSSATKEEKIDGSLDKDPD 1911
++ ++ P+L+ +++KIDG+ P+
Sbjct: 817 RNPDIPNPALAQREEQKKIDGAEPLTPE 844
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 692 (248.7 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 165/410 (40%), Positives = 235/410 (57%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I W ++IDE HR+KN +CKL LK + H++LLT
Sbjct: 955 KFDALITTFEMILS--DCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLT 1012
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S +F + F GD + +
Sbjct: 1013 GTPLQNTVEELFSLLHFLEPAQFPSEIEFLREF-------GDLKTEEQ----------VQ 1055
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EEN-----LGSIGN 195
+L +L+P +LRRLK VE L K E ++ E + QK + + E N +G+ N
Sbjct: 1056 KLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGATQN 1115
Query: 196 SKGRSVHNSVMELRNICNHPYL-----SQLHAE--EV-DTLIPKHYLPPIVRLCGKLEML 247
S ++ N++MELR CNHPYL ++ +E EV D L P +L +VR GKL +L
Sbjct: 1116 SNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLL 1175
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLP+LKA H+VL FS M R LD++EDYL K+Y Y R+DG G R A ID+F++
Sbjct: 1176 DKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKP 1235
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
DS F+FLL RAGG+G+NL AADT +IFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 1236 DSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLI 1295
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDR--REYLESLLRE 415
T + E ++ A KLG+ ++++ N S+ + ++ +E LLR+
Sbjct: 1296 TRNSYEREMLDKASLKLGL-DRAVLQSMSGNKESSIQQFSKKEIEDLLRK 1344
Score = 53 (23.7 bits), Expect = 2.4e-59, Sum P(4) = 2.4e-59
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 2245 PSASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVG 2304
PS + G D+++++ D+ + R + D SDVE E+ G
Sbjct: 2091 PSERKLGGGGGGASDSDSDS--DSGSSSSSRHSGSSD---DSGDSDVEREQA-ALKMCDG 2144
Query: 2305 SEKESIASAVPLDESKGPDA 2324
E+ SI S P E P++
Sbjct: 2145 DEENSILSLTPSQEGAPPES 2164
Score = 45 (20.9 bits), Expect = 2.4e-59, Sum P(4) = 2.4e-59
Identities = 32/141 (22%), Positives = 53/141 (37%)
Query: 716 EQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTA 775
E+ R + I AA ++ G K +E P+ + E +V++
Sbjct: 1702 ERCGRPNEQDINAEQQAADPELGEGGDYDKYSEDPEFKPATRHAKEMYEEGDSVNADGEI 1761
Query: 776 PVPDSVSPSAVKG-QSGTID----PSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQT 830
V D +P V+G SG+ D P+S+ +L + L L TA +
Sbjct: 1762 CVEDRSAPMQVEGPSSGSSDLCYWPTSS--SLTARLR-RLITAYQRSYRREQLKIEAAE- 1817
Query: 831 KGQSRKTQSGGVTPRRRGKRQ 851
KG R+ + T + RQ
Sbjct: 1818 KGDRRRRRCEQATKLKEIARQ 1838
Score = 44 (20.5 bits), Expect = 1.6e-58, Sum P(4) = 1.6e-58
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 1313 SSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAP 1357
SS S++ V + + + D ++ S+TP+ E AP
Sbjct: 2117 SSRHSGSSDDSGDSDVEREQAALKMCDGDEENSILSLTPSQEGAP 2161
Score = 42 (19.8 bits), Expect = 1.6e-58, Sum P(4) = 1.6e-58
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 436 RSESEIDVFESVDKQRREEEMATWRKLI 463
R + +I+ E D++RR E AT K I
Sbjct: 1808 REQLKIEAAEKGDRRRRRCEQATKLKEI 1835
Score = 42 (19.8 bits), Expect = 6.5e-57, Sum P(5) = 6.5e-57
Identities = 26/113 (23%), Positives = 43/113 (38%)
Query: 2252 RGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVG-SEKESI 2310
+ ++ GP + GGG D G SSS + G S G S+ E
Sbjct: 2085 KSKNNGPSERK---LGGGGGGASDSDSDSDSG---SSSS---SRHSGSSDDSGDSDVERE 2135
Query: 2311 ASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECS 2363
+A+ + + ++ +S + EG S+ P D P + +N CS
Sbjct: 2136 QAALKMCDGDEENSILSLTPSQEGAPPESLTDPLRVDWPKDRILINRIENLCS 2188
Score = 41 (19.5 bits), Expect = 1.6e-58, Sum P(4) = 1.6e-58
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 551 AESSDSPKLKEEGLE 565
++S D +KEEGLE
Sbjct: 2033 SQSQDPAGIKEEGLE 2047
Score = 37 (18.1 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 436 RSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSR 479
R + E++ E V R ++ W K +G+ L L +R
Sbjct: 2276 RKDHELEDAEGVLHAPRRRDLPNWLKENPDYEVEGDMLELLVNR 2319
Score = 37 (18.1 bits), Expect = 2.4e-59, Sum P(4) = 2.4e-59
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 1725 DCLVASDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALL 1765
+ L SDS M L D VG + G + + GPS L
Sbjct: 2056 EALCPSDSPAMLLSHSDSKVGIQAGWVWKKSKNNGPSERKL 2096
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 664 (238.8 bits), Expect = 1.7e-60, Sum P(2) = 1.7e-60
Identities = 164/418 (39%), Positives = 232/418 (55%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 276 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 333
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+S++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 334 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 385
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K VE LP K E L + + Y K+LMK ++
Sbjct: 386 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE + IV GK+ +L
Sbjct: 440 V-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDEH---IVSNSGKMVVL 494
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDR---------- 297
D+LL KLK RVL FS MTRLLD++EDY ++ Y Y RLDG T +R
Sbjct: 495 DKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELL 554
Query: 298 GA--LIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRI 355
G I+ FN +S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRI
Sbjct: 555 GQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 614
Query: 356 GQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
GQK+ V V R T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 615 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMI 672
Score = 45 (20.9 bits), Expect = 1.7e-60, Sum P(2) = 1.7e-60
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P +A EE+ + EP+ + + E KE
Sbjct: 814 IGYKVPRNPDIPNPAVAQREEQKKIDGAEPL--TPEETEEKE 853
Score = 37 (18.1 bits), Expect = 1.2e-59, Sum P(2) = 1.2e-59
Identities = 6/28 (21%), Positives = 18/28 (64%)
Query: 1884 KSEELGLPSLSSATKEEKIDGSLDKDPD 1911
++ ++ P+++ +++KIDG+ P+
Sbjct: 820 RNPDIPNPAVAQREEQKKIDGAEPLTPE 847
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 674 (242.3 bits), Expect = 1.7e-60, Sum P(2) = 1.7e-60
Identities = 163/413 (39%), Positives = 237/413 (57%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 863 KFDALITTFEMVLS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 920
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S +F + F GD + +
Sbjct: 921 GTPLQNTVEELFSLLHFLEPTQFSSEAEFLKDF-------GDLKTEEQ----------VQ 963
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI--GNSKG 198
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G S+
Sbjct: 964 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGASQS 1023
Query: 199 RSVH--NSVMELRNICNHPYL-----SQLHAE--EVDTLIPKHY-LPPIVRLCGKLEMLD 248
+ + N++MELR CNHPYL ++ +E E ++P + + +VR GKL ++D
Sbjct: 1024 NTPNLLNTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDFHVQAMVRSSGKLVLID 1083
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKL+A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1084 KLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPD 1143
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1144 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLIT 1203
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSA---EDRREYLESLLRE 415
+ E ++ A KLG+ QS++ DN+ S + ++ +E LLR+
Sbjct: 1204 RNSYEREMFDKASLKLGLDKAVLQSMSGR--DNHLSGPIQQFTKKEIEDLLRK 1254
Score = 52 (23.4 bits), Expect = 1.7e-60, Sum P(2) = 1.7e-60
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 1995 KLPEHLDIPASLATPEEKTEGSEKDPDSSF-AAQEDPKESVVEAGDQMGVSLG 2046
+LP+ D + PE K ++KDP+ + D + SVV+ + + G
Sbjct: 1623 ELPDGGDFDRDIEDPEYKPLHAQKDPEDEIDSLMMDEEISVVDGEEATAMPSG 1675
Score = 41 (19.5 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 1443 TSEDSSKMPLETPLIMKSTEGP 1464
T+EDS + LETP ST+ P
Sbjct: 2000 TTEDSIQTALETP---HSTDWP 2018
Score = 38 (18.4 bits), Expect = 5.2e-59, Sum P(2) = 5.2e-59
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 477 PSRLVTDDDLKALYEAMKIYDAPKTGV 503
P+ L T+D ++ E D PK V
Sbjct: 1996 PADLTTEDSIQTALETPHSTDWPKDRV 2022
Score = 37 (18.1 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 11/51 (21%), Positives = 23/51 (45%)
Query: 906 PCGVATSADVAGPDQKPA------EQSVRVVQSNQPINLPATHDSSSQPSG 950
P G D+ P+ KP E + + ++ I++ ++++ PSG
Sbjct: 1625 PDGGDFDRDIEDPEYKPLHAQKDPEDEIDSLMMDEEISVVDGEEATAMPSG 1675
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 664 (238.8 bits), Expect = 2.0e-60, Sum P(2) = 2.0e-60
Identities = 164/418 (39%), Positives = 232/418 (55%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 276 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 333
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+S++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 334 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 385
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K VE LP K E L + + Y K+LMK ++
Sbjct: 386 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE + IV GK+ +L
Sbjct: 440 V-LNSAGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDEH---IVSNSGKMVVL 494
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDR---------- 297
D+LL KLK RVL FS MTRLLD++EDY ++ Y Y RLDG T +R
Sbjct: 495 DKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELL 554
Query: 298 GA--LIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRI 355
G I+ FN +S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRI
Sbjct: 555 GQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 614
Query: 356 GQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
GQK+ V V R T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 615 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMI 672
Score = 45 (20.9 bits), Expect = 2.0e-60, Sum P(2) = 2.0e-60
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P +A EE+ + EP+ + + E KE
Sbjct: 814 IGYKVPRNPDIPNPAVAQREEQKKIDGAEPL--TPEETEEKE 853
Score = 37 (18.1 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 6/28 (21%), Positives = 18/28 (64%)
Query: 1884 KSEELGLPSLSSATKEEKIDGSLDKDPD 1911
++ ++ P+++ +++KIDG+ P+
Sbjct: 820 RNPDIPNPAVAQREEQKKIDGAEPLTPE 847
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 669 (240.6 bits), Expect = 3.1e-60, Sum P(3) = 3.1e-60
Identities = 162/386 (41%), Positives = 216/386 (55%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
R+ I+ QKF+V TTYE ++ + +L K+ W YIIIDE HRIKN KL+ ++ S
Sbjct: 224 RDVILPQKFDVCCTTYEMMLKV--KTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNS 281
Query: 75 SHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWF-NKPFESNGDNSPDXXXXXX 133
+RLL+TGTP IF SS+DF WF N N D
Sbjct: 282 ENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNTD---------- 331
Query: 134 XXXXXIINRLHQVLRPFVLRRLKHKVENEL-PEKIER----LVRCEASAYQKLLMKRVEE 188
++ RLH+VL+PF+LRR+K VE L P+K + L + + Y K+LMK ++
Sbjct: 332 -----LVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDI 386
Query: 189 NLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLD 248
G+ K R + N +M LR NHPYL AE +L V GK+ +LD
Sbjct: 387 INGAGKVEKARLM-NILMHLRKCVNHPYLFD-GAEPGPPFTTDQHL---VDNSGKMVVLD 441
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LL K K RVL FS +R+LD++ED+ ++ Y Y RLDG T DR I+ +N D
Sbjct: 442 KLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPD 501
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S FIF+L+ RAGG+G+NL AD VII+D+DWNPQ DLQA RAHRIGQK+ V V R T
Sbjct: 502 SKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLIT 561
Query: 369 VQTVEEQVRASAEHKLGVANQSITAG 394
TV+E++ AE KL + N I G
Sbjct: 562 ENTVDERIIEKAEAKLRLDNIVIQQG 587
Score = 43 (20.2 bits), Expect = 3.1e-60, Sum P(3) = 3.1e-60
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 2159 QLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQM 2207
QL + G +T EEE L CE +G D E+ E+ V+M
Sbjct: 890 QLRISYGTNK-GKTYTEEEDRFLVCETHRLGH--DKENVFEELRQSVRM 935
Score = 37 (18.1 bits), Expect = 3.1e-60, Sum P(3) = 3.1e-60
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 1534 EIPSMEAEVAKCPSDAIVNN 1553
++P EAE + ++NN
Sbjct: 760 DVPPKEAEKRQAEEQKLINN 779
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 650 (233.9 bits), Expect = 3.4e-60, Sum P(3) = 3.4e-60
Identities = 156/406 (38%), Positives = 223/406 (54%)
Query: 14 SREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQ 73
SR + KFNVLLT+YE + D L I W +++DE HR+K+ K L Y
Sbjct: 838 SRLRTTQYKFNVLLTSYELI--SMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYT 895
Query: 74 SSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXX 133
+++LLLTGTP FN + F F D S +
Sbjct: 896 IAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEF-------ADVSKEEQ---- 944
Query: 134 XXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGS 192
+ RLH++L P +LRRLK V +P K E +VR E SA QK K + +N +
Sbjct: 945 ------VKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEA 998
Query: 193 IGNSKGR---SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHY-LPPIVRLCGKLEMLD 248
+ + G S+ N +M+L+ CNHPYL AEE T Y + + + GKL +L
Sbjct: 999 LNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLS 1058
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
++L +LKA +HRVL FS MT++LD++ED+L +QY+Y R+DG +G R ID+FN
Sbjct: 1059 KMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPG 1118
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
+ F+FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ V++ RF T
Sbjct: 1119 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1178
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
+VEE+V A+ K+ + + + G A ++ L+ +LR
Sbjct: 1179 RNSVEERVTQVAKRKMMLTHLVVRPGM--GGKGANFTKQELDDILR 1222
Score = 85 (35.0 bits), Expect = 3.4e-60, Sum P(3) = 3.4e-60
Identities = 55/183 (30%), Positives = 75/183 (40%)
Query: 2272 GNMRQTVPQDLG-LPLSSSDVEE-EKIEGF-SKP--VGSEKESIASAVPLDESK---GPD 2323
G RQ V +G + L V+E E I G+ S P + E + SA+ D + P
Sbjct: 1481 GLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSMPELILKPCEPVRSALKQDVAALEAPPT 1540
Query: 2324 AEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAK 2383
++A V P A PA E+K++ S+KE +S + E K+ E +
Sbjct: 1541 GGNVDKSATTSNSVT--PATSAAPSPAPASEKGEDKDKDSEKEKDKTSAEKSEVKQ-EQE 1597
Query: 2384 AFEPMDVVDGAVALENTSEGMGGPSPPLVIAEDKTE------NEIEEDPVVNSVAVEESK 2437
A E D G V EN E G + P AE KTE E +DP V E K
Sbjct: 1598 AEE--DKKPGDVKQENPVEEAAGDTKPSD-AEVKTEVAKTEPKEETKDPEVKEEPKTEEK 1654
Query: 2438 GSE 2440
E
Sbjct: 1655 EKE 1657
Score = 76 (31.8 bits), Expect = 3.0e-59, Sum P(3) = 3.0e-59
Identities = 41/160 (25%), Positives = 67/160 (41%)
Query: 1310 TPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETA----PGFDIPIEK 1365
TP +S AP+ A E+ + + S D +S +K+ V E PG D+ E
Sbjct: 1555 TPATSAAPSPAPASEKGEDKDKDSEKE-KDKTSAEKS-EVKQEQEAEEDKKPG-DVKQEN 1611
Query: 1366 GVEQSGTEI---DAKVKWKNTPL-PGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSLV 1421
VE++ + DA+VK + P E E PE K + + EK ++ VDD +
Sbjct: 1612 PVEEAAGDTKPSDAEVKTEVAKTEPKE------ETKDPEVKEEPKTEEKEKEKVDDKKPI 1665
Query: 1422 KELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKST 1461
D D++I G + S+ P + + +T
Sbjct: 1666 PPTTVIDDDDDDVMIVKEDGELEKPSASSPKDQKAVAAAT 1705
Score = 70 (29.7 bits), Expect = 1.3e-58, Sum P(3) = 1.3e-58
Identities = 28/102 (27%), Positives = 40/102 (39%)
Query: 1456 LIMKSTEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDVGNHPQNVEPTSA 1515
LI+K E P S DVA + E P G+ S T ++V+ T P
Sbjct: 1516 LILKPCE-PVRSALKQDVA--ALEAPPTGGNVDKSATTSNSVTPATSAAPSPAPASEKGE 1572
Query: 1516 SPERSGPQNSAVGFCDKSEIPS-MEAEVAKCPSDAIVNNLLE 1556
++ + +KSE+ EAE K P D N +E
Sbjct: 1573 DKDKDSEKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQENPVE 1614
Score = 60 (26.2 bits), Expect = 7.1e-57, Sum P(4) = 7.1e-57
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 2289 SDV-EEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEAD 2347
S+V +E++ E KP G K+ ++K DAEV ++ A + PE +
Sbjct: 1590 SEVKQEQEAEEDKKP-GDVKQENPVEEAAGDTKPSDAEVKTEVA-KTEPKEETKDPEVKE 1647
Query: 2348 GPASFLAAEEEKNECSDKEPV 2368
P + E+EK + DK+P+
Sbjct: 1648 EPKT---EEKEKEKVDDKKPI 1665
Score = 53 (23.7 bits), Expect = 7.6e-57, Sum P(3) = 7.6e-57
Identities = 30/108 (27%), Positives = 45/108 (41%)
Query: 1959 DGSSEKDPVSSQSVLEGSKETVAEA----GDQMDISIMPEKLPEHLDIPASLATPEEKTE 2014
D EKD S++ E +E AE GD + + E + A + T KTE
Sbjct: 1577 DSEKEKDKTSAEKS-EVKQEQEAEEDKKPGDVKQENPVEEAAGDTKPSDAEVKTEVAKTE 1635
Query: 2015 GSE--KDPDSSFAAQEDPK--ESVVEAGDQMGVSLGGATVMEKSSEDL 2058
E KDP+ +E+PK E E D + TV++ +D+
Sbjct: 1636 PKEETKDPE----VKEEPKTEEKEKEKVDDKK-PIPPTTVIDDDDDDV 1678
Score = 45 (20.9 bits), Expect = 7.1e-57, Sum P(4) = 7.1e-57
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 1990 SIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKE 2032
S+ P PAS E+K + SEK+ D + A + + K+
Sbjct: 1553 SVTPATSAAPSPAPAS-EKGEDKDKDSEKEKDKTSAEKSEVKQ 1594
Score = 45 (20.9 bits), Expect = 5.2e-56, Sum P(3) = 5.2e-56
Identities = 20/94 (21%), Positives = 32/94 (34%)
Query: 1191 QSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALK 1250
+ DKT + V+ ++ PG++ GD P KTE K
Sbjct: 1579 EKEKDKTSAEKSEVKQEQEA--EEDKKPGDVKQENPVEEAAGDTKPSDAEV---KTEVAK 1633
Query: 1251 PENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
E K + E ++K V + + PP
Sbjct: 1634 TEPKEETKDPEVKEEPKTEEKEKEKVDDKKPIPP 1667
Score = 43 (20.2 bits), Expect = 3.4e-60, Sum P(3) = 3.4e-60
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 445 ESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRL 480
+ D Q E A R+L R D PLPPL +R+
Sbjct: 1371 DDFDDQNGAERKAK-RRLER---RDDRPLPPLLARV 1402
Score = 43 (20.2 bits), Expect = 8.5e-56, Sum P(3) = 8.5e-56
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 743 DPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSA 798
DP+ E+P++E E D PT + D + + G ++ SA
Sbjct: 1642 DPEVKEEPKTEEK-----EKEKVDDKKPIPPTTVIDDDDDDVMIVKEDGELEKPSA 1692
Score = 43 (20.2 bits), Expect = 8.5e-56, Sum P(3) = 8.5e-56
Identities = 27/113 (23%), Positives = 42/113 (37%)
Query: 1348 SVTPAMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDS 1407
SVTPA AP EKG ++ K K + E KP + +
Sbjct: 1553 SVTPATSAAPSPAPASEKGEDKDKDSEKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQENP 1612
Query: 1408 VEKLE-DTVDDHSLVK-ELIHRSP--DHSDMVIGNVPGNTSEDSSKMPLETPL 1456
VE+ DT + VK E+ P + D + P ++ K+ + P+
Sbjct: 1613 VEEAAGDTKPSDAEVKTEVAKTEPKEETKDPEVKEEPKTEEKEKEKVDDKKPI 1665
Score = 42 (19.8 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 37/220 (16%), Positives = 76/220 (34%)
Query: 755 LNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVA-ALNSELNTNLATA 813
L P +A +V+++ P +V SA S T S+A + A SE +
Sbjct: 1518 LKPCEPVRSALKQDVAALEAPPTGGNVDKSATTSNSVTPATSAAPSPAPASEKGEDKDKD 1577
Query: 814 XXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPE-SKSNLQ 872
++ + ++ + + G + +A G SD E +K+ +
Sbjct: 1578 SEKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQENPVEEAAGDTKPSDAEVKTEVAKTEPK 1637
Query: 873 SENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQS 932
E ++ ++ +++ +K + P V D V +V+
Sbjct: 1638 EETKDPEVKEEPKT----EEKEKEKVDDKKPIPPTTVIDDDD----------DDVMIVKE 1683
Query: 933 NQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVL 972
+ + P+ Q + + + G A D+ EVL
Sbjct: 1684 DGELEKPSASSPKDQKAVAAATSAATGATGKGAEDSLEVL 1723
Score = 38 (18.4 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 436 RSESEIDVFESVDKQRREEEMATWRKLIR 464
+ E E + E + + + A W KL+R
Sbjct: 1278 KEEEEEEETEIIKQDAENSDPAYWVKLLR 1306
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 642 (231.1 bits), Expect = 4.9e-60, Sum P(2) = 4.9e-60
Identities = 179/571 (31%), Positives = 286/571 (50%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ L I+W +++DE HR+KN K L Y+ H+LLLT
Sbjct: 850 KFHVLLTSYELITI--DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 907
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP FN+ E F + F D S + I
Sbjct: 908 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ----------IK 950
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L S G
Sbjct: 951 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGN 1010
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLCGKLEMLDRLLPKLKA 256
S+ N +M+L+ CNHPYL + A E L Y +++ GKL +L ++L KLK
Sbjct: 1011 QVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKE 1070
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L ++ Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1071 QGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAHGAQQFCFLL 1130
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHRIGQ V++ RF T +VEE++
Sbjct: 1131 STRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERI 1190
Query: 377 RASAEHKLGVANQSITAGFFDN--NTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXX 434
A+ K+ + + + G + S ++ + L+ E K+E
Sbjct: 1191 TQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIH 1250
Query: 435 XRSES-------EIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT-DDDL 486
+E+ D E D Q E ++++ K+ + + + + + + ++ ++++
Sbjct: 1251 YDNEAIARLLDRNQDATEDTDVQNMNEYLSSF-KVAQYVVREEDKIEEIEREIIKQEENV 1309
Query: 487 KALYEAMKI---YDAPKTGVSPNVGV-KRKGEHLGALDTQHYGRGKRAREVRSYEEQWTE 542
Y + Y+ + ++ N+G KR + + D + ++ EE+ +
Sbjct: 1310 DPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEE--D 1367
Query: 543 EEFEKMCQAESSDSPKLKEEGLEKSLPTVVS 573
E+F++ + +L+ E +K LP +++
Sbjct: 1368 EDFDERPEGRRQSKRQLRNEK-DKPLPPLLA 1397
Score = 79 (32.9 bits), Expect = 4.9e-60, Sum P(2) = 4.9e-60
Identities = 35/138 (25%), Positives = 54/138 (39%)
Query: 1188 AKKQSSDDKTCSVTPTVE------TPPPGFNSPNEN-PGELTGTKNDASVRGDHTPVSGH 1240
+ + SS KT TP T P +P+E G T + D + + P
Sbjct: 1524 SSRASSPTKTSPTTPEASAANSPCTSKPATPAPSEKGDGIRTPLEKDEAENQEEKPEKNS 1583
Query: 1241 TLASK--TEALKPENKAQAG-RIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQS 1297
+ K TEA P G R+E P + +P VP E P ++ E+S
Sbjct: 1584 RIGEKMETEADTPSPAPSLGERLE--PRKMPLEDEVPGVPG-EMEP---ELGYRGDREKS 1637
Query: 1298 RNQNNPEVKGEETPVSSE 1315
++ P +GEE P+ +
Sbjct: 1638 ATESTPGERGEEKPMDGQ 1655
Score = 60 (26.2 bits), Expect = 2.2e-56, Sum P(3) = 2.2e-56
Identities = 18/69 (26%), Positives = 30/69 (43%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPS 796
+P PDP + + S + +P+ T + + ++ P P + +PS KG G P
Sbjct: 1510 MPELMPDPSADSKRSSRASSPTKTSPTTPEASAANSPCTSKPATPAPSE-KGD-GIRTPL 1567
Query: 797 SAVAALNSE 805
A N E
Sbjct: 1568 EKDEAENQE 1576
Score = 57 (25.1 bits), Expect = 4.5e-56, Sum P(3) = 4.5e-56
Identities = 26/90 (28%), Positives = 38/90 (42%)
Query: 678 SSQPTTAFVPVAPGSQSA-SACPSTPMQP----KGRGRRI-------QSGEQVPRRRGKK 725
+S PT P P + +A S C S P P KG G R ++ E+ P + +
Sbjct: 1527 ASSPTKTS-PTTPEASAANSPCTSKPATPAPSEKGDGIRTPLEKDEAENQEEKPEKNSR- 1584
Query: 726 IGLVLPAASDDIPSPGPDPKTNEQPQSESL 755
IG + +D PSP P +P+ L
Sbjct: 1585 IGEKMETEADT-PSPAPSLGERLEPRKMPL 1613
Score = 53 (23.7 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E+ D + + EE++E D+ P G S+ + + + K P+
Sbjct: 1351 EDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPL 1395
Score = 43 (20.2 bits), Expect = 1.3e-54, Sum P(3) = 1.3e-54
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 1486 SPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKC 1545
S +S T+ S + + N P +P + +P G +K E + E + K
Sbjct: 1525 SRASSPTKTSPTTPEASAANSPCTSKPATPAPSEKGDGIRTP--LEKDEAENQEEKPEK- 1581
Query: 1546 PSDAIVNNLLETPLDIKS 1563
++ + +ET D S
Sbjct: 1582 --NSRIGEKMETEADTPS 1597
Score = 40 (19.1 bits), Expect = 2.2e-56, Sum P(3) = 2.2e-56
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSM-SGVVDELVDEAGDHMG 1871
+ A+E+ G+R +E +DG R G +L A D G
Sbjct: 1635 EKSATESTPGERGEEKPMDGQEHRERPEGETGDLGKRAEDVKG 1677
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 638 (229.6 bits), Expect = 5.2e-60, Sum P(4) = 5.2e-60
Identities = 153/410 (37%), Positives = 222/410 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFNVL+TT+E ++ D L W +IDE HR+KN +CKL L+ HR+LL+
Sbjct: 2137 KFNVLITTFEMIVT--DYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLS 2194
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S E+F F + + +N
Sbjct: 2195 GTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGS-LRTEEE----------------VN 2237
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI--GNSKG 198
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 2238 KLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSA 2297
Query: 199 R--SVHNSVMELRNICNHPYLSQLHAEEVDTLI-------PKHYLPPIVRLCGKLEMLDR 249
++ N++MELR C HPYL E++ P+ Y ++ GK+ ++D+
Sbjct: 2298 NIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLIDK 2357
Query: 250 LLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDS 309
LLPKLKA HRVL FS M R LD++EDYL +++Y + R+DG G R ID++++ S
Sbjct: 2358 LLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGS 2417
Query: 310 PFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETV 369
F+FLL +AGG+G+NL AADTVII+D+DWNPQ DLQAQAR HRIGQ++ V + R
Sbjct: 2418 DRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCR 2477
Query: 370 QTVEEQVRASAEHKLGVAN---QSI-TAGFFDNNTSAEDRREYLESLLRE 415
T E ++ A KLG+ QS+ T G D N ++E +E LL++
Sbjct: 2478 NTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKE-IEDLLKK 2526
Score = 101 (40.6 bits), Expect = 1.3e-05, Sum P(5) = 1.3e-05
Identities = 51/222 (22%), Positives = 83/222 (37%)
Query: 1202 PTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIE 1261
P + P P +E EL D + G + T++ + + ++ A ++
Sbjct: 1665 PKEKAPEP---KQDEEKSELDEATTDKPEGDEKFKTEGESKKDLTDSEETKLESSAMEVD 1721
Query: 1262 NIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPE-VKGEETPVSSEAPAST 1320
+ S PDD N + D + K +++S+ + E VK EE + E S+
Sbjct: 1722 SKEESEPDDSKKSDEDNKDKDKMEVDDEVGKSDKESKPEEQSETVKTEENSKAIEEDKSS 1781
Query: 1321 EAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVKW 1380
+ + L + D+K A+ A G D EK + S E K
Sbjct: 1782 TVLTADHAKEPETV--LEKMEVDEKANDDQSAVSKAEGSD---EKSTDDSNPEEATTEKN 1836
Query: 1381 KNT-PLPGEA--IVAGIEVFKPEN--KTDGDSVEKLEDTVDD 1417
K + + GE + G E K EN KT+ D K E D
Sbjct: 1837 KESLEIEGEKERVKEGEESVKKENDEKTEADMENKPEPVFID 1878
Score = 95 (38.5 bits), Expect = 5.2e-60, Sum P(4) = 5.2e-60
Identities = 63/257 (24%), Positives = 103/257 (40%)
Query: 2173 VQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVPETVPEELGLPSSPMVV 2232
++EE K+E S EK +++D K + E ++ + D PET +E L S +
Sbjct: 3688 IKEEIKSEESPEKHDTADNLED--KNSDAEESTKIKGKED-FNPETTEKE-ALDESTNL- 3742
Query: 2233 XXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVE 2292
P E K E + AE G ++ P+
Sbjct: 3743 -NKDKSSTETLVPEIEDSKPSEDK---MEVEELPVAENGE--KEGSPEKCS-DAEDKKFS 3795
Query: 2293 EEKIEGFSKPVG--SEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPA 2350
EEK + P G SE E+ +A +E+ D+E S + E V + EE G
Sbjct: 3796 EEKPSSPAVPDGKVSEMEADEAAPNTEENCSGDSE-SPEKECEDKVVEKV---EEEKGEN 3851
Query: 2351 SFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPP 2410
S+ AEE+K E E SS+ S++ E + V + ++ + + GPS P
Sbjct: 3852 SYEKAEEQKEETEKLEK--SSIESEPSEKSETVLEPEVAVPKKSTGDQDILDLVAGPSDP 3909
Query: 2411 L--VIAEDKTENEIEED 2425
+ ++K E +EE+
Sbjct: 3910 DDDEVMKEK-EKAVEEE 3925
Score = 81 (33.6 bits), Expect = 5.2e-60, Sum P(4) = 5.2e-60
Identities = 42/192 (21%), Positives = 74/192 (38%)
Query: 865 PESKSNLQSENNSGGLRLSKS----VSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQ 920
P S SEN SGG ++S ++ + S+ L K VA ++ +
Sbjct: 3024 PSSSGKSSSENASGGNDKTESENDATTVSESSYKSEVLPGKGSDLDVSVAQQDALSATPE 3083
Query: 921 KPAEQSVRVVQSNQPINLPATHD--SSSQPSGSTPAQ---VPSMDLG--NVASDTKEVLS 973
++ +++ ++ + D SS P + AQ V + D G ++ S+ K+
Sbjct: 3084 LANTSDPKMNKNDAQVSASVSCDPADSSSPEAAGKAQGTGVQTGDAGELDIESEKKDNEK 3143
Query: 974 ENSSSKGGVIPILALSNMKAVERVN---IQSFEEKACTNASKSKATLPALDSITEPYTGS 1030
E S G + A + A+ R +S A TN S + T ++ T S
Sbjct: 3144 ETKESTGDAPAVEAKKDSAAIARAEGDKTESCTNNATTNISTTTTTTTITNTTTTTNNPS 3203
Query: 1031 TNTEGISNTIHH 1042
+ +NT H
Sbjct: 3204 SKAANSNNTTDH 3215
Score = 76 (31.8 bits), Expect = 1.3e-57, Sum P(5) = 1.3e-57
Identities = 40/206 (19%), Positives = 84/206 (40%)
Query: 1083 PTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADVN 1142
P +P GK QG+G D + + ++ ++++S G ++ +K+++A +
Sbjct: 3107 PADSSSPEAAGKAQGTGVQTGDAGELDIESEKKDNEKETKESTGDAP-AVEAKKDSAAI- 3164
Query: 1143 DVARVMKEIFSETCSSKAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVTP 1202
AR + +E+C++ A T S+ + A ++ D S +
Sbjct: 3165 --ARAEGDK-TESCTNNATTNISTTTTTTTITNTTTTTNNPSSKAANSNNTTDHANSNSH 3221
Query: 1203 T---VETPPPGFNSPN----ENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKA 1255
E G P E+ + + D + R ++ + K E LK + KA
Sbjct: 3222 LGLDEEESVAGSYPPTVAAVEDATTMWPSMQDLNTRLRRV-ITAYQRNYKKEELKLQQKA 3280
Query: 1256 QAGRIENIANSSPDDKSLPMVPNLET 1281
+++ + +S+P S+P P L++
Sbjct: 3281 ---KLQALVSSTPP-LSVPTTPTLQS 3302
Score = 73 (30.8 bits), Expect = 1.3e-05, Sum P(5) = 1.3e-05
Identities = 69/349 (19%), Positives = 120/349 (34%)
Query: 677 PSSQPTTAFVPVAPG-SQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASD 735
P+S T A V G S+ + G G ++ + + + G G S
Sbjct: 1336 PNSTETPAAVKKRAGASKRRKQYGEDGAEQTGEGSEVEDNKPLVPKAGSADGEA-ETTSG 1394
Query: 736 DIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDP 795
G P ++ P S+ P G + VPDS DP
Sbjct: 1395 GTGVDGESPDYDDIPVSKI--PRGSNEDEKEAEAGDETVDSVPDSAG-----------DP 1441
Query: 796 SSAVAALNSELNT--NLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQAL 853
+S + + + +T + A + K ++ G + P G+ L
Sbjct: 1442 ASTPSRRDRKRSTARSRRNANSEEGGSARKNRGSLSAKALKKRRNRGRIVPESDGEDDTL 1501
Query: 854 GSPPISDVSAGPESKSNLQ-SENNSGGLRLSKSVSMG-KQDALSQELSNKIQV--QPCGV 909
P E SN + S N+ + V + D S +++ ++ +P
Sbjct: 1502 DRTPPPSPPPDSEMDSNKRRSSRNTQRKKYIDDVMLRFSDDENSLLVASPVKKDKKPSAN 1561
Query: 910 ATSADVAGPD-QKPAEQSVRVVQSNQPI-----NLPATHDSSSQPSGSTPAQVP-----S 958
A++++ AG D +K QS + Q + NLP S + S ST A S
Sbjct: 1562 ASNSN-AGSDVEKTEPQSGAEGDAAQEVGEEKSNLPLDESSQLEASSSTSAVAEKERQIS 1620
Query: 959 MDLGNVASDTK-EVLSENSSSKGGVIPILALSNMKAVERVNIQSFEEKA 1006
D N A +K + N+ + ++ L L+ + + +EKA
Sbjct: 1621 TDAANAAMSSKPNYVYINTGDEDSMVVQLVLAMRMGKRELILDKPKEKA 1669
Score = 72 (30.4 bits), Expect = 3.5e-57, Sum P(5) = 3.5e-57
Identities = 43/209 (20%), Positives = 76/209 (36%)
Query: 2247 ASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGS- 2305
++ I E P+ +D N ++ + L + S E+K+E PV
Sbjct: 3717 STKIKGKEDFNPETTEKEALDESTNLNKDKSSTETLVPEIEDSKPSEDKMEVEELPVAEN 3776
Query: 2306 -EKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEE--KNEC 2362
EKE E K E S A+ G V + E A + + E + EC
Sbjct: 3777 GEKEGSPEKCSDAEDKKFSEEKPSSPAVPDGKVSEMEADEAAPNTEENCSGDSESPEKEC 3836
Query: 2363 SDK--EPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAEDKT-E 2419
DK E V + ++ E + E + ++ E + + P + + + T +
Sbjct: 3837 EDKVVEKVEEEKGENSYEKAEEQKEETEKLEKSSIESEPSEKSETVLEPEVAVPKKSTGD 3896
Query: 2420 NEIEE------DPVVNSVAVEESKGSEAD 2442
+I + DP + V E+ K E +
Sbjct: 3897 QDILDLVAGPSDPDDDEVMKEKEKAVEEE 3925
Score = 68 (29.0 bits), Expect = 1.3e-57, Sum P(5) = 1.3e-57
Identities = 52/215 (24%), Positives = 86/215 (40%)
Query: 1854 SMSGVVDELVDEAGDHMGV--SHSPVHVVERE-KSEEL--------GLPSLSSATKEE-K 1901
S+ V +L DE + V SPV ++ E KSEE L +S +E K
Sbjct: 3660 SVKNEVIDLDDELMTNESVIKKESPVTPIKEEIKSEESPEKHDTADNLEDKNSDAEESTK 3719
Query: 1902 IDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGS 1961
I G D +P++ D ++ D + +VPE + D +PS E K++
Sbjct: 3720 IKGKEDFNPETTEKEALDESTNLNK--DKSSTETLVPE-IED-SKPS------EDKME-- 3767
Query: 1962 SEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPD 2021
E+ PV+ EGS E ++A D+ E+ P +P + E E + +
Sbjct: 3768 VEELPVAENGEKEGSPEKCSDAEDKK----FSEEKPSSPAVPDGKVSEMEADEAAPNTEE 3823
Query: 2022 SSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSE 2056
+ E P++ + + G EK+ E
Sbjct: 3824 NCSGDSESPEKECEDKVVEKVEEEKGENSYEKAEE 3858
Score = 68 (29.0 bits), Expect = 1.7e-55, Sum P(6) = 1.7e-55
Identities = 59/301 (19%), Positives = 110/301 (36%)
Query: 1270 DKSLPMVPNLETAPPGFDIPIEKH--NEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEK 1327
D +L V ++ G D+ + NE N + + G+E V + +T+ + K
Sbjct: 2953 DPNLCFVTHVGAGAAGDDLAVTSLPINEDDANSKHDD--GDE--VDDDGTTTTKDSDSTK 3008
Query: 1328 VTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPG 1387
+T + +L D + + S + E A G + E E T + ++ +K+ LPG
Sbjct: 3009 LTGGDNKDSLLD--PERPSSSGKSSSENASGGNDKTES--ENDATTV-SESSYKSEVLPG 3063
Query: 1388 EAIVAGIEVFK-------PENKTDGD-SVEKLEDTVDDHSLVKELIHRSPDHSDMVIGN- 1438
+ + V + PE D + K + V SP+ + G
Sbjct: 3064 KGSDLDVSVAQQDALSATPELANTSDPKMNKNDAQVSASVSCDPADSSSPEAAGKAQGTG 3123
Query: 1439 -VPGNTSE---DSSKMPLETPLIMKSTEGPSVSMKADDVA------DHSRETPILSGSPI 1488
G+ E +S K E + + P+V K D A D + + + I
Sbjct: 3124 VQTGDAGELDIESEKKDNEKETKESTGDAPAVEAKKDSAAIARAEGDKTESCTNNATTNI 3183
Query: 1489 NSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPSD 1548
++ T +T++ T N+P + S + NS +G ++ + D
Sbjct: 3184 STTTTTTTITNTTTTTNNPSSKAANSNNTTDHANSNSHLGLDEEESVAGSYPPTVAAVED 3243
Query: 1549 A 1549
A
Sbjct: 3244 A 3244
Score = 68 (29.0 bits), Expect = 3.0e-53, Sum P(4) = 3.0e-53
Identities = 49/245 (20%), Positives = 85/245 (34%)
Query: 739 SPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSA 798
S G P T+ S + S A + +P P S P A + + A
Sbjct: 5094 SQGKMPSTSGSNTGTSTSSSKSSKAAATAAAAQLPQIPGMSSDFPQAFLAEMA----AQA 5149
Query: 799 VAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSP-P 857
+AA L + + G S + + +R+ ++ A
Sbjct: 5150 MAAAGGSLPLSGPGSLASLAGLTGGSAGG---GGSSASGSTSHSSSKRQREQDAFKQQMD 5206
Query: 858 ISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAG 917
+ G S +L +++GG S S + A + L + Q Q A S G
Sbjct: 5207 YYTKTLGLGSGISLIPTSSAGGSSASSSAANAAAAAYAAALDAEQQHQQQQKALSKRARG 5266
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQP-SGSTPAQVPSMDLGNVASDTKEVLSENS 976
D P ++ + + + P+NL A+ S + G + + S A K L+ +
Sbjct: 5267 -DLHPTKEELAALAAGLPLNLGASMSSIEKSLRGGSSSSSSSTPAPMTAEQDKVTLTPLN 5325
Query: 977 SSKGG 981
+S GG
Sbjct: 5326 ASGGG 5330
Score = 68 (29.0 bits), Expect = 2.2e-05, Sum P(7) = 2.2e-05
Identities = 39/152 (25%), Positives = 55/152 (36%)
Query: 829 QTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSM 888
QT Q ++ Q T +Q PI P + +L S N S + +
Sbjct: 708 QTSQQQQQPQQPQATLTSPHHQQMQHQSPIHQQQQSPHHQQHLPSYNQSQQQFDPFANIL 767
Query: 889 G-KQDALSQELSNKIQVQ-PCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSS 946
G Q A SQ+ + V P Q+P++Q V QS Q S
Sbjct: 768 GDNQPAASQQTMSPAHVSSPVPAQMQQQQHQTQQQPSQQ---VPQSQQ--------QQVS 816
Query: 947 QPSGSTPAQVPSMDLGNVASDTKEVLSENSSS 978
QP T Q PS +++S E + N SS
Sbjct: 817 QPQQQTQQQQPSTPSHHLSSILNETANSNDSS 848
Score = 66 (28.3 bits), Expect = 1.3e-57, Sum P(5) = 1.3e-57
Identities = 32/142 (22%), Positives = 55/142 (38%)
Query: 1141 VNDVARVMKEIFSETCSSKAKTGDSSLNEGKDXXXXXXXXXXXXXEVAK--KQSSDDKTC 1198
+N K+ SE + +A +G S G + + A +QSS +
Sbjct: 4159 LNSSTMAPKDWESEIANMEALSGSSGRGRGGNSSASSGMQPPPAHQHASLSRQSSGQFSK 4218
Query: 1199 SVTPTVETPPPGFNSPNENPGEL-----TGTKNDASVRG--DHTPVSGHTLASKTEALKP 1251
P ++TPPP +P + L T AS G D + V ++ SK ++
Sbjct: 4219 PAVPAMKTPPPSMGAPMDLSSSLPKMNMTEMLKSASSSGAIDLSEVQDFSMPSKKSSV-- 4276
Query: 1252 ENKAQAGRIENIANSSPDDKSL 1273
+ A + ++ N S D +L
Sbjct: 4277 -HAALSSAFPSMGNKSKLDDTL 4297
Score = 66 (28.3 bits), Expect = 0.00027, Sum P(5) = 0.00027
Identities = 64/302 (21%), Positives = 113/302 (37%)
Query: 675 IAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAAS 734
I +QP + ++P S S P+ MQ + + Q +QVP+ + +++
Sbjct: 766 ILGDNQPAASQQTMSPAHVS-SPVPAQ-MQQQQHQTQQQPSQQVPQSQQQQVSQPQQQTQ 823
Query: 735 DDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTID 794
PS P + +E+ N + + A N S+ ++ +S + S V Q ++
Sbjct: 824 QQQPST-PSHHLSSI-LNETANSNDSSTLAVAANDSNNSSS---NSSTNSIVNNQPTSVH 878
Query: 795 PSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALG 854
S++ +++NS N N Q G A+
Sbjct: 879 DSNSQSSINSSSN-NQQQLLMDNTNSHGGNSESAQNAGVDVGLFDNNSMSSNSAAVAAVA 937
Query: 855 SPPISDVSAGPESKS---NLQSENNSG---GLRLSKSVSMGKQDALSQELSNKIQVQPCG 908
S S +A +S S N + E N GL + + V + D L Q+ ++ + Q
Sbjct: 938 SNAASAAAALLDSNSQSSNAEFEKNQSEGEGLGVVEGVIANETD-LPQDENSVSKTQDIT 996
Query: 909 VATSADVAGPD--QKP-AE-QSVRVVQS-----NQPINLPAT-HDSSSQPSGSTPAQVPS 958
++T D +KP AE + ++ QS + P T +S S S P P
Sbjct: 997 LSTELPTIQDDLQEKPTAEMEQTQLGQSLGDLSKSLLEEPKTVEESGEDKSQSAPGVAPP 1056
Query: 959 MD 960
D
Sbjct: 1057 AD 1058
Score = 65 (27.9 bits), Expect = 1.5e-59, Sum P(5) = 1.5e-59
Identities = 55/252 (21%), Positives = 87/252 (34%)
Query: 1866 AGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLD-KDPDSNLVVLEDSKGSI 1924
AGD + V+ P++ + + G E DG+ KD DS + D+K S+
Sbjct: 2967 AGDDLAVTSLPINEDDANSKHDDG--------DEVDDDGTTTTKDSDSTKLTGGDNKDSL 3018
Query: 1925 GDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAG 1984
D SG EN S K + ++ VS S E + G
Sbjct: 3019 LDPERPSSSGKSSSENASG----------GNDKTESENDATTVSESSY---KSEVLPGKG 3065
Query: 1985 DQMDISIMPEKLPEHLDIPASLA-TPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMG- 2042
+D+S+ + + L LA T + K ++ +S + S AG G
Sbjct: 3066 SDLDVSVAQQ---DALSATPELANTSDPKMNKNDAQVSASVSCDPADSSSPEAAGKAQGT 3122
Query: 2043 -VSLGGATVMEKSSE--DLATPPLSLANEEEMIEGFDNDPTGISMAVMDSKE-CAAEAAD 2098
V G A ++ SE D + +E D I+ A D E C A
Sbjct: 3123 GVQTGDAGELDIESEKKDNEKETKESTGDAPAVEA-KKDSAAIARAEGDKTESCTNNATT 3181
Query: 2099 QMCVSEGCVVVT 2110
+ + +T
Sbjct: 3182 NISTTTTTTTIT 3193
Score = 65 (27.9 bits), Expect = 2.7e-57, Sum P(5) = 2.7e-57
Identities = 67/322 (20%), Positives = 119/322 (36%)
Query: 1881 EREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVL--EDSKGSIGDQMDCCQSGVVVP 1938
E+ + E +++ K E ID LD + +N V+ E I +++ +S P
Sbjct: 3645 EKAAATEKAAAEKAASVKNEVID--LDDELMTNESVIKKESPVTPIKEEIKSEES----P 3698
Query: 1939 E--NLSDFCQPSSSLAPWEAKIDG-------SSEKDPVSSQSVLEGSKETVAEAGDQMDI 1989
E + +D + +S A KI G ++EK+ + + L K + +++
Sbjct: 3699 EKHDTADNLEDKNSDAEESTKIKGKEDFNPETTEKEALDESTNLNKDKSSTETLVPEIED 3758
Query: 1990 SIMPEKLPEHLDIPASLATPEEKTEGS-EK--DPDSSFAAQEDPKESVVEAG--DQMGVS 2044
S E E ++P +A EK EGS EK D + ++E P V G +M
Sbjct: 3759 SKPSEDKMEVEELP--VAENGEK-EGSPEKCSDAEDKKFSEEKPSSPAVPDGKVSEMEAD 3815
Query: 2045 LGGATVMEKSSEDLATPPLSLANEEEMIEGFDNDPTGISMAVMDSKECAAEAADQMCV-S 2103
E S D +P E++++E + + S + ++ E ++ + S
Sbjct: 3816 EAAPNTEENCSGDSESPEKEC--EDKVVEKVEEEKGENSYEKAEEQKEETEKLEKSSIES 3873
Query: 2104 EGCVVVTEKLSEDLGLNXXXXXXXXXXXXXXXXXDPVNSSVTVEDSKGFEAEACDQLHVL 2163
E L ++ + DP + V E K E E Q L
Sbjct: 3874 EPSEKSETVLEPEVAVPKKSTGDQDILDLVAGPSDPDDDEVMKEKEKAVEEECKKQAAEL 3933
Query: 2164 RGGGVVAETVQEEEKTELSCEK 2185
+ E +Q + EK
Sbjct: 3934 KARFPDLEVIQPATVKQQKLEK 3955
Score = 64 (27.6 bits), Expect = 8.2e-55, Sum P(4) = 8.2e-55
Identities = 26/90 (28%), Positives = 40/90 (44%)
Query: 715 GEQVPRRRGKKIGLVLPAASDD--IPSPG-PDPKTNEQPQSESLNPSGGESTATD-GNVS 770
G++ R++ +I L L AA + P P P K + P S S+ P+ +S++ N
Sbjct: 4314 GKEKKRKKLDEIVLGLSAAKEQKTFPDPSLPSSKKPQIPPSVSVTPANLQSSSNQQSNQK 4373
Query: 771 --SIPTAPVPDSVSPSAVKGQSGTIDPSSA 798
+I VP + SGT SSA
Sbjct: 4374 PFTITVTTVPGKSKSGSSNSGSGTGGSSSA 4403
Score = 62 (26.9 bits), Expect = 2.7e-54, Sum P(7) = 2.7e-54
Identities = 29/123 (23%), Positives = 53/123 (43%)
Query: 861 VSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQ---VQPCGVATSADVAG 917
+SA PE + + N ++S SVS D+ S E + K Q VQ G A D+
Sbjct: 3078 LSATPELANTSDPKMNKNDAQVSASVSCDPADSSSPEAAGKAQGTGVQT-GDAGELDIES 3136
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSS--QPSGSTPAQVPSMDLGNVASDTKEVLSEN 975
++K E+ + + P + A DS++ + G + N+++ T N
Sbjct: 3137 -EKKDNEKETKESTGDAPA-VEAKKDSAAIARAEGDKTESCTNNATTNISTTTTTTTITN 3194
Query: 976 SSS 978
+++
Sbjct: 3195 TTT 3197
Score = 57 (25.1 bits), Expect = 2.1e-55, Sum P(6) = 2.1e-55
Identities = 37/170 (21%), Positives = 62/170 (36%)
Query: 1238 SGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQS 1297
SG + A A + +++ S S P VP ++T PP P++ +
Sbjct: 4183 SGRGRGGNSSASSGMQPPPAHQHASLSRQSSGQFSKPAVPAMKTPPPSMGAPMDLSSSLP 4242
Query: 1298 RNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAP 1357
+ +K SS + + + S V+ A LSS P+M
Sbjct: 4243 KMNMTEMLKS----ASSSGAIDLSEVQDFSMPSKKSSVHAA-LSS------AFPSMGNKS 4291
Query: 1358 GFDIPIEKGVEQSGTEIDAKVKWKNTPLPG-EAIVAGIEVFKPENKTDGD 1406
D + K ++++ I+ V K + IV G+ K E KT D
Sbjct: 4292 KLDDTLNKLMKKNNCTIEEPVIGKEKKRKKLDEIVLGLSAAK-EQKTFPD 4340
Score = 56 (24.8 bits), Expect = 1.5e-59, Sum P(5) = 1.5e-59
Identities = 34/149 (22%), Positives = 59/149 (39%)
Query: 1293 HNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVT--NTSSFVNLADLSSDDKTCSVT 1350
HN R +N + E T VS+ AP S T + SS ++ +D S S
Sbjct: 2780 HNLVPRGRNGGKSNKESTGVSTPAPGSASGSNSGNTTPAHKSSALDGSDKDSGGINASAV 2839
Query: 1351 PAMETA---PGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEV-FKPENKTDGD 1406
A T+ P EK + ++ K K+ ++ + + + +++ GD
Sbjct: 2840 AAAVTSIHDPNHWSKKEK--YDADAYLEGAYK-KHLGRHANKVLLRVRMLYYIQHEVIGD 2896
Query: 1407 SVEKLEDTVDDHSLVKELIHRSPDHSDMV 1435
V++++D + EL R P D V
Sbjct: 2897 FVQQIKDNTP----ISELPIRPPPTPDQV 2921
Score = 56 (24.8 bits), Expect = 3.3e-51, Sum P(5) = 3.3e-51
Identities = 73/333 (21%), Positives = 120/333 (36%)
Query: 690 PGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQ 749
PG Q+ + P+ K G+R+ G + P+ K++ L + P+ DPK EQ
Sbjct: 4563 PGPQNLTGEEPVPVINKQTGKRL-GGNKAPQL--KRLMQWLT----ENPNYEVDPKWLEQ 4615
Query: 750 PQSESLNPSGGESTATDGNVSSIPTAPVPDSVSP-SAVKGQSGTIDPSSAVAALNSELNT 808
Q+ PS ++ G SS + +S S+ S T SSA S+
Sbjct: 4616 MQNPMSTPSPRPASMESGYGSSAVKSHGGRPLSNLSSTSSSSHTQQQSSAA---QSQAGG 4672
Query: 809 NLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESK 868
N ++ Q Q G+ P LG+ + A + K
Sbjct: 4673 NSGSSKKNSRQQTAASAALDQAALQFGSL--AGLNPSLLANLPGLGAFDPKNPLAAFDPK 4730
Query: 869 SNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVR 928
+ L S + GG+ MG L + + G+ ++AG D QS+
Sbjct: 4731 NPLLSMS-FGGMP-----GMGNIPGLGNLNNMNLFASLAGMGGLGNLAGMDT----QSLA 4780
Query: 929 VVQSNQPINLPA-THDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILA 987
+ + L T S SG + AQ S + +S +K+ + LA
Sbjct: 4781 ALMAAAGPTLGGLTGASGGAGSGKSQAQSQSSATSSSSSASKKKQQQQQQQAQNEAAQLA 4840
Query: 988 LSNMKAVERVNIQSFEEKACTNASKSKATLPAL 1020
+ + A + S + A +AS+ A P L
Sbjct: 4841 AA-ISASTGGSGASGGKNAAASASQLAAGFPFL 4872
Score = 55 (24.4 bits), Expect = 2.2e-05, Sum P(7) = 2.2e-05
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 739 SPG-PDPKTNEQPQSESLNPSGGESTA-TDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPS 796
SP P P +Q Q+++ P S + ++ + P P P++ G +G P+
Sbjct: 429 SPAKPPPPQQQQQQTQAQQPQQVVSNQPSQHSIQGMVGLPSPRPQPPTSGAGGAGAKGPA 488
Query: 797 SAVAALNS 804
A +N+
Sbjct: 489 PVAAPVNT 496
Score = 53 (23.7 bits), Expect = 1.3e-57, Sum P(5) = 1.3e-57
Identities = 21/75 (28%), Positives = 31/75 (41%)
Query: 1457 IMKSTEGPSVSMKADDVADHSRETPILSGSPIN-----SGTECSTVSVKTDVGNHPQNVE 1511
I KS G S S + A + E ++ +P+N SG+ S+ + N P
Sbjct: 5293 IEKSLRGGSSSSSSSTPAPMTAEQDKVTLTPLNASGGGSGSSSSSAAAAGLAANLPSQTT 5352
Query: 1512 PTSASPERSGPQNSA 1526
T A P SG S+
Sbjct: 5353 ITIAPPISSGASTSS 5367
Score = 53 (23.7 bits), Expect = 1.3e-57, Sum P(5) = 1.3e-57
Identities = 22/93 (23%), Positives = 31/93 (33%)
Query: 2322 PDAEVSSQTAIEGGGVVSIPVPEEADGPAS----FLAAEEEKNECSDKEPVGSSVSQIES 2377
P +S+ T GGV + VP G +A + E + SS +
Sbjct: 4109 PGMSLSAATGSSAGGVSGLSVPSAGSGVGKKRKRHIAIDVETERAKLHALLNSSTMAPKD 4168
Query: 2378 KEPEAKAFEPMDVVDGAVALENTSEGMGGPSPP 2410
E E E + G N+S G PP
Sbjct: 4169 WESEIANMEALSGSSGRGRGGNSSASSGMQPPP 4201
Score = 53 (23.7 bits), Expect = 8.2e-55, Sum P(4) = 8.2e-55
Identities = 43/202 (21%), Positives = 81/202 (40%)
Query: 858 ISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCG---VATSAD 914
++ ++ + S+ QS+++ + S+S + + L N + G V T +
Sbjct: 4912 LNGATSSASNTSSTQSKSHQSQSKSSQSRNTTASANSAASLMNAMASMGGGASTVTTPST 4971
Query: 915 VAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTP------AQVPSMDLGN----V 964
A + + S R P SS G+ P +++ +MDL +
Sbjct: 4972 SASGSGRGRQSSSRNQSQTTPTAADMAQLSSLLMPGADPHLLESLSRMSNMDLAQATRLM 5031
Query: 965 ASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLP----AL 1020
+S LS SS GG + + +A N+Q+ E++ S ++ LP AL
Sbjct: 5032 SSLGMPPLSGTPSSSGGGNTSTSKRSSQAANEANVQAKEQQKWLE-SLARGALPTDLAAL 5090
Query: 1021 DSITE---PYTGSTNTEGISNT 1039
+ ++ P T +NT G S +
Sbjct: 5091 QAFSQGKMPSTSGSNT-GTSTS 5111
Score = 52 (23.4 bits), Expect = 4.0e-55, Sum P(5) = 4.0e-55
Identities = 22/93 (23%), Positives = 39/93 (41%)
Query: 2351 SFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPP 2410
+F A + EK ++K+ + E E A +V+D L + SP
Sbjct: 3626 AFNAEKAEKLAAAEKDAATEKAAATEKAAAEKAASVKNEVIDLDDELMTNESVIKKESPV 3685
Query: 2411 LVIAED-KTENEIEEDPVVNSVAVEESKGSEAD 2442
I E+ K+E E+ +++ E K S+A+
Sbjct: 3686 TPIKEEIKSEESPEKHDTADNL---EDKNSDAE 3715
Score = 52 (23.4 bits), Expect = 4.9e-54, Sum P(3) = 4.9e-54
Identities = 30/111 (27%), Positives = 41/111 (36%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAAS-DDIPSPGPDPKTNEQ 749
G S PST GRGR+ S R + + A + PG DP E
Sbjct: 4961 GGASTVTTPSTSASGSGRGRQSSS-----RNQSQTTPTAADMAQLSSLLMPGADPHLLES 5015
Query: 750 PQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVA 800
S N ++T +SS+ P+ + S S G + T SS A
Sbjct: 5016 -LSRMSNMDLAQATRL---MSSLGMPPLSGTPSSSG-GGNTSTSKRSSQAA 5061
Score = 51 (23.0 bits), Expect = 2.2e-05, Sum P(7) = 2.2e-05
Identities = 12/60 (20%), Positives = 26/60 (43%)
Query: 1114 NQHSQNKSRDSF-GSKTISLRSKQETADVNDVARVMKEIFSETCSSKAKTGDSSLNEGKD 1172
N S N S +S ++ S+ + +N + +++ + +S +S+ N G D
Sbjct: 858 NNSSSNSSTNSIVNNQPTSVHDSNSQSSINSSSNNQQQLLMDNTNSHGGNSESAQNAGVD 917
Score = 50 (22.7 bits), Expect = 5.5e-53, Sum P(3) = 5.5e-53
Identities = 25/91 (27%), Positives = 38/91 (41%)
Query: 730 LPAASDDIPSPGPDPKTNEQPQSE--SLNPSGGESTATDGNVSSIPTAP-VPD----SVS 782
L S S P P T EQ + LN SGG S ++ + ++ A +P +++
Sbjct: 5297 LRGGSSSSSSSTPAPMTAEQDKVTLTPLNASGGGSGSSSSSAAAAGLAANLPSQTTITIA 5356
Query: 783 PSAVKGQSGTIDPSSAVAALNSELNTNLATA 813
P G S + + S + S TN A A
Sbjct: 5357 PPISSGASTSSERSERSESRISLTITNAADA 5387
Score = 49 (22.3 bits), Expect = 1.5e-59, Sum P(5) = 1.5e-59
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 844 PRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSN 900
PRRR + + G + ++++ E SN ++ + GG+ L K+D ++ N
Sbjct: 2617 PRRRTQIKRYGHEDVMELNS--EESSN-ENSDEEGGIGLRSRRRKEKRDRAREKKGN 2670
Score = 49 (22.3 bits), Expect = 1.3e-57, Sum P(5) = 1.3e-57
Identities = 19/65 (29%), Positives = 24/65 (36%)
Query: 729 VLPAASDDIP-SPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVK 787
VLP D+ S + P E N S + D VS+ + DS SP A
Sbjct: 3060 VLPGKGSDLDVSVAQQDALSATP--ELANTSDPKMNKNDAQVSASVSCDPADSSSPEAAG 3117
Query: 788 GQSGT 792
GT
Sbjct: 3118 KAQGT 3122
Score = 49 (22.3 bits), Expect = 2.7e-54, Sum P(7) = 2.7e-54
Identities = 31/142 (21%), Positives = 53/142 (37%)
Query: 679 SQPTTAFVP-VAPGSQSAS-ACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDD 736
+ P FV V G+ A S P+ + G++V G SD
Sbjct: 2952 ADPNLCFVTHVGAGAAGDDLAVTSLPINEDDANSKHDDGDEVDDD-----GTTTTKDSDS 3006
Query: 737 IPSPGPDPKTN----EQP----QSESLNPSGG-ESTATDGNVSSIPTAPVPDSVSPSAVK 787
G D K + E+P +S S N SGG + T ++ + +++ + V P
Sbjct: 3007 TKLTGGDNKDSLLDPERPSSSGKSSSENASGGNDKTESENDATTVSESSYKSEVLPGKGS 3066
Query: 788 GQSGTIDPSSAVAALNSELNTN 809
++ A++A NT+
Sbjct: 3067 DLDVSVAQQDALSATPELANTS 3088
Score = 49 (22.3 bits), Expect = 1.1e-53, Sum P(5) = 1.1e-53
Identities = 30/119 (25%), Positives = 47/119 (39%)
Query: 692 SQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQ 751
+ SASA ++ P+ + S +P K I + AA + G N
Sbjct: 4050 ASSASAASTSSGVPQVTQSKPSSSNSLPGLDAKSINAAVAAAVAAAAAGG-----NATSL 4104
Query: 752 SESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSG-TIDPSSAVAALNSELNTN 809
S SL P S AT + + VP + S K + ID + A L++ LN++
Sbjct: 4105 S-SLLPGMSLSAATGSSAGGVSGLSVPSAGSGVGKKRKRHIAIDVETERAKLHALLNSS 4162
Score = 48 (22.0 bits), Expect = 1.8e-54, Sum P(6) = 1.8e-54
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 1188 AKKQSSDDKTCSVTP---TVETPPPGFNSPNENPGELTGTKNDASVRG 1232
A QSS ++ + P TV T P S + N G TG + AS G
Sbjct: 4360 ANLQSSSNQQSNQKPFTITVTTVPGKSKSGSSNSGSGTGGSSSASGGG 4407
Score = 47 (21.6 bits), Expect = 2.5e-56, Sum P(6) = 2.5e-56
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 1537 SMEAEVAKCPSDAIVNNLLETPLDIKSIG-GPIVSMKAADVADADHPLETAVELGSPVNS 1595
S + P A + + TPL+ G G S AA A+ P +T + + P++S
Sbjct: 5302 SSSSSSTPAPMTAEQDKVTLTPLNASGGGSGSSSSSAAAAGLAANLPSQTTITIAPPISS 5361
Score = 46 (21.3 bits), Expect = 1.3e-57, Sum P(5) = 1.3e-57
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 1073 VPVKRHGRKTPTTGEAPRRRGKK----QGSGPSIPDGSAVFDAKLNQHSQNKSRDSFG 1126
+PV +G K + + KK + S P++PDG V + + ++ + N + G
Sbjct: 3771 LPVAENGEKEGSPEKCSDAEDKKFSEEKPSSPAVPDGK-VSEMEADEAAPNTEENCSG 3827
Score = 46 (21.3 bits), Expect = 2.5e-56, Sum P(6) = 2.5e-56
Identities = 28/107 (26%), Positives = 43/107 (40%)
Query: 1448 SKMPLETPLIMKSTEGPS--VSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDVGN 1505
+K P L+ TE P+ V K + + TP + + SG S +VK+ G
Sbjct: 4588 NKAPQLKRLMQWLTENPNYEVDPKWLEQMQNPMSTPSPRPASMESGYGSS--AVKSHGGR 4645
Query: 1506 HPQNVEPTSASP----ERSGPQNSAVGFCDKSEIPSMEAEVAKCPSD 1548
N+ TS+S + S Q+ A G S+ S + A D
Sbjct: 4646 PLSNLSSTSSSSHTQQQSSAAQSQAGGNSGSSKKNSRQQTAASAALD 4692
Score = 45 (20.9 bits), Expect = 2.1e-54, Sum P(5) = 2.1e-54
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 1212 NSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDK 1271
NS +++ E+ + D T ++G +K L PE + +G+ + S +DK
Sbjct: 2984 NSKHDDGDEVDDDGTTTTKDSDSTKLTGGD--NKDSLLDPERPSSSGKSSSENASGGNDK 3041
Query: 1272 S 1272
+
Sbjct: 3042 T 3042
Score = 45 (20.9 bits), Expect = 1.3e-05, Sum P(5) = 1.3e-05
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 354 RIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESL 412
++GQ++D++ + V + +L V+ +T G D TS EY E +
Sbjct: 1225 QVGQQQDLMDISGNVAMGAANAVSSIPTTQLPVSEDCVTQGAGD--TSVVGMLEYSEGM 1281
Score = 44 (20.5 bits), Expect = 1.7e-54, Sum P(5) = 1.7e-54
Identities = 48/227 (21%), Positives = 80/227 (35%)
Query: 1321 EAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGF-DIPIEKGVEQSGTEIDAKVK 1379
EAF EK ++ D +++ + A E A + I+ E E K +
Sbjct: 3625 EAFNAEKAEKLAAAEK--DAATEKAAATEKAAAEKAASVKNEVIDLDDELMTNESVIKKE 3682
Query: 1380 WKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSLVKELIHRSPDHSDMVIGNV 1439
TP+ E + E PE D++E ++ + +K +P+ ++ +
Sbjct: 3683 SPVTPIKEE--IKSEE--SPEKHDTADNLEDKNSDAEESTKIKGKEDFNPETTEKEALDE 3738
Query: 1440 PGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPIL-SGSPINSGTECSTVS 1498
N ++D S P I S PS +D + E P+ +G S +CS
Sbjct: 3739 STNLNKDKSSTETLVPEIEDSK--PS-----EDKME-VEELPVAENGEKEGSPEKCSDAE 3790
Query: 1499 VKTDVGNHPQN-VEPTSASPERSGPQ---NSAVGFCDKSEIPSMEAE 1541
K P + P E + N+ SE P E E
Sbjct: 3791 DKKFSEEKPSSPAVPDGKVSEMEADEAAPNTEENCSGDSESPEKECE 3837
Score = 43 (20.2 bits), Expect = 2.1e-54, Sum P(5) = 2.1e-54
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 1883 EKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLE-DSKGSIG 1925
E S+E G L S ++EK D + +K + + E D+ ++G
Sbjct: 2642 ENSDEEGGIGLRSRRRKEKRDRAREKKGNDEYIPRERDALAALG 2685
Score = 42 (19.8 bits), Expect = 1.8e-56, Sum P(5) = 1.8e-56
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1311 PVSSEAPASTEAFEQEKVTNTSSFVNLAD 1339
P+SS A S+E E+ + + + N AD
Sbjct: 5358 PISSGASTSSERSERSESRISLTITNAAD 5386
Score = 42 (19.8 bits), Expect = 6.5e-56, Sum P(6) = 6.5e-56
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 1481 PILSGSPINSGTECSTVSVKTDVGNHPQNVE 1511
P LSG+P +SG ++ S ++ + NV+
Sbjct: 5037 PPLSGTPSSSGGGNTSTSKRSSQAANEANVQ 5067
Score = 42 (19.8 bits), Expect = 9.1e-55, Sum P(3) = 9.1e-55
Identities = 42/192 (21%), Positives = 73/192 (38%)
Query: 846 RRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQ 905
R G + S P + ++A + K L N SGG S S S A + L+ + Q
Sbjct: 5298 RGGSSSSSSSTP-APMTA-EQDKVTLTPLNASGGGSGSSSSS-----AAAAGLAANLPSQ 5350
Query: 906 PCGVATSADVAGPDQKPAE-QSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNV 964
T+ +A P A S R +S I+L T+ + + P D +
Sbjct: 5351 -----TTITIAPPISSGASTSSERSERSESRISLTITNAADA---AKLPPPYEEADELII 5402
Query: 965 ASDTKEVLSEN-SSSKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSI 1023
K+ + N SS GG + L + + ++ S A A+ ++ + + +
Sbjct: 5403 QPILKKPTAANPGSSHGGSVDDLDTAENTSAANLSGSSSSSAAAAAAAAAEENRRSSNRL 5462
Query: 1024 TEPYTGSTNTEG 1035
P +G+ G
Sbjct: 5463 KRPRSGNEQGSG 5474
Score = 41 (19.5 bits), Expect = 2.2e-54, Sum P(2) = 2.2e-54
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 2353 LAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFE 2386
L +EE NE SD+E G + KE +A E
Sbjct: 2634 LNSEESSNENSDEEG-GIGLRSRRRKEKRDRARE 2666
Score = 41 (19.5 bits), Expect = 7.4e-53, Sum P(5) = 7.4e-53
Identities = 24/102 (23%), Positives = 36/102 (35%)
Query: 699 PSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPS 758
PS+P P G+ +++ E P S D SP K E E +
Sbjct: 3799 PSSPAVPDGKVSEMEADEAAPNTEEN--------CSGDSESP---EKECEDKVVEKVEEE 3847
Query: 759 GGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTI-DPSSAV 799
GE++ T + S S +S T+ +P AV
Sbjct: 3848 KGENSYEKAEEQKEETEKLEKSSIESEPSEKSETVLEPEVAV 3889
Score = 41 (19.5 bits), Expect = 0.00038, Sum P(7) = 0.00038
Identities = 16/68 (23%), Positives = 28/68 (41%)
Query: 681 PTTAFVP-VAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPS 739
PT + P ++P S P Q + + + Q +QV + + + +PS
Sbjct: 413 PTMSPHPQMSPRPVGVSPAKPPPPQQQQQQTQAQQPQQVVSNQPSQHSI---QGMVGLPS 469
Query: 740 PGPDPKTN 747
P P P T+
Sbjct: 470 PRPQPPTS 477
Score = 40 (19.1 bits), Expect = 3.0e-56, Sum P(5) = 3.0e-56
Identities = 24/94 (25%), Positives = 38/94 (40%)
Query: 2276 QTVPQDLGLPLS-SSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEG 2334
+T P +G P+ SS + + + K S S V D S P + S A+
Sbjct: 4225 KTPPPSMGAPMDLSSSLPKMNMTEMLKSASSSGAIDLSEVQ-DFSM-PSKKSSVHAALSS 4282
Query: 2335 GGVVSIPVPEEADGPASFLAAEEEKNECSDKEPV 2368
S+ + D + L +KN C+ +EPV
Sbjct: 4283 A-FPSMGNKSKLDDTLNKLM---KKNNCTIEEPV 4312
Score = 40 (19.1 bits), Expect = 1.7e-55, Sum P(6) = 1.7e-55
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 1218 PGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQA 1257
P G K++ G TP G S + P +K+ A
Sbjct: 2784 PRGRNGGKSNKESTGVSTPAPGSASGSNSGNTTPAHKSSA 2823
Score = 39 (18.8 bits), Expect = 1.6e-58, Sum P(5) = 1.6e-58
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 1285 GFDIPIEKHNEQSRNQNNPEVKG 1307
G + +E ++E+S N+N+ E G
Sbjct: 2627 GHEDVMELNSEESSNENSDEEGG 2649
Score = 39 (18.8 bits), Expect = 3.7e-56, Sum P(5) = 3.7e-56
Identities = 18/87 (20%), Positives = 33/87 (37%)
Query: 2251 PRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESI 2310
P G+ D G GN R++ Q SSS + +K + + +++
Sbjct: 4501 PLGDQLSIDYVGGGGASGSGSGNSRRSNRQQGNSQQSSSAAQLQKQQQQQQQQQQQQQQH 4560
Query: 2311 ASAVPLD-ESKGPDAEVSSQTAIEGGG 2336
+ P + + P ++ QT GG
Sbjct: 4561 SMPGPQNLTGEEPVPVINKQTGKRLGG 4587
Score = 39 (18.8 bits), Expect = 5.1e-55, Sum P(5) = 5.1e-55
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 1949 SSLAPWEAKIDGSSEKDPVSSQSVLEGS 1976
S+ AP A S P S L+GS
Sbjct: 2800 STPAPGSASGSNSGNTTPAHKSSALDGS 2827
Score = 39 (18.8 bits), Expect = 3.0e-53, Sum P(4) = 3.0e-53
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 399 NTSAEDRREYLESLLR 414
N A++++++LESL R
Sbjct: 5065 NVQAKEQQKWLESLAR 5080
Score = 39 (18.8 bits), Expect = 3.0e-53, Sum P(4) = 3.0e-53
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 671 VMVGIAPSSQPTTAFVPVAPGSQSASACPSTPMQPKG-RGRRIQSGEQVP 719
+++G++ + + T P P S+ PS + P + Q Q P
Sbjct: 4325 IVLGLSAAKEQKTFPDPSLPSSKKPQIPPSVSVTPANLQSSSNQQSNQKP 4374
Score = 39 (18.8 bits), Expect = 4.9e-05, Sum P(5) = 4.9e-05
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 388 NQSITAGFFDNNTSAED 404
N + G FDNN+ + +
Sbjct: 913 NAGVDVGLFDNNSMSSN 929
Score = 38 (18.4 bits), Expect = 5.2e-60, Sum P(4) = 5.2e-60
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 2009 PEEKTEGSEKDPDSSFAAQE---DPKESVVEAGDQMGVSLGGATVMEKSSEDLAT 2060
P K S D + + D +ESV + ++ AT M S +DL T
Sbjct: 3202 PSSKAANSNNTTDHANSNSHLGLDEEESVAGSYPPTVAAVEDATTMWPSMQDLNT 3256
Score = 38 (18.4 bits), Expect = 2.2e-05, Sum P(7) = 2.2e-05
Identities = 17/93 (18%), Positives = 34/93 (36%)
Query: 465 GLGTDGEPLPPLPSRLVTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKG-EHLGALDTQH 523
GLG G P PS+ + A + M Y + G ++ G+L Q
Sbjct: 117 GLGAYGHPQAAPPSQQQRQSNASAYRQHMPAYGQQDQQKLASYGAQQSMMAGYGSLAPQQ 176
Query: 524 YGRGKRAREVRSYEEQWTEEEFEKMCQAESSDS 556
+ + + + Q +++ ++ Q + S
Sbjct: 177 QQQQQPPTPQQQQQAQQVQQQAQQQQQQQQQQS 209
Score = 37 (18.1 bits), Expect = 2.4e-53, Sum P(6) = 2.4e-53
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1399 PENKTDGDSVEKLEDTVDDHSLVK 1422
PE + + VEK+E+ ++S K
Sbjct: 3832 PEKECEDKVVEKVEEEKGENSYEK 3855
Score = 37 (18.1 bits), Expect = 3.1e-52, Sum P(6) = 3.1e-52
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 1730 SDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALLSSSKDIIAESAKADV 1780
S+ NME + G GR M+ P++ S S+ + +K V
Sbjct: 4171 SEIANMEALSGSSGRGRGGNSSASSGMQPPPAHQHASLSRQSSGQFSKPAV 4221
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 650 (233.9 bits), Expect = 5.3e-60, Sum P(3) = 5.3e-60
Identities = 154/386 (39%), Positives = 214/386 (55%)
Query: 32 YLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXX 91
Y M ++ K W Y++IDE HRIKN KL+ + +++++RLLLTGTP
Sbjct: 250 YEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQNNLHE 309
Query: 92 XXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFV 151
+FNS+ DF WF+ GD ++ RLH VLRPF+
Sbjct: 310 LWSLLNFLLPDVFNSASDFDSWFDT--NCLGDQK-------------LVERLHAVLRPFL 354
Query: 152 LRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVEENLGSIGNSKGRSVHNSVM 206
LRR+K +VE LP K E L + + Y ++LMK ++ L S G + N +M
Sbjct: 355 LRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDI-LNSAGKMDKMRLLNILM 413
Query: 207 ELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFST 266
+LR CNHPYL AE +L ++ GK+ LD+LLPK++ RVL FS
Sbjct: 414 QLRKCCNHPYLFD-GAEPGPPYTTDTHL--VIN-SGKMVALDKLLPKVQEQGSRVLIFSQ 469
Query: 267 MTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVN 326
MTR+LD++EDY ++ + Y RLDG+T R ID FN +S FIF+LS RAGG+G+N
Sbjct: 470 MTRVLDILEDYCMWRGFEYCRLDGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGIN 529
Query: 327 LQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 386
L AD VI++D+DWNPQVDLQA RAHRIGQ++ V V R T TVEE++ AE KL +
Sbjct: 530 LATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFRLITDNTVEERIVERAEMKLRL 589
Query: 387 ANQSITAGFFDNNTSAEDRREYLESL 412
+ I G + + + E L+ +
Sbjct: 590 DSIVIQQGRLIDQQNKLGKDEMLQMI 615
Score = 52 (23.4 bits), Expect = 5.3e-60, Sum P(3) = 5.3e-60
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 6 CVMAVLLYSREKIVHQKFNV-LLTTYEYLMNKHDRPKLSKI 45
CV + + REK V +KFN L E K+++ KLS+I
Sbjct: 246 CVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 286
Score = 50 (22.7 bits), Expect = 5.3e-60, Sum P(3) = 5.3e-60
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P S +EE+ + + EP+ S + E KE
Sbjct: 781 IGYKVPRSPDIPNSAQVQKEEQRKIDEAEPL--SPEETEEKE 820
Score = 45 (20.9 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 1301 NNPEVKGEETPVSSEA-PASTEAFEQEKVTNTSSFVN 1336
N+ +V+ EE EA P S E E+++ T F N
Sbjct: 793 NSAQVQKEEQRKIDEAEPLSPEETEEKEKLLTQGFTN 829
Score = 37 (18.1 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 537 EEQWTEEEFEKMCQAESSDSPKLKEEG 563
EEQ +E E + E+ + KL +G
Sbjct: 800 EEQRKIDEAEPLSPEETEEKEKLLTQG 826
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 656 (236.0 bits), Expect = 8.8e-60, Sum P(5) = 8.8e-60
Identities = 159/410 (38%), Positives = 224/410 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 1026 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 1083
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1084 GTPLQNTVEELFSLLHFLEPTRFPSETTFMQEF-------GDLKTEEQ----------VQ 1126
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 1127 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQA 1186
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTL---IPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ +T P L +++ GKL ++D
Sbjct: 1187 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLID 1246
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1247 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1306
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1307 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1366
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
+ E ++ A KLG+ QS++ N + ++ +E LLR+
Sbjct: 1367 RNSYEREMFDKASLKLGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLRK 1416
Score = 87 (35.7 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 47/183 (25%), Positives = 71/183 (38%)
Query: 2210 RGDGIVPETVPEELGLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAE 2269
RG G P P LG +P A + R S+ P+ + +AE
Sbjct: 2085 RGAGGAPALNPLALGFGQTPAATPAAPGQEDKAGAAEAKA--REASEKPEGKEEE--EAE 2140
Query: 2270 GGG-NMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSS 2328
G G + RQ +LG S E ++ K + SEK S +E K D + S
Sbjct: 2141 GSGKDQRQDREAELGAGKSEPRGVEVGVDSGPKSI-SEKGSEED----EEEKLEDDDKSE 2195
Query: 2329 QTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
+++ G VS + + AS A +E + E SV+Q+ + A +F P
Sbjct: 2196 ESSQPEAGAVSRGKNFDEESNASMSTARDETRDGFYMEDGDPSVAQLLHERTFAFSFWPK 2255
Query: 2389 DVV 2391
D V
Sbjct: 2256 DRV 2258
Score = 72 (30.4 bits), Expect = 8.8e-60, Sum P(5) = 8.8e-60
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 2335 GGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGA 2394
GG+++ P+ A PA+ + ++ S E G + ESK+PE K+ E D A
Sbjct: 2756 GGLLNAPLSAAAGSPAATAGPTDPEDGASRAEEKGGE-HEDESKDPE-KSTEAAPGPDSA 2813
Query: 2395 VALENTSEGMGG-PSPPL 2411
+ G G PS PL
Sbjct: 2814 NGSVGAATGPAGLPSNPL 2831
Score = 63 (27.2 bits), Expect = 8.8e-60, Sum P(5) = 8.8e-60
Identities = 39/137 (28%), Positives = 60/137 (43%)
Query: 1792 PGADNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQ----- 1846
PG ++ G E K+ EK + E S Q + EAE+G EP+
Sbjct: 2111 PGQEDKAGAA---EAKAREASEKPEGKEEEEAEGSGKDQRQDREAELGAGKSEPRGVEVG 2167
Query: 1847 VDGFSPRSMS--GVVDELVD--EAGDHMGVSHSP-VHVVEREKS-EELGLPSLSSATKEE 1900
VD P+S+S G ++ + E D S P V R K+ +E S+S+A ++E
Sbjct: 2168 VDS-GPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTA-RDE 2225
Query: 1901 KIDGSLDKDPDSNLVVL 1917
DG +D D ++ L
Sbjct: 2226 TRDGFYMEDGDPSVAQL 2242
Score = 61 (26.5 bits), Expect = 2.9e-59, Sum P(5) = 2.9e-59
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 2343 PEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALEN 2399
P++A+G A+F E+E E SD E ++ E E E +D +DG +EN
Sbjct: 2882 PDKAEG-AAF--QEDEPLEGSDAEESLDKTAESSVLEDEIAQGEELDSLDGGDEIEN 2935
Score = 61 (26.5 bits), Expect = 6.8e-57, Sum P(5) = 6.8e-57
Identities = 25/88 (28%), Positives = 39/88 (44%)
Query: 2354 AAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVI 2413
AAE + E S+K P G + E + + ++ GA E +G S P I
Sbjct: 2119 AAEAKAREASEK-PEGKEEEEAEGSGKDQRQDREAEL--GAGKSEPRGVEVGVDSGPKSI 2175
Query: 2414 AEDKTENEIEEDPVVNSVAVEESKGSEA 2441
+E +E + EE+ + + EES EA
Sbjct: 2176 SEKGSEED-EEEKLEDDDKSEESSQPEA 2202
Score = 60 (26.2 bits), Expect = 2.9e-59, Sum P(5) = 2.9e-59
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 2010 EEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSED 2057
EE+ EGS KD A+ +S G ++GV G ++ EK SE+
Sbjct: 2136 EEEAEGSGKDQRQDREAELGAGKSEPR-GVEVGVDSGPKSISEKGSEE 2182
Score = 59 (25.8 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 2144 VTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEP 2203
V + D+K AE +L GG E +E+E E + P +D+ + P +
Sbjct: 1771 VGMPDAKAIAAEQRGT-DMLADGGDGGEFDREDEDPEYKPTRTPFKDEIDEFANSPPEDK 1829
Query: 2204 CVQMDVRGDG 2213
M++R G
Sbjct: 1830 EEPMEIRAPG 1839
Score = 54 (24.1 bits), Expect = 8.8e-60, Sum P(5) = 8.8e-60
Identities = 18/48 (37%), Positives = 21/48 (43%)
Query: 1250 KPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQS 1297
KP I+ ANS P+DK PM E PG KH+E S
Sbjct: 1808 KPTRTPFKDEIDEFANSPPEDKEEPM----EIRAPG------KHSEGS 1845
Score = 53 (23.7 bits), Expect = 9.9e-59, Sum P(4) = 9.9e-59
Identities = 18/77 (23%), Positives = 33/77 (42%)
Query: 1981 AEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ 2040
A AG Q + +K P+ + + +E EGS+ + A+ E + G++
Sbjct: 2866 ALAGLQGAVGAGEDKAPDKAE--GAAFQEDEPLEGSDAEESLDKTAESSVLEDEIAQGEE 2923
Query: 2041 MGVSLGGATVMEKSSED 2057
+ SL G +E + D
Sbjct: 2924 LD-SLDGGDEIENNEND 2939
Score = 52 (23.4 bits), Expect = 2.9e-59, Sum P(5) = 2.9e-59
Identities = 19/66 (28%), Positives = 27/66 (40%)
Query: 2167 GVVAETVQEEEKTELSCEKQPIGSSVDDESKGPE--VEPCVQMDVRGDGIVPETVPEELG 2224
G A T + + + + G +DESK PE E D + T P G
Sbjct: 2768 GSPAATAGPTDPEDGASRAEEKGGEHEDESKDPEKSTEAAPGPDSANGSVGAATGPA--G 2825
Query: 2225 LPSSPM 2230
LPS+P+
Sbjct: 2826 LPSNPL 2831
Score = 50 (22.7 bits), Expect = 3.1e-58, Sum P(5) = 3.1e-58
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 1955 EAKIDGSSEKDPVSSQSVLEGS-----KETVAEAG----DQMDISIMPEKLPEHLDIPAS 2005
EAK +SEK + EGS ++ AE G + + + + P+ + S
Sbjct: 2121 EAKAREASEKPEGKEEEEAEGSGKDQRQDREAELGAGKSEPRGVEVGVDSGPKSISEKGS 2180
Query: 2006 LATPEEKTEGSEKDPDSS 2023
EEK E +K +SS
Sbjct: 2181 EEDEEEKLEDDDKSEESS 2198
Score = 49 (22.3 bits), Expect = 2.6e-58, Sum P(4) = 2.6e-58
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 1905 SLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSD 1943
SLDK +S+ VLED G+++D G + N +D
Sbjct: 2904 SLDKTAESS--VLEDEIAQ-GEELDSLDGGDEIENNEND 2939
Score = 48 (22.0 bits), Expect = 9.3e-57, Sum P(4) = 9.3e-57
Identities = 26/84 (30%), Positives = 35/84 (41%)
Query: 732 AASDDIPSPGP-DPKTNEQPQSESLNPSGGE-STATDGNVSSIPTAPVPDSVSPS--AVK 787
AA + GP DP+ E GGE + S AP PDS + S A
Sbjct: 2766 AAGSPAATAGPTDPEDGASRAEEK----GGEHEDESKDPEKSTEAAPGPDSANGSVGAAT 2821
Query: 788 GQSGTIDPSSAVAALNSELNTNLA 811
G +G PS+ +A N L + +A
Sbjct: 2822 GPAGL--PSNPLA-FNPFLLSTMA 2842
Score = 44 (20.5 bits), Expect = 9.5e-59, Sum P(5) = 9.5e-59
Identities = 20/70 (28%), Positives = 32/70 (45%)
Query: 2003 PASLATPEEKTEGSEKDPDSSFAAQE---DPKESVVEA-G-DQMGVSLGGAT-VMEKSSE 2056
PA+ A P + +G+ + + ++ DP++S A G D S+G AT S
Sbjct: 2770 PAATAGPTDPEDGASRAEEKGGEHEDESKDPEKSTEAAPGPDSANGSVGAATGPAGLPSN 2829
Query: 2057 DLATPPLSLA 2066
LA P L+
Sbjct: 2830 PLAFNPFLLS 2839
Score = 43 (20.2 bits), Expect = 8.8e-60, Sum P(5) = 8.8e-60
Identities = 17/68 (25%), Positives = 31/68 (45%)
Query: 1992 MPEKLPEHLDIP-ASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATV 2050
MP +P++ D+ +S P++K ++P+ +E V + G +GGA
Sbjct: 2548 MPSYVPKNADVLFSSFQKPKQKRHRC-RNPNKLDINTLTGEERVPVVNKRNGKKMGGA-- 2604
Query: 2051 MEKSSEDL 2058
M +DL
Sbjct: 2605 MAPPMKDL 2612
Score = 43 (20.2 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 1777 KADVVLDEHGKVQLLPGADNPEGGVIVPE 1805
+ +V+ D+ K+ L GAD+ E + +PE
Sbjct: 1699 RQEVIGDQAEKI--LEGADSSEADLWIPE 1725
Score = 43 (20.2 bits), Expect = 2.2e-56, Sum P(5) = 2.2e-56
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 754 SLNPSGGEST-ATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNL 810
SL+ E T A + ++ + PT +P SP G +DP + + +N E T L
Sbjct: 2476 SLSTEDAEVTKAFEEDIETPPTRNIP---SP-------GHLDPDTRIPVINLEDGTRL 2523
Score = 42 (19.8 bits), Expect = 9.3e-57, Sum P(4) = 9.3e-57
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 716 EQVP---RRRGKKIGLVLPAASDDIP 738
E+VP +R GKK+G + D+P
Sbjct: 2588 ERVPVVNKRNGKKMGGAMAPPMKDLP 2613
Score = 42 (19.8 bits), Expect = 7.3e-54, Sum P(8) = 7.3e-54
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 855 SPPISDVSAGPESKSNLQSENN---SGGLRLSKSVSMGKQDALS 895
+PP +D S + L + SG L+ S + K DAL+
Sbjct: 2293 TPPTADSPLQKRSLAELSAVGQASISGSEELTASPQLSKDDALN 2336
Score = 42 (19.8 bits), Expect = 7.3e-54, Sum P(8) = 7.3e-54
Identities = 13/57 (22%), Positives = 19/57 (33%)
Query: 1159 KAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVTPTVETPPPGFNSPN 1215
K + G EG D E A+ + ++ PT P PG P+
Sbjct: 2453 KRRRGRRKNVEGLDLLFMSHKRTSLSTEDAEVTKAFEEDIETPPTRNIPSPGHLDPD 2509
Score = 41 (19.5 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1296 QSRNQNNPEVKGEETPVSSEAPASTEAFEQEK 1327
+S ++ P K P S+ A +E F EK
Sbjct: 1530 ESDSEEKPCTKPRRPPDRSQGYARSECFRVEK 1561
Score = 41 (19.5 bits), Expect = 3.6e-56, Sum P(5) = 3.6e-56
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 846 RRGKRQALGSPPISDVSAGPESKSNLQSEN-NS--GGLRLSKSVSMGKQDALSQELSNKI 902
RRG+R + +A S S + NS G+ L+ ++ Q S +L+ +
Sbjct: 2659 RRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNL--QSLQSLQLAGLM 2716
Query: 903 QVQPCGVATSADVAGPDQKPA 923
P G+AT+A G + PA
Sbjct: 2717 GFPP-GLATAAAAGGDAKNPA 2736
Score = 39 (18.8 bits), Expect = 3.1e-58, Sum P(5) = 3.1e-58
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 2163 LRGGGVVAETVQEEEKTELSCEKQPIGSSVDDES 2196
LRG VV+E QE+ +LS + SS + S
Sbjct: 2370 LRGSQVVSENGQEKV-VDLSKASREAASSTSNFS 2402
Score = 39 (18.8 bits), Expect = 5.7e-56, Sum P(6) = 5.7e-56
Identities = 26/91 (28%), Positives = 34/91 (37%)
Query: 1517 PERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDAIVNNLLETPL----DIKSIGG--PIVS 1570
P G S G KSEI A A S + +N LL L D+ S+ + S
Sbjct: 2650 PVVRGEGASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQSLQS 2709
Query: 1571 MKAADVADADHPLETAVELGSPV-NSCTVEP 1600
++ A + L TA G N V P
Sbjct: 2710 LQLAGLMGFPPGLATAAAAGGDAKNPAAVLP 2740
Score = 38 (18.4 bits), Expect = 5.7e-56, Sum P(6) = 5.7e-56
Identities = 13/62 (20%), Positives = 29/62 (46%)
Query: 1317 PASTEAFEQEKVTNTSSFVNLADLS-SDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEID 1375
P + ++ + S+ V A +S S++ T S + + A +P ++ + EI+
Sbjct: 2295 PTADSPLQKRSLAELSA-VGQASISGSEELTASPQLSKDDALNLSVPRQRRRRRRKIEIE 2353
Query: 1376 AK 1377
A+
Sbjct: 2354 AE 2355
Score = 38 (18.4 bits), Expect = 2.2e-55, Sum P(7) = 2.2e-55
Identities = 22/92 (23%), Positives = 34/92 (36%)
Query: 1773 AESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDK 1832
AE + D D + +L G P G + + +++ EK E ++
Sbjct: 2139 AEGSGKDQRQDR--EAELGAGKSEPRGVEVGVDSGPKSISEKGSEEDEEEKLEDDDKSEE 2196
Query: 1833 ASEAEIGDRIDEPQVDGFSPRSMSGVVDELVD 1864
+S+ E G D S SMS DE D
Sbjct: 2197 SSQPEAGAVSRGKNFDEESNASMSTARDETRD 2228
Score = 38 (18.4 bits), Expect = 7.3e-54, Sum P(8) = 7.3e-54
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 707 GRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATD 766
G G+ G +V G K + D+ D K+ E Q E+ S G++ +
Sbjct: 2155 GAGKSEPRGVEVGVDSGPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEE 2214
Query: 767 GNVSSIPTA 775
N +S+ TA
Sbjct: 2215 SN-ASMSTA 2222
Score = 37 (18.1 bits), Expect = 3.3e-57, Sum P(6) = 3.3e-57
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 1295 EQSRNQNNPEVKGEETPVSSE 1315
E R +PE K TP E
Sbjct: 1797 EFDREDEDPEYKPTRTPFKDE 1817
Score = 37 (18.1 bits), Expect = 2.2e-55, Sum P(7) = 2.2e-55
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1904 GSLDKDPDSNLVVLEDSKGSIGDQ 1927
G LD D ++ LED +G++
Sbjct: 2504 GHLDPDTRIPVINLEDGTRLVGEE 2527
Score = 37 (18.1 bits), Expect = 2.8e-55, Sum P(7) = 2.8e-55
Identities = 8/36 (22%), Positives = 15/36 (41%)
Query: 1309 ETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDD 1344
++P+ + A A Q ++ + LS DD
Sbjct: 2298 DSPLQKRSLAELSAVGQASISGSEELTASPQLSKDD 2333
Score = 37 (18.1 bits), Expect = 2.8e-55, Sum P(7) = 2.8e-55
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 1488 INSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAV 1527
++SG + ++S K + + +E S E S P+ AV
Sbjct: 2168 VDSGPK--SISEKGSEEDEEEKLEDDDKSEESSQPEAGAV 2205
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 659 (237.0 bits), Expect = 9.5e-60, Sum P(2) = 9.5e-60
Identities = 162/418 (38%), Positives = 231/418 (55%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 253 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 310
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+S++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 311 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 362
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K VE LP K E L + + Y K+LMK ++
Sbjct: 363 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 416
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L S G + N +M+LR CNHPYL AE + IV GK+ L
Sbjct: 417 V-LNSSGKMDKMRLLNILMQLRKCCNHPYLFD-GAEPGPPYTTDEH---IVSNSGKMVAL 471
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL------- 300
D+LL ++K RVL FS MTRLLD++EDY ++ Y Y RLDG T +R L
Sbjct: 472 DKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEERENLFLHKHNL 531
Query: 301 -----IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRI 355
I+ FN +S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRI
Sbjct: 532 FSTEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 591
Query: 356 GQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
GQK+ V V R T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 592 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMI 649
Score = 42 (19.8 bits), Expect = 9.5e-60, Sum P(2) = 9.5e-60
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 1884 KSEELGLPSLSSATKEEKIDGSLDKDPDSN 1913
++ EL P+++ +++KIDG+ P +
Sbjct: 797 RNPELPNPAIAQREEQKKIDGAEPLTPQES 826
Score = 42 (19.8 bits), Expect = 9.5e-60, Sum P(2) = 9.5e-60
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESK 2378
+ VP + P +A EE+ + EP+ S+ + K
Sbjct: 791 IGYKVPRNPELPNPAIAQREEQKKIDGAEPLTPQESEEKDK 831
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 657 (236.3 bits), Expect = 9.7e-60, Sum P(5) = 9.7e-60
Identities = 158/410 (38%), Positives = 223/410 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 1066 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 1123
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1124 GTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF-------GDLKTEEQ----------VQ 1166
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 1167 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQA 1226
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ + P L +++ GKL ++D
Sbjct: 1227 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLID 1286
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1287 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1346
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1347 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1406
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
+ E ++ A KLG+ QS++ N + ++ +E LLR+
Sbjct: 1407 RNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRK 1456
Score = 81 (33.6 bits), Expect = 9.7e-60, Sum P(5) = 9.7e-60
Identities = 40/182 (21%), Positives = 69/182 (37%)
Query: 2210 RGDGIVPETVPEELGLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAE 2269
RG VP +G +P V+ + E ++ + E
Sbjct: 2125 RGASTVPPLNTLAMGFGQTPPVISSAHVHEEKAMEQAEGKAEECEHSPAKERSDGKEEEE 2184
Query: 2270 GGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQ 2329
G + Q+ + SS E + +EG + P GS+ S + +E K D + S +
Sbjct: 2185 EAGGAKDG-KQECEVEASSVKGELKGVEGSADP-GSKSVSEKGSEEDEEEKLEDDDKSEE 2242
Query: 2330 TAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMD 2389
++ G VS + + AS A +E + E +SV+Q+ + A +F P D
Sbjct: 2243 SSQPEAGAVSRGKTFDEESNASLSTARDETRDGFYMEDGDASVAQLLHERTFAFSFWPKD 2302
Query: 2390 VV 2391
V
Sbjct: 2303 RV 2304
Score = 59 (25.8 bits), Expect = 9.7e-60, Sum P(5) = 9.7e-60
Identities = 22/81 (27%), Positives = 34/81 (41%)
Query: 2144 VTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEP 2203
V + D+K AE +L GG E +E+E E + P +D+ + P +
Sbjct: 1811 VGMPDAKAIAAEQRGT-DMLADGGDGGEFDREDEDPEYKPTRAPFKDEIDEFANSPAEDK 1869
Query: 2204 CVQMDVRGDGIVPETVPEELG 2224
M+V G E+ ELG
Sbjct: 1870 EESMEVHSSGKHSES-NAELG 1889
Score = 58 (25.5 bits), Expect = 2.1e-55, Sum P(6) = 2.1e-55
Identities = 52/240 (21%), Positives = 86/240 (35%)
Query: 1682 ALDKTE-IATSCDTASLDDSHDNGNVEVLCGGTGDKKADCKMEPDCLVAS-DSVNMELVP 1739
A+++ E A C+ + + D E GG D K +C++E + V P
Sbjct: 2157 AMEQAEGKAEECEHSPAKERSDGKEEEEEAGGAKDGKQECEVEASSVKGELKGVEGSADP 2216
Query: 1740 RDFGVGRRDGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEG 1799
V + + + + SS + A + DE L D
Sbjct: 2217 GSKSVSEKGSEEDEEEKLEDDDKSEESSQPE--AGAVSRGKTFDEESNASLSTARDETRD 2274
Query: 1800 GVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVV 1859
G + E ++ + + E F S +D+ + D I E + G P +
Sbjct: 2275 GFYM-EDGDASVAQ---LLHERTFAFSFWPKDRVMINRL-DNICEAVLKGKWPVNRR--- 2326
Query: 1860 DELVDEAGDHMGVSHSPVHVVEREKS-EELGLPSLSSATKEEKIDGS--LDKDPDSNLVV 1916
++ D G G S V +++S EL + S +S + E I S L KD NL V
Sbjct: 2327 -QMFDFQGLVPGYPPSAVDSPLQKRSFAELSMVSQASISASEDITTSPQLSKDDALNLSV 2385
Score = 55 (24.4 bits), Expect = 6.4e-56, Sum P(5) = 6.4e-56
Identities = 44/192 (22%), Positives = 69/192 (35%)
Query: 2224 GLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLG 2283
GL ++P+ + E KG D E N D+E TV
Sbjct: 2803 GLLNNPLSAATGNTTTASSQGEPEDGTSKAEEKGNDNEDENR-DSE---KSTDTV----- 2853
Query: 2284 LPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIP-V 2342
S++D + + P +A L + P S G G +++P
Sbjct: 2854 ---SAADSANGSVGAATAPAALPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGF 2910
Query: 2343 P-----EEADGPASFLAAEE-EKNECSDKEPV-GSSVSQ-----IESK--EPEAKAFEPM 2388
P + A G + AA++ E C D E + GS + +ES E E E +
Sbjct: 2911 PALAGLQNAVGTSEEKAADKAEGGPCKDGETLEGSDAEENLDKTVESSILEDEVAQGEEL 2970
Query: 2389 DVVDGAVALENT 2400
D ++G +ENT
Sbjct: 2971 DSLEGGDEIENT 2982
Score = 54 (24.1 bits), Expect = 1.3e-55, Sum P(6) = 1.3e-55
Identities = 31/135 (22%), Positives = 50/135 (37%)
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQ 891
GQ+ S + QA G + S E + E +GG +K GKQ
Sbjct: 2141 GQTPPVISSAHVHEEKAMEQAEGKAEECEHSPAKERSDGKEEEEEAGG---AKD---GKQ 2194
Query: 892 DALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGS 951
+ + S K +++ GV SAD P K + + + + SSQP
Sbjct: 2195 ECEVEASSVKGELK--GVEGSAD---PGSKSVSEKGSEEDEEEKLEDDDKSEESSQPEAG 2249
Query: 952 TPAQVPSMDLGNVAS 966
++ + D + AS
Sbjct: 2250 AVSRGKTFDEESNAS 2264
Score = 52 (23.4 bits), Expect = 4.2e-55, Sum P(6) = 4.2e-55
Identities = 17/67 (25%), Positives = 34/67 (50%)
Query: 2010 EEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANEE 2069
+E+++G E++ ++ A++ +E VEA G G + S+ ++ S +EE
Sbjct: 2174 KERSDGKEEEEEAG-GAKDGKQECEVEASSVKGELKGVEGSADPGSKSVSEKG-SEEDEE 2231
Query: 2070 EMIEGFD 2076
E +E D
Sbjct: 2232 EKLEDDD 2238
Score = 51 (23.0 bits), Expect = 6.3e-54, Sum P(7) = 6.3e-54
Identities = 27/118 (22%), Positives = 42/118 (35%)
Query: 1266 SSPDDKSLPMVPNLETAPPGFDI--PI--EKHNEQSRNQNNPEVKGEETPVSSEAPASTE 1321
S ++ VP L T GF P+ H + + E K EE S S
Sbjct: 2120 SFAQNRGASTVPPLNTLAMGFGQTPPVISSAHVHEEKAMEQAEGKAEECEHSPAKERSDG 2179
Query: 1322 AFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVK 1379
E+E+ ++ + SV ++ G P K V + G+E D + K
Sbjct: 2180 KEEEEEAGGAKDGKQECEVEAS----SVKGELKGVEGSADPGSKSVSEKGSEEDEEEK 2233
Score = 50 (22.7 bits), Expect = 6.4e-56, Sum P(5) = 6.4e-56
Identities = 27/115 (23%), Positives = 49/115 (42%)
Query: 700 STPMQPKGRGRRIQ-SGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPS 758
S P Q + R R+++ E+ +RR + +V + S N Q + L+ +
Sbjct: 2384 SVPRQRRRRRRKVEIEAERAAKRRNL-MEMVAQLRESQVVSE------NGQEKVVDLSKA 2436
Query: 759 GGESTATDGNVSSIPTAPVPDSVS-P--SAVKGQSGTIDPSSAVAALNSELNTNL 810
E+T++ N SS+ + + +VS P A K Q + + LN +L
Sbjct: 2437 SREATSSTSNFSSLTSKFILPNVSTPVSDAFKSQMELLQAGLSRTPTRHMLNGSL 2491
Score = 47 (21.6 bits), Expect = 2.8e-54, Sum P(6) = 2.8e-54
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 2000 LDIPASLATPEEKTEGSEKDP-DSSFAAQEDPKESVVEAGD-QMGVSLGGATVMEKSSED 2057
L+ P S AT T S+ +P D + A+E ++ E D + A S
Sbjct: 2805 LNNPLSAATGNTTTASSQGEPEDGTSKAEEKGNDNEDENRDSEKSTDTVSAADSANGSVG 2864
Query: 2058 LATPPLSL 2065
AT P +L
Sbjct: 2865 AATAPAAL 2872
Score = 47 (21.6 bits), Expect = 2.8e-54, Sum P(6) = 2.8e-54
Identities = 43/176 (24%), Positives = 67/176 (38%)
Query: 1889 GLPSLSSATKEEKIDGSLDKDPDS----NLVVLEDS-KGSIGDQMDCCQSGVVVPENLSD 1943
G P ++ EEK + + D++ DS + V DS GS+G + +P N
Sbjct: 2823 GEPEDGTSKAEEKGNDNEDENRDSEKSTDTVSAADSANGSVG----AATAPAALPSNPLA 2878
Query: 1944 FCQPS--SSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLD 2001
F P S++AP S P L G A AG Q + EK + +
Sbjct: 2879 F-NPFLLSTMAP--GLFYPSMFLPPGLGGLTLPGFP---ALAGLQNAVGTSEEKAADKAE 2932
Query: 2002 IPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSED 2057
E EGS+ + + + E V G+++ SL G +E + D
Sbjct: 2933 --GGPCKDGETLEGSDAEENLDKTVESSILEDEVAQGEELD-SLEGGDEIENTGND 2985
Score = 46 (21.3 bits), Expect = 9.7e-60, Sum P(5) = 9.7e-60
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 1777 KADVVLDEHGKVQLLPGADNPEGGVIVPE 1805
+ +V+ D+ K+ L GAD+ E V +PE
Sbjct: 1739 RQEVIGDQAEKI--LEGADSSEADVWIPE 1765
Score = 45 (20.9 bits), Expect = 9.7e-60, Sum P(5) = 9.7e-60
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R ++ S Y+ Q TE++ E +C+A
Sbjct: 1606 YGWG-RWTDILSHGRYKRQLTEQDVETICRA 1635
Score = 44 (20.5 bits), Expect = 6.4e-56, Sum P(5) = 6.4e-56
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 846 RRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQ 905
RRG+R P S+++ + + + S + L L S+ G Q L N +Q
Sbjct: 2705 RRGRR------PKSEIARAAAAAAAVASTSGINPL-LVNSLFAGMDLTSLQNLQNLQSLQ 2757
Query: 906 -------PCGVATSADVAGPDQKPA 923
P G+AT+A G + PA
Sbjct: 2758 LAGLMGFPPGLATAATAGGDAKSPA 2782
Score = 43 (20.2 bits), Expect = 8.1e-56, Sum P(5) = 8.1e-56
Identities = 20/88 (22%), Positives = 34/88 (38%)
Query: 2355 AEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPP-LVI 2413
AE + EC S + E +E + A +++ +G+ G + P
Sbjct: 2161 AEGKAEECEHSPAKERSDGKEEEEEAGGAKDGKQECEVEASSVKGELKGVEGSADPGSKS 2220
Query: 2414 AEDKTENEIEEDPVVNSVAVEESKGSEA 2441
+K E EE+ + + EES EA
Sbjct: 2221 VSEKGSEEDEEEKLEDDDKSEESSQPEA 2248
Score = 43 (20.2 bits), Expect = 1.3e-55, Sum P(6) = 1.3e-55
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 1308 EETPVSSEAPASTEAFEQE 1326
+ TP+S+E T+AFE++
Sbjct: 2519 KRTPLSAEDAEVTKAFEED 2537
Score = 43 (20.2 bits), Expect = 1.3e-55, Sum P(6) = 1.3e-55
Identities = 17/68 (25%), Positives = 31/68 (45%)
Query: 1992 MPEKLPEHLDIP-ASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATV 2050
MP +P++ D+ +S P++K ++P+ +E V + G +GGA
Sbjct: 2594 MPSYVPKNTDVLFSSFQKPKQKRHRC-RNPNKLDINTLTGEERVPVVNKRNGKKMGGA-- 2650
Query: 2051 MEKSSEDL 2058
M +DL
Sbjct: 2651 MAPPMKDL 2658
Score = 43 (20.2 bits), Expect = 3.4e-55, Sum P(5) = 3.4e-55
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 758 SGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNL 810
S ++ T I T P+ + SP G +DP + + +N E T L
Sbjct: 2524 SAEDAEVTKAFEEDIETPPIRNIPSP-------GQLDPDTRIPVINLEDGTRL 2569
Score = 42 (19.8 bits), Expect = 4.3e-55, Sum P(5) = 4.3e-55
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 716 EQVP---RRRGKKIGLVLPAASDDIP 738
E+VP +R GKK+G + D+P
Sbjct: 2634 ERVPVVNKRNGKKMGGAMAPPMKDLP 2659
Score = 40 (19.1 bits), Expect = 1.1e-54, Sum P(5) = 1.1e-54
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1562 KSIGGPIVSMKAADVADADHPLETAVE 1588
K+ GGP + + +DA+ L+ VE
Sbjct: 2930 KAEGGPCKDGETLEGSDAEENLDKTVE 2956
Score = 39 (18.8 bits), Expect = 6.3e-54, Sum P(7) = 6.3e-54
Identities = 25/108 (23%), Positives = 43/108 (39%)
Query: 1822 AFGSSL-VLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSH--SPVH 1878
AF S + +LQ S ++ VDG P + V E D + +SH +P+
Sbjct: 2466 AFKSQMELLQAGLSRTPTRHMLNGSLVDGEPPMKRRRGRRKNV-EGLDLLFMSHKRTPLS 2524
Query: 1879 VVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGD 1926
+ E ++ + + G LD D ++ LED +G+
Sbjct: 2525 AEDAEVTKAFEEDIETPPIRNIPSPGQLDPDTRIPVINLEDGTRLVGE 2572
Score = 38 (18.4 bits), Expect = 4.2e-55, Sum P(6) = 4.2e-55
Identities = 24/85 (28%), Positives = 32/85 (37%)
Query: 1517 PERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDAIVNNLLETPL----DIKSIGG--PIVS 1570
P G S G KSEI A A S + +N LL L D+ S+ + S
Sbjct: 2696 PVVRGEGASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQNLQS 2755
Query: 1571 MKAADVADADHPLETAVELGSPVNS 1595
++ A + L TA G S
Sbjct: 2756 LQLAGLMGFPPGLATAATAGGDAKS 2780
Score = 37 (18.1 bits), Expect = 1.8e-57, Sum P(5) = 1.8e-57
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 1941 LSD---FCQPSSSLAPW 1954
LSD CQPS L W
Sbjct: 2064 LSDRLKLCQPSLDLPEW 2080
Score = 37 (18.1 bits), Expect = 2.1e-55, Sum P(6) = 2.1e-55
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 1005 KACTNASKSKATLPALDSITEPYTGSTNTEGISNTIHHV 1043
+ C +K + P L S+ EP T E S T++ +
Sbjct: 2014 RVCRMPAKPEDEPPDLASLIEPIT----EERASRTLYRI 2048
Score = 37 (18.1 bits), Expect = 2.9e-53, Sum P(6) = 2.9e-53
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 1680 GIALDKTEIAT-SCDTASLDDSHDNGNVEVLCGGTG--DKKADCKMEPDCLVASDSVN 1734
G+ + AT + TAS ++G + G D+ D + D + A+DS N
Sbjct: 2803 GLLNNPLSAATGNTTTASSQGEPEDGTSKAEEKGNDNEDENRDSEKSTDTVSAADSAN 2860
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 640 (230.4 bits), Expect = 1.0e-59, Sum P(2) = 1.0e-59
Identities = 179/571 (31%), Positives = 286/571 (50%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ L I+W +++DE HR+KN K L Y+ H+LLLT
Sbjct: 854 KFHVLLTSYELITI--DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 911
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP FN+ E F + F D S + I
Sbjct: 912 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ----------IK 954
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L S G
Sbjct: 955 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGN 1014
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLCGKLEMLDRLLPKLKA 256
S+ N +M+L+ CNHPYL + A E L Y +++ GKL +L ++L KLK
Sbjct: 1015 QVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKE 1074
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L ++ Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1075 QGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLL 1134
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHRIGQ V++ RF T +VEE++
Sbjct: 1135 STRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERI 1194
Query: 377 RASAEHKLGVANQSITAGFFDN--NTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXX 434
A+ K+ + + + G + S ++ + L+ E K+E
Sbjct: 1195 TQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIH 1254
Query: 435 XRSES-------EIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT-DDDL 486
+E+ D E D Q E ++++ K+ + + + + + + ++ ++++
Sbjct: 1255 YDNEAIARLLDRNQDATEDTDVQNMNEYLSSF-KVAQYVVREEDKIEEIEREIIKQEENV 1313
Query: 487 KALYEAMKI---YDAPKTGVSPNVGV-KRKGEHLGALDTQHYGRGKRAREVRSYEEQWTE 542
Y + Y+ + ++ N+G KR + + D + ++ EE+ +
Sbjct: 1314 DPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEE--D 1371
Query: 543 EEFEKMCQAESSDSPKLKEEGLEKSLPTVVS 573
E+F++ + +L+ E +K LP +++
Sbjct: 1372 EDFDERPEGRRQSKRQLRNEK-DKPLPPLLA 1401
Score = 78 (32.5 bits), Expect = 1.0e-59, Sum P(2) = 1.0e-59
Identities = 34/138 (24%), Positives = 53/138 (38%)
Query: 1188 AKKQSSDDKTCSVTPTVE------TPPPGFNSPNEN-PGELTGTKNDASVRGDHTPVSGH 1240
+ + SS KT TP T P +P+E G T + + + + P
Sbjct: 1528 SSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKEEAENQEEKPEKNS 1587
Query: 1241 TLASK--TEALKPENKAQAG-RIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQS 1297
+ K TEA P G R+E P + +P VP PG+ E+S
Sbjct: 1588 RIGEKMETEADAPSPAPSLGERLE--PRKIPLEDEVPGVPGEMEPEPGY----RGDREKS 1641
Query: 1298 RNQNNPEVKGEETPVSSE 1315
++ P +GEE P+ +
Sbjct: 1642 ATESTPGERGEEKPLDGQ 1659
Score = 74 (31.1 bits), Expect = 2.7e-59, Sum P(2) = 2.7e-59
Identities = 41/163 (25%), Positives = 65/163 (39%)
Query: 1261 ENIANSSPDDKSLPMVPNLETAPPGFDIPIEKH---NEQSRNQNNPEVKGEETPVSSEAP 1317
E A +SP S P P G P+EK N++ + + N + GE+ ++AP
Sbjct: 1543 EASATNSPCT-SKPATPAPSEKGEGIRTPLEKEEAENQEEKPEKNSRI-GEKMETEADAP 1600
Query: 1318 ASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAK 1377
+ + + + + +D+ V ME PG+ EK S TE
Sbjct: 1601 SPAPSLGER--------LEPRKIPLEDEVPGVPGEMEPEPGYRGDREK----SATESTPG 1648
Query: 1378 VKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSL 1420
+ + PL G+ +PE +T GD + K ED D L
Sbjct: 1649 ERGEEKPLDGQE-----HRERPEGET-GD-LGKREDVKGDREL 1684
Score = 63 (27.2 bits), Expect = 6.0e-58, Sum P(3) = 6.0e-58
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPS 796
+P PDP + + S + +P+ T + + ++ P P + +PS KG+ G P
Sbjct: 1514 MPELMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSE-KGE-GIRTPL 1571
Query: 797 SAVAALNSE 805
A N E
Sbjct: 1572 EKEEAENQE 1580
Score = 56 (24.8 bits), Expect = 7.5e-56, Sum P(3) = 7.5e-56
Identities = 25/86 (29%), Positives = 36/86 (41%)
Query: 678 SSQPTTAFVPVAP-GSQSASACPSTPMQP----KGRGRRI-------QSGEQVPRRRGKK 725
+S PT P P S + S C S P P KG G R ++ E+ P + +
Sbjct: 1531 ASSPTKTS-PTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKEEAENQEEKPEKNSR- 1588
Query: 726 IGLVLPAASDDIPSPGPDPKTNEQPQ 751
IG + +D PSP P +P+
Sbjct: 1589 IGEKMETEAD-APSPAPSLGERLEPR 1613
Score = 54 (24.1 bits), Expect = 6.0e-58, Sum P(3) = 6.0e-58
Identities = 41/154 (26%), Positives = 62/154 (40%)
Query: 1865 EAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDK-DPDSNLVV-LEDSKG 1922
E G+ G+ +P+ E E EE P +S E K++ D P +L LE K
Sbjct: 1562 EKGE--GI-RTPLEKEEAENQEEK--PEKNSRIGE-KMETEADAPSPAPSLGERLEPRKI 1615
Query: 1923 SIGDQMDCCQSGVVVPEN--LSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETV 1980
+ D++ G + PE D + ++ P E E+ P+ Q E +
Sbjct: 1616 PLEDEVPGVP-GEMEPEPGYRGDREKSATESTPGER-----GEEKPLDGQEHRERPEGET 1669
Query: 1981 AEAGDQMDISIMPEKLPEHLDIPASLATPEEKTE 2014
+ G + D+ E P D P S EEKTE
Sbjct: 1670 GDLGKREDVKGDRELRPGPRDEPRSNGRREEKTE 1703
Score = 53 (23.7 bits), Expect = 4.4e-57, Sum P(2) = 4.4e-57
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E+ D + + EE++E D+ P G S+ + + + K P+
Sbjct: 1355 EDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPL 1399
Score = 41 (19.5 bits), Expect = 1.4e-56, Sum P(3) = 1.4e-56
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 1774 ESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSENMGEKDDISSE 1820
E + + E G+ + L G ++ E PE ++ ++G+++D+ +
Sbjct: 1639 EKSATESTPGERGEEKPLDGQEHRER----PEGETGDLGKREDVKGD 1681
Score = 41 (19.5 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 1486 SPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKC 1545
S +S T+ S + + N P +P + +P G +K E + E + K
Sbjct: 1529 SRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTP--LEKEEAENQEEKPEK- 1585
Query: 1546 PSDAIVNNLLETPLDIKS 1563
++ + +ET D S
Sbjct: 1586 --NSRIGEKMETEADAPS 1601
Score = 38 (18.4 bits), Expect = 2.8e-56, Sum P(3) = 2.8e-56
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFS----PRSMSGVVDELVDEAGD 1868
+ A+E+ G+R +E +DG P +G + + D GD
Sbjct: 1639 EKSATESTPGERGEEKPLDGQEHRERPEGETGDLGKREDVKGD 1681
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 640 (230.4 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 179/571 (31%), Positives = 286/571 (50%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ L I+W +++DE HR+KN K L Y+ H+LLLT
Sbjct: 913 KFHVLLTSYELITI--DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 970
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP FN+ E F + F D S + I
Sbjct: 971 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ----------IK 1013
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L S G
Sbjct: 1014 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGN 1073
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLCGKLEMLDRLLPKLKA 256
S+ N +M+L+ CNHPYL + A E L Y +++ GKL +L ++L KLK
Sbjct: 1074 QVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKE 1133
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L ++ Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1134 QGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLL 1193
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHRIGQ V++ RF T +VEE++
Sbjct: 1194 STRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERI 1253
Query: 377 RASAEHKLGVANQSITAGFFDN--NTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXX 434
A+ K+ + + + G + S ++ + L+ E K+E
Sbjct: 1254 TQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIH 1313
Query: 435 XRSES-------EIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT-DDDL 486
+E+ D E D Q E ++++ K+ + + + + + + ++ ++++
Sbjct: 1314 YDNEAIARLLDRNQDATEDTDVQNMNEYLSSF-KVAQYVVREEDKIEEIEREIIKQEENV 1372
Query: 487 KALYEAMKI---YDAPKTGVSPNVGV-KRKGEHLGALDTQHYGRGKRAREVRSYEEQWTE 542
Y + Y+ + ++ N+G KR + + D + ++ EE+ +
Sbjct: 1373 DPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEE--D 1430
Query: 543 EEFEKMCQAESSDSPKLKEEGLEKSLPTVVS 573
E+F++ + +L+ E +K LP +++
Sbjct: 1431 EDFDERPEGRRQSKRQLRNEK-DKPLPPLLA 1460
Score = 78 (32.5 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 34/138 (24%), Positives = 53/138 (38%)
Query: 1188 AKKQSSDDKTCSVTPTVE------TPPPGFNSPNEN-PGELTGTKNDASVRGDHTPVSGH 1240
+ + SS KT TP T P +P+E G T + + + + P
Sbjct: 1587 SSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKEEAENQEEKPEKNS 1646
Query: 1241 TLASK--TEALKPENKAQAG-RIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQS 1297
+ K TEA P G R+E P + +P VP PG+ E+S
Sbjct: 1647 RIGEKMETEADAPSPAPSLGERLE--PRKIPLEDEVPGVPGEMEPEPGY----RGDREKS 1700
Query: 1298 RNQNNPEVKGEETPVSSE 1315
++ P +GEE P+ +
Sbjct: 1701 ATESTPGERGEEKPLDGQ 1718
Score = 74 (31.1 bits), Expect = 3.0e-59, Sum P(2) = 3.0e-59
Identities = 41/163 (25%), Positives = 65/163 (39%)
Query: 1261 ENIANSSPDDKSLPMVPNLETAPPGFDIPIEKH---NEQSRNQNNPEVKGEETPVSSEAP 1317
E A +SP S P P G P+EK N++ + + N + GE+ ++AP
Sbjct: 1602 EASATNSPCT-SKPATPAPSEKGEGIRTPLEKEEAENQEEKPEKNSRI-GEKMETEADAP 1659
Query: 1318 ASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAK 1377
+ + + + + +D+ V ME PG+ EK S TE
Sbjct: 1660 SPAPSLGER--------LEPRKIPLEDEVPGVPGEMEPEPGYRGDREK----SATESTPG 1707
Query: 1378 VKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSL 1420
+ + PL G+ +PE +T GD + K ED D L
Sbjct: 1708 ERGEEKPLDGQE-----HRERPEGET-GD-LGKREDVKGDREL 1743
Score = 63 (27.2 bits), Expect = 7.0e-58, Sum P(3) = 7.0e-58
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPS 796
+P PDP + + S + +P+ T + + ++ P P + +PS KG+ G P
Sbjct: 1573 MPELMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSE-KGE-GIRTPL 1630
Query: 797 SAVAALNSE 805
A N E
Sbjct: 1631 EKEEAENQE 1639
Score = 56 (24.8 bits), Expect = 8.7e-56, Sum P(3) = 8.7e-56
Identities = 25/86 (29%), Positives = 36/86 (41%)
Query: 678 SSQPTTAFVPVAP-GSQSASACPSTPMQP----KGRGRRI-------QSGEQVPRRRGKK 725
+S PT P P S + S C S P P KG G R ++ E+ P + +
Sbjct: 1590 ASSPTKTS-PTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKEEAENQEEKPEKNSR- 1647
Query: 726 IGLVLPAASDDIPSPGPDPKTNEQPQ 751
IG + +D PSP P +P+
Sbjct: 1648 IGEKMETEAD-APSPAPSLGERLEPR 1672
Score = 54 (24.1 bits), Expect = 7.0e-58, Sum P(3) = 7.0e-58
Identities = 41/154 (26%), Positives = 62/154 (40%)
Query: 1865 EAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDK-DPDSNLVV-LEDSKG 1922
E G+ G+ +P+ E E EE P +S E K++ D P +L LE K
Sbjct: 1621 EKGE--GI-RTPLEKEEAENQEEK--PEKNSRIGE-KMETEADAPSPAPSLGERLEPRKI 1674
Query: 1923 SIGDQMDCCQSGVVVPEN--LSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETV 1980
+ D++ G + PE D + ++ P E E+ P+ Q E +
Sbjct: 1675 PLEDEVPGVP-GEMEPEPGYRGDREKSATESTPGER-----GEEKPLDGQEHRERPEGET 1728
Query: 1981 AEAGDQMDISIMPEKLPEHLDIPASLATPEEKTE 2014
+ G + D+ E P D P S EEKTE
Sbjct: 1729 GDLGKREDVKGDRELRPGPRDEPRSNGRREEKTE 1762
Score = 53 (23.7 bits), Expect = 4.8e-57, Sum P(2) = 4.8e-57
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E+ D + + EE++E D+ P G S+ + + + K P+
Sbjct: 1414 EDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPL 1458
Score = 41 (19.5 bits), Expect = 1.6e-56, Sum P(3) = 1.6e-56
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 1774 ESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSENMGEKDDISSE 1820
E + + E G+ + L G ++ E PE ++ ++G+++D+ +
Sbjct: 1698 EKSATESTPGERGEEKPLDGQEHRER----PEGETGDLGKREDVKGD 1740
Score = 41 (19.5 bits), Expect = 3.2e-54, Sum P(3) = 3.2e-54
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 1486 SPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKC 1545
S +S T+ S + + N P +P + +P G +K E + E + K
Sbjct: 1588 SRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTP--LEKEEAENQEEKPEK- 1644
Query: 1546 PSDAIVNNLLETPLDIKS 1563
++ + +ET D S
Sbjct: 1645 --NSRIGEKMETEADAPS 1660
Score = 38 (18.4 bits), Expect = 3.3e-56, Sum P(3) = 3.3e-56
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFS----PRSMSGVVDELVDEAGD 1868
+ A+E+ G+R +E +DG P +G + + D GD
Sbjct: 1698 EKSATESTPGERGEEKPLDGQEHRERPEGETGDLGKREDVKGD 1740
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 642 (231.1 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 182/554 (32%), Positives = 276/554 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +++DE HR+KN K L +Y H+LLLT
Sbjct: 828 KFHVLLTSYELITI--DTAVLGSIDWACLVVDEAHRLKNNQSKFFRILNNYPLQHKLLLT 885
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ E F + F D + + I
Sbjct: 886 GTPLQNNLEELFHLLNFLTPERFSNLEGFLEEF-------ADIAKEDQ----------IK 928
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 929 KLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGGN 988
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP-IVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL A E + Y + + GKL +L ++L KLK
Sbjct: 989 QVSLLNVVMDLKKCCNHPYLFPAAAMEAAKMPNGMYEGGGLTKSSGKLLLLQKMLRKLKE 1048
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +GG R ID+FN +P F+FLL
Sbjct: 1049 GGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQEAIDRFNAPGAPQFVFLL 1108
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTV+I+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1109 STRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERI 1168
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXR 436
A+ K+ + + + G + T + ++E L+ +L+ +E
Sbjct: 1169 TQVAKKKMMLTHLVVRPGL-GSKTGSMSKQE-LDDILKFGTEELFKDEGEGENKEGQEDS 1226
Query: 437 SESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLP-SRLVTDDDLKALYEAMKI 495
S D +++D+ + AT ++ + E L ++ V D+ +A E +
Sbjct: 1227 SVIHYDD-KAIDRLLDRNQDATDDTELQSMN---EYLSSFKVAQYVVKDEEEAEEEVQRE 1282
Query: 496 YDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSYEEQWTEEEFEKMCQAE 552
+ V P+ K H ++ G+GKR R+ +Y + E+ + Q++
Sbjct: 1283 IIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSD 1342
Query: 553 S-SDSPKLKEEGLE 565
SD EEG E
Sbjct: 1343 GQSDYSVASEEGDE 1356
Score = 76 (31.8 bits), Expect = 4.4e-59, Sum P(3) = 4.4e-59
Identities = 35/137 (25%), Positives = 58/137 (42%)
Query: 2314 VPLDESKGPDAEVSS-------QTAIEGGGVVSIPVPEEADGPASFLAAEEEKN-ECSDK 2365
VP E G DA+ + A E I VP+E DG A+ + E+EK E +K
Sbjct: 1544 VPKAEDAGKDADKEKVKNGDGEKEANENKNSEVIAVPDE-DGRAASASEEKEKGKEEKEK 1602
Query: 2366 EPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAEDKTENEIEED 2425
P SS ++ + E K E D ++T + G + ++ K E + +E
Sbjct: 1603 TPESSSEAEKADGKQEEKEEENAKSGDSEEKTDDTDKPKGSEADKET-SDAKGEKKDDEP 1661
Query: 2426 PVVNSVAVEESKGSEAD 2442
+++ V + K + D
Sbjct: 1662 EKMDTTPVTDEKKGQKD 1678
Score = 75 (31.5 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 50/193 (25%), Positives = 69/193 (35%)
Query: 1081 KTPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETAD 1140
KTPTTG P Q + P+ PDG + + K ++ G K + E
Sbjct: 1524 KTPTTG-TP---SDTQPNTPA-PDGVPKAEDAGKDADKEKVKNGDGEKEANENKNSEVIA 1578
Query: 1141 VNDV---ARVMKEIFSETCSSKAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKT 1197
V D A E + K KT +SS K E AK S++KT
Sbjct: 1579 VPDEDGRAASASEEKEKGKEEKEKTPESSSEAEK----ADGKQEEKEEENAKSGDSEEKT 1634
Query: 1198 CSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQ- 1256
P G + E K+D + D TPV+ K E K K +
Sbjct: 1635 DDTDK-----PKGSEADKETSDAKGEKKDDEPEKMDTTPVTDEKKGQKDE--KDSGKTEE 1687
Query: 1257 AGRIENIANSSPD 1269
AG++ N S+ D
Sbjct: 1688 AGKLPN-GESAKD 1699
Score = 72 (30.4 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 37/170 (21%), Positives = 69/170 (40%)
Query: 2245 PSASSIPRGESKGPDAEANNIIDAEGGGNMRQT-------VPQDLGLPLSSSDVEEEKIE 2297
P+ +P+ E G DA+ + + +G + VP + G S+S+ +E+ E
Sbjct: 1539 PAPDGVPKAEDAGKDADKEKVKNGDGEKEANENKNSEVIAVPDEDGRAASASEEKEKGKE 1598
Query: 2298 GFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEE 2357
K S E+ + +E + +A+ S + E P EAD S E+
Sbjct: 1599 EKEKTPESSSEAEKADGKQEEKEEENAK--SGDSEEKTDDTDKPKGSEADKETSDAKGEK 1656
Query: 2358 EKNECS--DKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMG 2405
+ +E D PV + ++ K E + +G A ++++ G G
Sbjct: 1657 KDDEPEKMDTTPVTDEKKGQKDEKDSGKTEEAGKLPNGESA-KDSAAGAG 1705
Score = 63 (27.2 bits), Expect = 2.1e-58, Sum P(2) = 2.1e-58
Identities = 46/182 (25%), Positives = 71/182 (39%)
Query: 2272 GNMRQTVPQDLG-LPLSSSDVEE-EKIEG-FSKP----VGSEKE-SIASAVPLDESKGPD 2323
G RQ V +G + L V+E E + G +S P + K S A + P SK P
Sbjct: 1468 GLSRQHVLTRIGVMSLIRKKVQEFEHVNGQWSMPWMMELSENKTTSTAGSHPDSPSKTPT 1527
Query: 2324 AEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIES-KEPEA 2382
S T +P E+A A E+ KN +KE + S++ + + +
Sbjct: 1528 TGTPSDTQPNTPAPDGVPKAEDAGKDAD---KEKVKNGDGEKEANENKNSEVIAVPDEDG 1584
Query: 2383 KAFEPMDVVD-GAVALENTSEGMGGPSPPLVIAEDKTENEIEE-DPVVNSVAVEESKGSE 2440
+A + + G E T E E+K E + D + ++ KGSE
Sbjct: 1585 RAASASEEKEKGKEEKEKTPESSSEAEKADGKQEEKEEENAKSGDSEEKTDDTDKPKGSE 1644
Query: 2441 AD 2442
AD
Sbjct: 1645 AD 1646
Score = 63 (27.2 bits), Expect = 1.0e-57, Sum P(3) = 1.0e-57
Identities = 42/172 (24%), Positives = 68/172 (39%)
Query: 1889 GLPSLSSATKE---EKI-DGSLDKDPDSN----LVVLEDSKGSIGDQMDCCQSGVV---- 1936
G+P A K+ EK+ +G +K+ + N ++ + D G + + G
Sbjct: 1543 GVPKAEDAGKDADKEKVKNGDGEKEANENKNSEVIAVPDEDGRAASASEEKEKGKEEKEK 1602
Query: 1937 VPENLSDFCQPSSSLAPWE---AKIDGSSEK-DPVSSQSVLEGSKETVAEAGDQMDISIM 1992
PE+ S+ + E AK S EK D E KET G++ D
Sbjct: 1603 TPESSSEAEKADGKQEEKEEENAKSGDSEEKTDDTDKPKGSEADKETSDAKGEKKDDE-- 1660
Query: 1993 PEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPK-ESVVEAGDQMGV 2043
PE +D + T E+K + EKD + A + P ES ++ G+
Sbjct: 1661 ----PEKMD--TTPVTDEKKGQKDEKDSGKTEEAGKLPNGESAKDSAAGAGI 1706
Score = 56 (24.8 bits), Expect = 1.1e-57, Sum P(2) = 1.1e-57
Identities = 40/157 (25%), Positives = 63/157 (40%)
Query: 1946 QPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPAS 2005
QP++ K + + KD + V G E A ++ +P++ D A+
Sbjct: 1535 QPNTPAPDGVPKAEDAG-KD-ADKEKVKNGDGEKEANENKNSEVIAVPDE-----DGRAA 1587
Query: 2006 LATPEEKTEGSE---KDPDSSFAA------QEDPKESVVEAGDQMGVSLGGATVMEKSSE 2056
A+ EEK +G E K P+SS A QE+ +E ++GD + T K SE
Sbjct: 1588 SAS-EEKEKGKEEKEKTPESSSEAEKADGKQEEKEEENAKSGDSEEKT--DDTDKPKGSE 1644
Query: 2057 -DLATPPLSLANEEEMIEGFDNDP-TGISMAVMDSKE 2091
D T +++ E D P T D K+
Sbjct: 1645 ADKETSDAKGEKKDDEPEKMDTTPVTDEKKGQKDEKD 1681
Score = 52 (23.4 bits), Expect = 3.0e-57, Sum P(2) = 3.0e-57
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 1361 IPIEKGVEQSGTEIDAKVKWKNTPLP---GEAIVA-GIEVFKPE-NKTDGDSVEKLEDT 1414
+P E G S +E K K + P EA A G + K E N GDS EK +DT
Sbjct: 1579 VPDEDGRAASASEEKEKGKEEKEKTPESSSEAEKADGKQEEKEEENAKSGDSEEKTDDT 1637
Score = 52 (23.4 bits), Expect = 3.0e-57, Sum P(2) = 3.0e-57
Identities = 19/96 (19%), Positives = 37/96 (38%)
Query: 1241 TLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQ 1300
T S +EA K + K + EN + ++K+ + P G + E + + +
Sbjct: 1603 TPESSSEAEKADGKQEEKEEENAKSGDSEEKT-----DDTDKPKGSEADKETSDAKGEKK 1657
Query: 1301 NNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVN 1336
++ K + TPV+ E + + K N
Sbjct: 1658 DDEPEKMDTTPVTDEKKGQKDEKDSGKTEEAGKLPN 1693
Score = 50 (22.7 bits), Expect = 4.9e-57, Sum P(2) = 4.9e-57
Identities = 29/165 (17%), Positives = 50/165 (30%)
Query: 747 NEQPQSESLNPSGGESTATDGNVSSI-PTAPVPDSVSPSAVKGQSGT---IDPSSAVAAL 802
N+ + +P T T G S P P PD V + G+ +
Sbjct: 1509 NKTTSTAGSHPDSPSKTPTTGTPSDTQPNTPAPDGVPKAEDAGKDADKEKVKNGDGEKEA 1568
Query: 803 NSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKT-QSGGVTPRRRGKRQALGSPPISDV 861
N N+ + + K + KT +S + GK++ +
Sbjct: 1569 NENKNSEVIAVPDEDGRAASASEEKEKGKEEKEKTPESSSEAEKADGKQEEKEE---ENA 1625
Query: 862 SAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQP 906
+G +S+ + G K S K + E K+ P
Sbjct: 1626 KSG-DSEEKTDDTDKPKGSEADKETSDAKGEKKDDE-PEKMDTTP 1668
Score = 49 (22.3 bits), Expect = 4.4e-59, Sum P(3) = 4.4e-59
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 1493 ECSTVSVKTDVGNHPQNVE--PTSASPERSGPQNSAVGFCDKSEIPSMEAEVAK 1544
E S + G+HP + PT+ +P + P A K+E +A+ K
Sbjct: 1505 ELSENKTTSTAGSHPDSPSKTPTTGTPSDTQPNTPAPDGVPKAEDAGKDADKEK 1558
Score = 46 (21.3 bits), Expect = 6.1e-56, Sum P(3) = 6.1e-56
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 1881 EREKSEELGLPSLSSATKEEKIDGSLDKDPDSN 1913
E+EK +E + S+++ EK DG ++ + N
Sbjct: 1592 EKEKGKEEKEKTPESSSEAEKADGKQEEKEEEN 1624
Score = 46 (21.3 bits), Expect = 6.1e-56, Sum P(3) = 6.1e-56
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 2167 GVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVE 2202
G A +E+EK + EK P SS +++ G + E
Sbjct: 1584 GRAASASEEKEKGKEEKEKTPESSSEAEKADGKQEE 1619
Score = 45 (20.9 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 30/130 (23%), Positives = 51/130 (39%)
Query: 1199 SVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPV-SGHTLASKTEALKPENKAQA 1257
S T T +SP++ P TGT +D +TP G A + K +
Sbjct: 1507 SENKTTSTAGSHPDSPSKTP--TTGTPSDTQ---PNTPAPDGVPKAEDAGKDADKEKVKN 1561
Query: 1258 GRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAP 1317
G E AN + + + + VP+ + G + E+ + + E+TP SS
Sbjct: 1562 GDGEKEANENKNSEVIA-VPDED----GRAASASEEKEKGKEEK------EKTPESSSEA 1610
Query: 1318 ASTEAFEQEK 1327
+ ++EK
Sbjct: 1611 EKADGKQEEK 1620
Score = 41 (19.5 bits), Expect = 4.3e-56, Sum P(2) = 4.3e-56
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAK 2383
+++DG + + A EE +E D+ S+ S+ P K
Sbjct: 1339 DQSDGQSDYSVASEEGDEDFDER------SEANSRRPNRK 1372
Score = 39 (18.8 bits), Expect = 6.7e-55, Sum P(3) = 6.7e-55
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 1500 KTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAE 1541
KT P + +P + +P+ A DK ++ + + E
Sbjct: 1524 KTPTTGTPSDTQPNTPAPDGVPKAEDAGKDADKEKVKNGDGE 1565
>FB|FBgn0250786 [details] [associations]
symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
exchange of chromosomal proteins" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
GO:GO:0035042 Uniprot:Q7KU24
Length = 1883
Score = 662 (238.1 bits), Expect = 1.5e-59, Sum P(2) = 1.5e-59
Identities = 154/367 (41%), Positives = 208/367 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN +LTTYE ++ D+ L +QW +++DE HR+KN L LK + ++HRLL+T
Sbjct: 632 KFNCILTTYEIVLK--DKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLIT 689
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F + F W N FE N+ D
Sbjct: 690 GTPLQNSLKELWALLH------FIMPDKFDTWEN--FEVQHGNAEDKGYT---------- 731
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
RLHQ L P++LRR+K VE LP K+E+++R E ++ QK K + +N ++ K S
Sbjct: 732 RLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGS 791
Query: 201 VH---NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 257
N V+EL+ CNH L + E+ L L +++ GKL +LD+LL +LK T
Sbjct: 792 TSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKET 851
Query: 258 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 317
HRVL FS M R+LDV+ DYL + + + RLDG G R +D FN + S F FLLS
Sbjct: 852 GHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLS 911
Query: 318 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 377
RAGG+G+NL ADTVIIFD+DWNPQ DLQAQARAHRIGQK V + R T ++VEEQ+
Sbjct: 912 TRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIV 971
Query: 378 ASAEHKL 384
A+ K+
Sbjct: 972 ERAKQKM 978
Score = 54 (24.1 bits), Expect = 4.4e-57, Sum P(4) = 4.4e-57
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 1435 VIGNV-PGNTSEDSSKM-PLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPIN 1489
V+G++ P +E KM P++ L K+ + P VS+ D H+R+ + G I+
Sbjct: 1501 VLGDLDPSIFNECKEKMRPVKKAL--KALDQPDVSLSDQDQLQHTRDCLLQIGKQID 1555
Score = 53 (23.7 bits), Expect = 1.5e-59, Sum P(2) = 1.5e-59
Identities = 20/72 (27%), Positives = 31/72 (43%)
Query: 2004 ASLATPEEKTEGSEKDPDSSFAAQEDPK---ESVVEAGDQMGVSLGGATVMEKSSEDLAT 2060
AS+A EE+ S D + A +ED + ++ G + + K EDL
Sbjct: 1069 ASIAAFEEEPSDSVSKQDQNAAGEEDDSKDWDDIIPEGFRKAID---DQERAKEMEDLYL 1125
Query: 2061 PPL--SLANEEE 2070
PP + AN+ E
Sbjct: 1126 PPRRKTAANQNE 1137
Score = 53 (23.7 bits), Expect = 1.4e-58, Sum P(3) = 1.4e-58
Identities = 38/162 (23%), Positives = 68/162 (41%)
Query: 1767 SSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSE-NMGEKDDISSEHAFGS 1825
S ++ I E AK +VLD H +Q + H S N KDD+S+ FG+
Sbjct: 965 SVEEQIVERAKQKMVLD-HLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGA 1023
Query: 1826 SLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKS 1885
+ +D+ + D + + +D R+ + D + D + + + E
Sbjct: 1024 EELFKDEQEHDD--DLVCD--IDEILRRAETRNEDP--EMPADDLLSAFKVASIAAFE-- 1075
Query: 1886 EELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQ 1927
EE PS S + +++ G D D + ++ E + +I DQ
Sbjct: 1076 EE---PSDSVSKQDQNAAGEEDDSKDWDDIIPEGFRKAIDDQ 1114
Score = 46 (21.3 bits), Expect = 1.4e-58, Sum P(3) = 1.4e-58
Identities = 11/53 (20%), Positives = 26/53 (49%)
Query: 1942 SDFCQPSSSLAPWEAKIDGSSEKD-PVSSQSVLEGSKETVAEAGDQMDISIMP 1993
S F + + P + + + D +S Q L+ +++ + + G Q+D+ + P
Sbjct: 1508 SIFNECKEKMRPVKKALKALDQPDVSLSDQDQLQHTRDCLLQIGKQIDVCLNP 1560
Score = 46 (21.3 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 20/86 (23%), Positives = 34/86 (39%)
Query: 836 KTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALS 895
K ++GG +GK + P G ++ + + SGG + K +D
Sbjct: 1597 KQKAGG-DGEAKGKDKGSSGSPAKSKPNGVTTEEKEKERDRSGGKKKKKD-----KD--- 1647
Query: 896 QELSNKIQVQPCGVATSADVAGPDQK 921
+E S + + G+ TS A P K
Sbjct: 1648 KERSGQARYPETGIPTSGRYADPPLK 1673
Score = 42 (19.8 bits), Expect = 4.4e-57, Sum P(4) = 4.4e-57
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 1076 KRHGRKTPTTGEAPRRRGKKQGSGPSIPDGSAVFDAK 1112
K KT T E P + ++ + S+ G F+AK
Sbjct: 1247 KEEESKTAATDETPGAKQRRARATFSVKLGGVSFNAK 1283
Score = 42 (19.8 bits), Expect = 4.4e-57, Sum P(4) = 4.4e-57
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 706 KGRGRRIQSGEQVPRRRGKKIGLVLPAASDDI-PSPGPDPKTNEQPQSESLNPSGGESTA 764
KG G+R Q + R K +++ D P G D + + +ES N STA
Sbjct: 1391 KG-GQRRQRRPRASRANDAKAASQSASSTIDAKPHDGEDAAGDARTVAESSNSQVDPSTA 1449
Query: 765 TDGN 768
+ N
Sbjct: 1450 SPHN 1453
Score = 40 (19.1 bits), Expect = 4.4e-57, Sum P(4) = 4.4e-57
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1724 PDCLVASDSVNMELVPRDFGVGRRDGDIE 1752
P + SD ++PRD+ R D E
Sbjct: 1850 PSSVYRSDPRGYPVMPRDYPADYRRSDYE 1878
Score = 38 (18.4 bits), Expect = 5.8e-58, Sum P(2) = 5.8e-58
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 2350 ASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
AS A EEE ++ K+ ++ + +SK+
Sbjct: 1069 ASIAAFEEEPSDSVSKQDQNAAGEEDDSKD 1098
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 641 (230.7 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 179/571 (31%), Positives = 286/571 (50%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ L I+W +++DE HR+KN K L Y+ H+LLLT
Sbjct: 852 KFHVLLTSYELITI--DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 909
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP FN+ E F + F D S + I
Sbjct: 910 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ----------IK 952
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L S G
Sbjct: 953 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGN 1012
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLCGKLEMLDRLLPKLKA 256
S+ N +M+L+ CNHPYL + A E L Y +++ GKL +L ++L KLK
Sbjct: 1013 QVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKE 1072
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L ++ Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1073 QGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLL 1132
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHRIGQ V++ RF T +VEE++
Sbjct: 1133 STRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERI 1192
Query: 377 RASAEHKLGVANQSITAGFFDN--NTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXX 434
A+ K+ + + + G + S ++ + L+ E K+E
Sbjct: 1193 TQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIH 1252
Query: 435 XRSES-------EIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT-DDDL 486
+E+ D E D Q E ++++ K+ + + + + + + ++ ++++
Sbjct: 1253 YDNEAIARLLDRNQDATEDTDVQNMNEYLSSF-KVAQYVVREEDKIEEIEREIIKQEENV 1311
Query: 487 KALYEAMKI---YDAPKTGVSPNVGV-KRKGEHLGALDTQHYGRGKRAREVRSYEEQWTE 542
Y + Y+ + ++ N+G KR + + D + ++ EE+ +
Sbjct: 1312 DPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEE--D 1369
Query: 543 EEFEKMCQAESSDSPKLKEEGLEKSLPTVVS 573
E+F++ + +L+ E +K LP +++
Sbjct: 1370 EDFDERPEGRRQSKRQLRNEK-DKPLPPLLA 1399
Score = 75 (31.5 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 35/137 (25%), Positives = 53/137 (38%)
Query: 1188 AKKQSSDDKTCSVTPTVE------TPPPGFNSPNEN-PGELTGTKNDASVRGDHTPVSGH 1240
+ + SS KT TP T P +P+E G T + D + P
Sbjct: 1526 SSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGDGSRTPLEKDEVENQEEKPEKNR 1585
Query: 1241 TLAS-KTEALKPENKAQAG-RIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSR 1298
T +TEA P G R+E S ++ +P VP PG+ E+S
Sbjct: 1586 TGEKIETEADAPSPAPSLGERLEPRKISLEEE--VPGVPGEMEPEPGY----RGDREKSA 1639
Query: 1299 NQNNPEVKGEETPVSSE 1315
++ P +GEE P+ +
Sbjct: 1640 TESTPGERGEEKPLDGQ 1656
Score = 62 (26.9 bits), Expect = 1.4e-56, Sum P(3) = 1.4e-56
Identities = 29/92 (31%), Positives = 38/92 (41%)
Query: 678 SSQPTTAFVPVAP-GSQSASACPSTPMQP----KGRGRR-------IQSGEQVPR--RRG 723
+S PT P P S + S C S P P KG G R +++ E+ P R G
Sbjct: 1529 ASSPTKTS-PTTPEASATNSPCTSKPATPAPSEKGDGSRTPLEKDEVENQEEKPEKNRTG 1587
Query: 724 KKIGLVLPAASDDIPSPGPDPKTNEQPQSESL 755
+KI D PSP P +P+ SL
Sbjct: 1588 EKI-----ETEADAPSPAPSLGERLEPRKISL 1614
Score = 61 (26.5 bits), Expect = 4.9e-58, Sum P(2) = 4.9e-58
Identities = 32/130 (24%), Positives = 51/130 (39%)
Query: 1261 ENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVK--GEETPVSSEAPA 1318
E A +SP S P P G P+EK +E + PE GE+ ++AP+
Sbjct: 1541 EASATNSPCT-SKPATPAPSEKGDGSRTPLEK-DEVENQEEKPEKNRTGEKIETEADAPS 1598
Query: 1319 STEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKV 1378
+ + + +S +++ V ME PG+ EK S TE
Sbjct: 1599 PAPSLGER--------LEPRKISLEEEVPGVPGEMEPEPGYRGDREK----SATESTPGE 1646
Query: 1379 KWKNTPLPGE 1388
+ + PL G+
Sbjct: 1647 RGEEKPLDGQ 1656
Score = 58 (25.5 bits), Expect = 1.6e-57, Sum P(3) = 1.6e-57
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPS 796
+P PDP + + S + +P+ T + + ++ P P + +PS KG G+ P
Sbjct: 1512 MPELMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSE-KGD-GSRTPL 1569
Query: 797 SAVAALNSE 805
N E
Sbjct: 1570 EKDEVENQE 1578
Score = 54 (24.1 bits), Expect = 1.6e-57, Sum P(3) = 1.6e-57
Identities = 31/135 (22%), Positives = 49/135 (36%)
Query: 2175 EEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVPETVPEELGLPSSPMVVXX 2234
E E E EK G ++ E+ P P + G+ + P + E +P P +
Sbjct: 1573 EVENQEEKPEKNRTGEKIETEADAPSPAPSL-----GERLEPRKISLEEEVPGVPGEMEP 1627
Query: 2235 XXXXXXXXXXPSASSIP--RGESK---G------PDAEANNI---IDAEGGGNMRQTVPQ 2280
+ S P RGE K G P+ E ++ D +G +R P+
Sbjct: 1628 EPGYRGDREKSATESTPGERGEEKPLDGQEHRERPEGETGDLGKREDVKGDRELRPGPPR 1687
Query: 2281 DLGLPLSSSDVEEEK 2295
D P + + EK
Sbjct: 1688 DEPRPNGRREEKAEK 1702
Score = 54 (24.1 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 36/146 (24%), Positives = 48/146 (32%)
Query: 1338 ADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDA-KVKWKNTPLPGEAIVAGIEV 1396
AD + S T T P + T + K TPL + + E
Sbjct: 1521 ADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGDGSRTPLEKDEVENQEE- 1579
Query: 1397 FKPENKTDGDSVEKLEDTVDDH-SLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETP 1455
KPE G+ +E D SL + L R + V G VPG +
Sbjct: 1580 -KPEKNRTGEKIETEADAPSPAPSLGERLEPRKISLEEEVPG-VPGEMEPEPGYRGDREK 1637
Query: 1456 LIMKSTEGPSVSMKADDVADHSRETP 1481
+ST G K D +H RE P
Sbjct: 1638 SATESTPGERGEEKPLDGQEH-RERP 1662
Score = 53 (23.7 bits), Expect = 3.4e-57, Sum P(2) = 3.4e-57
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E+ D + + EE++E D+ P G S+ + + + K P+
Sbjct: 1353 EDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPL 1397
Score = 50 (22.7 bits), Expect = 2.5e-55, Sum P(3) = 2.5e-55
Identities = 16/80 (20%), Positives = 32/80 (40%)
Query: 1486 SPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKC 1545
S +S T+ S + + N P +P + +P G + +K E+ + E + K
Sbjct: 1527 SRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGDGSRTP--LEKDEVENQEEKPEKN 1584
Query: 1546 PSDAIVNNLLETPLDIKSIG 1565
+ + + P S+G
Sbjct: 1585 RTGEKIETEADAPSPAPSLG 1604
Score = 44 (20.5 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
Identities = 16/72 (22%), Positives = 27/72 (37%)
Query: 2003 PASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPP 2062
PA+ A P EK +GS + ++ K G+++ + E L
Sbjct: 1553 PATPA-PSEKGDGSRTPLEKDEVENQEEKPEKNRTGEKIETEADAPSPAPSLGERLEPRK 1611
Query: 2063 LSLANEEEMIEG 2074
+SL E + G
Sbjct: 1612 ISLEEEVPGVPG 1623
Score = 41 (19.5 bits), Expect = 1.4e-56, Sum P(3) = 1.4e-56
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 1774 ESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSENMGEKDDISSE 1820
E + + E G+ + L G ++ E PE ++ ++G+++D+ +
Sbjct: 1636 EKSATESTPGERGEEKPLDGQEHRER----PEGETGDLGKREDVKGD 1678
Score = 38 (18.4 bits), Expect = 2.8e-56, Sum P(3) = 2.8e-56
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFS----PRSMSGVVDELVDEAGD 1868
+ A+E+ G+R +E +DG P +G + + D GD
Sbjct: 1636 EKSATESTPGERGEEKPLDGQEHRERPEGETGDLGKREDVKGD 1678
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 624 (224.7 bits), Expect = 3.8e-59, Sum P(3) = 3.8e-59
Identities = 177/555 (31%), Positives = 274/555 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +I+DE HR+KN K L Y H+LLLT
Sbjct: 837 KFHVLLTSYELITI--DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT 894
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ E F + F D + + I
Sbjct: 895 GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----------IK 937
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 938 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGN 997
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL + A E + Y ++R GKL +L ++L LK
Sbjct: 998 QVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKE 1057
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1118 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI 1177
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXR 436
A+ K+ + + + G + T + ++E L+ +L+ EE
Sbjct: 1178 TQVAKKKMMLTHLVVRPGL-GSKTGSMSKQE-LDDILK-FGTEELFKDEATDGGGDNKEG 1234
Query: 437 SESEIDVFE--SVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMK 494
+S + ++ ++++ + T ++G+ + +V ++++ E +
Sbjct: 1235 EDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFK-VAQYVVREEEMGEEEEVER 1293
Query: 495 IYDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSYEEQWTEEEFEKMCQA 551
+ V P+ K H ++ G+GKR R+ +Y + E+ + Q+
Sbjct: 1294 EIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQS 1353
Query: 552 ES-SDSPKLKEEGLE 565
++ SD EEG E
Sbjct: 1354 DNQSDYSVASEEGDE 1368
Score = 94 (38.1 bits), Expect = 3.8e-59, Sum P(3) = 3.8e-59
Identities = 34/111 (30%), Positives = 50/111 (45%)
Query: 2317 DESKGPDAEVSSQTAIEGG-GVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQI 2375
+ES + EV S TA E P P A PA+ A E++K + P G ++
Sbjct: 1567 EESTEGEKEVKS-TAPEATVECAQPPAPAPATAPATATAPEDDKAPA--EPPEGEE--KV 1621
Query: 2376 ESKEPEAKAFEPMDV-VDGAVALENTSEGMGGPSPPLVIAEDKTENEIEED 2425
E E + + EPM+ G +E E P+V+ EDK E + EE+
Sbjct: 1622 EKAEVKERTEEPMETEAKGTTEVEKVEEKSAVDLTPIVV-EDKEEKKEEEE 1671
Score = 76 (31.8 bits), Expect = 7.4e-58, Sum P(2) = 7.4e-58
Identities = 43/161 (26%), Positives = 62/161 (38%)
Query: 1186 EVAKKQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASK 1245
E KK S TPT TP G PN P + ++ + +
Sbjct: 1518 EENKKMSQPGSPSPKTPTPSTP--GDTQPN-TPAPVPPAEDGIKIEENSLKEE-----ES 1569
Query: 1246 TEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEV 1305
TE K E K+ A + + P + P TAP P E + + + EV
Sbjct: 1570 TEGEK-EVKSTAPEA-TVECAQPPAPAPATAPATATAPEDDKAPAEPPEGEEKVEK-AEV 1626
Query: 1306 KGE-ETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDK 1345
K E P+ +EA +TE EKV S+ V+L + +DK
Sbjct: 1627 KERTEEPMETEAKGTTEV---EKVEEKSA-VDLTPIVVEDK 1663
Score = 73 (30.8 bits), Expect = 1.5e-57, Sum P(2) = 1.5e-57
Identities = 32/131 (24%), Positives = 50/131 (38%)
Query: 1946 QPSSSLAPWEAKIDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPA 2004
QP++ AP DG E++ + + EG KE V + + P PA
Sbjct: 1543 QPNTP-APVPPAEDGIKIEENSLKEEESTEGEKE-VKSTAPEATVECAQPPAPAPATAPA 1600
Query: 2005 SLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATP--P 2062
+ PE+ +E + + KE E M G T +EK E A P
Sbjct: 1601 TATAPEDDKAPAEPPEGEEKVEKAEVKERTEEP---METEAKGTTEVEKVEEKSAVDLTP 1657
Query: 2063 LSLANEEEMIE 2073
+ + ++EE E
Sbjct: 1658 IVVEDKEEKKE 1668
Score = 56 (24.8 bits), Expect = 3.6e-55, Sum P(3) = 3.6e-55
Identities = 29/118 (24%), Positives = 47/118 (39%)
Query: 1364 EKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSLVKE 1423
EK V+ + E A V+ P P A ++K + E E+ V+ VKE
Sbjct: 1573 EKEVKSTAPE--ATVECAQPPAPAPATAPATATAPEDDKAPAEPPEG-EEKVEKAE-VKE 1628
Query: 1424 LIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETP 1481
P ++ G E+ S + L TP++++ E + DV + ETP
Sbjct: 1629 RTEE-PMETEAK-GTTEVEKVEEKSAVDL-TPIVVEDKEEKKEEEEKKDVMLQNGETP 1683
Score = 55 (24.4 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 35/164 (21%), Positives = 62/164 (37%)
Query: 1792 PGADNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFS 1851
PG P VP + E++ + E + ++ A EA + +
Sbjct: 1539 PGDTQPNTPAPVPPAEDGIKIEENSLKEEESTEGEKEVKSTAPEATVECAQPPAPAPATA 1598
Query: 1852 PRSMSGVVDELVDEAGDHMGVSHSPVHVVE-REKSEELGLPSLSSATKEEKID--GSLDK 1908
P + + D D+A V E +E++EE T+ EK++ ++D
Sbjct: 1599 PATATAPED---DKAPAEPPEGEEKVEKAEVKERTEEPMETEAKGTTEVEKVEEKSAVDL 1655
Query: 1909 DPDSNLVVLEDS--KGSIGDQMDCCQSGVVVPENLSDFCQPSSS 1950
P +V+ED K ++ D P++LSD Q +S
Sbjct: 1656 TP----IVVEDKEEKKEEEEKKDVMLQNGETPKDLSDEKQKKNS 1695
Score = 51 (23.0 bits), Expect = 5.0e-54, Sum P(3) = 5.0e-54
Identities = 34/119 (28%), Positives = 50/119 (42%)
Query: 1266 SSPDDKSLPMVPNLETAPPGFD-IPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFE 1324
S+P D P P PP D I IE+++ + + + E GE+ V S AP +T
Sbjct: 1537 STPGDTQ-PNTP--APVPPAEDGIKIEENS--LKEEESTE--GEKE-VKSTAPEATVECA 1588
Query: 1325 QEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVKWKNT 1383
Q ++ A DDK PA E G + +EK + TE + + K T
Sbjct: 1589 QPPAPAPATAPATATAPEDDKA----PA-EPPEGEE-KVEKAEVKERTEEPMETEAKGT 1641
Score = 50 (22.7 bits), Expect = 3.8e-59, Sum P(3) = 3.8e-59
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSS 977
P+ E++ ++ Q P T + +TPA VP + G + L E S
Sbjct: 1512 PELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPVPPAEDGIKIEENS--LKEEES 1569
Query: 978 SKG 980
++G
Sbjct: 1570 TEG 1572
Score = 44 (20.5 bits), Expect = 5.0e-54, Sum P(3) = 5.0e-54
Identities = 10/66 (15%), Positives = 32/66 (48%)
Query: 1953 PWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEK 2012
P E + G++E + V +S ++ + V + ++ + + + ++ + P L+ ++K
Sbjct: 1633 PMETEAKGTTEVEKVEEKSAVDLTPIVVEDKEEKKEEEEKKDVMLQNGETPKDLSDEKQK 1692
Query: 2013 TEGSEK 2018
++
Sbjct: 1693 KNSKQR 1698
Score = 43 (20.2 bits), Expect = 8.1e-54, Sum P(3) = 8.1e-54
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 2170 AETVQEEEKTELSCEKQPIGSSVDDESKGP-EVE 2202
AE + EEK E + K+ ++ E+KG EVE
Sbjct: 1612 AEPPEGEEKVEKAEVKERTEEPMETEAKGTTEVE 1645
Score = 40 (19.1 bits), Expect = 4.5e-54, Sum P(2) = 4.5e-54
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 537 EEQWTEEEFEKMCQAESSDSPK-LKEEGLEKS 567
+E+ EEE +K ++ ++PK L +E +K+
Sbjct: 1663 KEEKKEEEEKKDVMLQNGETPKDLSDEKQKKN 1694
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 646 (232.5 bits), Expect = 4.0e-59, P = 4.0e-59
Identities = 163/412 (39%), Positives = 220/412 (53%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF V++TT+E ++ D P+L KIQW ++IDE HR+KN +CKL LK H++LLT
Sbjct: 491 KFQVVITTFEMILA--DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLT 548
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F + F GD + +
Sbjct: 549 GTPLQNSVEELFSLLNFLEPQQFPSETAFLEEF-------GDLKTEEQ----------VK 591
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + SKG +
Sbjct: 592 KLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--SKGAN 649
Query: 201 VHN------SVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEM 246
HN ++MELR CNHPYL E++ P L +++ GKL +
Sbjct: 650 QHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVL 709
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
+D+LLPKL A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F +
Sbjct: 710 IDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK 769
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 770 PDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL 829
Query: 367 ETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
T + E ++ A KLG+ Q I N + E +E LLR+
Sbjct: 830 ITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKME-VEDLLRK 880
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 624 (224.7 bits), Expect = 5.1e-59, Sum P(2) = 5.1e-59
Identities = 177/555 (31%), Positives = 274/555 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +I+DE HR+KN K L Y H+LLLT
Sbjct: 837 KFHVLLTSYELITI--DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT 894
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ E F + F D + + I
Sbjct: 895 GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----------IK 937
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 938 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGN 997
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL + A E + Y ++R GKL +L ++L LK
Sbjct: 998 QVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKE 1057
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1118 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI 1177
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXR 436
A+ K+ + + + G + T + ++E L+ +L+ EE
Sbjct: 1178 TQVAKKKMMLTHLVVRPGL-GSKTGSMSKQE-LDDILK-FGTEELFKDEATDGGGDNKEG 1234
Query: 437 SESEIDVFE--SVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMK 494
+S + ++ ++++ + T ++G+ + +V ++++ E +
Sbjct: 1235 EDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFK-VAQYVVREEEMGEEEEVER 1293
Query: 495 IYDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSYEEQWTEEEFEKMCQA 551
+ V P+ K H ++ G+GKR R+ +Y + E+ + Q+
Sbjct: 1294 EIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQS 1353
Query: 552 ES-SDSPKLKEEGLE 565
++ SD EEG E
Sbjct: 1354 DNQSDYSVASEEGDE 1368
Score = 87 (35.7 bits), Expect = 5.1e-59, Sum P(2) = 5.1e-59
Identities = 37/132 (28%), Positives = 59/132 (44%)
Query: 2300 SKPVGSEKESIASAVPLDES-KGPDAEVSSQTAIEGGGVVSIPVPEEA----DGPASFLA 2354
S P ++ + A P ++ K + + + +IEG V PE A PA A
Sbjct: 1537 STPGDTQPNTPAPVPPAEDGIKIEENSLKEEESIEGEKEVKSTAPETAIECTQAPAP--A 1594
Query: 2355 AEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVD-GAVALENTSEGMGGPSPPLVI 2413
+E+EK + P G ++E E + + EPM+ GA +E E P+V+
Sbjct: 1595 SEDEKVVV--EPPEGEE--KVEKAEVKERTEEPMETEPKGAADVEKVEEKSAIDLTPIVV 1650
Query: 2414 AEDKTENEIEED 2425
EDK E + EE+
Sbjct: 1651 -EDKEEKKEEEE 1661
Score = 54 (24.1 bits), Expect = 1.8e-53, Sum P(4) = 1.8e-53
Identities = 14/58 (24%), Positives = 31/58 (53%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEE 1887
++K +AE+ +R +EP P+ G D V++ + + +P+ V ++E+ +E
Sbjct: 1608 EEKVEKAEVKERTEEPMET--EPK---GAAD--VEKVEEKSAIDLTPIVVEDKEEKKE 1658
Score = 48 (22.0 bits), Expect = 2.6e-53, Sum P(3) = 2.6e-53
Identities = 29/105 (27%), Positives = 43/105 (40%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEA--GDQMGVSLG 2046
I I L E I E + + + A ED K VVE G++ +
Sbjct: 1557 IKIEENSLKEEESIEGEKEVKSTAPETAIECTQAPAPASEDEKV-VVEPPEGEE---KVE 1612
Query: 2047 GATVMEKSSEDLATPPLSLANEEEMIEGFDNDPTGISMAVMDSKE 2091
A V E++ E + T P A+ E++ E D T I V++ KE
Sbjct: 1613 KAEVKERTEEPMETEPKGAADVEKVEEKSAIDLTPI---VVEDKE 1654
Score = 47 (21.6 bits), Expect = 1.8e-53, Sum P(4) = 1.8e-53
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSS 977
P+ E++ ++ Q P T + +TPA VP + G + L E S
Sbjct: 1512 PELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPVPPAEDGIKIEENS--LKEEES 1569
Query: 978 SKG 980
+G
Sbjct: 1570 IEG 1572
Score = 47 (21.6 bits), Expect = 3.3e-53, Sum P(3) = 3.3e-53
Identities = 33/146 (22%), Positives = 55/146 (37%)
Query: 1186 EVAKKQSSDDKTCSVTPTVETPPPGF-NSPNENPGELTGTKNDASVRGDHTPVSGHTLAS 1244
E KK S TPT TP N+P P G K + + + + G
Sbjct: 1518 EENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPVPPAEDGIKIEENSLKEEESIEGE---K 1574
Query: 1245 KTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNE--QSRNQNN 1302
+ ++ PE + + A +S D+K + P E ++ E+ E ++ +
Sbjct: 1575 EVKSTAPETAIECTQAP--APASEDEKVVVEPPEGEEKVEKAEVK-ERTEEPMETEPKGA 1631
Query: 1303 PEV-KGEETPVSSEAPASTEAFEQEK 1327
+V K EE P E E++K
Sbjct: 1632 ADVEKVEEKSAIDLTPIVVEDKEEKK 1657
Score = 43 (20.2 bits), Expect = 2.2e-54, Sum P(2) = 2.2e-54
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 537 EEQWTEEEFEKMCQAESSDSPK-LKEEGLEKSL 568
+E+ EEE +K ++ ++PK L +E +K++
Sbjct: 1653 KEEKKEEEEKKEVMLQNGETPKDLNDEKQKKNI 1685
Score = 42 (19.8 bits), Expect = 2.1e-53, Sum P(3) = 2.1e-53
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 2168 VVAETVQEEEKTELSCEKQPIGSSVDDESKGP-EVE 2202
VV E + EEK E + K+ ++ E KG +VE
Sbjct: 1600 VVVEPPEGEEKVEKAEVKERTEEPMETEPKGAADVE 1635
Score = 40 (19.1 bits), Expect = 1.8e-53, Sum P(4) = 1.8e-53
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 2171 ETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDG 2213
E +EEEK E+ + ++DE + ++ ++ DG
Sbjct: 1655 EKKEEEEKKEVMLQNGETPKDLNDEKQKKNIKQRFMFNI-ADG 1696
Score = 37 (18.1 bits), Expect = 6.9e-53, Sum P(3) = 6.9e-53
Identities = 10/60 (16%), Positives = 29/60 (48%)
Query: 1953 PWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEK 2012
P E + G+++ + V +S ++ + V + ++ + E + ++ + P L ++K
Sbjct: 1623 PMETEPKGAADVEKVEEKSAIDLTPIVVEDKEEKKEEEEKKEVMLQNGETPKDLNDEKQK 1682
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 624 (224.7 bits), Expect = 5.1e-59, Sum P(2) = 5.1e-59
Identities = 177/555 (31%), Positives = 274/555 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +I+DE HR+KN K L Y H+LLLT
Sbjct: 844 KFHVLLTSYELITI--DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT 901
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ E F + F D + + I
Sbjct: 902 GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----------IK 944
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 945 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGN 1004
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL + A E + Y ++R GKL +L ++L LK
Sbjct: 1005 QVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKE 1064
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1125 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI 1184
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXR 436
A+ K+ + + + G + T + ++E L+ +L+ EE
Sbjct: 1185 TQVAKKKMMLTHLVVRPGL-GSKTGSMSKQE-LDDILK-FGTEELFKDEATDGGGDNKEG 1241
Query: 437 SESEIDVFE--SVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMK 494
+S + ++ ++++ + T ++G+ + +V ++++ E +
Sbjct: 1242 EDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFK-VAQYVVREEEMGEEEEVER 1300
Query: 495 IYDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSYEEQWTEEEFEKMCQA 551
+ V P+ K H ++ G+GKR R+ +Y + E+ + Q+
Sbjct: 1301 EIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQS 1360
Query: 552 ES-SDSPKLKEEGLE 565
++ SD EEG E
Sbjct: 1361 DNQSDYSVASEEGDE 1375
Score = 87 (35.7 bits), Expect = 5.1e-59, Sum P(2) = 5.1e-59
Identities = 37/132 (28%), Positives = 59/132 (44%)
Query: 2300 SKPVGSEKESIASAVPLDES-KGPDAEVSSQTAIEGGGVVSIPVPEEA----DGPASFLA 2354
S P ++ + A P ++ K + + + +IEG V PE A PA A
Sbjct: 1544 STPGDTQPNTPAPVPPAEDGIKIEENSLKEEESIEGEKEVKSTAPETAIECTQAPAP--A 1601
Query: 2355 AEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVD-GAVALENTSEGMGGPSPPLVI 2413
+E+EK + P G ++E E + + EPM+ GA +E E P+V+
Sbjct: 1602 SEDEKVVV--EPPEGEE--KVEKAEVKERTEEPMETEPKGAADVEKVEEKSAIDLTPIVV 1657
Query: 2414 AEDKTENEIEED 2425
EDK E + EE+
Sbjct: 1658 -EDKEEKKEEEE 1668
Score = 54 (24.1 bits), Expect = 1.9e-53, Sum P(4) = 1.9e-53
Identities = 14/58 (24%), Positives = 31/58 (53%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEE 1887
++K +AE+ +R +EP P+ G D V++ + + +P+ V ++E+ +E
Sbjct: 1615 EEKVEKAEVKERTEEPMET--EPK---GAAD--VEKVEEKSAIDLTPIVVEDKEEKKE 1665
Score = 48 (22.0 bits), Expect = 2.7e-53, Sum P(3) = 2.7e-53
Identities = 29/105 (27%), Positives = 43/105 (40%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEA--GDQMGVSLG 2046
I I L E I E + + + A ED K VVE G++ +
Sbjct: 1564 IKIEENSLKEEESIEGEKEVKSTAPETAIECTQAPAPASEDEKV-VVEPPEGEE---KVE 1619
Query: 2047 GATVMEKSSEDLATPPLSLANEEEMIEGFDNDPTGISMAVMDSKE 2091
A V E++ E + T P A+ E++ E D T I V++ KE
Sbjct: 1620 KAEVKERTEEPMETEPKGAADVEKVEEKSAIDLTPI---VVEDKE 1661
Score = 47 (21.6 bits), Expect = 1.9e-53, Sum P(4) = 1.9e-53
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSS 977
P+ E++ ++ Q P T + +TPA VP + G + L E S
Sbjct: 1519 PELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPVPPAEDGIKIEENS--LKEEES 1576
Query: 978 SKG 980
+G
Sbjct: 1577 IEG 1579
Score = 47 (21.6 bits), Expect = 3.4e-53, Sum P(3) = 3.4e-53
Identities = 33/146 (22%), Positives = 55/146 (37%)
Query: 1186 EVAKKQSSDDKTCSVTPTVETPPPGF-NSPNENPGELTGTKNDASVRGDHTPVSGHTLAS 1244
E KK S TPT TP N+P P G K + + + + G
Sbjct: 1525 EENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPVPPAEDGIKIEENSLKEEESIEGE---K 1581
Query: 1245 KTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNE--QSRNQNN 1302
+ ++ PE + + A +S D+K + P E ++ E+ E ++ +
Sbjct: 1582 EVKSTAPETAIECTQAP--APASEDEKVVVEPPEGEEKVEKAEVK-ERTEEPMETEPKGA 1638
Query: 1303 PEV-KGEETPVSSEAPASTEAFEQEK 1327
+V K EE P E E++K
Sbjct: 1639 ADVEKVEEKSAIDLTPIVVEDKEEKK 1664
Score = 43 (20.2 bits), Expect = 2.2e-54, Sum P(2) = 2.2e-54
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 537 EEQWTEEEFEKMCQAESSDSPK-LKEEGLEKSL 568
+E+ EEE +K ++ ++PK L +E +K++
Sbjct: 1660 KEEKKEEEEKKEVMLQNGETPKDLNDEKQKKNI 1692
Score = 42 (19.8 bits), Expect = 2.1e-53, Sum P(3) = 2.1e-53
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 2168 VVAETVQEEEKTELSCEKQPIGSSVDDESKGP-EVE 2202
VV E + EEK E + K+ ++ E KG +VE
Sbjct: 1607 VVVEPPEGEEKVEKAEVKERTEEPMETEPKGAADVE 1642
Score = 40 (19.1 bits), Expect = 1.9e-53, Sum P(4) = 1.9e-53
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 2171 ETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDG 2213
E +EEEK E+ + ++DE + ++ ++ DG
Sbjct: 1662 EKKEEEEKKEVMLQNGETPKDLNDEKQKKNIKQRFMFNI-ADG 1703
Score = 37 (18.1 bits), Expect = 7.0e-53, Sum P(3) = 7.0e-53
Identities = 10/60 (16%), Positives = 29/60 (48%)
Query: 1953 PWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEK 2012
P E + G+++ + V +S ++ + V + ++ + E + ++ + P L ++K
Sbjct: 1630 PMETEPKGAADVEKVEEKSAIDLTPIVVEDKEEKKEEEEKKEVMLQNGETPKDLNDEKQK 1689
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 624 (224.7 bits), Expect = 6.5e-59, Sum P(2) = 6.5e-59
Identities = 177/555 (31%), Positives = 274/555 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +I+DE HR+KN K L Y H+LLLT
Sbjct: 844 KFHVLLTSYELITI--DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT 901
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ E F + F D + + I
Sbjct: 902 GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----------IK 944
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 945 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGN 1004
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL + A E + Y ++R GKL +L ++L LK
Sbjct: 1005 QVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKE 1064
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1125 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI 1184
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXR 436
A+ K+ + + + G + T + ++E L+ +L+ EE
Sbjct: 1185 TQVAKKKMMLTHLVVRPGL-GSKTGSMSKQE-LDDILK-FGTEELFKDEATDGGGDNKEG 1241
Query: 437 SESEIDVFE--SVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMK 494
+S + ++ ++++ + T ++G+ + +V ++++ E +
Sbjct: 1242 EDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFK-VAQYVVREEEMGEEEEVER 1300
Query: 495 IYDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSYEEQWTEEEFEKMCQA 551
+ V P+ K H ++ G+GKR R+ +Y + E+ + Q+
Sbjct: 1301 EIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQS 1360
Query: 552 ES-SDSPKLKEEGLE 565
++ SD EEG E
Sbjct: 1361 DNQSDYSVASEEGDE 1375
Score = 86 (35.3 bits), Expect = 6.5e-59, Sum P(2) = 6.5e-59
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 2300 SKPVGSEKESIASAVPLDES-KGPDAEVSSQTAIEGGGVVSIPVPE---EADGPASFLAA 2355
S P ++ + A A P ++ K + + + + EG V PE E P A+
Sbjct: 1544 STPGDTQPNTPAPAPPAEDGIKIEENSLKEEESAEGEKEVKSAAPEATVECTQPP-VPAS 1602
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVA-LENTSEGMGGPSPPLVIA 2414
E+EK + P G ++E E + + EPM+ VA +E E G P+V+
Sbjct: 1603 EDEK--VLIEPPEGEE--KVEKAEVKERTEEPMETDPKGVADVEKAEEKAAGDLIPIVV- 1657
Query: 2415 EDKTENEIEED 2425
EDK E + EE+
Sbjct: 1658 EDKEEKKEEEE 1668
Score = 53 (23.7 bits), Expect = 3.0e-53, Sum P(4) = 3.0e-53
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEE 1887
++K +AE+ +R +EP P+ GV D V++A + P+ V ++E+ +E
Sbjct: 1615 EEKVEKAEVKERTEEPMET--DPK---GVAD--VEKAEEKAAGDLIPIVVEDKEEKKE 1665
Score = 50 (22.7 bits), Expect = 3.9e-54, Sum P(3) = 3.9e-54
Identities = 30/131 (22%), Positives = 49/131 (37%)
Query: 1216 ENPGELTGTKNDASVRGDHTPVSGHTLASKTEA--LKP---ENKAQAGRIENIANS--SP 1268
E E+ +A+V PV AS+ E ++P E K + ++
Sbjct: 1578 EGEKEVKSAAPEATVECTQPPVP----ASEDEKVLIEPPEGEEKVEKAEVKERTEEPMET 1633
Query: 1269 DDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKV 1328
D K + V E G IPI +++ + + E K E + E P +Q+K
Sbjct: 1634 DPKGVADVEKAEEKAAGDLIPIVVEDKEEKKEE--EEKKEVMLQNGETPKDLNDEKQKKN 1691
Query: 1329 TNTSSFVNLAD 1339
N+AD
Sbjct: 1692 IKQRFMFNIAD 1702
Score = 48 (22.0 bits), Expect = 2.7e-53, Sum P(3) = 2.7e-53
Identities = 28/111 (25%), Positives = 47/111 (42%)
Query: 1981 AEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ 2040
AE G +++ + + E+ + A PE E ++ P A ED K + +
Sbjct: 1560 AEDGIKIEENSLKEEESAEGEKEVKSAAPEATVECTQP-P---VPASEDEKVLIEPPEGE 1615
Query: 2041 MGVSLGGATVMEKSSEDLATPPLSLANEEEMIEGFDNDPTGISMAVMDSKE 2091
V A V E++ E + T P +A+ E+ E D I + V D +E
Sbjct: 1616 EKVEK--AEVKERTEEPMETDPKGVADVEKAEEKAAGDL--IPIVVEDKEE 1662
Score = 46 (21.3 bits), Expect = 3.9e-54, Sum P(3) = 3.9e-54
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSS 977
P+ E++ ++ Q P T + +TPA P + G + L E S
Sbjct: 1519 PELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAEDGIKIEENS--LKEEES 1576
Query: 978 SKG 980
++G
Sbjct: 1577 AEG 1579
Score = 42 (19.8 bits), Expect = 1.1e-52, Sum P(3) = 1.1e-52
Identities = 32/137 (23%), Positives = 50/137 (36%)
Query: 1186 EVAKKQSSDDKTCSVTPTVETPPPGF-NSPNENPGELTGTKNDASVRGDHTPVSGHTLAS 1244
E KK S TPT TP N+P P G K + + + G
Sbjct: 1525 EENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAEDGIKIEENSLKEEESAEGE---K 1581
Query: 1245 KTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPE 1304
+ ++ PE + + +S D+K L +E PP + +EK + R + E
Sbjct: 1582 EVKSAAPEATVEC--TQPPVPASEDEKVL-----IE--PPEGEEKVEKAEVKERTEEPME 1632
Query: 1305 V--KGEETPVSSEAPAS 1319
KG +E A+
Sbjct: 1633 TDPKGVADVEKAEEKAA 1649
Score = 40 (19.1 bits), Expect = 2.7e-53, Sum P(3) = 2.7e-53
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 2171 ETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDG 2213
E +EEEK E+ + ++DE + ++ ++ DG
Sbjct: 1662 EKKEEEEKKEVMLQNGETPKDLNDEKQKKNIKQRFMFNI-ADG 1703
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 641 (230.7 bits), Expect = 6.6e-59, Sum P(2) = 6.6e-59
Identities = 151/379 (39%), Positives = 216/379 (56%)
Query: 13 YSREKIVHQ-KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
Y+ +K+ KFN LLTTYE ++ D+ LSKI+W Y+++DE HR+KN+ +L L
Sbjct: 721 YNEKKVGRPIKFNALLTTYEVVLK--DKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLE 778
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
+ + ++LL+TGTP F + ++F + + K S ++
Sbjct: 779 FSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENY-KNLSSFNESE------ 831
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENL 190
+ LH LRP +LRR+ VE LP KIER++R E S QK K + E N
Sbjct: 832 --------LANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 883
Query: 191 GSIGNS-KGRSVH--NSVMELRNICNHPYL--SQLHAEEVDTLIPKHYLPPIVRLCGKLE 245
+ +G V N V+EL+ CNHP+L S H D + L I+ GKL
Sbjct: 884 HDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD-INDNSKLDKIILSSGKLV 942
Query: 246 MLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFN 305
+LD+LL +L+ T HRVL FS M R+LD++ +YL+ + +++ RLDG T R +D FN
Sbjct: 943 ILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFN 1002
Query: 306 QQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLR 365
S F FLLS RAGG+G+NL ADTV+IFD+DWNPQ DLQA +RAHRIGQ+ V + R
Sbjct: 1003 APASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYR 1062
Query: 366 FETVQTVEEQVRASAEHKL 384
F T ++VEE++ A+ K+
Sbjct: 1063 FVTSKSVEEEILERAKRKM 1081
Score = 67 (28.6 bits), Expect = 6.6e-59, Sum P(2) = 6.6e-59
Identities = 28/103 (27%), Positives = 51/103 (49%)
Query: 1767 SSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSENMGEKDDISSEHAFGSS 1826
S ++ I E AK +VLD H +Q L N EG + E K + +K+++S+ FG+
Sbjct: 1068 SVEEEILERAKRKMVLD-HLVIQKL----NAEGRLEKRETKKGSNFDKNELSAILRFGAE 1122
Query: 1827 LVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDH 1869
+ ++ ++ E R+ +D R+ V ++ DE +H
Sbjct: 1123 ELFKEDKNDEESKKRLLSMDIDEILERAEQ-VEEKHTDET-EH 1163
Score = 53 (23.7 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 1757 EGGPSNALLSSSKDIIAESAKADVVLDEHGKV 1788
+ GP+N L S+KD ++ KA+ ++ E G++
Sbjct: 1491 KSGPANVSLLSTKDGPRKTQKAEPLVKEEGEM 1522
Score = 37 (18.1 bits), Expect = 9.5e-56, Sum P(2) = 9.5e-56
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 1090 RRRGKKQGSGPSIPDGSAVFDA----KLNQHSQNKSRDSFGSKTISLRS-KQETADVNDV 1144
+ + +++G GPS +GS F K +SQ + G T + K+ NDV
Sbjct: 1630 QEKEEEEGVGPSHLNGSRNFQRQQKFKTAGNSQGSQQVHKGIDTAKFEAWKRRRRTENDV 1689
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 683 (245.5 bits), Expect = 7.2e-59, Sum P(3) = 7.2e-59
Identities = 165/411 (40%), Positives = 231/411 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 921 KFDALITTFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 978
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S +F + F GD + +
Sbjct: 979 GTPLQNTVEELFSLLHFLEPSQFPSESEFLKDF-------GDLKTEEQ----------VQ 1021
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 1022 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHT 1081
Query: 201 ----VHNSVMELRNICNHPYLSQ-------LHAEEVDTLIPKHY-LPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL + E +IP+ + L +VR GKL ++D
Sbjct: 1082 NMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLID 1141
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1142 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1201
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1202 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1261
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAED-RREYLESLLRE 415
+ E ++ A KLG+ QS++ G N T + ++ +E LLR+
Sbjct: 1262 RNSYEREMFDKASLKLGLDKAVLQSMS-GRDGNITGIQQFSKKEIEDLLRK 1311
Score = 52 (23.4 bits), Expect = 3.3e-58, Sum P(4) = 3.3e-58
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 1416 DDHSLVKELIHRSPDH-SDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVA 1474
DD ++ E HR D+ SD+V G ED PL+ P EG + M ++++
Sbjct: 1666 DDKAIAAE--HRVLDNFSDLVEGIDFDKDCEDPEYKPLQGPPKDPDDEGDPLMMMDEEIS 1723
Score = 47 (21.6 bits), Expect = 6.8e-58, Sum P(4) = 6.8e-58
Identities = 18/90 (20%), Positives = 39/90 (43%)
Query: 1276 VPNLETAPPGFDIPIEKHNEQSRNQNNPEVK-----GEETPVSSEAPASTEAFEQEKVTN 1330
V + +TAP +P K ++ + + ++ + SS + +ST+ E EK
Sbjct: 2047 VGSSDTAPLSRSVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEK 2106
Query: 1331 TSSFVNLADLSSDDKTCSVTPAMETAPGFD 1360
++ + L ++ S+T + + P D
Sbjct: 2107 LTADRSRPKLYDEESLLSLTMSQDGFPNED 2136
Score = 45 (20.9 bits), Expect = 7.2e-59, Sum P(3) = 7.2e-59
Identities = 16/66 (24%), Positives = 28/66 (42%)
Query: 1260 IENIANSSPDDKSLPMVPNL--ETAPPGFDIPIEKHNEQSR---NQNNPEVKGEETPVSS 1314
+ ++ +SS SLP +P + APP D H+ + ++ G T
Sbjct: 2459 VSSLGHSSTTSASLPFMPFVMGAAAPPHVDSSTMLHHHHHHPHPHHHHHHHPGLRTTGYP 2518
Query: 1315 EAPAST 1320
+PA+T
Sbjct: 2519 SSPATT 2524
Score = 45 (20.9 bits), Expect = 8.2e-58, Sum P(5) = 8.2e-58
Identities = 15/52 (28%), Positives = 21/52 (40%)
Query: 1990 SIMPEKLPEHLDIPASL----ATPEEKTEGSEKDPDSSFAAQEDPKESVVEA 2037
S+ P KL + D + L +P + S SS ED KE + A
Sbjct: 2058 SVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLTA 2109
Score = 42 (19.8 bits), Expect = 7.2e-59, Sum P(3) = 7.2e-59
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R R++ S ++ + TE + E +C+A
Sbjct: 1458 YGWG-RWRDILSHGRFKRRMTERDVETICRA 1487
Score = 42 (19.8 bits), Expect = 6.8e-58, Sum P(4) = 6.8e-58
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEE 2357
GP + ++ G PVP G A+ +A EE
Sbjct: 2194 GPGNHLLDSPSLTPGEDGDSPVPTPRSGSAASMAEEE 2230
Score = 42 (19.8 bits), Expect = 8.8e-57, Sum P(5) = 8.8e-57
Identities = 21/102 (20%), Positives = 37/102 (36%)
Query: 1283 PPGFDIP-----IEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNL 1337
PPG ++P + E R V + + + S A + N + +
Sbjct: 1917 PPGLELPKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGASA 1976
Query: 1338 ADLSSDD-----KTCSVTPAMETAPGFDIPIEKGVEQSGTEI 1374
A LS + C+ A + D P+EK E+S ++
Sbjct: 1977 ASLSRCSTPLLHQQCTSRTASPSPLRPDAPVEKSPEESTVQV 2018
Score = 40 (19.1 bits), Expect = 3.3e-58, Sum P(4) = 3.3e-58
Identities = 8/38 (21%), Positives = 22/38 (57%)
Query: 1714 GDKKADCKMEPDCLVASDSVNMELVPRDFGVGRRDGDI 1751
G++K ++E +C+ + ++++L R + + DG +
Sbjct: 2290 GNRKKLVELEVECMEEPNHLDLDLETRIPVINKVDGTL 2327
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 687 (246.9 bits), Expect = 8.1e-59, Sum P(5) = 8.1e-59
Identities = 168/412 (40%), Positives = 233/412 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 872 KFDALITTFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 929
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S +F + F GD + +
Sbjct: 930 GTPLQNTVEELFSLLHFLEPSQFPSESEFLKDF-------GDLKTEEQ----------VQ 972
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 973 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHT 1032
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEE-VDT-------LIPKHY-LPPIVRLCGKLEML 247
+ N++MELR CNHPYL AEE + T +IP + L +VR GKL ++
Sbjct: 1033 NMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLI 1092
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++
Sbjct: 1093 DKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKP 1152
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 1153 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLI 1212
Query: 368 TVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAED-RREYLESLLRE 415
T + E ++ A KLG+ QS++ G N T + ++ +E LLR+
Sbjct: 1213 TRNSYEREMFDKASLKLGLDKAVLQSMS-GRDGNITGIQQFSKKEIEDLLRK 1263
Score = 53 (23.7 bits), Expect = 8.1e-59, Sum P(5) = 8.1e-59
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 1416 DDHSLVKELIHRSPDH-SDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVA 1474
DD ++ E HR D+ SD+V G ED PL+ P + EG + M ++++
Sbjct: 1618 DDKAIAAE--HRVLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEIS 1675
Score = 53 (23.7 bits), Expect = 8.1e-59, Sum P(5) = 8.1e-59
Identities = 22/117 (18%), Positives = 47/117 (40%)
Query: 1962 SEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPD 2021
S+ P+ S+SV E ++ ++D+S KL +S ++ T+ SE + +
Sbjct: 2002 SDTTPLVSRSVPPVKLEDEDDSDSELDLS----KLSPSSSSSSSSSSSSSSTDESEDEKE 2057
Query: 2022 SSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANEEEMIEGFDND 2078
A + + + + + + + + E + TP L L E + + D
Sbjct: 2058 EKLTADQS-RSKLYDEESLLSLPMSQDGFPNEDGEQM-TPELLLLQERQRASEWPKD 2112
Score = 49 (22.3 bits), Expect = 2.1e-58, Sum P(5) = 2.1e-58
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSEN 975
P +KP E++ V S + + L H+ ++ S TP D+ SDT ++S +
Sbjct: 1958 PVEKPPEETAAQVPSLESLTLKLEHEVVAR-SRPTPQDY---DMRVAPSDTTPLVSRS 2011
Score = 48 (22.0 bits), Expect = 4.6e-58, Sum P(4) = 4.6e-58
Identities = 24/126 (19%), Positives = 54/126 (42%)
Query: 1245 KTEALKPENKAQAGRIEN--IANS--SPDDKSLPMVPNLETAP------PGFDIPIEKHN 1294
+T A P ++ ++E+ +A S +P D + + P+ +T P P + E +
Sbjct: 1965 ETAAQVPSLESLTLKLEHEVVARSRPTPQDYDMRVAPS-DTTPLVSRSVPPVKLEDEDDS 2023
Query: 1295 EQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAME 1354
+ + + + SS + +ST+ E EK ++ + + L ++ S+ + +
Sbjct: 2024 DSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLTADQSRSKLYDEESLLSLPMSQD 2083
Query: 1355 TAPGFD 1360
P D
Sbjct: 2084 GFPNED 2089
Score = 42 (19.8 bits), Expect = 8.1e-59, Sum P(5) = 8.1e-59
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R R++ S ++ + TE + E +C+A
Sbjct: 1410 YGWG-RWRDILSHGRFKRRMTERDVETICRA 1439
Score = 40 (19.1 bits), Expect = 8.7e-59, Sum P(4) = 8.7e-59
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 1714 GDKKADCKMEPDCLVASDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALL 1765
G++K ++E +C+ + ++++L R + + DG + + E P A L
Sbjct: 2243 GNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVG--EDAPRRAEL 2292
Score = 38 (18.4 bits), Expect = 8.1e-59, Sum P(5) = 8.1e-59
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEE 2357
GP + ++ G PVP A+ +A EE
Sbjct: 2147 GPGNHLLDSPSLTPGEYGDSPVPTPRSSSAASMAEEE 2183
Score = 38 (18.4 bits), Expect = 1.3e-58, Sum P(3) = 1.3e-58
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 646 GQSTSASASLPXXXXXXXXXXXAQHV 671
G S++ SASLP + HV
Sbjct: 2416 GHSSATSASLPFMPFVMGGAASSPHV 2441
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 624 (224.7 bits), Expect = 8.3e-59, Sum P(2) = 8.3e-59
Identities = 177/555 (31%), Positives = 274/555 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +I+DE HR+KN K L Y H+LLLT
Sbjct: 844 KFHVLLTSYELITI--DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT 901
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ E F + F D + + I
Sbjct: 902 GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----------IK 944
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 945 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGN 1004
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL + A E + Y ++R GKL +L ++L LK
Sbjct: 1005 QVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKE 1064
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1125 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI 1184
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXR 436
A+ K+ + + + G + T + ++E L+ +L+ EE
Sbjct: 1185 TQVAKKKMMLTHLVVRPGL-GSKTGSMSKQE-LDDILK-FGTEELFKDEATDGGGDNKEG 1241
Query: 437 SESEIDVFE--SVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMK 494
+S + ++ ++++ + T ++G+ + +V ++++ E +
Sbjct: 1242 EDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFK-VAQYVVREEEMGEEEEVER 1300
Query: 495 IYDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSYEEQWTEEEFEKMCQA 551
+ V P+ K H ++ G+GKR R+ +Y + E+ + Q+
Sbjct: 1301 EIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQS 1360
Query: 552 ES-SDSPKLKEEGLE 565
++ SD EEG E
Sbjct: 1361 DNQSDYSVASEEGDE 1375
Score = 85 (35.0 bits), Expect = 8.3e-59, Sum P(2) = 8.3e-59
Identities = 38/131 (29%), Positives = 59/131 (45%)
Query: 2300 SKPVGSEKESIASAVPLDES-KGPDAEVSSQTAIEGGGVVSIPVPE---EADGPASFLAA 2355
S P ++ + A A P ++ K + + + ++EG V PE E P + A+
Sbjct: 1544 STPGDTQPNTPAPAPPAEDGIKIEENSLKEEESVEGEKEVKSTAPEATVECTQPPA-PAS 1602
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVA-LENTSEGMGGPSPPLVIA 2414
E+EK E V V + E KE + EPM+ VA +E E P+V+
Sbjct: 1603 EDEKVLVEPPE-VEEKVEKAEVKE---RTEEPMETEPKGVADVEKVEEKSAVDLTPIVV- 1657
Query: 2415 EDKTENEIEED 2425
EDK E + EE+
Sbjct: 1658 EDKEEKKEEEE 1668
Score = 60 (26.2 bits), Expect = 1.2e-53, Sum P(4) = 1.2e-53
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 1829 LQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEE 1887
+++K +AE+ +R +EP P+ GV D V++ + V +P+ V ++E+ +E
Sbjct: 1614 VEEKVEKAEVKERTEEPMET--EPK---GVAD--VEKVEEKSAVDLTPIVVEDKEEKKE 1665
Score = 55 (24.4 bits), Expect = 5.0e-54, Sum P(3) = 5.0e-54
Identities = 35/134 (26%), Positives = 52/134 (38%)
Query: 1960 GS-SEKDPVSSQSVLEGSKETVAEAGDQMD-ISIMPEKLPEHLDIPASLATPEEKTEGSE 2017
GS S K P S + T A A D I I L E + E +
Sbjct: 1534 GSPSPKTPTPSTPG-DTQPNTPAPAPPAEDGIKIEENSLKEEESVEGEKEVKSTAPEATV 1592
Query: 2018 KDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANEEEMIEGFDN 2077
+ A ED E V+ ++ + A V E++ E + T P +A+ E++ E
Sbjct: 1593 ECTQPPAPASED--EKVLVEPPEVEEKVEKAEVKERTEEPMETEPKGVADVEKVEEKSAV 1650
Query: 2078 DPTGISMAVMDSKE 2091
D T I V++ KE
Sbjct: 1651 DLTPI---VVEDKE 1661
Score = 54 (24.1 bits), Expect = 6.3e-54, Sum P(3) = 6.3e-54
Identities = 35/146 (23%), Positives = 56/146 (38%)
Query: 1186 EVAKKQSSDDKTCSVTPTVETPPPGF-NSPNENPGELTGTKNDASVRGDHTPVSGHTLAS 1244
E KK S TPT TP N+P P G K + + + V G
Sbjct: 1525 EENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAEDGIKIEENSLKEEESVEGE---K 1581
Query: 1245 KTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNE--QSRNQNN 1302
+ ++ PE + + A +S D+K L P +E ++ E+ E ++ +
Sbjct: 1582 EVKSTAPEATVEC--TQPPAPASEDEKVLVEPPEVEEKVEKAEVK-ERTEEPMETEPKGV 1638
Query: 1303 PEV-KGEETPVSSEAPASTEAFEQEK 1327
+V K EE P E E++K
Sbjct: 1639 ADVEKVEEKSAVDLTPIVVEDKEEKK 1664
Score = 43 (20.2 bits), Expect = 1.2e-53, Sum P(4) = 1.2e-53
Identities = 14/63 (22%), Positives = 24/63 (38%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSS 977
P+ E++ ++ Q P T + +TPA P + G + L E S
Sbjct: 1519 PELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAEDGIKIEENS--LKEEES 1576
Query: 978 SKG 980
+G
Sbjct: 1577 VEG 1579
Score = 40 (19.1 bits), Expect = 5.0e-54, Sum P(3) = 5.0e-54
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 2171 ETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDG 2213
E +EEEK E+ + ++DE + ++ ++ DG
Sbjct: 1662 EKKEEEEKKEVMLQNGETPKDLNDEKQKKNIKQRFMFNI-ADG 1703
Score = 40 (19.1 bits), Expect = 8.9e-53, Sum P(3) = 8.9e-53
Identities = 29/130 (22%), Positives = 47/130 (36%)
Query: 1216 ENPGELTGTKNDASVRGDHTPVSGH----TLASKTEALKPENKAQAG-RIENIANSSPDD 1270
E E+ T +A+V P L E + KA+ R E + P
Sbjct: 1578 EGEKEVKSTAPEATVECTQPPAPASEDEKVLVEPPEVEEKVEKAEVKERTEEPMETEP-- 1635
Query: 1271 KSLPMVPNLETAPPGFDI-PIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVT 1329
K + V +E D+ PI +++ + + E K E + E P +Q+K
Sbjct: 1636 KGVADVEKVEEKS-AVDLTPIVVEDKEEKKEE--EEKKEVMLQNGETPKDLNDEKQKKNI 1692
Query: 1330 NTSSFVNLAD 1339
N+AD
Sbjct: 1693 KQRFMFNIAD 1702
Score = 39 (18.8 bits), Expect = 1.1e-52, Sum P(3) = 1.1e-52
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 2168 VVAETVQEEEKTELSCEKQPIGSSVDDESKG-PEVE 2202
V+ E + EEK E + K+ ++ E KG +VE
Sbjct: 1607 VLVEPPEVEEKVEKAEVKERTEEPMETEPKGVADVE 1642
Score = 37 (18.1 bits), Expect = 9.4e-54, Sum P(2) = 9.4e-54
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 2399 NTSEGMGGPSPPLVIAEDKTENEIEEDPVVNSVAVEESK 2437
+T P+PP AED + IEE+ + +VE K
Sbjct: 1548 DTQPNTPAPAPP---AEDGIK--IEENSLKEEESVEGEK 1581
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 624 (224.7 bits), Expect = 8.6e-59, Sum P(2) = 8.6e-59
Identities = 177/555 (31%), Positives = 274/555 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +I+DE HR+KN K L Y H+LLLT
Sbjct: 864 KFHVLLTSYELITI--DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT 921
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ E F + F D + + I
Sbjct: 922 GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----------IK 964
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 965 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGN 1024
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL + A E + Y ++R GKL +L ++L LK
Sbjct: 1025 QVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKE 1084
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1085 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1144
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1145 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI 1204
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXR 436
A+ K+ + + + G + T + ++E L+ +L+ EE
Sbjct: 1205 TQVAKKKMMLTHLVVRPGL-GSKTGSMSKQE-LDDILK-FGTEELFKDEATDGGGDNKEG 1261
Query: 437 SESEIDVFE--SVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMK 494
+S + ++ ++++ + T ++G+ + +V ++++ E +
Sbjct: 1262 EDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFK-VAQYVVREEEMGEEEEVER 1320
Query: 495 IYDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSYEEQWTEEEFEKMCQA 551
+ V P+ K H ++ G+GKR R+ +Y + E+ + Q+
Sbjct: 1321 EIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQS 1380
Query: 552 ES-SDSPKLKEEGLE 565
++ SD EEG E
Sbjct: 1381 DNQSDYSVASEEGDE 1395
Score = 85 (35.0 bits), Expect = 8.6e-59, Sum P(2) = 8.6e-59
Identities = 38/131 (29%), Positives = 59/131 (45%)
Query: 2300 SKPVGSEKESIASAVPLDES-KGPDAEVSSQTAIEGGGVVSIPVPE---EADGPASFLAA 2355
S P ++ + A A P ++ K + + + ++EG V PE E P + A+
Sbjct: 1564 STPGDTQPNTPAPAPPAEDGIKIEENSLKEEESVEGEKEVKSTAPEATVECTQPPA-PAS 1622
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVA-LENTSEGMGGPSPPLVIA 2414
E+EK E V V + E KE + EPM+ VA +E E P+V+
Sbjct: 1623 EDEKVLVEPPE-VEEKVEKAEVKE---RTEEPMETEPKGVADVEKVEEKSAVDLTPIVV- 1677
Query: 2415 EDKTENEIEED 2425
EDK E + EE+
Sbjct: 1678 EDKEEKKEEEE 1688
Score = 60 (26.2 bits), Expect = 1.2e-53, Sum P(4) = 1.2e-53
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 1829 LQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEE 1887
+++K +AE+ +R +EP P+ GV D V++ + V +P+ V ++E+ +E
Sbjct: 1634 VEEKVEKAEVKERTEEPMET--EPK---GVAD--VEKVEEKSAVDLTPIVVEDKEEKKE 1685
Score = 55 (24.4 bits), Expect = 5.3e-54, Sum P(3) = 5.3e-54
Identities = 35/134 (26%), Positives = 52/134 (38%)
Query: 1960 GS-SEKDPVSSQSVLEGSKETVAEAGDQMD-ISIMPEKLPEHLDIPASLATPEEKTEGSE 2017
GS S K P S + T A A D I I L E + E +
Sbjct: 1554 GSPSPKTPTPSTPG-DTQPNTPAPAPPAEDGIKIEENSLKEEESVEGEKEVKSTAPEATV 1612
Query: 2018 KDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANEEEMIEGFDN 2077
+ A ED E V+ ++ + A V E++ E + T P +A+ E++ E
Sbjct: 1613 ECTQPPAPASED--EKVLVEPPEVEEKVEKAEVKERTEEPMETEPKGVADVEKVEEKSAV 1670
Query: 2078 DPTGISMAVMDSKE 2091
D T I V++ KE
Sbjct: 1671 DLTPI---VVEDKE 1681
Score = 54 (24.1 bits), Expect = 6.7e-54, Sum P(3) = 6.7e-54
Identities = 35/146 (23%), Positives = 56/146 (38%)
Query: 1186 EVAKKQSSDDKTCSVTPTVETPPPGF-NSPNENPGELTGTKNDASVRGDHTPVSGHTLAS 1244
E KK S TPT TP N+P P G K + + + V G
Sbjct: 1545 EENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAEDGIKIEENSLKEEESVEGE---K 1601
Query: 1245 KTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNE--QSRNQNN 1302
+ ++ PE + + A +S D+K L P +E ++ E+ E ++ +
Sbjct: 1602 EVKSTAPEATVEC--TQPPAPASEDEKVLVEPPEVEEKVEKAEVK-ERTEEPMETEPKGV 1658
Query: 1303 PEV-KGEETPVSSEAPASTEAFEQEK 1327
+V K EE P E E++K
Sbjct: 1659 ADVEKVEEKSAVDLTPIVVEDKEEKK 1684
Score = 43 (20.2 bits), Expect = 1.2e-53, Sum P(4) = 1.2e-53
Identities = 14/63 (22%), Positives = 24/63 (38%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSS 977
P+ E++ ++ Q P T + +TPA P + G + L E S
Sbjct: 1539 PELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAEDGIKIEENS--LKEEES 1596
Query: 978 SKG 980
+G
Sbjct: 1597 VEG 1599
Score = 40 (19.1 bits), Expect = 5.3e-54, Sum P(3) = 5.3e-54
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 2171 ETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDG 2213
E +EEEK E+ + ++DE + ++ ++ DG
Sbjct: 1682 EKKEEEEKKEVMLQNGETPKDLNDEKQKKNIKQRFMFNI-ADG 1723
Score = 40 (19.1 bits), Expect = 9.4e-53, Sum P(3) = 9.4e-53
Identities = 29/130 (22%), Positives = 47/130 (36%)
Query: 1216 ENPGELTGTKNDASVRGDHTPVSGH----TLASKTEALKPENKAQAG-RIENIANSSPDD 1270
E E+ T +A+V P L E + KA+ R E + P
Sbjct: 1598 EGEKEVKSTAPEATVECTQPPAPASEDEKVLVEPPEVEEKVEKAEVKERTEEPMETEP-- 1655
Query: 1271 KSLPMVPNLETAPPGFDI-PIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVT 1329
K + V +E D+ PI +++ + + E K E + E P +Q+K
Sbjct: 1656 KGVADVEKVEEKS-AVDLTPIVVEDKEEKKEE--EEKKEVMLQNGETPKDLNDEKQKKNI 1712
Query: 1330 NTSSFVNLAD 1339
N+AD
Sbjct: 1713 KQRFMFNIAD 1722
Score = 39 (18.8 bits), Expect = 1.2e-52, Sum P(3) = 1.2e-52
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 2168 VVAETVQEEEKTELSCEKQPIGSSVDDESKG-PEVE 2202
V+ E + EEK E + K+ ++ E KG +VE
Sbjct: 1627 VLVEPPEVEEKVEKAEVKERTEEPMETEPKGVADVE 1662
Score = 37 (18.1 bits), Expect = 9.7e-54, Sum P(2) = 9.7e-54
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 2399 NTSEGMGGPSPPLVIAEDKTENEIEEDPVVNSVAVEESK 2437
+T P+PP AED + IEE+ + +VE K
Sbjct: 1568 DTQPNTPAPAPP---AEDGIK--IEENSLKEEESVEGEK 1601
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 687 (246.9 bits), Expect = 8.9e-59, Sum P(5) = 8.9e-59
Identities = 168/412 (40%), Positives = 233/412 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 919 KFDALITTFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 976
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S +F + F GD + +
Sbjct: 977 GTPLQNTVEELFSLLHFLEPSQFPSESEFLKDF-------GDLKTEEQ----------VQ 1019
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 1020 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHT 1079
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEE-VDT-------LIPKHY-LPPIVRLCGKLEML 247
+ N++MELR CNHPYL AEE + T +IP + L +VR GKL ++
Sbjct: 1080 NMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLI 1139
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++
Sbjct: 1140 DKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKP 1199
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 1200 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLI 1259
Query: 368 TVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAED-RREYLESLLRE 415
T + E ++ A KLG+ QS++ G N T + ++ +E LLR+
Sbjct: 1260 TRNSYEREMFDKASLKLGLDKAVLQSMS-GRDGNITGIQQFSKKEIEDLLRK 1310
Score = 54 (24.1 bits), Expect = 8.9e-59, Sum P(5) = 8.9e-59
Identities = 23/125 (18%), Positives = 51/125 (40%)
Query: 1954 WEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKT 2013
+E ++ S+ P+ S+SV E ++ ++D+S KL +S ++ T
Sbjct: 2042 YEMRV-APSDTTPLVSRSVPPVKLEDEDDSDSELDLS----KLSPSSSSSSSSSSSSSST 2096
Query: 2014 EGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANEEEMIE 2073
+ SE + + A + + + + +++ + E + TP L L E +
Sbjct: 2097 DESEDEKEEKLTADRS-RSKLYDEESLLSLTMSQDGFPNEDGEQM-TPELLLLQERQRAS 2154
Query: 2074 GFDND 2078
+ D
Sbjct: 2155 EWPKD 2159
Score = 53 (23.7 bits), Expect = 8.9e-59, Sum P(5) = 8.9e-59
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 1416 DDHSLVKELIHRSPDH-SDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVA 1474
DD ++ E HR D+ SD+V G ED PL+ P + EG + M ++++
Sbjct: 1665 DDKAIAAE--HRVLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEIS 1722
Score = 53 (23.7 bits), Expect = 2.5e-57, Sum P(5) = 2.5e-57
Identities = 25/126 (19%), Positives = 55/126 (43%)
Query: 1245 KTEALKPENKAQAGRIEN--IANS--SPDDKSLPMVPNLETAP------PGFDIPIEKHN 1294
+T A P ++ ++E+ +A S +P D + + P+ +T P P + E +
Sbjct: 2012 ETAAQVPSLESLTLKLEHEVVARSRPTPQDYEMRVAPS-DTTPLVSRSVPPVKLEDEDDS 2070
Query: 1295 EQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAME 1354
+ + + + SS + +ST+ E EK ++ + + L ++ S+T + +
Sbjct: 2071 DSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLTADRSRSKLYDEESLLSLTMSQD 2130
Query: 1355 TAPGFD 1360
P D
Sbjct: 2131 GFPNED 2136
Score = 45 (20.9 bits), Expect = 1.7e-56, Sum P(5) = 1.7e-56
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSEN 975
P +KP E++ V S + + L H+ ++ S TP ++ SDT ++S +
Sbjct: 2005 PVEKPPEETAAQVPSLESLTLKLEHEVVAR-SRPTPQDY---EMRVAPSDTTPLVSRS 2058
Score = 42 (19.8 bits), Expect = 8.9e-59, Sum P(5) = 8.9e-59
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R R++ S ++ + TE + E +C+A
Sbjct: 1457 YGWG-RWRDILSHGRFKRRMTERDVETICRA 1486
Score = 40 (19.1 bits), Expect = 2.5e-57, Sum P(5) = 2.5e-57
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 1714 GDKKADCKMEPDCLVASDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALL 1765
G++K ++E +C+ + ++++L R + + DG + + E P A L
Sbjct: 2290 GNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVG--EDAPRRAEL 2339
Score = 38 (18.4 bits), Expect = 9.6e-58, Sum P(6) = 9.6e-58
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEE 2357
GP + ++ G PVP A+ +A EE
Sbjct: 2194 GPGNHLLDSPSLTPGEYGDSPVPTPRSSSAASMAEEE 2230
Score = 38 (18.4 bits), Expect = 7.0e-57, Sum P(4) = 7.0e-57
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 646 GQSTSASASLPXXXXXXXXXXXAQHV 671
G S++ SASLP + HV
Sbjct: 2463 GHSSATSASLPFMPFVMGGAASSPHV 2488
Score = 37 (18.1 bits), Expect = 8.9e-59, Sum P(5) = 8.9e-59
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 2398 ENTSEGMGGPSPPLVIAEDKTENEIEEDPV 2427
E + GM GP L+ + T E + PV
Sbjct: 2186 EMVTGGMLGPGNHLLDSPSLTPGEYGDSPV 2215
Score = 37 (18.1 bits), Expect = 9.6e-58, Sum P(6) = 9.6e-58
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 2400 TSEGMGGPSPPLVIAEDKTENEIEED 2425
T+ G PPL ED+ + + ++D
Sbjct: 2525 TTSGTALRLPPLQPEEDEDDEDEDDD 2550
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 656 (236.0 bits), Expect = 1.1e-58, Sum P(5) = 1.1e-58
Identities = 158/410 (38%), Positives = 223/410 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 1065 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 1122
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1123 GTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF-------GDLKTEEQ----------VQ 1165
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 1166 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQA 1225
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ + P L +++ GKL ++D
Sbjct: 1226 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKDAHNADSPDFQLQAMIQAAGKLVLID 1285
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1286 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1345
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1346 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1405
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
+ E ++ A KLG+ QS++ N + ++ +E LLR+
Sbjct: 1406 RNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRK 1455
Score = 79 (32.9 bits), Expect = 1.1e-58, Sum P(5) = 1.1e-58
Identities = 40/182 (21%), Positives = 67/182 (36%)
Query: 2210 RGDGIVPETVPEELGLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAE 2269
RG VP +G +P V+ + E ++ + E
Sbjct: 2124 RGASTVPSLNTLAMGFGQAPPVIASAHAHEEKVMEQAEGKAEECEHSPAKERSDGKEEEE 2183
Query: 2270 GGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQ 2329
G + + Q+ SS E + +EG P GS+ S + +E K D + S +
Sbjct: 2184 EAGGAKDS-RQECEAEASSVKGELKGVEGSGDP-GSKSVSEKGSEEDEEEKLEDDDKSEE 2241
Query: 2330 TAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMD 2389
++ G VS + + AS A +E + E SV+Q+ + A +F P D
Sbjct: 2242 SSQPEAGAVSRGKTFDEESNASMSTARDETRDGFYMEDGDPSVAQLLHERTFAFSFWPKD 2301
Query: 2390 VV 2391
V
Sbjct: 2302 RV 2303
Score = 55 (24.4 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 43/209 (20%), Positives = 77/209 (36%)
Query: 2208 DVRGDG-IVPETVPEELGLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNII 2266
D +G ++P +P GLP+ V + + S+G + +
Sbjct: 2776 DAKGPAAVLPLMLPGMAGLPN----VFGLGGLLNNPLSAATGNTTTASSQGEPEDGTSKA 2831
Query: 2267 DAEGGGNMRQTVPQDLGLP-LSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAE 2325
+ +G N + + +S++D + + P +A L + P
Sbjct: 2832 EEKGNDNEDENRDSEKSTDAVSAADSANGSVGAATAPAALPSNPLAFNPFLLSTMAPGLF 2891
Query: 2326 VSSQTAIEGGGVVSIP-VP-----EEADGPASFLAAEE-EKNECSDKEPV-GSSVSQ--- 2374
S G G +++P P + A G + AA++ E C D E + GS +
Sbjct: 2892 YPSMFLPPGLGGLTLPGFPALAGLQNAVGASEEKAADKAEGGPCKDGETLEGSDAEENLD 2951
Query: 2375 --IESK--EPEAKAFEPMDVVDGAVALEN 2399
IES E E E +D ++G +EN
Sbjct: 2952 KTIESSILEDEVAQGEELDSLEGGDEIEN 2980
Score = 55 (24.4 bits), Expect = 4.3e-55, Sum P(5) = 4.3e-55
Identities = 27/118 (22%), Positives = 43/118 (36%)
Query: 1266 SSPDDKSLPMVPNLETAPPGFDI--PI--EKHNEQSRNQNNPEVKGEETPVSSEAPASTE 1321
S ++ VP+L T GF P+ H + + E K EE S S
Sbjct: 2119 SFAQNRGASTVPSLNTLAMGFGQAPPVIASAHAHEEKVMEQAEGKAEECEHSPAKERSDG 2178
Query: 1322 AFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVK 1379
E+E+ + + + SV ++ G P K V + G+E D + K
Sbjct: 2179 KEEEEEAGGAKD----SRQECEAEASSVKGELKGVEGSGDPGSKSVSEKGSEEDEEEK 2232
Score = 54 (24.1 bits), Expect = 1.1e-58, Sum P(5) = 1.1e-58
Identities = 21/81 (25%), Positives = 34/81 (41%)
Query: 2144 VTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEP 2203
V + D+K AE +L GG E +E+E E + P +D+ + P +
Sbjct: 1810 VGMPDAKAIAAEQRGT-DMLADGGDGGEFDREDEDPEYKPTRAPFKDEIDEFANSPPEDK 1868
Query: 2204 CVQMDVRGDGIVPETVPEELG 2224
M+ + G E+ ELG
Sbjct: 1869 EDSMEAQSTGKHSES-NAELG 1888
Score = 52 (23.4 bits), Expect = 6.4e-56, Sum P(5) = 6.4e-56
Identities = 28/101 (27%), Positives = 39/101 (38%)
Query: 2342 VPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESK-EPEAKAFEPMDVVDGAVALENT 2400
V E+A+G A K KE + +S+ E EA+A + G
Sbjct: 2156 VMEQAEGKAEECEHSPAKERSDGKEEEEEAGGAKDSRQECEAEASSVKGELKGV------ 2209
Query: 2401 SEGMGGPSPPLVIAEDKTENEIEEDPVVNSVAVEESKGSEA 2441
EG G P V +K E EE+ + + EES EA
Sbjct: 2210 -EGSGDPGSKSV--SEKGSEEDEEEKLEDDDKSEESSQPEA 2247
Score = 51 (23.0 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 52/248 (20%), Positives = 92/248 (37%)
Query: 700 STPMQPKGRGRRIQ-SGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPS 758
S P Q + R R+++ E+ +RR + +V + S N Q + L+ +
Sbjct: 2383 SVPRQRRRRRRKVEIEAERAAKRRNL-MEMVAQLRESQVVSE------NGQEKVVDLSKA 2435
Query: 759 GGESTATDGNVSSIPTAPVPDSVS-P--SAVKGQSGTIDPSSAVAALNSELNTNLATAX- 814
E+T++ N SS+ + + +VS P A K Q + + LN +L
Sbjct: 2436 SREATSSTSNFSSLTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHVLNGSLVDGEP 2495
Query: 815 ---XXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDV-SAGP-ESKS 869
+ R S + + + +PPI ++ S G + +
Sbjct: 2496 PMKRRRGRRKNVEGLDLLFMSHKRTPLSAEDAEVTKAFEEDIETPPIRNIPSPGQLDPDT 2555
Query: 870 NLQSENNSGGLRLSKSVSMGKQDALSQ-ELSNKIQVQ-PCGVATSADVA-GPDQKPAEQS 926
+ N G RL + +D + +L V P V +ADV P QKP ++
Sbjct: 2556 RIPVINLEDGTRLVGEEAPKNKDLVDWLKLHPMYTVDMPSYVPKNADVLFSPFQKPKQKR 2615
Query: 927 VRVVQSNQ 934
R N+
Sbjct: 2616 HRCRNPNK 2623
Score = 49 (22.3 bits), Expect = 2.8e-54, Sum P(6) = 2.8e-54
Identities = 48/232 (20%), Positives = 80/232 (34%)
Query: 1689 ATSCDTASLDDSHDNGNVEVLCGGTGDKKADCKMEPDCLVAS-DSVNMELVPRDFGVGRR 1747
A C+ + + D E GG D + +C+ E + V P V +
Sbjct: 2164 AEECEHSPAKERSDGKEEEEEAGGAKDSRQECEAEASSVKGELKGVEGSGDPGSKSVSEK 2223
Query: 1748 DGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHK 1807
+ + + SS + A + DE + D G + E
Sbjct: 2224 GSEEDEEEKLEDDDKSEESSQPE--AGAVSRGKTFDEESNASMSTARDETRDGFYM-EDG 2280
Query: 1808 SENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAG 1867
++ + + E F S +D+ + D I E + G P + ++ D G
Sbjct: 2281 DPSVAQ---LLHERTFAFSFWPKDRVMINRL-DNICEAVLKGKWPINRR----QMFDFQG 2332
Query: 1868 DHMGVSHSPVHVVEREKS-EELGLPSLSSATKEEKIDGS--LDKDPDSNLVV 1916
G S V +++S EL + S +S + E I S L KD NL V
Sbjct: 2333 LVPGYPPSTVDSPLQKRSFAELSMVSQASVSASEDITTSPQLSKDDALNLSV 2384
Score = 47 (21.6 bits), Expect = 4.5e-54, Sum P(6) = 4.5e-54
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 2000 LDIPASLATPEEKTEGSEKDP-DSSFAAQEDPKESVVEAGD-QMGVSLGGATVMEKSSED 2057
L+ P S AT T S+ +P D + A+E ++ E D + A S
Sbjct: 2804 LNNPLSAATGNTTTASSQGEPEDGTSKAEEKGNDNEDENRDSEKSTDAVSAADSANGSVG 2863
Query: 2058 LATPPLSL 2065
AT P +L
Sbjct: 2864 AATAPAAL 2871
Score = 46 (21.3 bits), Expect = 1.1e-58, Sum P(5) = 1.1e-58
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 1777 KADVVLDEHGKVQLLPGADNPEGGVIVPE 1805
+ +V+ D+ K+ L GAD+ E V +PE
Sbjct: 1738 RQEVIGDQAEKI--LEGADSSEADVWIPE 1764
Score = 46 (21.3 bits), Expect = 4.3e-55, Sum P(5) = 4.3e-55
Identities = 43/176 (24%), Positives = 67/176 (38%)
Query: 1889 GLPSLSSATKEEKIDGSLDKDPDS----NLVVLEDS-KGSIGDQMDCCQSGVVVPENLSD 1943
G P ++ EEK + + D++ DS + V DS GS+G + +P N
Sbjct: 2822 GEPEDGTSKAEEKGNDNEDENRDSEKSTDAVSAADSANGSVG----AATAPAALPSNPLA 2877
Query: 1944 FCQPS--SSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLD 2001
F P S++AP S P L G A AG Q + EK + +
Sbjct: 2878 F-NPFLLSTMAP--GLFYPSMFLPPGLGGLTLPGFP---ALAGLQNAVGASEEKAADKAE 2931
Query: 2002 IPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSED 2057
E EGS+ + + + E V G+++ SL G +E + D
Sbjct: 2932 --GGPCKDGETLEGSDAEENLDKTIESSILEDEVAQGEELD-SLEGGDEIENNGND 2984
Score = 45 (20.9 bits), Expect = 7.1e-54, Sum P(6) = 7.1e-54
Identities = 24/108 (22%), Positives = 42/108 (38%)
Query: 851 QALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSN-KIQVQPCGV 909
QA G + S E + E +GG + S+ + ++ EL + P
Sbjct: 2159 QAEGKAEECEHSPAKERSDGKEEEEEAGGAKDSRQECEAEASSVKGELKGVEGSGDPGSK 2218
Query: 910 ATSADVAGPDQKPA-EQSVRVVQSNQP----INLPATHDSSSQPSGST 952
+ S + D++ E + +S+QP ++ T D S S ST
Sbjct: 2219 SVSEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKTFDEESNASMST 2266
Score = 43 (20.2 bits), Expect = 1.1e-58, Sum P(5) = 1.1e-58
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R ++ S Y+ Q TE + E +C+A
Sbjct: 1605 YGWG-RWTDILSHGRYKRQLTEHDVETICRA 1634
Score = 43 (20.2 bits), Expect = 4.3e-55, Sum P(5) = 4.3e-55
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 1250 KPENKAQAGRIENIANSSPDDK 1271
KP I+ ANS P+DK
Sbjct: 1847 KPTRAPFKDEIDEFANSPPEDK 1868
Score = 43 (20.2 bits), Expect = 1.1e-54, Sum P(5) = 1.1e-54
Identities = 22/77 (28%), Positives = 30/77 (38%)
Query: 670 HVMVGI-APSSQPTTA---FVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQ-VP---RR 721
H M + PS P A F P Q C + P +GE+ VP +R
Sbjct: 2586 HPMYTVDMPSYVPKNADVLFSPFQKPKQKRHRCRN----PNKLDINTLTGEERVPVVNKR 2641
Query: 722 RGKKIGLVLPAASDDIP 738
GKK+G + D+P
Sbjct: 2642 NGKKMGGAMAPPMKDLP 2658
Score = 43 (20.2 bits), Expect = 7.1e-54, Sum P(6) = 7.1e-54
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 1308 EETPVSSEAPASTEAFEQE 1326
+ TP+S+E T+AFE++
Sbjct: 2518 KRTPLSAEDAEVTKAFEED 2536
Score = 42 (19.8 bits), Expect = 1.1e-54, Sum P(5) = 1.1e-54
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 846 RRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQ 905
RRG+R P S+++ + + + S + L L S+ G Q L N +Q
Sbjct: 2704 RRGRR------PKSEIARAAAAAAAVASTSGINPL-LVNSLFAGMDLTSLQNLQNLQSLQ 2756
Query: 906 -------PCGVATSADVAGPDQKPA 923
P G+AT+A G + PA
Sbjct: 2757 LAGLMGFPPGLATAATAGGDAKGPA 2781
Score = 40 (19.1 bits), Expect = 1.3e-53, Sum P(4) = 1.3e-53
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKN 2360
G AE + A V IP P A+ PA + E +K+
Sbjct: 1743 GDQAEKILEGADSSEADVWIPEPFHAEVPADWWDKEADKS 1782
Score = 39 (18.8 bits), Expect = 2.3e-54, Sum P(5) = 2.3e-54
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1562 KSIGGPIVSMKAADVADADHPLETAVE 1588
K+ GGP + + +DA+ L+ +E
Sbjct: 2929 KAEGGPCKDGETLEGSDAEENLDKTIE 2955
Score = 38 (18.4 bits), Expect = 6.8e-55, Sum P(6) = 6.8e-55
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 2043 VSLGGATVMEKSSEDLATPPL 2063
+S A V + ED+ TPP+
Sbjct: 2522 LSAEDAEVTKAFEEDIETPPI 2542
Score = 38 (18.4 bits), Expect = 6.8e-55, Sum P(6) = 6.8e-55
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1904 GSLDKDPDSNLVVLEDSKGSIGDQ 1927
G LD D ++ LED +G++
Sbjct: 2549 GQLDPDTRIPVINLEDGTRLVGEE 2572
Score = 38 (18.4 bits), Expect = 1.8e-54, Sum P(5) = 1.8e-54
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 2404 MG-GPSPPLVIA----EDKTENEIE--EDPVVNSVAVEESKGSEAD 2442
MG G +PP++ + E+K + E + +S A E S G E +
Sbjct: 2137 MGFGQAPPVIASAHAHEEKVMEQAEGKAEECEHSPAKERSDGKEEE 2182
Score = 38 (18.4 bits), Expect = 2.9e-54, Sum P(5) = 2.9e-54
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 1680 GIALDKTEIAT-SCDTASLDDSHDNGNVEVLCGGTG--DKKADCKMEPDCLVASDSVN 1734
G+ + AT + TAS ++G + G D+ D + D + A+DS N
Sbjct: 2802 GLLNNPLSAATGNTTTASSQGEPEDGTSKAEEKGNDNEDENRDSEKSTDAVSAADSAN 2859
Score = 37 (18.1 bits), Expect = 6.0e-57, Sum P(5) = 6.0e-57
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 1941 LSD---FCQPSSSLAPW 1954
LSD CQPS L W
Sbjct: 2063 LSDRLKLCQPSLDLPEW 2079
Score = 37 (18.1 bits), Expect = 2.8e-54, Sum P(6) = 2.8e-54
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 1005 KACTNASKSKATLPALDSITEPYTGSTNTEGISNTIHHV 1043
+ C +K + P L S+ EP T E S T++ +
Sbjct: 2013 RVCRMPAKPEDEPPDLASLIEPIT----EERASRTLYRI 2047
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 657 (236.3 bits), Expect = 1.1e-58, Sum P(5) = 1.1e-58
Identities = 159/410 (38%), Positives = 224/410 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 314 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 371
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 372 GTPLQNTVEELFSLLHFLEPGRFPSETTFMQEF-------GDLKTEEQ----------VQ 414
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 415 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQA 474
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTL---IPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ +T P L +++ GKL ++D
Sbjct: 475 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLID 534
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 535 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPD 594
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 595 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 654
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
+ E ++ A KLG+ QS++ N + ++ +E LLR+
Sbjct: 655 RNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRK 704
Score = 67 (28.6 bits), Expect = 1.1e-58, Sum P(5) = 1.1e-58
Identities = 35/178 (19%), Positives = 68/178 (38%)
Query: 1100 PSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADVNDVARVMKEIFSETCSSK 1159
P I + V + K + +++K GS+ + + K + + D+A K+ + C ++
Sbjct: 1394 PPIVPSTPVQEEKTTEQTESKVE---GSENPAAKEKSDIKEETDIAD--KDT-KQDCDAE 1447
Query: 1160 AKTGD-----SSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTC-SVTPTVETPPPGFNS 1213
A+TG + D + +K DDK+ S P G N
Sbjct: 1448 AETGSVKCELKDIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGAVSQGKNF 1507
Query: 1214 PNENPGELTGTKN---DASVRGDHTPVSGHTLASKTEALK--PENKAQAGRIENIANS 1266
E+ ++ ++ D D P L +T A P+++ R++NI +
Sbjct: 1508 DEESNASMSTARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEA 1565
Score = 57 (25.1 bits), Expect = 3.8e-57, Sum P(5) = 3.8e-57
Identities = 35/122 (28%), Positives = 53/122 (43%)
Query: 1808 SENMG--EKDDISSEHAFGSSLVLQDKASEAEIGD-RIDEPQVD---GFSPRSMSGVVDE 1861
SEN EK DI E QD +EAE G + + ++ P+S+S E
Sbjct: 1418 SENPAAKEKSDIKEETDIADKDTKQDCDAEAETGSVKCELKDIEMSTDVDPKSISEKGSE 1477
Query: 1862 LVDEA----GDHMGVSHSP-VHVVEREKS-EELGLPSLSSATKEEKIDGSLDKDPDSNLV 1915
+E D S P V + K+ +E S+S+A ++E DG +D D ++V
Sbjct: 1478 EDEEEKLDDDDKSEESSQPEAGAVSQGKNFDEESNASMSTA-RDETRDGFYMEDGDPSVV 1536
Query: 1916 VL 1917
L
Sbjct: 1537 QL 1538
Score = 56 (24.8 bits), Expect = 1.1e-58, Sum P(5) = 1.1e-58
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 1899 EEKIDGS-----LDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSD 1943
EE ++GS LDK DS+ +LED G+++D G + N +D
Sbjct: 2201 EENLEGSDAEESLDKTADSS--ILEDEIAQ-GEELDSLDGGEEIENNEND 2247
Score = 54 (24.1 bits), Expect = 8.3e-56, Sum P(5) = 8.3e-56
Identities = 44/186 (23%), Positives = 68/186 (36%)
Query: 2210 RGDG---IVPETVPEELGLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNII 2266
RG G V P G +P +V + S + G S+ P A+ + I
Sbjct: 1372 RGTGNANTVSSLHPVGAGCSQTPPIVPSTPVQEEKTTEQTESKV-EG-SENPAAKEKSDI 1429
Query: 2267 DAEGGGNMRQTVPQDLGLPLSSSDVE-EEKIEGFSKPVGSEKESIASAVPLDESKGPDAE 2325
E + T QD + V+ E K S V + S + +E K D +
Sbjct: 1430 KEETDIADKDT-KQDCDAEAETGSVKCELKDIEMSTDVDPKSISEKGSEEDEEEKLDDDD 1488
Query: 2326 VSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAF 2385
S +++ G VS + + AS A +E + E SV Q+ + A +F
Sbjct: 1489 KSEESSQPEAGAVSQGKNFDEESNASMSTARDETRDGFYMEDGDPSVVQLLHERTFAFSF 1548
Query: 2386 EPMDVV 2391
P D V
Sbjct: 1549 WPKDRV 1554
Score = 52 (23.4 bits), Expect = 1.2e-56, Sum P(5) = 1.2e-56
Identities = 27/109 (24%), Positives = 46/109 (42%)
Query: 1930 CCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSS-----EKDPVSSQSVLEGSKETV---- 1980
C Q+ +VP S Q + E+K++GS EK + ++ + K+T
Sbjct: 1390 CSQTPPIVP---STPVQEEKTTEQTESKVEGSENPAAKEKSDIKEETDI-ADKDTKQDCD 1445
Query: 1981 --AEAG----DQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSS 2023
AE G + DI + + P+ + S EEK + +K +SS
Sbjct: 1446 AEAETGSVKCELKDIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESS 1494
Score = 51 (23.0 bits), Expect = 3.5e-58, Sum P(5) = 3.5e-58
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 2344 EEADGPASFLAAEEEKN-ECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALEN 2399
E+A A ++E+N E SD E + E E E +D +DG +EN
Sbjct: 2187 EKATDKTEGTAFKDEENLEGSDAEESLDKTADSSILEDEIAQGEELDSLDGGEEIEN 2243
Score = 51 (23.0 bits), Expect = 9.8e-57, Sum P(5) = 9.8e-57
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 700 STPMQPKGRGRRIQ-SGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPS 758
S P Q + R R+I+ E+ +RR + +V + S N Q + L+ +
Sbjct: 1634 SVPRQRRRRRRKIEIEAERAAKRRNL-MEMVAQLRESQVVSE------NGQEKVVDLSKA 1686
Query: 759 GGESTATDGNVSSIPTAPVPDSVS 782
E+T++ N SS+ + + +VS
Sbjct: 1687 SREATSSTSNFSSVTSKFILPNVS 1710
Score = 50 (22.7 bits), Expect = 4.5e-58, Sum P(5) = 4.5e-58
Identities = 19/77 (24%), Positives = 31/77 (40%)
Query: 1981 AEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ 2040
A AG Q + EK + + + EE EGS+ + A E + G++
Sbjct: 2174 ALAGLQNAVGSNEEKATDKTE--GTAFKDEENLEGSDAEESLDKTADSSILEDEIAQGEE 2231
Query: 2041 MGVSLGGATVMEKSSED 2057
+ SL G +E + D
Sbjct: 2232 LD-SLDGGEEIENNEND 2247
Score = 50 (22.7 bits), Expect = 6.1e-57, Sum P(5) = 6.1e-57
Identities = 21/101 (20%), Positives = 46/101 (45%)
Query: 1280 ETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNL-A 1338
+T P P+++ E++ Q +V+G E P + E ++ E+ + + + + A
Sbjct: 1392 QTPPIVPSTPVQE--EKTTEQTESKVEGSENPAAKE---KSDIKEETDIADKDTKQDCDA 1446
Query: 1339 DLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVK 1379
+ + C + +E + D P K + + G+E D + K
Sbjct: 1447 EAETGSVKCELKD-IEMSTDVD-P--KSISEKGSEEDEEEK 1483
Score = 48 (22.0 bits), Expect = 1.1e-58, Sum P(5) = 1.1e-58
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 1310 TPVSSEAPASTEAFEQEKVTNTSSFVNLADLS-SDDKTCSVTPAMETAPGFDIPIEKGVE 1368
TP + ++P +F + S + A +S S+D T S + E A +P ++
Sbjct: 1589 TPTAVDSPLQKRSFAE------LSMIGQASISGSEDITASPQLSKEDALNLSVPRQRRRR 1642
Query: 1369 QSGTEIDAK 1377
+ EI+A+
Sbjct: 1643 RRKIEIEAE 1651
Score = 48 (22.0 bits), Expect = 3.8e-57, Sum P(5) = 3.8e-57
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1250 KPENKAQAGRIENIANSSPDDK--SLPMVPN 1278
KP I+ ANS P+DK S+ + PN
Sbjct: 1096 KPTRTPFKDEIDEFANSPPEDKEESIEIHPN 1126
Score = 48 (22.0 bits), Expect = 8.3e-56, Sum P(5) = 8.3e-56
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 2144 VTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGP 2199
V + D+K AE +L GG E +E+E E + P +D+ + P
Sbjct: 1059 VGMPDAKAIAAEQRGT-DMLADGGDGGEFDREDEDPEYKPTRTPFKDEIDEFANSP 1113
Score = 45 (20.9 bits), Expect = 1.5e-57, Sum P(5) = 1.5e-57
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 1397 FKPENKTDGDSVEKLEDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSED 1446
FK E +G E+ D D S++++ I + + + G N D
Sbjct: 2198 FKDEENLEGSDAEESLDKTADSSILEDEIAQGEELDSLDGGEEIENNEND 2247
Score = 45 (20.9 bits), Expect = 9.8e-57, Sum P(5) = 9.8e-57
Identities = 23/90 (25%), Positives = 36/90 (40%)
Query: 841 GVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSN 900
G R G + G P S+++ + + + S + L L S+ G Q L N
Sbjct: 1945 GPVVREEGASRR-GRRPKSEIAKAAAAAAAVASTSGINPL-LMNSLFAGMDLTSLQNLQN 2002
Query: 901 KIQVQ-------PCGVATSADVAGPDQKPA 923
+Q P G+AT+A G + PA
Sbjct: 2003 LQSLQLAGLMGFPPGLATAAAAGGDAKNPA 2032
Score = 45 (20.9 bits), Expect = 2.2e-55, Sum P(6) = 2.2e-55
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 687 PVAPG-SQSASACPSTPMQPKGRGRRIQS---GEQVPRRRGK 724
PV G SQ+ PSTP+Q + + +S G + P + K
Sbjct: 1385 PVGAGCSQTPPIVPSTPVQEEKTTEQTESKVEGSENPAAKEK 1426
Score = 42 (19.8 bits), Expect = 8.3e-56, Sum P(5) = 8.3e-56
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 716 EQVP---RRRGKKIGLVLPAASDDIP 738
E+VP +R GKK+G + D+P
Sbjct: 1884 ERVPVVNKRNGKKMGGAMAPPMKDLP 1909
Score = 41 (19.5 bits), Expect = 1.1e-58, Sum P(5) = 1.1e-58
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQ 550
YG G R ++ S Y+ Q TE++ E +C+
Sbjct: 854 YGWG-RWTDILSHGRYKRQLTEQDVETICR 882
Score = 41 (19.5 bits), Expect = 3.8e-57, Sum P(5) = 3.8e-57
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 1795 DNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRID 1843
D EG E EN+ D S S +L+D+ ++ E D +D
Sbjct: 2191 DKTEGTAFKDE---ENLEGSDAEESLDKTADSSILEDEIAQGEELDSLD 2236
Score = 41 (19.5 bits), Expect = 2.0e-56, Sum P(5) = 2.0e-56
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 1777 KADVVLDEHGKVQLLPGADNPEGGVIVPE 1805
+ +V+ D+ ++ L GAD+ E V +PE
Sbjct: 987 RQEVIGDQADRI--LEGADSSEVDVWIPE 1013
Score = 40 (19.1 bits), Expect = 2.2e-55, Sum P(6) = 2.2e-55
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 754 SLNPSGGEST-ATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNL 810
SL E T A + ++ ++P +P SP G +DP + + +N E T L
Sbjct: 1772 SLTVEDAEVTKAFEEDMEALPARNIP---SP-------GQLDPDTRIPVINLEDGTRL 1819
Score = 38 (18.4 bits), Expect = 4.1e-56, Sum P(5) = 4.1e-56
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 1296 QSRNQNNPEVKGEETPVSSEAPASTEAFEQEK 1327
+S ++ P K S+ A +E F EK
Sbjct: 818 ESDSEEKPSTKPRRPQDKSQGYARSECFRVEK 849
Score = 37 (18.1 bits), Expect = 5.2e-56, Sum P(5) = 5.2e-56
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 1295 EQSRNQNNPEVKGEETPVSSE 1315
E R +PE K TP E
Sbjct: 1085 EFDREDEDPEYKPTRTPFKDE 1105
Score = 37 (18.1 bits), Expect = 4.4e-55, Sum P(5) = 4.4e-55
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 1945 CQPSSSLAPW-EAKIDGSSEKD 1965
CQPS L W E G +KD
Sbjct: 1318 CQPSLDLPEWWEC---GKHDKD 1336
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 683 (245.5 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 165/411 (40%), Positives = 231/411 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 919 KFDALITTFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 976
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S +F + F GD + +
Sbjct: 977 GTPLQNTVEELFSLLHFLEPSQFPSESEFLKDF-------GDLKTEEQ----------VQ 1019
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 1020 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHT 1079
Query: 201 ----VHNSVMELRNICNHPYLSQ-------LHAEEVDTLIPKHY-LPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL + E +IP+ + L +VR GKL ++D
Sbjct: 1080 NMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLID 1139
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1140 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1199
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1200 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1259
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAED-RREYLESLLRE 415
+ E ++ A KLG+ QS++ G N T + ++ +E LLR+
Sbjct: 1260 RNSYEREMFDKASLKLGLDKAVLQSMS-GRDGNITGIQQFSKKEIEDLLRK 1309
Score = 52 (23.4 bits), Expect = 4.2e-58, Sum P(4) = 4.2e-58
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 1416 DDHSLVKELIHRSPDH-SDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVA 1474
DD ++ E HR D+ SD+V G ED PL+ P EG + M ++++
Sbjct: 1664 DDKAIAAE--HRVLDNFSDLVEGIDFDKDCEDPEYKPLQGPPKDPDDEGDPLMMMDEEIS 1721
Score = 51 (23.0 bits), Expect = 5.1e-58, Sum P(5) = 5.1e-58
Identities = 28/139 (20%), Positives = 56/139 (40%)
Query: 1941 LSDFCQPSSSLAPWEAKID-GSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEH 1999
L D S L P + +I SS+ P+S +SV E ++ ++D+S KL
Sbjct: 2026 LEDEVVARSRLTPQDYEIRVASSDTAPLS-RSVPPVKLEDDDDSDSELDLS----KLSPS 2080
Query: 2000 LDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLA 2059
+S ++ ++ SE + + A + + + + +++ + E +
Sbjct: 2081 SSSSSSSSSSSSSSDESEDEKEEKLTADRS-RPKLYDEESLLSLTMSQDGFPNEDGEQM- 2138
Query: 2060 TPPLSLANEEEMIEGFDND 2078
TP L L E + + D
Sbjct: 2139 TPELLLLQERQRASEWPKD 2157
Score = 43 (20.2 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 1260 IENIANSSPDDKSLPMVPNL---ETAPPGFDIPIEKHNEQSR---NQNNPEVKGEETPVS 1313
+ ++ +SS SLP +P + APP D H+ + ++ G T
Sbjct: 2457 VSSLGHSSATSASLPFMPFVMGGAAAPPHVDSSTMLHHHHHHPHPHHHHHHHPGLRTTGY 2516
Query: 1314 SEAPAST 1320
+PA+T
Sbjct: 2517 PSSPATT 2523
Score = 43 (20.2 bits), Expect = 4.6e-57, Sum P(4) = 4.6e-57
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 2279 PQDLGLPLSSSDVEEEKIEGFSKPV 2303
P D G PL D E I+G PV
Sbjct: 1706 PDDEGDPLMMMDEEISVIDGDEAPV 1730
Score = 43 (20.2 bits), Expect = 1.2e-55, Sum P(5) = 1.2e-55
Identities = 38/185 (20%), Positives = 65/185 (35%)
Query: 1283 PPGFDIP-----IEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNL 1337
PPG ++P + E R V + + + S A + N + +
Sbjct: 1915 PPGLELPKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGASA 1974
Query: 1338 ADLSSDD-----KTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVA 1392
A LS + C+ A + D+P EK E++ ++ + + L E +
Sbjct: 1975 ASLSRCSTPLLHQQCTSRTASPSPLRPDVPAEKSPEENAVQVPS-LDSLTLKLEDEVVAR 2033
Query: 1393 G--------IEVFKPENKTDGDSVE--KLEDTVDDHSLVKELIHRSPDHSDMVIGNVPGN 1442
I V + SV KLED DD +L SP S + +
Sbjct: 2034 SRLTPQDYEIRVASSDTAPLSRSVPPVKLEDD-DDSDSELDLSKLSPSSSSSSSSSSSSS 2092
Query: 1443 TSEDS 1447
+S++S
Sbjct: 2093 SSDES 2097
Score = 42 (19.8 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R R++ S ++ + TE + E +C+A
Sbjct: 1456 YGWG-RWRDILSHGRFKRRMTERDVETICRA 1485
Score = 39 (18.8 bits), Expect = 4.2e-58, Sum P(4) = 4.2e-58
Identities = 8/38 (21%), Positives = 22/38 (57%)
Query: 1714 GDKKADCKMEPDCLVASDSVNMELVPRDFGVGRRDGDI 1751
G++K ++E +C+ + ++++L R + + DG +
Sbjct: 2288 GNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTL 2325
Score = 38 (18.4 bits), Expect = 5.1e-58, Sum P(5) = 5.1e-58
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 2398 ENTSEGMGGPSPPLVIAEDKTENEIEEDPV 2427
E T+ G+ GP L+ + T E + PV
Sbjct: 2184 EMTTGGILGPGNHLLDSPSLTPGEYGDSPV 2213
Score = 37 (18.1 bits), Expect = 1.4e-56, Sum P(5) = 1.4e-56
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 1818 SSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPV 1877
SS + SS +D+ E DR D S S++ D +E G+ M + +
Sbjct: 2086 SSSSSSSSSDESEDEKEEKLTADRSRPKLYDEESLLSLTMSQDGFPNEDGEQM--TPELL 2143
Query: 1878 HVVEREKSEE 1887
+ ER+++ E
Sbjct: 2144 LLQERQRASE 2153
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 624 (224.7 bits), Expect = 1.6e-58, Sum P(3) = 1.6e-58
Identities = 177/555 (31%), Positives = 274/555 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +I+DE HR+KN K L Y H+LLLT
Sbjct: 837 KFHVLLTSYELITI--DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT 894
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ E F + F D + + I
Sbjct: 895 GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----------IK 937
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 938 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGN 997
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL + A E + Y ++R GKL +L ++L LK
Sbjct: 998 QVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKE 1057
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1118 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI 1177
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXR 436
A+ K+ + + + G + T + ++E L+ +L+ EE
Sbjct: 1178 TQVAKKKMMLTHLVVRPGL-GSKTGSMSKQE-LDDILK-FGTEELFKDEATDGGGDNKEG 1234
Query: 437 SESEIDVFE--SVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMK 494
+S + ++ ++++ + T ++G+ + +V ++++ E +
Sbjct: 1235 EDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFK-VAQYVVREEEMGEEEEVER 1293
Query: 495 IYDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSYEEQWTEEEFEKMCQA 551
+ V P+ K H ++ G+GKR R+ +Y + E+ + Q+
Sbjct: 1294 EIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQS 1353
Query: 552 ES-SDSPKLKEEGLE 565
++ SD EEG E
Sbjct: 1354 DNQSDYSVASEEGDE 1368
Score = 88 (36.0 bits), Expect = 1.6e-58, Sum P(3) = 1.6e-58
Identities = 28/86 (32%), Positives = 41/86 (47%)
Query: 2341 PVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVD-GAVALEN 2399
P P A GPA A E++K + P G ++E E + +A EPM+ G +E
Sbjct: 1593 PAPAPAPGPAP--APEDDKAPA--EPPEGEE--KVEKAEVKERAEEPMETESKGTTEVEK 1646
Query: 2400 TSEGMGGPSPPLVIAEDKTENEIEED 2425
E P+V+ EDK E + EE+
Sbjct: 1647 AEEKSAVDLTPIVV-EDKEEKKEEEE 1671
Score = 64 (27.6 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 41/161 (25%), Positives = 58/161 (36%)
Query: 1186 EVAKKQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASK 1245
E KK S TPT TP G PN P + ++ + +
Sbjct: 1518 EENKKMSQPGSPSPKTPTPSTP--GDTQPN-TPAPVPPAEDGIKIEENSLKEE-----ES 1569
Query: 1246 TEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEV 1305
TE K E K A + P P P AP P E + + + EV
Sbjct: 1570 TEGEK-EVKPTAPEVTVECAQPPAPAPAP-APGPAPAPEDDKAPAEPPEGEEKVEK-AEV 1626
Query: 1306 KGE-ETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDK 1345
K E P+ +E+ +TE EK S+ V+L + +DK
Sbjct: 1627 KERAEEPMETESKGTTEV---EKAEEKSA-VDLTPIVVEDK 1663
Score = 53 (23.7 bits), Expect = 7.3e-55, Sum P(3) = 7.3e-55
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEE 1887
++K +AE+ +R +EP G + V++A + V +P+ V ++E+ +E
Sbjct: 1618 EEKVEKAEVKERAEEPM-----ETESKGTTE--VEKAEEKSAVDLTPIVVEDKEEKKE 1668
Score = 50 (22.7 bits), Expect = 1.6e-58, Sum P(3) = 1.6e-58
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSS 977
P+ E++ ++ Q P T + +TPA VP + G + L E S
Sbjct: 1512 PELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPVPPAEDGIKIEENS--LKEEES 1569
Query: 978 SKG 980
++G
Sbjct: 1570 TEG 1572
Score = 50 (22.7 bits), Expect = 4.0e-55, Sum P(2) = 4.0e-55
Identities = 31/125 (24%), Positives = 50/125 (40%)
Query: 1946 QPSSSLAPWEAKIDGSS-EKDPVSSQSVLEGSKETVAEAGD-QMDISIMPEKLPEHLDIP 2003
QP++ AP DG E++ + + EG KE A + ++ + P P P
Sbjct: 1543 QPNTP-APVPPAEDGIKIEENSLKEEESTEGEKEVKPTAPEVTVECAQPPAPAPAPAPGP 1601
Query: 2004 ASLA----TPEEKTEGSEKDPDSSFAAQ-EDPKES-------VVEAGDQMGVSLGGATVM 2051
A P E EG EK + + E+P E+ V +A ++ V L V
Sbjct: 1602 APAPEDDKAPAEPPEGEEKVEKAEVKERAEEPMETESKGTTEVEKAEEKSAVDLTPIVVE 1661
Query: 2052 EKSSE 2056
+K +
Sbjct: 1662 DKEEK 1666
Score = 48 (22.0 bits), Expect = 2.1e-53, Sum P(3) = 2.1e-53
Identities = 25/110 (22%), Positives = 37/110 (33%)
Query: 678 SSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSG---EQVPRRRGKKIGLVLP--- 731
S P T P PG + P+ P+ P G +I+ E+ K++ P
Sbjct: 1528 SPSPKTP-TPSTPGDTQPNT-PA-PVPPAEDGIKIEENSLKEEESTEGEKEVKPTAPEVT 1584
Query: 732 --AASDDIPSPGPDPKTNEQPQSESL--NPSGGESTATDGNVSSIPTAPV 777
A P+P P P P+ + P GE V P+
Sbjct: 1585 VECAQPPAPAPAPAPGPAPAPEDDKAPAEPPEGEEKVEKAEVKERAEEPM 1634
Score = 47 (21.6 bits), Expect = 8.3e-55, Sum P(2) = 8.3e-55
Identities = 26/139 (18%), Positives = 46/139 (33%)
Query: 843 TPRRRGKRQALGSPPISDVSAGPESKSN-LQSENNSGGLRLSKSVSMGKQDALSQELSNK 901
TP G Q P+ G + + N L+ E ++ G + K + +Q +
Sbjct: 1535 TPSTPGDTQPNTPAPVPPAEDGIKIEENSLKEEESTEGEKEVKPTAPEVTVECAQPPAPA 1594
Query: 902 IQVQPCGVATSADVAGPDQKP-AEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMD 960
P D P + P E+ V + + P +S + ++D
Sbjct: 1595 PAPAPGPAPAPEDDKAPAEPPEGEEKVEKAEVKERAEEPMETESKGTTEVEKAEEKSAVD 1654
Query: 961 LGNVASDTKEVLSENSSSK 979
L + + KE E K
Sbjct: 1655 LTPIVVEDKEEKKEEEEKK 1673
Score = 46 (21.3 bits), Expect = 3.9e-54, Sum P(3) = 3.9e-54
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 2170 AETVQEEEKTELSCEKQPIGSSVDDESKGP-EVE 2202
AE + EEK E + K+ ++ ESKG EVE
Sbjct: 1612 AEPPEGEEKVEKAEVKERAEEPMETESKGTTEVE 1645
Score = 42 (19.8 bits), Expect = 9.0e-53, Sum P(3) = 9.0e-53
Identities = 17/64 (26%), Positives = 25/64 (39%)
Query: 921 KPA--EQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSE--NS 976
KP E +V Q P PA + + PA+ P + ++ KE E +
Sbjct: 1577 KPTAPEVTVECAQPPAPAPAPAPGPAPAPEDDKAPAEPPEGEEKVEKAEVKERAEEPMET 1636
Query: 977 SSKG 980
SKG
Sbjct: 1637 ESKG 1640
Score = 41 (19.5 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 2172 TVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVPETVPEELGLPSSP 2229
+++EEE TE E +P V E +P G P PE+ P+ P
Sbjct: 1563 SLKEEESTEGEKEVKPTAPEVTVEC----AQPPAPAPAPAPG--PAPAPEDDKAPAEP 1614
Score = 41 (19.5 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 11/60 (18%), Positives = 29/60 (48%)
Query: 1953 PWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEK 2012
P E + G++E + +S ++ + V + ++ + E L ++ + P L+ ++K
Sbjct: 1633 PMETESKGTTEVEKAEEKSAVDLTPIVVEDKEEKKEEEEKKEVLLQNGETPKDLSDEKQK 1692
Score = 40 (19.1 bits), Expect = 1.7e-53, Sum P(3) = 1.7e-53
Identities = 27/137 (19%), Positives = 49/137 (35%)
Query: 1203 TVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIEN 1262
TVE P +P PG ++D + P G K E + +A+ +E
Sbjct: 1584 TVECAQPPAPAPAPAPGPAPAPEDD---KAPAEPPEGEEKVEKAEV---KERAEEP-MET 1636
Query: 1263 IANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEA 1322
+ + + + ++ P I +E E+ + EV + + E P
Sbjct: 1637 ESKGTTEVEKAEEKSAVDLTP----IVVEDKEEKKEEEEKKEVLLQ----NGETPKDLSD 1688
Query: 1323 FEQEKVTNTSSFVNLAD 1339
+Q+K N+AD
Sbjct: 1689 EKQKKNLKQRFMFNIAD 1705
Score = 38 (18.4 bits), Expect = 2.7e-53, Sum P(3) = 2.7e-53
Identities = 17/72 (23%), Positives = 28/72 (38%)
Query: 2142 SSVTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEV 2201
S T E K E A D ++ E +EEEK E+ + + DE + +
Sbjct: 1638 SKGTTEVEKAEEKSAVDLTPIVVEDK--EEKKEEEEKKEVLLQNGETPKDLSDEKQKKNL 1695
Query: 2202 EPCVQMDVRGDG 2213
+ ++ DG
Sbjct: 1696 KQRFMFNI-ADG 1706
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 624 (224.7 bits), Expect = 2.2e-58, Sum P(3) = 2.2e-58
Identities = 177/555 (31%), Positives = 274/555 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +I+DE HR+KN K L Y H+LLLT
Sbjct: 865 KFHVLLTSYELITI--DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT 922
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ E F + F D + + I
Sbjct: 923 GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----------IK 965
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 966 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGN 1025
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL + A E + Y ++R GKL +L ++L LK
Sbjct: 1026 QVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKE 1085
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1086 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1145
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1146 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI 1205
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXR 436
A+ K+ + + + G + T + ++E L+ +L+ EE
Sbjct: 1206 TQVAKKKMMLTHLVVRPGL-GSKTGSMSKQE-LDDILK-FGTEELFKDEATDGGGDNKEG 1262
Query: 437 SESEIDVFE--SVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMK 494
+S + ++ ++++ + T ++G+ + +V ++++ E +
Sbjct: 1263 EDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFK-VAQYVVREEEMGEEEEVER 1321
Query: 495 IYDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSYEEQWTEEEFEKMCQA 551
+ V P+ K H ++ G+GKR R+ +Y + E+ + Q+
Sbjct: 1322 EIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQS 1381
Query: 552 ES-SDSPKLKEEGLE 565
++ SD EEG E
Sbjct: 1382 DNQSDYSVASEEGDE 1396
Score = 87 (35.7 bits), Expect = 2.2e-58, Sum P(3) = 2.2e-58
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 2341 PVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVD-GAVALEN 2399
P P GP A E ++ + P G ++E E + +A EPM+ G +E
Sbjct: 1623 PAPASGPGPTPGPAPAPEDDKAPAEPPEGEE--KVEKAEVKERAEEPMETESKGTTEVEK 1680
Query: 2400 TSEGMGGPSPPLVIAEDKTENEIEED 2425
E P+V+ EDK E + EE+
Sbjct: 1681 AEEKSAVDLTPIVV-EDKEEKKEEEE 1705
Score = 65 (27.9 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 40/162 (24%), Positives = 58/162 (35%)
Query: 1186 EVAKKQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASK 1245
E KK S TPT TP G PN P + ++ + + T K
Sbjct: 1546 EENKKMSQPGSPSPKTPTPSTP--GDTQPN-TPAPVPPAEDGIKIEENSLKEEESTEGEK 1602
Query: 1246 TEALKPENKAQAGRIENIANSSPDDKSLP-MVPNLETAPPGFDIPIEKHNEQSRNQNNPE 1304
+KP +P S P P AP P E + + + E
Sbjct: 1603 E--VKPTAPEVTVECAQPPAPAPAPASGPGPTPGPAPAPEDDKAPAEPPEGEEKVEK-AE 1659
Query: 1305 VKGE-ETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDK 1345
VK E P+ +E+ +TE EK S+ V+L + +DK
Sbjct: 1660 VKERAEEPMETESKGTTEV---EKAEEKSA-VDLTPIVVEDK 1697
Score = 53 (23.7 bits), Expect = 7.9e-55, Sum P(3) = 7.9e-55
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEE 1887
++K +AE+ +R +EP G + V++A + V +P+ V ++E+ +E
Sbjct: 1652 EEKVEKAEVKERAEEPM-----ETESKGTTE--VEKAEEKSAVDLTPIVVEDKEEKKE 1702
Score = 50 (22.7 bits), Expect = 2.2e-58, Sum P(3) = 2.2e-58
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSS 977
P+ E++ ++ Q P T + +TPA VP + G + L E S
Sbjct: 1540 PELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPVPPAEDGIKIEENS--LKEEES 1597
Query: 978 SKG 980
++G
Sbjct: 1598 TEG 1600
Score = 49 (22.3 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 16/58 (27%), Positives = 22/58 (37%)
Query: 2172 TVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVPETVPEELGLPSSP 2229
+++EEE TE E +P V E P G P PE+ P+ P
Sbjct: 1591 SLKEEESTEGEKEVKPTAPEVTVECAQPPAPAPAPASGPGPTPGPAPAPEDDKAPAEP 1648
Score = 46 (21.3 bits), Expect = 4.3e-54, Sum P(3) = 4.3e-54
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 2170 AETVQEEEKTELSCEKQPIGSSVDDESKGP-EVE 2202
AE + EEK E + K+ ++ ESKG EVE
Sbjct: 1646 AEPPEGEEKVEKAEVKERAEEPMETESKGTTEVE 1679
Score = 43 (20.2 bits), Expect = 8.8e-54, Sum P(3) = 8.8e-54
Identities = 27/140 (19%), Positives = 48/140 (34%)
Query: 1200 VTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGR 1259
VT PP +P PG G + D P K E + + +A+
Sbjct: 1611 VTVECAQPPAPAPAPASGPGPTPGPA--PAPEDDKAPAEPPEGEEKVEKAEVKERAEEP- 1667
Query: 1260 IENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPAS 1319
+E + + + + ++ P I +E E+ + EV + + E P
Sbjct: 1668 METESKGTTEVEKAEEKSAVDLTP----IVVEDKEEKKEEEEKKEVLLQ----NGETPKD 1719
Query: 1320 TEAFEQEKVTNTSSFVNLAD 1339
+Q+K N+AD
Sbjct: 1720 LSDEKQKKNLKQRFMFNIAD 1739
Score = 42 (19.8 bits), Expect = 1.1e-53, Sum P(3) = 1.1e-53
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 1993 PEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKES--VVEAGDQMGVSLGGATV 2050
P PE PA EEK E +E + + + K + V +A ++ V L V
Sbjct: 1635 PAPAPEDDKAPAEPPEGEEKVEKAEVKERAEEPMETESKGTTEVEKAEEKSAVDLTPIVV 1694
Query: 2051 MEKSSE 2056
+K +
Sbjct: 1695 EDKEEK 1700
Score = 41 (19.5 bits), Expect = 1.4e-53, Sum P(3) = 1.4e-53
Identities = 11/60 (18%), Positives = 29/60 (48%)
Query: 1953 PWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEK 2012
P E + G++E + +S ++ + V + ++ + E L ++ + P L+ ++K
Sbjct: 1667 PMETESKGTTEVEKAEEKSAVDLTPIVVEDKEEKKEEEEKKEVLLQNGETPKDLSDEKQK 1726
Score = 41 (19.5 bits), Expect = 1.2e-52, Sum P(3) = 1.2e-52
Identities = 14/48 (29%), Positives = 17/48 (35%)
Query: 731 PA-ASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPV 777
PA AS P+PGP P + P GE V P+
Sbjct: 1623 PAPASGPGPTPGPAPAPEDD--KAPAEPPEGEEKVEKAEVKERAEEPM 1668
Score = 39 (18.8 bits), Expect = 6.1e-54, Sum P(2) = 6.1e-54
Identities = 27/145 (18%), Positives = 49/145 (33%)
Query: 843 TPRRRGKRQALGSPPISDVSAGPESKSN-LQSENNSGGLRLSK------SVSMGKQDALS 895
TP G Q P+ G + + N L+ E ++ G + K +V + A +
Sbjct: 1563 TPSTPGDTQPNTPAPVPPAEDGIKIEENSLKEEESTEGEKEVKPTAPEVTVECAQPPAPA 1622
Query: 896 QELSNKIQVQPCGVATSADVAGPDQKP-AEQSVRVVQSNQPINLPATHDSSSQPSGSTPA 954
++ P D P + P E+ V + + P +S
Sbjct: 1623 PAPASGPGPTPGPAPAPEDDKAPAEPPEGEEKVEKAEVKERAEEPMETESKGTTEVEKAE 1682
Query: 955 QVPSMDLGNVASDTKEVLSENSSSK 979
+ ++DL + + KE E K
Sbjct: 1683 EKSAVDLTPIVVEDKEEKKEEEEKK 1707
Score = 38 (18.4 bits), Expect = 2.9e-53, Sum P(3) = 2.9e-53
Identities = 17/72 (23%), Positives = 28/72 (38%)
Query: 2142 SSVTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEV 2201
S T E K E A D ++ E +EEEK E+ + + DE + +
Sbjct: 1672 SKGTTEVEKAEEKSAVDLTPIVVEDK--EEKKEEEEKKEVLLQNGETPKDLSDEKQKKNL 1729
Query: 2202 EPCVQMDVRGDG 2213
+ ++ DG
Sbjct: 1730 KQRFMFNI-ADG 1740
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 641 (230.7 bits), Expect = 3.0e-58, Sum P(2) = 3.0e-58
Identities = 179/571 (31%), Positives = 286/571 (50%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ L I+W +++DE HR+KN K L Y+ H+LLLT
Sbjct: 854 KFHVLLTSYELITI--DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 911
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP FN+ E F + F D S + I
Sbjct: 912 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ----------IK 954
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L S G
Sbjct: 955 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGN 1014
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLCGKLEMLDRLLPKLKA 256
S+ N +M+L+ CNHPYL + A E L Y +++ GKL +L ++L KLK
Sbjct: 1015 QVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKE 1074
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L ++ Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1075 QGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLL 1134
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHRIGQ V++ RF T +VEE++
Sbjct: 1135 STRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERI 1194
Query: 377 RASAEHKLGVANQSITAGFFDN--NTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXX 434
A+ K+ + + + G + S ++ + L+ E K+E
Sbjct: 1195 TQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIH 1254
Query: 435 XRSES-------EIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT-DDDL 486
+E+ D E D Q E ++++ K+ + + + + + + ++ ++++
Sbjct: 1255 YDNEAIARLLDRNQDATEDTDVQNMNEYLSSF-KVAQYVVREEDKIEEIEREIIKQEENV 1313
Query: 487 KALYEAMKI---YDAPKTGVSPNVGV-KRKGEHLGALDTQHYGRGKRAREVRSYEEQWTE 542
Y + Y+ + ++ N+G KR + + D + ++ EE+ +
Sbjct: 1314 DPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEE--D 1371
Query: 543 EEFEKMCQAESSDSPKLKEEGLEKSLPTVVS 573
E+F++ + +L+ E +K LP +++
Sbjct: 1372 EDFDERPEGRRQSKRQLRNEK-DKPLPPLLA 1401
Score = 68 (29.0 bits), Expect = 2.0e-57, Sum P(3) = 2.0e-57
Identities = 28/94 (29%), Positives = 39/94 (41%)
Query: 678 SSQPTTAFVPVAPGSQSA-SACPSTPMQP----KGRGRRI-------QSGEQVPRRRGKK 725
+S PT P P + +A S C S P P KG G R ++ E+ P + K
Sbjct: 1531 ASSPTKTS-PTTPEASAANSPCTSKPATPAPSEKGEGMRTPLEKDEAENQEEKPEKNSKT 1589
Query: 726 IGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSG 759
G + A +D PSP P +P+ L G
Sbjct: 1590 -GEKMEAEADT-PSPAPSLGERLEPRKVPLEDEG 1621
Score = 63 (27.2 bits), Expect = 3.0e-58, Sum P(2) = 3.0e-58
Identities = 33/138 (23%), Positives = 49/138 (35%)
Query: 1188 AKKQSSDDKTCSVTPTVE------TPPPGFNSPNEN-PGELTGTKNDASVRGDHTPVSGH 1240
+ + SS KT TP T P +P+E G T + D + + P
Sbjct: 1528 SSRASSPTKTSPTTPEASAANSPCTSKPATPAPSEKGEGMRTPLEKDEAENQEEKPEKNS 1587
Query: 1241 TLASKTEALK--PENKAQAG-RIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQS 1297
K EA P G R+E P + P P PG+ E+S
Sbjct: 1588 KTGEKMEAEADTPSPAPSLGERLE--PRKVPLEDEGPGGPGEMEPEPGY----RGDREKS 1641
Query: 1298 RNQNNPEVKGEETPVSSE 1315
++ P +GEE P+ +
Sbjct: 1642 ATESTPGERGEEKPLDGQ 1659
Score = 62 (26.9 bits), Expect = 8.5e-57, Sum P(3) = 8.5e-57
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPS 796
+P PDP + + S + +P+ T + + ++ P P + +PS KG+ G P
Sbjct: 1514 MPELMPDPSADSKRSSRASSPTKTSPTTPEASAANSPCTSKPATPAPSE-KGE-GMRTPL 1571
Query: 797 SAVAALNSE 805
A N E
Sbjct: 1572 EKDEAENQE 1580
Score = 55 (24.4 bits), Expect = 2.1e-57, Sum P(2) = 2.1e-57
Identities = 22/88 (25%), Positives = 33/88 (37%)
Query: 638 KVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHV-MVGIAPSSQPTTAFVPVAPGSQSAS 696
K EK++ TG+ A A P + V + P P G + S
Sbjct: 1582 KPEKNSKTGEKMEAEADTPSPAPSLGERLEPRKVPLEDEGPGGPGEMEPEPGYRGDREKS 1641
Query: 697 ACPSTPMQPKGRGRRIQSGEQVPRRRGK 724
A STP + +G + + EQ R G+
Sbjct: 1642 ATESTPGE-RGEEKPLDGQEQRERPEGE 1668
Score = 53 (23.7 bits), Expect = 3.4e-57, Sum P(2) = 3.4e-57
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E+ D + + EE++E D+ P G S+ + + + K P+
Sbjct: 1355 EDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPL 1399
Score = 52 (23.4 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 23/75 (30%), Positives = 31/75 (41%)
Query: 1261 ENIANSSPDDKSLPMVPNLETAPPGFDIPIEK---HNEQSRNQNNPEVKGE----ETPVS 1313
E A +SP S P P G P+EK N++ + + N + GE E
Sbjct: 1543 EASAANSPCT-SKPATPAPSEKGEGMRTPLEKDEAENQEEKPEKNSKT-GEKMEAEADTP 1600
Query: 1314 SEAPASTEAFEQEKV 1328
S AP+ E E KV
Sbjct: 1601 SPAPSLGERLEPRKV 1615
Score = 47 (21.6 bits), Expect = 5.1e-55, Sum P(3) = 5.1e-55
Identities = 29/98 (29%), Positives = 42/98 (42%)
Query: 1486 SPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSG-----P--QNSAVGFCDKSEIPS- 1537
S +S T+ S + + N P +P + +P G P ++ A +K E S
Sbjct: 1529 SRASSPTKTSPTTPEASAANSPCTSKPATPAPSEKGEGMRTPLEKDEAENQEEKPEKNSK 1588
Query: 1538 ----MEAEVAKCPSDA-IVNNLLE---TPLDIKSIGGP 1567
MEAE A PS A + LE PL+ + GGP
Sbjct: 1589 TGEKMEAE-ADTPSPAPSLGERLEPRKVPLEDEGPGGP 1625
Score = 43 (20.2 bits), Expect = 2.0e-57, Sum P(3) = 2.0e-57
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 1207 PPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTE 1247
P PG+ E + T++ RG+ P+ G + E
Sbjct: 1630 PEPGYRGDREK----SATESTPGERGEEKPLDGQEQRERPE 1666
Score = 41 (19.5 bits), Expect = 3.3e-57, Sum P(3) = 3.3e-57
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSM-SGVVDELVDEAGDHMG 1871
+ A+E+ G+R +E +DG R G +L A D G
Sbjct: 1639 EKSATESTPGERGEEKPLDGQEQRERPEGETGDLGKRAEDVKG 1681
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 684 (245.8 bits), Expect = 3.2e-58, Sum P(6) = 3.2e-58
Identities = 166/411 (40%), Positives = 232/411 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 919 KFDALITTFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 976
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S +F + F GD + +
Sbjct: 977 GTPLQNTVEELFSLLHFLEPSQFPSESEFLKDF-------GDLKTEEQ----------VQ 1019
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 1020 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHT 1079
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEVDT-------LIPKHY-LPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ T +IP + L +VR GKL ++D
Sbjct: 1080 NMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLID 1139
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1140 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1199
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1200 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1259
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAED-RREYLESLLRE 415
+ E ++ A KLG+ QS++ G N T + ++ +E LLR+
Sbjct: 1260 RNSYEREMFDKASLKLGLDKAVLQSMS-GRDGNITGIQQFSKKEIEDLLRK 1309
Score = 59 (25.8 bits), Expect = 3.2e-58, Sum P(6) = 3.2e-58
Identities = 30/126 (23%), Positives = 55/126 (43%)
Query: 1954 WEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDIS-IMPEKLPEHLDIPASLATPEEK 2012
+E ++ S+ P+ S+SV E ++ ++D+S + P +S +T E +
Sbjct: 2041 YEMRVS-PSDTTPLVSRSVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESE 2099
Query: 2013 TEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANEEEMI 2072
E EK D S + D +ES++ + +S G + E + TP L L E +
Sbjct: 2100 DEKEEKLTDQSRSKLYD-EESLLS----LTMSQDGFP--NEDGEQM-TPELLLLQERQRA 2151
Query: 2073 EGFDND 2078
+ D
Sbjct: 2152 SEWPKD 2157
Score = 53 (23.7 bits), Expect = 3.2e-58, Sum P(6) = 3.2e-58
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 1416 DDHSLVKELIHRSPDH-SDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVA 1474
DD ++ E HR D+ SD+V G ED PL+ P + EG + M ++++
Sbjct: 1664 DDKAIAAE--HRVLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEIS 1721
Score = 42 (19.8 bits), Expect = 3.2e-58, Sum P(6) = 3.2e-58
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R R++ S ++ + TE + E +C+A
Sbjct: 1456 YGWG-RWRDILSHGRFKRRMTERDVETICRA 1485
Score = 41 (19.5 bits), Expect = 5.4e-57, Sum P(6) = 5.4e-57
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 1360 DIPIEKGVEQSGTEI 1374
D P+EK E++ T++
Sbjct: 2002 DAPVEKSPEETATQV 2016
Score = 40 (19.1 bits), Expect = 3.2e-58, Sum P(6) = 3.2e-58
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 2400 TSEGMGGPSPPLVIAEDKTENEIEED 2425
T+ G PPL ED E+E ++D
Sbjct: 2523 TASGTTLRLPPLQPEEDDDEDEEDDD 2548
Score = 40 (19.1 bits), Expect = 2.6e-57, Sum P(5) = 2.6e-57
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 1714 GDKKADCKMEPDCLVASDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALL 1765
G++K ++E +C+ + ++++L R + + DG + + E P A L
Sbjct: 2288 GNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVG--EDAPRRAEL 2337
Score = 38 (18.4 bits), Expect = 3.2e-58, Sum P(6) = 3.2e-58
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEE 2357
GP + ++ G PVP A+ +A EE
Sbjct: 2192 GPGNHLLDSPSLTPGEYGDSPVPTPRSSSAASMAEEE 2228
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 638 (229.6 bits), Expect = 5.4e-58, Sum P(3) = 5.4e-58
Identities = 181/559 (32%), Positives = 273/559 (48%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ L I W +++DE HR+KN K L +Y H+LLLT
Sbjct: 854 KFHVLLTSYELITI--DQAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQHKLLLT 911
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP FN+ E F + F D + + I
Sbjct: 912 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADIAKEDQ----------IK 954
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 955 KLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKYILTRNFEALNTRGGGN 1014
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL A E + Y + + GKL +L ++L KLK
Sbjct: 1015 QVSLLNVVMDLKKCCNHPYLFPTAATEAPKMPNGMYDGSALTKASGKLMLLFKMLKKLKE 1074
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +GG R ID+FN +P F+FLL
Sbjct: 1075 GGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLL 1134
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1135 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERI 1194
Query: 377 RASAEHKLGVANQSITAGFFDN--NTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXX 434
A+ K+ + + + G + S ++ + L+ + K+E
Sbjct: 1195 TQVAKKKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEQLFKDELGEGDNKEEDSSVI 1254
Query: 435 XRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMK 494
+ ID +D+ + E + + L + + +V D+D + +
Sbjct: 1255 HYDDKAID--RLLDRNQDATEDTELQSMNEYLSSF-----KVAQYVVKDEDEEEEDVDRE 1307
Query: 495 IYDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSY-----EEQWTEEEFE 546
I ++ V P+ K H +H G+GKR R+ +Y E++ + +++
Sbjct: 1308 IIKQEES-VDPDYWEKLLRHHYEQQQEDLARHLGKGKRPRKPVNYNDCSQEDRGSRRDWQ 1366
Query: 547 KMCQAESSDSPKLKEEGLE 565
SD EEG E
Sbjct: 1367 DDQSDNQSDYSVASEEGDE 1385
Score = 81 (33.6 bits), Expect = 5.4e-58, Sum P(3) = 5.4e-58
Identities = 38/164 (23%), Positives = 66/164 (40%)
Query: 1222 TGTKNDASVRGDHTPVSGHTLASKTEALKP-ENKAQAGRIENIANSSPDDKSLPMVPNLE 1280
TGT D +TP SKTE +K E K + + + S +D+ + + E
Sbjct: 1556 TGTPADTQ---PNTPAPEDL--SKTEDIKELEEKTEGDGEKEVKGSRQEDEIIEIPDEGE 1610
Query: 1281 TAPPGF--DIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLA 1338
+P + +K +E S ++ + E+ ++ S E + + S N
Sbjct: 1611 KSPSSAKKEEKTDKESEASSEKDGGSRENEKDGEKEKSAESKENMSSDVKADGSDATNSG 1670
Query: 1339 DLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVKWKN 1382
D S+ K S M+T+P D E E+ G + + K +N
Sbjct: 1671 D-STKTKEESSEEKMDTSPASDEKKELKDEKDGVKPEDSAKLQN 1713
Score = 73 (30.8 bits), Expect = 3.7e-57, Sum P(3) = 3.7e-57
Identities = 30/96 (31%), Positives = 45/96 (46%)
Query: 1941 LSDFCQPSSSLAPWEAKID----GSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKL 1996
+ D + S S A E K D SSEKD S ++ +G KE AE+ + M + +
Sbjct: 1605 IPDEGEKSPSSAKKEEKTDKESEASSEKDGGSRENEKDGEKEKSAESKENMSSDVKADGS 1664
Query: 1997 PEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKE 2032
D S + + K E SE+ D+S A ++ KE
Sbjct: 1665 ----DATNSGDSTKTKEESSEEKMDTS-PASDEKKE 1695
Score = 68 (29.0 bits), Expect = 1.2e-56, Sum P(3) = 1.2e-56
Identities = 41/187 (21%), Positives = 65/187 (34%)
Query: 1087 EAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADVNDV-- 1144
E+ R G P P D + N + + K L K E +V
Sbjct: 1538 ESKRAAAIAAGEDPKTPSTGTPADTQPNTPAPEDLSKTEDIK--ELEEKTEGDGEKEVKG 1595
Query: 1145 ARVMKEIFSETCSSKAKTGDSSLNEGK-DXXXXXXXXXXXXXEVAKKQSSDDKTCSVTPT 1203
+R EI E K+ S+ E K D +K +K+
Sbjct: 1596 SRQEDEII-EIPDEGEKSPSSAKKEEKTDKESEASSEKDGGSRENEKDGEKEKSAESKEN 1654
Query: 1204 VETPPPGFNSPNENPGELTGTKNDASV-RGDHTPVSGHT--LASKTEALKPENKAQAGRI 1260
+ + S N G+ T TK ++S + D +P S L + + +KPE+ A+
Sbjct: 1655 MSSDVKADGSDATNSGDSTKTKEESSEEKMDTSPASDEKKELKDEKDGVKPEDSAKLQNG 1714
Query: 1261 ENIANSS 1267
EN +S
Sbjct: 1715 ENAKETS 1721
Score = 61 (26.5 bits), Expect = 6.7e-56, Sum P(3) = 6.7e-56
Identities = 33/130 (25%), Positives = 53/130 (40%)
Query: 1947 PSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASL 2006
P+ + A D S +D + EG E + Q D I ++P+ + S
Sbjct: 1559 PADTQPNTPAPEDLSKTEDIKELEEKTEGDGEKEVKGSRQEDEII---EIPDEGEKSPSS 1615
Query: 2007 ATPEEKTE-----GSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATP 2061
A EEKT+ SEKD S ++ KE E+ + M + +S D +T
Sbjct: 1616 AKKEEKTDKESEASSEKDGGSRENEKDGEKEKSAESKENMSSDVKADGSDATNSGD-STK 1674
Query: 2062 PLSLANEEEM 2071
++EE+M
Sbjct: 1675 TKEESSEEKM 1684
Score = 58 (25.5 bits), Expect = 1.4e-55, Sum P(3) = 1.4e-55
Identities = 36/178 (20%), Positives = 76/178 (42%)
Query: 1370 SGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSLVKELIHRSP 1429
+GT D + NTP P E + ++ + E KT+GD ++++ + + ++ E+ P
Sbjct: 1556 TGTPADTQ---PNTPAP-EDLSKTEDIKELEEKTEGDGEKEVKGSRQEDEII-EI----P 1606
Query: 1430 DHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPIN 1489
D + P + ++ K E+ + +G S + D + S E+ S +
Sbjct: 1607 DEGE----KSPSSAKKEE-KTDKESEASSEK-DGGSRENEKDGEKEKSAESKENMSSDVK 1660
Query: 1490 S-GTECSTV--SVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAK 1544
+ G++ + S KT + + ++ + AS E+ ++ G + E AK
Sbjct: 1661 ADGSDATNSGDSTKTKEESSEEKMDTSPASDEKKELKDEKDGVKPEDSAKLQNGENAK 1718
Score = 54 (24.1 bits), Expect = 3.6e-55, Sum P(3) = 3.6e-55
Identities = 41/188 (21%), Positives = 68/188 (36%)
Query: 2164 RGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGI--VPETVPE 2221
R + A + T + QP + +D SK +++ ++ GDG V + E
Sbjct: 1541 RAAAIAAGEDPKTPSTGTPADTQPNTPAPEDLSKTEDIKE-LEEKTEGDGEKEVKGSRQE 1599
Query: 2222 E--LGLPSSPMVVXXXXXXXXXXXXPS-ASSIPRGESKGPDAEANNIIDAEGGGNMRQTV 2278
+ + +P S ASS G S+ + + AE NM V
Sbjct: 1600 DEIIEIPDEGEKSPSSAKKEEKTDKESEASSEKDGGSRENEKDGEKEKSAESKENMSSDV 1659
Query: 2279 PQDLGLPLSSSDVEEEKIEGFSK-----PVGSEKESIAS----AVPLDESKGPDAEVSSQ 2329
D +S D + K E + P EK+ + P D +K + E + +
Sbjct: 1660 KADGSDATNSGDSTKTKEESSEEKMDTSPASDEKKELKDEKDGVKPEDSAKLQNGENAKE 1719
Query: 2330 TAIEGGGV 2337
T+ G GV
Sbjct: 1720 TSGGGDGV 1727
Score = 53 (23.7 bits), Expect = 4.6e-55, Sum P(3) = 4.6e-55
Identities = 28/102 (27%), Positives = 40/102 (39%)
Query: 2272 GNMRQTVPQDLG-LPLSSSDVEE-EKIEG-FSKPVGSEKESIASAVPLDESKGPDAEVSS 2328
G RQ V +G + L V+E E + G +S P E E A + + G D + S
Sbjct: 1498 GLSRQHVLTRIGVMSLIRKKVQEFEHVNGQWSMPWMKELEESKRAAAI--AAGEDPKTPS 1555
Query: 2329 QTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGS 2370
T + P PE+ EE+ +KE GS
Sbjct: 1556 -TGTPADTQPNTPAPEDLSKTEDIKELEEKTEGDGEKEVKGS 1596
Score = 52 (23.4 bits), Expect = 8.4e-57, Sum P(2) = 8.4e-57
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 527 GKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSS 574
G++ + S E ++ + + S DS K KEE E+ + T +S
Sbjct: 1643 GEKEKSAESKENMSSDVKADGSDATNSGDSTKTKEESSEEKMDTSPAS 1690
Score = 47 (21.6 bits), Expect = 1.9e-54, Sum P(3) = 1.9e-54
Identities = 30/109 (27%), Positives = 46/109 (42%)
Query: 1889 GLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSDFCQPS 1948
G S SSA KEEK D + + + E+ K G++ +S EN+S +
Sbjct: 1609 GEKSPSSAKKEEKTDKESEASSEKDGGSRENEKD--GEKEKSAES----KENMSSDVKAD 1662
Query: 1949 SSLAPWEAKIDGSSEKDPV-SSQSVLEGS--KETVAEAGDQMDISIMPE 1994
S +A G S K SS+ ++ S + E D+ D + PE
Sbjct: 1663 GS----DATNSGDSTKTKEESSEEKMDTSPASDEKKELKDEKD-GVKPE 1706
Score = 45 (20.9 bits), Expect = 3.1e-54, Sum P(3) = 3.1e-54
Identities = 29/128 (22%), Positives = 53/128 (41%)
Query: 1204 VETPPPGFNSPNE-NPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIEN 1262
+E P G SP+ E T +++AS D G + ++ + K E A++ EN
Sbjct: 1603 IEIPDEGEKSPSSAKKEEKTDKESEASSEKD-----GGSRENEKDGEK-EKSAESK--EN 1654
Query: 1263 IANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEA 1322
+++ D S + ++ + EK + + E+K E+ V E A +
Sbjct: 1655 MSSDVKADGS-DATNSGDSTKTKEESSEEKMDTSPASDEKKELKDEKDGVKPEDSAKLQN 1713
Query: 1323 FEQEKVTN 1330
E K T+
Sbjct: 1714 GENAKETS 1721
Score = 44 (20.5 bits), Expect = 4.0e-54, Sum P(3) = 4.0e-54
Identities = 25/111 (22%), Positives = 42/111 (37%)
Query: 2344 EEADGPASFLAAEEEKNECS----DKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALEN 2399
EE+ A+ A E+ K + D +P + + SK + K E DG ++
Sbjct: 1537 EESKRAAAIAAGEDPKTPSTGTPADTQPNTPAPEDL-SKTEDIKELEEKTEGDGEKEVKG 1595
Query: 2400 TSE--------GMGGPSPPLVIAEDKTENEIEEDPVVNSVAVEESKGSEAD 2442
+ + G SP E+KT+ E E + + E K E +
Sbjct: 1596 SRQEDEIIEIPDEGEKSPSSAKKEEKTDKESEASSEKDGGSRENEKDGEKE 1646
Score = 39 (18.8 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 10/54 (18%), Positives = 20/54 (37%)
Query: 752 SESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSE 805
S++ N T + + + T+P D +K + + P + N E
Sbjct: 1664 SDATNSGDSTKTKEESSEEKMDTSPASDE--KKELKDEKDGVKPEDSAKLQNGE 1715
Score = 38 (18.4 bits), Expect = 5.4e-58, Sum P(3) = 5.4e-58
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 542 EEEFEKMCQAESSDSPKLK--EEGLEKSLPTVVS 573
+E+F++ +A +S P K +K LP +++
Sbjct: 1384 DEDFDERSEAANSRRPSRKGLRNDKDKPLPPLLA 1417
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 645 (232.1 bits), Expect = 6.7e-58, Sum P(4) = 6.7e-58
Identities = 151/378 (39%), Positives = 212/378 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
+F ++TT+E ++ +L+ I+W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 969 RFQAIITTFEMILGGCG--ELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLT 1026
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1027 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF-------GDLKTEEQ----------VQ 1069
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE +L K E ++ E + QK + + E+N + G++
Sbjct: 1070 KLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQT 1129
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTLIPK---HYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL + E++ DT P +L +++ GKL ++D
Sbjct: 1130 NVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLID 1189
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPK+KA H+VL FS M R LD++EDYL K+Y Y R+DG G R A ID+F++ D
Sbjct: 1190 KLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPD 1249
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1250 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVT 1309
Query: 369 VQTVEEQVRASAEHKLGV 386
+ E ++ A KLG+
Sbjct: 1310 RNSYEREMFDRASLKLGL 1327
Score = 69 (29.3 bits), Expect = 6.7e-58, Sum P(4) = 6.7e-58
Identities = 48/206 (23%), Positives = 86/206 (41%)
Query: 1251 PENKAQAGRIENIANSSPDDKS-LPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEE 1309
P + G +N+A P S + +PNL P E E+ + ++ EV+G++
Sbjct: 2698 PAGLSSGGEAKNVAAMFPMLLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSKEVEGKK 2757
Query: 1310 TPVSSEAPAS--TEAFEQEKVTNTSSFVNLA---DLSSDDKTCS--VTPAMETAPGFDIP 1362
S+ P + + ++T++ A L+ + S + P M PG ++
Sbjct: 2758 ERTESQNPENGGENSVSSSPASSTAALSTAAAASPLALNPLLLSNILYPGMLLTPGLNLH 2817
Query: 1363 IEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSLVK 1422
I + QS T D + K KN+ L G + +EV K E+ D +K + L +
Sbjct: 2818 IPT-LSQSNT-FDVQ-KNKNSDL-GSS--KSVEV-KEEDSRVRDQEDK--GGTEPSPLHE 2868
Query: 1423 ELIHRSPDHSDMVIGN-VPGNTSEDS 1447
+ +D G+ ++SEDS
Sbjct: 2869 NSTDEGSEKADASSGSDSTSSSSEDS 2894
Score = 58 (25.5 bits), Expect = 1.3e-57, Sum P(3) = 1.3e-57
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 1795 DNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPR 1853
D +G V PE+K KDDI + + LV+ D + GD++ P + R
Sbjct: 1727 DYMDGDVEDPEYKPAPAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTR 1785
Score = 58 (25.5 bits), Expect = 1.3e-57, Sum P(3) = 1.3e-57
Identities = 30/120 (25%), Positives = 47/120 (39%)
Query: 2329 QTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKA-FEP 2387
Q A+ + S+P D A L + K+E +EP S + S+E EP
Sbjct: 2021 QVALSASPLTSLP--RLLDPKAVILEDVKVKSENLKEEPQSSEEESMSSEETRTLIKSEP 2078
Query: 2388 MDVVDGAVAL---ENTSEGMGGPSPPLVIA--EDKTENEIEEDPVVNSVAVEESKGSEAD 2442
+ +G + + S G G +V A E T N + V+ E S S++D
Sbjct: 2079 VSPKNGVLPQATGDQKSGGKGETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSD 2138
Score = 57 (25.1 bits), Expect = 6.7e-58, Sum P(4) = 6.7e-58
Identities = 26/136 (19%), Positives = 56/136 (41%)
Query: 700 STPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSG 759
S P+ PK +G+Q +G+ ++ A ++ + +P P K + S + S
Sbjct: 2076 SEPVSPKNGVLPQATGDQKSGGKGETDRRMVAARTEPL-TPNPASKKQRVHKRGSESSSD 2134
Query: 760 GESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXX 819
+S + + SS ++ S S S +SG+ SS+ + S +++ +++
Sbjct: 2135 SDSDSERSSCSSRSSSS--SSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSS 2192
Query: 820 XXXXXXXXMQTKGQSR 835
+ + Q R
Sbjct: 2193 SSSEESDSEEEEVQKR 2208
Score = 57 (25.1 bits), Expect = 6.0e-56, Sum P(3) = 6.0e-56
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 728 LVLPAASDDIPSPGPDPKTNE--QPQSESLNP-SGGESTATDGNVSSIPTAPVPDSVSPS 784
L P S G D K E + ++ES NP +GGE++ + SS + SP
Sbjct: 2734 LTKPTESGTEEKKGNDSKEVEGKKERTESQNPENGGENSVSSSPASSTAALSTAAAASPL 2793
Query: 785 AV 786
A+
Sbjct: 2794 AL 2795
Score = 53 (23.7 bits), Expect = 1.6e-55, Sum P(3) = 1.6e-55
Identities = 38/168 (22%), Positives = 69/168 (41%)
Query: 1386 PGEAIVAGIEVFKPEN-KTDGDSVEKLEDTVDDHSLVKELIHRSP-DHSDMVIGNVPGNT 1443
P I+ ++V K EN K + S E E+++ + LI P + V+ G+
Sbjct: 2038 PKAVILEDVKV-KSENLKEEPQSSE--EESMSSEE-TRTLIKSEPVSPKNGVLPQATGD- 2092
Query: 1444 SEDSSKMPLETPLIMKSTEG--PSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKT 1501
+ K + ++ TE P+ + K V H R + S S +S +E S+ S ++
Sbjct: 2093 QKSGGKGETDRRMVAARTEPLTPNPASKKQRV--HKRGSE--SSSDSDSDSERSSCSSRS 2148
Query: 1502 DVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDA 1549
+ + S S RSG +S+ C + S + + S +
Sbjct: 2149 SSSSSSSS----SCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSS 2192
Score = 50 (22.7 bits), Expect = 4.3e-55, Sum P(4) = 4.3e-55
Identities = 31/128 (24%), Positives = 49/128 (38%)
Query: 1896 ATKEEKI-----DGSLDKDPDSNLVVLED-SKGSIGDQMDCCQSGVVVPENLSDFCQPSS 1949
A+K++++ + S D D DS S S C S + S C +S
Sbjct: 2118 ASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSAS 2177
Query: 1950 SLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGD-QMDISIMPEKLPEHLDIPASLAT 2008
S SS SS S S+E+ +E + Q P + ASL+T
Sbjct: 2178 S---------SSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHMKAYDEESVASLST 2228
Query: 2009 PEEKTEGS 2016
+++T+ S
Sbjct: 2229 TQDETQDS 2236
Score = 50 (22.7 bits), Expect = 7.5e-54, Sum P(4) = 7.5e-54
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 1444 SEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDV 1503
SE SS ++ S+ S S + + HSR SGS +S + CS+ S +
Sbjct: 2129 SESSSDSDSDSERSSCSSRSSSSSSSSSSCS-HSR-----SGSSSSSSSSCSSASSSSSS 2182
Query: 1504 GNHPQNVEPTSASPE 1518
+ + +S+S E
Sbjct: 2183 SSSSSSSSSSSSSEE 2197
Score = 49 (22.3 bits), Expect = 2.3e-54, Sum P(4) = 2.3e-54
Identities = 35/186 (18%), Positives = 75/186 (40%)
Query: 833 QSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQD 892
QS+ S TP + + AL + P++ + + K+ + + L + +++
Sbjct: 2004 QSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDPKAVILEDVKVKSENLKEEPQSSEEE 2063
Query: 893 ALS-QELSNKIQVQPCGVATSA-DVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSG 950
++S +E I+ +P A DQK + ++++ + T + P+
Sbjct: 2064 SMSSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKG----ETDRRMVAARTEPLTPNPA- 2118
Query: 951 STPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEEKACTNA 1010
S +V G+ +S + SE SS + S+ + R S +C++A
Sbjct: 2119 SKKQRVHKR--GSESSSDSDSDSERSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSA 2176
Query: 1011 SKSKAT 1016
S S ++
Sbjct: 2177 SSSSSS 2182
Score = 47 (21.6 bits), Expect = 6.7e-58, Sum P(4) = 6.7e-58
Identities = 42/196 (21%), Positives = 78/196 (39%)
Query: 859 SDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSN----KIQVQPCGVATSAD 914
S+ SA P + + ++ E++ ++SK ++ + ++ + K+ Q G+
Sbjct: 2314 SEPSAPPPAGAAVKEEHDQS-TQMSKVKKHVREKEFTVKIKDEGGLKLTFQKQGLTQRRP 2372
Query: 915 VAGPDQKPAEQS----VRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKE 970
+ D P +Q +R +Q +L + S P TP Q ++ V D +
Sbjct: 2373 LDSEDCAPGQQQYLTRLRDLQGASESSLASF--PKSLPLSGTPIQ-STLGANGVLLDNQP 2429
Query: 971 VLSENSSSKGGV--IPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITEPYT 1028
V+ + + V + IL + K V + T + S PAL S T+P
Sbjct: 2430 VVKKRRGRRKNVEGVDILFFNRNKPPNHVTL------GLTTSQISTGINPAL-SYTQP-- 2480
Query: 1029 GSTNTEGISNTIHHVP 1044
+GI +T VP
Sbjct: 2481 -----QGIPDTETPVP 2491
Score = 47 (21.6 bits), Expect = 9.9e-55, Sum P(5) = 9.9e-55
Identities = 20/72 (27%), Positives = 24/72 (33%)
Query: 1485 GSPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEA-EVA 1543
G + TE T K GN + VE E P+N S S A A
Sbjct: 2731 GGLLTKPTESGTEEKK---GNDSKEVEGKKERTESQNPENGGENSVSSSPASSTAALSTA 2787
Query: 1544 KCPSDAIVNNLL 1555
S +N LL
Sbjct: 2788 AAASPLALNPLL 2799
Score = 46 (21.3 bits), Expect = 4.6e-54, Sum P(4) = 4.6e-54
Identities = 31/156 (19%), Positives = 61/156 (39%)
Query: 850 RQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGV 909
R + S P+S + G ++ ++ G + V+ + S K +V G
Sbjct: 2071 RTLIKSEPVSPKN-GVLPQATGDQKSGGKGETDRRMVAARTEPLTPNPASKKQRVHKRGS 2129
Query: 910 ATSADVAGPDQKPA--EQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASD 967
+S+D ++ + +S S+ + + SSS S + A S + +S
Sbjct: 2130 ESSSDSDSDSERSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSS 2189
Query: 968 TKEVLSENSSSKGGVIPILA--LSNMKAVERVNIQS 1001
+ SE S S+ + A +MKA + ++ S
Sbjct: 2190 SSSSSSEESDSEEEEVQKRAEGTPHMKAYDEESVAS 2225
Score = 45 (20.9 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 46/232 (19%), Positives = 80/232 (34%)
Query: 1747 RDGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVP-E 1805
RD ++ + S + ++ S+ + V L + LP +P+ ++ +
Sbjct: 1989 RDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSA-SPLTSLPRLLDPKAVILEDVK 2047
Query: 1806 HKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDE 1865
KSEN+ E+ S E + S SE PQ G G D +
Sbjct: 2048 VKSENLKEEPQSSEEESMSSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKGETDRRMVA 2107
Query: 1866 AGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSK-GSI 1924
A ++ +P +R S S + E S S+ S+ GS
Sbjct: 2108 ARTEP-LTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSHSRSGSS 2166
Query: 1925 GDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGS 1976
C S + S SSS + + + SE++ V ++ EG+
Sbjct: 2167 SSSSSSCSSA----SSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRA--EGT 2212
Score = 45 (20.9 bits), Expect = 5.9e-54, Sum P(4) = 5.9e-54
Identities = 22/91 (24%), Positives = 39/91 (42%)
Query: 1082 TPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADV 1141
TP + ++R K+GS S S D++ + S S S S + S S+ ++
Sbjct: 2114 TPNPA-SKKQRVHKRGSESSSDSDS---DSERSSCSSRSSSSSSSSSSCS-HSRSGSSSS 2168
Query: 1142 NDVARVMKEIFSETCSSKAKTGDSSLNEGKD 1172
+ + S + SS + + SS +E D
Sbjct: 2169 SSSSCSSASSSSSSSSSSSSSSSSSSSEESD 2199
Score = 43 (20.2 bits), Expect = 6.0e-56, Sum P(3) = 6.0e-56
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1960 GSSEKDPVSSQSVLEGSKETVAEAG 1984
G +E P+ S EGS++ A +G
Sbjct: 2859 GGTEPSPLHENSTDEGSEKADASSG 2883
Score = 42 (19.8 bits), Expect = 7.6e-56, Sum P(3) = 7.6e-56
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 867 SKSNL--QSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPA 923
S+SN +N + L SKSV + ++D+ ++ +K +P + ++ G ++ A
Sbjct: 2822 SQSNTFDVQKNKNSDLGSSKSVEVKEEDSRVRDQEDKGGTEPSPLHENSTDEGSEKADA 2880
Score = 42 (19.8 bits), Expect = 3.7e-54, Sum P(4) = 3.7e-54
Identities = 26/112 (23%), Positives = 41/112 (36%)
Query: 2247 ASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSE 2306
AS R +G ++ +++ D+E R + SSS G S S
Sbjct: 2118 ASKKQRVHKRGSESSSDSDSDSE-----RSSCSSRSSSSSSSSSSCSHSRSGSSS---SS 2169
Query: 2307 KESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEE 2358
S +SA S + SS ++ E V + A+G A +EE
Sbjct: 2170 SSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHMKAYDEE 2221
Score = 41 (19.5 bits), Expect = 7.5e-54, Sum P(4) = 7.5e-54
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 1191 QSSDDKTCSVTPT---VETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTE 1247
QSS++++ S T +++ P SP G L D G +A++TE
Sbjct: 2058 QSSEEESMSSEETRTLIKSEPV---SPKN--GVLPQATGDQK-SGGKGETDRRMVAARTE 2111
Query: 1248 ALKPENKAQAGRIENIANSSPDD 1270
L P ++ R+ + S D
Sbjct: 2112 PLTPNPASKKQRVHKRGSESSSD 2134
Score = 39 (18.8 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 12/52 (23%), Positives = 17/52 (32%)
Query: 743 DPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTID 794
D + +Q PS +TD + DS S S+ S D
Sbjct: 2849 DSRVRDQEDKGGTEPSPLHENSTDEGSEKADASSGSDSTSSSSEDSDSSNED 2900
Score = 39 (18.8 bits), Expect = 1.2e-55, Sum P(3) = 1.2e-55
Identities = 14/71 (19%), Positives = 26/71 (36%)
Query: 2355 AEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIA 2414
++ E++ CS + SS S S + A + ++S S
Sbjct: 2137 SDSERSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSE 2196
Query: 2415 E-DKTENEIEE 2424
E D E E+++
Sbjct: 2197 ESDSEEEEVQK 2207
Score = 39 (18.8 bits), Expect = 2.6e-54, Sum P(5) = 2.6e-54
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 1860 DELVDEAGDHMGVSHSPVHVVEREK-SEELGLPSLSSATKEEKIDG-SLDKD 1909
D V + D G SP+H ++ SE+ S S +T D S ++D
Sbjct: 2849 DSRVRDQEDKGGTEPSPLHENSTDEGSEKADASSGSDSTSSSSEDSDSSNED 2900
Score = 38 (18.4 bits), Expect = 4.3e-55, Sum P(4) = 4.3e-55
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 2400 TSEGMGGPSPPLVIAEDKTENEIEEDPVVNSVAVEESKGSEA 2441
T E G S + +++TE++ E+ NSV+ + + A
Sbjct: 2742 TEEKKGNDSKEVEGKKERTESQNPENGGENSVSSSPASSTAA 2783
Score = 38 (18.4 bits), Expect = 3.1e-53, Sum P(4) = 3.1e-53
Identities = 20/118 (16%), Positives = 40/118 (33%)
Query: 1082 TPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADV 1141
+P G P+ G ++ G D V A+ + N + + + R + ++D
Sbjct: 2080 SPKNGVLPQATGDQKSGGKGETDRRMVA-ARTEPLTPNPASKK---QRVHKRGSESSSDS 2135
Query: 1142 NDVARVMKEIFSETCSSKAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCS 1199
+ + +CSS++ + SS + A SS + S
Sbjct: 2136 DSDSE------RSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSS 2187
Score = 38 (18.4 bits), Expect = 7.6e-52, Sum P(5) = 7.6e-52
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 2171 ETVQEEEKTELSCEKQPIGSSVDDES 2196
E+ EEE+ + E P + D+ES
Sbjct: 2197 ESDSEEEEVQKRAEGTPHMKAYDEES 2222
Score = 37 (18.1 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 528 KRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKS 567
K E E T+E EK + SDS E + S
Sbjct: 2858 KGGTEPSPLHENSTDEGSEKADASSGSDSTSSSSEDSDSS 2897
Score = 37 (18.1 bits), Expect = 3.7e-54, Sum P(4) = 3.7e-54
Identities = 11/55 (20%), Positives = 23/55 (41%)
Query: 2348 GPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSE 2402
G + + +EE + D+E G + + + E D G+ + ++SE
Sbjct: 2838 GSSKSVEVKEEDSRVRDQEDKGGTEPSPLHENSTDEGSEKADASSGSDSTSSSSE 2892
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 643 (231.4 bits), Expect = 6.8e-58, Sum P(4) = 6.8e-58
Identities = 155/408 (37%), Positives = 226/408 (55%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++ +K V KF+VLLT+YE + D+ L I+W +++DE HR+KN K L
Sbjct: 191 VFRMKKEVQIKFHVLLTSYELITI--DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 248
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
Y+ ++LLLTGTP FN+ E F + F D S +
Sbjct: 249 YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ-- 299
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVE 187
I +LH +L P +LRRLK V +P K E +VR E S Y K ++ R
Sbjct: 300 --------IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 351
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEM 246
E L S G S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +
Sbjct: 352 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 411
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN
Sbjct: 412 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 471
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
+ F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF
Sbjct: 472 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 531
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
T +VEE++ A+ K+ + + + G + S ++ L+ +L+
Sbjct: 532 VTRASVEERITQVAKRKMMLTHLVVRPGL--GSKSGSMTKQELDDILK 577
Score = 47 (21.6 bits), Expect = 6.8e-58, Sum P(4) = 6.8e-58
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 747 NEQPQSESLNPSGGESTATDGNVSSIPTAPVPDS 780
N + + L P G E + +SS P PVP S
Sbjct: 904 NGKYSTPDLIPEGPEGKKSGEVISSDPNTPVPAS 937
Score = 45 (20.9 bits), Expect = 6.8e-58, Sum P(4) = 6.8e-58
Identities = 28/126 (22%), Positives = 49/126 (38%)
Query: 445 ESVDKQRREEEMATWRKLIRGLGTDGE-PLPPLPSRLVTDDDLKALYEAMK---IYDAPK 500
E D + R E + R+ R L +D + PLPPL +R+ + ++ + + +
Sbjct: 762 EDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMR 821
Query: 501 TGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLK 560
G+ P H D RGK +E R+Y + E + + +
Sbjct: 822 WGMPPQDAFN---SHWLVRDL----RGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVP 874
Query: 561 EEGLEK 566
EGL +
Sbjct: 875 REGLSR 880
Score = 44 (20.5 bits), Expect = 6.8e-58, Sum P(4) = 6.8e-58
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 2302 PVGSEKESIASAVPLDESKGPDAEVSSQTA-IEG--GGVVSIPVPEEADGPASFLAAEEE 2358
P+G + A +DE K P A+ Q ++ + + ++ + PAS A EE
Sbjct: 945 PLGLPDKMEAQLGYMDE-KDPGAQKPRQPLEVQALPAALDRVESEDKHESPASKERAREE 1003
Query: 2359 KNECSDKEP 2367
+ E ++K P
Sbjct: 1004 RPEETEKAP 1012
Score = 42 (19.8 bits), Expect = 4.6e-57, Sum P(5) = 4.6e-57
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 522 QHYGRGKRAREVRSY------EEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
++ G+GKR R+ +Y +++W +E + Q+E S + ++E E+
Sbjct: 720 RNLGKGKRIRKQVNYNDASQEDQEWQDELSDN--QSEYSIGSEDEDEDFEE 768
Score = 38 (18.4 bits), Expect = 3.9e-56, Sum P(5) = 3.9e-56
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESV 2034
+S++ +K+ E + +TP+ EG E S DP V
Sbjct: 890 MSLVRKKVQEFEHVNGKYSTPDLIPEGPE-GKKSGEVISSDPNTPV 934
Score = 37 (18.1 bits), Expect = 2.9e-57, Sum P(2) = 2.9e-57
Identities = 8/45 (17%), Positives = 23/45 (51%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E +D + + E+++E ++ P G S + ++ ++ +P+
Sbjct: 747 ELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPL 791
Score = 37 (18.1 bits), Expect = 4.6e-57, Sum P(5) = 4.6e-57
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 704 QPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDI 737
+P+G+ R QS Q+ R K + +L +I
Sbjct: 769 RPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNI 802
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 640 (230.4 bits), Expect = 8.0e-58, Sum P(2) = 8.0e-58
Identities = 163/415 (39%), Positives = 224/415 (53%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
LY++ + KFNVLLTTYEY++ D+ +L +W ++ +DE HR+KNA L LK
Sbjct: 457 LYNQNR--KPKFNVLLTTYEYILK--DKNELGAFKWQFLAVDEAHRLKNAESSLYEALKG 512
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
++ S+RLL+TGTP F ++ FE+ D+ +
Sbjct: 513 FKVSNRLLITGTPLQNNVKELAALCNFLMPGKFTIDQEID------FETI-DSEQEQY-- 563
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENL 190
I L + + PF+LRRLK VE LP K ER++R E S Q K + +N
Sbjct: 564 --------IKDLQKKISPFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNIITKNY 615
Query: 191 GSI--GNSKGR-SVHNSVMELRNICNHPYLSQLHAEEV-DTL-IP--KHYLPPIVRLCGK 243
++ GN + S+ N + EL+ NHPYL ++V D P ++ L IV GK
Sbjct: 616 AALNAGNRGSQISLLNIMSELKKASNHPYLFDGAEDKVLDKAGSPSRENTLKGIVMSSGK 675
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
+ +L++LL +L+ HRVL FS M R+LD++ DY+ K Y++ RLDG R ID
Sbjct: 676 MVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKRKIAIDH 735
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN S F FLLS RAGG+G+NL ADTVIIFD+DWNPQ DLQA ARAHRIGQK V V
Sbjct: 736 FNAPGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSV 795
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFD----NNTSAEDRREYLESLLR 414
RF + TVEEQ+ A K+ + I+ G D N + E L +L+
Sbjct: 796 YRFVSKDTVEEQILERARKKMVLEYAIISLGITDPSAKNGSKTEPSTNELSQILK 850
Score = 54 (24.1 bits), Expect = 8.0e-58, Sum P(2) = 8.0e-58
Identities = 24/108 (22%), Positives = 47/108 (43%)
Query: 2290 DVEEEKIEGFSKPVGSEKESIASAVPLDESKGP-DAEVSSQTAIEGGGVVSI------PV 2342
D E + G S PVGS ++ I + P+ + G + ++ + GG + PV
Sbjct: 1216 DEESDSSVGGSTPVGSVRKRIRKSTPVPHNSGSSNGSHNTLSGNSNGGTANNTGKHRKPV 1275
Query: 2343 P-EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMD 2389
E ++ A ++++ S +G + + E ++ E +E MD
Sbjct: 1276 KLESSEKLAKQKRMNQQRSSASASPALGHAKFKEEKRDLE---YESMD 1320
Score = 51 (23.0 bits), Expect = 7.4e-56, Sum P(3) = 7.4e-56
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 840 GGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGG-----------LRLSKSVSM 888
GG TP +++ S P+ S N S N++GG ++L S +
Sbjct: 1224 GGSTPVGSVRKRIRKSTPVPHNSGSSNGSHNTLSGNSNGGTANNTGKHRKPVKLESSEKL 1283
Query: 889 GKQDALSQELSN 900
KQ ++Q+ S+
Sbjct: 1284 AKQKRMNQQRSS 1295
Score = 41 (19.5 bits), Expect = 8.2e-55, Sum P(3) = 8.2e-55
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 1495 STVSVKTDVGNHPQNVEPTSASPERSGPQNSA 1526
S+V T VG+ + + ++ P SG N +
Sbjct: 1221 SSVGGSTPVGSVRKRIRKSTPVPHNSGSSNGS 1252
Score = 38 (18.4 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 2341 PVPEEADGPASFLAAEEEK 2359
PVP E + A ++A ++EK
Sbjct: 1064 PVPGEPNQTALWIAKKKEK 1082
Score = 38 (18.4 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 2339 SIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEP 2380
S+ + D + L EE + PVGS +I P
Sbjct: 1200 SVHLGRRVDYLFTLLRDEESDSSVGGSTPVGSVRKRIRKSTP 1241
Score = 37 (18.1 bits), Expect = 7.4e-56, Sum P(3) = 7.4e-56
Identities = 19/91 (20%), Positives = 37/91 (40%)
Query: 1750 DIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSE 1809
D+E +M+ G +++ + + K LD+H ++L G I E +
Sbjct: 1313 DLEYESMDEGSCKSIMQPVTSSLHKLHKGSKGLDKHEWAKILKSELLNIGDFI--ESEVS 1370
Query: 1810 NMGEKDDISSEHAFG-SSLVLQDKASEAEIG 1839
+ KD + +H + + L K +IG
Sbjct: 1371 KVQNKDKLR-KHLWSFTGLYWPSKVPSNKIG 1400
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 645 (232.1 bits), Expect = 1.0e-57, Sum P(3) = 1.0e-57
Identities = 151/378 (39%), Positives = 212/378 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
+F ++TT+E ++ +L+ I+W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 970 RFQAIITTFEMILGGCG--ELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLT 1027
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1028 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF-------GDLKTEEQ----------VQ 1070
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE +L K E ++ E + QK + + E+N + G++
Sbjct: 1071 KLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQT 1130
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTLIPK---HYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL + E++ DT P +L +++ GKL ++D
Sbjct: 1131 NVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLID 1190
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPK+KA H+VL FS M R LD++EDYL K+Y Y R+DG G R A ID+F++ D
Sbjct: 1191 KLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPD 1250
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1251 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVT 1310
Query: 369 VQTVEEQVRASAEHKLGV 386
+ E ++ A KLG+
Sbjct: 1311 RNSYEREMFDRASLKLGL 1328
Score = 59 (25.8 bits), Expect = 1.0e-57, Sum P(3) = 1.0e-57
Identities = 42/159 (26%), Positives = 71/159 (44%)
Query: 1290 IEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSV 1349
+E E++ +QN+ E GE + SS + +ST A NT++ N L+ + +
Sbjct: 2754 LEGKKERTESQNS-ENGGENSVSSSPSTSSTAAL------NTAAAANPLALNPLLLSNIL 2806
Query: 1350 TPAMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVE 1409
P M PG ++ + + QS T D + K KN L G + +EV K E+ D +
Sbjct: 2807 YPGMLLTPGLNLHMPT-LSQSNT-FDVQ-KNKNNDL-GSS--KSLEV-KEEDSRVRDQED 2859
Query: 1410 KLEDTVDDHSLVKELIHRSPDHSDMVIGN-VPGNTSEDS 1447
K + L + + +D G+ ++SEDS
Sbjct: 2860 K--GGTEPSPLNENSTDEGSEKADASSGSDSTSSSSEDS 2896
Score = 59 (25.8 bits), Expect = 1.1e-54, Sum P(4) = 1.1e-54
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 1795 DNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPR 1853
D +G V PE+K KDDI + + LV+ D + GD+I P + R
Sbjct: 1728 DYMDGDVEDPEYKPAPAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTR 1786
Score = 58 (25.5 bits), Expect = 1.0e-57, Sum P(3) = 1.0e-57
Identities = 25/137 (18%), Positives = 55/137 (40%)
Query: 700 STPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSG 759
S P+ PK +G+Q +G+ ++ A ++ + P+P + +Q + + S
Sbjct: 2077 SEPVSPKNGVLPQATGDQKSGGKGETDRRMVAARTEPLT---PNPASKKQRVHKRGSESS 2133
Query: 760 GESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXX 819
ES + S + S S S +SG+ SS+ + S +++ +++
Sbjct: 2134 SESDSDSERSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSS 2193
Query: 820 XXXXXXXXMQTKGQSRK 836
+ + Q R+
Sbjct: 2194 SSSEESDSEEEEVQKRE 2210
Score = 55 (24.4 bits), Expect = 3.7e-56, Sum P(3) = 3.7e-56
Identities = 33/154 (21%), Positives = 52/154 (33%)
Query: 748 EQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAV----KGQSGTIDPSSAVAALN 803
E+PQS E T T + S P +P + V P A G G D VAA
Sbjct: 2056 EEPQSSEEESMSSEETRT--LIKSEPVSP-KNGVLPQATGDQKSGGKGETD-RRMVAART 2111
Query: 804 SELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSA 863
L N A+ ++ S ++ + + S+
Sbjct: 2112 EPLTPNPASKKQRVHKRGSESSS--ESDSDSERSSCSSRSSSSSSSSSSCSHSRSGSSSS 2169
Query: 864 GPESKSNLQSENNSGGLRLSKSVSMGKQDALSQE 897
S S+ S ++S S S S +++ S+E
Sbjct: 2170 SSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEE 2203
Score = 53 (23.7 bits), Expect = 2.1e-55, Sum P(4) = 2.1e-55
Identities = 31/153 (20%), Positives = 61/153 (39%)
Query: 833 QSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQD 892
QS+ S TP + + AL + P++ + ++K + + L + +++
Sbjct: 2005 QSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAKGIILEDMKVKSENLKEEPQSSEEE 2064
Query: 893 ALS-QELSNKIQVQPCGVATSA-DVAGPDQKPA---EQSVRVVQSN-QPINL-PATHDSS 945
++S +E I+ +P A DQK E R+V + +P+ PA+
Sbjct: 2065 SMSSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKGETDRRMVAARTEPLTPNPASKKQR 2124
Query: 946 SQPSGSTPAQVPSMDLGNVASDTKEVLSENSSS 978
GS + D + ++ S +SSS
Sbjct: 2125 VHKRGSESSSESDSDSERSSCSSRSSSSSSSSS 2157
Score = 52 (23.4 bits), Expect = 7.6e-56, Sum P(3) = 7.6e-56
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 1444 SEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDV 1503
SE SS+ ++ S+ S S + + HSR SGS +S + CS+ S +
Sbjct: 2130 SESSSESDSDSERSSCSSRSSSSSSSSSSCS-HSR-----SGSSSSSSSSCSSASSSSSS 2183
Query: 1504 GNHPQNVEPTSASPE 1518
+ + +S+S E
Sbjct: 2184 SSSSSSSSSSSSSEE 2198
Score = 52 (23.4 bits), Expect = 7.6e-56, Sum P(3) = 7.6e-56
Identities = 29/137 (21%), Positives = 51/137 (37%)
Query: 1082 TPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADV 1141
TP + ++R K+GS S S D++ + S S S S + S S+ ++
Sbjct: 2115 TPNPA-SKKQRVHKRGSESSSESDS---DSERSSCSSRSSSSSSSSSSCS-HSRSGSSSS 2169
Query: 1142 NDVARVMKEIFSETCSSKAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVT 1201
+ + S + SS + + SS +E D V K ++ S++
Sbjct: 2170 SSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGTPHV--KAYDEESVASLS 2227
Query: 1202 PTVETPPPGFNSPNENP 1218
T + F N P
Sbjct: 2228 TTQDETQDSFQMNNGTP 2244
Score = 49 (22.3 bits), Expect = 2.1e-55, Sum P(4) = 2.1e-55
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 1948 SSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLA 2007
SSS + + SS SS S S+E+ +E + P + ASL+
Sbjct: 2168 SSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGTPHVKAYDEESVASLS 2227
Query: 2008 TPEEKTEGSEK----DPDSSFAAQ 2027
T +++T+ S + P+S++ Q
Sbjct: 2228 TTQDETQDSFQMNNGTPESAYILQ 2251
Score = 49 (22.3 bits), Expect = 6.3e-54, Sum P(6) = 6.3e-54
Identities = 51/212 (24%), Positives = 82/212 (38%)
Query: 1861 ELVDEAGDHMGVSHSPVHVV----------EREKSEELGLPSLSSATKEEKIDGSLDKDP 1910
+L+ A H GVS + H++ +R S+ S +S ++ +L P
Sbjct: 1971 DLLIGAAKH-GVSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASP 2029
Query: 1911 DSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSDFCQPSS--SLAPWEAKIDGSSEKDPVS 1968
++L L D+KG I + M V ENL + Q S S++ E + SE PVS
Sbjct: 2030 LTSLPRLLDAKGIILEDMK------VKSENLKEEPQSSEEESMSSEETRTLIKSE--PVS 2081
Query: 1969 SQS-VLEGSKETVAEAGD-QMDISIMPEKLPEHLDIPASLATPEEKT---EGSEKDPDSS 2023
++ VL + G + D ++ + PAS K SE D DS
Sbjct: 2082 PKNGVLPQATGDQKSGGKGETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSESDSDSE 2141
Query: 2024 FAAQEDPKESVVEAGDQMGVSLGGATVMEKSS 2055
++ S + S G++ SS
Sbjct: 2142 RSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSS 2173
Score = 48 (22.0 bits), Expect = 9.6e-54, Sum P(4) = 9.6e-54
Identities = 40/192 (20%), Positives = 62/192 (32%)
Query: 1800 GVIVPEHK--SENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSG 1857
G+I+ + K SEN+ E+ S E + S SE PQ G G
Sbjct: 2041 GIILEDMKVKSENLKEEPQSSEEESMSSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKG 2100
Query: 1858 VVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVL 1917
D + A ++ +P +R S S + E S S+
Sbjct: 2101 ETDRRMVAARTEP-LTPNPASKKQRVHKRGSESSSESDSDSERSSCSSRSSSSSSSSSSC 2159
Query: 1918 EDSK-GSIGDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGS 1976
S+ GS C S + S SSS + E+ + + + V
Sbjct: 2160 SHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGTPHVKAYD 2219
Query: 1977 KETVAEAGDQMD 1988
+E+VA D
Sbjct: 2220 EESVASLSTTQD 2231
Score = 47 (21.6 bits), Expect = 3.7e-56, Sum P(3) = 3.7e-56
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 2400 TSEGMGGPSPPLVIAEDKTENEIEEDPVVNSVAVEESKGSEA 2441
T E G S L +++TE++ E+ NSV+ S S A
Sbjct: 2743 TEEKKGNDSKELEGKKERTESQNSENGGENSVSSSPSTSSTA 2784
Score = 47 (21.6 bits), Expect = 5.9e-54, Sum P(4) = 5.9e-54
Identities = 35/156 (22%), Positives = 63/156 (40%)
Query: 1398 KPEN-KTDGDSVEKLEDTVDDHSLVKELIHRSP-DHSDMVIGNVPGNTSEDSSKMPLETP 1455
K EN K + S E E+++ + LI P + V+ G+ + K +
Sbjct: 2050 KSENLKEEPQSSE--EESMSSEE-TRTLIKSEPVSPKNGVLPQATGD-QKSGGKGETDRR 2105
Query: 1456 LIMKSTEG--PSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDVGNHPQNVEPT 1513
++ TE P+ + K V H R + S S +S +E S+ S ++ + +
Sbjct: 2106 MVAARTEPLTPNPASKKQRV--HKRGSE--SSSESDSDSERSSCSSRSSSSSSSSS---- 2157
Query: 1514 SASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDA 1549
S S RSG +S+ C + S + + S +
Sbjct: 2158 SCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSS 2193
Score = 45 (20.9 bits), Expect = 1.1e-54, Sum P(4) = 1.1e-54
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 1960 GSSEKDPVSSQSVLEGSKETVAEAG 1984
G +E P++ S EGS++ A +G
Sbjct: 2861 GGTEPSPLNENSTDEGSEKADASSG 2885
Score = 43 (20.2 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 37/198 (18%), Positives = 71/198 (35%)
Query: 713 QSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGN-VSS 771
QSG +P ++I L P +++ G PK+ ++ + + +T+ GN + +
Sbjct: 2608 QSGF-LPESMYERI-LTGPVVREEVSRRGRRPKSGIA-KATAAAAAAATATSASGNPLLA 2664
Query: 772 IPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTK 831
P D + A++ + A L + L++
Sbjct: 2665 NGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMG-MPAGLSSGGEAKNMAAMFPMLLSGMT 2723
Query: 832 GQSRKTQSGGVT--PRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMG 889
G GG+ P G + G+ S G + ++ Q+ N G +S S S
Sbjct: 2724 GLPNLLGMGGLLTKPTESGTEEKKGND--SKELEGKKERTESQNSENGGENSVSSSPSTS 2781
Query: 890 KQDALSQELS-NKIQVQP 906
AL+ + N + + P
Sbjct: 2782 STAALNTAAAANPLALNP 2799
Score = 42 (19.8 bits), Expect = 6.3e-54, Sum P(6) = 6.3e-54
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 2246 SASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSS-SDVEEEKI---EGFSK 2301
S+SS S + +++ A + + S SD EEE++ EG
Sbjct: 2155 SSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGTPH 2214
Query: 2302 PVGSEKESIAS-AVPLDESK 2320
++ES+AS + DE++
Sbjct: 2215 VKAYDEESVASLSTTQDETQ 2234
Score = 42 (19.8 bits), Expect = 2.0e-53, Sum P(6) = 2.0e-53
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 2348 GPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSE 2402
G + L +EE + D+E G + ++ + E D G+ + ++SE
Sbjct: 2840 GSSKSLEVKEEDSRVRDQEDKGGTEPSPLNENSTDEGSEKADASSGSDSTSSSSE 2894
Score = 41 (19.5 bits), Expect = 7.6e-56, Sum P(3) = 7.6e-56
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 879 GLRLSKSVSMGKQDALSQELSNKIQVQP-----CGVATSADVAGPDQKPAEQSVRVVQSN 933
G+ L+ +++ LSQ SN VQ G + S +V D + +Q +
Sbjct: 2809 GMLLTPGLNL-HMPTLSQ--SNTFDVQKNKNNDLGSSKSLEVKEEDSRVRDQEDKGGTEP 2865
Query: 934 QPINLPATHDSSSQPSGST 952
P+N +T + S + S+
Sbjct: 2866 SPLNENSTDEGSEKADASS 2884
Score = 41 (19.5 bits), Expect = 1.4e-54, Sum P(4) = 1.4e-54
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 1808 SENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGF---SPRSMSGVVDELVD 1864
S + SS + SS + + E E+ R P V + S S+S DE D
Sbjct: 2176 SASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGTPHVKAYDEESVASLSTTQDETQD 2235
Query: 1865 EAGDHMGVSHS 1875
+ G S
Sbjct: 2236 SFQMNNGTPES 2246
Score = 40 (19.1 bits), Expect = 9.7e-56, Sum P(3) = 9.7e-56
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 1213 SP-NENPGELTGTKNDASVRGDHTPVSGHTLASKTE 1247
SP NEN + K DAS D T S S E
Sbjct: 2866 SPLNENSTDEGSEKADASSGSDSTSSSSEDSDSSNE 2901
Score = 40 (19.1 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 34/165 (20%), Positives = 62/165 (37%)
Query: 728 LVLPAASDDIPSPGPDPKTNE--QPQSESLNP-SGGE-STATDGNVSSIPTAPVPDSVSP 783
L P S G D K E + ++ES N +GGE S ++ + SS + +P
Sbjct: 2735 LTKPTESGTEEKKGNDSKELEGKKERTESQNSENGGENSVSSSPSTSSTAALNTAAAANP 2794
Query: 784 SAVKGQ--SGTIDPSSAVA-ALNSELNTNLATAXXXXXXXXXX----XXXXMQTKGQSRK 836
A+ S + P + LN + T L+ + ++ K + +
Sbjct: 2795 LALNPLLLSNILYPGMLLTPGLNLHMPT-LSQSNTFDVQKNKNNDLGSSKSLEVKEEDSR 2853
Query: 837 TQS----GGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNS 877
+ GG P + +D S+G +S S+ +++S
Sbjct: 2854 VRDQEDKGGTEPSPLNENSTDEGSEKADASSGSDSTSSSSEDSDS 2898
Score = 39 (18.8 bits), Expect = 1.2e-55, Sum P(3) = 1.2e-55
Identities = 13/59 (22%), Positives = 30/59 (50%)
Query: 867 SKSNL--QSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPA 923
S+SN +N + L SKS+ + ++D+ ++ +K +P + ++ G ++ A
Sbjct: 2824 SQSNTFDVQKNKNNDLGSSKSLEVKEEDSRVRDQEDKGGTEPSPLNENSTDEGSEKADA 2882
Score = 39 (18.8 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 25/132 (18%), Positives = 51/132 (38%)
Query: 850 RQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGV 909
R + S P+S + G ++ ++ G + V+ + S K +V G
Sbjct: 2072 RTLIKSEPVSPKN-GVLPQATGDQKSGGKGETDRRMVAARTEPLTPNPASKKQRVHKRGS 2130
Query: 910 ATSADVAGPDQKPA--EQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASD 967
+S++ ++ + +S S+ + + SSS S + A S + +S
Sbjct: 2131 ESSSESDSDSERSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSS 2190
Query: 968 TKEVLSENSSSK 979
+ SE S S+
Sbjct: 2191 SSSSSSEESDSE 2202
Score = 39 (18.8 bits), Expect = 4.7e-54, Sum P(4) = 4.7e-54
Identities = 14/71 (19%), Positives = 26/71 (36%)
Query: 2355 AEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIA 2414
++ E++ CS + SS S S + A + ++S S
Sbjct: 2138 SDSERSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSE 2197
Query: 2415 E-DKTENEIEE 2424
E D E E+++
Sbjct: 2198 ESDSEEEEVQK 2208
Score = 39 (18.8 bits), Expect = 1.9e-53, Sum P(3) = 1.9e-53
Identities = 12/52 (23%), Positives = 17/52 (32%)
Query: 743 DPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTID 794
D + +Q PS +TD + DS S S+ S D
Sbjct: 2851 DSRVRDQEDKGGTEPSPLNENSTDEGSEKADASSGSDSTSSSSEDSDSSNED 2902
Score = 38 (18.4 bits), Expect = 1.1e-54, Sum P(4) = 1.1e-54
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 1766 SSSKDIIAESAKADVVLDEHGKVQ 1789
S++KD +AE ++A+ DE K++
Sbjct: 1460 SATKDELAELSEAESEGDEKPKLR 1483
Score = 38 (18.4 bits), Expect = 2.2e-54, Sum P(3) = 2.2e-54
Identities = 32/171 (18%), Positives = 71/171 (41%)
Query: 1215 NENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKA--QAGRIENIANSSPDDKS 1272
+EN E + + S+ + T TL K+E + P+N QA + D+
Sbjct: 2051 SENLKEEPQSSEEESMSSEET----RTLI-KSEPVSPKNGVLPQATGDQKSGGKGETDRR 2105
Query: 1273 L------PMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEE-TPVSSEAPASTEAFEQ 1325
+ P+ PN P + K +S ++++ + + + SS + +S+ +
Sbjct: 2106 MVAARTEPLTPN----PASKKQRVHKRGSESSSESDSDSERSSCSSRSSSSSSSSSSCSH 2161
Query: 1326 EKV----TNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGT 1372
+ +++SS + + SS + S + + ++ D E+ ++ GT
Sbjct: 2162 SRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGT 2212
Score = 37 (18.1 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 528 KRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKS 567
K E E T+E EK + SDS E + S
Sbjct: 2860 KGGTEPSPLNENSTDEGSEKADASSGSDSTSSSSEDSDSS 2899
Score = 37 (18.1 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 18/84 (21%), Positives = 31/84 (36%)
Query: 640 EKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQPTTAFVPVAPGSQSASACP 699
E D+ + +S+ +S S H G + SS + + A S S+S+
Sbjct: 2135 ESDSDSERSSCSSRS----SSSSSSSSSCSHSRSGSSSSSSSSCSS---ASSSSSSSSSS 2187
Query: 700 STPMQPKGRGRRIQSGEQVPRRRG 723
S+ E+V +R G
Sbjct: 2188 SSSSSSSSSEESDSEEEEVQKREG 2211
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 636 (228.9 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 178/571 (31%), Positives = 286/571 (50%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ L I+W +++DE HR+KN K L Y+ H+LLLT
Sbjct: 905 KFHVLLTSYELITI--DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 962
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP FN+ E F + F D S + I
Sbjct: 963 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ----------IK 1005
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L S G
Sbjct: 1006 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGN 1065
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLCGKLEMLDRLLPKLKA 256
S+ N +M+L+ CNHPYL + A E L Y +++ GKL +L ++L KLK
Sbjct: 1066 QVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKE 1125
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L ++ Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1126 QGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLL 1185
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHRIGQ V++ RF T +VEE++
Sbjct: 1186 STRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERI 1245
Query: 377 RASAEHKLGVANQSITAGFFDN--NTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXX 434
A+ K+ + + + G + S ++ + L+ E K+E
Sbjct: 1246 TQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIH 1305
Query: 435 XRSES-------EIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT-DDDL 486
+E+ D + D Q E ++++ K+ + + + + + + ++ ++++
Sbjct: 1306 YDNEAIARLLDRNQDATDDTDVQNMNEYLSSF-KVAQYVVREEDKIEEIEREIIKQEENV 1364
Query: 487 KALYEAMKI---YDAPKTGVSPNVGV-KRKGEHLGALDTQHYGRGKRAREVRSYEEQWTE 542
Y + Y+ + ++ N+G KR + + D + ++ EE+ +
Sbjct: 1365 DPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEE--D 1422
Query: 543 EEFEKMCQAESSDSPKLKEEGLEKSLPTVVS 573
E+F++ + +L+ E +K LP +++
Sbjct: 1423 EDFDERPEGRRQSKRQLRNEK-DKPLPPLLA 1452
Score = 74 (31.1 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 38/139 (27%), Positives = 56/139 (40%)
Query: 1188 AKKQSSDDKTCSVTP---TVETP---PPGFNSPNEN-PGELTGTKNDASVRGDHTPVSGH 1240
+ + SS KT TP T +P P +P+E G T + D + + P
Sbjct: 1579 SSRASSPTKTSPTTPEASTTNSPCTSKPATPAPSEKGDGVRTLLEKDDTENPEEKPEKSS 1638
Query: 1241 TLASK--TEALKPENKAQAG-RIENIANSSPDDKSLPMVPNLETAP-PGFDIPIEKHNEQ 1296
+ K TE P G R+E+ DD P VP E P PG+ E+
Sbjct: 1639 KVGEKMETEIDSPSPAPSLGERLEHRKILLEDDA--PGVPG-EIEPEPGY----RGDREK 1691
Query: 1297 SRNQNNPEVKGEETPVSSE 1315
S ++ P +GEE P+ +
Sbjct: 1692 SASEPTPGERGEEKPLDGQ 1710
Score = 62 (26.9 bits), Expect = 7.6e-55, Sum P(4) = 7.6e-55
Identities = 24/80 (30%), Positives = 32/80 (40%)
Query: 678 SSQPTTAFVPVAP-GSQSASACPSTPMQP----KGRGRRI---QSGEQVPRRRGKKIGLV 729
+S PT P P S + S C S P P KG G R + + P + +K V
Sbjct: 1582 ASSPTKTS-PTTPEASTTNSPCTSKPATPAPSEKGDGVRTLLEKDDTENPEEKPEKSSKV 1640
Query: 730 LPAASDDIPSPGPDPKTNEQ 749
+I SP P P E+
Sbjct: 1641 GEKMETEIDSPSPAPSLGER 1660
Score = 56 (24.8 bits), Expect = 3.2e-54, Sum P(4) = 3.2e-54
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKG 788
+P PDP + + S + +P+ T + + ++ P P + +PS KG
Sbjct: 1565 MPELMPDPSADSKRSSRASSPTKTSPTTPEASTTNSPCTSKPATPAPSE-KG 1615
Score = 53 (23.7 bits), Expect = 1.3e-56, Sum P(2) = 1.3e-56
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E+ D + + EE++E D+ P G S+ + + + K P+
Sbjct: 1406 EDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPL 1450
Score = 45 (20.9 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 31/148 (20%), Positives = 59/148 (39%)
Query: 1972 VLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEK------TEGSEKDPDSSFA 2025
VL +E +++ + D++ +P L I A L E ++G+E P +F
Sbjct: 1916 VLNQLEELLSDM--KADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAFP 1973
Query: 2026 A---QEDPKESVVEAGDQMG-VSLGGATVMEKSSEDLAT-----PPLSLANEEEMIEGFD 2076
P + +G ++ GA + + T PP+ + E+EM+
Sbjct: 1974 PGPYATPPGYGAAFSAAPVGALAAAGANYSQMPAGSFITATTNGPPVLVKKEKEMVGALV 2033
Query: 2077 NDPTGISMAVMDSKECAAEAADQMCVSE 2104
+D G+ D KE A + +C+ +
Sbjct: 2034 SDGLGL-----DRKE--PRAGEVICIDD 2054
Score = 45 (20.9 bits), Expect = 4.4e-53, Sum P(4) = 4.4e-53
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 1486 SPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKC 1545
S +S T+ S + + N P +P + +P G + D +E P + E +
Sbjct: 1580 SRASSPTKTSPTTPEASTTNSPCTSKPATPAPSEKGDGVRTLLEKDDTENPEEKPEKSSK 1639
Query: 1546 PSDAIVNNLLETPLDIKSIG 1565
+ + + ++P S+G
Sbjct: 1640 VGEKMETEI-DSPSPAPSLG 1658
Score = 37 (18.1 bits), Expect = 7.6e-55, Sum P(4) = 7.6e-55
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
+ ASE G+R +E +DG R + E GD +G V+ ++ LG
Sbjct: 1690 EKSASEPTPGERGEEKPLDGQEHR------ERTEGETGD-LGKRED----VKADRELRLG 1738
Query: 1890 LPS---LSSATKEEKID 1903
P + +EEK++
Sbjct: 1739 PPRDEPRPNGRREEKVE 1755
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 684 (245.8 bits), Expect = 1.2e-57, Sum P(5) = 1.2e-57
Identities = 166/411 (40%), Positives = 232/411 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 536 KFDALITTFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 593
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S +F + F GD + +
Sbjct: 594 GTPLQNTVEELFSLLHFLEPSQFPSESEFLKDF-------GDLKTEEQ----------VQ 636
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 637 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHT 696
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEVDT-------LIPKHY-LPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ T +IP + L +VR GKL ++D
Sbjct: 697 NMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLID 756
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 757 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 816
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 817 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 876
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAED-RREYLESLLRE 415
+ E ++ A KLG+ QS++ G N T + ++ +E LLR+
Sbjct: 877 RNSYEREMFDKASLKLGLDKAVLQSMS-GRDGNITGIQQFSKKEIEDLLRK 926
Score = 56 (24.8 bits), Expect = 1.2e-57, Sum P(5) = 1.2e-57
Identities = 25/125 (20%), Positives = 56/125 (44%)
Query: 1245 KTEALKPENKAQAGRIEN--IANS--SPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQ 1300
+T A P ++ ++E+ +A S +P D + + P+ T ++P K ++ +
Sbjct: 1628 ETAAQVPSLESLTLKLEHEVVARSRPTPQDYEMRVAPSDTTPLVSRNVPPVKLEDEDDSD 1687
Query: 1301 NNPEVK-----GEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMET 1355
+ ++ + SS + +ST+ E EK S+ + + L ++ S+T + +
Sbjct: 1688 SELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLSADRSRSKLYDEESLLSLTMSQDG 1747
Query: 1356 APGFD 1360
P D
Sbjct: 1748 FPNED 1752
Score = 53 (23.7 bits), Expect = 6.1e-57, Sum P(6) = 6.1e-57
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 1416 DDHSLVKELIHRSPDH-SDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVA 1474
DD ++ E HR D+ SD+V G ED PL+ P + EG + M ++++
Sbjct: 1281 DDKAIAAE--HRVLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEIS 1338
Score = 50 (22.7 bits), Expect = 3.1e-57, Sum P(5) = 3.1e-57
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSEN 975
P +KP E++ V S + + L H+ ++ S TP ++ SDT ++S N
Sbjct: 1621 PVEKPPEETAAQVPSLESLTLKLEHEVVAR-SRPTPQDY---EMRVAPSDTTPLVSRN 1674
Score = 43 (20.2 bits), Expect = 6.1e-57, Sum P(6) = 6.1e-57
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 1990 SIMPEKLPEHLDIPASL----ATPEEKTEGSEKDPDSSFAAQEDPKESVVEA 2037
++ P KL + D + L +P + S SS ED KE + A
Sbjct: 1674 NVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLSA 1725
Score = 42 (19.8 bits), Expect = 1.2e-57, Sum P(5) = 1.2e-57
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R R++ S ++ + TE + E +C+A
Sbjct: 1073 YGWG-RWRDILSHGRFKRRMTERDVETICRA 1102
Score = 40 (19.1 bits), Expect = 3.1e-57, Sum P(5) = 3.1e-57
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 1218 PGEL---TGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQ---AG--RIENIANSSPD 1269
PG + +G K +R D + + T +L N Q +G + ++ +SS
Sbjct: 2025 PGPIATDSGKKRARRMRPDLSKMMALMQGGGTGSLSLHNTFQHSSSGLQSVSSLGHSSAT 2084
Query: 1270 DKSLPMVP 1277
SLP VP
Sbjct: 2085 SASLPFVP 2092
Score = 40 (19.1 bits), Expect = 3.3e-56, Sum P(5) = 3.3e-56
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 732 AASDDIPSPG---PDPKTNEQPQSES------LNPSGGESTATDGNVSSIPTAPVPDSVS 782
A SD P P K ++ S+S L+PS S+++ + SS +
Sbjct: 1663 APSDTTPLVSRNVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEK 1722
Query: 783 PSAVKGQSGTIDPSSAVAALNSE 805
SA + +S D S ++ S+
Sbjct: 1723 LSADRSRSKLYDEESLLSLTMSQ 1745
Score = 38 (18.4 bits), Expect = 1.2e-57, Sum P(5) = 1.2e-57
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEE 2357
GP + ++ G PVP A+ +A EE
Sbjct: 1810 GPGNHLLDSPSLTPGEYGDSPVPTPRSSSAASMAEEE 1846
Score = 38 (18.4 bits), Expect = 1.2e-57, Sum P(5) = 1.2e-57
Identities = 12/52 (23%), Positives = 26/52 (50%)
Query: 1714 GDKKADCKMEPDCLVASDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALL 1765
G++K ++E C+ + ++++L R + + DG + + E P A L
Sbjct: 1906 GNRKKLVELEVQCMEEPNHLDVDLETRIPVINKVDGTLLVG--EDAPRRAEL 1955
Score = 38 (18.4 bits), Expect = 5.4e-57, Sum P(4) = 5.4e-57
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 646 GQSTSASASLPXXXXXXXXXXXAQHV 671
G S++ SASLP + HV
Sbjct: 2079 GHSSATSASLPFVPFVMGGAASSPHV 2104
Score = 37 (18.1 bits), Expect = 1.2e-57, Sum P(5) = 1.2e-57
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 2400 TSEGMGGPSPPLVIAEDKTENEIEED 2425
T+ G PPL ED+ + + ++D
Sbjct: 2141 TTSGTALRLPPLQPEEDEDDEDEDDD 2166
Score = 37 (18.1 bits), Expect = 2.5e-56, Sum P(6) = 2.5e-56
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 2061 PPLSLANEEEMIEGFDNDPTGISMAVMDSKECAAEAADQMCVSEGCVVVTEKLSED 2116
PP+ L +E++ D S + S ++ + D+ SE EKLS D
Sbjct: 1676 PPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDE---SED--EKEEKLSAD 1726
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 657 (236.3 bits), Expect = 1.2e-57, Sum P(5) = 1.2e-57
Identities = 159/410 (38%), Positives = 224/410 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 1077 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 1134
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1135 GTPLQNTVEELFSLLHFLEPGRFPSETTFMQEF-------GDLKTEEQ----------VQ 1177
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 1178 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQA 1237
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTL---IPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ +T P L +++ GKL ++D
Sbjct: 1238 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLID 1297
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1298 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPD 1357
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1358 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1417
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
+ E ++ A KLG+ QS++ N + ++ +E LLR+
Sbjct: 1418 RNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRK 1467
Score = 66 (28.3 bits), Expect = 1.2e-57, Sum P(5) = 1.2e-57
Identities = 35/178 (19%), Positives = 68/178 (38%)
Query: 1100 PSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADVNDVARVMKEIFSETCSSK 1159
P I + V + K + +++K GS+ + + K + + D+A K+ + C ++
Sbjct: 2157 PPIVPSTPVQEEKSTEQTESKVE---GSENPAAKEKSDIKEETDIAD--KDT-KQDCDAE 2210
Query: 1160 AKTGD-----SSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTC-SVTPTVETPPPGFNS 1213
A+TG + D + +K DDK+ S P G N
Sbjct: 2211 AETGSVKCELKDIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGAVSQGKNF 2270
Query: 1214 PNENPGELTGTKN---DASVRGDHTPVSGHTLASKTEALK--PENKAQAGRIENIANS 1266
E+ ++ ++ D D P L +T A P+++ R++NI +
Sbjct: 2271 DEESNASMSTARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEA 2328
Score = 57 (25.1 bits), Expect = 3.3e-56, Sum P(5) = 3.3e-56
Identities = 35/122 (28%), Positives = 53/122 (43%)
Query: 1808 SENMG--EKDDISSEHAFGSSLVLQDKASEAEIGD-RIDEPQVD---GFSPRSMSGVVDE 1861
SEN EK DI E QD +EAE G + + ++ P+S+S E
Sbjct: 2181 SENPAAKEKSDIKEETDIADKDTKQDCDAEAETGSVKCELKDIEMSTDVDPKSISEKGSE 2240
Query: 1862 LVDEA----GDHMGVSHSP-VHVVEREKS-EELGLPSLSSATKEEKIDGSLDKDPDSNLV 1915
+E D S P V + K+ +E S+S+A ++E DG +D D ++V
Sbjct: 2241 EDEEEKLDDDDKSEESSQPEAGAVSQGKNFDEESNASMSTA-RDETRDGFYMEDGDPSVV 2299
Query: 1916 VL 1917
L
Sbjct: 2300 QL 2301
Score = 56 (24.8 bits), Expect = 1.2e-57, Sum P(5) = 1.2e-57
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 1899 EEKIDGS-----LDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSD 1943
EE ++GS LDK DS+ +LED G+++D G + N +D
Sbjct: 2964 EENLEGSDAEESLDKTADSS--ILEDEIAQ-GEELDSLDGGEEIENNEND 3010
Score = 55 (24.4 bits), Expect = 5.4e-56, Sum P(5) = 5.4e-56
Identities = 28/109 (25%), Positives = 46/109 (42%)
Query: 1930 CCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSS-----EKDPVSSQSVLEGSKETV---- 1980
C Q+ +VP S Q S E+K++GS EK + ++ + K+T
Sbjct: 2153 CSQTPPIVP---STPVQEEKSTEQTESKVEGSENPAAKEKSDIKEETDI-ADKDTKQDCD 2208
Query: 1981 --AEAG----DQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSS 2023
AE G + DI + + P+ + S EEK + +K +SS
Sbjct: 2209 AEAETGSVKCELKDIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESS 2257
Score = 54 (24.1 bits), Expect = 7.3e-55, Sum P(5) = 7.3e-55
Identities = 44/186 (23%), Positives = 68/186 (36%)
Query: 2210 RGDG---IVPETVPEELGLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNII 2266
RG G V P G +P +V + S + G S+ P A+ + I
Sbjct: 2135 RGTGNANTVSSLHPVGAGCSQTPPIVPSTPVQEEKSTEQTESKV-EG-SENPAAKEKSDI 2192
Query: 2267 DAEGGGNMRQTVPQDLGLPLSSSDVE-EEKIEGFSKPVGSEKESIASAVPLDESKGPDAE 2325
E + T QD + V+ E K S V + S + +E K D +
Sbjct: 2193 KEETDIADKDT-KQDCDAEAETGSVKCELKDIEMSTDVDPKSISEKGSEEDEEEKLDDDD 2251
Query: 2326 VSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAF 2385
S +++ G VS + + AS A +E + E SV Q+ + A +F
Sbjct: 2252 KSEESSQPEAGAVSQGKNFDEESNASMSTARDETRDGFYMEDGDPSVVQLLHERTFAFSF 2311
Query: 2386 EPMDVV 2391
P D V
Sbjct: 2312 WPKDRV 2317
Score = 53 (23.7 bits), Expect = 2.6e-56, Sum P(5) = 2.6e-56
Identities = 22/101 (21%), Positives = 46/101 (45%)
Query: 1280 ETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNL-A 1338
+T P P+++ E+S Q +V+G E P + E ++ E+ + + + + A
Sbjct: 2155 QTPPIVPSTPVQE--EKSTEQTESKVEGSENPAAKE---KSDIKEETDIADKDTKQDCDA 2209
Query: 1339 DLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVK 1379
+ + C + +E + D P K + + G+E D + K
Sbjct: 2210 EAETGSVKCELKD-IEMSTDVD-P--KSISEKGSEEDEEEK 2246
Score = 51 (23.0 bits), Expect = 3.9e-57, Sum P(5) = 3.9e-57
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 2344 EEADGPASFLAAEEEKN-ECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALEN 2399
E+A A ++E+N E SD E + E E E +D +DG +EN
Sbjct: 2950 EKATDKTEGTAFKDEENLEGSDAEESLDKTADSSILEDEIAQGEELDSLDGGEEIEN 3006
Score = 51 (23.0 bits), Expect = 8.6e-56, Sum P(5) = 8.6e-56
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 700 STPMQPKGRGRRIQ-SGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPS 758
S P Q + R R+I+ E+ +RR + +V + S N Q + L+ +
Sbjct: 2397 SVPRQRRRRRRKIEIEAERAAKRRNL-MEMVAQLRESQVVSE------NGQEKVVDLSKA 2449
Query: 759 GGESTATDGNVSSIPTAPVPDSVS 782
E+T++ N SS+ + + +VS
Sbjct: 2450 SREATSSTSNFSSVTSKFILPNVS 2473
Score = 50 (22.7 bits), Expect = 5.0e-57, Sum P(5) = 5.0e-57
Identities = 19/77 (24%), Positives = 31/77 (40%)
Query: 1981 AEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ 2040
A AG Q + EK + + + EE EGS+ + A E + G++
Sbjct: 2937 ALAGLQNAVGSNEEKATDKTE--GTAFKDEENLEGSDAEESLDKTADSSILEDEIAQGEE 2994
Query: 2041 MGVSLGGATVMEKSSED 2057
+ SL G +E + D
Sbjct: 2995 LD-SLDGGEEIENNEND 3010
Score = 48 (22.0 bits), Expect = 1.2e-57, Sum P(5) = 1.2e-57
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 1310 TPVSSEAPASTEAFEQEKVTNTSSFVNLADLS-SDDKTCSVTPAMETAPGFDIPIEKGVE 1368
TP + ++P +F + S + A +S S+D T S + E A +P ++
Sbjct: 2352 TPTAVDSPLQKRSFAE------LSMIGQASISGSEDITASPQLSKEDALNLSVPRQRRRR 2405
Query: 1369 QSGTEIDAK 1377
+ EI+A+
Sbjct: 2406 RRKIEIEAE 2414
Score = 48 (22.0 bits), Expect = 2.6e-56, Sum P(5) = 2.6e-56
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1250 KPENKAQAGRIENIANSSPDDK--SLPMVPN 1278
KP I+ ANS P+DK S+ + PN
Sbjct: 1859 KPTRTPFKDEIDEFANSPPEDKEESIEIHPN 1889
Score = 48 (22.0 bits), Expect = 7.3e-55, Sum P(5) = 7.3e-55
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 2144 VTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGP 2199
V + D+K AE +L GG E +E+E E + P +D+ + P
Sbjct: 1822 VGMPDAKAIAAEQRGT-DMLADGGDGGEFDREDEDPEYKPTRTPFKDEIDEFANSP 1876
Score = 45 (20.9 bits), Expect = 1.6e-56, Sum P(5) = 1.6e-56
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 1397 FKPENKTDGDSVEKLEDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSED 1446
FK E +G E+ D D S++++ I + + + G N D
Sbjct: 2961 FKDEENLEGSDAEESLDKTADSSILEDEIAQGEELDSLDGGEEIENNEND 3010
Score = 45 (20.9 bits), Expect = 8.6e-56, Sum P(5) = 8.6e-56
Identities = 23/90 (25%), Positives = 36/90 (40%)
Query: 841 GVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSN 900
G R G + G P S+++ + + + S + L L S+ G Q L N
Sbjct: 2708 GPVVREEGASRR-GRRPKSEIAKAAAAAAAVASTSGINPL-LMNSLFAGMDLTSLQNLQN 2765
Query: 901 KIQVQ-------PCGVATSADVAGPDQKPA 923
+Q P G+AT+A G + PA
Sbjct: 2766 LQSLQLAGLMGFPPGLATAAAAGGDAKNPA 2795
Score = 45 (20.9 bits), Expect = 3.0e-54, Sum P(6) = 3.0e-54
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 687 PVAPG-SQSASACPSTPMQPKGRGRRIQS---GEQVPRRRGK 724
PV G SQ+ PSTP+Q + + +S G + P + K
Sbjct: 2148 PVGAGCSQTPPIVPSTPVQEEKSTEQTESKVEGSENPAAKEK 2189
Score = 44 (20.5 bits), Expect = 2.2e-55, Sum P(5) = 2.2e-55
Identities = 23/102 (22%), Positives = 36/102 (35%)
Query: 829 QTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSM 888
Q +G + P G Q +PPI + E KS Q+E+ G +
Sbjct: 2133 QNRGTGNANTVSSLHPVGAGCSQ---TPPIVPSTPVQEEKSTEQTESKVEGSE--NPAAK 2187
Query: 889 GKQDALSQ-ELSNKIQVQPCGVATSADVAGPDQKPAEQSVRV 929
K D + ++++K Q C + K E S V
Sbjct: 2188 EKSDIKEETDIADKDTKQDCDAEAETGSVKCELKDIEMSTDV 2229
Score = 42 (19.8 bits), Expect = 3.6e-55, Sum P(5) = 3.6e-55
Identities = 13/67 (19%), Positives = 25/67 (37%)
Query: 1477 SRETPILSGSPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCD-KSEI 1535
S+ PI+ +P+ K + +P E + E CD ++E
Sbjct: 2154 SQTPPIVPSTPVQEEKSTEQTESKVEGSENPAAKEKSDIKEETDIADKDTKQDCDAEAET 2213
Query: 1536 PSMEAEV 1542
S++ E+
Sbjct: 2214 GSVKCEL 2220
Score = 42 (19.8 bits), Expect = 7.3e-55, Sum P(5) = 7.3e-55
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 716 EQVP---RRRGKKIGLVLPAASDDIP 738
E+VP +R GKK+G + D+P
Sbjct: 2647 ERVPVVNKRNGKKMGGAMAPPMKDLP 2672
Score = 41 (19.5 bits), Expect = 1.2e-57, Sum P(5) = 1.2e-57
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQ 550
YG G R ++ S Y+ Q TE++ E +C+
Sbjct: 1617 YGWG-RWTDILSHGRYKRQLTEQDVETICR 1645
Score = 41 (19.5 bits), Expect = 4.2e-56, Sum P(5) = 4.2e-56
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 1795 DNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRID 1843
D EG E EN+ D S S +L+D+ ++ E D +D
Sbjct: 2954 DKTEGTAFKDE---ENLEGSDAEESLDKTADSSILEDEIAQGEELDSLD 2999
Score = 41 (19.5 bits), Expect = 1.8e-55, Sum P(5) = 1.8e-55
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 1777 KADVVLDEHGKVQLLPGADNPEGGVIVPE 1805
+ +V+ D+ ++ L GAD+ E V +PE
Sbjct: 1750 RQEVIGDQADRI--LEGADSSEVDVWIPE 1776
Score = 40 (19.1 bits), Expect = 3.0e-54, Sum P(6) = 3.0e-54
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 754 SLNPSGGEST-ATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNL 810
SL E T A + ++ ++P +P SP G +DP + + +N E T L
Sbjct: 2535 SLTVEDAEVTKAFEEDMEALPARNIP---SP-------GQLDPDTRIPVINLEDGTRL 2582
Score = 38 (18.4 bits), Expect = 3.6e-55, Sum P(5) = 3.6e-55
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 1296 QSRNQNNPEVKGEETPVSSEAPASTEAFEQEK 1327
+S ++ P K S+ A +E F EK
Sbjct: 1581 ESDSEEKPSTKPRRPQDKSQGYARSECFRVEK 1612
Score = 37 (18.1 bits), Expect = 4.5e-55, Sum P(5) = 4.5e-55
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 1295 EQSRNQNNPEVKGEETPVSSE 1315
E R +PE K TP E
Sbjct: 1848 EFDREDEDPEYKPTRTPFKDE 1868
Score = 37 (18.1 bits), Expect = 3.8e-54, Sum P(5) = 3.8e-54
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 1945 CQPSSSLAPW-EAKIDGSSEKD 1965
CQPS L W E G +KD
Sbjct: 2081 CQPSLDLPEWWEC---GKHDKD 2099
Score = 37 (18.1 bits), Expect = 4.1e-53, Sum P(5) = 4.1e-53
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 2426 PVVNSVAVEESKGSE 2440
P+V S V+E K +E
Sbjct: 2158 PIVPSTPVQEEKSTE 2172
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 653 (234.9 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 156/401 (38%), Positives = 220/401 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYEY++ DR LS I+W Y+ IDE HR+KN+ L L +++S+RLL+T
Sbjct: 479 KFNLLLTTYEYVLK--DRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLIT 536
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F E+ + +PD I
Sbjct: 537 GTPLQNNIRELAALVDFLMPGKFEIREEINL-----------EAPDEEQEAY------IR 579
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA-----YQKLLMKRVEENLGSIGNS 196
L + L+P++LRRLK VE LP K ER++R E S Y+ +L + SI +
Sbjct: 580 SLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSG 639
Query: 197 KGRSVHNSVMELRNICNHPYL----SQLHAEEVDTLIPK-HYLPPIVRLCGKLEMLDRLL 251
S+ N V+EL+ NHPYL + +++++ + L ++ GK+ +LD+LL
Sbjct: 640 SQISLLNIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLL 699
Query: 252 PKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPF 311
+L+ HRVL FS M R+LD++ DYL+ + Y + RLDG R ID FN +SP
Sbjct: 700 SRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPD 759
Query: 312 FIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQT 371
F+FLLS RAGG+G+NL ADTVIIFD+DWNPQ DLQA ARAHRIGQK V+V R + T
Sbjct: 760 FVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDT 819
Query: 372 VEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESL 412
+EE V A K+ + I+ G D ++++ + E L
Sbjct: 820 IEEDVLERARRKMILEYAIISLGVTDKQKNSKNDKFSAEEL 860
Score = 52 (23.4 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 30/90 (33%), Positives = 40/90 (44%)
Query: 691 GSQSASACPST-PMQPKGR-GRRIQSGEQVPR-RRGKKIGLVL----PAASDDIPSPGP- 742
G +S+ A + QPK + R QSG+ P + +KI PA S+ P
Sbjct: 1206 GIKSSPAISTNGKTQPKKQTANRRQSGK--PNVKSAQKIESATRTPSPAISESRKKPSSK 1263
Query: 743 DPK--TNEQPQSESLNPSGGESTATDGNVS 770
D K T + QS S S +S DGNVS
Sbjct: 1264 DTKIETPSREQSRSQTASPVKSEKDDGNVS 1293
Score = 45 (20.9 bits), Expect = 1.3e-55, Sum P(4) = 1.3e-55
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 921 KPAEQSVRVVQSNQPINLPATHDSSSQPSGS-TPAQVPSMD 960
KP +S + ++S PA +S +PS T + PS +
Sbjct: 1233 KPNVKSAQKIESATRTPSPAISESRKKPSSKDTKIETPSRE 1273
Score = 43 (20.2 bits), Expect = 1.6e-55, Sum P(4) = 1.6e-55
Identities = 21/96 (21%), Positives = 38/96 (39%)
Query: 700 STPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDI---PSPGPDPKTNEQPQSESLN 756
S P + + +++ S + RR G+ + L + SP QP+ ++ N
Sbjct: 1169 SVPKDKENKEKKVPSAVHLVRR-GEYLLSALREHHQNFGIKSSPAISTNGKTQPKKQTAN 1227
Query: 757 --PSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQS 790
SG + + + S P P ++S S K S
Sbjct: 1228 RRQSGKPNVKSAQKIESATRTPSP-AISESRKKPSS 1262
Score = 38 (18.4 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 439 SEIDVFESVDKQRREEE 455
+E + FE D+ R EEE
Sbjct: 934 TEREKFEEEDRLREEEE 950
Score = 38 (18.4 bits), Expect = 1.6e-55, Sum P(4) = 1.6e-55
Identities = 16/92 (17%), Positives = 37/92 (40%)
Query: 1243 ASK-TEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQN 1301
+SK T+ P + + + S DD ++ + + P+ KH ++ R +
Sbjct: 1261 SSKDTKIETPSREQSRSQTASPVKSEKDDGNVSLNAEQKARCKELMYPVRKHMKRLRKDS 1320
Query: 1302 NPEVKGEETPVSSEAPASTEAFEQEKVTNTSS 1333
+ + E + +E + ++ V +T S
Sbjct: 1321 SGLGRAELVKLLTECLTTIGKHIEKTVNDTPS 1352
Score = 37 (18.1 bits), Expect = 1.3e-55, Sum P(4) = 1.3e-55
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 861 VSAGPESKSNLQSENNSG--GLRLS-KSVSMGKQDALSQELSN 900
VSA + SN QS N S L ++ K V + L Q L++
Sbjct: 1049 VSAAEKDLSNDQSNNKSSRKALLITFKGVKNINAETLVQRLND 1091
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 662 (238.1 bits), Expect = 1.7e-57, Sum P(3) = 1.7e-57
Identities = 156/388 (40%), Positives = 215/388 (55%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFNVLLTTYEY++ DR +L I+W ++ +DE HR+KNA L L ++ ++R+L+T
Sbjct: 484 KFNVLLTTYEYILK--DRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLIT 541
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F ++ FE+ + + I+
Sbjct: 542 GTPLQNNIKELAALVNFLMPGRFTIDQEID------FENQDEEQEEY-----------IH 584
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI-GNSKGR 199
LH+ ++PF+LRRLK VE LP K ER++R E S Q K + +N ++ +KG
Sbjct: 585 DLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGG 644
Query: 200 --SVHNSVMELRNICNHPYLSQLHAEEV-----D-TLIPKHYLPPIVRLCGKLEMLDRLL 251
S+ N + EL+ NHPYL E V D + ++ L ++ GK+ +LD+LL
Sbjct: 645 HFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLL 704
Query: 252 PKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPF 311
+LK HRVL FS M R+LD++ DYL+ K + RLDG R ID FN DS
Sbjct: 705 TRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSND 764
Query: 312 FIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQT 371
F+FLLS RAGG+G+NL ADTV+IFD+DWNPQ DLQA ARAHRIGQK V+V R + T
Sbjct: 765 FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDT 824
Query: 372 VEEQVRASAEHKLGVANQSITAGFFDNN 399
VEE+V A K+ + I+ G D N
Sbjct: 825 VEEEVLERARKKMILEYAIISLGVTDGN 852
Score = 45 (20.9 bits), Expect = 1.7e-57, Sum P(3) = 1.7e-57
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 531 REVRSYEEQWTEEEFEKM 548
+ V+++ WT+EE EK+
Sbjct: 1166 KPVQNWSSNWTKEEDEKL 1183
Score = 43 (20.2 bits), Expect = 2.2e-57, Sum P(4) = 2.2e-57
Identities = 16/70 (22%), Positives = 32/70 (45%)
Query: 1083 PTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQ---ETA 1139
P + R G +Q S PS GSA + + + + R + + SL+ + ++
Sbjct: 1343 PLKSKVSRDNGTRQSSNPS--SGSA-HEKEYDSMDEEDCRHTMSAIRTSLKRLRRGGKSL 1399
Query: 1140 DVNDVARVMK 1149
D + A+++K
Sbjct: 1400 DRKEWAKILK 1409
Score = 42 (19.8 bits), Expect = 2.2e-57, Sum P(4) = 2.2e-57
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1019 ALDSITEPYTGSTNTEGISNTIHHVPGAV 1047
A S T P T S +GI+ + VPGA+
Sbjct: 1224 ASSSDTTP-TPSKKGKGITGSSKKVPGAI 1251
Score = 40 (19.1 bits), Expect = 4.4e-57, Sum P(3) = 4.4e-57
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 1947 PSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMD 1988
PSS A E + D E+D + S + S + + G +D
Sbjct: 1360 PSSGSAH-EKEYDSMDEEDCRHTMSAIRTSLKRLRRGGKSLD 1400
Score = 39 (18.8 bits), Expect = 5.7e-57, Sum P(4) = 5.7e-57
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 2370 SSVSQIESKEP-EAKAFEPMDVVD-GAVAL-ENTSEGMGGPSPPL 2411
S +I S EP + M + G AL NT P+PPL
Sbjct: 1300 SMTPEITSSEPANGPPSKRMKALPKGPAALINNTRLSPNSPTPPL 1344
Score = 38 (18.4 bits), Expect = 4.4e-57, Sum P(3) = 4.4e-57
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 1383 TPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSLVK 1422
TP GE+ + G E K TD + +D + + L K
Sbjct: 904 TPDLGESHLGGEEFLKQFEVTDYKADIDWDDIIPEEELKK 943
Score = 37 (18.1 bits), Expect = 1.7e-57, Sum P(3) = 1.7e-57
Identities = 14/49 (28%), Positives = 19/49 (38%)
Query: 631 PAPSGTVKVEKDAMTGQSTS-ASASLPXXXXXXXXXXXAQHVMVGIAPS 678
P P KV +D T QS++ +S S +H M I S
Sbjct: 1340 PTPPLKSKVSRDNGTRQSSNPSSGSAHEKEYDSMDEEDCRHTMSAIRTS 1388
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 657 (236.3 bits), Expect = 1.9e-57, Sum P(5) = 1.9e-57
Identities = 158/410 (38%), Positives = 223/410 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 1076 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 1133
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1134 GTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF-------GDLKTEEQ----------VQ 1176
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 1177 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQA 1236
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ + P L +++ GKL ++D
Sbjct: 1237 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLID 1296
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1297 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1356
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1357 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1416
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
+ E ++ A KLG+ QS++ N + ++ +E LLR+
Sbjct: 1417 RNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRK 1466
Score = 63 (27.2 bits), Expect = 1.9e-57, Sum P(5) = 1.9e-57
Identities = 37/182 (20%), Positives = 64/182 (35%)
Query: 2210 RGDGIVPETVPEELGLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAE 2269
RG G P +G +P V+ + + E+ + + E
Sbjct: 2135 RGAGNTSSLNPLAVGFVQTPPVISSAHIQDERVLEQAEGKVEEPENPAAKEKCEGKEEEE 2194
Query: 2270 GGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQ 2329
+ Q+ SS E + +E GS+ S + +E K D + S +
Sbjct: 2195 ETDGSGKESKQECEAEASSVKNELKGVE-VGADTGSKSISEKGSEEDEEEKLEDDDKSEE 2253
Query: 2330 TAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMD 2389
++ G VS + + AS A +E + E SV+Q+ + A +F P D
Sbjct: 2254 SSQPEAGAVSRGKNFDEESNASMSTARDETRDGFYMEDGDPSVAQLLHERTFAFSFWPKD 2313
Query: 2390 VV 2391
V
Sbjct: 2314 RV 2315
Score = 63 (27.2 bits), Expect = 1.6e-56, Sum P(5) = 1.6e-56
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 2010 EEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSED 2057
EE+T+GS K+ A+ ++ ++ G ++G G ++ EK SE+
Sbjct: 2193 EEETDGSGKESKQECEAEASSVKNELK-GVEVGADTGSKSISEKGSEE 2239
Score = 58 (25.5 bits), Expect = 1.9e-57, Sum P(5) = 1.9e-57
Identities = 21/81 (25%), Positives = 34/81 (41%)
Query: 2144 VTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEP 2203
V + D+K AE +L GG E +E+E E + P +D+ + P +
Sbjct: 1821 VGMPDAKAIAAEQRGT-DMLADGGDGGEFDREDEDPEYKPTRTPFKDEIDEFANSPSEDK 1879
Query: 2204 CVQMDVRGDGIVPETVPEELG 2224
M++ G E+ ELG
Sbjct: 1880 EESMEIHATGKHSES-NAELG 1899
Score = 56 (24.8 bits), Expect = 2.9e-54, Sum P(6) = 2.9e-54
Identities = 17/69 (24%), Positives = 29/69 (42%)
Query: 1459 KSTEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDVGNHPQNVEPTSASPE 1518
+ T+G K + A+ S L G + + T ++S K + + +E S E
Sbjct: 2194 EETDGSGKESKQECEAEASSVKNELKGVEVGADTGSKSISEKGSEEDEEEKLEDDDKSEE 2253
Query: 1519 RSGPQNSAV 1527
S P+ AV
Sbjct: 2254 SSQPEAGAV 2262
Score = 52 (23.4 bits), Expect = 4.6e-54, Sum P(6) = 4.6e-54
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 1883 EKSEELGLPSLSSATKE-EKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPENL 1941
+K+E G P T E + SLDK +S+L LED G+++D G + N
Sbjct: 2940 DKAE--GGPFKDGETLEGSDAEESLDKTAESSL--LEDEIAQ-GEELDSLDGGDEIENNE 2994
Query: 1942 SD 1943
+D
Sbjct: 2995 ND 2996
Score = 50 (22.7 bits), Expect = 7.1e-55, Sum P(5) = 7.1e-55
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 700 STPMQPKGRGRRIQ-SGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPS 758
S P Q + R R+I+ E+ +RR + +V + S N Q + L+ +
Sbjct: 2395 SVPRQRRRRRRKIEIEAERAAKRRNL-MEMVAQLRESQVVSE------NGQEKVVDLSKA 2447
Query: 759 GGESTATDGNVSSIPTAPVPDSVS 782
E+T++ N SS+ + + +VS
Sbjct: 2448 SREATSSTSNFSSLSSKFILPNVS 2471
Score = 49 (22.3 bits), Expect = 1.6e-56, Sum P(5) = 1.6e-56
Identities = 45/191 (23%), Positives = 71/191 (37%)
Query: 2224 GLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLG 2283
GL ++P+ S +GE KG + E N D+E + T D
Sbjct: 2814 GLLNNPLSAATGNTTTASSQGEPEDSTSKGEEKGNENEDENK-DSE-----KST---DA- 2863
Query: 2284 LPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIP-V 2342
+S++D + + P G +A L + P S G G +++P
Sbjct: 2864 --VSAADSANGSVGAATAPAGLPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGF 2921
Query: 2343 P-----EEADGPASFLAAEE-EKNECSDKEPV-GSSVSQ-----IESK--EPEAKAFEPM 2388
P + A G + AA++ E D E + GS + ES E E E +
Sbjct: 2922 PALAGLQNAVGSSEEKAADKAEGGPFKDGETLEGSDAEESLDKTAESSLLEDEIAQGEEL 2981
Query: 2389 DVVDGAVALEN 2399
D +DG +EN
Sbjct: 2982 DSLDGGDEIEN 2992
Score = 49 (22.3 bits), Expect = 9.3e-54, Sum P(6) = 9.3e-54
Identities = 20/68 (29%), Positives = 27/68 (39%)
Query: 2000 LDIPASLATPEEKTEGSEKDP-DSSFAAQEDPKESVVEAGD-QMGVSLGGATVMEKSSED 2057
L+ P S AT T S+ +P DS+ +E E+ E D + A S
Sbjct: 2816 LNNPLSAATGNTTTASSQGEPEDSTSKGEEKGNENEDENKDSEKSTDAVSAADSANGSVG 2875
Query: 2058 LATPPLSL 2065
AT P L
Sbjct: 2876 AATAPAGL 2883
Score = 48 (22.0 bits), Expect = 1.4e-54, Sum P(5) = 1.4e-54
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 1310 TPVSSEAPASTEAFEQEKVTNTSSFVNLADLS-SDDKTCSVTPAMETAPGFDIPIEKGVE 1368
TP + ++P +F + S V A +S S+D T S + E A +P ++
Sbjct: 2350 TPTTVDSPLQKRSFAE------LSMVGQASISGSEDITTSPQLSKEDALNLSVPRQRRRR 2403
Query: 1369 QSGTEIDAK 1377
+ EI+A+
Sbjct: 2404 RRKIEIEAE 2412
Score = 47 (21.6 bits), Expect = 1.9e-57, Sum P(5) = 1.9e-57
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 1777 KADVVLDEHGKVQLLPGADNPEGGVIVPE 1805
+ +V+ D+ K+ L GAD+ E V +PE
Sbjct: 1749 RQEVIGDQADKI--LEGADSSEADVWIPE 1775
Score = 47 (21.6 bits), Expect = 1.5e-53, Sum P(6) = 1.5e-53
Identities = 45/176 (25%), Positives = 69/176 (39%)
Query: 1889 GLPSLSSATKEEKIDGSLDKDPDS----NLVVLEDS-KGSIGDQMDCCQSGVVVPENLSD 1943
G P S++ EEK + + D++ DS + V DS GS+G +G+ P N
Sbjct: 2834 GEPEDSTSKGEEKGNENEDENKDSEKSTDAVSAADSANGSVGAAT--APAGL--PSNPLA 2889
Query: 1944 FCQPS--SSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLD 2001
F P S++AP S P L G A AG Q + EK + +
Sbjct: 2890 F-NPFLLSTMAP--GLFYPSMFLPPGLGGLTLPGFP---ALAGLQNAVGSSEEKAADKAE 2943
Query: 2002 IPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSED 2057
E EGS+ + A+ E + G+++ SL G +E + D
Sbjct: 2944 --GGPFKDGETLEGSDAEESLDKTAESSLLEDEIAQGEELD-SLDGGDEIENNEND 2996
Score = 44 (20.5 bits), Expect = 7.1e-55, Sum P(5) = 7.1e-55
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 846 RRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQ 905
RRG+R P S+++ + + + S + L L S+ G Q L N +Q
Sbjct: 2716 RRGRR------PKSEIARAAAAAAAVASTSGINPL-LVNSLFAGMDLTSLQNLQNLQSLQ 2768
Query: 906 -------PCGVATSADVAGPDQKPA 923
P G+AT+A G + PA
Sbjct: 2769 LAGLMGFPPGLATAATAGGDAKNPA 2793
Score = 44 (20.5 bits), Expect = 2.9e-54, Sum P(5) = 2.9e-54
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 754 SLNPSGGEST-ATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNL 810
SL+ E T A + ++ + PT +P SP G +DP + + +N E T L
Sbjct: 2533 SLSAEDAEVTKAFEEDIETPPTRNIP---SP-------GQLDPDTRIPVINLEDGTRL 2580
Score = 43 (20.2 bits), Expect = 1.4e-54, Sum P(5) = 1.4e-54
Identities = 17/68 (25%), Positives = 31/68 (45%)
Query: 1992 MPEKLPEHLDIP-ASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATV 2050
MP +P++ D+ +S P++K ++P+ +E V + G +GGA
Sbjct: 2605 MPSYVPKNADVLFSSFQKPKQKRHRC-RNPNKLDINTLTGEERVPVVNKRNGKKMGGA-- 2661
Query: 2051 MEKSSEDL 2058
M +DL
Sbjct: 2662 MAPPMKDL 2669
Score = 42 (19.8 bits), Expect = 2.3e-54, Sum P(5) = 2.3e-54
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 1946 QPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMD----ISIMPEKLPEHLD 2001
+P + A + K +G E++ S E +E AEA + + + + + +
Sbjct: 2177 EPENPAA--KEKCEGKEEEEETDG-SGKESKQECEAEASSVKNELKGVEVGADTGSKSIS 2233
Query: 2002 IPASLATPEEKTEGSEKDPDSS 2023
S EEK E +K +SS
Sbjct: 2234 EKGSEEDEEEKLEDDDKSEESS 2255
Score = 42 (19.8 bits), Expect = 4.7e-54, Sum P(5) = 4.7e-54
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 716 EQVP---RRRGKKIGLVLPAASDDIP 738
E+VP +R GKK+G + D+P
Sbjct: 2645 ERVPVVNKRNGKKMGGAMAPPMKDLP 2670
Score = 41 (19.5 bits), Expect = 1.9e-57, Sum P(5) = 1.9e-57
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQ 550
YG G R ++ S Y+ Q TE++ E +C+
Sbjct: 1616 YGWG-RWTDILSHGRYKRQLTEQDVETICR 1644
Score = 40 (19.1 bits), Expect = 3.7e-54, Sum P(5) = 3.7e-54
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 2147 EDSKGFEAEACDQLHVLRGGGVVAETVQEE--EKTELSCEKQPI-GSSVDDESKGPE 2200
E + EAEA + L+G V A+T + EK E++ + +ES PE
Sbjct: 2202 ESKQECEAEASSVKNELKGVEVGADTGSKSISEKGSEEDEEEKLEDDDKSEESSQPE 2258
Score = 40 (19.1 bits), Expect = 7.3e-54, Sum P(6) = 7.3e-54
Identities = 13/57 (22%), Positives = 19/57 (33%)
Query: 1159 KAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVTPTVETPPPGFNSPN 1215
K + G EG D E A+ + ++ PT P PG P+
Sbjct: 2510 KRRRGRRKNVEGLDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPD 2566
Score = 38 (18.4 bits), Expect = 2.9e-54, Sum P(6) = 2.9e-54
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 1295 EQSRNQNNPEVKGEETPVSSEAPASTEAFEQEK 1327
E R +PE K TP E + ++K
Sbjct: 1847 EFDREDEDPEYKPTRTPFKDEIDEFANSPSEDK 1879
Score = 38 (18.4 bits), Expect = 4.6e-54, Sum P(6) = 4.6e-54
Identities = 26/91 (28%), Positives = 34/91 (37%)
Query: 1517 PERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDAIVNNLLETPL----DIKSIGG--PIVS 1570
P G S G KSEI A A S + +N LL L D+ S+ + S
Sbjct: 2707 PVVRGEGASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQNLQS 2766
Query: 1571 MKAADVADADHPLETAVELGSPV-NSCTVEP 1600
++ A + L TA G N V P
Sbjct: 2767 LQLAGLMGFPPGLATAATAGGDAKNPAAVLP 2797
Score = 38 (18.4 bits), Expect = 9.6e-54, Sum P(5) = 9.6e-54
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 1562 KSIGGPIVSMKAADVADADHPLETAVE 1588
K+ GGP + + +DA+ L+ E
Sbjct: 2941 KAEGGPFKDGETLEGSDAEESLDKTAE 2967
Score = 38 (18.4 bits), Expect = 2.0e-52, Sum P(6) = 2.0e-52
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 1400 ENKTDGDSVEKLEDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLE 1453
E +TDG E ++ + S VK + +D ++ SE+ + LE
Sbjct: 2193 EEETDGSGKESKQECEAEASSVKNELKGVEVGADTGSKSISEKGSEEDEEEKLE 2246
Score = 37 (18.1 bits), Expect = 7.2e-55, Sum P(3) = 7.2e-55
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKN 2360
G A+ + A V IP P A+ PA + E +K+
Sbjct: 1754 GDQADKILEGADSSEADVWIPEPFHAEVPADWWDKEADKS 1793
Score = 37 (18.1 bits), Expect = 1.9e-53, Sum P(6) = 1.9e-53
Identities = 21/94 (22%), Positives = 39/94 (41%)
Query: 474 PPLPSRLVTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHY-GRGKRARE 532
PP+ S D+ + L +A + P+ N K K E G + + G GK +++
Sbjct: 2154 PPVISSAHIQDE-RVLEQAEGKVEEPE-----NPAAKEKCE--GKEEEEETDGSGKESKQ 2205
Query: 533 VRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
E + E + + + S + E+G E+
Sbjct: 2206 ECEAEASSVKNELKGVEVGADTGSKSISEKGSEE 2239
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 643 (231.4 bits), Expect = 1.9e-57, Sum P(2) = 1.9e-57
Identities = 155/408 (37%), Positives = 226/408 (55%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++ +K V KF+VLLT+YE + D+ L I+W +++DE HR+KN K L
Sbjct: 740 VFRMKKEVQIKFHVLLTSYELITI--DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 797
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
Y+ ++LLLTGTP FN+ E F + F D S +
Sbjct: 798 YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ-- 848
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVE 187
I +LH +L P +LRRLK V +P K E +VR E S Y K ++ R
Sbjct: 849 --------IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 900
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEM 246
E L S G S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +
Sbjct: 901 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 960
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN
Sbjct: 961 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1020
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
+ F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF
Sbjct: 1021 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1080
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
T +VEE++ A+ K+ + + + G + S ++ L+ +L+
Sbjct: 1081 VTRASVEERITQVAKRKMMLTHLVVRPGL--GSKSGSMTKQELDDILK 1126
Score = 59 (25.8 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 23/91 (25%), Positives = 43/91 (47%)
Query: 1958 IDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPAS--------LATP 2009
+DG +D S E ++E E ++ S PE+LP+ +P L+
Sbjct: 1527 LDGVEGEDKHESSDGKERAREERLEEAEKAQPS--PEQLPKEEVLPEKEKILDKLELSLI 1584
Query: 2010 EEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ 2040
+ +GS+ PD + A +++P E+ + GD+
Sbjct: 1585 HSRGDGSDFRPDDTKAEEKEPIETQ-QNGDK 1614
Score = 52 (23.4 bits), Expect = 1.7e-54, Sum P(5) = 1.7e-54
Identities = 37/165 (22%), Positives = 68/165 (41%)
Query: 1192 SSDDKT-CSVTPTVETP-PPGFNSPNENPGELTGT-KNDASVRGDHTP-----VSGHTLA 1243
SSD T +P P PPG P++ +L + + V+ P + G
Sbjct: 1476 SSDPNTPVPASPAHLLPAPPGL--PDKLEAQLGYMDEKEPGVQKPKKPPEIQALDGVEGE 1533
Query: 1244 SKTEALKPENKAQAGRIENIANSSPDDKSLP---MVPNLETAPPGFDIPIEKHNEQSRNQ 1300
K E+ + +A+ R+E + P + LP ++P E ++ + H+ +
Sbjct: 1534 DKHESSDGKERAREERLEEAEKAQPSPEQLPKEEVLPEKEKILDKLELSLI-HSRGDGSD 1592
Query: 1301 NNPE-VKGEET-PVSSEAPASTEAFEQEKVTNTSS---FV-NLAD 1339
P+ K EE P+ ++ E E+ K + + F+ N+AD
Sbjct: 1593 FRPDDTKAEEKEPIETQQNGDKEEDEEGKKEDRNGKFKFMFNIAD 1637
Score = 51 (23.0 bits), Expect = 1.9e-57, Sum P(2) = 1.9e-57
Identities = 29/97 (29%), Positives = 40/97 (41%)
Query: 472 PLPPLPSRLV-TDDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRA 530
P+P P+ L+ L EA Y K P V +K + ALD G+
Sbjct: 1482 PVPASPAHLLPAPPGLPDKLEAQLGYMDEK---EPGVQKPKKPPEIQALDGVE---GEDK 1535
Query: 531 REVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGL-EK 566
E +E+ EE E+ +A+ S KEE L EK
Sbjct: 1536 HESSDGKERAREERLEEAEKAQPSPEQLPKEEVLPEK 1572
Score = 45 (20.9 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 747 NEQPQSESLNPSGGESTATDGNVSSIPTAPVPDS 780
N + + L P G E +SS P PVP S
Sbjct: 1453 NGKYSTPDLIPEGPEGKKPGEVISSDPNTPVPAS 1486
Score = 45 (20.9 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 28/126 (22%), Positives = 49/126 (38%)
Query: 445 ESVDKQRREEEMATWRKLIRGLGTDGE-PLPPLPSRLVTDDDLKALYEAMK---IYDAPK 500
E D + R E + R+ R L +D + PLPPL +R+ + ++ + + +
Sbjct: 1311 EDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMR 1370
Query: 501 TGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLK 560
G+ P H D RGK +E R+Y + E + + +
Sbjct: 1371 WGMPPQDAFN---SHWLVRDL----RGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVP 1423
Query: 561 EEGLEK 566
EGL +
Sbjct: 1424 REGLSR 1429
Score = 42 (19.8 bits), Expect = 3.2e-55, Sum P(5) = 3.2e-55
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 522 QHYGRGKRAREVRSY------EEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
++ G+GKR R+ +Y +++W +E + Q+E S + ++E E+
Sbjct: 1269 RNLGKGKRIRKQVNYNDASQEDQEWQDELSDN--QSEYSIGSEDEDEDFEE 1317
Score = 40 (19.1 bits), Expect = 1.5e-52, Sum P(5) = 1.5e-52
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSE-KDPDSSFAAQEDPKESV 2034
+S++ +K+ E + +TP+ EG E K P ++ DP V
Sbjct: 1439 MSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPGEVISS--DPNTPV 1483
Score = 39 (18.8 bits), Expect = 1.2e-56, Sum P(3) = 1.2e-56
Identities = 16/65 (24%), Positives = 26/65 (40%)
Query: 1357 PGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGE-AIVAGIEVFKPENKTDGDSVEKLEDTV 1415
P IP + + AK K +TP PG+ V V ++ +++ +D
Sbjct: 1147 PATPIPDVQSSKGGALAASAKKKHGSTP-PGDNKDVEDSSVIHYDDAAISKLLDRNQDAT 1205
Query: 1416 DDHSL 1420
DD L
Sbjct: 1206 DDTEL 1210
Score = 38 (18.4 bits), Expect = 4.7e-53, Sum P(5) = 4.7e-53
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 2171 ETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDG 2213
E ++E EK + S E+ P + ++ K + + RGDG
Sbjct: 1548 ERLEEAEKAQPSPEQLPKEEVLPEKEKILDKLELSLIHSRGDG 1590
Score = 37 (18.1 bits), Expect = 3.2e-55, Sum P(5) = 3.2e-55
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 704 QPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDI 737
+P+G+ R QS Q+ R K + +L +I
Sbjct: 1318 RPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNI 1351
Score = 37 (18.1 bits), Expect = 2.4e-54, Sum P(3) = 2.4e-54
Identities = 8/45 (17%), Positives = 23/45 (51%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E +D + + E+++E ++ P G S + ++ ++ +P+
Sbjct: 1296 ELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPL 1340
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 645 (232.1 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 151/378 (39%), Positives = 212/378 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
+F ++TT+E ++ +L+ I+W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 494 RFQAIITTFEMILGGCG--ELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLT 551
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 552 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF-------GDLKTEEQ----------VQ 594
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE +L K E ++ E + QK + + E+N + G++
Sbjct: 595 KLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQT 654
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTLIPK---HYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL + E++ DT P +L +++ GKL ++D
Sbjct: 655 NVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLID 714
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPK+KA H+VL FS M R LD++EDYL K+Y Y R+DG G R A ID+F++ D
Sbjct: 715 KLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPD 774
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 775 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVT 834
Query: 369 VQTVEEQVRASAEHKLGV 386
+ E ++ A KLG+
Sbjct: 835 RNSYEREMFDRASLKLGL 852
Score = 38 (18.4 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 1766 SSSKDIIAESAKADVVLDEHGKVQ 1789
S++KD +AE ++A+ DE K++
Sbjct: 984 SATKDELAELSEAESEGDEKPKLR 1007
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 687 (246.9 bits), Expect = 2.1e-57, Sum P(5) = 2.1e-57
Identities = 168/412 (40%), Positives = 233/412 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 919 KFDALITTFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 976
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S +F + F GD + +
Sbjct: 977 GTPLQNTVEELFSLLHFLEPSQFPSESEFLKDF-------GDLKTEEQ----------VQ 1019
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 1020 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHT 1079
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEE-VDT-------LIPKHY-LPPIVRLCGKLEML 247
+ N++MELR CNHPYL AEE + T +IP + L +VR GKL ++
Sbjct: 1080 NMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLI 1139
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
D+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++
Sbjct: 1140 DKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKP 1199
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 1200 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLI 1259
Query: 368 TVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAED-RREYLESLLRE 415
T + E ++ A KLG+ QS++ G N T + ++ +E LLR+
Sbjct: 1260 TRNSYEREMFDKASLKLGLDKAVLQSMS-GRDGNITGIQQFSKKEIEDLLRK 1310
Score = 56 (24.8 bits), Expect = 2.1e-57, Sum P(5) = 2.1e-57
Identities = 25/125 (20%), Positives = 56/125 (44%)
Query: 1245 KTEALKPENKAQAGRIEN--IANS--SPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQ 1300
+T A P ++ ++E+ +A S +P D + + P+ T ++P K ++ +
Sbjct: 2014 ETAAQVPSLESLTLKLEHEVVARSRPTPQDYEMRVAPSDTTPLVSRNVPPVKLEDEDDSD 2073
Query: 1301 NNPEVK-----GEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMET 1355
+ ++ + SS + +ST+ E EK S+ + + L ++ S+T + +
Sbjct: 2074 SELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLSADRSRSKLYDEESLLSLTMSQDG 2133
Query: 1356 APGFD 1360
P D
Sbjct: 2134 FPNED 2138
Score = 53 (23.7 bits), Expect = 1.4e-56, Sum P(6) = 1.4e-56
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 1416 DDHSLVKELIHRSPDH-SDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVA 1474
DD ++ E HR D+ SD+V G ED PL+ P + EG + M ++++
Sbjct: 1667 DDKAIAAE--HRVLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEIS 1724
Score = 50 (22.7 bits), Expect = 5.3e-57, Sum P(5) = 5.3e-57
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSEN 975
P +KP E++ V S + + L H+ ++ S TP ++ SDT ++S N
Sbjct: 2007 PVEKPPEETAAQVPSLESLTLKLEHEVVAR-SRPTPQDY---EMRVAPSDTTPLVSRN 2060
Score = 43 (20.2 bits), Expect = 1.4e-56, Sum P(6) = 1.4e-56
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 1990 SIMPEKLPEHLDIPASL----ATPEEKTEGSEKDPDSSFAAQEDPKESVVEA 2037
++ P KL + D + L +P + S SS ED KE + A
Sbjct: 2060 NVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLSA 2111
Score = 42 (19.8 bits), Expect = 2.1e-57, Sum P(5) = 2.1e-57
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R R++ S ++ + TE + E +C+A
Sbjct: 1457 YGWG-RWRDILSHGRFKRRMTERDVETICRA 1486
Score = 40 (19.1 bits), Expect = 5.3e-57, Sum P(5) = 5.3e-57
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 1218 PGEL---TGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQ---AG--RIENIANSSPD 1269
PG + +G K +R D + + T +L N Q +G + ++ +SS
Sbjct: 2411 PGPIATDSGKKRARRMRPDLSKMMALMQGGGTGSLSLHNTFQHSSSGLQSVSSLGHSSAT 2470
Query: 1270 DKSLPMVP 1277
SLP VP
Sbjct: 2471 SASLPFVP 2478
Score = 40 (19.1 bits), Expect = 5.7e-56, Sum P(5) = 5.7e-56
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 732 AASDDIPSPG---PDPKTNEQPQSES------LNPSGGESTATDGNVSSIPTAPVPDSVS 782
A SD P P K ++ S+S L+PS S+++ + SS +
Sbjct: 2049 APSDTTPLVSRNVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDEKEEK 2108
Query: 783 PSAVKGQSGTIDPSSAVAALNSE 805
SA + +S D S ++ S+
Sbjct: 2109 LSADRSRSKLYDEESLLSLTMSQ 2131
Score = 38 (18.4 bits), Expect = 2.1e-57, Sum P(5) = 2.1e-57
Identities = 12/52 (23%), Positives = 26/52 (50%)
Query: 1714 GDKKADCKMEPDCLVASDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALL 1765
G++K ++E C+ + ++++L R + + DG + + E P A L
Sbjct: 2292 GNRKKLVELEVQCMEEPNHLDVDLETRIPVINKVDGTLLVG--EDAPRRAEL 2341
Score = 38 (18.4 bits), Expect = 7.3e-57, Sum P(4) = 7.3e-57
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 646 GQSTSASASLPXXXXXXXXXXXAQHV 671
G S++ SASLP + HV
Sbjct: 2465 GHSSATSASLPFVPFVMGGAASSPHV 2490
Score = 38 (18.4 bits), Expect = 1.4e-56, Sum P(6) = 1.4e-56
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEE 2357
GP + ++ G PVP A+ +A EE
Sbjct: 2196 GPGNHLLDSPSLTPGEYGDSPVPTPRSSSAASMAEEE 2232
Score = 37 (18.1 bits), Expect = 2.1e-57, Sum P(5) = 2.1e-57
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 2400 TSEGMGGPSPPLVIAEDKTENEIEED 2425
T+ G PPL ED+ + + ++D
Sbjct: 2527 TTSGTALRLPPLQPEEDEDDEDEDDD 2552
Score = 37 (18.1 bits), Expect = 5.6e-56, Sum P(6) = 5.6e-56
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 2061 PPLSLANEEEMIEGFDNDPTGISMAVMDSKECAAEAADQMCVSEGCVVVTEKLSED 2116
PP+ L +E++ D S + S ++ + D+ SE EKLS D
Sbjct: 2062 PPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDE---SED--EKEEKLSAD 2112
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 655 (235.6 bits), Expect = 3.8e-57, Sum P(3) = 3.8e-57
Identities = 158/412 (38%), Positives = 228/412 (55%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
Y+ ++ +K N + Y D+ L I+W ++ +DE HR+KN+ L+ LK Y
Sbjct: 851 YTTNRLGKKKLNFNVLLTTYDFILKDKNTLGTIKWEFLAVDEAHRLKNSESVLHEVLKLY 910
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+++RLL+TGTP F S +DF ++ E++
Sbjct: 911 NTTNRLLVTGTPLQNSLKELWNLLNFLMPNKFTSLKDFQDQYSDLKENDQ---------- 960
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLG 191
I +LH VL+P +LRR+K VE LP K ER++R + S QK K + +N
Sbjct: 961 -------IAQLHSVLKPHLLRRIKKDVEKSLPPKTERILRVDLSNVQKKYYKWILTKNFQ 1013
Query: 192 SIGNSKGR--SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDR 249
+ KG ++ N + EL+ CNHPYL Q +E + L K L ++R GKL +LD+
Sbjct: 1014 ELNKGKGEKTTLLNIMTELKKTCNHPYLYQNARDECE-LGAKDLLDSMIRASGKLVLLDK 1072
Query: 250 LLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDS 309
LL +LK T HRVL FS M R+LD++ DYL + +++ RLDG S R +D+FN DS
Sbjct: 1073 LLIRLKETGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMSREKRSQAMDRFNAVDS 1132
Query: 310 PFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETV 369
P F FLLS +AGG+G+NL ADTVIIFD+DWNPQ DLQA+ARAHRIGQK V + R +
Sbjct: 1133 PDFCFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHVNIYRLVSK 1192
Query: 370 QTVEEQVRASAEHKLGVAN-------QSITAGFFDNNTSAEDRREYLESLLR 414
+VEE + A+ K+ + + +S TA N S +E LE++L+
Sbjct: 1193 SSVEEDILERAKQKMVLDHLVIQTMEKSQTAKSNTPNNSNVFNKEELEAILK 1244
Score = 49 (22.3 bits), Expect = 3.8e-57, Sum P(3) = 3.8e-57
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 834 SRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKS-NLQSENNSGGLRLSK 884
S+ T SGG + + S +D S+ S+S N S NNS SK
Sbjct: 1854 SKYTASGGKELKSLYDKMKKSSSSNNDSSSSSSSRSSNSSSSNNSNSSSSSK 1905
Score = 45 (20.9 bits), Expect = 1.6e-56, Sum P(3) = 1.6e-56
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 835 RKTQSG--GVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNS 877
+KT G V P + G+R S + + SKS+ S+++S
Sbjct: 1685 KKTSFGRLSVPPNKMGERSPSKSTTTTTTTTTSSSKSSRNSKHHS 1729
Score = 44 (20.5 bits), Expect = 3.8e-57, Sum P(3) = 3.8e-57
Identities = 24/103 (23%), Positives = 44/103 (42%)
Query: 397 DNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXRSESEIDVFESVDKQRREEEM 456
++ + ED + Y ++LLR+C++ S+S++ + REE++
Sbjct: 1767 NHESDEEDDKYYDKNLLRKCQQ---YLSPIKELLENFRSLSDSKVQI-------SREEKV 1816
Query: 457 ATWRKLIRGLGTD-GEPLPPLPSRLVTDDDLKALYEAMKIYDA 498
+ +K + LG + L S + D D Y A K Y A
Sbjct: 1817 SKTKKYLLSLGKEISIILDEKKSANIKDLDSHLWYSASK-YTA 1858
Score = 42 (19.8 bits), Expect = 6.2e-57, Sum P(3) = 6.2e-57
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 537 EEQWTEEEFEKMCQAESSDSPKLKEEGLEKSL 568
+E + EEE +K + ++K E L+K +
Sbjct: 1650 DEDYMEEEEKKEKTKNTRTKKRIKSEELQKEI 1681
Score = 42 (19.8 bits), Expect = 3.3e-56, Sum P(3) = 3.3e-56
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 833 QSRKTQSGGVT-PRRRGKRQALGSPPISDVSAGPESKSNLQSENNSG 878
Q+++ + G P++RG++ S I +VS + + ENN+G
Sbjct: 1570 QTKEKEEGEFKIPKKRGRK----SKEIKEVSNNNHNNKETK-ENNNG 1611
Score = 42 (19.8 bits), Expect = 3.3e-56, Sum P(3) = 3.3e-56
Identities = 19/83 (22%), Positives = 31/83 (37%)
Query: 1071 VSVPVKRHGRKTP-------TTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQ---HSQNK 1120
+SVP + G ++P TT + + S D D N + +
Sbjct: 1692 LSVPPNKMGERSPSKSTTTTTTTTTSSSKSSRNSKHHSDDDDDDYRDKDSNSGRGRGRGR 1751
Query: 1121 SRDSFGSKTISLRSKQETADVND 1143
S +S S + S R+K +D D
Sbjct: 1752 SSNSSSSSSSSSRNKNHESDEED 1774
Score = 40 (19.1 bits), Expect = 5.4e-56, Sum P(3) = 5.4e-56
Identities = 17/91 (18%), Positives = 37/91 (40%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLG-G 2047
+S+ P K+ E ++ T T S+ +S + +D + + G G G
Sbjct: 1692 LSVPPNKMGERSPSKSTTTTTTTTTSSSKSSRNSKHHSDDDD-DDYRDKDSNSGRGRGRG 1750
Query: 2048 ATVMEKSSEDLATPPLSLANEEEMIEGFDND 2078
+ SS ++ + ++EE + +D +
Sbjct: 1751 RSSNSSSSSSSSSRNKNHESDEEDDKYYDKN 1781
Score = 38 (18.4 bits), Expect = 8.7e-56, Sum P(3) = 8.7e-56
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPS 2408
EEEK E K + +I+S+E + + P G +++ G PS
Sbjct: 1656 EEEKKE---KTKNTRTKKRIKSEELQKEILSPKKTSFGRLSVPPNKMGERSPS 1705
Score = 37 (18.1 bits), Expect = 2.1e-56, Sum P(3) = 2.1e-56
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 543 EEFEKMCQAESSDSPKLKEEGLEKSLP 569
++ K +SS K KEEG E +P
Sbjct: 1557 KDISKTTNKKSSKQTKEKEEG-EFKIP 1582
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 624 (224.7 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 177/555 (31%), Positives = 274/555 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +I+DE HR+KN K L Y H+LLLT
Sbjct: 866 KFHVLLTSYELITI--DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT 923
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ E F + F D + + I
Sbjct: 924 GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----------IK 966
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 967 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGN 1026
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL + A E + Y ++R GKL +L ++L LK
Sbjct: 1027 QVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKE 1086
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1087 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1146
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1147 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI 1206
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXXXR 436
A+ K+ + + + G + T + ++E L+ +L+ EE
Sbjct: 1207 TQVAKKKMMLTHLVVRPGL-GSKTGSMSKQE-LDDILK-FGTEELFKDEATDGGGDNKEG 1263
Query: 437 SESEIDVFE--SVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMK 494
+S + ++ ++++ + T ++G+ + +V ++++ E +
Sbjct: 1264 EDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFK-VAQYVVREEEMGEEEEVER 1322
Query: 495 IYDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSYEEQWTEEEFEKMCQA 551
+ V P+ K H ++ G+GKR R+ +Y + E+ + Q+
Sbjct: 1323 EIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQS 1382
Query: 552 ES-SDSPKLKEEGLE 565
++ SD EEG E
Sbjct: 1383 DNQSDYSVASEEGDE 1397
Score = 69 (29.3 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 2300 SKPVGSEKESIASAVPLDES-KGPDAEVSSQTAIEGGGVV-SIPVPEEA----DGPASFL 2353
S P ++ + A A P ++ K + + + + E V S+P PE A PA
Sbjct: 1566 STPGDTQPNTPAPAPPAEDGIKVEENNLKEEESAEAEKEVKSVP-PEAAVECTQPPAP-- 1622
Query: 2354 AAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDV-VDGAVALENTSEGMGGPSPPLV 2412
A+EEEK + P G ++E E + + E M+ G +E E P+V
Sbjct: 1623 ASEEEKVPV--EPPEGEE--KVEKAEVKERTEEAMETDPKGNADVEKVEEKAAVDLTPIV 1678
Query: 2413 IAEDKTENEIEED 2425
+ EDK E + EE+
Sbjct: 1679 V-EDKEEKKEEEE 1690
Score = 64 (27.6 bits), Expect = 6.1e-55, Sum P(3) = 6.1e-55
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 1266 SSPDDKSLPMVPNLETAPPGFD-IPIEKHN--EQSRNQNNPEVKG--EETPVSSEAPAST 1320
S+P D P P APP D I +E++N E+ + EVK E V P +
Sbjct: 1566 STPGDTQ-PNTP--APAPPAEDGIKVEENNLKEEESAEAEKEVKSVPPEAAVECTQPPAP 1622
Query: 1321 EAFEQEKVT----NTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEI 1374
A E+EKV V A++ ++T AMET P + +EK E++ ++
Sbjct: 1623 -ASEEEKVPVEPPEGEEKVEKAEVK--ERT---EEAMETDPKGNADVEKVEEKAAVDL 1674
Score = 60 (26.2 bits), Expect = 1.6e-54, Sum P(3) = 1.6e-54
Identities = 27/115 (23%), Positives = 48/115 (41%)
Query: 1946 QPSSSLAPWEAKIDGSS-EKDPVSSQSVLEGSKETVAEAGDQ-MDISIMPEKLPEHLDIP 2003
QP++ AP DG E++ + + E KE + + ++ + P E +P
Sbjct: 1572 QPNTP-APAPPAEDGIKVEENNLKEEESAEAEKEVKSVPPEAAVECTQPPAPASEEEKVP 1630
Query: 2004 ASLATPEEKTEGSEKDPDSSFAAQEDPKES--VVEAGDQMGVSLGGATVMEKSSE 2056
EEK E +E + A + DPK + V + ++ V L V +K +
Sbjct: 1631 VEPPEGEEKVEKAEVKERTEEAMETDPKGNADVEKVEEKAAVDLTPIVVEDKEEK 1685
Score = 50 (22.7 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 34/132 (25%), Positives = 53/132 (40%)
Query: 2245 PSASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPV- 2303
PS + + P A + I E N+++ + + S E +E P
Sbjct: 1565 PSTPGDTQPNTPAPAPPAEDGIKVEEN-NLKEEESAEAEKEVKSVP-PEAAVECTQPPAP 1622
Query: 2304 GSEKESIASAVPLDESKGPDAEVSSQT--AIEGG--GVVSIP-VPEEADGPASFLAAE-- 2356
SE+E + P E K AEV +T A+E G + V E+A + + E
Sbjct: 1623 ASEEEKVPVEPPEGEEKVEKAEVKERTEEAMETDPKGNADVEKVEEKAAVDLTPIVVEDK 1682
Query: 2357 EEKNECSDKEPV 2368
EEK E +K+ V
Sbjct: 1683 EEKKEEEEKKEV 1694
Score = 49 (22.3 bits), Expect = 2.2e-53, Sum P(3) = 2.2e-53
Identities = 33/139 (23%), Positives = 51/139 (36%)
Query: 1186 EVAKKQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASK 1245
E KK S TPT TP G PN P ++ V ++ A K
Sbjct: 1547 EENKKMSQPGSPSPKTPTPSTP--GDTQPN-TPAPAPPAEDGIKVEENNLKEEESAEAEK 1603
Query: 1246 -TEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPE 1304
+++ PE + + A +S ++K VP PP + +EK + R + E
Sbjct: 1604 EVKSVPPEAAVEC--TQPPAPASEEEK----VP---VEPPEGEEKVEKAEVKERTEEAME 1654
Query: 1305 V--KGEETPVSSEAPASTE 1321
KG E A+ +
Sbjct: 1655 TDPKGNADVEKVEEKAAVD 1673
Score = 48 (22.0 bits), Expect = 2.8e-53, Sum P(3) = 2.8e-53
Identities = 12/47 (25%), Positives = 18/47 (38%)
Query: 739 SPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSA 785
+P P P + + E N ES + V S+P + P A
Sbjct: 1575 TPAPAPPAEDGIKVEENNLKEEESAEAEKEVKSVPPEAAVECTQPPA 1621
Score = 43 (20.2 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 537 EEQWTEEEFEKMCQAESSDSPK-LKEEGLEKSL 568
+E+ EEE +K ++ ++PK L +E +K++
Sbjct: 1682 KEEKKEEEEKKEVMLQNGETPKDLNDEKQKKNI 1714
Score = 43 (20.2 bits), Expect = 9.5e-53, Sum P(3) = 9.5e-53
Identities = 28/111 (25%), Positives = 48/111 (43%)
Query: 1981 AEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ 2040
AE G +++ + + E+ + PE E ++ P + A E+ K V +
Sbjct: 1582 AEDGIKVEENNLKEEESAEAEKEVKSVPPEAAVECTQ--PPAP--ASEEEKVPVEPPEGE 1637
Query: 2041 MGVSLGGATVMEKSSEDLATPPLSLANEEEMIEGFDNDPTGISMAVMDSKE 2091
V A V E++ E + T P A+ E++ E D T I V++ KE
Sbjct: 1638 EKVEK--AEVKERTEEAMETDPKGNADVEKVEEKAAVDLTPI---VVEDKE 1683
Score = 42 (19.8 bits), Expect = 1.2e-52, Sum P(3) = 1.2e-52
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 1498 SVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAE--VAKCPSDAIV 1551
S KT + P + +P + +P V + E S EAE V P +A V
Sbjct: 1559 SPKTPTPSTPGDTQPNTPAPAPPAEDGIKVEENNLKEEESAEAEKEVKSVPPEAAV 1614
Score = 41 (19.5 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSS 977
P+ E++ ++ Q P T + +TPA P + G + + + E S+
Sbjct: 1541 PELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAEDG-IKVEENNLKEEESA 1599
Score = 40 (19.1 bits), Expect = 6.1e-55, Sum P(3) = 6.1e-55
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 2171 ETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDG 2213
E +EEEK E+ + ++DE + ++ ++ DG
Sbjct: 1684 EKKEEEEKKEVMLQNGETPKDLNDEKQKKNIKQRFMFNI-ADG 1725
Score = 39 (18.8 bits), Expect = 3.6e-53, Sum P(3) = 3.6e-53
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 2171 ETVQEEEKTELSCEKQPIGSS-VD--DESKGPEVEPCVQMD 2208
E + +E+TE + E P G++ V+ +E ++ P V D
Sbjct: 1641 EKAEVKERTEEAMETDPKGNADVEKVEEKAAVDLTPIVVED 1681
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 646 (232.5 bits), Expect = 4.3e-57, Sum P(2) = 4.3e-57
Identities = 163/412 (39%), Positives = 220/412 (53%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF V++TT+E ++ D P+L KIQW ++IDE HR+KN +CKL LK H++LLT
Sbjct: 366 KFQVVITTFEMILA--DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLT 423
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F + F GD + +
Sbjct: 424 GTPLQNSVEELFSLLNFLEPQQFPSETAFLEEF-------GDLKTEEQ----------VK 466
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + SKG +
Sbjct: 467 KLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--SKGAN 524
Query: 201 VHN------SVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEM 246
HN ++MELR CNHPYL E++ P L +++ GKL +
Sbjct: 525 QHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVL 584
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
+D+LLPKL A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F +
Sbjct: 585 IDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK 644
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 645 PDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL 704
Query: 367 ETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
T + E ++ A KLG+ Q I N + E +E LLR+
Sbjct: 705 ITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKME-VEDLLRK 755
Score = 55 (24.4 bits), Expect = 3.5e-56, Sum P(3) = 3.5e-56
Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEG 2403
E GP+ + E+E+ E D V + V++ S P+A A D + G V E S G
Sbjct: 1541 EAKAGPSQSHSEEDEEEEDDDNSEVAADVTEGLSG-PKATA--SCDEL-GDVNSERGSLG 1596
Query: 2404 MGGPSPPLVIAEDKTEN 2420
+G P+ + EN
Sbjct: 1597 LGTLKAPMEPGPEGREN 1613
Score = 47 (21.6 bits), Expect = 4.3e-57, Sum P(2) = 4.3e-57
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 696 SACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASD---DIPSPGPDPKTN-EQPQ 751
+A STP G +Q+ + VP K + L SD D+P G DP+T+ ++P+
Sbjct: 1870 AAATSTPQPVPAAG--VQAEKAVPN---KSLLDWLRQQSDYTLDVPGFGTDPETHRDKPK 1924
Score = 46 (21.3 bits), Expect = 5.5e-57, Sum P(2) = 5.5e-57
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 2383 KAFEPMDVVDGAVALENTSEGMGGPSPPLVI 2413
KAFE A++ + EGM PSPP V+
Sbjct: 1047 KAFEGTPA-SPALSAQVCVEGMLHPSPPAVL 1076
Score = 46 (21.3 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 46/211 (21%), Positives = 77/211 (36%)
Query: 1792 PGADNPEGGVI--VPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDG 1849
P PE VP E M +K D+ S + ++ + +A E I + P +
Sbjct: 1465 PSPSTPESDPSRSVPAELCEAMQQKRDLGSP----APVLPEHRAMEGVISMGLYGPSLHN 1520
Query: 1850 FS---PRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSL 1906
+ P + L+ E G S H E E+ E+ ++ A E + G
Sbjct: 1521 YDVKVPPEQRFI--NLLQEKGMEAKAGPSQSHSEEDEEEEDDDNSEVA-ADVTEGLSGPK 1577
Query: 1907 DKDPDSNLVVLEDSKGSIG-DQMDC-CQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEK 1964
L + +GS+G + + G EN S ++L D E+
Sbjct: 1578 ATASCDELGDVNSERGSLGLGTLKAPMEPGPEGRENHS--LHEENTLQHLPDGPDKYLEE 1635
Query: 1965 DPVSSQSVLEGSKETVAEAGDQMDISIMPEK 1995
+ SS SVL G + + +A ++ EK
Sbjct: 1636 ESKSSTSVLPGEIDDLQDARAPTIAQLLQEK 1666
Score = 44 (20.5 bits), Expect = 2.4e-55, Sum P(3) = 2.4e-55
Identities = 33/132 (25%), Positives = 47/132 (35%)
Query: 1985 DQMDI-SIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGV 2043
DQMD + E P + S + P E E ++ D A P+ +E MG+
Sbjct: 1454 DQMDCQNEEAEPSPSTPESDPSRSVPAELCEAMQQKRDLGSPAPVLPEHRAMEGVISMGL 1513
Query: 2044 ---SLGGATV------------MEKSSEDLATPPLSLANEEEMIEGFDNDPTGISMAVMD 2088
SL V EK E A P S + E+E E DN +
Sbjct: 1514 YGPSLHNYDVKVPPEQRFINLLQEKGMEAKAGPSQSHSEEDEEEEDDDNSEVAADVTEGL 1573
Query: 2089 SKECAAEAADQM 2100
S A + D++
Sbjct: 1574 SGPKATASCDEL 1585
Score = 42 (19.8 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 21/110 (19%), Positives = 47/110 (42%)
Query: 1352 AMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEA-IVAGIEVFKPENKTDGDSVEK 1410
A +TA ++ + + V G+ +D V G +V G + +++ + E
Sbjct: 1130 AQDTAERSELCLRRAVRGEGSNVDESVTGNREHRQGRXMLVPGNHGYWLQDEVFRRASEM 1189
Query: 1411 LEDTVD-DHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMK 1459
D+V+ + + L+ SP S + P + + +S+ P L+++
Sbjct: 1190 --DSVNKEMQKSRSLVAMSPSPSSLPKVMRPNSIWQKASRWPQVMVLLLQ 1237
Score = 39 (18.8 bits), Expect = 3.5e-56, Sum P(3) = 3.5e-56
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 939 PATHDSSSQPSGSTPAQV-PSMDLGNVASDTKEVLSENSSSKG 980
P+ S PS S PA++ +M VL E+ + +G
Sbjct: 1465 PSPSTPESDPSRSVPAELCEAMQQKRDLGSPAPVLPEHRAMEG 1507
Score = 39 (18.8 bits), Expect = 3.5e-56, Sum P(3) = 3.5e-56
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 943 DSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPIL 986
+ ++PS STP PS +V ++ E + + G P+L
Sbjct: 1460 NEEAEPSPSTPESDPSR---SVPAELCEAMQQKRDL-GSPAPVL 1499
Score = 39 (18.8 bits), Expect = 3.7e-55, Sum P(4) = 3.7e-55
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 2138 DPVNSSVTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTE 2180
+P S+ + S+ AE C+ + R G A + E E
Sbjct: 1464 EPSPSTPESDPSRSVPAELCEAMQQKRDLGSPAPVLPEHRAME 1506
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 406 (148.0 bits), Expect = 4.8e-57, Sum P(3) = 4.8e-57
Identities = 90/227 (39%), Positives = 133/227 (58%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL++LD+LL LK HRVL +S T++++++ED++ F++Y+YLRLDG + DR ++
Sbjct: 1767 GKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRDMV 1826
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
D F Q D F FLLS RA G+G+NL +ADTVI +D+DWNP VD QAQ RAHR+GQ R V
Sbjct: 1827 DDF-QSDPSIFAFLLSTRACGIGINLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQTRPV 1885
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDR---REYLESLLRECKK 418
V R T T+EE++ A+ K + + I G F++N D+ E + LL + +
Sbjct: 1886 TVYRLITKNTIEEKILKRAKQKHQIQSIVIAGGKFESNPEELDQVGENEAISFLLDDDEL 1945
Query: 419 EEXXXXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRG 465
EE R + E +V DK ++ T + + +G
Sbjct: 1946 EERFKNQIDPATGKK--RKQPEPEVPSIADKPFSPNDIPTTKPVNKG 1990
Score = 290 (107.1 bits), Expect = 4.8e-57, Sum P(3) = 4.8e-57
Identities = 65/214 (30%), Positives = 113/214 (52%)
Query: 13 YSREKIVHQK--FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK 70
++ +K+ H+ F+VL+T+Y ++ D +++W Y+++DE H IK+++ L
Sbjct: 1256 WNPKKLYHRNSPFHVLITSYNVIVR--DEKYFHRLRWQYMVLDEAHAIKSSASNRWKTLM 1313
Query: 71 HYQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXX 130
+ +RLLLTGTP F+S ++F++WF+K E++ +
Sbjct: 1314 SFNCRNRLLLTGTPIQNSMAELWALLHFIMPTFFDSHDEFAEWFSKDIENHAMSQGGLNE 1373
Query: 131 XXXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL 190
+NRLH +L+PF+LRR+K VENE+P K E V C + QK L + + N+
Sbjct: 1374 HQ-------LNRLHMILKPFMLRRIKRDVENEMPSKTEVEVYCNLTHRQKKLYQSIRSNI 1426
Query: 191 -------GSIGNSKG--RSVHNSVMELRNICNHP 215
G+ + +G +++ N VM+ R +CNHP
Sbjct: 1427 SITELLGGASFSEQGSMKALMNFVMQFRKVCNHP 1460
Score = 59 (25.8 bits), Expect = 4.8e-57, Sum P(3) = 4.8e-57
Identities = 24/104 (23%), Positives = 34/104 (32%)
Query: 1170 GKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVTPTVETPPPGFNSPNE-----NPGELTGT 1224
G D ++D + S +PT PP G PG +G
Sbjct: 2028 GGDTSTASTTTTATTTSSTTSSTNDPSSTSTSPTTSPPPTGVKPTKAAKVPGKPGRPSGK 2087
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSP 1268
+ TP +T S T + P A I + AN+SP
Sbjct: 2088 PKGYYKKAPATPTPSNTTLS-TPSTSPTMVTTAP-IGS-ANTSP 2128
Score = 51 (23.0 bits), Expect = 3.3e-56, Sum P(3) = 3.3e-56
Identities = 28/120 (23%), Positives = 48/120 (40%)
Query: 680 QPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGE-QVPRRRGKKIGLVLPAASDDIP 738
QP +A S + P+T KGR + QS E +VP+++G P
Sbjct: 1963 QPEPEVPSIADKPFSPNDIPTTKPVNKGRPPKEQSKEPKVPKKKG--------------P 2008
Query: 739 SPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSA 798
PG ++ ++E+ GG+ S+ TA S + S S + P+++
Sbjct: 2009 KPG-----YKRIKTEAGGGGGGDGGGDTSTASTTTTATTTSSTTSSTNDPSSTSTSPTTS 2063
Score = 49 (22.3 bits), Expect = 5.4e-56, Sum P(3) = 5.4e-56
Identities = 17/75 (22%), Positives = 29/75 (38%)
Query: 678 SSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRR-RGKKIGLVLPAASDD 736
S+ PTT+ P A+ P P +P G+ + ++ P L P+ S
Sbjct: 2057 STSPTTSPPPTGVKPTKAAKVPGKPGRPSGKPKGYY--KKAPATPTPSNTTLSTPSTSPT 2114
Query: 737 IPSPGPDPKTNEQPQ 751
+ + P N P+
Sbjct: 2115 MVTTAPIGSANTSPK 2129
Score = 48 (22.0 bits), Expect = 4.0e-54, Sum P(4) = 4.0e-54
Identities = 21/81 (25%), Positives = 31/81 (38%)
Query: 1472 DVADHSRETPILSGSPINSGT-ECSTVSVKTDVGNHPQNVEPTSAS--PERSG-PQNSAV 1527
D + S T + S S T + S+ S P V+PT A+ P + G P
Sbjct: 2030 DTSTASTTTTATTTSSTTSSTNDPSSTSTSPTTSPPPTGVKPTKAAKVPGKPGRPSGKPK 2089
Query: 1528 GFCDKSEI-PSMEAEVAKCPS 1547
G+ K+ P+ PS
Sbjct: 2090 GYYKKAPATPTPSNTTLSTPS 2110
Score = 43 (20.2 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 1395 EVFKPENKTDGDSVEKLEDTVDDHSLVK-ELIHRSPDHSDMV-----IGNVPGNTSEDSS 1448
E + P N TD D + T+D ++ K I + +D I PG ++ SS
Sbjct: 1515 EAWNPLNSTDSDQIRTR--TIDRFNIFKANNISNNSSGNDTFSFSRFINLEPGELNKLSS 1572
Query: 1449 KMPL-ETPLIMKSTE 1462
++ L + L+ ++TE
Sbjct: 1573 ELNLLDFYLLNQATE 1587
Score = 39 (18.8 bits), Expect = 6.8e-31, Sum P(3) = 6.8e-31
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 65 LNADLKHYQ 73
LNADLK YQ
Sbjct: 1158 LNADLKPYQ 1166
Score = 39 (18.8 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 2065 LANEEEMIEGFDNDPTGISMAVMDSKEC 2092
L + +M++ F +DP+ I ++ ++ C
Sbjct: 1819 LDDRRDMVDDFQSDPS-IFAFLLSTRAC 1845
Score = 37 (18.1 bits), Expect = 4.0e-54, Sum P(4) = 4.0e-54
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 1362 PIEKGVEQSGTEIDAKVKWKNTPLPG 1387
P+ KG + KV K P PG
Sbjct: 1986 PVNKGRPPKEQSKEPKVPKKKGPKPG 2011
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 646 (232.5 bits), Expect = 5.5e-57, Sum P(2) = 5.5e-57
Identities = 163/412 (39%), Positives = 220/412 (53%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF V++TT+E ++ D P+L KIQW ++IDE HR+KN +CKL LK H++LLT
Sbjct: 366 KFQVVITTFEMILA--DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLT 423
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F + F GD + +
Sbjct: 424 GTPLQNSVEELFSLLNFLEPQQFPSETAFLEEF-------GDLKTEEQ----------VK 466
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + SKG +
Sbjct: 467 KLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--SKGAN 524
Query: 201 VHN------SVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEM 246
HN ++MELR CNHPYL E++ P L +++ GKL +
Sbjct: 525 QHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVL 584
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
+D+LLPKL A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F +
Sbjct: 585 IDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK 644
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 645 PDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL 704
Query: 367 ETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
T + E ++ A KLG+ Q I N + E +E LLR+
Sbjct: 705 ITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKME-VEDLLRK 755
Score = 53 (23.7 bits), Expect = 5.7e-56, Sum P(3) = 5.7e-56
Identities = 20/68 (29%), Positives = 32/68 (47%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEG 2403
E GP+ + E+E+ E D V + V++ S P+A A D + G ++ S
Sbjct: 1541 EAKAGPSQSHSEEDEEEEDDDNSEVAADVTEGLSG-PKATA--SCDELGG----QSQSRA 1593
Query: 2404 MGGPSPPL 2411
P+PPL
Sbjct: 1594 FSLPAPPL 1601
Score = 47 (21.6 bits), Expect = 2.4e-55, Sum P(3) = 2.4e-55
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 696 SACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASD---DIPSPGPDPKTN-EQPQ 751
+A STP G +Q+ + VP K + L SD D+P G DP+T+ ++P+
Sbjct: 1872 AAATSTPQPVPAAG--VQAEKAVPN---KSLLDWLRQQSDYTLDVPGFGTDPETHRDKPK 1926
Score = 46 (21.3 bits), Expect = 5.5e-57, Sum P(2) = 5.5e-57
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 2383 KAFEPMDVVDGAVALENTSEGMGGPSPPLVI 2413
KAFE A++ + EGM PSPP V+
Sbjct: 1047 KAFEGTPA-SPALSAQVCVEGMLHPSPPAVL 1076
Score = 46 (21.3 bits), Expect = 3.1e-55, Sum P(3) = 3.1e-55
Identities = 24/83 (28%), Positives = 35/83 (42%)
Query: 1296 QSRNQNNPEVKGEETPVSSEAPAS-TEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAME 1354
QS ++ + E EE +SE A TE K T +S L S + S+ PA
Sbjct: 1548 QSHSEEDEE---EEDDDNSEVAADVTEGLSGPKAT--ASCDELGG-QSQSRAFSL-PAPP 1600
Query: 1355 TAPGFDIPIEKGVEQSGTEIDAK 1377
P+ GVE G E++ +
Sbjct: 1601 LGAAGAQPLHAGVEAWGQEVEGQ 1623
Score = 44 (20.5 bits), Expect = 2.4e-55, Sum P(3) = 2.4e-55
Identities = 33/132 (25%), Positives = 47/132 (35%)
Query: 1985 DQMDI-SIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGV 2043
DQMD + E P + S + P E E ++ D A P+ +E MG+
Sbjct: 1454 DQMDCQNEEAEPSPSTPESDPSRSVPAELCEAMQQKRDLGSPAPVLPEHRAMEGVISMGL 1513
Query: 2044 ---SLGGATV------------MEKSSEDLATPPLSLANEEEMIEGFDNDPTGISMAVMD 2088
SL V EK E A P S + E+E E DN +
Sbjct: 1514 YGPSLHNYDVKVPPEQRFINLLQEKGMEAKAGPSQSHSEEDEEEEDDDNSEVAADVTEGL 1573
Query: 2089 SKECAAEAADQM 2100
S A + D++
Sbjct: 1574 SGPKATASCDEL 1585
Score = 42 (19.8 bits), Expect = 2.4e-55, Sum P(3) = 2.4e-55
Identities = 21/110 (19%), Positives = 47/110 (42%)
Query: 1352 AMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEA-IVAGIEVFKPENKTDGDSVEK 1410
A +TA ++ + + V G+ +D V G +V G + +++ + E
Sbjct: 1130 AQDTAERSELCLRRAVRGEGSNVDESVTGNREHRQGRXMLVPGNHGYWLQDEVFRRASEM 1189
Query: 1411 LEDTVD-DHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMK 1459
D+V+ + + L+ SP S + P + + +S+ P L+++
Sbjct: 1190 --DSVNKEMQKSRSLVAMSPSPSSLPKVMRPNSIWQKASRWPQVMVLLLQ 1237
Score = 39 (18.8 bits), Expect = 5.7e-56, Sum P(3) = 5.7e-56
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 939 PATHDSSSQPSGSTPAQV-PSMDLGNVASDTKEVLSENSSSKG 980
P+ S PS S PA++ +M VL E+ + +G
Sbjct: 1465 PSPSTPESDPSRSVPAELCEAMQQKRDLGSPAPVLPEHRAMEG 1507
Score = 39 (18.8 bits), Expect = 5.7e-56, Sum P(3) = 5.7e-56
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 943 DSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPIL 986
+ ++PS STP PS +V ++ E + + G P+L
Sbjct: 1460 NEEAEPSPSTPESDPSR---SVPAELCEAMQQKRDL-GSPAPVL 1499
Score = 39 (18.8 bits), Expect = 2.4e-55, Sum P(3) = 2.4e-55
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 630 LPAPSGTVKVEKDAMTGQSTSASASLP 656
L P T D + GQS S + SLP
Sbjct: 1573 LSGPKATASC--DELGGQSQSRAFSLP 1597
Score = 39 (18.8 bits), Expect = 6.0e-55, Sum P(4) = 6.0e-55
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 2138 DPVNSSVTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTE 2180
+P S+ + S+ AE C+ + R G A + E E
Sbjct: 1464 EPSPSTPESDPSRSVPAELCEAMQQKRDLGSPAPVLPEHRAME 1506
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 643 (231.4 bits), Expect = 5.6e-57, Sum P(2) = 5.6e-57
Identities = 164/412 (39%), Positives = 221/412 (53%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+V++TT+E ++ D P+L KI W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 568 KFHVVITTFEMILA--DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLT 625
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F + F GD + +
Sbjct: 626 GTPLQNSVEELFSLLNFLEPSQFPSETAFLEEF-------GDLKTEEQ----------VK 668
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + SKG +
Sbjct: 669 KLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--SKGAN 726
Query: 201 VHN------SVMELRNICNHPYLSQLHAEEV--DTL------IPKHYLPPIVRLCGKLEM 246
HN ++MELR CNHPYL E++ D P L +++ GKL +
Sbjct: 727 QHNMPNLINTMMELRKCCNHPYLISGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVL 786
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
+D+LLPKL A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F +
Sbjct: 787 IDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK 846
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 847 PDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL 906
Query: 367 ETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
T + E ++ A KLG+ Q I N + E +E LLR+
Sbjct: 907 ITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKME-VEDLLRK 957
Score = 61 (26.5 bits), Expect = 9.5e-56, Sum P(3) = 9.5e-56
Identities = 42/194 (21%), Positives = 66/194 (34%)
Query: 685 FVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDP 744
F + PG + S PM G VP+ G GL+ + S P P
Sbjct: 2506 FAAMPPGEEVKSTLSMLPMVLPGMAA-------VPQMFGVG-GLLNTPMATTCASAVPAP 2557
Query: 745 KTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNS 804
++ S E NV + P+A SP + I SS VA N
Sbjct: 2558 LSSTTKGGVSAAEKTAEDQPGSHNVKTDPSAEDKPGPSPFSSDQPEPAITTSSPVA-FNP 2616
Query: 805 ELNTNLATAXXXXXXXXX-XXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSA 863
L ++ + Q+R +++ G+ +RR +++ G P +
Sbjct: 2617 FLIPGVSPGLIYPSMFLSPGMGMALPAMQQARHSEAAGLESQRRKRKKTKGDAP----NP 2672
Query: 864 GPESKSNLQSENNS 877
PE L+ E S
Sbjct: 2673 NPEPVPGLEREPGS 2686
Score = 59 (25.8 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 25/103 (24%), Positives = 41/103 (39%)
Query: 1218 PGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVP 1277
P T N+ +VRG+ T V L K E LK K S+ ++ LP P
Sbjct: 1969 PDPFTSKANNVTVRGEPTAVPPELLQVKQELLKEPWK----------ESTEGNQGLPPYP 2018
Query: 1278 N-LETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPAS 1319
E P D ++ ++ N + + G+ + S++ S
Sbjct: 2019 EGSELKPEDMDYESKEELDKDGNCQSQDYPGKYSEEESKSSTS 2061
Score = 53 (23.7 bits), Expect = 5.6e-57, Sum P(2) = 5.6e-57
Identities = 25/88 (28%), Positives = 35/88 (39%)
Query: 678 SSQPTTAFVP-VAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPA---- 732
+S P AF P + PG PS + P G G + + +Q R + GL
Sbjct: 2608 TSSPV-AFNPFLIPGVSPGLIYPSMFLSP-GMGMALPAMQQA--RHSEAAGLESQRRKRK 2663
Query: 733 -ASDDIPSPGPDPKTN--EQPQSESLNP 757
D P+P P+P +P SE P
Sbjct: 2664 KTKGDAPNPNPEPVPGLEREPGSEQSCP 2691
Score = 49 (22.3 bits), Expect = 2.8e-53, Sum P(4) = 2.8e-53
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 947 QPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKG 980
+PSG+ P V + G ++ SE+SSS G
Sbjct: 2123 EPSGTLPTPVLTSSTGPRGGISEPEASEHSSSSG 2156
Score = 42 (19.8 bits), Expect = 2.8e-53, Sum P(4) = 2.8e-53
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 1071 VSVPVKRHGRKTPTTG-EAPRRRGKK-QGSGPS 1101
+++P + R + G E+ RR+ KK +G P+
Sbjct: 2639 MALPAMQQARHSEAAGLESQRRKRKKTKGDAPN 2671
Score = 39 (18.8 bits), Expect = 1.9e-53, Sum P(3) = 1.9e-53
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 2006 LATPEEKTEGSEKDPDSSFAAQEDPKESVVEA-GDQMGVSL-GGATVMEKSSED 2057
L+ + T+G+ P+ +ED E V+ QM S GG + + +D
Sbjct: 1319 LSAEQGVTDGASDVPERGHTDKEDNTEDKVDGLQKQMESSSDGGDGLFAEKKDD 1372
Score = 39 (18.8 bits), Expect = 5.8e-53, Sum P(4) = 5.8e-53
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 1234 HTPVSGHTLASKTEA-LKPENKAQAGRIENIANSSPDDKSLPMVPNLETAP 1283
+TP++ T AS A L K E A P ++ P+ E P
Sbjct: 2543 NTPMAT-TCASAVPAPLSSTTKGGVSAAEKTAEDQPGSHNVKTDPSAEDKP 2592
Score = 39 (18.8 bits), Expect = 3.1e-52, Sum P(4) = 3.1e-52
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 844 PRRRGKR---QALGSPP-ISDVSAG 864
PRRRG+R + L +P ++D +G
Sbjct: 2443 PRRRGRRPRSELLKTPALVADAPSG 2467
Score = 38 (18.4 bits), Expect = 9.5e-56, Sum P(3) = 9.5e-56
Identities = 11/37 (29%), Positives = 13/37 (35%)
Query: 2245 PSASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQD 2281
P P E P+ A D E R+ PQD
Sbjct: 2678 PGLEREPGSEQSCPEPRAPAPPDREHAAQAREGGPQD 2714
Score = 38 (18.4 bits), Expect = 2.4e-53, Sum P(3) = 2.4e-53
Identities = 12/54 (22%), Positives = 21/54 (38%)
Query: 1505 NHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPSD-AIVNNLLET 1557
N P+N+ A + GP ++ S +V D +++ LET
Sbjct: 1656 NEPENLMKIEAGDDHLGPPRGSLSDMTCESFISKTQDVLSLTHDESLLPGSLET 1709
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 636 (228.9 bits), Expect = 1.0e-56, Sum P(2) = 1.0e-56
Identities = 178/571 (31%), Positives = 286/571 (50%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ L I+W +++DE HR+KN K L Y+ H+LLLT
Sbjct: 810 KFHVLLTSYELITI--DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 867
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP FN+ E F + F D S + I
Sbjct: 868 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ----------IK 910
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L S G
Sbjct: 911 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGN 970
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLCGKLEMLDRLLPKLKA 256
S+ N +M+L+ CNHPYL + A E L Y +++ GKL +L ++L KLK
Sbjct: 971 QVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKE 1030
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L ++ Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1031 QGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLL 1090
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHRIGQ V++ RF T +VEE++
Sbjct: 1091 STRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERI 1150
Query: 377 RASAEHKLGVANQSITAGFFDN--NTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXX 434
A+ K+ + + + G + S ++ + L+ E K+E
Sbjct: 1151 TQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIH 1210
Query: 435 XRSES-------EIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT-DDDL 486
+E+ D + D Q E ++++ K+ + + + + + + ++ ++++
Sbjct: 1211 YDNEAIARLLDRNQDATDDTDVQNMNEYLSSF-KVAQYVVREEDKIEEIEREIIKQEENV 1269
Query: 487 KALYEAMKI---YDAPKTGVSPNVGV-KRKGEHLGALDTQHYGRGKRAREVRSYEEQWTE 542
Y + Y+ + ++ N+G KR + + D + ++ EE+ +
Sbjct: 1270 DPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEE--D 1327
Query: 543 EEFEKMCQAESSDSPKLKEEGLEKSLPTVVS 573
E+F++ + +L+ E +K LP +++
Sbjct: 1328 EDFDERPEGRRQSKRQLRNEK-DKPLPPLLA 1357
Score = 62 (26.9 bits), Expect = 1.5e-56, Sum P(3) = 1.5e-56
Identities = 24/80 (30%), Positives = 32/80 (40%)
Query: 678 SSQPTTAFVPVAP-GSQSASACPSTPMQP----KGRGRRI---QSGEQVPRRRGKKIGLV 729
+S PT P P S + S C S P P KG G R + + P + +K V
Sbjct: 1487 ASSPTKTS-PTTPEASTTNSPCTSKPATPAPSEKGDGVRTLLEKDDTENPEEKPEKSSKV 1545
Query: 730 LPAASDDIPSPGPDPKTNEQ 749
+I SP P P E+
Sbjct: 1546 GEKMETEIDSPSPAPSLGER 1565
Score = 56 (24.8 bits), Expect = 6.2e-56, Sum P(3) = 6.2e-56
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKG 788
+P PDP + + S + +P+ T + + ++ P P + +PS KG
Sbjct: 1470 MPELMPDPSADSKRSSRASSPTKTSPTTPEASTTNSPCTSKPATPAPSE-KG 1520
Score = 53 (23.7 bits), Expect = 1.0e-56, Sum P(2) = 1.0e-56
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E+ D + + EE++E D+ P G S+ + + + K P+
Sbjct: 1311 EDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPL 1355
Score = 45 (20.9 bits), Expect = 1.5e-56, Sum P(3) = 1.5e-56
Identities = 31/148 (20%), Positives = 59/148 (39%)
Query: 1972 VLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEK------TEGSEKDPDSSFA 2025
VL +E +++ + D++ +P L I A L E ++G+E P +F
Sbjct: 1787 VLNQLEELLSDM--KADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAFP 1844
Query: 2026 A---QEDPKESVVEAGDQMG-VSLGGATVMEKSSEDLAT-----PPLSLANEEEMIEGFD 2076
P + +G ++ GA + + T PP+ + E+EM+
Sbjct: 1845 PGPYATPPGYGAAFSAAPVGALAAAGANYSQMPAGSFITATTNGPPVLVKKEKEMVGALV 1904
Query: 2077 NDPTGISMAVMDSKECAAEAADQMCVSE 2104
+D G+ D KE A + +C+ +
Sbjct: 1905 SDGLGL-----DRKE--PRAGEVICIDD 1925
Score = 45 (20.9 bits), Expect = 8.8e-55, Sum P(3) = 8.8e-55
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 1486 SPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKC 1545
S +S T+ S + + N P +P + +P G + D +E P + E +
Sbjct: 1485 SRASSPTKTSPTTPEASTTNSPCTSKPATPAPSEKGDGVRTLLEKDDTENPEEKPEKSSK 1544
Query: 1546 PSDAIVNNLLETPLDIKSIG 1565
+ + + ++P S+G
Sbjct: 1545 VGEKMETEI-DSPSPAPSLG 1563
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 657 (236.3 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 159/410 (38%), Positives = 224/410 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 262 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 319
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 320 GTPLQNTVEELFSLLHFLEPGRFPSETTFMQEF-------GDLKTEEQ----------VQ 362
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 363 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQA 422
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTL---IPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ +T P L +++ GKL ++D
Sbjct: 423 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLID 482
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 483 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPD 542
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 543 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 602
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
+ E ++ A KLG+ QS++ N + ++ +E LLR+
Sbjct: 603 RNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRK 652
Score = 46 (21.3 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 1295 EQSRNQNNPEVKGEETPVSSEAPASTEAF 1323
E R +PE K TP E T +F
Sbjct: 1036 EFDREDEDPEYKPTRTPFKDEIDVRTSSF 1064
Score = 41 (19.5 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQ 550
YG G R ++ S Y+ Q TE++ E +C+
Sbjct: 805 YGWG-RWTDILSHGRYKRQLTEQDVETICR 833
Score = 41 (19.5 bits), Expect = 1.4e-56, Sum P(4) = 1.4e-56
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 1777 KADVVLDEHGKVQLLPGADNPEGGVIVPE 1805
+ +V+ D+ ++ L GAD+ E V +PE
Sbjct: 938 RQEVIGDQADRI--LEGADSSEVDVWIPE 964
Score = 41 (19.5 bits), Expect = 1.4e-56, Sum P(4) = 1.4e-56
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 2144 VTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVD 2193
V + D+K AE +L GG E +E+E E + P +D
Sbjct: 1010 VGMPDAKAIAAEQRGT-DMLADGGDGGEFDREDEDPEYKPTRTPFKDEID 1058
Score = 38 (18.4 bits), Expect = 7.2e-56, Sum P(4) = 7.2e-56
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 1296 QSRNQNNPEVKGEETPVSSEAPASTEAFEQEK 1327
+S ++ P K S+ A +E F EK
Sbjct: 769 ESDSEEKPSTKPRRPQDKSQGYARSECFRVEK 800
Score = 37 (18.1 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 1945 CQPSSSLAPW-EAKIDGSSEKD 1965
CQPS L W E G +KD
Sbjct: 1269 CQPSLDLPEWWEC---GKHDKD 1287
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 645 (232.1 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 151/378 (39%), Positives = 212/378 (56%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
+F ++TT+E ++ +L+ I+W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 968 RFQAIITTFEMILGGCG--ELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLT 1025
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1026 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF-------GDLKTEEQ----------VQ 1068
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE +L K E ++ E + QK + + E+N + G++
Sbjct: 1069 KLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQT 1128
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTLIPK---HYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL + E++ DT P +L +++ GKL ++D
Sbjct: 1129 NVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLID 1188
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPK+KA H+VL FS M R LD++EDYL K+Y Y R+DG G R A ID+F++ D
Sbjct: 1189 KLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPD 1248
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1249 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVT 1308
Query: 369 VQTVEEQVRASAEHKLGV 386
+ E ++ A KLG+
Sbjct: 1309 RNSYEREMFDRASLKLGL 1326
Score = 58 (25.5 bits), Expect = 1.6e-54, Sum P(5) = 1.6e-54
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 1795 DNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPR 1853
D +G V PE+K KDDI + + LV+ D + GD++ P + R
Sbjct: 1726 DYMDGDVEDPEYKPAPAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTR 1784
Score = 56 (24.8 bits), Expect = 1.6e-54, Sum P(5) = 1.6e-54
Identities = 43/176 (24%), Positives = 74/176 (42%)
Query: 1861 ELVDEAGDHMGVSHSPVHVV----------EREKSEELGLPSLSSATKEEKIDGSLDKDP 1910
+L+ A H GVS + H++ +R S+ S +S ++ +L P
Sbjct: 1969 DLLIGAAKH-GVSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASP 2027
Query: 1911 DSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSS--EKDPVS 1968
++L L D+KG I ++M V ENL + +P SS + ++ + + +PVS
Sbjct: 2028 LTSLPRLLDAKGIILEEMK------VKSENLKE--EPQSSEEESMSSVETRTLIKSEPVS 2079
Query: 1969 SQS-VLEGSKETVAEAGD-QMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDS 2022
++ VL + G + D ++ + PAS P GSE DS
Sbjct: 2080 PKNGVLPQATGDQKSGGKCETDRRMVAARTEPLTPNPAS-KKPRVHKRGSESSSDS 2134
Score = 55 (24.4 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 40/158 (25%), Positives = 65/158 (41%)
Query: 1291 EKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVT 1350
E + R ++ G E VSS S+ A NT++ N L+ + +
Sbjct: 2749 ESEGKTERTESQSSENGGENSVSSSPSTSSTA-----ALNTAAAANPLALNPLLLSNILY 2803
Query: 1351 PAMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEK 1410
P M PG ++ I + QS T D V+ KN+ L G + +EV K E+ D +K
Sbjct: 2804 PGMLLTPGLNLHIPT-LSQSNT-FD--VQNKNSDL-GSS--KSVEV-KEEDSRIKDQEDK 2855
Query: 1411 LEDTVDDHSLVKELIHRSPDHSDMVIGN-VPGNTSEDS 1447
+ L + + +D G+ ++SEDS
Sbjct: 2856 --GGTEPSPLNENSTDEGSEKADASSGSDSTSSSSEDS 2891
Score = 55 (24.4 bits), Expect = 4.7e-56, Sum P(3) = 4.7e-56
Identities = 27/139 (19%), Positives = 53/139 (38%)
Query: 700 STPMQPKGRGRRIQSGEQVPRRRGK-KIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPS 758
S P+ PK +G+Q + GK + + AA + +P P K +P+
Sbjct: 2075 SEPVSPKNGVLPQATGDQ--KSGGKCETDRRMVAARTEPLTPNPASK---KPRVHKRGSE 2129
Query: 759 GGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXX 818
+ +D SS + S S S +SG+ SS+ + S +++ ++
Sbjct: 2130 SSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSS 2189
Query: 819 XXXXXXXXXMQTKGQSRKT 837
+ + Q R++
Sbjct: 2190 SSSSEESDSDEEEAQKRES 2208
Score = 54 (24.1 bits), Expect = 2.5e-54, Sum P(5) = 2.5e-54
Identities = 31/129 (24%), Positives = 48/129 (37%)
Query: 1903 DGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSS 1962
+ S D D DS S C S + S C +SS + S+
Sbjct: 2129 ESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSS------SSST 2182
Query: 1963 EKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEK---- 2018
SS S E S EA + + M E + ASL+T +++T+ S +
Sbjct: 2183 SSSSSSSSSSSEESDSDEEEAQKRESTTHMKAYDEESV---ASLSTTQDETQDSFQMNNG 2239
Query: 2019 DPDSSFAAQ 2027
P+S++ Q
Sbjct: 2240 TPESAYILQ 2248
Score = 53 (23.7 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 41/198 (20%), Positives = 69/198 (34%)
Query: 713 QSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGN-VSS 771
QSG +P ++I L P +++ G PK+ + + + +T+ GN + +
Sbjct: 2605 QSGF-LPESMYERI-LTGPVVREEVSRRGRRPKSGIAKATAAA--AAASATSVSGNPLLA 2660
Query: 772 IPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTK 831
P D + A++ + A L + T L +
Sbjct: 2661 NGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMG-MPTGLPSGGEAKNMAAMFPMLLSGMA 2719
Query: 832 GQSRKTQSGGVT--PRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMG 889
G GG+ P G GS S S G ++ QS N G +S S S
Sbjct: 2720 GLPNLLGMGGLLTKPTESGTEDKKGSD--SKESEGKTERTESQSSENGGENSVSSSPSTS 2777
Query: 890 KQDALSQELS-NKIQVQP 906
AL+ + N + + P
Sbjct: 2778 STAALNTAAAANPLALNP 2795
Score = 53 (23.7 bits), Expect = 3.6e-54, Sum P(4) = 3.6e-54
Identities = 21/83 (25%), Positives = 32/83 (38%)
Query: 1444 SEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDV 1503
SE SS ++ S S S + HSR SGS +S + CS+ S +
Sbjct: 2128 SESSSDSDSDSE--RSSCSSRSSSSSSSSSCSHSR-----SGSSSSSSSSCSSASSSSSS 2180
Query: 1504 GNHPQNVEPTSASPERSGPQNSA 1526
+ +S+S E + A
Sbjct: 2181 STSSSSSSSSSSSEESDSDEEEA 2203
Score = 52 (23.4 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 29/137 (21%), Positives = 47/137 (34%)
Query: 1082 TPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADV 1141
TP + + R K+GS S S D++ + S S S S RS ++
Sbjct: 2113 TPNPA-SKKPRVHKRGSESSSDSDS---DSERSSCSSRSSSSSSSSSCSHSRSGSSSSSS 2168
Query: 1142 NDVARVMKEIFSETCSSKAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVT 1201
+ + S T SS + + SS E D + K ++ S++
Sbjct: 2169 SSCSSASSSSSSSTSSSSSSSSSSS--EESDSDEEEAQKRESTTHM--KAYDEESVASLS 2224
Query: 1202 PTVETPPPGFNSPNENP 1218
T + F N P
Sbjct: 2225 TTQDETQDSFQMNNGTP 2241
Score = 52 (23.4 bits), Expect = 4.2e-55, Sum P(4) = 4.2e-55
Identities = 32/153 (20%), Positives = 60/153 (39%)
Query: 833 QSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQD 892
QS+ S TP + + AL + P++ + ++K + E L + +++
Sbjct: 2003 QSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAKGIILEEMKVKSENLKEEPQSSEEE 2062
Query: 893 ALSQ-ELSNKIQVQPCGVATSA-DVAGPDQKPA---EQSVRVVQSN-QPINL-PATHDSS 945
++S E I+ +P A DQK E R+V + +P+ PA+
Sbjct: 2063 SMSSVETRTLIKSEPVSPKNGVLPQATGDQKSGGKCETDRRMVAARTEPLTPNPASKKPR 2122
Query: 946 SQPSGSTPAQVPSMDLGNVASDTKEVLSENSSS 978
GS + D + ++ S +SSS
Sbjct: 2123 VHKRGSESSSDSDSDSERSSCSSRSSSSSSSSS 2155
Score = 49 (22.3 bits), Expect = 8.4e-55, Sum P(3) = 8.4e-55
Identities = 37/157 (23%), Positives = 67/157 (42%)
Query: 1398 KPEN-KTDGDSVEKLE-DTVDDHSLVK-ELIHRSPDHSDMVIGNVPGNTSEDSSKMPLET 1454
K EN K + S E+ +V+ +L+K E + SP + V+ G+ + K +
Sbjct: 2048 KSENLKEEPQSSEEESMSSVETRTLIKSEPV--SPKNG--VLPQATGD-QKSGGKCETDR 2102
Query: 1455 PLIMKSTEG--PSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDVGNHPQNVEP 1512
++ TE P+ + K V H R + S S +S +E S+ S ++ +
Sbjct: 2103 RMVAARTEPLTPNPASKKPRV--HKRGSE--SSSDSDSDSERSSCSSRSSSSS-----SS 2153
Query: 1513 TSASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDA 1549
+S S RSG +S+ C + S + + S +
Sbjct: 2154 SSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSS 2190
Score = 48 (22.0 bits), Expect = 1.1e-54, Sum P(4) = 1.1e-54
Identities = 31/157 (19%), Positives = 65/157 (41%)
Query: 850 RQALGSPPISDVSAG-PESKSNLQSENNSGGLRLSKSVSMGKQDALSQE-LSNKIQVQPC 907
R + S P+S + P++ + +S G + + + + L+ S K +V
Sbjct: 2070 RTLIKSEPVSPKNGVLPQATGDQKS---GGKCETDRRMVAARTEPLTPNPASKKPRVHKR 2126
Query: 908 GVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASD 967
G +S+D + D + + S R S+ + + SS S S+ + S + +S
Sbjct: 2127 GSESSSD-SDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSS 2185
Query: 968 TKEVLS---ENSSSKGGVIPILALSNMKAVERVNIQS 1001
+ S E+ S + + ++MKA + ++ S
Sbjct: 2186 SSSSSSSSEESDSDEEEAQKRESTTHMKAYDEESVAS 2222
Score = 47 (21.6 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
Identities = 35/163 (21%), Positives = 59/163 (36%)
Query: 728 LVLPAASDDIPSPGPDPKTNE----QPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSP 783
L P S G D K +E + +S+S G S ++ + SS + +P
Sbjct: 2731 LTKPTESGTEDKKGSDSKESEGKTERTESQSSENGGENSVSSSPSTSSTAALNTAAAANP 2790
Query: 784 SAVKGQ--SGTIDPSSAVA-ALNSELNT--NLATAXXXXXXXXXXXXXXMQTKGQ-SR-K 836
A+ S + P + LN + T T ++ K + SR K
Sbjct: 2791 LALNPLLLSNILYPGMLLTPGLNLHIPTLSQSNTFDVQNKNSDLGSSKSVEVKEEDSRIK 2850
Query: 837 TQS--GGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNS 877
Q GG P + +D S+G +S S+ +++S
Sbjct: 2851 DQEDKGGTEPSPLNENSTDEGSEKADASSGSDSTSSSSEDSDS 2893
Score = 46 (21.3 bits), Expect = 4.7e-56, Sum P(3) = 4.7e-56
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 867 SKSN-LQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPA 923
S+SN +N + L SKSV + ++D+ ++ +K +P + ++ G ++ A
Sbjct: 2820 SQSNTFDVQNKNSDLGSSKSVEVKEEDSRIKDQEDKGGTEPSPLNENSTDEGSEKADA 2877
Score = 45 (20.9 bits), Expect = 9.9e-55, Sum P(5) = 9.9e-55
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 887 SMGKQDALSQ--ELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPI 936
++G+Q L++ EL + + S V+G +P + V+ NQPI
Sbjct: 2376 ALGQQQYLTRLRELQSASETSLVNFPKSIPVSGTSIQPTLGANGVILDNQPI 2427
Score = 45 (20.9 bits), Expect = 1.1e-53, Sum P(5) = 1.1e-53
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 1960 GSSEKDPVSSQSVLEGSKETVAEAG 1984
G +E P++ S EGS++ A +G
Sbjct: 2856 GGTEPSPLNENSTDEGSEKADASSG 2880
Score = 44 (20.5 bits), Expect = 6.2e-56, Sum P(4) = 6.2e-56
Identities = 35/150 (23%), Positives = 58/150 (38%)
Query: 901 KIQVQPCGVATSADVAGPDQKPAEQS----VRVVQSNQPINLPATHDSSSQPSGSTPAQV 956
K+ Q G+A G D +Q +R +QS +L + S P T Q
Sbjct: 2356 KLTFQKQGLAQKRPFDGEDGALGQQQYLTRLRELQSASETSL--VNFPKSIPVSGTSIQ- 2412
Query: 957 PSMDLGNVASDTKEVLSENSSSKGGV--IPILALSNMKAVERVNIQSFEEKACTNASKSK 1014
P++ V D + ++ + + V + I + K V++ T++ S
Sbjct: 2413 PTLGANGVILDNQPIVKKRRGRRKNVEGVDIFFFNRNKPPNHVSL------GLTSSQIST 2466
Query: 1015 ATLPALDSITEPYTGSTNTEGISNTIHHVP 1044
PAL S T+P +GI +T VP
Sbjct: 2467 GINPAL-SYTQP-------QGIPDTESPVP 2488
Score = 44 (20.5 bits), Expect = 2.9e-54, Sum P(4) = 2.9e-54
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 1191 QSSDDKTCSVTPTVETPPPGFNSP-NENPGELTGTKNDASVRGDHTPVSGHTLASKTEAL 1249
QSS++++ S +VET + P + G L D G +A++TE L
Sbjct: 2057 QSSEEESMS---SVETRTLIKSEPVSPKNGVLPQATGDQK-SGGKCETDRRMVAARTEPL 2112
Query: 1250 KPENKAQAGRIENIANSSPDD 1270
P ++ R+ + S D
Sbjct: 2113 TPNPASKKPRVHKRGSESSSD 2133
Score = 44 (20.5 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 38/192 (19%), Positives = 62/192 (32%)
Query: 1800 GVIVPEHK--SENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDE-PQVDGFSPRSMS 1856
G+I+ E K SEN+ E+ S E + SS+ + + + PQ G
Sbjct: 2039 GIILEEMKVKSENLKEEPQSSEEESM-SSVETRTLIKSEPVSPKNGVLPQATGDQKSGGK 2097
Query: 1857 GVVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV 1916
D + A ++ +P R S S + E S S+
Sbjct: 2098 CETDRRMVAARTEP-LTPNPASKKPRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSC 2156
Query: 1917 LEDSKGSIGDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGS 1976
GS C S + + SSS + E+ D + S+ +
Sbjct: 2157 SHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEESDSDEEEAQKRESTTHMKAYD 2216
Query: 1977 KETVAEAGDQMD 1988
+E+VA D
Sbjct: 2217 EESVASLSTTQD 2228
Score = 40 (19.1 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 2348 GPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSE 2402
G + + +EE + D+E G + ++ + E D G+ + ++SE
Sbjct: 2835 GSSKSVEVKEEDSRIKDQEDKGGTEPSPLNENSTDEGSEKADASSGSDSTSSSSE 2889
Score = 40 (19.1 bits), Expect = 1.8e-54, Sum P(4) = 1.8e-54
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 1213 SP-NENPGELTGTKNDASVRGDHTPVSGHTLASKTE 1247
SP NEN + K DAS D T S S E
Sbjct: 2861 SPLNENSTDEGSEKADASSGSDSTSSSSEDSDSSNE 2896
Score = 40 (19.1 bits), Expect = 5.9e-54, Sum P(4) = 5.9e-54
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 914 DVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGN 963
D G D K +E +S N + SS PS S+ A + + N
Sbjct: 2741 DKKGSDSKESEGKTERTESQSSEN-GGENSVSSSPSTSSTAALNTAAAAN 2789
Score = 39 (18.8 bits), Expect = 4.2e-55, Sum P(4) = 4.2e-55
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 1192 SSDDKTCSVTPTVE-TPPPGFNSPNENPGELTGTKNDASVRGDHTP 1236
+S + + P + T P G E+P + K+ + GD P
Sbjct: 2460 TSSQISTGINPALSYTQPQGIPD-TESPVPVINLKDGTRLAGDDAP 2504
Score = 38 (18.4 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 12/52 (23%), Positives = 17/52 (32%)
Query: 743 DPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTID 794
D + +Q PS +TD + DS S S+ S D
Sbjct: 2846 DSRIKDQEDKGGTEPSPLNENSTDEGSEKADASSGSDSTSSSSEDSDSSNED 2897
Score = 38 (18.4 bits), Expect = 1.6e-54, Sum P(5) = 1.6e-54
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 1766 SSSKDIIAESAKADVVLDEHGKVQ 1789
S++KD +AE ++A+ DE K++
Sbjct: 1458 SATKDELAELSEAESEGDEKPKLR 1481
Score = 38 (18.4 bits), Expect = 1.2e-53, Sum P(4) = 1.2e-53
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 1687 EIATSCDTASLDDSHD-NGNVEVLCGGTGDKKADCKMEPD 1725
E +S +T +L S + VL TGD+K+ K E D
Sbjct: 2062 ESMSSVETRTLIKSEPVSPKNGVLPQATGDQKSGGKCETD 2101
Score = 37 (18.1 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 528 KRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKS 567
K E E T+E EK + SDS E + S
Sbjct: 2855 KGGTEPSPLNENSTDEGSEKADASSGSDSTSSSSEDSDSS 2894
Score = 37 (18.1 bits), Expect = 3.2e-54, Sum P(5) = 3.2e-54
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 2400 TSEGMGGPSPPLVIAEDKTENEIEEDPVVNSVAVEESKGSEA 2441
T + G S ++TE++ E+ NSV+ S S A
Sbjct: 2739 TEDKKGSDSKESEGKTERTESQSSENGGENSVSSSPSTSSTA 2780
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 636 (228.9 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 178/571 (31%), Positives = 286/571 (50%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ L I+W +++DE HR+KN K L Y+ H+LLLT
Sbjct: 905 KFHVLLTSYELITI--DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 962
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP FN+ E F + F D S + I
Sbjct: 963 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ----------IK 1005
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L S G
Sbjct: 1006 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGN 1065
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLCGKLEMLDRLLPKLKA 256
S+ N +M+L+ CNHPYL + A E L Y +++ GKL +L ++L KLK
Sbjct: 1066 QVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKE 1125
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L ++ Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1126 QGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLL 1185
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHRIGQ V++ RF T +VEE++
Sbjct: 1186 STRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERI 1245
Query: 377 RASAEHKLGVANQSITAGFFDN--NTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXXX 434
A+ K+ + + + G + S ++ + L+ E K+E
Sbjct: 1246 TQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIH 1305
Query: 435 XRSES-------EIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT-DDDL 486
+E+ D + D Q E ++++ K+ + + + + + + ++ ++++
Sbjct: 1306 YDNEAIARLLDRNQDATDDTDVQNMNEYLSSF-KVAQYVVREEDKIEEIEREIIKQEENV 1364
Query: 487 KALYEAMKI---YDAPKTGVSPNVGV-KRKGEHLGALDTQHYGRGKRAREVRSYEEQWTE 542
Y + Y+ + ++ N+G KR + + D + ++ EE+ +
Sbjct: 1365 DPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEE--D 1422
Query: 543 EEFEKMCQAESSDSPKLKEEGLEKSLPTVVS 573
E+F++ + +L+ E +K LP +++
Sbjct: 1423 EDFDERPEGRRQSKRQLRNEK-DKPLPPLLA 1452
Score = 62 (26.9 bits), Expect = 1.9e-56, Sum P(3) = 1.9e-56
Identities = 24/80 (30%), Positives = 32/80 (40%)
Query: 678 SSQPTTAFVPVAP-GSQSASACPSTPMQP----KGRGRRI---QSGEQVPRRRGKKIGLV 729
+S PT P P S + S C S P P KG G R + + P + +K V
Sbjct: 1582 ASSPTKTS-PTTPEASTTNSPCTSKPATPAPSEKGDGVRTLLEKDDTENPEEKPEKSSKV 1640
Query: 730 LPAASDDIPSPGPDPKTNEQ 749
+I SP P P E+
Sbjct: 1641 GEKMETEIDSPSPAPSLGER 1660
Score = 56 (24.8 bits), Expect = 8.0e-56, Sum P(3) = 8.0e-56
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKG 788
+P PDP + + S + +P+ T + + ++ P P + +PS KG
Sbjct: 1565 MPELMPDPSADSKRSSRASSPTKTSPTTPEASTTNSPCTSKPATPAPSE-KG 1615
Score = 53 (23.7 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E+ D + + EE++E D+ P G S+ + + + K P+
Sbjct: 1406 EDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPL 1450
Score = 45 (20.9 bits), Expect = 1.9e-56, Sum P(3) = 1.9e-56
Identities = 31/148 (20%), Positives = 59/148 (39%)
Query: 1972 VLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEK------TEGSEKDPDSSFA 2025
VL +E +++ + D++ +P L I A L E ++G+E P +F
Sbjct: 1882 VLNQLEELLSDM--KADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAFP 1939
Query: 2026 A---QEDPKESVVEAGDQMG-VSLGGATVMEKSSEDLAT-----PPLSLANEEEMIEGFD 2076
P + +G ++ GA + + T PP+ + E+EM+
Sbjct: 1940 PGPYATPPGYGAAFSAAPVGALAAAGANYSQMPAGSFITATTNGPPVLVKKEKEMVGALV 1999
Query: 2077 NDPTGISMAVMDSKECAAEAADQMCVSE 2104
+D G+ D KE A + +C+ +
Sbjct: 2000 SDGLGL-----DRKE--PRAGEVICIDD 2020
Score = 45 (20.9 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 1486 SPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKC 1545
S +S T+ S + + N P +P + +P G + D +E P + E +
Sbjct: 1580 SRASSPTKTSPTTPEASTTNSPCTSKPATPAPSEKGDGVRTLLEKDDTENPEEKPEKSSK 1639
Query: 1546 PSDAIVNNLLETPLDIKSIG 1565
+ + + ++P S+G
Sbjct: 1640 VGEKMETEI-DSPSPAPSLG 1658
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 620 (223.3 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 149/353 (42%), Positives = 201/353 (56%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 609 DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH 668
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F EDF + K E NG S LH+VL PF+LRR+K
Sbjct: 669 FIMPEKFEFWEDFEEDHGKGRE-NGYQS-----------------LHKVLEPFLLRRVKK 710
Query: 158 KVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNSKGRSVHNSVMELRNI 211
VE LP K+E+++R E SA Y K ++ R + L G+ G++ G N VMEL+
Sbjct: 711 DVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG--FLNIVMELKKC 768
Query: 212 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 271
CNH YL + E+ + + L ++R GKL +LD+LL +L+ +RVL FS M R+L
Sbjct: 769 CNHCYLIRA-PEDSERETGQEVLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRML 827
Query: 272 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 331
D++ +YLT K Y + RLDG G R +D FN S F FLLS RAGG+G+NL +AD
Sbjct: 828 DILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD 887
Query: 332 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
TV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++ A+ K+
Sbjct: 888 TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 940
Score = 186 (70.5 bits), Expect = 6.0e-07, Sum P(4) = 6.0e-07
Identities = 64/198 (32%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S+HRLL+T
Sbjct: 595 KFNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 652
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F EDF + K E NG S ++
Sbjct: 653 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS-----LHKVLEPFLLR 706
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L G+ G++ G
Sbjct: 707 RV----KKDVEKSLPAKVEQILRVEMSALQK----QYYKWILTRNYKALAKGTRGSTSG- 757
Query: 200 SVHNSVMELRNICNHPYL 217
N VMEL+ CNH YL
Sbjct: 758 -FLNIVMELKKCCNHCYL 774
Score = 66 (28.3 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 37/134 (27%), Positives = 54/134 (40%)
Query: 1235 TPVSGHT--LASKTEALKPENKAQAGRIEN-IANSSPDDKSLPMVPNLETAPPGFD-IPI 1290
T SG L + +K ENKA + E+ + SSP P E G + P
Sbjct: 1337 TVTSGEEAKLKKRKPRVKKENKAPRLKDEHGLELSSPRHSDNPSEEG-EVKDDGLEKSPT 1395
Query: 1291 EKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTC-SV 1349
+K ++ N+ N +E PVSS + E++K + V D S K+ S
Sbjct: 1396 KKKQKKKENKEN-----KEKPVSSRKDREGDK-EKKKSKDKKEKVKGGDAKSSSKSKRSQ 1449
Query: 1350 TPAMETAPGFDIPI 1363
P TA +PI
Sbjct: 1450 GPVHITAGSEPVPI 1463
Score = 59 (25.8 bits), Expect = 7.6e-55, Sum P(3) = 7.6e-55
Identities = 27/118 (22%), Positives = 49/118 (41%)
Query: 2285 PLSSSDVEEEKIEGFSKPVGS------EKESIASAVPLDESKGPDAEVSSQTAIEGG--- 2335
P ++E E KPV S +KE S ++ KG DA+ SS++ G
Sbjct: 1394 PTKKKQKKKENKENKEKPVSSRKDREGDKEKKKSKDKKEKVKGGDAKSSSKSKRSQGPVH 1453
Query: 2336 ---GVVSIPVPEEADGPASFLAAEEEKNECSDK-EPVGSSVSQIESKEPEAKAFEPMD 2389
G +P+ E+ D +E + C ++ PV ++ Q++ + E ++
Sbjct: 1454 ITAGSEPVPIGEDEDDDLD----QETFSICKERMRPVKKALKQLDKPDKGLNVQEQLE 1507
Score = 54 (24.1 bits), Expect = 3.5e-55, Sum P(2) = 3.5e-55
Identities = 45/185 (24%), Positives = 74/185 (40%)
Query: 1763 ALLSSSKDIIAESAKADVVLDEHGKVQLLPG-ADNP-EGGVIVPEHKSENMGEKDDISSE 1820
A L K + + KA + DEHG P +DNP E G + + ++ +K E
Sbjct: 1344 AKLKKRKPRVKKENKAPRLKDEHGLELSSPRHSDNPSEEGEVKDDGLEKSPTKKKQKKKE 1403
Query: 1821 HAFGSSLVL---QDKASEAEIGDRIDEPQ-VDGFSPRSMSGVVDELVDEAGDHMGVSHSP 1876
+ + +D+ + E D+ + V G +S S + H+ P
Sbjct: 1404 NKENKEKPVSSRKDREGDKEKKKSKDKKEKVKGGDAKSSS---KSKRSQGPVHITAGSEP 1460
Query: 1877 VHVVEREKSEELGLPSLSSATKE----EKIDGSLDKDPDSNLVV---LEDSKG---SIGD 1926
V + E E ++L + S + +K LDK PD L V LE ++ IGD
Sbjct: 1461 VPIGEDE-DDDLDQETFSICKERMRPVKKALKQLDK-PDKGLNVQEQLEHTRSCLLKIGD 1518
Query: 1927 QMDCC 1931
++ C
Sbjct: 1519 RIAEC 1523
Score = 51 (23.0 bits), Expect = 1.6e-52, Sum P(4) = 1.6e-52
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 829 QTKGQSRKTQSGGVTPR--RRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRL---S 883
Q K ++++ + V+ R R G ++ S + G ++KS+ +S+ + G + + S
Sbjct: 1399 QKKKENKENKEKPVSSRKDREGDKEKKKSKDKKEKVKGGDAKSSSKSKRSQGPVHITAGS 1458
Query: 884 KSVSMGKQ--DALSQE 897
+ V +G+ D L QE
Sbjct: 1459 EPVPIGEDEDDDLDQE 1474
Score = 47 (21.6 bits), Expect = 7.6e-55, Sum P(3) = 7.6e-55
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 508 GVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSP----KLKEEG 563
G+++KG + + R R ++ E E + SD+P ++K++G
Sbjct: 1331 GLEKKGTVTSGEEAKLKKRKPRVKKENKAPRLKDEHGLE-LSSPRHSDNPSEEGEVKDDG 1389
Query: 564 LEKSLPT 570
LEKS PT
Sbjct: 1390 LEKS-PT 1395
Score = 47 (21.6 bits), Expect = 6.0e-53, Sum P(4) = 6.0e-53
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 1997 PEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKES 2033
P H D P+ E K +G EK P +++ KE+
Sbjct: 1373 PRHSDNPSEEG--EVKDDGLEKSPTKKKQKKKENKEN 1407
Score = 47 (21.6 bits), Expect = 6.0e-53, Sum P(4) = 6.0e-53
Identities = 19/87 (21%), Positives = 40/87 (45%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
+++ S + + + + +V F+ ++E + D + V E E+ +EL
Sbjct: 1013 ENEVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELE 1072
Query: 1890 ----LPSLSSATKEEKIDGSLDKDPDS 1912
LP + S+TK+ + + S D D +S
Sbjct: 1073 EIYMLPRIRSSTKKAQTNDS-DSDTES 1098
Score = 45 (20.9 bits), Expect = 6.0e-53, Sum P(4) = 6.0e-53
Identities = 18/77 (23%), Positives = 43/77 (55%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENT-SEGMGGP------S 2408
++++N+ + ++PV S + KE + K+ + + V G A ++ S+ GP S
Sbjct: 1400 KKKENKENKEKPVSSRKDREGDKEKK-KSKDKKEKVKGGDAKSSSKSKRSQGPVHITAGS 1458
Query: 2409 PPLVIAEDKTENEIEED 2425
P+ I ED+ +++++++
Sbjct: 1459 EPVPIGEDE-DDDLDQE 1474
Score = 40 (19.1 bits), Expect = 7.3e-53, Sum P(3) = 7.3e-53
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 1943 DFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKE 1978
D + S + + K + +++ PVSS+ EG KE
Sbjct: 1388 DGLEKSPTKKKQKKKENKENKEKPVSSRKDREGDKE 1423
Score = 40 (19.1 bits), Expect = 7.3e-53, Sum P(3) = 7.3e-53
Identities = 16/72 (22%), Positives = 27/72 (37%)
Query: 1075 VKRHG-RKTPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLR 1133
VK G K+PT + ++ K+ P D + + K + G S +
Sbjct: 1385 VKDDGLEKSPTKKKQKKKENKENKEKPVSSRKDREGDKEKKKSKDKKEKVKGGDAKSSSK 1444
Query: 1134 SKQETADVNDVA 1145
SK+ V+ A
Sbjct: 1445 SKRSQGPVHITA 1456
Score = 37 (18.1 bits), Expect = 1.6e-52, Sum P(4) = 1.6e-52
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1072 SVPVKR--HGRKTPTTGEAPRRRGKKQGSGP 1100
S P ++ H K+P +P R +Q + P
Sbjct: 1795 SPPAQKSPHDSKSPLDHRSPLERSLEQKNNP 1825
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 652 (234.6 bits), Expect = 2.2e-56, Sum P(4) = 2.2e-56
Identities = 160/411 (38%), Positives = 227/411 (55%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
+F ++TT+E ++ +L+ I W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 967 RFQAIITTFEMILGGCG--ELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLT 1024
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1025 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF-------GDLKTEEQ----------VQ 1067
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE +L K E ++ E + QK + + E+N + G++
Sbjct: 1068 KLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQT 1127
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTLIPK---HYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL + E++ DT P +L +++ GKL ++D
Sbjct: 1128 NVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLID 1187
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPK+KA H+VL FS M R LD++EDYL K+Y Y R+DG G R A ID+F++ D
Sbjct: 1188 KLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPD 1247
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1248 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVT 1307
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDR--REYLESLLR 414
+ E ++ A KLG+ QS++ D+N S + ++ +E LLR
Sbjct: 1308 RNSYEREMFDRASLKLGLDKAVLQSMSGR--DSNVSGIQQLSKKEIEDLLR 1356
Score = 59 (25.8 bits), Expect = 2.2e-56, Sum P(4) = 2.2e-56
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 1795 DNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPR 1853
D +G V PE+K KDDI + + LV+ D + GD++ P + R
Sbjct: 1725 DYMDGDVEDPEYKPAPAIFKDDIEDDVSSPGDLVIADGEGQLMEGDKVYWPTPSALTTR 1783
Score = 55 (24.4 bits), Expect = 1.4e-55, Sum P(5) = 1.4e-55
Identities = 39/172 (22%), Positives = 69/172 (40%)
Query: 1861 ELVDEAGDHMGVSHSPVHVV----------EREKSEELGLPSLSSATKEEKIDGSLDKDP 1910
+L+ A H GVS + H++ +R ++ S +SA ++ +L P
Sbjct: 1968 DLLIGAAKH-GVSRTDYHILRDPELSFMAAQRNYNQSKAAHSRTSAPLLQQYQVALSASP 2026
Query: 1911 DSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQ 1970
++L L +KG++ + M + S+ SS K + S K+ V SQ
Sbjct: 2027 LTSLPRLLGAKGTLLEDMKVKSESLTEEPQSSEEESMSSMETRTRVKSEPVSPKNGVLSQ 2086
Query: 1971 SVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDS 2022
+ + +E +M ++ E L + PAS P GS+ DS
Sbjct: 2087 ATGDQKSGGKSETDRRM-VAARTEPLTPN---PAS-KKPRVHKRGSQSSSDS 2133
Score = 52 (23.4 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 23/114 (20%), Positives = 51/114 (44%)
Query: 700 STPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSG 759
S P+ PK +G+Q + + ++ A ++ + +P P K + S + S
Sbjct: 2074 SEPVSPKNGVLSQATGDQKSGGKSETDRRMVAARTEPL-TPNPASKKPRVHKRGSQSSSD 2132
Query: 760 GESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATA 813
+S + + SS ++ S S S + S + SS +A +S +++ +++
Sbjct: 2133 SDSDSARSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSS 2186
Score = 50 (22.7 bits), Expect = 2.2e-56, Sum P(4) = 2.2e-56
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 1948 SSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLA 2007
SSS + + SS SS S S+E+ +E Q K + + ASL+
Sbjct: 2165 SSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEDVQKREGTPHRKAYDEESV-ASLS 2223
Query: 2008 TPEEKTEGSEK----DPDSSFAAQ 2027
T +++T+ S + P+S++ Q
Sbjct: 2224 TTQDETQDSFQANNGTPESAYLLQ 2247
Score = 49 (22.3 bits), Expect = 8.2e-53, Sum P(5) = 8.2e-53
Identities = 32/167 (19%), Positives = 68/167 (40%)
Query: 1368 EQSGTEIDAKVKWKNTPL-PGEAIVA---GIEVFKPENKTDGDSVE-KLEDTVDDHSLVK 1422
E+S + ++ + + K+ P+ P +++ G + +++TD V + E + + K
Sbjct: 2060 EESMSSMETRTRVKSEPVSPKNGVLSQATGDQKSGGKSETDRRMVAARTEPLTPNPASKK 2119
Query: 1423 ELIHR--SPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRET 1480
+H+ S SD + + S SS + S G S S + + S
Sbjct: 2120 PRVHKRGSQSSSDSDSDSARSSCSSRSSSSSSSSSSCSHSRSGSS-SSSSSSCSSAS--- 2175
Query: 1481 PILSGSPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAV 1527
S S +S + S+ S ++ + ++V+ +P R +V
Sbjct: 2176 ---SSSSSSSSSSSSSSSSSSEESDSEEDVQKREGTPHRKAYDEESV 2219
Score = 47 (21.6 bits), Expect = 5.5e-54, Sum P(4) = 5.5e-54
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 1191 QSSDDKTCSVTPT---VETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTE 1247
QSS++++ S T V++ P SP G L+ D G + +A++TE
Sbjct: 2056 QSSEEESMSSMETRTRVKSEPV---SPKN--GVLSQATGDQK-SGGKSETDRRMVAARTE 2109
Query: 1248 ALKPENKAQAGRIENIANSSPDD 1270
L P ++ R+ + S D
Sbjct: 2110 PLTPNPASKKPRVHKRGSQSSSD 2132
Score = 47 (21.6 bits), Expect = 9.9e-52, Sum P(6) = 9.9e-52
Identities = 21/115 (18%), Positives = 42/115 (36%)
Query: 1114 NQHSQNKSRDSFGSKTISLRSKQETADVNDVARVMK---EIFSETCSSKAKTGDSSLNEG 1170
+Q S + DS S + S RS ++ + + S +CSS + + SS +
Sbjct: 2127 SQSSSDSDSDSARS-SCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSS 2185
Query: 1171 KDXXXXXXXXXXXXXEVAKKQSS-------DDKTCSVTPTVETPPPGFNSPNENP 1218
+V K++ + ++ S++ T + F + N P
Sbjct: 2186 SSSSSSSSEESDSEEDVQKREGTPHRKAYDEESVASLSTTQDETQDSFQANNGTP 2240
Score = 47 (21.6 bits), Expect = 9.9e-52, Sum P(6) = 9.9e-52
Identities = 33/156 (21%), Positives = 62/156 (39%)
Query: 850 RQALGSPPISDVSAGPESKSNLQSENNSGGL-RLSKSVSMGKQDALSQE-LSNKIQVQPC 907
R + S P+S + G S++ + SGG + + + + L+ S K +V
Sbjct: 2069 RTRVKSEPVSPKN-GVLSQAT--GDQKSGGKSETDRRMVAARTEPLTPNPASKKPRVHKR 2125
Query: 908 GVATSADVAGPDQKPA--EQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVA 965
G +S+D + + +S S+ + + SSS S + A S + +
Sbjct: 2126 GSQSSSDSDSDSARSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSS 2185
Query: 966 SDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQS 1001
S + SE S S+ V + KA + ++ S
Sbjct: 2186 SSSSSSSSEESDSEEDVQKREGTPHRKAYDEESVAS 2221
Score = 47 (21.6 bits), Expect = 9.9e-52, Sum P(6) = 9.9e-52
Identities = 36/160 (22%), Positives = 54/160 (33%)
Query: 748 EQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSA--VAALNSE 805
E+PQS T T V S P +P +S + +SG + VAA
Sbjct: 2053 EEPQSSEEESMSSMETRT--RVKSEPVSPKNGVLSQATGDQKSGGKSETDRRMVAARTEP 2110
Query: 806 LNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGP 865
L N A+ Q+ S + S + R + S S +G
Sbjct: 2111 LTPNPASKKPRVHKRGS------QSSSDS-DSDSARSSCSSRSSSSSSSSSSCSHSRSGS 2163
Query: 866 ESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQ 905
S S+ + S S S S + S+E ++ VQ
Sbjct: 2164 SSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEDVQ 2203
Score = 46 (21.3 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 34/146 (23%), Positives = 61/146 (41%)
Query: 829 QTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSA-------GPESKSNLQSENNS-GGL 880
+ +G+ +T+S +P G+R GSP S +A P + + L N G+
Sbjct: 2738 ELEGKKERTESQ--SPENGGERCVPGSPSTSSTAALSSAAAAKPIALNPLLLSNILYPGM 2795
Query: 881 RLSKSVSMGKQDALSQELSNKIQVQP-----CGVATSADVAGPDQKPAEQSVRVVQSNQP 935
L+ +++ LSQ SN VQ + S ++ + + +Q + P
Sbjct: 2796 LLTPGLNL-HLPTLSQ--SNAFDVQKNKSDDLDSSKSVEIKEENSRVRDQEEKGGTEPSP 2852
Query: 936 INLPATHDSSSQPS-GSTPAQVPSMD 960
+N +T + S + S GS + S D
Sbjct: 2853 LNENSTDEGSERASSGSDSSSSSSED 2878
Score = 42 (19.8 bits), Expect = 2.2e-56, Sum P(4) = 2.2e-56
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R RE+ S ++ Q E + E +C+A
Sbjct: 1504 YGWG-RWREILSHGRFKRQLNEHDVEVICRA 1533
Score = 41 (19.5 bits), Expect = 4.1e-51, Sum P(6) = 4.1e-51
Identities = 28/152 (18%), Positives = 55/152 (36%)
Query: 640 EKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQPT--TAFVPVAPGSQSASA 697
+ D+ + +S+ +S S H G + SS + +A + S S+S+
Sbjct: 2132 DSDSDSARSSCSSRS----SSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSS 2187
Query: 698 CPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNP 757
S+ + +Q E P R+ V ++ + N P+S L
Sbjct: 2188 SSSSSSEESDSEEDVQKREGTPHRKAYDEESVASLSTTQDETQDSFQANNGTPESAYLLQ 2247
Query: 758 SGGESTATDGNVSSIPTAPVPDSVSPSAVKGQ 789
G A+ + + DS+ + +KG+
Sbjct: 2248 GGYMLAASYWPKDRVMINRL-DSICQTVLKGK 2278
Score = 40 (19.1 bits), Expect = 3.2e-53, Sum P(5) = 3.2e-53
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 1505 NHPQNVEPTSASPERSGPQ 1523
N P N PT +P S PQ
Sbjct: 2448 NKPPNHIPTGMNPALSYPQ 2466
Score = 40 (19.1 bits), Expect = 8.2e-53, Sum P(5) = 8.2e-53
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 1938 PENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVL 1973
PEN + C P S A + ++ P++ +L
Sbjct: 2751 PENGGERCVPGSPSTSSTAALSSAAAAKPIALNPLL 2786
Score = 40 (19.1 bits), Expect = 3.1e-52, Sum P(6) = 3.1e-52
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 1200 VTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTP 1236
+ P + P P E+P + K+ + GD P
Sbjct: 2458 MNPALSYPQPQRIPDTESPVPVINLKDGTRLAGDDAP 2494
Score = 39 (18.8 bits), Expect = 1.4e-55, Sum P(5) = 1.4e-55
Identities = 15/76 (19%), Positives = 30/76 (39%)
Query: 2246 SASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGS 2305
S S G S + ++ + + + S S+ + +K EG
Sbjct: 2155 SCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEDVQKREGTPHRKAY 2214
Query: 2306 EKESIAS-AVPLDESK 2320
++ES+AS + DE++
Sbjct: 2215 DEESVASLSTTQDETQ 2230
Score = 39 (18.8 bits), Expect = 1.7e-54, Sum P(4) = 1.7e-54
Identities = 15/67 (22%), Positives = 27/67 (40%)
Query: 886 VSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSS 945
V K D L S +I+ + V + G + P ++ S + + + SS
Sbjct: 2816 VQKNKSDDLDSSKSVEIKEENSRVRDQEEKGGTEPSPLNENSTDEGSERASSGSDSSSSS 2875
Query: 946 SQPSGST 952
S+ S S+
Sbjct: 2876 SEDSDSS 2882
Score = 39 (18.8 bits), Expect = 1.1e-51, Sum P(5) = 1.1e-51
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 1708 VLCGGTGDKKADCKMEPD 1725
VL TGD+K+ K E D
Sbjct: 2083 VLSQATGDQKSGGKSETD 2100
Score = 38 (18.4 bits), Expect = 3.2e-53, Sum P(5) = 3.2e-53
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1960 GSSEKDPVSSQSVLEGSKETVAEAGDQMDIS 1990
G +E P++ S EGS E + D S
Sbjct: 2846 GGTEPSPLNENSTDEGS-ERASSGSDSSSSS 2875
Score = 37 (18.1 bits), Expect = 3.4e-54, Sum P(3) = 3.4e-54
Identities = 15/72 (20%), Positives = 34/72 (47%)
Query: 1850 FSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKD 1909
F S+ +D+ V ++ + S + + +++ E+L A EE+ +GS +
Sbjct: 1316 FDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCE 1375
Query: 1910 PDSNLVVLEDSK 1921
D + ++L +K
Sbjct: 1376 EDIDQILLRRTK 1387
Score = 37 (18.1 bits), Expect = 2.5e-53, Sum P(5) = 2.5e-53
Identities = 30/112 (26%), Positives = 44/112 (39%)
Query: 1416 DDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDV-A 1474
DD ++ E R+ D+ D G+V ED P P I K VS D V A
Sbjct: 1713 DDKAVAAE--QRANDYMD---GDV-----EDPEYKP--APAIFKDDIEDDVSSPGDLVIA 1760
Query: 1475 DHSRETPILSGSPINSGTECS---------TVSVKTDVGNHPQNVEPTSASP 1517
D E ++ G + T + T +T+ H Q ++PT + P
Sbjct: 1761 DG--EGQLMEGDKVYWPTPSALTTRLRRLITAYQRTNKNRHIQQMQPTFSLP 1810
Score = 37 (18.1 bits), Expect = 8.2e-53, Sum P(5) = 8.2e-53
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 2003 PASLATPEEKTEGSEKDPDSSFAAQEDPKES 2033
P + + +E +E + DSS ++ ED S
Sbjct: 2852 PLNENSTDEGSERASSGSDSSSSSSEDSDSS 2882
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 617 (222.3 bits), Expect = 2.8e-56, P = 2.8e-56
Identities = 150/353 (42%), Positives = 201/353 (56%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 604 DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH 663
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F EDF + K E NG S LH+VL PF+LRR+K
Sbjct: 664 FIMPEKFEFWEDFEEDHGKGRE-NGYQS-----------------LHKVLEPFLLRRVKK 705
Query: 158 KVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNSKGRSVHNSVMELRNI 211
VE LP K+E+++R E SA Y K ++ R + L G+ G++ G N VMEL+
Sbjct: 706 DVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG--FLNIVMELKKC 763
Query: 212 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 271
CNH YL + EE + + L ++R GKL +LD+LL +L+ +RVL FS M R+L
Sbjct: 764 CNHCYLIK-PPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRML 822
Query: 272 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 331
D++ +YLT K Y + RLDG G R +D FN S F FLLS RAGG+G+NL +AD
Sbjct: 823 DILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD 882
Query: 332 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
TV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++ A+ K+
Sbjct: 883 TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 935
Score = 186 (70.5 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 64/198 (32%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S+HRLL+T
Sbjct: 590 KFNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 647
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F EDF + K E NG S ++
Sbjct: 648 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS-----LHKVLEPFLLR 701
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L G+ G++ G
Sbjct: 702 RV----KKDVEKSLPAKVEQILRVEMSALQK----QYYKWILTRNYKALAKGTRGSTSG- 752
Query: 200 SVHNSVMELRNICNHPYL 217
N VMEL+ CNH YL
Sbjct: 753 -FLNIVMELKKCCNHCYL 769
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 640 (230.4 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 163/412 (39%), Positives = 221/412 (53%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+V++TT+E ++ D P+L KI W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 569 KFHVVITTFEMILA--DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLT 626
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F + F GD + +
Sbjct: 627 GTPLQNSVEELFSLLNFLEPSQFPSETAFLEEF-------GDLKTEEQ----------VK 669
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + +KG +
Sbjct: 670 KLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--TKGAN 727
Query: 201 VHN------SVMELRNICNHPYLSQLHAEEV--DTL------IPKHYLPPIVRLCGKLEM 246
HN ++MELR CNHPYL E++ D P L +++ GKL +
Sbjct: 728 QHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVL 787
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
+D+LLPKL A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F +
Sbjct: 788 IDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK 847
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 848 PDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL 907
Query: 367 ETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
T + E ++ A KLG+ Q I N + E +E LLR+
Sbjct: 908 ITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKME-VEDLLRK 958
Score = 54 (24.1 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 678 SSQPTTAFVP-VAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLP----- 731
+S P AF P + PG PS + P G G + + +Q R + IGL
Sbjct: 2603 TSSPV-AFNPFLIPGVSPGLIYPSMFLSP-GMGMALPAMQQA--RHSEVIGLESQKRKKK 2658
Query: 732 -AASDDI-PSPGPDPKTNEQPQSESLNP 757
D + P+P P P + ++P S+ P
Sbjct: 2659 KTKGDSLNPNPEPAPGSEKEPGSDQNCP 2686
Score = 53 (23.7 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 518 ALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAES-SDSPKLKEEGLEKSLPT 570
+L++ YG+ ++E S++E + E K A S S+ K + G E +PT
Sbjct: 1707 SLESMMYGKKALSQEPGSFQESPSTIEPRKDALASSASEEGKCQPGGHEAEIPT 1760
Score = 49 (22.3 bits), Expect = 7.9e-55, Sum P(4) = 7.9e-55
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 1709 LCGGTGDKKADC-KMEPDCLVASDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALLSS 1767
LC TG + ++E CL AS S++ G G ++++N+ S LSS
Sbjct: 1793 LCSETGQRPESIGQLEAKCL-ASPSLDQ---------GNESGFVDMYNLSVCDSRRSLSS 1842
Query: 1768 SKDII 1772
+ +I
Sbjct: 1843 DQQLI 1847
Score = 49 (22.3 bits), Expect = 2.9e-53, Sum P(5) = 2.9e-53
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 1564 IGGPI-VSMKAADVADADHPLETAVELGSPVNSCTVE 1599
+GG + M AA + A PL + + G+P TVE
Sbjct: 2534 VGGLLNAPMAAACTSTAPAPLPSTTKSGTPATEKTVE 2570
Score = 45 (20.9 bits), Expect = 7.9e-55, Sum P(4) = 7.9e-55
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 2351 SFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFE-----PMDVVDG-----AVALENT 2400
SFLA K+E + P V + ++K + F P V++G A+ L T
Sbjct: 2164 SFLAPVFTKDEQKHRRPYEFEVER-DAKARSLEQFSATHGHPPIVLNGWHGESAIDLSCT 2222
Query: 2401 SEGMGGPSPPLVIA 2414
SEG G + P ++
Sbjct: 2223 SEGSPGATSPFPVS 2236
Score = 44 (20.5 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 1886 EELGLPSLSSATKEEKI-DGSLDKDPDSNLVVLEDSKGSIGDQMDCCQ 1932
E++G+P S + E+ + DG+ D N+ D + + D++D Q
Sbjct: 1310 EKVGMPDEKSLSAEQGVTDGTSDIPERGNM----DKEDNTEDKLDGLQ 1353
Score = 44 (20.5 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 17/76 (22%), Positives = 33/76 (43%)
Query: 2307 KESIASAVPLDESK----GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNEC 2362
K+++AS+ +E K G +AE+ + + + +G L+ E C
Sbjct: 1736 KDALASSAS-EEGKCQPGGHEAEIPTGPSFMDSLEAGVAQMNIKNGKHLLLSLSREGELC 1794
Query: 2363 SDKEPVGSSVSQIESK 2378
S+ S+ Q+E+K
Sbjct: 1795 SETGQRPESIGQLEAK 1810
Score = 44 (20.5 bits), Expect = 2.9e-53, Sum P(5) = 2.9e-53
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 947 QPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVI 983
+PSG+ P V + G+ +S ++ SE+S S +
Sbjct: 2120 EPSGTLPTPVLTGSAGSRSSLSEPEASEHSFSSSAAL 2156
Score = 41 (19.5 bits), Expect = 9.4e-53, Sum P(4) = 9.4e-53
Identities = 21/103 (20%), Positives = 46/103 (44%)
Query: 878 GGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADV-AGP---DQKPAEQSVRVVQSN 933
G + S S ++DAL+ S + + QP G A++ GP D A + +++
Sbjct: 1723 GSFQESPSTIEPRKDALASSASEEGKCQPGG--HEAEIPTGPSFMDSLEAGVAQMNIKNG 1780
Query: 934 QPINLPATHDSS-SQPSGSTPAQVPSMDLGNVASDTKEVLSEN 975
+ + L + + +G P + ++ +AS + + +E+
Sbjct: 1781 KHLLLSLSREGELCSETGQRPESIGQLEAKCLASPSLDQGNES 1823
Score = 40 (19.1 bits), Expect = 8.3e-55, Sum P(3) = 8.3e-55
Identities = 31/148 (20%), Positives = 54/148 (36%)
Query: 732 AASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVS-SIPTAPVP-DSVSPSAVKGQ 789
AA+ +P P P T ++S P+ E T D S + T + D P Q
Sbjct: 2543 AAACTSTAPAPLPST-----TKSGTPAT-EKTVEDKPSSHDVKTDTLAEDKPGPGPFSDQ 2596
Query: 790 SGTIDPSSAVAALNSELNTNLATAXXXXXXXXX-XXXXXMQTKGQSRKTQSGGVTPRRRG 848
S +S+ A N L ++ + Q+R ++ G+ ++R
Sbjct: 2597 SEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQQARHSEVIGLESQKRK 2656
Query: 849 KRQALGSPPISDVSAGPESKSNLQSENN 876
K++ G + P S+ S+ N
Sbjct: 2657 KKKTKGDSLNPNPEPAPGSEKEPGSDQN 2684
Score = 40 (19.1 bits), Expect = 6.7e-52, Sum P(6) = 6.7e-52
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 838 QSGGVTPRRRGKR---QALGSPPI-SDVSAG 864
+ GG PRRRG+R + L +P I +D +G
Sbjct: 2435 RDGG--PRRRGRRPRSELLKAPAIVADSPSG 2463
Score = 40 (19.1 bits), Expect = 5.5e-51, Sum P(6) = 5.5e-51
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1071 VSVPVKRHGRKTPTTGEAPRRRGKKQGSGPSI 1102
+++P + R + G ++R KK+ G S+
Sbjct: 2634 MALPAMQQARHSEVIGLESQKRKKKKTKGDSL 2665
Score = 39 (18.8 bits), Expect = 6.7e-52, Sum P(6) = 6.7e-52
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 727 GLVLPAASDD---IPS-PGPDPKTNEQPQSESLNPS 758
G P+AS +P+ P P+P Q+E PS
Sbjct: 2320 GQAPPSASHPEGPVPAAPAPEPTPAASSQAEKAIPS 2355
Score = 37 (18.1 bits), Expect = 2.9e-53, Sum P(5) = 2.9e-53
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 2005 SLATPEEKTEGSEKDPDS 2022
SL E GSEK+P S
Sbjct: 2664 SLNPNPEPAPGSEKEPGS 2681
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 640 (230.4 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 163/412 (39%), Positives = 221/412 (53%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+V++TT+E ++ D P+L KI W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 569 KFHVVITTFEMILA--DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLT 626
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F + F GD + +
Sbjct: 627 GTPLQNSVEELFSLLNFLEPSQFPSETAFLEEF-------GDLKTEEQ----------VK 669
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + +KG +
Sbjct: 670 KLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--TKGAN 727
Query: 201 VHN------SVMELRNICNHPYLSQLHAEEV--DTL------IPKHYLPPIVRLCGKLEM 246
HN ++MELR CNHPYL E++ D P L +++ GKL +
Sbjct: 728 QHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVL 787
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
+D+LLPKL A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F +
Sbjct: 788 IDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK 847
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 848 PDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL 907
Query: 367 ETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
T + E ++ A KLG+ Q I N + E +E LLR+
Sbjct: 908 ITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKME-VEDLLRK 958
Score = 54 (24.1 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 678 SSQPTTAFVP-VAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLP----- 731
+S P AF P + PG PS + P G G + + +Q R + IGL
Sbjct: 2603 TSSPV-AFNPFLIPGVSPGLIYPSMFLSP-GMGMALPAMQQA--RHSEVIGLESQKRKKK 2658
Query: 732 -AASDDI-PSPGPDPKTNEQPQSESLNP 757
D + P+P P P + ++P S+ P
Sbjct: 2659 KTKGDSLNPNPEPAPGSEKEPGSDQNCP 2686
Score = 53 (23.7 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 518 ALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAES-SDSPKLKEEGLEKSLPT 570
+L++ YG+ ++E S++E + E K A S S+ K + G E +PT
Sbjct: 1707 SLESMMYGKKALSQEPGSFQESPSTIEPRKDALASSASEEGKCQPGGHEAEIPT 1760
Score = 49 (22.3 bits), Expect = 7.9e-55, Sum P(4) = 7.9e-55
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 1709 LCGGTGDKKADC-KMEPDCLVASDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALLSS 1767
LC TG + ++E CL AS S++ G G ++++N+ S LSS
Sbjct: 1793 LCSETGQRPESIGQLEAKCL-ASPSLDQ---------GNESGFVDMYNLSVCDSRRSLSS 1842
Query: 1768 SKDII 1772
+ +I
Sbjct: 1843 DQQLI 1847
Score = 49 (22.3 bits), Expect = 2.9e-53, Sum P(5) = 2.9e-53
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 1564 IGGPI-VSMKAADVADADHPLETAVELGSPVNSCTVE 1599
+GG + M AA + A PL + + G+P TVE
Sbjct: 2534 VGGLLNAPMAAACTSTAPAPLPSTTKSGTPATEKTVE 2570
Score = 45 (20.9 bits), Expect = 7.9e-55, Sum P(4) = 7.9e-55
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 2351 SFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFE-----PMDVVDG-----AVALENT 2400
SFLA K+E + P V + ++K + F P V++G A+ L T
Sbjct: 2164 SFLAPVFTKDEQKHRRPYEFEVER-DAKARSLEQFSATHGHPPIVLNGWHGESAIDLSCT 2222
Query: 2401 SEGMGGPSPPLVIA 2414
SEG G + P ++
Sbjct: 2223 SEGSPGATSPFPVS 2236
Score = 44 (20.5 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 1886 EELGLPSLSSATKEEKI-DGSLDKDPDSNLVVLEDSKGSIGDQMDCCQ 1932
E++G+P S + E+ + DG+ D N+ D + + D++D Q
Sbjct: 1310 EKVGMPDEKSLSAEQGVTDGTSDIPERGNM----DKEDNTEDKLDGLQ 1353
Score = 44 (20.5 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 17/76 (22%), Positives = 33/76 (43%)
Query: 2307 KESIASAVPLDESK----GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNEC 2362
K+++AS+ +E K G +AE+ + + + +G L+ E C
Sbjct: 1736 KDALASSAS-EEGKCQPGGHEAEIPTGPSFMDSLEAGVAQMNIKNGKHLLLSLSREGELC 1794
Query: 2363 SDKEPVGSSVSQIESK 2378
S+ S+ Q+E+K
Sbjct: 1795 SETGQRPESIGQLEAK 1810
Score = 44 (20.5 bits), Expect = 2.9e-53, Sum P(5) = 2.9e-53
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 947 QPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVI 983
+PSG+ P V + G+ +S ++ SE+S S +
Sbjct: 2120 EPSGTLPTPVLTGSAGSRSSLSEPEASEHSFSSSAAL 2156
Score = 41 (19.5 bits), Expect = 9.4e-53, Sum P(4) = 9.4e-53
Identities = 21/103 (20%), Positives = 46/103 (44%)
Query: 878 GGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADV-AGP---DQKPAEQSVRVVQSN 933
G + S S ++DAL+ S + + QP G A++ GP D A + +++
Sbjct: 1723 GSFQESPSTIEPRKDALASSASEEGKCQPGG--HEAEIPTGPSFMDSLEAGVAQMNIKNG 1780
Query: 934 QPINLPATHDSS-SQPSGSTPAQVPSMDLGNVASDTKEVLSEN 975
+ + L + + +G P + ++ +AS + + +E+
Sbjct: 1781 KHLLLSLSREGELCSETGQRPESIGQLEAKCLASPSLDQGNES 1823
Score = 40 (19.1 bits), Expect = 8.3e-55, Sum P(3) = 8.3e-55
Identities = 31/148 (20%), Positives = 54/148 (36%)
Query: 732 AASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVS-SIPTAPVP-DSVSPSAVKGQ 789
AA+ +P P P T ++S P+ E T D S + T + D P Q
Sbjct: 2543 AAACTSTAPAPLPST-----TKSGTPAT-EKTVEDKPSSHDVKTDTLAEDKPGPGPFSDQ 2596
Query: 790 SGTIDPSSAVAALNSELNTNLATAXXXXXXXXX-XXXXXMQTKGQSRKTQSGGVTPRRRG 848
S +S+ A N L ++ + Q+R ++ G+ ++R
Sbjct: 2597 SEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQQARHSEVIGLESQKRK 2656
Query: 849 KRQALGSPPISDVSAGPESKSNLQSENN 876
K++ G + P S+ S+ N
Sbjct: 2657 KKKTKGDSLNPNPEPAPGSEKEPGSDQN 2684
Score = 40 (19.1 bits), Expect = 6.7e-52, Sum P(6) = 6.7e-52
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 838 QSGGVTPRRRGKR---QALGSPPI-SDVSAG 864
+ GG PRRRG+R + L +P I +D +G
Sbjct: 2435 RDGG--PRRRGRRPRSELLKAPAIVADSPSG 2463
Score = 40 (19.1 bits), Expect = 5.5e-51, Sum P(6) = 5.5e-51
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1071 VSVPVKRHGRKTPTTGEAPRRRGKKQGSGPSI 1102
+++P + R + G ++R KK+ G S+
Sbjct: 2634 MALPAMQQARHSEVIGLESQKRKKKKTKGDSL 2665
Score = 39 (18.8 bits), Expect = 6.7e-52, Sum P(6) = 6.7e-52
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 727 GLVLPAASDD---IPS-PGPDPKTNEQPQSESLNPS 758
G P+AS +P+ P P+P Q+E PS
Sbjct: 2320 GQAPPSASHPEGPVPAAPAPEPTPAASSQAEKAIPS 2355
Score = 37 (18.1 bits), Expect = 2.9e-53, Sum P(5) = 2.9e-53
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 2005 SLATPEEKTEGSEKDPDS 2022
SL E GSEK+P S
Sbjct: 2664 SLNPNPEPAPGSEKEPGS 2681
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 643 (231.4 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 155/408 (37%), Positives = 226/408 (55%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++ +K V KF+VLLT+YE + D+ L I+W +++DE HR+KN K L
Sbjct: 754 VFRMKKEVQIKFHVLLTSYELITI--DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 811
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
Y+ ++LLLTGTP FN+ E F + F D S +
Sbjct: 812 YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ-- 862
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVE 187
I +LH +L P +LRRLK V +P K E +VR E S Y K ++ R
Sbjct: 863 --------IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 914
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEM 246
E L S G S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +
Sbjct: 915 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 974
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN
Sbjct: 975 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1034
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
+ F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF
Sbjct: 1035 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1094
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
T +VEE++ A+ K+ + + + G + S ++ L+ +L+
Sbjct: 1095 VTRASVEERITQVAKRKMMLTHLVVRPGL--GSKSGSMTKQELDDILK 1140
Score = 47 (21.6 bits), Expect = 3.5e-55, Sum P(4) = 3.5e-55
Identities = 15/74 (20%), Positives = 31/74 (41%)
Query: 1401 NKTDGDSVEKLEDTVDD--HSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIM 1458
++ +G+ ++ D + ++E+ P ++ GN + SK PL +
Sbjct: 1493 DRVEGEDKQESSDGKERAREERLEEMEKAQPSPEQLLKGNFISHVLLLISKRSRNVPLSV 1552
Query: 1459 KSTEGPSVSMKADD 1472
T GP KA++
Sbjct: 1553 SRTPGPRDDTKAEE 1566
Score = 45 (20.9 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 2003 PASLATPEEKTEGSEKDP--DSSFAAQEDPKESVVEA 2037
PA+L T ++ EG +K D A+E+ E + +A
Sbjct: 1485 PAALPTALDRVEGEDKQESSDGKERAREERLEEMEKA 1521
Score = 45 (20.9 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 1395 EVFKPENKTDGDSVEKLEDTVDDHSLVKELIHRSPDHSD 1433
E+FK + + D VE D + + +L+ R+ D +D
Sbjct: 1145 ELFKDDVEGDNKDVEDSSVIHYDDAAISKLLDRNQDATD 1183
Score = 45 (20.9 bits), Expect = 3.5e-55, Sum P(4) = 3.5e-55
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 747 NEQPQSESLNPSGGESTATDGNVSSIPTAPVPDS 780
N + + L P G E +SS P PVP S
Sbjct: 1421 NGKYSTPDLIPEGPEGKKPGEVISSDPNTPVPAS 1454
Score = 45 (20.9 bits), Expect = 3.5e-55, Sum P(4) = 3.5e-55
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 522 QHYGRGKRAREVRSY-----EEQWTEEEFEKMCQAESSDSPKLKEEGLEKS 567
++ G+GKR R+ +Y E+Q + E+ + E D + E G +S
Sbjct: 1246 RNLGKGKRIRKQVNYNDASQEDQDNQSEYSIGSEDEDEDFEERPEGGRRQS 1296
Score = 41 (19.5 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 513 GEHLGALDTQ-HYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLK 560
GE AL T G+ +E +E+ EE E+M +A+ S LK
Sbjct: 1482 GEGPAALPTALDRVEGEDKQESSDGKERAREERLEEMEKAQPSPEQLLK 1530
Score = 41 (19.5 bits), Expect = 9.0e-55, Sum P(4) = 9.0e-55
Identities = 29/135 (21%), Positives = 52/135 (38%)
Query: 437 SESEIDV-FESVDKQRREEEMATWRKLIRGLGTDGE-PLPPLPSRLVTDDDLKALYEAMK 494
++SE + E D+ E R+ R L +D + PLPPL +R+ + ++ +
Sbjct: 1270 NQSEYSIGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQR 1329
Query: 495 ---IYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQA 551
+ + G+ P H D RGK +E R+Y + E
Sbjct: 1330 KAFLNAIMRWGMPPQDAFN---SHWLVRDL----RGKSEKEFRAYVSLFMRHLCEPGADG 1382
Query: 552 ESSDSPKLKEEGLEK 566
+ + + EGL +
Sbjct: 1383 AETFADGVPREGLSR 1397
Score = 40 (19.1 bits), Expect = 4.2e-55, Sum P(3) = 4.2e-55
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSE-KDPDSSFAAQEDPKESV 2034
+S++ +K+ E + +TP+ EG E K P ++ DP V
Sbjct: 1407 MSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPGEVISS--DPNTPV 1451
Score = 39 (18.8 bits), Expect = 5.4e-55, Sum P(3) = 5.4e-55
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSS-VSQIESKEPEAKAFEPM 2388
E+ D + + E+++E ++ P G S+ + K K P+
Sbjct: 1266 EDQDNQSEYSIGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPL 1311
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 639 (230.0 bits), Expect = 3.1e-56, Sum P(2) = 3.1e-56
Identities = 163/412 (39%), Positives = 221/412 (53%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+V++TT+E ++ D P+L KI W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 569 KFHVVITTFEMILA--DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLT 626
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F + F GD + +
Sbjct: 627 GTPLQNSVEELFSLLNFLEPSQFPSETAFLEEF-------GDLKTEEQ----------VK 669
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + +KG +
Sbjct: 670 KLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--TKGAN 727
Query: 201 VHN------SVMELRNICNHPYLSQLHAEEV--DTL------IPKHYLPPIVRLCGKLEM 246
HN ++MELR CNHPYL E++ D P L +++ GKL +
Sbjct: 728 QHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVL 787
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
+D+LLPKL A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F +
Sbjct: 788 IDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK 847
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 848 PDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL 907
Query: 367 ETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
T + E ++ A KLG+ Q I N + E +E LLR+
Sbjct: 908 ITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKME-VEDLLRK 958
Score = 59 (25.8 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 31/137 (22%), Positives = 57/137 (41%)
Query: 2258 PDAEANNII----DAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSK-P---VGSEKES 2309
PD N I D + +P+ L + V ++ F + P S K+
Sbjct: 1675 PDVTCENFISKVQDVISINHDESLLPESLESMMYGKKVLSQEPSSFQESPSTNTESRKDV 1734
Query: 2310 IASAVPLD---ESKGPDAEVSS----QTAIEGGGVVSIPVPEEADGPASFLAAEEEKNEC 2362
I ++ D +S GP+AE++S ++E GGV + +G ++ +E C
Sbjct: 1735 ITISISKDGNCQSGGPEAEIASGPTFMGSLEAGGVAQANIK---NGKHLLMSISKEGELC 1791
Query: 2363 -SDKEPVGSSVSQIESK 2378
S+ ++ Q+E+K
Sbjct: 1792 CSEAGQRPENIGQLEAK 1808
Score = 50 (22.7 bits), Expect = 3.1e-56, Sum P(2) = 3.1e-56
Identities = 29/160 (18%), Positives = 54/160 (33%)
Query: 718 VPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPV 777
VP+ G GL+ P + S P ++ ++ E + +V + A
Sbjct: 2528 VPQMFGVG-GLLSPPMATTCTSTAPASLSSTTKSGTAVTEKTAEDKPSSHDVKTDTLAE- 2585
Query: 778 PDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXXXXX-XXXXXMQTKGQSRK 836
D P QS +S+ A N L ++ + Q+R
Sbjct: 2586 -DKPGPGPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQQARH 2644
Query: 837 TQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENN 876
++ G+ ++R K++ G P S P + + N
Sbjct: 2645 SEIVGLESQKRKKKKTKGDNPNSHPEPAPSCEREPSGDEN 2684
Score = 49 (22.3 bits), Expect = 3.6e-53, Sum P(4) = 3.6e-53
Identities = 27/107 (25%), Positives = 45/107 (42%)
Query: 1424 LIHRSPDHSDMVI-GNVPGNTS-EDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETP 1481
+I+R + +V+ G P + E S +P TP ++ S+ G S+ + A+HS
Sbjct: 2097 IINRLDNICHVVLKGKWPSSQQYEPSGTLP--TP-VLTSSAGSRTSLSEPEAAEHSFSNG 2153
Query: 1482 ILSGSPINSGTECSTVSVKTDVGNH--PQNVEPTSASPERSGPQNSA 1526
+ I+ + + V K D H P E + R Q SA
Sbjct: 2154 AALAAQIHKESFLAPVFTK-DEQKHRRPYEFEVERDAKARGLEQFSA 2199
Score = 48 (22.0 bits), Expect = 5.7e-54, Sum P(3) = 5.7e-54
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 947 QPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVI 983
+PSG+ P V + G+ S ++ +E+S S G +
Sbjct: 2120 EPSGTLPTPVLTSSAGSRTSLSEPEAAEHSFSNGAAL 2156
Score = 46 (21.3 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 32/126 (25%), Positives = 51/126 (40%)
Query: 863 AGPESKSNLQS--ENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSAD-VAGPD 919
+G ++ NL + NS +L +S++ + S+ L N+ + V + D ++ PD
Sbjct: 1621 SGTQAPGNLCCLYQTNS---KLYESLTYSQMSRTSESLENEPE-NLVRVESRDDHLSLPD 1676
Query: 920 QKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSK 979
E + VQ IN HD S P L S +E S N+ S+
Sbjct: 1677 VT-CENFISKVQDVISIN----HDESLLPESLESMMYGKKVLSQEPSSFQESPSTNTESR 1731
Query: 980 GGVIPI 985
VI I
Sbjct: 1732 KDVITI 1737
Score = 45 (20.9 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 2254 ESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASA 2313
E + + E N+ A G G P+ L L ++++ EK +GF +A+
Sbjct: 1867 EEEEEENEEENLAMAVGMGER----PEVLHLTEPTTNISREKNQGFQDETKKGSLEVANQ 1922
Query: 2314 VP 2315
P
Sbjct: 1923 TP 1924
Score = 45 (20.9 bits), Expect = 5.8e-53, Sum P(4) = 5.8e-53
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 1506 HPQNVEPTSASPERSGPQNSAVGFCDKSEIPS 1537
HP+ P +++PE P +A +KS IPS
Sbjct: 2328 HPEGPGPATSAPE---PATAASSQAEKS-IPS 2355
Score = 43 (20.2 bits), Expect = 7.4e-53, Sum P(4) = 7.4e-53
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 956 VPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQ---SFEEKACTNASK 1012
+P + N S ++V+S N ++P +L +M ++V Q SF+E TN
Sbjct: 1674 LPDVTCENFISKVQDVISINHDES--LLPE-SLESMMYGKKVLSQEPSSFQESPSTNTES 1730
Query: 1013 SK 1014
K
Sbjct: 1731 RK 1732
Score = 42 (19.8 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 2005 SLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSL--GGATVMEKSSED 2057
SL+ + T+G+ P+ +ED E V+ + S GG V + +D
Sbjct: 1319 SLSAEQGVTDGTSDIPERGNTDKEDNAEDKVDGLQKQTESSSDGGDGVFSEKKDD 1373
Score = 40 (19.1 bits), Expect = 1.1e-53, Sum P(4) = 1.1e-53
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 1886 EELGLPSLSSATKEEKI-DGSLDKDPDSNLVVLEDSKGSIGDQMDCCQ 1932
E++G+P S + E+ + DG+ D N D + + D++D Q
Sbjct: 1310 EKVGMPDEKSLSAEQGVTDGTSDIPERGNT----DKEDNAEDKVDGLQ 1353
Score = 38 (18.4 bits), Expect = 5.7e-54, Sum P(3) = 5.7e-54
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 1071 VSVPVKRHGRKTPTTG-EAPRRRGKK-QGSGPS 1101
+++P + R + G E+ +R+ KK +G P+
Sbjct: 2634 MALPAMQQARHSEIVGLESQKRKKKKTKGDNPN 2666
Score = 38 (18.4 bits), Expect = 1.1e-53, Sum P(4) = 1.1e-53
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 2010 EEKTEGSEKDPDSSFAAQEDPKESVVEAGD 2039
+++TE S D F+ ++D + + D
Sbjct: 1353 QKQTESSSDGGDGVFSEKKDDSRAAQDGSD 1382
Score = 38 (18.4 bits), Expect = 8.1e-53, Sum P(3) = 8.1e-53
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 844 PRRRGKR---QALGSPPI-SDVSAG 864
PRRRG+R + L +P I +D +G
Sbjct: 2439 PRRRGRRPRSELLKAPSIVADSPSG 2463
Score = 37 (18.1 bits), Expect = 3.6e-53, Sum P(4) = 3.6e-53
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1633 KTDDVADHPVEPPGCDK 1649
K D+ HP P C++
Sbjct: 2661 KGDNPNSHPEPAPSCER 2677
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 643 (231.4 bits), Expect = 4.3e-56, Sum P(3) = 4.3e-56
Identities = 155/408 (37%), Positives = 226/408 (55%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++ +K V KF+VLLT+YE + D+ L I+W +++DE HR+KN K L
Sbjct: 671 VFRMKKEVQIKFHVLLTSYELITI--DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 728
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
Y+ ++LLLTGTP FN+ E F + F D S +
Sbjct: 729 YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ-- 779
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVE 187
I +LH +L P +LRRLK V +P K E +VR E S Y K ++ R
Sbjct: 780 --------IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 831
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEM 246
E L S G S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +
Sbjct: 832 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 891
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN
Sbjct: 892 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 951
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
+ F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF
Sbjct: 952 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1011
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
T +VEE++ A+ K+ + + + G + S ++ L+ +L+
Sbjct: 1012 VTRASVEERITQVAKRKMMLTHLVVRPGL--GSKSGSMTKQELDDILK 1057
Score = 49 (22.3 bits), Expect = 4.3e-56, Sum P(3) = 4.3e-56
Identities = 33/146 (22%), Positives = 59/146 (40%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSE-KDPDSSFAAQEDPKESVVEA---------G 2038
+S++ +K+ E + +TP+ EG E K P ++ DP V + G
Sbjct: 1370 MSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPSEVISS--DPNTPVPASPAHLLPAPLG 1427
Query: 2039 --DQMGVSLGGATVMEKSSEDLATPP--LSLANEEEMIEGFDNDPTGISMAVMDSKECAA 2094
D+M LG E + PP +L + +EG D + ++ E A
Sbjct: 1428 LPDKMEAQLGYMDEKELGVQKPKKPPEIQALPTALDRVEGEDKHESSDGKERLEETEKAP 1487
Query: 2095 EAADQMCVSEGCVVVTEKLSEDLGLN 2120
+ +Q+ E + EK+ + L L+
Sbjct: 1488 PSPEQL-PKEEMLPEKEKILDKLELS 1512
Score = 46 (21.3 bits), Expect = 5.2e-54, Sum P(4) = 5.2e-54
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 747 NEQPQSESLNPSGGESTATDGNVSSIPTAPVPDS 780
N + + L P G E +SS P PVP S
Sbjct: 1384 NGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPAS 1417
Score = 45 (20.9 bits), Expect = 4.3e-56, Sum P(3) = 4.3e-56
Identities = 28/126 (22%), Positives = 49/126 (38%)
Query: 445 ESVDKQRREEEMATWRKLIRGLGTDGE-PLPPLPSRLVTDDDLKALYEAMK---IYDAPK 500
E D + R E + R+ R L +D + PLPPL +R+ + ++ + + +
Sbjct: 1242 EDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMR 1301
Query: 501 TGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLK 560
G+ P H D RGK +E R+Y + E + + +
Sbjct: 1302 WGMPPQDAFN---SHWLVRDL----RGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVP 1354
Query: 561 EEGLEK 566
EGL +
Sbjct: 1355 REGLSR 1360
Score = 42 (19.8 bits), Expect = 2.5e-54, Sum P(4) = 2.5e-54
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 522 QHYGRGKRAREVRSY------EEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
++ G+GKR R+ +Y +++W +E + Q+E S + ++E E+
Sbjct: 1200 RNLGKGKRIRKQVNYNDASQEDQEWQDELSDN--QSEYSIGSEDEDEDFEE 1248
Score = 37 (18.1 bits), Expect = 7.0e-56, Sum P(2) = 7.0e-56
Identities = 8/45 (17%), Positives = 23/45 (51%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E +D + + E+++E ++ P G S + ++ ++ +P+
Sbjct: 1227 ELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPL 1271
Score = 37 (18.1 bits), Expect = 2.5e-54, Sum P(4) = 2.5e-54
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 704 QPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDI 737
+P+G+ R QS Q+ R K + +L +I
Sbjct: 1249 RPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNI 1282
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 638 (229.6 bits), Expect = 5.1e-56, Sum P(3) = 5.1e-56
Identities = 154/408 (37%), Positives = 225/408 (55%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++ +K KF+VLLT+YE + D+ L I+W +++DE HR+KN K L
Sbjct: 740 VFRMKKEAQIKFHVLLTSYELITI--DQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNS 797
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
Y+ ++LLLTGTP FN+ E F + F D S +
Sbjct: 798 YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ-- 848
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVE 187
I +LH +L P +LRRLK V +P K E +VR E S Y K ++ R
Sbjct: 849 --------IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 900
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLCGKLEM 246
E L S G S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +
Sbjct: 901 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLML 960
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN
Sbjct: 961 LQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1020
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
+ F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF
Sbjct: 1021 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1080
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
T +VEE++ A+ K+ + + + G + S ++ L+ +L+
Sbjct: 1081 VTRASVEERITQVAKRKMMLTHLVVRPGL--GSKSGSMTKQELDDILK 1126
Score = 56 (24.8 bits), Expect = 5.1e-56, Sum P(3) = 5.1e-56
Identities = 21/85 (24%), Positives = 34/85 (40%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGA 2048
+S++ +K+ E + +TP+ EG E S + DP V G
Sbjct: 1404 MSLVRKKVQEFEHVNGKYSTPDMILEGPESKKCSEMVSS-DPNTPV--PASPAHTHAGPL 1460
Query: 2049 TVMEKSSEDLATPPLSLANEEEMIE 2073
+ EK A PPL E++ +E
Sbjct: 1461 ALAEK-----ADPPLGFQEEKDQVE 1480
Score = 49 (22.3 bits), Expect = 2.3e-54, Sum P(4) = 2.3e-54
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 1880 VEREKSEEL-GLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSG 1934
++ EK EE G+ A ++ + + S K D + ED+K +Q + Q+G
Sbjct: 1550 LKEEKQEENEGIQEKEKALEKPESNSSPGKGEDKEVKPAEDTKVEEKEQSETQQNG 1605
Score = 49 (22.3 bits), Expect = 2.3e-54, Sum P(4) = 2.3e-54
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 1247 EALKPENKAQAGRIENI--ANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPE 1304
E LK E + + I+ A P+ S P + P D +E+ EQS Q N +
Sbjct: 1548 EKLKEEKQEENEGIQEKEKALEKPESNSSPGKGEDKEVKPAEDTKVEE-KEQSETQQNGD 1606
Query: 1305 VKGEE 1309
K EE
Sbjct: 1607 -KEEE 1610
Score = 48 (22.0 bits), Expect = 3.0e-54, Sum P(4) = 3.0e-54
Identities = 21/87 (24%), Positives = 29/87 (33%)
Query: 1146 RVMKEIFSETCSSKAKTGDSSL--NEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVTPT 1203
+V E + E C SK K + NEG K + + K T
Sbjct: 1534 KVESEEYQENCESKEKLKEEKQEENEGIQEKEKALEKPESNSSPGKGEDKEVKPAEDTK- 1592
Query: 1204 VETPPPGFNSPNENPGELTGTKNDASV 1230
VE N + E G K+D +V
Sbjct: 1593 VEEKEQSETQQNGDKEEEDGKKDDRNV 1619
Score = 46 (21.3 bits), Expect = 5.7e-55, Sum P(3) = 5.7e-55
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 538 EQWTEEEFEKMCQA-ESSDSPKLKE-EGL---EKSLPTVVSSSAP 577
E+ EE+++ C++ E K +E EG+ EK+L S+S+P
Sbjct: 1533 EKVESEEYQENCESKEKLKEEKQEENEGIQEKEKALEKPESNSSP 1577
Score = 42 (19.8 bits), Expect = 5.1e-56, Sum P(3) = 5.1e-56
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 522 QHYGRGKRAREVRSY------EEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
++ G+GKR R+ +Y +++W +E + Q+E S + ++E E+
Sbjct: 1236 RNLGKGKRIRKQVNYNDASQEDQEWQDELSDN--QSEYSIGSEDEDEDFEE 1284
Score = 42 (19.8 bits), Expect = 5.7e-55, Sum P(3) = 5.7e-55
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 731 PAASDDIP-SPGPDPKTNEQPQSESLNPSGGESTATDG 767
P +D P D K E+ QSE+ G+ DG
Sbjct: 1577 PGKGEDKEVKPAEDTKVEEKEQSET--QQNGDKEEEDG 1612
Score = 42 (19.8 bits), Expect = 2.3e-54, Sum P(4) = 2.3e-54
Identities = 11/22 (50%), Positives = 11/22 (50%)
Query: 759 GGESTATDGNVSSIPTAPVPDS 780
G ES VSS P PVP S
Sbjct: 1430 GPESKKCSEMVSSDPNTPVPAS 1451
Score = 41 (19.5 bits), Expect = 3.0e-54, Sum P(4) = 3.0e-54
Identities = 29/135 (21%), Positives = 52/135 (38%)
Query: 437 SESEIDV-FESVDKQRREEEMATWRKLIRGLGTDGE-PLPPLPSRLVTDDDLKALYEAMK 494
++SE + E D+ E R+ R L +D + PLPPL +R+ + ++ +
Sbjct: 1267 NQSEYSIGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQR 1326
Query: 495 ---IYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQA 551
+ + G+ P H D RGK +E R+Y + E
Sbjct: 1327 KAFLNAIMRWGMPPQDAFN---SHWLVRDL----RGKSEKEFRAYVSLFMRHLCEPGADG 1379
Query: 552 ESSDSPKLKEEGLEK 566
+ + + EGL +
Sbjct: 1380 AETFADGVPREGLSR 1394
Score = 38 (18.4 bits), Expect = 3.2e-53, Sum P(4) = 3.2e-53
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 1993 PEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVV 2035
P L E D P +++ E + S DP +V+
Sbjct: 1459 PLALAEKADPPLGFQEEKDQVEQKSRRASDSQVGSHDPVPTVL 1501
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 653 (234.9 bits), Expect = 5.7e-56, Sum P(4) = 5.7e-56
Identities = 160/411 (38%), Positives = 227/411 (55%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
+F ++TT+E ++ +L+ I+W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 967 RFQAIITTFEMILGGCG--ELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLT 1024
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1025 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF-------GDLKTEEQ----------VQ 1067
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 1068 KLQAILKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQT 1127
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTLIPK---HYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL + E++ DT P +L +++ GKL ++D
Sbjct: 1128 NVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYNPSASDFHLQAMIQSAGKLVLID 1187
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPK+KA H+VL FS M R LD++EDYL K+Y Y R+DG G R A ID+F++ D
Sbjct: 1188 KLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPD 1247
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1248 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVT 1307
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDR--REYLESLLR 414
+ E ++ A KLG+ QS++ D+N S + ++ +E LLR
Sbjct: 1308 RNSYEREMFDRASLKLGLDKAVLQSMSGR--DSNVSGIQQLSKKEIEDLLR 1356
Score = 68 (29.0 bits), Expect = 3.4e-55, Sum P(5) = 3.4e-55
Identities = 65/281 (23%), Positives = 113/281 (40%)
Query: 705 PKGRGRRIQSGEQVPR---RRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGE 761
P+ RI +G V RRG++ +P A+ +PG N + L P G +
Sbjct: 2601 PESMYERILTGPVVREEVSRRGRRPKSGVPKATIAAAAPGSSGPGNPL-LANGLLP-GVD 2658
Query: 762 STATDG---NVSSIPTAPVPDSVS--PSAVK--GQSGTID---PS--SAVAALNSELNTN 809
TA N+ ++ + V + P+ + G++ T+ P S +A L + L
Sbjct: 2659 LTALQALQQNLQNLQSLHVTAGLMGMPAGLSSGGEAKTMAAMFPMLFSGMAGLPNLLGMG 2718
Query: 810 -LATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAG--PE 866
L + + +G+ +T+S +P G+R GSP S +A P
Sbjct: 2719 GLLSKTAESGAEGKKGNDSKELEGKKERTESQ--SPENGGERCVPGSPSTSSTAAATKPL 2776
Query: 867 SKSNLQSENNS-GGLRLSKSVSMGKQDALSQELSNKIQVQP-----CGVATSADVAGPDQ 920
+ + L N G+ L+ +++ ALSQ SN VQ + S ++ D
Sbjct: 2777 ALNPLLLSNMLYPGMLLTPGLNL-HLPALSQ--SNTFDVQKNKSSDLESSKSVEIKEEDS 2833
Query: 921 KPAEQSVRVVQSNQPINLPATHDSSSQPS-GSTPAQVPSMD 960
+ +Q + P+N +T + S + S GS + S D
Sbjct: 2834 RGRDQEEKGGTEPSPLNENSTDEGSERASSGSDSSSSSSED 2874
Score = 58 (25.5 bits), Expect = 5.7e-56, Sum P(4) = 5.7e-56
Identities = 41/173 (23%), Positives = 70/173 (40%)
Query: 833 QSRKTQS-GGVTPRRRGKRQALGSPPISDVSAGP-ESKSNLQSENNSGGLRLSKSVSMGK 890
QS + +S + R R K + + SP +S P E KS +SE + + V+
Sbjct: 2058 QSSEEESMSSMETRTRVKSEPV-SPKNGVLSQAPGEQKSGGKSETDR------RMVAART 2110
Query: 891 QDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSG 950
+ S K +V G +S+D + D + + S R S+ + + SS S
Sbjct: 2111 EPLTPNPASKKQRVHKRGSESSSD-SDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSS 2169
Query: 951 ST--PAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQS 1001
S+ A S + +S + SE S S+ V + KA + ++ S
Sbjct: 2170 SSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEVQKREGTPHAKAYDEESVAS 2222
Score = 55 (24.4 bits), Expect = 2.5e-53, Sum P(5) = 2.5e-53
Identities = 40/222 (18%), Positives = 82/222 (36%)
Query: 1301 NNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTP---AMETAP 1357
++P + G + P+ + +E+ +E ++ ++ + + K+ V+P + AP
Sbjct: 2031 SSPRLLGAKGPLVEDVRVKSESLAEEPQSSEEESMSSMETRTRVKSEPVSPKNGVLSQAP 2090
Query: 1358 GFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDD 1417
G +K +S T+ V + PL V K +++ DS D+ +
Sbjct: 2091 GE----QKSGGKSETD-RRMVAARTEPLTPNPASKKQRVHKRGSESSSDS-----DSDSE 2140
Query: 1418 HSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHS 1477
S S S ++S SS + S+ S S + + +D
Sbjct: 2141 RSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSE 2200
Query: 1478 RETPILSGSP-INSGTECSTVSVKTDVGNHPQNVEPTSASPE 1518
E G+P + E S S+ + + ++ +PE
Sbjct: 2201 EEVQKREGTPHAKAYDEESVASLSATQDETQDSFQASNGAPE 2242
Score = 55 (24.4 bits), Expect = 3.1e-53, Sum P(5) = 3.1e-53
Identities = 50/214 (23%), Positives = 83/214 (38%)
Query: 1807 KSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEA 1866
KSE++ E+ SSE ++ S E R+ V SP++ GV+ + E
Sbjct: 2049 KSESLAEEPQ-SSE---------EESMSSMETRTRVKSEPV---SPKN--GVLSQAPGEQ 2093
Query: 1867 GDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKI-----DGSLDKDPDSNLVVLEDSK 1921
G S + +V ++E L P+ A+K++++ + S D D DS
Sbjct: 2094 KSG-GKSETDRRMVAA-RTEPL-TPN--PASKKQRVHKRGSESSSDSDSDSERSSCSSRS 2148
Query: 1922 GSIGDQMDCCQSGVVVPENLSDFCQP----SSSLAPWEAKIDGSSEKDPVSSQSVLEGSK 1977
S C S + S C SSS + + SS ++ S + V +
Sbjct: 2149 SSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEVQKREG 2208
Query: 1978 ETVAEAGDQMDISIMPEKLPEHLD-IPASLATPE 2010
A+A D+ ++ + E D AS PE
Sbjct: 2209 TPHAKAYDEESVASLSATQDETQDSFQASNGAPE 2242
Score = 53 (23.7 bits), Expect = 1.6e-54, Sum P(4) = 1.6e-54
Identities = 33/179 (18%), Positives = 72/179 (40%)
Query: 700 STPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSG 759
S P+ PK GEQ + + ++ A ++ + P+P + +Q + + S
Sbjct: 2076 SEPVSPKNGVLSQAPGEQKSGGKSETDRRMVAARTEPLT---PNPASKKQRVHKRGSESS 2132
Query: 760 GESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXX 819
+S + D SS + S S S +SG+ SS+ S +++ +++
Sbjct: 2133 SDSDS-DSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSC---SSASSSSSSSSSSSSS 2188
Query: 820 XXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGP-ESKSNLQSENNS 877
++ + +K + TP + A ++ +SA E++ + Q+ N +
Sbjct: 2189 SSSSSSEESDSEEEVQKREG---TPHAK----AYDEESVASLSATQDETQDSFQASNGA 2240
Score = 52 (23.4 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 1804 PEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPR 1853
PE+K KDDI + + LV+ D + GD++ P + R
Sbjct: 1736 PEYKPAPAIFKDDIEDDVSSPGDLVIADGEGQLMEGDKVYWPTPSALTTR 1785
Score = 50 (22.7 bits), Expect = 1.0e-52, Sum P(5) = 1.0e-52
Identities = 26/117 (22%), Positives = 47/117 (40%)
Query: 1435 VIGNVPGNTSEDSSKMPLETPLIMKSTEG--PSVSMKADDVADHSRETPILSGSPINSGT 1492
V+ PG + K + ++ TE P+ + K V H R + S S +S +
Sbjct: 2085 VLSQAPGE-QKSGGKSETDRRMVAARTEPLTPNPASKKQRV--HKRGSE--SSSDSDSDS 2139
Query: 1493 ECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDA 1549
E S+ S ++ + +S S RSG +S+ C + S + + S +
Sbjct: 2140 ERSSCSSRSSSSS-----SSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSS 2191
Score = 48 (22.0 bits), Expect = 1.6e-52, Sum P(5) = 1.6e-52
Identities = 21/113 (18%), Positives = 40/113 (35%)
Query: 1114 NQHSQNKSRDSFGSKTISLRSKQETADVNDVARV-MKEIFSETCSSKAKTGDSSLNEGKD 1172
++ S + DS S S S ++ +R S +CSS + + SS +
Sbjct: 2129 SESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSS 2188
Query: 1173 XXXXXXXXXXXXXEVAKKQSS-------DDKTCSVTPTVETPPPGFNSPNENP 1218
EV K++ + ++ S++ T + F + N P
Sbjct: 2189 SSSSSSEESDSEEEVQKREGTPHAKAYDEESVASLSATQDETQDSFQASNGAP 2241
Score = 46 (21.3 bits), Expect = 5.7e-56, Sum P(4) = 5.7e-56
Identities = 17/68 (25%), Positives = 29/68 (42%)
Query: 1106 SAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADVNDVARVMKEIFSETCSSKAKTG-D 1164
S FD + N+ S +S S K R + + + E ++ S +A +G D
Sbjct: 2807 SNTFDVQKNKSSDLESSKSVEIKEEDSRGRDQEEKGGTEPSPLNENSTDEGSERASSGSD 2866
Query: 1165 SSLNEGKD 1172
SS + +D
Sbjct: 2867 SSSSSSED 2874
Score = 45 (20.9 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 33/174 (18%), Positives = 62/174 (35%)
Query: 1881 EREKSEELGLPSLSSAT--KEEKI---DGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGV 1935
E + SEE + S+ + T K E + +G L + P K +M ++
Sbjct: 2056 EPQSSEEESMSSMETRTRVKSEPVSPKNGVLSQAPGEQK---SGGKSETDRRMVAARTEP 2112
Query: 1936 VVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEK 1995
+ P S + + + D SE+ SS+S S + + + S
Sbjct: 2113 LTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSC 2172
Query: 1996 LPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGAT 2049
+S ++ + S ++ DS Q+ +A D+ V+ AT
Sbjct: 2173 SSASSSSSSSSSSSSSSSSSSSEESDSEEEVQKREGTPHAKAYDEESVASLSAT 2226
Score = 43 (20.2 bits), Expect = 3.4e-55, Sum P(5) = 3.4e-55
Identities = 16/76 (21%), Positives = 26/76 (34%)
Query: 648 STSASASLPXXXXXXXXXXXAQHVMVGIAPSSQPTTAFVPVAPGSQSASACPSTPMQPKG 707
S S +S H G + SS + + + S S+S+ S+
Sbjct: 2137 SDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCS----SASSSSSSSSSSSSSSSSS 2192
Query: 708 RGRRIQSGEQVPRRRG 723
S E+V +R G
Sbjct: 2193 SSEESDSEEEVQKREG 2208
Score = 43 (20.2 bits), Expect = 4.9e-55, Sum P(4) = 4.9e-55
Identities = 16/76 (21%), Positives = 30/76 (39%)
Query: 2246 SASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGS 2305
S S G S + ++ + + + S S+ E +K EG
Sbjct: 2156 SCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEVQKREGTPHAKAY 2215
Query: 2306 EKESIAS-AVPLDESK 2320
++ES+AS + DE++
Sbjct: 2216 DEESVASLSATQDETQ 2231
Score = 43 (20.2 bits), Expect = 5.4e-52, Sum P(5) = 5.4e-52
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 1191 QSSDDKTCSVTPT---VETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTE 1247
QSS++++ S T V++ P SP G L+ + G + +A++TE
Sbjct: 2058 QSSEEESMSSMETRTRVKSEPV---SPKN--GVLSQAPGEQK-SGGKSETDRRMVAARTE 2111
Query: 1248 ALKPENKAQAGRIENIANSSPDD 1270
L P ++ R+ + S D
Sbjct: 2112 PLTPNPASKKQRVHKRGSESSSD 2134
Score = 42 (19.8 bits), Expect = 5.7e-56, Sum P(4) = 5.7e-56
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R RE+ S ++ Q E + E +C+A
Sbjct: 1504 YGWG-RWREILSHGRFKRQLNEHDVEVICRA 1533
Score = 42 (19.8 bits), Expect = 6.3e-55, Sum P(4) = 6.3e-55
Identities = 19/100 (19%), Positives = 38/100 (38%)
Query: 2305 SEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSD 2364
SE+ S +S S + S ++ S + +S ++ +E SD
Sbjct: 2139 SERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESD 2198
Query: 2365 KEPVGSSVSQIESKE--PEAKAFEPMDVVDGAVALENTSE 2402
E +++ +E P AKA++ V + + T +
Sbjct: 2199 SE------EEVQKREGTPHAKAYDEESVASLSATQDETQD 2232
Score = 39 (18.8 bits), Expect = 2.6e-54, Sum P(3) = 2.6e-54
Identities = 18/84 (21%), Positives = 40/84 (47%)
Query: 1850 FSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKD 1909
F S+ +D+ V ++ + S + + +++ E+L A EE+ +GS +
Sbjct: 1316 FDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCE 1375
Query: 1910 PDSNLVVLEDSKGSIGDQMDCCQS 1933
D + ++L +K +I + + C S
Sbjct: 1376 EDIDQILLRRTK-TITIESEGCGS 1398
Score = 38 (18.4 bits), Expect = 2.5e-53, Sum P(5) = 2.5e-53
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1960 GSSEKDPVSSQSVLEGSKETVAEAGDQMDIS 1990
G +E P++ S EGS E + D S
Sbjct: 2842 GGTEPSPLNENSTDEGS-ERASSGSDSSSSS 2871
Score = 37 (18.1 bits), Expect = 3.4e-55, Sum P(5) = 3.4e-55
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 2003 PASLATPEEKTEGSEKDPDSSFAAQEDPKES 2033
P + + +E +E + DSS ++ ED S
Sbjct: 2848 PLNENSTDEGSERASSGSDSSSSSSEDSDSS 2878
Score = 37 (18.1 bits), Expect = 1.8e-53, Sum P(4) = 1.8e-53
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 2050 VMEKSSEDLATPPLSLANEEEMIEGFDNDP 2079
V+++ E LA P L+ + ++ G N P
Sbjct: 1661 VIQQPHETLAAPWAPLSCDFWLLLGLSNSP 1690
Score = 37 (18.1 bits), Expect = 2.5e-53, Sum P(5) = 2.5e-53
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 928 RVVQSNQPINLPATHDSSSQPSGSTPAQV 956
R++ + Q N H +QP+ S PA V
Sbjct: 1788 RLITAYQRTN-KNRHIQQAQPTFSVPASV 1815
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 633 (227.9 bits), Expect = 8.1e-56, Sum P(6) = 8.1e-56
Identities = 156/412 (37%), Positives = 223/412 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 1069 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 1126
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1127 GTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF-------GDLKTEEQ----------VQ 1169
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 1170 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQA 1229
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTL---IPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ +T P L +++ GKL ++D
Sbjct: 1230 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLID 1289
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1290 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1349
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQV--DLQAQARAHRIGQKRDVLVLRF 366
S F+FLL RAGG+G+NL AADT IIFD+DWNP++ QAQAR HRIGQ + V + R
Sbjct: 1350 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPKMISSFQAQARCHRIGQSKSVKIYRL 1409
Query: 367 ETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
T + E ++ A KLG+ QS++ N + ++ +E LLR+
Sbjct: 1410 ITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLRK 1461
Score = 63 (27.2 bits), Expect = 8.1e-56, Sum P(6) = 8.1e-56
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 2343 PEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALEN 2399
P++A+G A F EEE E SD E ++ E E E +D +DG +EN
Sbjct: 2933 PDKAEGGA-F--QEEENAEGSDAEESLDKTAESSVLEDEMAQGEELDSLDGGDEIEN 2986
Score = 63 (27.2 bits), Expect = 6.6e-55, Sum P(5) = 6.6e-55
Identities = 36/168 (21%), Positives = 63/168 (37%)
Query: 2228 SPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIID----AEGGGNMRQTVPQDLG 2283
+P+ V P E K +AE + D AEG G ++ +D
Sbjct: 2146 NPLAVGFGQTPVATPAAPGQEEKTAAEGKAEEAERPEVKDEEEEAEGSGKDKK---RDRE 2202
Query: 2284 LPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVP 2343
++ E + +E G + S + +E K D + S +++ G VS
Sbjct: 2203 AEAGAARNEPKGVE-VGADTGPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKN 2261
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVV 2391
+ + AS A +E + E +V+Q+ + A +F P D V
Sbjct: 2262 FDEESNASMSTARDETRDGFYMEDGDPAVAQLLHERTFAFSFWPKDRV 2309
Score = 60 (26.2 bits), Expect = 1.3e-54, Sum P(5) = 1.3e-54
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 2338 VSIPV-PEEADGPASFLAAEE-EKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAV 2395
V+ P P + + A+ AEE E+ E D+E + + ++ EA+A GA
Sbjct: 2157 VATPAAPGQEEKTAAEGKAEEAERPEVKDEEEEAEGSGKDKKRDREAEA--------GAA 2208
Query: 2396 ALENTSEGMGGPSPPLVIAEDKTENEIEEDPVVNSVAVEESKGSEA 2441
E +G + P I+E +E + EE+ + + EES EA
Sbjct: 2209 RNEPKGVEVGADTGPKSISEKGSEED-EEEKLEDDDKSEESSQPEA 2253
Score = 59 (25.8 bits), Expect = 8.1e-56, Sum P(6) = 8.1e-56
Identities = 29/127 (22%), Positives = 53/127 (41%)
Query: 1960 GSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKD 2019
G EK ++ E + V + ++ + S +K + A+ P+ G++
Sbjct: 2164 GQEEKTAAEGKAE-EAERPEVKDEEEEAEGSGKDKKRDREAEAGAARNEPKGVEVGADTG 2222
Query: 2020 PDS-SFAAQEDPKESVVEAGDQMGVSL---GGATVMEKSSEDLATPPLSLANEEEMIEGF 2075
P S S E+ +E +E D+ S GA K+ ++ + +S A +E +GF
Sbjct: 2223 PKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARDETR-DGF 2281
Query: 2076 ---DNDP 2079
D DP
Sbjct: 2282 YMEDGDP 2288
Score = 59 (25.8 bits), Expect = 6.6e-55, Sum P(5) = 6.6e-55
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 2144 VTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEP 2203
V + D+K AE +L GG E +E+E E + P +D+ + P +
Sbjct: 1823 VGMPDAKAIAAEQRGT-DMLADGGDGGEFDREDEDPEYKPTRTPFKDEIDEFANSPPEDK 1881
Query: 2204 CVQMDVRGDG 2213
M++R G
Sbjct: 1882 EEPMEIRAPG 1891
Score = 58 (25.5 bits), Expect = 1.0e-55, Sum P(6) = 1.0e-55
Identities = 22/98 (22%), Positives = 38/98 (38%)
Query: 1960 GSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKD 2019
G+ ++ +V G A + E E + P + EE+ EGS KD
Sbjct: 2138 GAGSTSALNPLAVGFGQTPVATPAAPGQEEKTAAEGKAEEAERP-EVKDEEEEAEGSGKD 2196
Query: 2020 PDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSED 2057
A+ + + G ++G G ++ EK SE+
Sbjct: 2197 KKRDREAEAGAARNEPK-GVEVGADTGPKSISEKGSEE 2233
Score = 58 (25.5 bits), Expect = 1.7e-54, Sum P(6) = 1.7e-54
Identities = 20/77 (25%), Positives = 32/77 (41%)
Query: 1981 AEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ 2040
A AG Q + EK P+ + EE EGS+ + A+ E + G++
Sbjct: 2917 ALAGLQNAVGSGEEKAPDKAE--GGAFQEEENAEGSDAEESLDKTAESSVLEDEMAQGEE 2974
Query: 2041 MGVSLGGATVMEKSSED 2057
+ SL G +E + D
Sbjct: 2975 LD-SLDGGDEIENNEND 2990
Score = 55 (24.4 bits), Expect = 8.1e-56, Sum P(6) = 8.1e-56
Identities = 18/48 (37%), Positives = 20/48 (41%)
Query: 1250 KPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQS 1297
KP I+ ANS P+DK PM E PG KH E S
Sbjct: 1860 KPTRTPFKDEIDEFANSPPEDKEEPM----EIRAPG------KHGESS 1897
Score = 53 (23.7 bits), Expect = 7.1e-54, Sum P(5) = 7.1e-54
Identities = 23/82 (28%), Positives = 35/82 (42%)
Query: 732 AASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPS--AVKGQ 789
AA P+ GP + +++ G E + + AP PDS + S A G
Sbjct: 2818 AAGTSAPAAGPGEADDGTSKADE---KGAEHEDENKDSEKSTDAPAPDSANGSVGAAPGP 2874
Query: 790 SGTIDPSSAVAALNSELNTNLA 811
+G PSS +A N L + +A
Sbjct: 2875 AGL--PSSPLA-FNPFLLSTMA 2893
Score = 52 (23.4 bits), Expect = 5.3e-55, Sum P(6) = 5.3e-55
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 1316 APASTEAFEQEKVTNTSSFVNLADLS-SDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEI 1374
AP + ++ Q++ S V A +S S+D T S + E A +P ++ + EI
Sbjct: 2344 APPTADSPLQKRSLAELSMVGQASISGSEDLTASPQMSKEDALNLSVPRQRRRRRRKIEI 2403
Query: 1375 DAK 1377
+A+
Sbjct: 2404 EAE 2406
Score = 52 (23.4 bits), Expect = 7.1e-54, Sum P(6) = 7.1e-54
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 1898 KEEKIDGS-----LDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSD 1943
+EE +GS LDK +S+ VLED G+++D G + N +D
Sbjct: 2943 EEENAEGSDAEESLDKTAESS--VLEDEMAQ-GEELDSLDGGDEIENNEND 2990
Score = 50 (22.7 bits), Expect = 3.5e-54, Sum P(6) = 3.5e-54
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 700 STPMQPKGRGRRIQ-SGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPS 758
S P Q + R R+I+ E+ +RR + +V + S N Q + L+ +
Sbjct: 2389 SVPRQRRRRRRKIEIEAERAAKRRNL-MEMVAQLRESQVVSE------NGQEKVVDLSKA 2441
Query: 759 GGESTATDGNVSSIPTAPVPDSVS 782
E+T++ N SS+ + + +VS
Sbjct: 2442 SREATSSTSNFSSLASKFILPNVS 2465
Score = 50 (22.7 bits), Expect = 1.1e-53, Sum P(6) = 1.1e-53
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 1795 DNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRID 1843
D EGG E +E ++ + S VL+D+ ++ E D +D
Sbjct: 2934 DKAEGGAFQEEENAEGSDAEESLDKT---AESSVLEDEMAQGEELDSLD 2979
Score = 50 (22.7 bits), Expect = 1.1e-53, Sum P(6) = 1.1e-53
Identities = 35/186 (18%), Positives = 65/186 (34%)
Query: 1154 ETCSSKAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTC-SVTPTVETPPPGFN 1212
E + A+ + G D + +K DDK+ S P G N
Sbjct: 2202 EAEAGAARNEPKGVEVGADTGPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKN 2261
Query: 1213 SPNENPGELTGTKN---DASVRGDHTPVSGHTLASKTEALK--PENKAQAGRIENIANSS 1267
E+ ++ ++ D D P L +T A P+++ R++NI +
Sbjct: 2262 FDEESNASMSTARDETRDGFYMEDGDPAVAQLLHERTFAFSFWPKDRVMINRLDNICEAV 2321
Query: 1268 -----PDDKSLP-----MVPNLETAPPGFDIPIEKHNEQSRNQ-NNPEVKGEETPVSSEA 1316
P ++ ++P APP D P++K + + + G E +S
Sbjct: 2322 LKGKWPVNRRQMFDFQGLLPGY--APPTADSPLQKRSLAELSMVGQASISGSEDLTASPQ 2379
Query: 1317 PASTEA 1322
+ +A
Sbjct: 2380 MSKEDA 2385
Score = 49 (22.3 bits), Expect = 8.1e-56, Sum P(6) = 8.1e-56
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 2174 QEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVPETVPEELGLPSSPM 2230
+ ++ T + EK G+ +DE+K E +G V P GLPSSP+
Sbjct: 2830 EADDGTSKADEK---GAEHEDENKDSEKSTDAPAPDSANGSVG-AAPGPAGLPSSPL 2882
Score = 48 (22.0 bits), Expect = 5.3e-55, Sum P(6) = 5.3e-55
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 1382 NTPLPGEAIVAGIEVFKPENKTDGDSV--EKLEDTVDDHS-LVKELIHRSPDHSDMVIGN 1438
NTPL A + P DG S EK + D++ K +PD ++ +G
Sbjct: 2812 NTPLSAAAGTSA-PAAGPGEADDGTSKADEKGAEHEDENKDSEKSTDAPAPDSANGSVGA 2870
Query: 1439 VPGNTSEDSSKMPLETPLIMKSTEGPSV 1466
PG SS + P ++ ST P +
Sbjct: 2871 APGPAGLPSSPLAFN-PFLL-STMAPGL 2896
Score = 48 (22.0 bits), Expect = 2.6e-54, Sum P(7) = 2.6e-54
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 1459 KSTEGPSVSMKADDVADH--SRETPILSGSPINSGTECSTVSVKTDVGNHPQNVEPTSAS 1516
+ EG K D A+ +R P G + + T ++S K + + +E S
Sbjct: 2188 EEAEGSGKDKKRDREAEAGAARNEP--KGVEVGADTGPKSISEKGSEEDEEEKLEDDDKS 2245
Query: 1517 PERSGPQNSAV 1527
E S P+ AV
Sbjct: 2246 EESSQPEAGAV 2256
Score = 48 (22.0 bits), Expect = 3.5e-54, Sum P(6) = 3.5e-54
Identities = 26/86 (30%), Positives = 38/86 (44%)
Query: 846 RRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQ 905
RRG+R P S+++ + + + S + L L S+ G Q L N +Q
Sbjct: 2710 RRGRR------PKSEIARAAAAAAAVASTSGINPL-LVNSLFAGMDLTSLQNLQNLQSLQ 2762
Query: 906 -------PCGVATSADVAGPDQK-PA 923
P G+AT+A AG D K PA
Sbjct: 2763 LAGLMGFPPGLATAAAAAGGDTKNPA 2788
Score = 47 (21.6 bits), Expect = 6.8e-55, Sum P(6) = 6.8e-55
Identities = 20/57 (35%), Positives = 25/57 (43%)
Query: 1535 IPSMEAEVAKCPSDAIVNNLLETPLDIKSIGGPIVSMKAADVADADHPLETAVELGS 1591
+P M VA PS + LL TPL + G S AA +AD A E G+
Sbjct: 2791 LPLMLPGVAGLPSVFGLGGLLNTPLS--AAAG--TSAPAAGPGEADDGTSKADEKGA 2843
Score = 46 (21.3 bits), Expect = 6.6e-55, Sum P(5) = 6.6e-55
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 1777 KADVVLDEHGKVQLLPGADNPEGGVIVPE 1805
+ +V+ D+ K+ L GAD+ E V +PE
Sbjct: 1751 RQEVIGDQAEKI--LDGADSSEADVWIPE 1777
Score = 44 (20.5 bits), Expect = 2.8e-54, Sum P(6) = 2.8e-54
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 1955 EAKIDGSSEKDPVSSQSVLEGS-----KETVAEAG----DQMDISIMPEKLPEHLDIPAS 2005
E K + + + + EGS ++ AEAG + + + + P+ + S
Sbjct: 2172 EGKAEEAERPEVKDEEEEAEGSGKDKKRDREAEAGAARNEPKGVEVGADTGPKSISEKGS 2231
Query: 2006 LATPEEKTEGSEKDPDSS 2023
EEK E +K +SS
Sbjct: 2232 EEDEEEKLEDDDKSEESS 2249
Score = 43 (20.2 bits), Expect = 1.0e-54, Sum P(7) = 1.0e-54
Identities = 17/68 (25%), Positives = 31/68 (45%)
Query: 1992 MPEKLPEHLDIP-ASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATV 2050
MP +P++ D+ +S P++K ++P+ +E V + G +GGA
Sbjct: 2599 MPSYVPKNADVLFSSFQKPKQKRHRC-RNPNKLDINTLTGEERVPVVNKRNGKKMGGA-- 2655
Query: 2051 MEKSSEDL 2058
M +DL
Sbjct: 2656 MAPPMKDL 2663
Score = 43 (20.2 bits), Expect = 2.8e-52, Sum P(7) = 2.8e-52
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 855 SPPISDVSAGPESKSNLQSENN---SGGLRLSKSVSMGKQDALS 895
+PP +D S + L SG L+ S M K+DAL+
Sbjct: 2344 APPTADSPLQKRSLAELSMVGQASISGSEDLTASPQMSKEDALN 2387
Score = 42 (19.8 bits), Expect = 7.1e-54, Sum P(5) = 7.1e-54
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 716 EQVP---RRRGKKIGLVLPAASDDIP 738
E+VP +R GKK+G + D+P
Sbjct: 2639 ERVPVVNKRNGKKMGGAMAPPMKDLP 2664
Score = 41 (19.5 bits), Expect = 8.1e-56, Sum P(6) = 8.1e-56
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQ 550
YG G R ++ S Y+ Q TE++ E +C+
Sbjct: 1618 YGWG-RWTDILSHGRYKRQLTEQDVETICR 1646
Score = 41 (19.5 bits), Expect = 2.2e-52, Sum P(7) = 2.2e-52
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 754 SLNPSGGEST-ATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNL 810
+L+ E T A + ++ + PT +P SP G +DP + + +N E T L
Sbjct: 2527 ALSAEDAEVTKAFEEDIETPPTRNIP---SP-------GQLDPDTRIPVINLEDGTRL 2574
Score = 40 (19.1 bits), Expect = 5.4e-53, Sum P(7) = 5.4e-53
Identities = 13/57 (22%), Positives = 19/57 (33%)
Query: 1159 KAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVTPTVETPPPGFNSPN 1215
K + G EG D E A+ + ++ PT P PG P+
Sbjct: 2504 KRRRGRRKNVEGLDLLFMSHRRTALSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPD 2560
Score = 39 (18.8 bits), Expect = 3.7e-53, Sum P(6) = 3.7e-53
Identities = 21/86 (24%), Positives = 31/86 (36%)
Query: 1210 GFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPD 1269
G ++P PGE + A +G T+A P++ G + ++P
Sbjct: 2820 GTSAPAAGPGEADDGTSKADEKGAEHEDENKDSEKSTDAPAPDSAN--GSV----GAAPG 2873
Query: 1270 DKSLPMVP---N---LETAPPGFDIP 1289
LP P N L T PG P
Sbjct: 2874 PAGLPSSPLAFNPFLLSTMAPGLFYP 2899
Score = 38 (18.4 bits), Expect = 2.2e-52, Sum P(7) = 2.2e-52
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 701 TPMQPKGRGRRIQSGEQVPRRRGKK 725
TP + G + S V RRRG++
Sbjct: 2486 TPSRHLLNGSLVDSEPPVKRRRGRR 2510
Score = 37 (18.1 bits), Expect = 7.1e-54, Sum P(6) = 7.1e-54
Identities = 13/61 (21%), Positives = 23/61 (37%)
Query: 2004 ASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPL 2063
A A P E +G+ K + +++ K+S S G+ L + PL
Sbjct: 2823 APAAGPGEADDGTSKADEKGAEHEDENKDSEKSTDAPAPDSANGSVGAAPGPAGLPSSPL 2882
Query: 2064 S 2064
+
Sbjct: 2883 A 2883
Score = 37 (18.1 bits), Expect = 6.8e-53, Sum P(7) = 6.8e-53
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 1295 EQSRNQNNPEVKGEETPVSSE 1315
E R +PE K TP E
Sbjct: 1849 EFDREDEDPEYKPTRTPFKDE 1869
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 642 (231.1 bits), Expect = 9.2e-56, Sum P(5) = 9.2e-56
Identities = 156/405 (38%), Positives = 224/405 (55%)
Query: 1 MLFVQCVMAVLLYSRE---KIVH--QKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEG 55
M+ Q + +Y R+ +IV +F ++TT+E ++ P+L+ I+W +IIDE
Sbjct: 939 MISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITTFEMILG--GCPELNAIEWRCVIIDEA 996
Query: 56 HRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFN 115
HR+KN +CKL LK H++LLTGTP F + F Q F
Sbjct: 997 HRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEF- 1055
Query: 116 KPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEA 175
GD + + +L +L+P +LRRLK VE +L K E ++ E
Sbjct: 1056 ------GDLKTEEQ----------VQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVEL 1099
Query: 176 SAYQKLLMKRV-EENLGSIGNSKGRS----VHNSVMELRNICNHPYLSQLHAEEV----- 225
+ QK + + E+N + G++ + N++MELR CNHPYL + E++
Sbjct: 1100 TNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFK 1159
Query: 226 DTL---IPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQ 282
+T P +L +++ GKL ++D+LLPK+KA H+VL FS M R LD++EDYL K+
Sbjct: 1160 ETYNPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR 1219
Query: 283 YRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNP 342
Y Y R+DG G R A ID+F++ DS F+FLL RAGG+G+NL AADT IIFD+DWNP
Sbjct: 1220 YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 1279
Query: 343 QVDLQ-AQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 386
Q DLQ AQAR HRIGQ + V V R T + E ++ A KLG+
Sbjct: 1280 QNDLQKAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGL 1324
Score = 83 (34.3 bits), Expect = 9.2e-56, Sum P(5) = 9.2e-56
Identities = 41/190 (21%), Positives = 76/190 (40%)
Query: 833 QSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQD 892
QS+ S TP + AL + P++ S P++K N + + +++
Sbjct: 2001 QSKVALSRTSTPLLHQYQMALSASPLTPQSRLPDAKVNTPEDTKVKSENRKEDAQSSEEE 2060
Query: 893 ALS-QELSNKIQVQPCGVATSADVAGPDQKPA---EQSVRVVQSN-QPINL-PATHDSSS 946
++S +E ++ +P A V + KP+ E R+V + +P+ PA+
Sbjct: 2061 SMSTEETQTVMKSEPLSPKNGAPVQNTEHKPSVKIEADRRMVAARTEPLTPNPASKKQRV 2120
Query: 947 QPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEEKA 1006
GS + D SD S +SSS + S+ + R S +
Sbjct: 2121 SKRGSDSSSDSDSD-----SDRSSCSSRSSSSSS------SSSSSCSHSRSGSSSSSSSS 2169
Query: 1007 CTNASKSKAT 1016
C++AS S ++
Sbjct: 2170 CSSASSSSSS 2179
Score = 69 (29.3 bits), Expect = 1.5e-55, Sum P(4) = 1.5e-55
Identities = 49/266 (18%), Positives = 107/266 (40%)
Query: 693 QSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQS 752
++ + S P+ PK G +Q+ E P + + ++ A ++ + P+P + +Q S
Sbjct: 2066 ETQTVMKSEPLSPKN-GAPVQNTEHKPSVKIEADRRMVAARTEPLT---PNPASKKQRVS 2121
Query: 753 ESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLAT 812
+ + S +S + D + SS + S S S+ S + SS+ ++ +S +++ ++
Sbjct: 2122 KRGSDSSSDSDS-DSDRSSCSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSS 2180
Query: 813 AXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAG-PESKSNL 871
+ + +++K G TP + A ++ +S E++ +
Sbjct: 2181 SSSSSSSSSSSSEESDSDEEEAQKRAEG--TPHIK----AYDEESVASLSTTHDETQDSF 2234
Query: 872 QSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAG--PDQKPAEQSVRV 929
Q N+G S + G A S +++ + + G P + S V
Sbjct: 2235 QM--NNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARRNYDSNTV 2292
Query: 930 VQ--SNQPINLPATHDSSSQPSGSTP 953
+ + ++ P S+PS TP
Sbjct: 2293 ASFYTTKLLDSPGAATDYSEPSAPTP 2318
Score = 63 (27.2 bits), Expect = 1.1e-53, Sum P(5) = 1.1e-53
Identities = 34/182 (18%), Positives = 66/182 (36%)
Query: 1200 VTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHT-LASKTEALKPENKAQAG 1258
+TP P N+P + + K DA + + + T K+E L P+N A
Sbjct: 2026 LTPQSRLPDAKVNTPEDTKVKSENRKEDAQSSEEESMSTEETQTVMKSEPLSPKNGAPVQ 2085
Query: 1259 RIENIANSSPD-DKSL------PMVPN-----LETAPPGFDIPIEKHNEQSRNQNNPEVK 1306
E+ + + D+ + P+ PN + G D + ++ R+ +
Sbjct: 2086 NTEHKPSVKIEADRRMVAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSS 2145
Query: 1307 GEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKG 1366
+ SS S ++ SS + + SS + S + + E + + +K
Sbjct: 2146 SSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKR 2205
Query: 1367 VE 1368
E
Sbjct: 2206 AE 2207
Score = 60 (26.2 bits), Expect = 6.2e-55, Sum P(5) = 6.2e-55
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 1795 DNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPR 1853
D +G V PE+K KDDI + + LV+ D + GD+I P + R
Sbjct: 1724 DYMDGDVEDPEYKPAPAMFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTR 1782
Score = 58 (25.5 bits), Expect = 6.8e-54, Sum P(6) = 6.8e-54
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 1444 SEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDV 1503
S+ SS ++ S+ S S + HSR SGS +S + CS+ S +
Sbjct: 2125 SDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSR-----SGSSSSSSSSCSSASSSSSS 2179
Query: 1504 GNHPQNVEPTSASPERSGPQNSA 1526
+ + +S+S E + A
Sbjct: 2180 SSSSSSSSSSSSSEESDSDEEEA 2202
Score = 56 (24.8 bits), Expect = 5.6e-53, Sum P(5) = 5.6e-53
Identities = 22/106 (20%), Positives = 41/106 (38%)
Query: 1442 NTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKT 1501
NT ED+ +S+E S+S + S +G+P+ + +V ++
Sbjct: 2038 NTPEDTKVKSENRKEDAQSSEEESMSTEETQTVMKSEPLSPKNGAPVQNTEHKPSVKIEA 2097
Query: 1502 DVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPS 1547
D EP + +P + S G D S +++ + C S
Sbjct: 2098 DRRMVAARTEPLTPNPASKKQRVSKRG-SDSSSDSDSDSDRSSCSS 2142
Score = 55 (24.4 bits), Expect = 6.8e-54, Sum P(6) = 6.8e-54
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 1191 QSSDDKTCSV--TPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEA 1248
QSS++++ S T TV P + N P + T K + D V A++TE
Sbjct: 2055 QSSEEESMSTEETQTVMKSEP-LSPKNGAPVQNTEHKPSVKIEADRRMV-----AARTEP 2108
Query: 1249 LKPENKAQAGRIENIANSSPDD 1270
L P ++ R+ + S D
Sbjct: 2109 LTPNPASKKQRVSKRGSDSSSD 2130
Score = 54 (24.1 bits), Expect = 6.2e-55, Sum P(5) = 6.2e-55
Identities = 36/143 (25%), Positives = 57/143 (39%)
Query: 1896 ATKEEKI-----DGSLDKDPDSNLVVLED--SKGSIGDQMDCCQSGVVVPENLSDFCQPS 1948
A+K++++ D S D D DS+ S S C S + S C +
Sbjct: 2114 ASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSA 2173
Query: 1949 SSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLAT 2008
SS + SS SS S E S EA + + + + E + ASL+T
Sbjct: 2174 SSSS------SSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDE--ESVASLST 2225
Query: 2009 PEEKTEGSEK----DPDSSFAAQ 2027
++T+ S + P+SS+ Q
Sbjct: 2226 THDETQDSFQMNNGTPNSSYLLQ 2248
Score = 51 (23.0 bits), Expect = 1.8e-52, Sum P(5) = 1.8e-52
Identities = 32/155 (20%), Positives = 62/155 (40%)
Query: 1398 KPEN-KTDGDSVEKLEDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPL 1456
K EN K D S E+ + ++ V + SP + V + S K+ + +
Sbjct: 2046 KSENRKEDAQSSEEESMSTEETQTVMKSEPLSPKNG----APVQNTEHKPSVKIEADRRM 2101
Query: 1457 IMKSTEG--PSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDVGNHPQNVEPTS 1514
+ TE P+ + K V+ + S S +S ++ S+ S ++ + + +S
Sbjct: 2102 VAARTEPLTPNPASKKQRVSKRGSD----SSSDSDSDSDRSSCSSRSSSSSSSSS---SS 2154
Query: 1515 ASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDA 1549
S RSG +S+ C + S + + S +
Sbjct: 2155 CSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSS 2189
Score = 49 (22.3 bits), Expect = 2.9e-52, Sum P(5) = 2.9e-52
Identities = 28/137 (20%), Positives = 49/137 (35%)
Query: 1082 TPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADV 1141
TP + ++R K+GS S S + + S + S S S + S RS ++
Sbjct: 2110 TPNPA-SKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHS-RSGSSSSSS 2167
Query: 1142 NDVARVMKEIFSETCSSKAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVT 1201
+ + S + SS + + SS +E D K ++ S++
Sbjct: 2168 SSCSSASSS--SSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYD-EESVASLS 2224
Query: 1202 PTVETPPPGFNSPNENP 1218
T + F N P
Sbjct: 2225 TTHDETQDSFQMNNGTP 2241
Score = 48 (22.0 bits), Expect = 7.2e-53, Sum P(6) = 7.2e-53
Identities = 21/85 (24%), Positives = 31/85 (36%)
Query: 1460 STEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDVGNHPQNVEPTSASPER 1519
S G S +D +D S + S S +S + CS S + + S+S
Sbjct: 2121 SKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSH-SRSGSSSSSSSSCSSASSSSSS 2179
Query: 1520 SGPQNSAVGFCDKSEIPSMEAEVAK 1544
S +S+ E S E E K
Sbjct: 2180 SSSSSSSSSSSSSEESDSDEEEAQK 2204
Score = 43 (20.2 bits), Expect = 9.2e-56, Sum P(5) = 9.2e-56
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 524 YGRGKRAREVRS---YEEQWTEEEFEKMCQA 551
YG G R RE+ S ++ Q E++ E +C+A
Sbjct: 1503 YGWG-RWREILSHGRFKRQLNEQDVEIICRA 1532
Score = 43 (20.2 bits), Expect = 2.3e-54, Sum P(3) = 2.3e-54
Identities = 20/81 (24%), Positives = 32/81 (39%)
Query: 677 PSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRR--IQSGEQVPRRRGKKIGLVLPAAS 734
P S P + S + S P+ K RGRR ++ + + R K+ V P +
Sbjct: 2401 PKSLPESGTSSHLTASANGVIVDSQPVLKKRRGRRKNVEGVDVLFINRNKQPNHVNPGIN 2460
Query: 735 DDIPSPGPDPKTNEQPQSESL 755
+ G P N QS+ +
Sbjct: 2461 SCQVAAGISPALN-YTQSQGM 2480
Score = 42 (19.8 bits), Expect = 9.4e-53, Sum P(4) = 9.4e-53
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKN 2360
V +P P+ ++ PA + AE +K+
Sbjct: 1658 VWVPEPDHSEVPAEWWDAEADKS 1680
Score = 42 (19.8 bits), Expect = 1.5e-51, Sum P(5) = 1.5e-51
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 843 TPRRRGKRQALG-SPPISDVSAGPESKSNLQSENNSGGLRLS 883
TP G ++ SP +S V K N+ GGL+L+
Sbjct: 2317 TPPLAGVKEEYDQSPQMSKVKKHVREKEFTVKINDEGGLKLT 2358
Score = 39 (18.8 bits), Expect = 9.2e-56, Sum P(5) = 9.2e-56
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 774 TAPVPDSVSPSAVKGQSGTID 794
+APVP VK Q+ T D
Sbjct: 1573 SAPVPRGRKGKKVKTQASTFD 1593
Score = 39 (18.8 bits), Expect = 9.2e-56, Sum P(5) = 9.2e-56
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 1960 GSSEKDPVSSQSVLEGSKETVAEAGDQMDISI-----MPEKLPE 1998
G S+K P S+ G ++ +A D + S P+ LPE
Sbjct: 2363 GLSQKRPFESEEGALGQQQYLARLRDLQNASETSLVNFPKSLPE 2406
Score = 38 (18.4 bits), Expect = 2.7e-53, Sum P(5) = 2.7e-53
Identities = 24/112 (21%), Positives = 41/112 (36%)
Query: 2247 ASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSE 2306
AS R +G D+ +++ D++ ++ SSS + G S S
Sbjct: 2114 ASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSS---SSSSCSHSR-SGSSS---SS 2166
Query: 2307 KESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEE 2358
S +SA S + SS ++ E + A+G A +EE
Sbjct: 2167 SSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEE 2218
Score = 38 (18.4 bits), Expect = 2.0e-51, Sum P(5) = 2.0e-51
Identities = 23/116 (19%), Positives = 45/116 (38%)
Query: 687 PVAP--GS--QSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGP 742
P++P G+ Q+ PS ++ R ++ P KK + + S
Sbjct: 2075 PLSPKNGAPVQNTEHKPSVKIEADRRMVAARTEPLTPNPASKKQRVSKRGSDSSSDSDSD 2134
Query: 743 DPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSA 798
+++ +S S + S S + + SS ++ S S S+ S + SS+
Sbjct: 2135 SDRSSCSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSS 2190
Score = 38 (18.4 bits), Expect = 4.0e-51, Sum P(5) = 4.0e-51
Identities = 12/80 (15%), Positives = 30/80 (37%)
Query: 1193 SDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPE 1252
SD +CS + + + + G + + + S + S + +S + + E
Sbjct: 2135 SDRSSCSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEE 2194
Query: 1253 NKAQAGRIENIANSSPDDKS 1272
+ + + A +P K+
Sbjct: 2195 SDSDEEEAQKRAEGTPHIKA 2214
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 643 (231.4 bits), Expect = 9.3e-56, Sum P(2) = 9.3e-56
Identities = 155/408 (37%), Positives = 226/408 (55%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++ +K V KF+VLLT+YE + D+ L I+W +++DE HR+KN K L
Sbjct: 808 VFRMKKEVQIKFHVLLTSYELITI--DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 865
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
Y+ ++LLLTGTP FN+ E F + F D S +
Sbjct: 866 YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ-- 916
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVE 187
I +LH +L P +LRRLK V +P K E +VR E S Y K ++ R
Sbjct: 917 --------IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 968
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEM 246
E L S G S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +
Sbjct: 969 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 1028
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN
Sbjct: 1029 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1088
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
+ F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF
Sbjct: 1089 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1148
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
T +VEE++ A+ K+ + + + G + S ++ L+ +L+
Sbjct: 1149 VTRASVEERITQVAKRKMMLTHLVVRPGL--GSKSGSMTKQELDDILK 1194
Score = 62 (26.9 bits), Expect = 2.0e-55, Sum P(4) = 2.0e-55
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 1211 FNSPNENPGELTGTKNDASVRGD-HTPVSG---HTLASKTEALKPENKAQAGRIENIANS 1266
+++P+ P G K+ + D +TPV H L + L + +AQ G ++
Sbjct: 1524 YSTPDLIPEGPEGKKSGEVISSDPNTPVPASPAHLLPAPL-GLPDKMEAQLGYMDE---K 1579
Query: 1267 SPDDKSLPMVP-NLETAPPGFD-IPIE-KHNEQSRNQNNPEVKGEET---PVSSEAPAST 1320
P + P P ++ P D + E KH + + E + EET P S E
Sbjct: 1580 DPGAQK-PRQPLEVQALPAALDRVESEDKHESPASKERAREERPEETEKAPPSPEQLPRE 1638
Query: 1321 EAF-EQEKVTNTS--SFVNL----ADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTE 1373
E E+EK+ + S ++ ++L DD +ET D K + G +
Sbjct: 1639 EVLPEKEKILDKLELSLIHSRGDSSELRPDDTKAEEKEPIETQQNGD----KEEDDEGKK 1694
Query: 1374 IDAKVKWK 1381
D K K+K
Sbjct: 1695 EDKKGKFK 1702
Score = 51 (23.0 bits), Expect = 1.2e-55, Sum P(4) = 1.2e-55
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 1964 KDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDI--PASLATPEEKTEGSEKDPD 2021
+ P S + E E +A + E LPE I L+ + + SE PD
Sbjct: 1609 ESPASKERAREERPEETEKAPPSPEQLPREEVLPEKEKILDKLELSLIHSRGDSSELRPD 1668
Query: 2022 SSFAAQEDPKESVVEAGDQ 2040
+ A +++P E+ + GD+
Sbjct: 1669 DTKAEEKEPIETQ-QNGDK 1686
Score = 49 (22.3 bits), Expect = 7.0e-54, Sum P(5) = 7.0e-54
Identities = 32/144 (22%), Positives = 63/144 (43%)
Query: 2302 PVGSEKESIASAVPLDESKGPDAEVSSQTA-IEG--GGVVSIPVPEEADGPASFLAAEEE 2358
P+G + A +DE K P A+ Q ++ + + ++ + PAS A EE
Sbjct: 1562 PLGLPDKMEAQLGYMDE-KDPGAQKPRQPLEVQALPAALDRVESEDKHESPASKERAREE 1620
Query: 2359 KNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAEDKT 2418
+ E ++K P S Q+ +E + + +D ++ ++L ++ P AE+K
Sbjct: 1621 RPEETEKAP--PSPEQLPREEVLPEKEKILDKLE--LSLIHSRGDSSELRPDDTKAEEKE 1676
Query: 2419 ENEIEEDPVVNSVAVEESKGSEAD 2442
E ++ N E+ +G + D
Sbjct: 1677 PIETQQ----NGDKEEDDEGKKED 1696
Score = 47 (21.6 bits), Expect = 1.2e-55, Sum P(4) = 1.2e-55
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 747 NEQPQSESLNPSGGESTATDGNVSSIPTAPVPDS 780
N + + L P G E + +SS P PVP S
Sbjct: 1521 NGKYSTPDLIPEGPEGKKSGEVISSDPNTPVPAS 1554
Score = 45 (20.9 bits), Expect = 1.2e-55, Sum P(4) = 1.2e-55
Identities = 28/126 (22%), Positives = 49/126 (38%)
Query: 445 ESVDKQRREEEMATWRKLIRGLGTDGE-PLPPLPSRLVTDDDLKALYEAMK---IYDAPK 500
E D + R E + R+ R L +D + PLPPL +R+ + ++ + + +
Sbjct: 1379 EDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMR 1438
Query: 501 TGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLK 560
G+ P H D RGK +E R+Y + E + + +
Sbjct: 1439 WGMPPQDAFN---SHWLVRDL----RGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVP 1491
Query: 561 EEGLEK 566
EGL +
Sbjct: 1492 REGLSR 1497
Score = 42 (19.8 bits), Expect = 2.0e-55, Sum P(4) = 2.0e-55
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 522 QHYGRGKRAREVRSY------EEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
++ G+GKR R+ +Y +++W +E + Q+E S + ++E E+
Sbjct: 1337 RNLGKGKRIRKQVNYNDASQEDQEWQDELSDN--QSEYSIGSEDEDEDFEE 1385
Score = 38 (18.4 bits), Expect = 5.9e-53, Sum P(5) = 5.9e-53
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESV 2034
+S++ +K+ E + +TP+ EG E S DP V
Sbjct: 1507 MSLVRKKVQEFEHVNGKYSTPDLIPEGPE-GKKSGEVISSDPNTPV 1551
Score = 37 (18.1 bits), Expect = 9.3e-56, Sum P(2) = 9.3e-56
Identities = 8/45 (17%), Positives = 23/45 (51%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E +D + + E+++E ++ P G S + ++ ++ +P+
Sbjct: 1364 ELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPL 1408
Score = 37 (18.1 bits), Expect = 2.0e-55, Sum P(4) = 2.0e-55
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 704 QPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDI 737
+P+G+ R QS Q+ R K + +L +I
Sbjct: 1386 RPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNI 1419
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 634 (228.2 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 148/378 (39%), Positives = 210/378 (55%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
+F ++TT+E ++ P+L+ I W +IIDE HR+KN +CKL K H++LLT
Sbjct: 1021 RFQAVITTFEMILG--GCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLT 1078
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S F Q F GD + +
Sbjct: 1079 GTPLQNTVEELFSLLHFLEPTRFPSENTFMQEF-------GDLKTEEQ----------VQ 1121
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE +L K E ++ E + QK + + E+N + G++
Sbjct: 1122 KLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQA 1181
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV-----DTLIPK---HYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL + E++ + P +L +++ GKL ++D
Sbjct: 1182 NVPNLLNTMMELRKCCNHPYLIKGAEEKIMEDFKEVYSPAAVDFHLQAMIQSAGKLVLID 1241
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPK+KA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1242 KLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1301
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1302 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLIT 1361
Query: 369 VQTVEEQVRASAEHKLGV 386
+ E ++ A KLG+
Sbjct: 1362 RNSYEREMFDRASLKLGL 1379
Score = 63 (27.2 bits), Expect = 1.3e-54, Sum P(4) = 1.3e-54
Identities = 38/152 (25%), Positives = 64/152 (42%)
Query: 1835 EAEIGDRIDEPQVDGFSPRSMSGV--VDEL--VDEAGDHMGVSHS-PV--HVVEREKSEE 1887
E E G+R + + P + SGV D++ V E+ M + + P+ + + R K ++
Sbjct: 2131 EEEAGERELKMETASVRPPTPSGVDEKDDILKVGESESRMEAARTKPLTPNSITR-KQKK 2189
Query: 1888 LGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSDFCQP 1947
L S A +E + D D D S+ S S +SG + S C
Sbjct: 2190 LSKRSRREARRESRSDS--DSDGSSSSSSSSSSSRSSSSSSSSSRSGSSSSSSSSS-CSS 2246
Query: 1948 --SSSLAPWEAKIDGSSEKDPVSSQSVLEGSK 1977
SSS + + +GS ++ + SV+ G K
Sbjct: 2247 GSSSSSSSSSSSSEGSDSEEAPKNASVVPGVK 2278
Score = 57 (25.1 bits), Expect = 1.9e-55, Sum P(4) = 1.9e-55
Identities = 28/134 (20%), Positives = 47/134 (35%)
Query: 1080 RKTPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETA 1139
RK + RR +++ S DGS+ + S + SR S S + S ++
Sbjct: 2185 RKQKKLSKRSRREARRESRSDSDSDGSSS-----SSSSSSSSRSSSSSSSSSRSGSSSSS 2239
Query: 1140 DVNDVARVMKEIFSETCSSKAKTGDSSLNEGKDXXXXXXXXXXXXXEVAKKQSSDD--KT 1197
+ + S + SS + G S K+ VA ++ D +
Sbjct: 2240 SSSSCSSGSSS--SSSSSSSSSEGSDSEEAPKNASVVPGVKGFDEDSVASLNTTQDDMQD 2297
Query: 1198 CSVTPTVETPPPGF 1211
VT + PP F
Sbjct: 2298 SHVTNGISNPPHPF 2311
Score = 55 (24.4 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 16/38 (42%), Positives = 17/38 (44%)
Query: 1440 PGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHS 1477
PG SED E P K T GP S KAD + S
Sbjct: 2896 PGQ-SEDKDSDEGEEPDEKKDTSGPEGSAKADSSSSES 2932
Score = 54 (24.1 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 24/136 (17%), Positives = 53/136 (38%)
Query: 1213 SPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKS 1272
SP N EL K + G+ L +T +++P + ++I +
Sbjct: 2114 SPLLNQTEL---KEEPLSEGEEE-AGERELKMETASVRPPTPSGVDEKDDILKVGESESR 2169
Query: 1273 LPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTS 1332
+ P +K +++SR + E + + S + +S+ + + +++S
Sbjct: 2170 MEAARTKPLTPNSITRKQKKLSKRSRREARRESRSDSDSDGSSSSSSSSSSSRSSSSSSS 2229
Query: 1333 SFVNLADLSSDDKTCS 1348
S + + SS +CS
Sbjct: 2230 SSRSGSSSSSSSSSCS 2245
Score = 54 (24.1 bits), Expect = 3.6e-55, Sum P(3) = 3.6e-55
Identities = 19/87 (21%), Positives = 32/87 (36%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAE 2415
E + SD + GSS S S + + G+ + ++S G S +
Sbjct: 2197 EARRESRSDSDSDGSSSSSSSSSSSRSSSSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSS 2256
Query: 2416 DKTENEIEEDPVVNSVAVEESKGSEAD 2442
+E E+ N+ V KG + D
Sbjct: 2257 SSSEGSDSEEAPKNASVVPGVKGFDED 2283
Score = 54 (24.1 bits), Expect = 2.7e-53, Sum P(5) = 2.7e-53
Identities = 37/166 (22%), Positives = 65/166 (39%)
Query: 1885 SEEL-GLPSLSSATKEEKIDGSLDKDPDSNLVV--------LEDSKGSIGDQMDCCQSG- 1934
S+E+ G+ L +++K G + K NL + + SK + +Q SG
Sbjct: 2783 SQEVAGVAPLGDEEEKKKSAGDIPKSSALNLSLDGKAERTEAQSSKATTSNQTSASASGH 2842
Query: 1935 --VVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQ---SVLEGSKETVAEAGDQMDI 1989
+ P LS P L P + +++ ++Q ++ + E +A Q +
Sbjct: 2843 PLALNPLLLSSMLYPGMLLTPG-LNLPVANQPQAANTQPTPALQPAASEAMAPQPGQSED 2901
Query: 1990 SIMPEKLPEHLDIPASLATPE--EKTEGSEKDPDSSFAAQEDPKES 2033
E E D + PE K + S + DSS ++ ED S
Sbjct: 2902 KDSDEG--EEPDEKKDTSGPEGSAKADSSSSESDSSSSSSEDSDSS 2945
Score = 53 (23.7 bits), Expect = 7.6e-55, Sum P(5) = 7.6e-55
Identities = 26/117 (22%), Positives = 47/117 (40%)
Query: 839 SGGVTPRRRGKRQALGSPP--ISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQ 896
+G P+R+ Q L P ++DV A + + LQ ++ + + + K D S
Sbjct: 2550 AGEDAPKRKELDQWLKEHPGFVADVGAFIPTANKLQFQDGRPKQKRHRCRNPNKIDINS- 2608
Query: 897 ELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTP 953
L+ + +VQ + + G P + R +Q N +P + SG P
Sbjct: 2609 -LTGEERVQIINRRNARKIGGAFAPPLKDLSRFLQENPEYGVPPEWADVVKQSGYLP 2664
Score = 53 (23.7 bits), Expect = 1.7e-53, Sum P(5) = 1.7e-53
Identities = 39/185 (21%), Positives = 64/185 (34%)
Query: 738 PSPGPDPKTNEQPQSESLNP------------SGGESTATDGNVSSIPTAPVPDSVSPSA 785
P+P P P + Q + S +P S GE A + + + TA V +PS
Sbjct: 2096 PTPLPTPLQHIQMKEASASPLLNQTELKEEPLSEGEEEAGERELK-METASVRPP-TPSG 2153
Query: 786 VKGQSGTIDPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRK-TQSGGVTP 844
V + + + + + + L + + +SR + S G +
Sbjct: 2154 VDEKDDILKVGESESRMEAARTKPLTPNSITRKQKKLSKRSRREARRESRSDSDSDGSSS 2213
Query: 845 RRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQV 904
+ S S S S S+ S +SG S S S + + S+E V
Sbjct: 2214 SSSSSSSSRSSSSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSSEGSDSEEAPKNASV 2273
Query: 905 QPCGV 909
P GV
Sbjct: 2274 VP-GV 2277
Score = 52 (23.4 bits), Expect = 5.9e-55, Sum P(3) = 5.9e-55
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 727 GLVLPAASDDIPSPGPDPKTNEQPQ-SESLNPSGGESTATDGNVSSIPTAPVPDSVSPSA 785
GL LP A+ + P QP SE++ P G+S D + P S +
Sbjct: 2864 GLNLPVANQP-QAANTQPTPALQPAASEAMAPQPGQSEDKDSDEGEEPDEKKDTSGPEGS 2922
Query: 786 VKGQSGTIDPSSA 798
K S + + S+
Sbjct: 2923 AKADSSSSESDSS 2935
Score = 52 (23.4 bits), Expect = 5.9e-55, Sum P(3) = 5.9e-55
Identities = 22/100 (22%), Positives = 38/100 (38%)
Query: 2305 SEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSD 2364
S+ +S S+ S + SS ++ G S + G +S ++ +E SD
Sbjct: 2204 SDSDSDGSSSSSSSSSSSRSSSSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSSEGSD 2263
Query: 2365 KEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGM 2404
E + S + P K F+ D +L T + M
Sbjct: 2264 SEEAPKNASVV----PGVKGFDE----DSVASLNTTQDDM 2295
Score = 51 (23.0 bits), Expect = 2.7e-53, Sum P(5) = 2.7e-53
Identities = 22/94 (23%), Positives = 38/94 (40%)
Query: 834 SRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDA 893
+RK + RR +R++ SD S G S S+ S + S S S S +
Sbjct: 2184 TRKQKKLSKRSRREARRESRSD---SD-SDGSSSSSSSSSSSRSSSSSSSSSRSGSSSSS 2239
Query: 894 LSQELSNKIQVQPCGVATSADVAGPDQKPAEQSV 927
S S+ ++S++ + ++ P SV
Sbjct: 2240 SSSSCSSGSSSSSSSSSSSSEGSDSEEAPKNASV 2273
Score = 50 (22.7 bits), Expect = 3.6e-55, Sum P(3) = 3.6e-55
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 474 PPLPSRLVTDDDLKALYEAMKIYDAPKTG-VSPNVGVKRKGEHLGALDTQHYGRGKRA 530
PP PS + DD+ + E+ +A +T ++PN + RK + L + R R+
Sbjct: 2148 PPTPSGVDEKDDILKVGESESRMEAARTKPLTPN-SITRKQKKLSKRSRREARRESRS 2204
Score = 49 (22.3 bits), Expect = 1.9e-55, Sum P(4) = 1.9e-55
Identities = 23/104 (22%), Positives = 43/104 (41%)
Query: 1232 GDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETA---P----- 1283
GD S L+ +A + E ++ N ++S L + P L ++ P
Sbjct: 2803 GDIPKSSALNLSLDGKAERTEAQSSKATTSNQTSASASGHPLALNPLLLSSMLYPGMLLT 2862
Query: 1284 PGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEK 1327
PG ++P+ + + Q P ++ P +SEA A ++K
Sbjct: 2863 PGLNLPVANQPQAANTQPTPALQ----PAASEAMAPQPGQSEDK 2902
Score = 49 (22.3 bits), Expect = 1.3e-54, Sum P(4) = 1.3e-54
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 1793 GADNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRID 1843
G D +G V PE+K KDD+ + + LV+ D A E G +D
Sbjct: 1781 GNDFIDGDVDDPEYKPAPALMKDDMEDDASSPGDLVITD-AGEG--GSMLD 1828
Score = 49 (22.3 bits), Expect = 2.1e-53, Sum P(5) = 2.1e-53
Identities = 25/106 (23%), Positives = 42/106 (39%)
Query: 940 ATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNI 999
++ SSS S S S + +S + S +SSS G A N V +
Sbjct: 2220 SSRSSSSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSSEGSDSEEAPKNASVVP--GV 2277
Query: 1000 QSFEEKACTNASKSKATLPALDSITEPYTGSTNTEGISNTIHHVPG 1045
+ F+E + + + ++ D + + + T GISN H G
Sbjct: 2278 KGFDEDSVASLNTTQ------DDMQDSHV----TNGISNPPHPFQG 2313
Score = 48 (22.0 bits), Expect = 4.6e-55, Sum P(3) = 4.6e-55
Identities = 32/168 (19%), Positives = 69/168 (41%)
Query: 1203 TVETPPPGFNSPNENPGELTGTKNDASVRGDHT-PVSGHTLASKTEALKPENKAQAGRIE 1261
T PP + +E L ++++ + T P++ +++ K + L ++ +A R E
Sbjct: 2143 TASVRPPTPSGVDEKDDILKVGESESRMEAARTKPLTPNSITRKQKKLSKRSRREARR-E 2201
Query: 1262 NIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTE 1321
+ ++S D S + + + S + ++ G + SS + +S+E
Sbjct: 2202 SRSDSDSDGSSSSSSSSSSSRSSSSSSSSSRSGSSSSSSSSSCSSGSSSS-SSSSSSSSE 2260
Query: 1322 AFEQEKVTNTSSFV---------NLADLSS--DDKTCS-VTPAMETAP 1357
+ E+ +S V ++A L++ DD S VT + P
Sbjct: 2261 GSDSEEAPKNASVVPGVKGFDEDSVASLNTTQDDMQDSHVTNGISNPP 2308
Score = 47 (21.6 bits), Expect = 6.9e-53, Sum P(5) = 6.9e-53
Identities = 26/130 (20%), Positives = 44/130 (33%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSS 977
P+ +Q +S + + DS S S S+ + S + +S + S +SS
Sbjct: 2180 PNSITRKQKKLSKRSRREARRESRSDSDSDGSSSSSSSSSSSRSSSSSSSSSRSGSSSSS 2239
Query: 978 SKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITEPYTGSTNTEGIS 1037
S S + + S E A K+ + +P + E S NT
Sbjct: 2240 SSSS-----CSSGSSSSSSSSSSSSEGSDSEEAPKNASVVPGVKGFDEDSVASLNTTQDD 2294
Query: 1038 NTIHHVPGAV 1047
HV +
Sbjct: 2295 MQDSHVTNGI 2304
Score = 47 (21.6 bits), Expect = 2.2e-52, Sum P(5) = 2.2e-52
Identities = 24/127 (18%), Positives = 57/127 (44%)
Query: 1294 NEQSRNQNNPEV-KGEETPVSSEAPAS-TEAFEQEKVTN--TSSFVNLADLSSDDKTCS- 1348
+E+ + ++ ++ K +S + A TEA + T+ TS+ + L+ + S
Sbjct: 2794 DEEEKKKSAGDIPKSSALNLSLDGKAERTEAQSSKATTSNQTSASASGHPLALNPLLLSS 2853
Query: 1349 -VTPAMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDS 1407
+ P M PG ++P+ + + T+ ++ P EA+ + ++ +G+
Sbjct: 2854 MLYPGMLLTPGLNLPVANQPQAANTQPTPALQ----PAASEAMAPQPGQSEDKDSDEGEE 2909
Query: 1408 VEKLEDT 1414
++ +DT
Sbjct: 2910 PDEKKDT 2916
Score = 45 (20.9 bits), Expect = 2.7e-54, Sum P(4) = 2.7e-54
Identities = 15/67 (22%), Positives = 28/67 (41%)
Query: 1294 NEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAM 1353
+ SR+ ++ SS + +S + +++SS +D K SV P +
Sbjct: 2218 SSSSRSSSSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSSEGSDSEEAPKNASVVPGV 2277
Query: 1354 ETAPGFD 1360
+ GFD
Sbjct: 2278 K---GFD 2281
Score = 45 (20.9 bits), Expect = 6.5e-52, Sum P(4) = 6.5e-52
Identities = 20/90 (22%), Positives = 40/90 (44%)
Query: 1877 VHVVEREKSEELG---LPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQM-DCCQ 1932
V ++ R + ++G P L ++ + + P+ VV + G + + M D
Sbjct: 2615 VQIINRRNARKIGGAFAPPLKDLSRFLQENPEYGVPPEWADVVKQS--GYLPESMFDRIL 2672
Query: 1933 SGVVVPENLSDFCQPSSSLAPWEAKIDGSS 1962
+G +VPE +S + + P A + G+S
Sbjct: 2673 TGPIVPEEVSRRGRRPKNAMPKAAMVTGAS 2702
Score = 43 (20.2 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 20/83 (24%), Positives = 35/83 (42%)
Query: 686 VPVAPGSQSASACPSTPMQPKG-RGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDP 744
+PVA Q+A+ P+ +QP Q G+ + + G P D P
Sbjct: 2867 LPVANQPQAANTQPTPALQPAASEAMAPQPGQSEDKDSDE--GEE-PDEKKDTSGPEGSA 2923
Query: 745 KTNEQP-QSESLNPSGGESTATD 766
K + +S+S + S +S ++D
Sbjct: 2924 KADSSSSESDSSSSSSEDSDSSD 2946
Score = 41 (19.5 bits), Expect = 1.3e-54, Sum P(4) = 1.3e-54
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 2298 GFSKPVGSEKESIASAVPL---DESKGPDAEVSSQTAI 2332
G S +G+ + +A PL +E K ++ +A+
Sbjct: 2774 GMSSLIGNPSQEVAGVAPLGDEEEKKKSAGDIPKSSAL 2811
Score = 41 (19.5 bits), Expect = 8.3e-54, Sum P(3) = 8.3e-54
Identities = 29/118 (24%), Positives = 43/118 (36%)
Query: 643 AMTGQSTSASAS-LPXXXXXXXXXXXAQHVMV---GI-AP-SSQPTTAFVPVAPGSQSAS 696
A T TSASAS P M+ G+ P ++QP A P Q A+
Sbjct: 2829 ATTSNQTSASASGHPLALNPLLLSSMLYPGMLLTPGLNLPVANQPQAANTQPTPALQPAA 2888
Query: 697 ACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSES 754
+ P + + GE+ P + G A +D S D ++ S+S
Sbjct: 2889 SEAMAPQPGQSEDKDSDEGEE-PDEKKDTSGPEGSAKADSSSSES-DSSSSSSEDSDS 2944
Score = 41 (19.5 bits), Expect = 8.3e-54, Sum P(3) = 8.3e-54
Identities = 24/131 (18%), Positives = 46/131 (35%)
Query: 2261 EANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESK 2320
E+ + D++G + + SSS S S S +S+ S+
Sbjct: 2201 ESRSDSDSDGSSSSSSSSSSSRSSSSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSSE 2260
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEP 2380
G D+E + + A GV + D AS +++ + + + +
Sbjct: 2261 GSDSEEAPKNASVVPGVKGF----DEDSVASLNTTQDDMQDSHVTNGISNPPHPFQGGYM 2316
Query: 2381 EAKAFEPMDVV 2391
A ++ P D V
Sbjct: 2317 LAASYWPKDRV 2327
Score = 41 (19.5 bits), Expect = 9.6e-53, Sum P(4) = 9.6e-53
Identities = 37/215 (17%), Positives = 82/215 (38%)
Query: 1082 TPTTGEAPRRRGK-KQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETAD 1140
TPT P + + K+ S + + + + + L++ + +T S+R +
Sbjct: 2095 TPTPLPTPLQHIQMKEASASPLLNQTELKEEPLSEGEEEAGERELKMETASVRPPTPSG- 2153
Query: 1141 VNDVARVMKEIFSETCSSKAKTGDSSLNE--GKDXXXXXXXXXXXXXEVAKKQSSDDKTC 1198
V++ ++K SE+ A+T + N K E SD +
Sbjct: 2154 VDEKDDILKVGESESRMEAARTKPLTPNSITRKQKKLSKRSRREARRESRSDSDSDGSSS 2213
Query: 1199 SVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALK--PENKAQ 1256
S + + + +S + G + + + + G + S + +S+ + P+N +
Sbjct: 2214 SSSSSSSSRSSSSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSSEGSDSEEAPKNASV 2273
Query: 1257 AGRI-----ENIA--NSSPDDKSLPMVPNLETAPP 1284
+ +++A N++ DD V N + PP
Sbjct: 2274 VPGVKGFDEDSVASLNTTQDDMQDSHVTNGISNPP 2308
Score = 41 (19.5 bits), Expect = 6.5e-52, Sum P(4) = 6.5e-52
Identities = 33/175 (18%), Positives = 64/175 (36%)
Query: 1345 KTCSVTPAMETAPGFDIPIEKGVEQSGT-EIDAKVKWKNTPLPGEAIVAGIEVFKPENKT 1403
K S +P + + P+ +G E++G E+ + P P +G++ K +
Sbjct: 2109 KEASASPLLNQTELKEEPLSEGEEEAGERELKMETASVRPPTP-----SGVDE-KDDILK 2162
Query: 1404 DGDSVEKLEDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEG 1463
G+S ++E + K L S + + S+ ++ S+
Sbjct: 2163 VGESESRMEA-----ARTKPLTPNSITRKQKKLSKRSRREARRESRSDSDSDGSSSSSSS 2217
Query: 1464 PSVSMKADDVADHSRE--TPILSGSPINSGTECSTVSVKTDVGNHPQNVEPTSAS 1516
S S + + SR + S S +SG+ S+ S + P +AS
Sbjct: 2218 SSSSRSSSSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSSEGSDSEEAPKNAS 2272
Score = 41 (19.5 bits), Expect = 9.3e-52, Sum P(5) = 9.3e-52
Identities = 29/146 (19%), Positives = 51/146 (34%)
Query: 1186 EVAKKQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASK 1245
E KK+S+ D S + + ++ T + AS G ++ L+S
Sbjct: 2795 EEEKKKSAGDIPKSSALNLSLDGKAERTEAQSSKATTSNQTSASASGHPLALNPLLLSSM 2854
Query: 1246 TEA---LKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGF--DIPIEKHNE--QSR 1298
L P AN+ P P PG D ++ E + +
Sbjct: 2855 LYPGMLLTPGLNLPVANQPQAANTQPTPALQPAASEAMAPQPGQSEDKDSDEGEEPDEKK 2914
Query: 1299 NQNNPEVKGEETPVSSEAPASTEAFE 1324
+ + PE + SSE+ +S+ + E
Sbjct: 2915 DTSGPEGSAKADSSSSESDSSSSSSE 2940
Score = 40 (19.1 bits), Expect = 3.2e-52, Sum P(4) = 3.2e-52
Identities = 27/129 (20%), Positives = 52/129 (40%)
Query: 1873 SHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGD---QMD 1929
S SP+ K E L + +E K++ + + P + V +D +G+ +M+
Sbjct: 2112 SASPLLNQTELKEEPLSEGEEEAGERELKMETASVRPPTPSGVDEKDDILKVGESESRME 2171
Query: 1930 CCQSGVVVPENLSDFCQPSSSLAPWEAK--------IDGSSEKDPVSSQSVLEGSKETVA 1981
++ + P +++ + S + EA+ DGSS SS S S + +
Sbjct: 2172 AARTKPLTPNSITRKQKKLSKRSRREARRESRSDSDSDGSSSSSSSSSSSRSSSSSSSSS 2231
Query: 1982 EAGDQMDIS 1990
+G S
Sbjct: 2232 RSGSSSSSS 2240
Score = 39 (18.8 bits), Expect = 2.1e-53, Sum P(5) = 2.1e-53
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1299 NQNNPEVKGEETP 1311
N+N P V E+TP
Sbjct: 2495 NRNRPPVMPEQTP 2507
Score = 38 (18.4 bits), Expect = 1.2e-51, Sum P(5) = 1.2e-51
Identities = 32/166 (19%), Positives = 62/166 (37%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
Q+ A A +GD ++ + G P+S + ++ +D + S + + G
Sbjct: 2784 QEVAGVAPLGDEEEKKKSAGDIPKSSA--LNLSLDGKAERTEAQSSKATTSNQTSASASG 2841
Query: 1890 LP-SLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQ---SGVVVPE-NLSDF 1944
P +L+ + + P NL V + + Q S + P+ S+
Sbjct: 2842 HPLALNPLLLSSMLYPGMLLTPGLNLPVANQPQAANTQPTPALQPAASEAMAPQPGQSED 2901
Query: 1945 CQPSSSLAPWEAKI----DGSSEKDPVSSQSVLEGSKETVAEAGDQ 1986
P E K +GS++ D SS+S S +++ D+
Sbjct: 2902 KDSDEGEEPDEKKDTSGPEGSAKADSSSSESDSSSSSSEDSDSSDE 2947
Score = 37 (18.1 bits), Expect = 1.7e-53, Sum P(5) = 1.7e-53
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 1093 GKKQGSGPSIPDGSAVFDAK 1112
G SG S P G + FD +
Sbjct: 2516 GMSGPSGLSTPQGPSTFDTE 2535
Score = 37 (18.1 bits), Expect = 1.5e-51, Sum P(5) = 1.5e-51
Identities = 37/198 (18%), Positives = 70/198 (35%)
Query: 1870 MGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVL---EDSKGSIGD 1926
MG+ H P ++ G+ L + + G+ ++ + + L E+ K S GD
Sbjct: 2746 MGLPHDPSNMAAMFPMMLSGMTGLPNLLGMSSLIGNPSQEV-AGVAPLGDEEEKKKSAGD 2804
Query: 1927 QMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSK---ETVAEA 1983
+ + + ++ + SS A + S+ P++ +L S +
Sbjct: 2805 IPKSSALNLSL-DGKAERTEAQSSKATTSNQTSASASGHPLALNPLLLSSMLYPGMLLTP 2863
Query: 1984 GDQMDISIMPEKLPEH----LDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGD 2039
G + ++ P+ L AS A + + +KD D E S E
Sbjct: 2864 GLNLPVANQPQAANTQPTPALQPAASEAMAPQPGQSEDKDSDEGEEPDEKKDTSGPEGSA 2923
Query: 2040 QMGVSLGGATVMEKSSED 2057
+ S + SSED
Sbjct: 2924 KADSSSSESDSSSSSSED 2941
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 625 (225.1 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
Identities = 155/402 (38%), Positives = 222/402 (55%)
Query: 20 HQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLL 79
+ KF+VLLT+YE + D+ LS I+W +++DE HR+KN +L Y +R+L
Sbjct: 718 NMKFHVLLTSYETI--NMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVL 775
Query: 80 LTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXI 139
LTGTP FN E F+ FN+ S D
Sbjct: 776 LTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEI--SKEDQ--------------- 818
Query: 140 INRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG 198
I +LH +L P +LRRLK V +P K E +VR E SA QK K + N ++ G
Sbjct: 819 IEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNG 878
Query: 199 ---RSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL---PPIVRLCGKLEMLDRLLP 252
S+ N +MEL+ CNHPYL + AE ++ K+ + +++ GK +L ++L
Sbjct: 879 GTQMSLMNVLMELKKCCNHPYLF-VKAE-LEAPKEKNGMYEGTALIKNSGKFVLLQKMLR 936
Query: 253 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 312
KLK HRVL FS MTR+LD+MED ++ YRY R+DG G R ID++N + F
Sbjct: 937 KLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQF 996
Query: 313 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 372
IFLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHR+GQK V++ RF T ++V
Sbjct: 997 IFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSV 1056
Query: 373 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
EE++ + A+ K+ + + + AG + E L+ +LR
Sbjct: 1057 EEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTE-LDDVLR 1097
Score = 62 (26.9 bits), Expect = 4.4e-55, Sum P(3) = 4.4e-55
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 1444 SEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPINS--GTECSTVSVKT 1501
SE+ +M + P+ + EG V + DD S E P + + +NS + + S
Sbjct: 1743 SENGERMEEDEPVEAEEEEG--VKQEPDDETQDSAEAPPVLSAEVNSDDSNDVPSTSAAA 1800
Query: 1502 DVGNHPQ-NVEPTSASPE 1518
V + + EP SA +
Sbjct: 1801 AVSSETAADAEPASAEDQ 1818
Score = 57 (25.1 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
Identities = 27/92 (29%), Positives = 40/92 (43%)
Query: 1990 SIMPEK-LPEHLDIPASLATPEEKTEG-SEKDPDSSFAAQEDPKESVVEAGDQMGVSLGG 2047
S+ +K L HL + A L E KT +E D + +E E + +A + G G
Sbjct: 1062 SVAKKKMLLNHLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDL-DAAEGEGSEKKG 1120
Query: 2048 ATVMEKSSEDLATPPL-SLANEEEMIEGFDND 2078
A E +D A L +N+EE G D +
Sbjct: 1121 AAAQEIVWDDAAVDALLDRSNKEETPAGEDGE 1152
Score = 54 (24.1 bits), Expect = 8.9e-55, Sum P(5) = 8.9e-55
Identities = 22/76 (28%), Positives = 33/76 (43%)
Query: 506 NVGVKRKG---EH-LGALDTQHYGRGKRAREVRSYEEQWTEEEFEK---------MCQAE 552
N GV R+G +H LG + R ++ +E Y QW+ E + Q
Sbjct: 1365 NDGVPREGLNRQHVLGRIGLLSLVR-RKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGS 1423
Query: 553 SSDSPKLKEEGLEKSL 568
S +PK KEE E+ +
Sbjct: 1424 SRSTPKPKEEPKEEPM 1439
Score = 51 (23.0 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 2171 ETVQEEEKTELSCEKQPIGSSVDDESK-GPEVEPCVQMDVRGDGI--VPET 2218
E ++E+E E E++ + DDE++ E P + +V D VP T
Sbjct: 1747 ERMEEDEPVEAE-EEEGVKQEPDDETQDSAEAPPVLSAEVNSDDSNDVPST 1796
Score = 51 (23.0 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 30/112 (26%), Positives = 47/112 (41%)
Query: 478 SRLVTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKG--EHLGALDTQHYGR-GKRARE-- 532
SRL T D+ A+ + P V+P + + G AL ++ G+R E
Sbjct: 1696 SRLTTKDE-DAIANR-SVLPPPGPFVTPILRQQMDGIQPKFAALYSKFMSENGERMEEDE 1753
Query: 533 -VRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPAVYSTE 583
V + EE+ ++E + Q + P L E V S+SA A S+E
Sbjct: 1754 PVEAEEEEGVKQEPDDETQDSAEAPPVLSAEVNSDDSNDVPSTSAAAAVSSE 1805
Score = 50 (22.7 bits), Expect = 7.2e-55, Sum P(3) = 7.2e-55
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 1757 EGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPE 1798
EG S +++++I+ + A D +LD K + G D E
Sbjct: 1112 EGEGSEKKGAAAQEIVWDDAAVDALLDRSNKEETPAGEDGEE 1153
Score = 50 (22.7 bits), Expect = 2.8e-54, Sum P(6) = 2.8e-54
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 519 LDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSD 555
++ Q G+GKR R+ +Y + ++ K Q + D
Sbjct: 1215 IELQKLGKGKRVRKQINYASENMGTDWSKQNQTQDDD 1251
Score = 49 (22.3 bits), Expect = 1.6e-54, Sum P(4) = 1.6e-54
Identities = 29/124 (23%), Positives = 45/124 (36%)
Query: 916 AGPD-QKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSE 974
AG D ++ AE + S + + + +V D D E L +
Sbjct: 1147 AGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKLLK 1206
Query: 975 NSSSKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITEPYTGSTNTE 1034
+ + I + L K V R I E T+ SK T D E Y GS N +
Sbjct: 1207 HHYEQDREIELQKLGKGKRV-RKQINYASENMGTDWSKQNQTQDD-DDDNESYRGSDNGD 1264
Query: 1035 GISN 1038
G+++
Sbjct: 1265 GLNS 1268
Score = 48 (22.0 bits), Expect = 7.7e-53, Sum P(6) = 7.7e-53
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 1287 DIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKT 1346
D P+E E+ Q P+ +ET S+EAP A +N + A S +
Sbjct: 1752 DEPVEAEEEEGVKQE-PD---DETQDSAEAPPVLSAEVNSDDSNDVPSTSAAAAVSSETA 1807
Query: 1347 CSVTPA 1352
PA
Sbjct: 1808 ADAEPA 1813
Score = 46 (21.3 bits), Expect = 8.9e-55, Sum P(5) = 8.9e-55
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 921 KPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKG 980
K EQS+ V++ + + A + QP P DL N+A + E+S+
Sbjct: 1590 KLIEQSL-VIE--EQLRRAAHANRHLQPDNVGPLAQRFADLENIAESQANIAKESSAGNR 1646
Query: 981 GVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITE 1025
+L + V+ I S + KA + S+ +T L ++TE
Sbjct: 1647 NANAVL---HKTLVQLDEILS-DMKA--DVSRLPSTFTQLATVTE 1685
Score = 45 (20.9 bits), Expect = 2.8e-54, Sum P(6) = 2.8e-54
Identities = 11/55 (20%), Positives = 21/55 (38%)
Query: 733 ASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVK 787
+S P P +PK + ++ G ++ + S APV + + K
Sbjct: 1423 SSRSTPKPKEEPKEEPMEKEDATETVNGATSEPATDAESEQNAPVDEPMDTDEAK 1477
Score = 41 (19.5 bits), Expect = 4.4e-55, Sum P(3) = 4.4e-55
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 1364 EKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSLVKE 1423
++G S TE+D ++W L E + A E E K G + +++ V D + V
Sbjct: 1082 KEGKTMSKTELDDVLRWGTEELFSEDLDAA-EGEGSEKK--GAAAQEI---VWDDAAVDA 1135
Query: 1424 LIHRS 1428
L+ RS
Sbjct: 1136 LLDRS 1140
Score = 41 (19.5 bits), Expect = 3.7e-54, Sum P(5) = 3.7e-54
Identities = 13/61 (21%), Positives = 24/61 (39%)
Query: 525 GRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKS--LPTVVSSSAPAVYST 582
G G + + E W + + + + + E+G EK+ +SS A Y T
Sbjct: 1113 GEGSEKKGAAAQEIVWDDAAVDALLDRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQT 1172
Query: 583 E 583
+
Sbjct: 1173 K 1173
Score = 40 (19.1 bits), Expect = 9.1e-53, Sum P(4) = 9.1e-53
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFE 2386
E +G S A + E + PV + E+KEP+ + E
Sbjct: 1446 ETVNGATSEPATDAESEQ---NAPVDEPMDTDEAKEPKEEPIE 1485
Score = 38 (18.4 bits), Expect = 8.9e-55, Sum P(5) = 8.9e-55
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 436 RSESEIDVFESVDKQRREEEMATWRKLIR 464
+ E E + E + + +E + W KL++
Sbjct: 1178 QEEEEEEETEVIKEDEKEPDPDYWEKLLK 1206
Score = 38 (18.4 bits), Expect = 1.6e-54, Sum P(4) = 1.6e-54
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 1364 EKGVEQSGTEIDAKVKWKNTPLPGEAIV 1391
E G E +G++I AK + L +++V
Sbjct: 1570 EVGAEATGSDIKAKFMQRRFKLIEQSLV 1597
Score = 38 (18.4 bits), Expect = 1.5e-52, Sum P(4) = 1.5e-52
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 2288 SSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSI 2340
++D E E+ +P+ +++ P++ K A S + I GG +
Sbjct: 1456 ATDAESEQNAPVDEPMDTDEAKEPKEEPIETEKPRAARPSFKFNICDGGFTEL 1508
Score = 37 (18.1 bits), Expect = 1.0e-51, Sum P(6) = 1.0e-51
Identities = 25/120 (20%), Positives = 43/120 (35%)
Query: 1207 PPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANS 1266
PPPG P P + + D ++ + ++ E ++ + +A E +
Sbjct: 1713 PPPG---PFVTP--ILRQQMDG-IQPKFAALYSKFMSENGERMEEDEPVEAEEEEGV-KQ 1765
Query: 1267 SPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQE 1326
PDD++ + APP + S + N+ VSSE A E E
Sbjct: 1766 EPDDET----QDSAEAPPVLSAEVN-----SDDSNDVPSTSAAAAVSSETAADAEPASAE 1816
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 625 (225.1 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
Identities = 155/402 (38%), Positives = 222/402 (55%)
Query: 20 HQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLL 79
+ KF+VLLT+YE + D+ LS I+W +++DE HR+KN +L Y +R+L
Sbjct: 718 NMKFHVLLTSYETI--NMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVL 775
Query: 80 LTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXI 139
LTGTP FN E F+ FN+ S D
Sbjct: 776 LTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEI--SKEDQ--------------- 818
Query: 140 INRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG 198
I +LH +L P +LRRLK V +P K E +VR E SA QK K + N ++ G
Sbjct: 819 IEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNG 878
Query: 199 ---RSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL---PPIVRLCGKLEMLDRLLP 252
S+ N +MEL+ CNHPYL + AE ++ K+ + +++ GK +L ++L
Sbjct: 879 GTQMSLMNVLMELKKCCNHPYLF-VKAE-LEAPKEKNGMYEGTALIKNSGKFVLLQKMLR 936
Query: 253 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 312
KLK HRVL FS MTR+LD+MED ++ YRY R+DG G R ID++N + F
Sbjct: 937 KLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQF 996
Query: 313 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 372
IFLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHR+GQK V++ RF T ++V
Sbjct: 997 IFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSV 1056
Query: 373 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
EE++ + A+ K+ + + + AG + E L+ +LR
Sbjct: 1057 EEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTE-LDDVLR 1097
Score = 62 (26.9 bits), Expect = 4.4e-55, Sum P(3) = 4.4e-55
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 1444 SEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPINS--GTECSTVSVKT 1501
SE+ +M + P+ + EG V + DD S E P + + +NS + + S
Sbjct: 1743 SENGERMEEDEPVEAEEEEG--VKQEPDDETQDSAEAPPVLSAEVNSDDSNDVPSTSAAA 1800
Query: 1502 DVGNHPQ-NVEPTSASPE 1518
V + + EP SA +
Sbjct: 1801 AVSSETAADAEPASAEDQ 1818
Score = 57 (25.1 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
Identities = 27/92 (29%), Positives = 40/92 (43%)
Query: 1990 SIMPEK-LPEHLDIPASLATPEEKTEG-SEKDPDSSFAAQEDPKESVVEAGDQMGVSLGG 2047
S+ +K L HL + A L E KT +E D + +E E + +A + G G
Sbjct: 1062 SVAKKKMLLNHLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDL-DAAEGEGSEKKG 1120
Query: 2048 ATVMEKSSEDLATPPL-SLANEEEMIEGFDND 2078
A E +D A L +N+EE G D +
Sbjct: 1121 AAAQEIVWDDAAVDALLDRSNKEETPAGEDGE 1152
Score = 54 (24.1 bits), Expect = 8.9e-55, Sum P(5) = 8.9e-55
Identities = 22/76 (28%), Positives = 33/76 (43%)
Query: 506 NVGVKRKG---EH-LGALDTQHYGRGKRAREVRSYEEQWTEEEFEK---------MCQAE 552
N GV R+G +H LG + R ++ +E Y QW+ E + Q
Sbjct: 1365 NDGVPREGLNRQHVLGRIGLLSLVR-RKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGS 1423
Query: 553 SSDSPKLKEEGLEKSL 568
S +PK KEE E+ +
Sbjct: 1424 SRSTPKPKEEPKEEPM 1439
Score = 51 (23.0 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 2171 ETVQEEEKTELSCEKQPIGSSVDDESK-GPEVEPCVQMDVRGDGI--VPET 2218
E ++E+E E E++ + DDE++ E P + +V D VP T
Sbjct: 1747 ERMEEDEPVEAE-EEEGVKQEPDDETQDSAEAPPVLSAEVNSDDSNDVPST 1796
Score = 51 (23.0 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 30/112 (26%), Positives = 47/112 (41%)
Query: 478 SRLVTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKG--EHLGALDTQHYGR-GKRARE-- 532
SRL T D+ A+ + P V+P + + G AL ++ G+R E
Sbjct: 1696 SRLTTKDE-DAIANR-SVLPPPGPFVTPILRQQMDGIQPKFAALYSKFMSENGERMEEDE 1753
Query: 533 -VRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPAVYSTE 583
V + EE+ ++E + Q + P L E V S+SA A S+E
Sbjct: 1754 PVEAEEEEGVKQEPDDETQDSAEAPPVLSAEVNSDDSNDVPSTSAAAAVSSE 1805
Score = 50 (22.7 bits), Expect = 7.2e-55, Sum P(3) = 7.2e-55
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 1757 EGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPE 1798
EG S +++++I+ + A D +LD K + G D E
Sbjct: 1112 EGEGSEKKGAAAQEIVWDDAAVDALLDRSNKEETPAGEDGEE 1153
Score = 50 (22.7 bits), Expect = 2.8e-54, Sum P(6) = 2.8e-54
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 519 LDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSD 555
++ Q G+GKR R+ +Y + ++ K Q + D
Sbjct: 1215 IELQKLGKGKRVRKQINYASENMGTDWSKQNQTQDDD 1251
Score = 49 (22.3 bits), Expect = 1.6e-54, Sum P(4) = 1.6e-54
Identities = 29/124 (23%), Positives = 45/124 (36%)
Query: 916 AGPD-QKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSE 974
AG D ++ AE + S + + + +V D D E L +
Sbjct: 1147 AGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKLLK 1206
Query: 975 NSSSKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITEPYTGSTNTE 1034
+ + I + L K V R I E T+ SK T D E Y GS N +
Sbjct: 1207 HHYEQDREIELQKLGKGKRV-RKQINYASENMGTDWSKQNQTQDD-DDDNESYRGSDNGD 1264
Query: 1035 GISN 1038
G+++
Sbjct: 1265 GLNS 1268
Score = 48 (22.0 bits), Expect = 7.7e-53, Sum P(6) = 7.7e-53
Identities = 18/66 (27%), Positives = 26/66 (39%)
Query: 1287 DIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKT 1346
D P+E E+ Q P+ +ET S+EAP A +N + A S +
Sbjct: 1752 DEPVEAEEEEGVKQE-PD---DETQDSAEAPPVLSAEVNSDDSNDVPSTSAAAAVSSETA 1807
Query: 1347 CSVTPA 1352
PA
Sbjct: 1808 ADAEPA 1813
Score = 46 (21.3 bits), Expect = 8.9e-55, Sum P(5) = 8.9e-55
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 921 KPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKG 980
K EQS+ V++ + + A + QP P DL N+A + E+S+
Sbjct: 1590 KLIEQSL-VIE--EQLRRAAHANRHLQPDNVGPLAQRFADLENIAESQANIAKESSAGNR 1646
Query: 981 GVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITE 1025
+L + V+ I S + KA + S+ +T L ++TE
Sbjct: 1647 NANAVL---HKTLVQLDEILS-DMKA--DVSRLPSTFTQLATVTE 1685
Score = 45 (20.9 bits), Expect = 2.8e-54, Sum P(6) = 2.8e-54
Identities = 11/55 (20%), Positives = 21/55 (38%)
Query: 733 ASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVK 787
+S P P +PK + ++ G ++ + S APV + + K
Sbjct: 1423 SSRSTPKPKEEPKEEPMEKEDATETVNGATSEPATDAESEQNAPVDEPMDTDEAK 1477
Score = 41 (19.5 bits), Expect = 4.4e-55, Sum P(3) = 4.4e-55
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 1364 EKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDDHSLVKE 1423
++G S TE+D ++W L E + A E E K G + +++ V D + V
Sbjct: 1082 KEGKTMSKTELDDVLRWGTEELFSEDLDAA-EGEGSEKK--GAAAQEI---VWDDAAVDA 1135
Query: 1424 LIHRS 1428
L+ RS
Sbjct: 1136 LLDRS 1140
Score = 41 (19.5 bits), Expect = 3.7e-54, Sum P(5) = 3.7e-54
Identities = 13/61 (21%), Positives = 24/61 (39%)
Query: 525 GRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKS--LPTVVSSSAPAVYST 582
G G + + E W + + + + + E+G EK+ +SS A Y T
Sbjct: 1113 GEGSEKKGAAAQEIVWDDAAVDALLDRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQT 1172
Query: 583 E 583
+
Sbjct: 1173 K 1173
Score = 40 (19.1 bits), Expect = 9.1e-53, Sum P(4) = 9.1e-53
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFE 2386
E +G S A + E + PV + E+KEP+ + E
Sbjct: 1446 ETVNGATSEPATDAESEQ---NAPVDEPMDTDEAKEPKEEPIE 1485
Score = 38 (18.4 bits), Expect = 8.9e-55, Sum P(5) = 8.9e-55
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 436 RSESEIDVFESVDKQRREEEMATWRKLIR 464
+ E E + E + + +E + W KL++
Sbjct: 1178 QEEEEEEETEVIKEDEKEPDPDYWEKLLK 1206
Score = 38 (18.4 bits), Expect = 1.6e-54, Sum P(4) = 1.6e-54
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 1364 EKGVEQSGTEIDAKVKWKNTPLPGEAIV 1391
E G E +G++I AK + L +++V
Sbjct: 1570 EVGAEATGSDIKAKFMQRRFKLIEQSLV 1597
Score = 38 (18.4 bits), Expect = 1.5e-52, Sum P(4) = 1.5e-52
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 2288 SSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSI 2340
++D E E+ +P+ +++ P++ K A S + I GG +
Sbjct: 1456 ATDAESEQNAPVDEPMDTDEAKEPKEEPIETEKPRAARPSFKFNICDGGFTEL 1508
Score = 37 (18.1 bits), Expect = 1.0e-51, Sum P(6) = 1.0e-51
Identities = 25/120 (20%), Positives = 43/120 (35%)
Query: 1207 PPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANS 1266
PPPG P P + + D ++ + ++ E ++ + +A E +
Sbjct: 1713 PPPG---PFVTP--ILRQQMDG-IQPKFAALYSKFMSENGERMEEDEPVEAEEEEGV-KQ 1765
Query: 1267 SPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQE 1326
PDD++ + APP + S + N+ VSSE A E E
Sbjct: 1766 EPDDET----QDSAEAPPVLSAEVN-----SDDSNDVPSTSAAAAVSSETAADAEPASAE 1816
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 643 (231.4 bits), Expect = 4.7e-55, Sum P(3) = 4.7e-55
Identities = 155/408 (37%), Positives = 226/408 (55%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++ +K V KF+VLLT+YE + D+ L I+W +++DE HR+KN K L
Sbjct: 724 VFRMKKEVQIKFHVLLTSYELITI--DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 781
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
Y+ ++LLLTGTP FN+ E F + F D S +
Sbjct: 782 YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ-- 832
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVE 187
I +LH +L P +LRRLK V +P K E +VR E S Y K ++ R
Sbjct: 833 --------IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 884
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEM 246
E L S G S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +
Sbjct: 885 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 944
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN
Sbjct: 945 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1004
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
+ F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF
Sbjct: 1005 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1064
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
T +VEE++ A+ K+ + + + G + S ++ L+ +L+
Sbjct: 1065 VTRASVEERITQVAKRKMMLTHLVVRPGL--GSKSGSMTKQELDDILK 1110
Score = 45 (20.9 bits), Expect = 4.7e-55, Sum P(3) = 4.7e-55
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 1395 EVFKPENKTDGDSVEKLEDTVDDHSLVKELIHRSPDHSD 1433
E+FK + + D VE D + + +L+ R+ D +D
Sbjct: 1115 ELFKDDVEGDNKDVEDSSVIHYDDAAISKLLDRNQDATD 1153
Score = 45 (20.9 bits), Expect = 1.6e-54, Sum P(5) = 1.6e-54
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSEKDP 2020
+ ++ E LPE I L T + K E EK+P
Sbjct: 1520 VGLLKEVLPEKEKILDKLETDDTKAE--EKEP 1549
Score = 45 (20.9 bits), Expect = 1.6e-54, Sum P(5) = 1.6e-54
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 747 NEQPQSESLNPSGGESTATDGNVSSIPTAPVPDS 780
N + + L P G E +SS P PVP S
Sbjct: 1400 NGKYSTPDLIPEGPEGKKPGEVISSDPNTPVPAS 1433
Score = 45 (20.9 bits), Expect = 1.6e-54, Sum P(5) = 1.6e-54
Identities = 28/126 (22%), Positives = 49/126 (38%)
Query: 445 ESVDKQRREEEMATWRKLIRGLGTDGE-PLPPLPSRLVTDDDLKALYEAMK---IYDAPK 500
E D + R E + R+ R L +D + PLPPL +R+ + ++ + + +
Sbjct: 1258 EDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMR 1317
Query: 501 TGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLK 560
G+ P H D RGK +E R+Y + E + + +
Sbjct: 1318 WGMPPQDAFN---SHWLVRDL----RGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVP 1370
Query: 561 EEGLEK 566
EGL +
Sbjct: 1371 REGLSR 1376
Score = 42 (19.8 bits), Expect = 2.1e-53, Sum P(6) = 2.1e-53
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 522 QHYGRGKRAREVRSY------EEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
++ G+GKR R+ +Y +++W +E + Q+E S + ++E E+
Sbjct: 1216 RNLGKGKRIRKQVNYNDASQEDQEWQDELSDN--QSEYSIGSEDEDEDFEE 1264
Score = 42 (19.8 bits), Expect = 4.2e-53, Sum P(6) = 4.2e-53
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 2298 GFSKPVGSEKESIASAVPLDESKGPDAE 2325
G K V EKE I + D++K + E
Sbjct: 1521 GLLKEVLPEKEKILDKLETDDTKAEEKE 1548
Score = 40 (19.1 bits), Expect = 1.6e-54, Sum P(5) = 1.6e-54
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 1201 TPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRI 1260
TP +P +P PG G N+ ++ G V G K E+ + +A+ R+
Sbjct: 1428 TPVPASPAHLLPAPPGLPG--LGA-NEQALDG----VEGE---DKHESSDGKERAREERL 1477
Query: 1261 ENIANSSPDDKSLP 1274
E + P + LP
Sbjct: 1478 EEAEKAQPSPEQLP 1491
Score = 40 (19.1 bits), Expect = 4.3e-53, Sum P(5) = 4.3e-53
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSE-KDPDSSFAAQEDPKESV 2034
+S++ +K+ E + +TP+ EG E K P ++ DP V
Sbjct: 1386 MSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPGEVISS--DPNTPV 1430
Score = 37 (18.1 bits), Expect = 4.7e-55, Sum P(3) = 4.7e-55
Identities = 8/45 (17%), Positives = 23/45 (51%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E +D + + E+++E ++ P G S + ++ ++ +P+
Sbjct: 1243 ELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPL 1287
Score = 37 (18.1 bits), Expect = 2.1e-53, Sum P(6) = 2.1e-53
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 704 QPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDI 737
+P+G+ R QS Q+ R K + +L +I
Sbjct: 1265 RPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNI 1298
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 617 (222.3 bits), Expect = 5.6e-55, Sum P(2) = 5.6e-55
Identities = 150/353 (42%), Positives = 201/353 (56%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 591 DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH 650
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F EDF + K E NG S LH+VL PF+LRR+K
Sbjct: 651 FIMPEKFEFWEDFEEDHGKGRE-NGYQS-----------------LHKVLEPFLLRRVKK 692
Query: 158 KVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNSKGRSVHNSVMELRNI 211
VE LP K+E+++R E SA Y K ++ R + L G+ G++ G N VMEL+
Sbjct: 693 DVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG--FLNIVMELKKC 750
Query: 212 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 271
CNH YL + EE + + L ++R GKL +LD+LL +L+ +RVL FS M R+L
Sbjct: 751 CNHCYLIK-PPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRML 809
Query: 272 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 331
D++ +YLT K Y + RLDG G R +D FN S F FLLS RAGG+G+NL +AD
Sbjct: 810 DILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD 869
Query: 332 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
TV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++ A+ K+
Sbjct: 870 TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 922
Score = 186 (70.5 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 64/198 (32%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S+HRLL+T
Sbjct: 577 KFNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 634
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F EDF + K E NG S ++
Sbjct: 635 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS-----LHKVLEPFLLR 688
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L G+ G++ G
Sbjct: 689 RV----KKDVEKSLPAKVEQILRVEMSALQK----QYYKWILTRNYKALAKGTRGSTSG- 739
Query: 200 SVHNSVMELRNICNHPYL 217
N VMEL+ CNH YL
Sbjct: 740 -FLNIVMELKKCCNHCYL 756
Score = 54 (24.1 bits), Expect = 5.6e-55, Sum P(2) = 5.6e-55
Identities = 47/190 (24%), Positives = 74/190 (38%)
Query: 1759 GPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPG-ADNP-EGGVIVPEHKSENMGEKDD 1816
G A L K + + KA + DEHG P +DNP E G + + ++ +K
Sbjct: 1323 GGEEAKLKKRKPRVKKENKAPRLKDEHGIEFSSPRHSDNPSEEGEVKDDGLEKSPMKKKQ 1382
Query: 1817 ISSEHAFGSSLVL---QDKASEAEIGDRID--EPQVDGFSPRSMSGVVDELVDEAGDHMG 1871
E+ + +DK + E D E + G +S S + H+
Sbjct: 1383 KKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKKPKGGDAKSSS---KSKRSQGPVHIT 1439
Query: 1872 VSHSPVHVVEREKSEELGLPSLSSATKE----EKIDGSLDKDPDSNLVV---LEDSKG-- 1922
PV + E E ++L + S + +K LDK PD L V LE ++
Sbjct: 1440 AGSEPVPIGEDE-DDDLDQETFSICKERMRPVKKALKQLDK-PDKGLNVQEQLEHTRNCL 1497
Query: 1923 -SIGDQMDCC 1931
IGD++ C
Sbjct: 1498 LKIGDRIAEC 1507
Score = 54 (24.1 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFST----MTRLLDVMEDYLTFKQYRYLRLDGHTSGGDR 297
G E++ + P+LK TD ++L T + L DYL + L +G +GG+
Sbjct: 1268 GNWELI-KTDPELKLTDKKILPVETDKKPQGKQLQTRADYLLKLLRKSLEKEGAVTGGEE 1326
Query: 298 GAL 300
L
Sbjct: 1327 AKL 1329
Score = 47 (21.6 bits), Expect = 8.2e-52, Sum P(4) = 8.2e-52
Identities = 19/87 (21%), Positives = 40/87 (45%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
+++ S + + + + +V F+ ++E + D + V E E+ +EL
Sbjct: 995 ENEVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELE 1054
Query: 1890 ----LPSLSSATKEEKIDGSLDKDPDS 1912
LP + S+TK+ + + S D D +S
Sbjct: 1055 EIYMLPRIRSSTKKAQTNDS-DSDTES 1080
Score = 45 (20.9 bits), Expect = 8.2e-52, Sum P(4) = 8.2e-52
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 1997 PEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKES 2033
P H D P+ E K +G EK P +++ KE+
Sbjct: 1356 PRHSDNPSEEG--EVKDDGLEKSPMKKKQKKKENKEN 1390
Score = 40 (19.1 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 544 EFEKMCQAES-SDSPKLKEEGLEKS 567
EF +++ S+ ++K++GLEKS
Sbjct: 1352 EFSSPRHSDNPSEEGEVKDDGLEKS 1376
Score = 37 (18.1 bits), Expect = 8.2e-52, Sum P(4) = 8.2e-52
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 2174 QEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVP 2216
+E +K++ EK+P G SK + V + G VP
Sbjct: 1405 KERKKSKDKKEKKPKGGDAKSSSKSKRSQGPVHITA-GSEPVP 1446
Score = 37 (18.1 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1220 ELTGTKNDASVRGDHTPVSGH 1240
E +G+ D+ + HTP + H
Sbjct: 1574 EASGSSRDSLMSQSHTPHNLH 1594
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 617 (222.3 bits), Expect = 5.7e-55, Sum P(2) = 5.7e-55
Identities = 150/353 (42%), Positives = 201/353 (56%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 604 DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH 663
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F EDF + K E NG S LH+VL PF+LRR+K
Sbjct: 664 FIMPEKFEFWEDFEEDHGKGRE-NGYQS-----------------LHKVLEPFLLRRVKK 705
Query: 158 KVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNSKGRSVHNSVMELRNI 211
VE LP K+E+++R E SA Y K ++ R + L G+ G++ G N VMEL+
Sbjct: 706 DVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG--FLNIVMELKKC 763
Query: 212 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 271
CNH YL + EE + + L ++R GKL +LD+LL +L+ +RVL FS M R+L
Sbjct: 764 CNHCYLIK-PPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRML 822
Query: 272 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 331
D++ +YLT K Y + RLDG G R +D FN S F FLLS RAGG+G+NL +AD
Sbjct: 823 DILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD 882
Query: 332 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
TV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++ A+ K+
Sbjct: 883 TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 935
Score = 186 (70.5 bits), Expect = 2.0e-08, Sum P(4) = 2.0e-08
Identities = 64/198 (32%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S+HRLL+T
Sbjct: 590 KFNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 647
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F EDF + K E NG S ++
Sbjct: 648 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS-----LHKVLEPFLLR 701
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L G+ G++ G
Sbjct: 702 RV----KKDVEKSLPAKVEQILRVEMSALQK----QYYKWILTRNYKALAKGTRGSTSG- 752
Query: 200 SVHNSVMELRNICNHPYL 217
N VMEL+ CNH YL
Sbjct: 753 -FLNIVMELKKCCNHCYL 769
Score = 55 (24.4 bits), Expect = 5.7e-55, Sum P(2) = 5.7e-55
Identities = 47/191 (24%), Positives = 77/191 (40%)
Query: 1759 GPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPG-ADNP-EGGVIVPEHKSENMGEKDD 1816
G A L K + + KA + DEHG P +DNP E G + + ++ +K
Sbjct: 1336 GGEEAKLKKRKPRVKKENKAPRLKDEHGIEFSSPRHSDNPSEEGEVKDDGLEKSPMKKKQ 1395
Query: 1817 ISSEHAFGSSLVL---QDKASEAE---IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHM 1870
E+ + +DK + E D+ ++P+ G +S S + H+
Sbjct: 1396 KKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKPK--GGDAKSSS---KSKRSQGPVHI 1450
Query: 1871 GVSHSPVHVVEREKSEELGLPSLSSATKE----EKIDGSLDKDPDSNLVV---LEDSKG- 1922
PV + E E ++L + S + +K LDK PD L V LE ++
Sbjct: 1451 TAGSEPVPIGEDE-DDDLDQETFSICKERMRPVKKALKQLDK-PDKGLNVQEQLEHTRNC 1508
Query: 1923 --SIGDQMDCC 1931
IGD++ C
Sbjct: 1509 LLKIGDRIAEC 1519
Score = 54 (24.1 bits), Expect = 2.0e-08, Sum P(4) = 2.0e-08
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFST----MTRLLDVMEDYLTFKQYRYLRLDGHTSGGDR 297
G E++ + P+LK TD ++L T + L DYL + L +G +GG+
Sbjct: 1281 GNWELI-KTDPELKLTDKKILPVETDKKPQGKQLQTRADYLLKLLRKSLEKEGAVTGGEE 1339
Query: 298 GAL 300
L
Sbjct: 1340 AKL 1342
Score = 51 (23.0 bits), Expect = 4.8e-53, Sum P(4) = 4.8e-53
Identities = 23/104 (22%), Positives = 44/104 (42%)
Query: 2293 EEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGG------GVVSIPVPEEA 2346
+EK K +KE S ++ KG DA+ SS++ G G +P+ E+
Sbjct: 1404 KEKQMSSRKDKEGDKERKKSKDKKEKPKGGDAKSSSKSKRSQGPVHITAGSEPVPIGEDE 1463
Query: 2347 DGPASFLAAEEEKNECSDK-EPVGSSVSQIESKEPEAKAFEPMD 2389
D +E + C ++ PV ++ Q++ + E ++
Sbjct: 1464 DDDLD----QETFSICKERMRPVKKALKQLDKPDKGLNVQEQLE 1503
Score = 47 (21.6 bits), Expect = 4.8e-53, Sum P(4) = 4.8e-53
Identities = 19/87 (21%), Positives = 40/87 (45%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
+++ S + + + + +V F+ ++E + D + V E E+ +EL
Sbjct: 1008 ENEVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELE 1067
Query: 1890 ----LPSLSSATKEEKIDGSLDKDPDS 1912
LP + S+TK+ + + S D D +S
Sbjct: 1068 EIYMLPRIRSSTKKAQTNDS-DSDTES 1093
Score = 46 (21.3 bits), Expect = 5.1e-54, Sum P(2) = 5.1e-54
Identities = 31/148 (20%), Positives = 52/148 (35%)
Query: 1211 FNSP--NENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSP 1268
F+SP ++NP E K+D + +P+ K + K ENK + +
Sbjct: 1366 FSSPRHSDNPSEEGEVKDDGL---EKSPM-------KKKQKKKENKENKEKQMSSRKDKE 1415
Query: 1269 DDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAP--ASTEAFEQE 1326
DK + + P G D +++S+ + E P+ + E F
Sbjct: 1416 GDKERKKSKDKKEKPKGGDAKSSSKSKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSIC 1475
Query: 1327 KVTNTSSFVNLADLSSDDKTCSVTPAME 1354
K L L DK +V +E
Sbjct: 1476 KERMRPVKKALKQLDKPDKGLNVQEQLE 1503
Score = 45 (20.9 bits), Expect = 4.8e-53, Sum P(4) = 4.8e-53
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 1997 PEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKES 2033
P H D P+ E K +G EK P +++ KE+
Sbjct: 1369 PRHSDNPSEEG--EVKDDGLEKSPMKKKQKKKENKEN 1403
Score = 40 (19.1 bits), Expect = 5.8e-53, Sum P(3) = 5.8e-53
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 544 EFEKMCQAES-SDSPKLKEEGLEKS 567
EF +++ S+ ++K++GLEKS
Sbjct: 1365 EFSSPRHSDNPSEEGEVKDDGLEKS 1389
Score = 37 (18.1 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1220 ELTGTKNDASVRGDHTPVSGH 1240
E +G+ D+ + HTP + H
Sbjct: 1585 EASGSSRDSLMSQSHTPHNLH 1605
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 615 (221.5 bits), Expect = 7.6e-55, Sum P(2) = 7.6e-55
Identities = 159/393 (40%), Positives = 217/393 (55%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 604 DKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH 663
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F EDF + K E NG S LH+VL PF+LRR+K
Sbjct: 664 FIMPEKFEFWEDFEEDHGKGRE-NGYQS-----------------LHKVLEPFLLRRVKK 705
Query: 158 KVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNSKGRSVHNSVMELRNI 211
VE LP K+E+++R E SA Y K ++ R + L G+ G++ G N VMEL+
Sbjct: 706 DVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSG--FLNIVMELKKC 763
Query: 212 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 271
CNH YL + EE + L ++R GKL +LD+LL +L+ +RVL FS M R+L
Sbjct: 764 CNHCYLIK-PPEENERENGIETLQSLIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRML 822
Query: 272 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 331
D++ +YLT K Y + RLDG G R +D FN S F FLLS RAGG+G+NL +AD
Sbjct: 823 DILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD 882
Query: 332 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSI 391
TV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++ A+ K+ + + I
Sbjct: 883 TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVI 942
Query: 392 ----TAG--FFDNNTSAED----RREYLESLLR 414
T G DNN+ + +E L ++L+
Sbjct: 943 QRMDTTGRTVLDNNSGRSNSNPFNKEELTAILK 975
Score = 187 (70.9 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 66/208 (31%), Positives = 97/208 (46%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++S+ K + KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L
Sbjct: 582 IHSQSKRL--KFNALITTYEILLK--DKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLID 637
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
++S+HRLL+TGTP F EDF + K E NG S
Sbjct: 638 FKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS-----L 691
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL- 190
++ R+ + V + L KVE L ++ L + Y K ++ R + L
Sbjct: 692 HKVLEPFLLRRV----KKDVEKSLPAKVEQILRVEMSALQK----QYYKWILTRNYKALS 743
Query: 191 -GSIGNSKGRSVHNSVMELRNICNHPYL 217
G+ G++ G N VMEL+ CNH YL
Sbjct: 744 KGTRGSTSG--FLNIVMELKKCCNHCYL 769
Score = 55 (24.4 bits), Expect = 7.6e-55, Sum P(2) = 7.6e-55
Identities = 21/87 (24%), Positives = 36/87 (41%)
Query: 1242 LASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFD-IPIEKHNEQSRNQ 1300
L + +K ENKA + E+ SP S E G D P++K ++ N+
Sbjct: 1343 LKKRKPRVKKENKAPKVKDEHGNELSPPRHSDNQSEEGEVKDDGLDKSPVKKKQKKKENK 1402
Query: 1301 NNPEVKGEETPVSSEAPASTEAFEQEK 1327
N E K + E+ + +++K
Sbjct: 1403 ENKE-KQTSSKKEKESDKEKKKTKEKK 1428
Score = 49 (22.3 bits), Expect = 2.6e-53, Sum P(3) = 2.6e-53
Identities = 22/81 (27%), Positives = 33/81 (40%)
Query: 1755 NMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSENMGEK 1814
NM+ G L K + + KA V DEHG +L P P H S+N E+
Sbjct: 1334 NMKDGEEGKL-KKRKPRVKKENKAPKVKDEHGN-ELSP-----------PRH-SDNQSEE 1379
Query: 1815 DDISSEHAFGSSLVLQDKASE 1835
++ + S + + K E
Sbjct: 1380 GEVKDDGLDKSPVKKKQKKKE 1400
Score = 46 (21.3 bits), Expect = 6.7e-54, Sum P(2) = 6.7e-54
Identities = 22/117 (18%), Positives = 42/117 (35%)
Query: 829 QTKGQSRKTQSGG-VTPRRRGKRQAL-GSPPISDVSAGPESKSNLQSENNSGGLRLSKSV 886
+ K K + G ++P R Q+ G + P K + EN + + S
Sbjct: 1353 ENKAPKVKDEHGNELSPPRHSDNQSEEGEVKDDGLDKSPVKKKQKKKENKENKEKQTSSK 1412
Query: 887 SMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHD 943
+ D ++ K + G A S G K ++ V + ++P+ + D
Sbjct: 1413 KEKESDKEKKKTKEKKEKPKGGEAKS----GSKGKRSQGPVHITAGSEPVPIGEDED 1465
Score = 46 (21.3 bits), Expect = 2.6e-53, Sum P(3) = 2.6e-53
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 2356 EEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMG--GP------ 2407
+++K +KE SS + ES + + K E + G A ++ S+G GP
Sbjct: 1396 QKKKENKENKEKQTSSKKEKESDKEKKKTKEKKEKPKGGEA-KSGSKGKRSQGPVHITAG 1454
Query: 2408 SPPLVIAEDKTENEIEED 2425
S P+ I ED+ +++++++
Sbjct: 1455 SEPVPIGEDE-DDDLDQE 1471
Score = 44 (20.5 bits), Expect = 8.8e-53, Sum P(3) = 8.8e-53
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 1881 EREKS-EELG-LPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMD 1929
ER+K EE+ LP + S+TK+ + + S + D ++ L+ S GS + D
Sbjct: 1063 ERQKELEEIYMLPRIRSSTKKAQTNDS-ESDAETKRR-LQRSSGSESETDD 1111
Score = 41 (19.5 bits), Expect = 2.9e-52, Sum P(3) = 2.9e-52
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 2357 EEKNECSDKEPVGSSVSQIESKEPEAK 2383
E K++ DK PV + E+KE + K
Sbjct: 1381 EVKDDGLDKSPVKKKQKKKENKENKEK 1407
Score = 40 (19.1 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 1871 GVSHSPVHVVEREKSEELGLPSLSSATKEEKID 1903
G+ SPV +++K + +S+ KE++ D
Sbjct: 1386 GLDKSPVKKKQKKKENKENKEKQTSSKKEKESD 1418
Score = 39 (18.8 bits), Expect = 1.4e-52, Sum P(3) = 1.4e-52
Identities = 22/117 (18%), Positives = 51/117 (43%)
Query: 2008 TPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLAN 2067
T +K + S+K+ + +E PK ++G + G G + SE + P+
Sbjct: 1409 TSSKKEKESDKEKKKTKEKKEKPKGGEAKSGSK-GKRSQGPVHITAGSEPV---PIGEDE 1464
Query: 2068 EEEMI-EGFD-----NDPTGISMAVMDSKECAAEAADQMCVSEGCVV-VTEKLSEDL 2117
++++ E F P ++ +D + +Q+ + C++ + +++SE L
Sbjct: 1465 DDDLDQETFSICKERMRPVKKALKQLDKPDKGLTVQEQLEHTRNCLLKIGDRISECL 1521
Score = 38 (18.4 bits), Expect = 4.7e-53, Sum P(2) = 4.7e-53
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 519 LDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEE 562
LD + ++ +E + +E+ T + EK E + + KE+
Sbjct: 1387 LDKSPVKKKQKKKENKENKEKQTSSKKEKESDKEKKKTKEKKEK 1430
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 617 (222.3 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 150/353 (42%), Positives = 201/353 (56%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 602 DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH 661
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F EDF + K E NG S LH+VL PF+LRR+K
Sbjct: 662 FIMPEKFEFWEDFEEDHGKGRE-NGYQS-----------------LHKVLEPFLLRRVKK 703
Query: 158 KVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNSKGRSVHNSVMELRNI 211
VE LP K+E+++R E SA Y K ++ R + L G+ G++ G N VMEL+
Sbjct: 704 DVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG--FLNIVMELKKC 761
Query: 212 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 271
CNH YL + EE + + L ++R GKL +LD+LL +L+ +RVL FS M R+L
Sbjct: 762 CNHCYLIK-PPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRML 820
Query: 272 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 331
D++ +YLT K Y + RLDG G R +D FN S F FLLS RAGG+G+NL +AD
Sbjct: 821 DILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD 880
Query: 332 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
TV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++ A+ K+
Sbjct: 881 TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 933
Score = 186 (70.5 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 64/198 (32%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S+HRLL+T
Sbjct: 588 KFNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 645
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F EDF + K E NG S ++
Sbjct: 646 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS-----LHKVLEPFLLR 699
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L G+ G++ G
Sbjct: 700 RV----KKDVEKSLPAKVEQILRVEMSALQK----QYYKWILTRNYKALAKGTRGSTSG- 750
Query: 200 SVHNSVMELRNICNHPYL 217
N VMEL+ CNH YL
Sbjct: 751 -FLNIVMELKKCCNHCYL 767
Score = 52 (23.4 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 508 GVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSP----KLKEEG 563
G+++KG G + + R R ++ + EE ++ SD+P ++K++G
Sbjct: 1324 GLEKKGAVTGGEEAKLKKRKPRVKKENKVP-RLKEEHGIELSSPRHSDNPSEEGEVKDDG 1382
Query: 564 LEKS 567
LEKS
Sbjct: 1383 LEKS 1386
Score = 47 (21.6 bits), Expect = 4.5e-53, Sum P(3) = 4.5e-53
Identities = 19/87 (21%), Positives = 40/87 (45%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
+++ S + + + + +V F+ ++E + D + V E E+ +EL
Sbjct: 1006 ENEVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELE 1065
Query: 1890 ----LPSLSSATKEEKIDGSLDKDPDS 1912
LP + S+TK+ + + S D D +S
Sbjct: 1066 EIYMLPRIRSSTKKAQTNDS-DSDTES 1091
Score = 45 (20.9 bits), Expect = 4.5e-53, Sum P(3) = 4.5e-53
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 1997 PEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKES 2033
P H D P+ E K +G EK P +++ KE+
Sbjct: 1366 PRHSDNPSEEG--EVKDDGLEKSPMKKKQKKKENKEN 1400
Score = 41 (19.5 bits), Expect = 1.7e-53, Sum P(2) = 1.7e-53
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 1843 DEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKI 1902
+E ++ SPR +E E D G+ SP+ +++K + S+ K+++
Sbjct: 1357 EEHGIELSSPRHSDNPSEE--GEVKDD-GLEKSPMKKKQKKKENKENKEKQMSSRKDKEG 1413
Query: 1903 DGSLDKDPD 1911
D K D
Sbjct: 1414 DKERKKSKD 1422
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 642 (231.1 bits), Expect = 1.4e-54, Sum P(3) = 1.4e-54
Identities = 155/408 (37%), Positives = 226/408 (55%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++ +K V KF+VLLT+YE + D+ L I+W +++DE HR+KN K L
Sbjct: 806 VFRMKKEVQIKFHVLLTSYELITI--DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 863
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
Y+ ++LLLTGTP FN+ E F + F D S +
Sbjct: 864 YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ-- 914
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVE 187
I +LH +L P +LRRLK V +P K E +VR E S Y K ++ R
Sbjct: 915 --------IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 966
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEM 246
E L S G S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +
Sbjct: 967 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGSSLVKSSGKLML 1026
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN
Sbjct: 1027 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1086
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
+ F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF
Sbjct: 1087 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1146
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
T +VEE++ A+ K+ + + + G + S ++ L+ +L+
Sbjct: 1147 VTRASVEERITQVAKRKMMLTHLVVRPGL--GSKSGSMTKQELDDILK 1192
Score = 45 (20.9 bits), Expect = 3.3e-54, Sum P(4) = 3.3e-54
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 747 NEQPQSESLNPSGGESTATDGNVSSIPTAPVPDS 780
N + + L P G E +SS P PVP S
Sbjct: 1519 NGKYSTPDLVPEGPEGKKPGEVISSDPNTPVPAS 1552
Score = 45 (20.9 bits), Expect = 3.3e-54, Sum P(4) = 3.3e-54
Identities = 28/126 (22%), Positives = 49/126 (38%)
Query: 445 ESVDKQRREEEMATWRKLIRGLGTDGE-PLPPLPSRLVTDDDLKALYEAMK---IYDAPK 500
E D + R E + R+ R L +D + PLPPL +R+ + ++ + + +
Sbjct: 1377 EDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMR 1436
Query: 501 TGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLK 560
G+ P H D RGK +E R+Y + E + + +
Sbjct: 1437 WGMPPQDAFN---SHWLVRDL----RGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVP 1489
Query: 561 EEGLEK 566
EGL +
Sbjct: 1490 REGLSR 1495
Score = 44 (20.5 bits), Expect = 1.4e-54, Sum P(3) = 1.4e-54
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 542 EEEFEKMCQAESSDSPKLKEEGLEKSLP 569
EE E++ +A+ S LKEE L P
Sbjct: 1617 EERMEEVEKAQGSPEQPLKEETLPDKEP 1644
Score = 42 (19.8 bits), Expect = 4.6e-53, Sum P(4) = 4.6e-53
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSE-KDPDSSFAAQEDPKESVVEAGDQM 2041
+S++ +K+ E + +TP+ EG E K P ++ DP V + Q+
Sbjct: 1505 MSLVRKKVQEFEHVNGKYSTPDLVPEGPEGKKPGEVISS--DPNTPVPASPAQL 1556
Score = 42 (19.8 bits), Expect = 7.5e-52, Sum P(6) = 7.5e-52
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 522 QHYGRGKRAREVRSY------EEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
++ G+GKR R+ +Y +++W +E + Q+E S + ++E E+
Sbjct: 1335 RNLGKGKRIRKQVNYNDASQEDQEWQDELSDN--QSEYSIGSEDEDEDFEE 1383
Score = 40 (19.1 bits), Expect = 3.3e-54, Sum P(4) = 3.3e-54
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 2287 SSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPD 2323
S EE++E K GS ++ + D+ PD
Sbjct: 1611 SKDRAREERMEEVEKAQGSPEQPLKEETLPDKEPVPD 1647
Score = 39 (18.8 bits), Expect = 9.5e-52, Sum P(6) = 9.5e-52
Identities = 23/89 (25%), Positives = 39/89 (43%)
Query: 948 PSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGV------IPILALSNMKAVERVNIQS 1001
P ++PAQ+P LG + + L + G + I AL A++RV
Sbjct: 1548 PVPASPAQLPPAPLG-LPDKMEAQLGYTDEKESGTQKPKKSLEIQALPT--ALDRVEA-- 1602
Query: 1002 FEEKACTNASKSKATLPALDSITEPYTGS 1030
E+K ++ SK +A ++ + E GS
Sbjct: 1603 -EDKHQSSDSKDRAREERMEEV-EKAQGS 1629
Score = 38 (18.4 bits), Expect = 1.4e-54, Sum P(3) = 1.4e-54
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 436 RSESEIDVFE-SVDKQRREEEMATWRKLIR 464
R E ++ E V KQ + W KL+R
Sbjct: 1294 REEDGVEEVEREVIKQEENVDPDYWEKLLR 1323
Score = 37 (18.1 bits), Expect = 7.7e-54, Sum P(3) = 7.7e-54
Identities = 8/45 (17%), Positives = 23/45 (51%)
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPM 2388
E +D + + E+++E ++ P G S + ++ ++ +P+
Sbjct: 1362 ELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPL 1406
Score = 37 (18.1 bits), Expect = 4.6e-53, Sum P(4) = 4.6e-53
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 1395 EVFKPENKTDGDSVEKL 1411
EV K E D D EKL
Sbjct: 1305 EVIKQEENVDPDYWEKL 1321
Score = 37 (18.1 bits), Expect = 7.5e-52, Sum P(6) = 7.5e-52
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 704 QPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDI 737
+P+G+ R QS Q+ R K + +L +I
Sbjct: 1384 RPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNI 1417
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 409 (149.0 bits), Expect = 2.0e-54, Sum P(3) = 2.0e-54
Identities = 83/164 (50%), Positives = 113/164 (68%)
Query: 234 LPPIVRLC---GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDG 290
+P ++R GKL LD+LL +LKA DHRVL + MTR++D+ME+YLTF+QY+YLRLDG
Sbjct: 1418 IPSMLRFIADSGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDG 1477
Query: 291 HTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQA 350
+ R ++ ++ Q F+FLLS RAGG+G+NL AADTVI +D+DWNP +D QA
Sbjct: 1478 SSKISQRRDMVTEW-QTRPELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMD 1536
Query: 351 RAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAG 394
RAHRIGQ++ V V RF T T+EE++ A+ K V I+ G
Sbjct: 1537 RAHRIGQQKQVTVYRFITRGTIEERIVIRAKEKEEVQKVVISGG 1580
Score = 277 (102.6 bits), Expect = 2.0e-54, Sum P(3) = 2.0e-54
Identities = 65/204 (31%), Positives = 108/204 (52%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V++T+Y+ ++ D ++W Y+I+DE IK++S L ++ +RLLLTG
Sbjct: 949 FHVVVTSYQLVVL--DAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTG 1006
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F+S +FS+WF+K ES+ ++ + R
Sbjct: 1007 TPIQNTMQELWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQ-------LKR 1059
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLG-------SI-- 193
LH +L+PF+LRR+K V++EL EKIE+ V C+ + QK+L + + + +I
Sbjct: 1060 LHMILKPFMLRRVKKNVQSELGEKIEKEVYCDLTQRQKILYQALRRQISIAELLEKAILG 1119
Query: 194 GNSKGRSVHNSVMELRNICNHPYL 217
G+ S+ N VM+ R +CNHP L
Sbjct: 1120 GDDTVASIMNLVMQFRKVCNHPDL 1143
Score = 39 (18.8 bits), Expect = 2.0e-54, Sum P(3) = 2.0e-54
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 2198 GPEVEPCVQMDVRGD 2212
G E P QMD++G+
Sbjct: 1579 GGETRPTKQMDLKGN 1593
Score = 37 (18.1 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 306 QQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQ-ARAHRIGQKR 359
++DSPF+ + ++L D+V++ P +D+ +R + Q R
Sbjct: 1311 KEDSPFYHLTHVLEESDSQLDLTLLDSVLVQRAS-APPIDIYCPGSRQFTVLQSR 1364
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 615 (221.5 bits), Expect = 2.0e-54, Sum P(2) = 2.0e-54
Identities = 150/353 (42%), Positives = 200/353 (56%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S HRLL+TGTP
Sbjct: 602 DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLH 661
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F EDF + K E NG S LH+VL PF+LRR+K
Sbjct: 662 FIMPEKFEFWEDFEEDHGKGRE-NGYQS-----------------LHKVLEPFLLRRVKK 703
Query: 158 KVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNSKGRSVHNSVMELRNI 211
VE LP K+E+++R E SA Y K ++ R + L G+ G++ G N VMEL+
Sbjct: 704 DVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG--FLNIVMELKKC 761
Query: 212 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 271
CNH YL + EE + + L ++R GKL +LD+LL +L+ +RVL FS M R+L
Sbjct: 762 CNHCYLIK-PPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRML 820
Query: 272 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 331
D++ +YLT K Y + RLDG G R +D FN S F FLLS RAGG+G+NL +AD
Sbjct: 821 DILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD 880
Query: 332 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
TV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++ A+ K+
Sbjct: 881 TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 933
Score = 184 (69.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 64/198 (32%), Positives = 90/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S HRLL+T
Sbjct: 588 KFNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLIT 645
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F EDF + K E NG S ++
Sbjct: 646 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS-----LHKVLEPFLLR 699
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L G+ G++ G
Sbjct: 700 RV----KKDVEKSLPAKVEQILRVEMSALQK----QYYKWILTRNYKALAKGTRGSTSG- 750
Query: 200 SVHNSVMELRNICNHPYL 217
N VMEL+ CNH YL
Sbjct: 751 -FLNIVMELKKCCNHCYL 767
Score = 47 (21.6 bits), Expect = 2.0e-54, Sum P(2) = 2.0e-54
Identities = 19/87 (21%), Positives = 40/87 (45%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
+++ S + + + + +V F+ ++E + D + V E E+ +EL
Sbjct: 1006 ENEVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELE 1065
Query: 1890 ----LPSLSSATKEEKIDGSLDKDPDS 1912
LP + S+TK+ + + S D D +S
Sbjct: 1066 EIYMLPRIRSSTKKAQTNDS-DSDTES 1091
Score = 42 (19.8 bits), Expect = 6.6e-54, Sum P(2) = 6.6e-54
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 1759 GPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPG-ADNP--EGGV 1801
G A L K + + K + DEHG P +DNP EG V
Sbjct: 1333 GGEEAKLKKRKPRVKKENKEPRLKDEHGVEFSSPRHSDNPSEEGEV 1378
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 638 (229.6 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 149/351 (42%), Positives = 202/351 (57%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 607 DKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSLLH 666
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F S EDF K NG S LH+VL PF+LRR+K
Sbjct: 667 FLMSDKFESWEDFEDEHGKG-RDNGYQS-----------------LHKVLEPFLLRRVKK 708
Query: 158 KVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRSVH--NSVMELRNICN 213
VE LP K+E+++R + SA QK K + N ++ ++G S N VMEL+ CN
Sbjct: 709 DVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNFKALSKGTRGSSSGFLNIVMELKKCCN 768
Query: 214 HPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDV 273
H +L + E+ + P+ +L +VR GKL +LD+LL +LK +RVL FS M R+LD+
Sbjct: 769 HAFLIK-QPEDGENDAPQEHLQSLVRGGGKLVLLDKLLTRLKDRGNRVLIFSQMVRMLDI 827
Query: 274 MEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTV 333
+ DYL+ K+Y++ RLDG G R +D FN + S F FLLS RAGG+G+NL +ADTV
Sbjct: 828 LADYLSMKRYQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTV 887
Query: 334 IIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE + A+ K+
Sbjct: 888 VIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKM 938
Score = 189 (71.6 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 62/197 (31%), Positives = 91/197 (46%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN LLTTYE L+ D+ L I W ++ +DE HR+KN L L ++S+HRLL+T
Sbjct: 593 KFNALLTTYEILLK--DKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLIT 650
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F S EDF K NG S ++
Sbjct: 651 GTPLQNSLKELWSLLHFLMSDKFESWEDFEDEHGKG-RDNGYQS-----LHKVLEPFLLR 704
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEE-NLGSIGNSKGRS 200
R+ + V + L KVE L +++ + + Y+ +L + + + G+ G+S G
Sbjct: 705 RV----KKDVEKSLPAKVEQIL--RVDMSAQ-QKQFYKWILTRNFKALSKGTRGSSSG-- 755
Query: 201 VHNSVMELRNICNHPYL 217
N VMEL+ CNH +L
Sbjct: 756 FLNIVMELKKCCNHAFL 772
Score = 43 (20.2 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 11/53 (20%), Positives = 26/53 (49%)
Query: 520 DTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEG--LEKSLPT 570
D + +GK+ + Y + +++ E ++ D PK+K+ ++K P+
Sbjct: 1303 DPEKKPQGKQLQMRTDYLLKMLKKDLESQDAIKAGDEPKIKKRKPRMKKKAPS 1355
Score = 42 (19.8 bits), Expect = 1.4e-53, Sum P(4) = 1.4e-53
Identities = 13/67 (19%), Positives = 24/67 (35%)
Query: 1189 KKQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEA 1248
+K+ DK S + P G + P +T + + + T + E
Sbjct: 1408 EKEGDKDKKRSKPKKEKAKPAGKGKKAQGPVHITQGSEPIPIGEEDDELDQETFSICKER 1467
Query: 1249 LKPENKA 1255
++P KA
Sbjct: 1468 MRPVKKA 1474
Score = 42 (19.8 bits), Expect = 1.8e-53, Sum P(4) = 1.8e-53
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 482 TDDDLKALYEAMKIYDAPKTGVSPNVGVKRK 512
TD LK L + ++ DA K G P + KRK
Sbjct: 1317 TDYLLKMLKKDLESQDAIKAGDEPKIK-KRK 1346
Score = 41 (19.5 bits), Expect = 7.0e-54, Sum P(3) = 7.0e-54
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 1510 VEPTSASPERSGPQNSAVGF 1529
+EP S +RS Q SA F
Sbjct: 1787 LEPISPGMDRSAEQKSATDF 1806
Score = 40 (19.1 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 736 DIPSPGPDPKTNEQPQS--ESLNP----SGGESTATDGN 768
D P P DP++ + +S E ++P S + +ATD N
Sbjct: 1769 DKPPPLIDPRSPQSQKSPLEPISPGMDRSAEQKSATDFN 1807
Score = 40 (19.1 bits), Expect = 2.3e-53, Sum P(4) = 2.3e-53
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 913 ADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGS 951
A AG +K A+ V + Q ++PI + D Q + S
Sbjct: 1425 AKPAGKGKK-AQGPVHITQGSEPIPIGEEDDELDQETFS 1462
Score = 39 (18.8 bits), Expect = 2.3e-53, Sum P(4) = 2.3e-53
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 1267 SPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNN 1302
SP + P LE PG D E+ + N NN
Sbjct: 1779 SPQSQKSP----LEPISPGMDRSAEQKSATDFNWNN 1810
Score = 39 (18.8 bits), Expect = 2.3e-53, Sum P(4) = 2.3e-53
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 1967 VSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDI 2002
+S Q L+ ++ + + GD++ + PEH+ I
Sbjct: 1485 LSVQDQLQHTRTCLLKIGDRITECLKSYSDPEHIKI 1520
Score = 37 (18.1 bits), Expect = 7.0e-54, Sum P(3) = 7.0e-54
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 1368 EQSGTEIDAKVKWKNTPLPGEAIVAGI---EV--FKPENKTDGDSVEKLEDTVDDHSLVK 1422
E +E D + K + P + V G E+ F K G +E+LE D LV+
Sbjct: 1108 ETDDSEDDKRPKRRGRPRARKNNVEGFTDAEIRRFIKAYKKFGAPLERLEAIARDSELVE 1167
Query: 1423 ELI 1425
+ I
Sbjct: 1168 KSI 1170
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 399 (145.5 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 86/168 (51%), Positives = 108/168 (64%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL LD LL +LKA HRVL + MTR++D+ME+YLT++ Y+Y RLDG T DR +
Sbjct: 1321 GKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTV 1380
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
F QQ F+FLLS RAGG+G+NL AADTVI +D+DWNP +D QA RAHR+GQ R V
Sbjct: 1381 ADF-QQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQV 1439
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSIT---AGFFDNNTSAEDRR 406
V R T T+EE++R A K V I+ AG D NT D +
Sbjct: 1440 TVYRLITRSTIEERIRKRALQKEEVQRVVISGGAAGGVDFNTRNRDSK 1487
Score = 266 (98.7 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 67/233 (28%), Positives = 117/233 (50%)
Query: 13 YSREKIVHQK---FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL 69
+ R+ I + K F+VL+T+Y+ ++ D K++W Y+I+DE IK++ L
Sbjct: 892 WDRKHITYTKESEFHVLVTSYQLVVL--DAQYFQKVKWQYMILDEAQAIKSSQSSRWKSL 949
Query: 70 KHYQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXX 129
+ +RLLLTGTP +F+S ++FS+WF+K ES+ ++
Sbjct: 950 LGFHCRNRLLLTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLN 1009
Query: 130 XXXXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN 189
+ RLH +L+PF+LRR+K V+ EL +K+E+ V C+ + Q+ L +
Sbjct: 1010 EDQ-------LRRLHMILKPFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRALYTNLRNR 1062
Query: 190 LG--------SIGN-SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHY 233
+ ++G+ + ++ N VM+ R +CNHP L + AE H+
Sbjct: 1063 VSIMDLIEKAAVGDETDSTTLMNLVMQFRKVCNHPDLFE-RAETKSPFSLAHF 1114
Score = 60 (26.2 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 678 SSQPTTAFVPVAPGSQSASACPSTPMQPKGRGR 710
S++P+ A PV+ + STP+ +GRGR
Sbjct: 1552 SAKPSGAATPVSTAENIGTPSASTPVPKRGRGR 1584
Score = 50 (22.7 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 19/79 (24%), Positives = 32/79 (40%)
Query: 904 VQPC-GVATSADVAGPDQKPAEQSVRVVQSNQPI-NLPATHDSSSQPSGSTPAQVPSMDL 961
++PC G A SA P + ++++ + N+P H PS + Q+ L
Sbjct: 1228 IEPCAGPAASAP---PITLVSSGQEALIETQDALFNVPVQHALFGTPSKAMEEQIIEQQL 1284
Query: 962 GNVASDTKEVLSENSSSKG 980
+L E S+KG
Sbjct: 1285 DPTPYSLPPMLPEPISTKG 1303
Score = 46 (21.3 bits), Expect = 6.2e-53, Sum P(3) = 6.2e-53
Identities = 14/70 (20%), Positives = 26/70 (37%)
Query: 2028 EDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANEEEMIEGFDNDPTGISMAVM 2087
E + +E G+ G S GG +K D+ + E + P+G + V
Sbjct: 1505 EQKEREALERGETFGASKGGKKNAQKRKRDVTLDDMYHEGEGNFDDA-SAKPSGAATPVS 1563
Query: 2088 DSKECAAEAA 2097
++ +A
Sbjct: 1564 TAENIGTPSA 1573
Score = 40 (19.1 bits), Expect = 2.6e-52, Sum P(3) = 2.6e-52
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 943 DSSSQPSGS-TPAQVPSMDLGNVASDTKEVLSENSSSKGG 981
D+S++PSG+ TP ++G ++ T + + +GG
Sbjct: 1550 DASAKPSGAATPVSTAE-NIGTPSASTP--VPKRGRGRGG 1586
Score = 39 (18.8 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 852 ALGSPPISDVSAGPES 867
A +PPI+ VS+G E+
Sbjct: 1235 AASAPPITLVSSGQEA 1250
Score = 38 (18.4 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 2399 NTSEGMGGPS---PPLVIAEDKTENEIEEDPVVNSVAVEES 2436
N E GP+ PP+ + E IE + +V V+ +
Sbjct: 1226 NVIEPCAGPAASAPPITLVSSGQEALIETQDALFNVPVQHA 1266
Score = 37 (18.1 bits), Expect = 5.4e-52, Sum P(3) = 5.4e-52
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1072 SVPVKRHGRKTPTTGEAPRRRGKKQ 1096
S PV + GR G A R + K+
Sbjct: 1574 STPVPKRGRGRGGKGTAKRAKTTKE 1598
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 615 (221.5 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 150/353 (42%), Positives = 200/353 (56%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S HRLL+TGTP
Sbjct: 571 DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLH 630
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F EDF + K E NG S LH+VL PF+LRR+K
Sbjct: 631 FIMPEKFEFWEDFEEDHGKGRE-NGYQS-----------------LHKVLEPFLLRRVKK 672
Query: 158 KVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNSKGRSVHNSVMELRNI 211
VE LP K+E+++R E SA Y K ++ R + L G+ G++ G N VMEL+
Sbjct: 673 DVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG--FLNIVMELKKC 730
Query: 212 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 271
CNH YL + EE + + L ++R GKL +LD+LL +L+ +RVL FS M R+L
Sbjct: 731 CNHCYLIK-PPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRML 789
Query: 272 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 331
D++ +YLT K Y + RLDG G R +D FN S F FLLS RAGG+G+NL +AD
Sbjct: 790 DILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD 849
Query: 332 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
TV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++ A+ K+
Sbjct: 850 TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 902
Score = 184 (69.8 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 64/198 (32%), Positives = 90/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S HRLL+T
Sbjct: 557 KFNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLIT 614
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F EDF + K E NG S ++
Sbjct: 615 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS-----LHKVLEPFLLR 668
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L G+ G++ G
Sbjct: 669 RV----KKDVEKSLPAKVEQILRVEMSALQK----QYYKWILTRNYKALAKGTRGSTSG- 719
Query: 200 SVHNSVMELRNICNHPYL 217
N VMEL+ CNH YL
Sbjct: 720 -FLNIVMELKKCCNHCYL 736
Score = 51 (23.0 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFST----MTRLLDVMEDYLTFKQYRYLRLDGHTSGGDR 297
G E++ + P+LK TD ++L T + L DYL + L G +GG+
Sbjct: 1248 GNWELI-KTDPELKLTDKKILPVETDKKPQGKQLQTRADYLLKLLRKSLEKKGAVTGGEE 1306
Query: 298 GAL 300
L
Sbjct: 1307 AKL 1309
Score = 50 (22.7 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 46/190 (24%), Positives = 73/190 (38%)
Query: 1759 GPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPG-ADNP-EGGVIVPEHKSENMGEKDD 1816
G A L K + + K + DEHG P +DNP E G + + ++ +K
Sbjct: 1303 GGEEAKLKKRKPRVKKENKEPRLKDEHGVEFSSPRHSDNPSEEGEVKDDGLEKSPMKKKQ 1362
Query: 1817 ISSEHAFGSSLVL---QDKASEAEIGDRID--EPQVDGFSPRSMSGVVDELVDEAGDHMG 1871
E+ + +DK + E D E + G +S S + H+
Sbjct: 1363 KKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKKPKGGDAKSSS---KSKRSQGPVHIT 1419
Query: 1872 VSHSPVHVVEREKSEELGLPSLSSATKE----EKIDGSLDKDPDSNLVV---LEDSKG-- 1922
PV + E E ++L + S + +K LDK PD L V LE ++
Sbjct: 1420 AGSEPVPIGEDE-DDDLDQETFSICKERMRPVKKALKQLDK-PDKGLNVQEQLEHTRNCL 1477
Query: 1923 -SIGDQMDCC 1931
IGD++ C
Sbjct: 1478 LKIGDRIAEC 1487
Score = 49 (22.3 bits), Expect = 1.2e-52, Sum P(3) = 1.2e-52
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 509 VKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSP----KLKEEGL 564
+++KG G + + R R ++ + E + +E + SD+P ++K++GL
Sbjct: 1295 LEKKGAVTGGEEAKLKKRKPRVKK-ENKEPRLKDEHGVEFSSPRHSDNPSEEGEVKDDGL 1353
Query: 565 EKS 567
EKS
Sbjct: 1354 EKS 1356
Score = 47 (21.6 bits), Expect = 1.2e-51, Sum P(4) = 1.2e-51
Identities = 19/87 (21%), Positives = 40/87 (45%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
+++ S + + + + +V F+ ++E + D + V E E+ +EL
Sbjct: 975 ENEVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELE 1034
Query: 1890 ----LPSLSSATKEEKIDGSLDKDPDS 1912
LP + S+TK+ + + S D D +S
Sbjct: 1035 EIYMLPRIRSSTKKAQTNDS-DSDTES 1060
Score = 45 (20.9 bits), Expect = 1.2e-51, Sum P(4) = 1.2e-51
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 1997 PEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKES 2033
P H D P+ E K +G EK P +++ KE+
Sbjct: 1336 PRHSDNPSEEG--EVKDDGLEKSPMKKKQKKKENKEN 1370
Score = 39 (18.8 bits), Expect = 1.2e-52, Sum P(3) = 1.2e-52
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1220 ELTGTKNDASVRGDHTPVSGH 1240
E +G+ D+ + HTP + H
Sbjct: 1555 EASGSSRDSLISQSHTPHNLH 1575
Score = 37 (18.1 bits), Expect = 1.2e-51, Sum P(4) = 1.2e-51
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 2174 QEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVP 2216
+E +K++ EK+P G SK + V + G VP
Sbjct: 1385 KERKKSKDKKEKKPKGGDAKSSSKSKRSQGPVHITA-GSEPVP 1426
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 615 (221.5 bits), Expect = 2.5e-54, Sum P(2) = 2.5e-54
Identities = 150/353 (42%), Positives = 200/353 (56%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S HRLL+TGTP
Sbjct: 605 DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLH 664
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F EDF + K E NG S LH+VL PF+LRR+K
Sbjct: 665 FIMPEKFEFWEDFEEDHGKGRE-NGYQS-----------------LHKVLEPFLLRRVKK 706
Query: 158 KVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNSKGRSVHNSVMELRNI 211
VE LP K+E+++R E SA Y K ++ R + L G+ G++ G N VMEL+
Sbjct: 707 DVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG--FLNIVMELKKC 764
Query: 212 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 271
CNH YL + EE + + L ++R GKL +LD+LL +L+ +RVL FS M R+L
Sbjct: 765 CNHCYLIK-PPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRML 823
Query: 272 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 331
D++ +YLT K Y + RLDG G R +D FN S F FLLS RAGG+G+NL +AD
Sbjct: 824 DILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD 883
Query: 332 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
TV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++ A+ K+
Sbjct: 884 TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 936
Score = 184 (69.8 bits), Expect = 6.4e-08, Sum P(4) = 6.4e-08
Identities = 64/198 (32%), Positives = 90/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S HRLL+T
Sbjct: 591 KFNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLIT 648
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F EDF + K E NG S ++
Sbjct: 649 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS-----LHKVLEPFLLR 702
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L G+ G++ G
Sbjct: 703 RV----KKDVEKSLPAKVEQILRVEMSALQK----QYYKWILTRNYKALAKGTRGSTSG- 753
Query: 200 SVHNSVMELRNICNHPYL 217
N VMEL+ CNH YL
Sbjct: 754 -FLNIVMELKKCCNHCYL 770
Score = 51 (23.0 bits), Expect = 2.5e-54, Sum P(2) = 2.5e-54
Identities = 46/191 (24%), Positives = 76/191 (39%)
Query: 1759 GPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPG-ADNP-EGGVIVPEHKSENMGEKDD 1816
G A L K + + K + DEHG P +DNP E G + + ++ +K
Sbjct: 1337 GGEEAKLKKRKPRVKKENKEPRLKDEHGVEFSSPRHSDNPSEEGEVKDDGLEKSPMKKKQ 1396
Query: 1817 ISSEHAFGSSLVL---QDKASEAE---IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHM 1870
E+ + +DK + E D+ ++P+ G +S S + H+
Sbjct: 1397 KKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKPK--GGDAKSSS---KSKRSQGPVHI 1451
Query: 1871 GVSHSPVHVVEREKSEELGLPSLSSATKE----EKIDGSLDKDPDSNLVV---LEDSKG- 1922
PV + E E ++L + S + +K LDK PD L V LE ++
Sbjct: 1452 TAGSEPVPIGEDE-DDDLDQETFSICKERMRPVKKALKQLDK-PDKGLNVQEQLEHTRNC 1509
Query: 1923 --SIGDQMDCC 1931
IGD++ C
Sbjct: 1510 LLKIGDRIAEC 1520
Score = 51 (23.0 bits), Expect = 1.1e-53, Sum P(3) = 1.1e-53
Identities = 23/104 (22%), Positives = 44/104 (42%)
Query: 2293 EEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGG------GVVSIPVPEEA 2346
+EK K +KE S ++ KG DA+ SS++ G G +P+ E+
Sbjct: 1405 KEKQMSSRKDKEGDKERKKSKDKKEKPKGGDAKSSSKSKRSQGPVHITAGSEPVPIGEDE 1464
Query: 2347 DGPASFLAAEEEKNECSDK-EPVGSSVSQIESKEPEAKAFEPMD 2389
D +E + C ++ PV ++ Q++ + E ++
Sbjct: 1465 DDDLD----QETFSICKERMRPVKKALKQLDKPDKGLNVQEQLE 1504
Score = 51 (23.0 bits), Expect = 6.4e-08, Sum P(4) = 6.4e-08
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFST----MTRLLDVMEDYLTFKQYRYLRLDGHTSGGDR 297
G E++ + P+LK TD ++L T + L DYL + L G +GG+
Sbjct: 1282 GNWELI-KTDPELKLTDKKILPVETDKKPQGKQLQTRADYLLKLLRKSLEKKGAVTGGEE 1340
Query: 298 GAL 300
L
Sbjct: 1341 AKL 1343
Score = 49 (22.3 bits), Expect = 1.1e-53, Sum P(3) = 1.1e-53
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 509 VKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSP----KLKEEGL 564
+++KG G + + R R ++ + E + +E + SD+P ++K++GL
Sbjct: 1329 LEKKGAVTGGEEAKLKKRKPRVKK-ENKEPRLKDEHGVEFSSPRHSDNPSEEGEVKDDGL 1387
Query: 565 EKS 567
EKS
Sbjct: 1388 EKS 1390
Score = 48 (22.0 bits), Expect = 5.1e-54, Sum P(2) = 5.1e-54
Identities = 24/91 (26%), Positives = 37/91 (40%)
Query: 1843 DEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKI 1902
DE V+ SPR +E E D G+ SP+ +++K + S+ K+++
Sbjct: 1361 DEHGVEFSSPRHSDNPSEE--GEVKDD-GLEKSPMKKKQKKKENKENKEKQMSSRKDKEG 1417
Query: 1903 DGSLDKDPDSNLVVLEDSKGSIGDQMDCCQS 1933
D K D E KG GD +S
Sbjct: 1418 DKERKKSKDKK----EKPKG--GDAKSSSKS 1442
Score = 47 (21.6 bits), Expect = 7.9e-53, Sum P(4) = 7.9e-53
Identities = 19/87 (21%), Positives = 40/87 (45%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
+++ S + + + + +V F+ ++E + D + V E E+ +EL
Sbjct: 1009 ENEVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELE 1068
Query: 1890 ----LPSLSSATKEEKIDGSLDKDPDS 1912
LP + S+TK+ + + S D D +S
Sbjct: 1069 EIYMLPRIRSSTKKAQTNDS-DSDTES 1094
Score = 46 (21.3 bits), Expect = 8.3e-54, Sum P(2) = 8.3e-54
Identities = 31/148 (20%), Positives = 52/148 (35%)
Query: 1211 FNSP--NENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSP 1268
F+SP ++NP E K+D + +P+ K + K ENK + +
Sbjct: 1367 FSSPRHSDNPSEEGEVKDDGL---EKSPM-------KKKQKKKENKENKEKQMSSRKDKE 1416
Query: 1269 DDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAP--ASTEAFEQE 1326
DK + + P G D +++S+ + E P+ + E F
Sbjct: 1417 GDKERKKSKDKKEKPKGGDAKSSSKSKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSIC 1476
Query: 1327 KVTNTSSFVNLADLSSDDKTCSVTPAME 1354
K L L DK +V +E
Sbjct: 1477 KERMRPVKKALKQLDKPDKGLNVQEQLE 1504
Score = 45 (20.9 bits), Expect = 7.9e-53, Sum P(4) = 7.9e-53
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 1997 PEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKES 2033
P H D P+ E K +G EK P +++ KE+
Sbjct: 1370 PRHSDNPSEEG--EVKDDGLEKSPMKKKQKKKENKEN 1404
Score = 39 (18.8 bits), Expect = 2.0e-52, Sum P(3) = 2.0e-52
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1220 ELTGTKNDASVRGDHTPVSGH 1240
E +G+ D+ + HTP + H
Sbjct: 1586 EASGSSRDSLISQSHTPHNLH 1606
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 615 (221.5 bits), Expect = 2.5e-54, Sum P(2) = 2.5e-54
Identities = 150/353 (42%), Positives = 200/353 (56%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S HRLL+TGTP
Sbjct: 615 DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLH 674
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F EDF + K E NG S LH+VL PF+LRR+K
Sbjct: 675 FIMPEKFEFWEDFEEDHGKGRE-NGYQS-----------------LHKVLEPFLLRRVKK 716
Query: 158 KVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNSKGRSVHNSVMELRNI 211
VE LP K+E+++R E SA Y K ++ R + L G+ G++ G N VMEL+
Sbjct: 717 DVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG--FLNIVMELKKC 774
Query: 212 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 271
CNH YL + EE + + L ++R GKL +LD+LL +L+ +RVL FS M R+L
Sbjct: 775 CNHCYLIK-PPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRML 833
Query: 272 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 331
D++ +YLT K Y + RLDG G R +D FN S F FLLS RAGG+G+NL +AD
Sbjct: 834 DILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD 893
Query: 332 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
TV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++ A+ K+
Sbjct: 894 TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 946
Score = 184 (69.8 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 64/198 (32%), Positives = 90/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S HRLL+T
Sbjct: 601 KFNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLIT 658
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F EDF + K E NG S ++
Sbjct: 659 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS-----LHKVLEPFLLR 712
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L G+ G++ G
Sbjct: 713 RV----KKDVEKSLPAKVEQILRVEMSALQK----QYYKWILTRNYKALAKGTRGSTSG- 763
Query: 200 SVHNSVMELRNICNHPYL 217
N VMEL+ CNH YL
Sbjct: 764 -FLNIVMELKKCCNHCYL 780
Score = 51 (23.0 bits), Expect = 2.5e-54, Sum P(2) = 2.5e-54
Identities = 46/191 (24%), Positives = 76/191 (39%)
Query: 1759 GPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPG-ADNP-EGGVIVPEHKSENMGEKDD 1816
G A L K + + K + DEHG P +DNP E G + + ++ +K
Sbjct: 1346 GGEEAKLKKRKPRVKKENKEPRLKDEHGVEFSSPRHSDNPSEEGEVKDDGLEKSPMKKKQ 1405
Query: 1817 ISSEHAFGSSLVL---QDKASEAE---IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHM 1870
E+ + +DK + E D+ ++P+ G +S S + H+
Sbjct: 1406 KKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKPK--GGDAKSSS---KSKRSQGPVHI 1460
Query: 1871 GVSHSPVHVVEREKSEELGLPSLSSATKE----EKIDGSLDKDPDSNLVV---LEDSKG- 1922
PV + E E ++L + S + +K LDK PD L V LE ++
Sbjct: 1461 TAGSEPVPIGEDE-DDDLDQETFSICKERMRPVKKALKQLDK-PDKGLNVQEQLEHTRNC 1518
Query: 1923 --SIGDQMDCC 1931
IGD++ C
Sbjct: 1519 LLKIGDRIAEC 1529
Score = 51 (23.0 bits), Expect = 1.1e-53, Sum P(3) = 1.1e-53
Identities = 23/104 (22%), Positives = 44/104 (42%)
Query: 2293 EEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGG------GVVSIPVPEEA 2346
+EK K +KE S ++ KG DA+ SS++ G G +P+ E+
Sbjct: 1414 KEKQMSSRKDKEGDKERKKSKDKKEKPKGGDAKSSSKSKRSQGPVHITAGSEPVPIGEDE 1473
Query: 2347 DGPASFLAAEEEKNECSDK-EPVGSSVSQIESKEPEAKAFEPMD 2389
D +E + C ++ PV ++ Q++ + E ++
Sbjct: 1474 DDDLD----QETFSICKERMRPVKKALKQLDKPDKGLNVQEQLE 1513
Score = 49 (22.3 bits), Expect = 1.1e-53, Sum P(3) = 1.1e-53
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 509 VKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSP----KLKEEGL 564
+++KG G + + R R ++ + E + +E + SD+P ++K++GL
Sbjct: 1338 LEKKGAVTGGEEAKLKKRKPRVKK-ENKEPRLKDEHGVEFSSPRHSDNPSEEGEVKDDGL 1396
Query: 565 EKS 567
EKS
Sbjct: 1397 EKS 1399
Score = 48 (22.0 bits), Expect = 5.2e-54, Sum P(2) = 5.2e-54
Identities = 24/91 (26%), Positives = 37/91 (40%)
Query: 1843 DEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKI 1902
DE V+ SPR +E E D G+ SP+ +++K + S+ K+++
Sbjct: 1370 DEHGVEFSSPRHSDNPSEE--GEVKDD-GLEKSPMKKKQKKKENKENKEKQMSSRKDKEG 1426
Query: 1903 DGSLDKDPDSNLVVLEDSKGSIGDQMDCCQS 1933
D K D E KG GD +S
Sbjct: 1427 DKERKKSKDKK----EKPKG--GDAKSSSKS 1451
Score = 47 (21.6 bits), Expect = 8.2e-53, Sum P(4) = 8.2e-53
Identities = 19/87 (21%), Positives = 40/87 (45%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
+++ S + + + + +V F+ ++E + D + V E E+ +EL
Sbjct: 1019 ENEVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELE 1078
Query: 1890 ----LPSLSSATKEEKIDGSLDKDPDS 1912
LP + S+TK+ + + S D D +S
Sbjct: 1079 EIYMLPRIRSSTKKAQTNDS-DSDTES 1104
Score = 46 (21.3 bits), Expect = 8.5e-54, Sum P(2) = 8.5e-54
Identities = 31/148 (20%), Positives = 52/148 (35%)
Query: 1211 FNSP--NENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSP 1268
F+SP ++NP E K+D + +P+ K + K ENK + +
Sbjct: 1376 FSSPRHSDNPSEEGEVKDDGL---EKSPM-------KKKQKKKENKENKEKQMSSRKDKE 1425
Query: 1269 DDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAP--ASTEAFEQE 1326
DK + + P G D +++S+ + E P+ + E F
Sbjct: 1426 GDKERKKSKDKKEKPKGGDAKSSSKSKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSIC 1485
Query: 1327 KVTNTSSFVNLADLSSDDKTCSVTPAME 1354
K L L DK +V +E
Sbjct: 1486 KERMRPVKKALKQLDKPDKGLNVQEQLE 1513
Score = 45 (20.9 bits), Expect = 8.2e-53, Sum P(4) = 8.2e-53
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 1997 PEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKES 2033
P H D P+ E K +G EK P +++ KE+
Sbjct: 1379 PRHSDNPSEEG--EVKDDGLEKSPMKKKQKKKENKEN 1413
Score = 39 (18.8 bits), Expect = 2.0e-52, Sum P(3) = 2.0e-52
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1220 ELTGTKNDASVRGDHTPVSGH 1240
E +G+ D+ + HTP + H
Sbjct: 1595 EASGSSRDSLISQSHTPHNLH 1615
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 594 (214.2 bits), Expect = 3.5e-54, Sum P(2) = 3.5e-54
Identities = 144/363 (39%), Positives = 203/363 (55%)
Query: 26 LLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPX 85
+L T ++ K D+ L + W +I +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 587 ILLTTYEILLK-DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 645
Query: 86 XXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQ 145
F E FS W + FE + LH+
Sbjct: 646 QNSLKELWSLLH------FIMPEKFSSW--EDFEEEHGKGREYGYAS----------LHK 687
Query: 146 VLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRSVH- 202
L PF+LRR+K VE LP K+E+++R E SA QK K + N ++ SKG +
Sbjct: 688 ELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGF 747
Query: 203 -NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRV 261
N +MEL+ CNH YL + + + + L ++R GKL +LD+LL +L+ +RV
Sbjct: 748 LNIMMELKKCCNHCYLIK-PPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV 806
Query: 262 LFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAG 321
L FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FLLS RAG
Sbjct: 807 LIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG 866
Query: 322 GVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAE 381
G+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE + A+
Sbjct: 867 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAK 926
Query: 382 HKL 384
K+
Sbjct: 927 KKM 929
Score = 187 (70.9 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 63/198 (31%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 584 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 641
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S EDF + K E ++
Sbjct: 642 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------YASLHKELEPFLLR 695
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L GS G++ G
Sbjct: 696 RV----KKDVEKSLPAKVEQILRMEMSALQK----QYYKWILTRNYKALSKGSKGSTSG- 746
Query: 200 SVHNSVMELRNICNHPYL 217
N +MEL+ CNH YL
Sbjct: 747 -FLNIMMELKKCCNHCYL 763
Score = 70 (29.7 bits), Expect = 3.5e-54, Sum P(2) = 3.5e-54
Identities = 67/303 (22%), Positives = 119/303 (39%)
Query: 1824 GSSLVLQDKASEAE-IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHS----PVH 1878
G L+D +S E G R+ + V G + R +SGV + + +SH P+H
Sbjct: 1174 GCIKALKDNSSGTERTGGRLGK--VKGPTFR-ISGV------QVNAKLVISHEEELIPLH 1224
Query: 1879 VVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV--LEDSKGS---IGDQMDCCQS 1933
EE ++ TK D K+ DSNL++ E GS I D +
Sbjct: 1225 KSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLT 1284
Query: 1934 GVVVPENLSDFCQPSS--SLAPWEAKI-DGSSEKDPVSSQSVLEGSKETVAEAGDQMDIS 1990
++P++ Q + A + K+ K S GSK A A + + +
Sbjct: 1285 HKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEAQRLSGAGGSKRRKARA--KKNKA 1342
Query: 1991 IMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATV 2050
+ K+ E + +S E+ E +K +S ++E K+S V + G
Sbjct: 1343 MKSIKVKEEMKSDSSPLPSEKSDEDDDKLNESKSESKERSKKSSVSDAPVHITASGEPVP 1402
Query: 2051 MEKSSEDLATPPLSLANE-----EEMIEGFDNDPTGISMA--VMDSKECAAEAADQM--C 2101
+ + SE+L S+ E + ++ D G+S + +++C + D + C
Sbjct: 1403 ISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITEC 1462
Query: 2102 VSE 2104
+ E
Sbjct: 1463 LKE 1465
Score = 51 (23.0 bits), Expect = 1.9e-50, Sum P(3) = 1.9e-50
Identities = 25/84 (29%), Positives = 32/84 (38%)
Query: 1126 GSKTISLRSKQETADVN-DVARVMKEIFSETCSSKAKTGDSSLNEGKDXXXXXXXXXXXX 1184
GSK R+K+ A + V MK S S K+ D LNE K
Sbjct: 1329 GSKRRKARAKKNKAMKSIKVKEEMKSDSSPLPSEKSDEDDDKLNESKSESK--------- 1379
Query: 1185 XEVAKKQSSDDKTCSVTPTVETPP 1208
E +KK S D +T + E P
Sbjct: 1380 -ERSKKSSVSDAPVHITASGEPVP 1402
Score = 38 (18.4 bits), Expect = 1.9e-50, Sum P(3) = 1.9e-50
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 1426 HRSPDHSDMVIGNVPGNTSED 1446
HRS DH + G++ + D
Sbjct: 1611 HRSRDHRSNLEGSIKDRSHSD 1631
Score = 37 (18.1 bits), Expect = 1.0e-50, Sum P(2) = 1.0e-50
Identities = 21/83 (25%), Positives = 29/83 (34%)
Query: 1458 MKSTEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKTDVGNHPQNV----EPT 1513
MKS P S K+D+ D E S +E S K+ V + P ++ EP
Sbjct: 1352 MKSDSSPLPSEKSDEDDDKLNE----------SKSESKERSKKSSVSDAPVHITASGEPV 1401
Query: 1514 SASPERSGPQNSAVGFCDKSEIP 1536
S E C + P
Sbjct: 1402 PISEESEELDQKTFSICKERMRP 1424
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 612 (220.5 bits), Expect = 5.0e-54, Sum P(2) = 5.0e-54
Identities = 149/353 (42%), Positives = 201/353 (56%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L I W ++ +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 584 DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH 643
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F EDF + K E NG S LH+VL PF+LRR+K
Sbjct: 644 FIMPEKFEFWEDFEEDHGKGRE-NGYQS-----------------LHKVLEPFLLRRVKK 685
Query: 158 KVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNSKGRSVHNSVMELRNI 211
VE LP K+E+++R E SA Y K ++ R + L G+ G++ G N VMEL+
Sbjct: 686 DVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG--FLNIVMELKKC 743
Query: 212 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 271
CNH +L + EE + + L ++R GKL +LD+LL +L+ +RVL FS M R+L
Sbjct: 744 CNHCHLIK-PPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRML 802
Query: 272 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 331
D++ +YLT K Y + RLDG G R +D FN S F FLLS RAGG+G+NL +AD
Sbjct: 803 DILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASAD 862
Query: 332 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
TV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++ A+ K+
Sbjct: 863 TVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 915
Score = 181 (68.8 bits), Expect = 8.1e-09, Sum P(4) = 8.1e-09
Identities = 63/198 (31%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S+HRLL+T
Sbjct: 570 KFNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 627
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F EDF + K E NG S ++
Sbjct: 628 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS-----LHKVLEPFLLR 681
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L G+ G++ G
Sbjct: 682 RV----KKDVEKSLPAKVEQILRVEMSALQK----QYYKWILTRNYKALAKGTRGSTSG- 732
Query: 200 SVHNSVMELRNICNHPYL 217
N VMEL+ CNH +L
Sbjct: 733 -FLNIVMELKKCCNHCHL 749
Score = 54 (24.1 bits), Expect = 6.5e-54, Sum P(3) = 6.5e-54
Identities = 29/110 (26%), Positives = 49/110 (44%)
Query: 2293 EEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASF 2352
+EK K +KE S ++ KG DA+ SS++ G V I E P
Sbjct: 1383 KEKQMSSRKDKEGDKERKRSKDKKEKPKGGDAKSSSKSK-RSQGPVHITAGSE---PVPI 1438
Query: 2353 LAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSE 2402
E+E+++ D+E S+ + E P KA + +D D ++++ E
Sbjct: 1439 --GEDEEDDL-DQETF--SICK-ERMRPVKKALKQLDKPDKGLSVQEQLE 1482
Score = 54 (24.1 bits), Expect = 8.1e-09, Sum P(4) = 8.1e-09
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFST----MTRLLDVMEDYLTFKQYRYLRLDGHTSGGDR 297
G E++ + P+LK TD ++L T + L DYL + L +G +GG+
Sbjct: 1261 GNWELI-KTDPELKLTDKKILPVETDKKPQGKQLQTRADYLLKLLRKSLEKEGAVTGGEE 1319
Query: 298 GAL 300
L
Sbjct: 1320 AKL 1322
Score = 51 (23.0 bits), Expect = 5.0e-54, Sum P(2) = 5.0e-54
Identities = 33/148 (22%), Positives = 52/148 (35%)
Query: 1211 FNSP--NENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSP 1268
F+SP ++NP E K+D + +P +K + K ENK + +
Sbjct: 1345 FSSPRHSDNPSEEGEVKDDGL---EKSP-------TKKKQKKKENKENKEKQMSSRKDKE 1394
Query: 1269 DDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSS--EAPASTEAFEQE 1326
DK + + P G D +++S+ + E P+ E E F
Sbjct: 1395 GDKERKRSKDKKEKPKGGDAKSSSKSKRSQGPVHITAGSEPVPIGEDEEDDLDQETFSIC 1454
Query: 1327 KVTNTSSFVNLADLSSDDKTCSVTPAME 1354
K L L DK SV +E
Sbjct: 1455 KERMRPVKKALKQLDKPDKGLSVQEQLE 1482
Score = 51 (23.0 bits), Expect = 6.5e-54, Sum P(3) = 6.5e-54
Identities = 18/64 (28%), Positives = 25/64 (39%)
Query: 1242 LASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFD-IPIEKHNEQSRNQ 1300
L + +K ENKA I SSP P E G + P +K ++ N+
Sbjct: 1322 LTKRKPRVKKENKAPLKDEHGIEFSSPRHSDNPSEEG-EVKDDGLEKSPTKKKQKKKENK 1380
Query: 1301 NNPE 1304
N E
Sbjct: 1381 ENKE 1384
Score = 51 (23.0 bits), Expect = 1.1e-53, Sum P(4) = 1.1e-53
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
+++ S + + + + +V F+ +DE + D + V E E+ +EL
Sbjct: 988 ENEVSTSATDELLSQFKVANFATMEDEEELDERPHKDWDEIIPEEQRKKVEEEERQKELE 1047
Query: 1890 ----LPSLSSATKEEKIDGSLDKDPDS 1912
LP + S+TK+ + + S D D +S
Sbjct: 1048 EIYMLPRIRSSTKKAQTNDS-DSDTES 1073
Score = 49 (22.3 bits), Expect = 1.1e-53, Sum P(4) = 1.1e-53
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 1977 KETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKES 2033
KE A D+ I P H D P+ E K +G EK P +++ KE+
Sbjct: 1331 KENKAPLKDEHGIEFSS---PRHSDNPSEEG--EVKDDGLEKSPTKKKQKKKENKEN 1382
Score = 43 (20.2 bits), Expect = 4.5e-53, Sum P(3) = 4.5e-53
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 544 EFEKMCQAES-SDSPKLKEEGLEKSLPT 570
EF +++ S+ ++K++GLEKS PT
Sbjct: 1344 EFSSPRHSDNPSEEGEVKDDGLEKS-PT 1370
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 398 (145.2 bits), Expect = 6.2e-54, Sum P(4) = 6.2e-54
Identities = 84/172 (48%), Positives = 113/172 (65%)
Query: 241 CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL 300
CGKL+ L LL +LKA HRVL F+ MTR+LDV+E +LT+ + YLRLDG T R AL
Sbjct: 2042 CGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQAL 2101
Query: 301 IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
+++FN D F F+LS R+GGVGVNL ADTV+ +D+DWNP +D QAQ R HRIGQ RD
Sbjct: 2102 MERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 2160
Query: 361 VLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESL 412
V + R + +TVEE + A K + + +I G F T+A +++ + L
Sbjct: 2161 VHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF---TTAYFKQQTIREL 2209
Score = 278 (102.9 bits), Expect = 6.2e-54, Sum P(4) = 6.2e-54
Identities = 63/198 (31%), Positives = 97/198 (48%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V +T+Y+ ++ H + W Y+I+DE IKN + L ++ S RLLLTG
Sbjct: 725 FHVCITSYKLVLQDHQA--FRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 782
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F S +F +WF+ P + S + ++ R
Sbjct: 783 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEG-------LVKR 835
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLL---MKRVEENLGSIGNSKGR 199
LH+VLRPF+LRR+K VE ++P+K E ++RC S Q+ L ++
Sbjct: 836 LHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFM 895
Query: 200 SVHNSVMELRNICNHPYL 217
SV N +M+LR +CNHP L
Sbjct: 896 SVINILMQLRKVCNHPNL 913
Score = 73 (30.8 bits), Expect = 6.2e-20, Sum P(4) = 6.2e-20
Identities = 69/321 (21%), Positives = 115/321 (35%)
Query: 738 PSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSS 797
P+ GP P+ P L G S +S P P P +SP+ G S + P +
Sbjct: 1085 PNSGPLPQVLPSP----LGVLSGTSRPPAPTLSLKPAPPAPVRLSPAPPPGSSSLLKPLT 1140
Query: 798 AV------AALNSELNTNLATAXXXXXXXXXXXXXXM-QTKGQSRKTQSGGVTPRRRGKR 850
+A + +T ATA + + + SG V G+
Sbjct: 1141 VPPGYTFPSAAVTTTSTTTATAPTTAVPAPTPAPQRLILSPDMQARLPSGEVVSI--GQL 1198
Query: 851 QALGSPPISDVSAGPESKSNLQSENNSGGLRLS--KSVSMGKQDALSQELSNKIQV---- 904
+L P++ SAG Q + N L + + +++G+ L + + + +
Sbjct: 1199 ASLAQRPVA--SAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQH 1256
Query: 905 ----QPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMD 960
QP VA VA P P V V+ S+ P PA S P + QVP
Sbjct: 1257 HLISQPAHVALIQAVA-PT--PGPTPVSVLPSSTPSTTPAP-TGLSLPLAAN--QVPPTM 1310
Query: 961 LGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLPAL 1020
+ N K V+ + + + G+ P+ L+ + + T + + + P L
Sbjct: 1311 VNNTGV-VKIVVRQ--APRDGLTPVPPLAPAPRPPSSGLPAVLTPRPT-LTPGRLSTPTL 1366
Query: 1021 DSITEPYTGSTNTEGISNTIH 1041
S P ST + +H
Sbjct: 1367 GSARAPIPTSTLVRPLLKLVH 1387
Score = 68 (29.0 bits), Expect = 1.9e-18, Sum P(6) = 1.9e-18
Identities = 56/251 (22%), Positives = 93/251 (37%)
Query: 624 SPVPVVLPAPSGTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQPTT 683
+P+PV+ P+ + + + G ++++SL AQ ++ PS P+
Sbjct: 1613 APLPVLAPSQTSIPVLASSSTPGTPLASASSLVPAPAPALAPSSAQTMVPAPIPSPLPSP 1672
Query: 684 AFVPVA--PGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPG 741
A P + +++ S+P Q G G P + L L AS +P+P
Sbjct: 1673 ASTQTLALPSALASTLGGSSPSQTLSLGTGSPQGP-FPAQT-----LSLTPASSLVPAPA 1726
Query: 742 PDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSA-VKGQSGTIDP-SSAV 799
Q+ SL P G +S P P+ VSP + T+ P SS+
Sbjct: 1727 ---------QTLSLAP--GPPLGPSQTLSLAPAPPLAP-VSPMGPAPAHTLTLAPVSSSA 1774
Query: 800 AALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQS-RKTQSGGVTPRRRGKRQALGSP-P 857
A+L + + T QT + TQ+ G + +P P
Sbjct: 1775 ASLLAPPSVQTLTLSPAPVSVPAIGPVATQTLALAPASTQAPASQASSLGVSASGAAPLP 1834
Query: 858 ISDVSAGPESK 868
++ VS P SK
Sbjct: 1835 VTMVSRLPVSK 1845
Score = 67 (28.6 bits), Expect = 2.5e-19, Sum P(4) = 2.5e-19
Identities = 62/295 (21%), Positives = 100/295 (33%)
Query: 706 KGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTAT 765
+GR R ++ +P+ R + L+L A+ P P P PK + + L P + T
Sbjct: 960 EGRVSRYEADTFLPQHRLSR-RLLLEVAT--APDPPPRPKPVKMKVNRMLQPVPKQEGRT 1016
Query: 766 DGNVSS--IPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXXXXXX 823
V+S P PVP P + T P+ V L + L + + A
Sbjct: 1017 VVVVNSPRTPLGPVPVRPPPGSELSAQPTPGPTPPV--LPAPLMVSPSPAGPPLIPASRP 1074
Query: 824 XXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSA--GPESKSNLQSENNSGGLR 881
+ Q V P G PP +S P + L G
Sbjct: 1075 PGPVLLPPLQPNSGPLPQVLPSPLGVLSGTSRPPAPTLSLKPAPPAPVRLSPAPPPGSSS 1134
Query: 882 LSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPAT 941
L K +++ S + AT+ A P PA Q + ++ + LP+
Sbjct: 1135 LLKPLTVPPGYTFP---SAAVTTTSTTTATAPTTAVPAPTPAPQRL-ILSPDMQARLPSG 1190
Query: 942 HDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVER 996
S S AQ P G T ++ + G + LA+ + ++R
Sbjct: 1191 EVVSIGQLASL-AQRPVASAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQR 1244
Score = 65 (27.9 bits), Expect = 6.2e-54, Sum P(4) = 6.2e-54
Identities = 30/110 (27%), Positives = 49/110 (44%)
Query: 1961 SSEKDP-VSSQSVLEGSKETVAEAGDQMDISIMP--EKLP------EHLDIPASLATPEE 2011
SS P +++ SV G ++ V E + +S++P E++P L++P S A+ E
Sbjct: 2605 SSAPSPTLAAGSVPNGQEQEVPEPAEATILSVLPDGEEVPACLSESSKLELPPSAASDEL 2664
Query: 2012 KTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATP 2061
E E D +S + S E ++ VS A SS +TP
Sbjct: 2665 LQESLEADKNSEELVEAQTPTSTPEKPQEL-VSAEVAAPSTSSSAT-STP 2712
Score = 63 (27.2 bits), Expect = 1.1e-52, Sum P(4) = 1.1e-52
Identities = 50/238 (21%), Positives = 72/238 (30%)
Query: 552 ESSDSPKLKEEGLEKSLPTVVSSSAPAVYSTEXXXXXXXXXXXXXXXXXXXXS---KEVT 608
ES ++ K EE +E PT + S E + +
Sbjct: 2667 ESLEADKNSEELVEAQTPTSTPEKPQELVSAEVAAPSTSSSATSTPEGPSPARPPRRRTS 2726
Query: 609 PPSKXXXXXXXXADKSPVPVVL---PAPSGTVKVEKDAMTG---QSTSASASLPXXXXXX 662
+ + P P VL P TV EK+ + Q +AS +P
Sbjct: 2727 ADVEIRGQGAGRPGQPPGPKVLRKLPGRLVTVVEEKELVRRRRQQRGTASTLVPGVSETG 2786
Query: 663 XXXXXAQHVMVGIAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQ---SGEQVP 719
V SS PT+ AP S P+ QP RRI+ +G P
Sbjct: 2787 ASPGSPSTRSVSGPESSPPTSGPCEAAP----PSTLPTPTQQPFIARRRIELGVTGGGSP 2842
Query: 720 RR-RGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAP 776
G + + PA G PK N P S+ + G + + P
Sbjct: 2843 ENGEGALLAITPPAVKR---RRGRPPKKNRSPADAGRGVDEAPSSTSKGKTNGADSGP 2897
Score = 61 (26.5 bits), Expect = 1.6e-53, Sum P(4) = 1.6e-53
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 2293 EEKIEGFSKPVGSEKESIASAVPLDESKGPDA--EVSSQTAIEGGG 2336
EE++E K + KE + +P +E +GP A EVS T GGG
Sbjct: 2336 EEQVEAARKDLDQAKEEVFR-LPQEEEEGPGAGDEVSCGTG--GGG 2378
Score = 59 (25.8 bits), Expect = 6.0e-53, Sum P(5) = 6.0e-53
Identities = 24/107 (22%), Positives = 45/107 (42%)
Query: 2246 SASSIPRG-ESKGPD-AEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPV 2303
+A S+P G E + P+ AEA + G + + + L L S +E ++ +
Sbjct: 2613 AAGSVPNGQEQEVPEPAEATILSVLPDGEEVPACLSESSKLELPPSAASDELLQESLEAD 2672
Query: 2304 GSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPA 2350
+ +E + + P + P VS++ A + PE GP+
Sbjct: 2673 KNSEELVEAQTPTSTPEKPQELVSAEVAAPSTSSSATSTPE---GPS 2716
Score = 59 (25.8 bits), Expect = 1.4e-17, Sum P(6) = 1.4e-17
Identities = 74/354 (20%), Positives = 130/354 (36%)
Query: 624 SPVPVVLPAPSGTVKVEKDAMTGQSTSASA-SLPXXXXXXXXXXXAQ-HVMVGIAPSSQ- 680
S P + P S A G S SASA +L A H ++ +AP+S
Sbjct: 1483 SVTPTLAPVVSAATGPPSLAPVGASPSASALTLGLATTPSLSPSQAPGHPLL-LAPASSH 1541
Query: 681 -P---TT---AFVPV-APGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPA 732
P +T A PV P S A+ P+ P + + + + ++ +
Sbjct: 1542 VPGLNSTVAPACSPVLVPASALANPFPAAPNPAPAQASLLAPAPTASQALATSLAPMVAS 1601
Query: 733 ASDDIPSPGP-DPKTNEQPQSESLNPSGGEST-ATD-GNVSSIPTAPVPDSVSPSAVKGQ 789
+ + P P P S+ ST T + SS+ AP P +++PS+ +
Sbjct: 1602 PTAILAPPSSLAPLPVLAPSQTSIPVLASSSTPGTPLASASSLVPAPAP-ALAPSSAQ-- 1658
Query: 790 SGTIDPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGK 849
T+ P+ + L S +T A QT G +P+
Sbjct: 1659 --TMVPAPIPSPLPSPASTQ-TLALPSALASTLGGSSPSQT------LSLGTGSPQGPFP 1709
Query: 850 RQALGSPPISDVSAGPESKSNLQSENNSGG---LRLSKSVSMGKQDALSQELSNKIQVQP 906
Q L P S + P +L G L L+ + + + ++ + + P
Sbjct: 1710 AQTLSLTPASSLVPAPAQTLSLAPGPPLGPSQTLSLAPAPPLAPVSPMGPAPAHTLTLAP 1769
Query: 907 CGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPA--QVPS 958
+++A + P P+ Q++ + S P+++PA ++Q PA Q P+
Sbjct: 1770 VS-SSAASLLAP---PSVQTLTL--SPAPVSVPAIGPVATQTLALAPASTQAPA 1817
Score = 58 (25.5 bits), Expect = 9.1e-18, Sum P(6) = 9.1e-18
Identities = 41/141 (29%), Positives = 59/141 (41%)
Query: 673 VGIAPSSQPTTAFVPVAPGSQ-SASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLP 731
V + PSS P+T P +A+ P T + G + + Q PR + + P
Sbjct: 1280 VSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVV--RQAPRDGLTPVPPLAP 1337
Query: 732 AASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSS-IPTA----PVPDSV-SPSA 785
A PS G +P +L P G ST T G+ + IPT+ P+ V SPS
Sbjct: 1338 APRP--PSSGLPAVLTPRP---TLTP-GRLSTPTLGSARAPIPTSTLVRPLLKLVHSPSP 1391
Query: 786 VKGQSGTIDPSSAVAALNSEL 806
S P +A A++S L
Sbjct: 1392 EVNASA---PGAAPLAISSPL 1409
Score = 57 (25.1 bits), Expect = 2.8e-18, Sum P(5) = 2.8e-18
Identities = 30/107 (28%), Positives = 44/107 (41%)
Query: 705 PKGRGRRIQSGEQVPRRRGKKIGLVLPAASD--DIPSPGPDPKTNEQPQSESLNPSGGE- 761
PK GR + PR + + P S+ P+PGP P P S +P+G
Sbjct: 1010 PKQEGRTVVVVNS-PRTPLGPVPVRPPPGSELSAQPTPGPTPPVLPAPLMVSPSPAGPPL 1068
Query: 762 --STATDGNVSSIP----TAPVPDSVSPSAVKGQSGTIDPSSAVAAL 802
++ G V P + P+P V PS + SGT P + +L
Sbjct: 1069 IPASRPPGPVLLPPLQPNSGPLPQ-VLPSPLGVLSGTSRPPAPTLSL 1114
Score = 55 (24.4 bits), Expect = 3.4e-17, Sum P(5) = 3.4e-17
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 2278 VPQDLGLPLSSSDVEEEKIEGFSKPVGSEKE-SIASAVPLDESKGPDAEVSSQTAIEGGG 2336
VP L P+SS + + PV S ++S++P+ S A S I
Sbjct: 1411 VPSSLPGPVSSP-MPVPNSSPLASPVSSAVSVPVSSSLPISISTTLPAPASVPLTIP--- 1466
Query: 2337 VVSIPVPEEADGPA 2350
+S P+P A GPA
Sbjct: 1467 -ISAPLPVSASGPA 1479
Score = 53 (23.7 bits), Expect = 1.4e-52, Sum P(4) = 1.4e-52
Identities = 23/77 (29%), Positives = 31/77 (40%)
Query: 690 PGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQ 749
PG + P + PK R R++ G VP +K+ A PG ++ Q
Sbjct: 3101 PGGLELTP-PVVSLAPKLRSTRLRPGSLVPPLETEKVPRKRAGAPAG-GGPGLAKRSRLQ 3158
Query: 750 PQSESLNPSGG--ESTA 764
P S L P G ES A
Sbjct: 3159 PPSP-LGPEGSVEESEA 3174
Score = 53 (23.7 bits), Expect = 7.0e-18, Sum P(5) = 7.0e-18
Identities = 23/109 (21%), Positives = 38/109 (34%)
Query: 671 VMVGIAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVL 730
V+ G + PT + P P S P + + G P
Sbjct: 1100 VLSGTSRPPAPTLSLKPAPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPSAAVTTTSTTT 1159
Query: 731 PAA-SDDIPSPGPDP-KTNEQPQSESLNPSGGESTATDGNVSSIPTAPV 777
A + +P+P P P + P ++ PSG + G ++S+ PV
Sbjct: 1160 ATAPTTAVPAPTPAPQRLILSPDMQARLPSG--EVVSIGQLASLAQRPV 1206
Score = 53 (23.7 bits), Expect = 2.8e-17, Sum P(6) = 2.8e-17
Identities = 35/140 (25%), Positives = 53/140 (37%)
Query: 677 PSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGE---QVPRRRGKKIGLVLPAA 733
P+ P P GS A ST ++P + S E P I LP
Sbjct: 1354 PTLTPGRLSTPTL-GSARAPIPTSTLVRPLLKLVHSPSPEVNASAPGAAPLAISSPLPVP 1412
Query: 734 SDDIPSP--GPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSG 791
S +P P P P N P + ++ + ++ +S T P P SV P + S
Sbjct: 1413 SS-LPGPVSSPMPVPNSSPLASPVSSAVSVPVSSSLPISISTTLPAPASV-PLTIP-ISA 1469
Query: 792 TIDPSSAVAALNSELNTNLA 811
+ S++ AL + + LA
Sbjct: 1470 PLPVSASGPALLTSVTPTLA 1489
Score = 52 (23.4 bits), Expect = 5.4e-17, Sum P(5) = 5.4e-17
Identities = 66/328 (20%), Positives = 114/328 (34%)
Query: 673 VGIAPSSQPTTAFV-PVAPGSQSASACPSTPMQPKGRGR-RIQSGEQVPRRRGKKIGLVL 730
+G A + PT+ V P+ S S P G I S VP + +
Sbjct: 1366 LGSARAPIPTSTLVRPLLKLVHSPS--PEVNASAPGAAPLAISSPLPVPSSLPGPVSSPM 1423
Query: 731 PAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVS-SIP-TAPVPDSVS-PSAVK 787
P + P P P S SL S + +V +IP +AP+P S S P+ +
Sbjct: 1424 PVPNSS-PLASPVSSAVSVPVSSSLPISISTTLPAPASVPLTIPISAPLPVSASGPALLT 1482
Query: 788 GQSGTIDPS-SAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRR 846
+ T+ P SA S + + ++ +
Sbjct: 1483 SVTPTLAPVVSAATGPPSLAPVGASPSASALTLGLATTPSLSPSQAPGHPLLLAPASSHV 1542
Query: 847 RGKRQALGSPPISDVSAGPESKSN-LQSENNSGGLRLSK-SVSMGKQDALSQELSNKIQV 904
G + +P S V + +N + N + S + + AL+ L+ +
Sbjct: 1543 PGLNSTV-APACSPVLVPASALANPFPAAPNPAPAQASLLAPAPTASQALATSLAPMVAS 1601
Query: 905 QPCGVATSADVAG-PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGN 963
+A + +A P P++ S+ V+ S+ P SS P+ + PA PS
Sbjct: 1602 PTAILAPPSSLAPLPVLAPSQTSIPVLASSSTPGTPLASASSLVPAPA-PALAPSSAQTM 1660
Query: 964 VASDTKEVLSENSSSKGGVIPILALSNM 991
V + L +S++ +P S +
Sbjct: 1661 VPAPIPSPLPSPASTQTLALPSALASTL 1688
Score = 50 (22.7 bits), Expect = 6.0e-53, Sum P(5) = 6.0e-53
Identities = 36/140 (25%), Positives = 56/140 (40%)
Query: 1193 SDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPE 1252
S C+ P TPPP P LT + +R PVS + + L PE
Sbjct: 2495 SCSSACTPPPAC-TPPPAHTPPPAQTSLLTPSC-PLLLRLPSVPVSP-PVTNLPLGLGPE 2551
Query: 1253 NK--AQA-GRIENI--ANSSPDDKS-LPMVPNLETAPPGFDI-PI-EKHNEQSRNQNNPE 1304
+ AQA E++ A+ + + S + VP + P +I P+ EK+ + + +P
Sbjct: 2552 AELCAQAVASTESLELADMASSETSPVTFVPPKDLLPVAVEILPMSEKNLSLASSAPSPT 2611
Query: 1305 VKGEETP--VSSEAPASTEA 1322
+ P E P EA
Sbjct: 2612 LAAGSVPNGQEQEVPEPAEA 2631
Score = 50 (22.7 bits), Expect = 2.8e-18, Sum P(5) = 2.8e-18
Identities = 23/79 (29%), Positives = 31/79 (39%)
Query: 911 TSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKE 970
TS V P + S P PA SS+Q PA +PS ++ T
Sbjct: 1623 TSIPVLASSSTPGTP-LASASSLVPAPAPALAPSSAQTM--VPAPIPSPLPSPASTQTLA 1679
Query: 971 VLSENSSSKGGVIPILALS 989
+ S +S+ GG P LS
Sbjct: 1680 LPSALASTLGGSSPSQTLS 1698
Score = 49 (22.3 bits), Expect = 2.9e-52, Sum P(4) = 2.9e-52
Identities = 41/179 (22%), Positives = 67/179 (37%)
Query: 1301 NNPEVKGEETPVSSEAPASTEAFEQEKVTN--TS--SFVNLADLSSDDKTCSVTPAMETA 1356
N P G E + ++A ASTE+ E + + TS +FV DL + P E
Sbjct: 2543 NLPLGLGPEAELCAQAVASTESLELADMASSETSPVTFVPPKDLLP--VAVEILPMSEKN 2600
Query: 1357 PGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGI-----EVFKPENKTDGDSVEKL 1411
+G+ + + + P P EA + + EV P ++ +E
Sbjct: 2601 LSLASSAPSPTLAAGSVPNGQEQ--EVPEPAEATILSVLPDGEEV--PACLSESSKLELP 2656
Query: 1412 EDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKA 1470
D L++E + + ++V P +T E P E L+ PS S A
Sbjct: 2657 PSAASDE-LLQESLEADKNSEELVEAQTPTSTPEK----PQE--LVSAEVAAPSTSSSA 2708
Score = 48 (22.0 bits), Expect = 7.3e-50, Sum P(5) = 7.3e-50
Identities = 34/139 (24%), Positives = 53/139 (38%)
Query: 677 PSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSG-EQVPRRRGKKIGLVLPAASD 735
P+ P A P P +Q++ PS P+ + + +P G + L A +
Sbjct: 2504 PACTPPPAHTP--PPAQTSLLTPSCPLLLRLPSVPVSPPVTNLPLGLGPEAELCAQAVAS 2561
Query: 736 -------DIPSPGPDPKTNEQPQSESLNPSGGESTA-TDGNVSSIPTAPVPDSVSPSAVK 787
D+ S P T P+ L P E ++ N+S +AP P + S
Sbjct: 2562 TESLELADMASSETSPVTFVPPKD--LLPVAVEILPMSEKNLSLASSAPSPTLAAGSVPN 2619
Query: 788 GQSGTIDPSSAVAALNSEL 806
GQ + P A A + S L
Sbjct: 2620 GQEQEV-PEPAEATILSVL 2637
Score = 47 (21.6 bits), Expect = 6.2e-54, Sum P(4) = 6.2e-54
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 947 QPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEE 1004
+PSGS+ P + VAS +L + I A + KA + + F E
Sbjct: 2216 EPSGSSVPSAPEDEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNE 2273
Score = 47 (21.6 bits), Expect = 7.3e-50, Sum P(5) = 7.3e-50
Identities = 31/125 (24%), Positives = 54/125 (43%)
Query: 837 TQSGGVTPRRRGKRQALGSPPISDV-SAGPESKSNLQSENNSGGLRLSKSVSMGK--QDA 893
T + G P G+ Q + P + + S P+ + + S L L S + + Q++
Sbjct: 2611 TLAAGSVPN--GQEQEVPEPAEATILSVLPDGEEVPACLSESSKLELPPSAASDELLQES 2668
Query: 894 LSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSS-SQPSGST 952
L + N ++ TS P+ KP E +V + + P+T S+ S P G +
Sbjct: 2669 LEAD-KNSEELVEAQTPTST----PE-KPQE----LVSAE--VAAPSTSSSATSTPEGPS 2716
Query: 953 PAQVP 957
PA+ P
Sbjct: 2717 PARPP 2721
Score = 46 (21.3 bits), Expect = 1.4e-52, Sum P(4) = 1.4e-52
Identities = 21/80 (26%), Positives = 30/80 (37%)
Query: 621 ADKSPVPVVLPAPSGTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQ 680
++ SPV V P V VE M+ ++ S ++S P Q V P
Sbjct: 2573 SETSPVTFVPPKDLLPVAVEILPMSEKNLSLASSAPSPTLAAGSVPNGQEQEV---PEPA 2629
Query: 681 PTTAFVPVAPGSQSASACPS 700
T + V P + AC S
Sbjct: 2630 EAT-ILSVLPDGEEVPACLS 2648
Score = 46 (21.3 bits), Expect = 4.1e-17, Sum P(4) = 4.1e-17
Identities = 19/66 (28%), Positives = 25/66 (37%)
Query: 2316 LDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVS-Q 2374
L S P+ S+ A +PVP GP S + N PV S+VS
Sbjct: 1385 LVHSPSPEVNASAPGAAPLAISSPLPVPSSLPGPVS--SPMPVPNSSPLASPVSSAVSVP 1442
Query: 2375 IESKEP 2380
+ S P
Sbjct: 1443 VSSSLP 1448
Score = 45 (20.9 bits), Expect = 4.3e-17, Sum P(5) = 4.3e-17
Identities = 33/147 (22%), Positives = 52/147 (35%)
Query: 622 DKSPVPVVLPAP----SGTVKVEKDAMTGQ-STSASASL-PXXXXXXXXXXXAQHVMVGI 675
+ P+P VLP+P SGT + ++ + + A L P V G
Sbjct: 1086 NSGPLPQVLPSPLGVLSGTSRPPAPTLSLKPAPPAPVRLSPAPPPGSSSLLKPLTVPPGY 1145
Query: 676 A-PSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAAS 734
PS+ TT A +A P+ Q +Q+ ++P IG + A
Sbjct: 1146 TFPSAAVTTTSTTTATAPTTAVPAPTPAPQRLILSPDMQA--RLPSGEVVSIGQLASLAQ 1203
Query: 735 DDIPSPGPDPKTNEQPQSESLNPSGGE 761
+ S G Q Q L +G +
Sbjct: 1204 RPVASAGGSKPLTFQIQGNKLTLTGAQ 1230
Score = 43 (20.2 bits), Expect = 1.6e-52, Sum P(5) = 1.6e-52
Identities = 9/51 (17%), Positives = 23/51 (45%)
Query: 890 KQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPA 940
+++ ++ + ++ ++ C D+ Q AEQ + + N+ PA
Sbjct: 2229 EEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFPA 2279
Score = 43 (20.2 bits), Expect = 1.2e-51, Sum P(4) = 1.2e-51
Identities = 35/155 (22%), Positives = 60/155 (38%)
Query: 1241 TLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQ 1300
TLA+ + E + I + PD + +P + E++ ++P +++ +
Sbjct: 2611 TLAAGSVPNGQEQEVPEPAEATILSVLPDGEEVPACLS-ESSK--LELPPSAASDELLQE 2667
Query: 1301 NNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAP--- 1357
+ K E V ++ P ST QE V S+ V SS + P+ P
Sbjct: 2668 SLEADKNSEELVEAQTPTSTPEKPQELV---SAEVAAPSTSSSATSTPEGPSPARPPRRR 2724
Query: 1358 -GFDIPIE-KGVEQSGTEIDAKVKWKNTPLPGEAI 1390
D+ I +G + G KV K LPG +
Sbjct: 2725 TSADVEIRGQGAGRPGQPPGPKVLRK---LPGRLV 2756
Score = 43 (20.2 bits), Expect = 3.2e-19, Sum P(4) = 3.2e-19
Identities = 14/56 (25%), Positives = 22/56 (39%)
Query: 1512 PTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDAIVNNLLETPLDIKSIGGP 1567
P S + P +SAV S +P + P+ + + PL + S GP
Sbjct: 1424 PVPNSSPLASPVSSAVSVPVSSSLPISISTTLPAPASVPLTIPISAPLPV-SASGP 1478
Score = 43 (20.2 bits), Expect = 4.4e-17, Sum P(6) = 4.4e-17
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1200 VTPTVETPPPGFNSPNENP 1218
V P VE PPP ++ + P
Sbjct: 1979 VMPPVEAPPPSLHACHPPP 1997
Score = 42 (19.8 bits), Expect = 1.8e-52, Sum P(3) = 1.8e-52
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 2365 KEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSE 2402
+EP GSSV E E A + +++ A+ E
Sbjct: 2215 EEPSGSSVPSAPEDEEETVASKQTHILEQALCRAEDEE 2252
Score = 42 (19.8 bits), Expect = 2.0e-52, Sum P(5) = 2.0e-52
Identities = 22/82 (26%), Positives = 31/82 (37%)
Query: 707 GRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTN-EQPQSESLNPSGGESTAT 765
G G R + P R G ++ L A + P T+ +S S P S A
Sbjct: 2376 GGGHRRSKKAKAPERPGTRVSERLRGARAETQGANHTPVTSTHHTRSTSTPPRC--SPAR 2433
Query: 766 DGNVSSIPTA-PVPDSVSPSAV 786
D P P P S +P+A+
Sbjct: 2434 DRVPRPAPRPRPTPAS-APAAI 2454
Score = 42 (19.8 bits), Expect = 1.5e-51, Sum P(4) = 1.5e-51
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 2250 IPRGESKGPDAEANNIIDAEGGGNMRQT 2277
+P+ E +GP A + + GGG R++
Sbjct: 2356 LPQEEEEGPGA-GDEVSCGTGGGGHRRS 2382
Score = 42 (19.8 bits), Expect = 1.9e-18, Sum P(6) = 1.9e-18
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 468 TDGEPLP-PLPSRLVTDDDLKA 488
T P P P P RL+ D++A
Sbjct: 1164 TTAVPAPTPAPQRLILSPDMQA 1185
Score = 41 (19.5 bits), Expect = 7.3e-50, Sum P(5) = 7.3e-50
Identities = 29/136 (21%), Positives = 47/136 (34%)
Query: 839 SGGVTPRR-RGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQE 897
+GG +P G A+ P + P K+ ++ G S S GK +
Sbjct: 2837 TGGGSPENGEGALLAITPPAVKRRRGRPPKKNRSPADAGRGVDEAPSSTSKGKTNGADSG 2896
Query: 898 LSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINL-PATHDSSSQPSGSTPAQV 956
+ + V + GP Q Q + +PI L P +P + +
Sbjct: 2897 PGAETLIVAEPVLAPQLIPGP-QPLGPQPIH---RPEPIILSPVEKRRRGRPPKARDLPI 2952
Query: 957 P---SMDLGNVASDTK 969
P S GN+ S T+
Sbjct: 2953 PGTISSGDGNIESRTQ 2968
Score = 41 (19.5 bits), Expect = 9.7e-29, Sum P(5) = 9.7e-29
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 149 PFVLRRLKHKVENELPEKIERL 170
PF L L+ K + + E++ER+
Sbjct: 1883 PFYLDSLEEKRKQQRSERLERI 1904
Score = 41 (19.5 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 1978 ETVAEAGDQMDISIMPEKLPEHLDIPASLATP 2009
+ VA +S++P P P L+ P
Sbjct: 1269 QAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLP 1300
Score = 41 (19.5 bits), Expect = 1.1e-16, Sum P(5) = 1.1e-16
Identities = 25/107 (23%), Positives = 40/107 (37%)
Query: 675 IAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAAS 734
+ P+S+P V + P ++ P P G + SG P + PA
Sbjct: 1068 LIPASRPPGP-VLLPPLQPNSGPLPQVLPSPLG----VLSGTSRPPAPTLSLKPAPPAPV 1122
Query: 735 DDIPSPGPDPKTNEQPQSESLN---PSGGESTATDGNVSSIPTAPVP 778
P+P P + +P + PS +T T ++ PT VP
Sbjct: 1123 RLSPAPPPGSSSLLKPLTVPPGYTFPSAAVTT-TSTTTATAPTTAVP 1168
Score = 40 (19.1 bits), Expect = 6.3e-19, Sum P(4) = 6.3e-19
Identities = 23/95 (24%), Positives = 37/95 (38%)
Query: 1429 PDHSDMVIGNVPGNTSEDSS--KMPLETPL-IMKSTEGPSVSMKADDVADHSRETPILSG 1485
P S M + N S SS +P+ + L I ST P+ + + S P+ +
Sbjct: 1418 PVSSPMPVPNSSPLASPVSSAVSVPVSSSLPISISTTLPAPASVPLTIPI-SAPLPVSAS 1476
Query: 1486 SPINSGTECSTVSVKTDVGNHPQNVEPTSASPERS 1520
P + T++ P ++ P ASP S
Sbjct: 1477 GPALLTSVTPTLAPVVSAATGPPSLAPVGASPSAS 1511
Score = 39 (18.8 bits), Expect = 6.9e-51, Sum P(5) = 6.9e-51
Identities = 21/95 (22%), Positives = 38/95 (40%)
Query: 1760 PSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPE--GGVIVPEHKSENMGEKDDI 1817
P+ A + S ++ + + L E K++L P A + E + + SE + E
Sbjct: 2628 PAEATILS---VLPDGEEVPACLSESSKLELPPSAASDELLQESLEADKNSEELVEAQTP 2684
Query: 1818 SSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSP 1852
+S LV + A+ + P+ G SP
Sbjct: 2685 TSTPEKPQELVSAEVAAPSTSSSATSTPE--GPSP 2717
Score = 38 (18.4 bits), Expect = 5.1e-52, Sum P(5) = 5.1e-52
Identities = 14/59 (23%), Positives = 22/59 (37%)
Query: 733 ASDDIPSPGPDPKTNEQ------PQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSA 785
A D +P P P P+ P + S +T ++ +P +P PSA
Sbjct: 2432 ARDRVPRPAPRPRPTPASAPAAIPAPIPVPVSAPIPISTPNPITMLPVHILPSPPLPSA 2490
Score = 38 (18.4 bits), Expect = 2.2e-17, Sum P(5) = 2.2e-17
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 1429 PDHSDMV--IGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDV 1473
P H ++ + PG T S +P TP + G S+ + A+ V
Sbjct: 1262 PAHVALIQAVAPTPGPTPV--SVLPSSTPSTTPAPTGLSLPLAANQV 1306
Score = 38 (18.4 bits), Expect = 1.7e-15, Sum P(5) = 1.7e-15
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 2302 PVGSEKES-IASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPAS 2351
PV S ++S +P+ S + VSS ++ + I + PAS
Sbjct: 1410 PVPSSLPGPVSSPMPVPNSSPLASPVSSAVSVPVSSSLPISISTTLPAPAS 1460
Score = 37 (18.1 bits), Expect = 1.1e-52, Sum P(4) = 1.1e-52
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 1208 PPGFNSPNENPGELTGTKNDASV 1230
PP N P+ P +L D+SV
Sbjct: 3011 PPK-NPPSPRPSQLPVLDRDSSV 3032
Score = 37 (18.1 bits), Expect = 5.5e-50, Sum P(4) = 5.5e-50
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 472 PLPPLPSRL 480
PLPPLP L
Sbjct: 2975 PLPPLPPLL 2983
Score = 37 (18.1 bits), Expect = 2.7e-17, Sum P(5) = 2.7e-17
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 1255 AQAGRIENIANS-SPDDKS-LPM-VPNLETAPPGFDIPIEKHNEQSRNQNNPEV 1305
A I+ +A + P S LP P+ AP G +P+ + NN V
Sbjct: 1263 AHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGV 1316
Score = 37 (18.1 bits), Expect = 5.4e-17, Sum P(5) = 5.4e-17
Identities = 12/51 (23%), Positives = 20/51 (39%)
Query: 1083 PTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLR 1133
P AP+R +P G V +L +Q + GSK ++ +
Sbjct: 1168 PAPTPAPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVASAGGSKPLTFQ 1218
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 597 (215.2 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
Identities = 152/408 (37%), Positives = 215/408 (52%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L + W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 1120 KFHAVITTFEMILT--DCPELRNVPWRCVIIDEAHRLKNRNCKLLEGLKMMDMEHKVLLT 1177
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXX--I 139
GTP F S F Q F GD + +
Sbjct: 1178 GTPLQNTVEELFSLLNFLEPDRFPSESTFMQEF-------GDLKTEEQVQKLQGILKPMM 1230
Query: 140 INRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKR-VEENLGSIGNSKG 198
+ RL + + + + + +E EL ++ R L K G G S
Sbjct: 1231 LRRLKEDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNFAFLSKSGAGGGSGGGGGSNV 1290
Query: 199 RSVHNSVMELRNICNHPYL-----SQLHAE--EVDTLI-PKHYLPPIVRLCGKLEMLDRL 250
++ N++MELR CNHPYL ++ E E L P+ +L +++ GKL ++D+L
Sbjct: 1291 PNLLNTMMELRKCCNHPYLINGAEEKIMEEFRETHPLDQPEFHLQAMIQAAGKLVLIDKL 1350
Query: 251 LPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSP 310
LPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ DS
Sbjct: 1351 LPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSD 1410
Query: 311 FFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQ 370
F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1411 RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRN 1470
Query: 371 TVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLRE 415
+ E ++ A KLG+ QS++ N + ++ +E LLR+
Sbjct: 1471 SYEREMFDKASLKLGLDKAVLQSMSGRENAANGVQQLSKKEIEDLLRK 1518
Score = 83 (34.3 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
Identities = 36/150 (24%), Positives = 63/150 (42%)
Query: 2297 EGFSKPVGSEKESIASAVPLDES-KGPDAEVSSQTAIEGGGVVSIPVPE-EADGPASFLA 2354
+G PV +P DE K +V+ +E G + + + EA P +
Sbjct: 2219 KGVELPVIVSDPLTPLTLPKDEEVKEEQGDVTLPK-VENGSIEDVKEEKSEALSPKKEVK 2277
Query: 2355 AEEEKNECSDKEPVGSSVSQIESKE-PEAKA-FEPMDVVDGAVALENTSEGMGGPSPPLV 2412
EE++N K+ ++E K+ E K E + VDG V + + P+ L
Sbjct: 2278 NEEDENGLGPKQEPKEEKMEVEEKDVTEFKTDVEQVCPVDGMVEKKPMDQE---PTDTLP 2334
Query: 2413 IAEDKTENEIEEDPVVNSVAVEESKGSEAD 2442
+EDK + +E P N ++ E++ E +
Sbjct: 2335 SSEDKNAQDEKELPTGNKLSTEKASEDEEE 2364
Score = 62 (26.9 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 36/154 (23%), Positives = 57/154 (37%)
Query: 2175 EEEKTELSCEKQPIGSSVD-DESKGPEVEPCVQMDVRGD--GIVPETVPEELGLPSSPMV 2231
+EE+ +++ K GS D E K + P ++ D G+ P+ P+E +
Sbjct: 2243 KEEQGDVTLPKVENGSIEDVKEEKSEALSPKKEVKNEEDENGLGPKQEPKEEKMEVEEKD 2302
Query: 2232 VXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAEGGGNMRQTVPQDLGLPLSSSDV 2291
V P + E K D E + + + N + G LS+
Sbjct: 2303 VTEFKTDVEQVC-PVDGMV---EKKPMDQEPTDTLPSSEDKNAQDEKELPTGNKLSTEKA 2358
Query: 2292 EEEKIEGFSKPVGSEKESIASAVPLDESKGPDAE 2325
E++ E + SEK S A L E K D E
Sbjct: 2359 SEDEEEKMDEDDKSEKSSQAEVGALSERKNFDEE 2392
Score = 61 (26.5 bits), Expect = 4.1e-51, Sum P(3) = 4.1e-51
Identities = 37/143 (25%), Positives = 64/143 (44%)
Query: 1777 KADVVLDEHGKVQLLPGADNPEGGVI-VPEHKSENMGEKDDISSEH-AFGSSLVLQDKAS 1834
K + V +E G V L P +N G + V E KSE + K ++ +E G + K
Sbjct: 2238 KDEEVKEEQGDVTL-PKVEN--GSIEDVKEEKSEALSPKKEVKNEEDENGLGPKQEPKEE 2294
Query: 1835 EAEIGDR-IDEPQVDGFSPRSMSGVVDE--LVDEAGDHMGVSHSPVHVVEREKSEELGLP 1891
+ E+ ++ + E + D + G+V++ + E D + S E+E L
Sbjct: 2295 KMEVEEKDVTEFKTDVEQVCPVDGMVEKKPMDQEPTDTLPSSEDKNAQDEKELPTGNKLS 2354
Query: 1892 S-LSSATKEEKIDGSLDKDPDSN 1913
+ +S +EEK+D DK S+
Sbjct: 2355 TEKASEDEEEKMDED-DKSEKSS 2376
Score = 54 (24.1 bits), Expect = 2.2e-50, Sum P(3) = 2.2e-50
Identities = 64/314 (20%), Positives = 113/314 (35%)
Query: 701 TPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGG 760
T P + Q +++P G K+ A+ D+ D K+ + Q+E S
Sbjct: 2330 TDTLPSSEDKNAQDEKELPT--GNKLSTE-KASEDEEEKMDEDDKSEKSSQAEVGALSER 2386
Query: 761 ESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXXX 820
++ + N +S+ TA D + + ++PS++ L +
Sbjct: 2387 KNFDEESN-ASLSTAR--DETNETRDCFSVDDVEPSASQMFSERSLFSFWPKDRVMINRM 2443
Query: 821 XXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGL 880
M+ K S + Q G P+ S G S S + S L
Sbjct: 2444 DNICEAVMKGKWPSNRRQFFDFPGLLPGYSSMATESPLQRRSLGDLSLVGQTSYSGSEDL 2503
Query: 881 RLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSN-----QP 935
+S V+ K DALS + + + + + A+ A + E ++ +S+ Q
Sbjct: 2504 TMSPQVN--KDDALSLSVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESHAEGQAQA 2561
Query: 936 INLP-ATHDSSSQPSGST-PAQVPSMDLGNVASDTKEVLSENSSSK----GGVIPILALS 989
I+L A H SS S S P + S E+L +SS+ G ++ +
Sbjct: 2562 IDLTKALHSVSSSSSASAFPGAMAS---SATLKAQMELLQPGASSRPRANGSLLDTELPN 2618
Query: 990 NMKAVERVNIQSFE 1003
K R N++ E
Sbjct: 2619 RRKRGRRKNVEGLE 2632
Score = 51 (23.0 bits), Expect = 1.4e-49, Sum P(4) = 1.4e-49
Identities = 12/60 (20%), Positives = 26/60 (43%)
Query: 1727 LVASDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHG 1786
++ SD + +P+D V GD+ + +E G + + ++ + DE+G
Sbjct: 2225 VIVSDPLTPLTLPKDEEVKEEQGDVTLPKVENGSIEDVKEEKSEALSPKKEVKNEEDENG 2284
Score = 51 (23.0 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 35/162 (21%), Positives = 51/162 (31%)
Query: 635 GTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQPTTAFVPVAPGSQS 694
G K EK A T SA A A S T AF P + +
Sbjct: 2957 GDEKEEKQAEKSSETVESADATGDAAALNAAAAA-----AAAGMSTGTLAFNPFLLSTMA 3011
Query: 695 ASAC-PSTPMQPKGRGRRIQSGEQVPRRRGKK-IGLVLPAASDDIPSPGPDPKTNEQPQS 752
PS + P G I Q + + L A +D S P+TN+ P +
Sbjct: 3012 PGLFYPSMFLPPSLGGLAIPGFPQASLADLQSAVSGALGATGEDKESD-KGPRTNQDPNA 3070
Query: 753 ESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTID 794
+ ++T D + SV + G + +D
Sbjct: 3071 SVADVETADNTLEDSDSEESQNKTADSSVLDDDLAGPAEEMD 3112
Score = 51 (23.0 bits), Expect = 4.5e-49, Sum P(4) = 4.5e-49
Identities = 30/142 (21%), Positives = 55/142 (38%)
Query: 1400 ENKTDGDSVEKLEDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIM- 1458
E KTD + V ++ V+ + +E P D ++D ++P L
Sbjct: 2305 EFKTDVEQVCPVDGMVEKKPMDQEPTDTLPSSED--------KNAQDEKELPTGNKLSTE 2356
Query: 1459 KSTEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKT--DVGNHPQN---VEPT 1513
K++E M DD ++ S + + + S + E S S+ T D N ++ V+
Sbjct: 2357 KASEDEEEKMDEDDKSEKSSQAEVGALSERKNFDEESNASLSTARDETNETRDCFSVDDV 2416
Query: 1514 SASPERSGPQNSAVGFCDKSEI 1535
S + + S F K +
Sbjct: 2417 EPSASQMFSERSLFSFWPKDRV 2438
Score = 50 (22.7 bits), Expect = 1.4e-49, Sum P(4) = 1.4e-49
Identities = 22/76 (28%), Positives = 32/76 (42%)
Query: 1797 PEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMS 1856
P G + E SE+ EK D + +K+S+AE+G + D S S+S
Sbjct: 2348 PTGNKLSTEKASEDEEEKMDEDDK---------SEKSSQAEVGALSERKNFDEESNASLS 2398
Query: 1857 GVVDELVDEAGDHMGV 1872
DE +E D V
Sbjct: 2399 TARDE-TNETRDCFSV 2413
Score = 47 (21.6 bits), Expect = 9.2e-49, Sum P(4) = 9.2e-49
Identities = 26/110 (23%), Positives = 40/110 (36%)
Query: 1957 KIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTE-- 2014
K++ S +D +S K+ V D+ + E E +++ T E KT+
Sbjct: 2253 KVENGSIEDVKEEKSEALSPKKEVKNEEDENGLGPKQEPKEEKMEVEEKDVT-EFKTDVE 2311
Query: 2015 ------GS-EKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSED 2057
G EK P P A D+ + G EK+SED
Sbjct: 2312 QVCPVDGMVEKKPMDQEPTDTLPSSEDKNAQDEKELPTGNKLSTEKASED 2361
Score = 47 (21.6 bits), Expect = 9.2e-49, Sum P(4) = 9.2e-49
Identities = 52/184 (28%), Positives = 75/184 (40%)
Query: 1936 VVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAG-DQMDISIMPE 1994
++ E LS CQPS L W G ++D +L G+ A+ G + D I+ +
Sbjct: 2157 LLEERLS-LCQPSPDLPAWWEP--GRHDRD------LLRGA----AKHGVSRTDYHILND 2203
Query: 1995 KLPEHLDIPASLATPEEKTEGSE-----KDPDSSFAAQEDPKESVVEAGDQM--GVSLGG 2047
PE + A + K G E DP + +D +E E GD V G
Sbjct: 2204 --PELSFLEAYRKFTQGK--GVELPVIVSDPLTPLTLPKD-EEVKEEQGDVTLPKVENGS 2258
Query: 2048 AT-VMEKSSEDLATPPLSLANEE-EMIEGFDNDPTGISMAVMDSKECAAEAAD--QMCVS 2103
V E+ SE L+ P + NEE E G +P M V + K+ D Q+C
Sbjct: 2259 IEDVKEEKSEALS-PKKEVKNEEDENGLGPKQEPKEEKMEV-EEKDVTEFKTDVEQVCPV 2316
Query: 2104 EGCV 2107
+G V
Sbjct: 2317 DGMV 2320
Score = 46 (21.3 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 1776 AKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSENMGEKDDI 1817
AKA + ++ G + AD EG PE+K M KDD+
Sbjct: 1878 AKA-IAAEQRGADMM---ADGVEGEEEDPEYKPLRMSFKDDL 1915
Score = 45 (20.9 bits), Expect = 4.5e-49, Sum P(4) = 4.5e-49
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 921 KPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSK 979
K E V V P+ LP + + T +P ++ G++ D KE SE S K
Sbjct: 2219 KGVELPVIVSDPLTPLTLPKDEEVKEEQGDVT---LPKVENGSI-EDVKEEKSEALSPK 2273
Score = 43 (20.2 bits), Expect = 4.1e-51, Sum P(3) = 4.1e-51
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 2015 GSEKDPDSSFAAQEDPKESV--VEAGDQMGVSLGGATVMEKSSE------DLATPPLSLA 2066
G +K+ D +DP SV VE D K+++ DLA P +
Sbjct: 3053 GEDKESDKGPRTNQDPNASVADVETADNTLEDSDSEESQNKTADSSVLDDDLAGPAEEMD 3112
Query: 2067 NEEEMIEGFDND 2078
+ E ++ D+D
Sbjct: 3113 SMEGGMDDEDDD 3124
Score = 43 (20.2 bits), Expect = 1.4e-49, Sum P(4) = 1.4e-49
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 2170 AETVQEEEKTELSCEKQPIGSSVDDESKGPEVE 2202
A+ E+ +E S K S +DD+ GP E
Sbjct: 3078 ADNTLEDSDSEESQNKTADSSVLDDDLAGPAEE 3110
Score = 42 (19.8 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 909 VATSADVAGPDQKPAEQSVRVVQS-NQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASD 967
V+ + G D K +++ R Q N + T D++ + S S +Q + D + D
Sbjct: 3045 VSGALGATGED-KESDKGPRTNQDPNASVADVETADNTLEDSDSEESQNKTADSSVLDDD 3103
Query: 968 TKEVLSENSSSKGGV 982
E S +GG+
Sbjct: 3104 LAGPAEEMDSMEGGM 3118
Score = 41 (19.5 bits), Expect = 1.5e-48, Sum P(4) = 1.5e-48
Identities = 27/115 (23%), Positives = 45/115 (39%)
Query: 874 ENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADV--AGPDQKPAEQSVRVVQ 931
+ G + L K V G + + +E S + + V D GP Q+P E+ + V +
Sbjct: 2243 KEEQGDVTLPK-VENGSIEDVKEEKSEALSPKK-EVKNEEDENGLGPKQEPKEEKMEVEE 2300
Query: 932 SN-----QPINLPATHDS--SSQPSGSTPAQ-VPSMDLGNVASDTKEVLSENSSS 978
+ + D +P P +PS + N A D KE+ + N S
Sbjct: 2301 KDVTEFKTDVEQVCPVDGMVEKKPMDQEPTDTLPSSEDKN-AQDEKELPTGNKLS 2354
Score = 39 (18.8 bits), Expect = 3.5e-49, Sum P(4) = 3.5e-49
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 1905 SLDKDPDSNLVVLEDSKGSIGDQMDCCQSGV 1935
S +K DS+ VL+D ++MD + G+
Sbjct: 3090 SQNKTADSS--VLDDDLAGPAEEMDSMEGGM 3118
Score = 38 (18.4 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 538 EQWTEEEFEKMCQAESSDSPKLKEEG 563
E+ +E+E EKM + + S+ E G
Sbjct: 2356 EKASEDEEEKMDEDDKSEKSSQAEVG 2381
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 375 (137.1 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 107/295 (36%), Positives = 148/295 (50%)
Query: 199 RSVHNSVMELRNICNHPY-LSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 257
+ + N VM+ R CN P+ AE+ P +V GK+ +LDRL+P L
Sbjct: 587 KKMQNPVMQARLACNSPHNFYWPWAED-----PSSIDETLVTASGKMLLLDRLIPCLLNK 641
Query: 258 DHRVLFFSTMTRLLDVMEDYLT-FKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
H++L FS LD+++D+ T + + R+DG S DR A I FN D + IFLL
Sbjct: 642 GHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQIKAFNT-DKDYKIFLL 700
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG G+NL AADTVI+FD+DWNPQ DLQAQ RAHRIGQ + V+V R T TVE+ +
Sbjct: 701 STRAGGQGINLVAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPVIVYRLATKGTVEQTL 760
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDR-REYLESLLRECKKEEXXXXXXXXXXXXXXX 435
A+ K + I G F + S R+ ++ L R ++E
Sbjct: 761 LEKADSKRRLERLVIQKGKFKSLLSESTMSRDDVDELKRALGEDEFERFEASADPASIL- 819
Query: 436 RSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTD---DDLK 487
S+ ++ V R EE A K GL DG+ + ++ D D LK
Sbjct: 820 -SDEDLRVLTD----RSEEAYALAEK---GLDVDGKAFKAVETKRDGDNLMDQLK 866
Score = 278 (102.9 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 62/169 (36%), Positives = 91/169 (53%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F V+ T+YE MN DR L++ QW YII+DEGHR+KN +C+L +L Y S++RLL+TG
Sbjct: 306 FPVVCTSYEICMN--DRKFLAQYQWRYIIVDEGHRLKNMNCRLIKELLSYNSANRLLITG 363
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP IFN F WF+ F S DN+ +++
Sbjct: 364 TPLQNNITELWSLLHFLLPEIFNDLNSFQNWFD--FSSVLDNNGQTDMIERRKRT-LVST 420
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLG 191
+H +L+PF+LRR+K VE+ LP+K E ++ + QK L + + G
Sbjct: 421 MHSILKPFLLRRVKTDVESALPKKREYILYAPLTLEQKDLYREILNGTG 469
Score = 51 (23.0 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 1071 VSVPVK--RHGR-KTPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGS 1127
VS P K R R TP + + RR K + I D F++KL + Q D
Sbjct: 503 VSTPNKSVRSSRDSTPGSRASSTRRRKAPQTYKDISDRE--FNSKLRKLEQGLEEDLDIE 560
Query: 1128 KTISLRSKQETADVNDVARVMKEI 1151
++I ++E N + +EI
Sbjct: 561 ESIDESEQEEIERANTIKLAKREI 584
Score = 49 (22.3 bits), Expect = 5.1e-18, Sum P(3) = 5.1e-18
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 438 ESEIDVFESVDKQRREE-EMATWRKLIR 464
E ++D+ ES+D+ +EE E A KL +
Sbjct: 554 EEDLDIEESIDESEQEEIERANTIKLAK 581
Score = 43 (20.2 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 2247 ASSIPRGESKGPDAEANNIIDAEGGGNMR---QTVPQDLGLPLSSSDVEEEKIE 2297
ASS R K P +I D E +R Q + +DL + S + E+E+IE
Sbjct: 522 ASSTRR--RKAPQTY-KDISDREFNSKLRKLEQGLEEDLDIEESIDESEQEEIE 572
Score = 39 (18.8 bits), Expect = 5.1e-18, Sum P(3) = 5.1e-18
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 477 PSRLVTDDDLKALYE-AMKIYDAPKTGVSPN------VGVKRKGEHL 516
P+ +++D+DL+ L + + + Y + G+ + V KR G++L
Sbjct: 815 PASILSDEDLRVLTDRSEEAYALAEKGLDVDGKAFKAVETKRDGDNL 861
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 620 (223.3 bits), Expect = 1.5e-53, Sum P(4) = 1.5e-53
Identities = 145/393 (36%), Positives = 214/393 (54%)
Query: 32 YLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXX 91
Y M D L I+W +I+DEGHR+KN KL + L Y S+HR+LLTGTP
Sbjct: 401 YEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDE 460
Query: 92 XXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFV 151
F S E+F + F + N + I+RLH++L P +
Sbjct: 461 LFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQ--------------ISRLHKMLAPHL 503
Query: 152 LRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSIGNSKGR---SVHNSVMEL 208
LRR+K V ++P K E ++R + S+ QK K + + KG S++N +MEL
Sbjct: 504 LRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGAQISLNNIMMEL 563
Query: 209 RNICNHPYLSQLHAEEVDTLI--PKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFST 266
R +C HPY+ E V+ +I ++ CGKL++LD+++ KLK HRVL ++
Sbjct: 564 RKVCCHPYM----LEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQ 619
Query: 267 MTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVN 326
+LD++EDY T K+++Y R+DG G +R ID+FN ++S F FLLS RAGG+G+N
Sbjct: 620 FQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGIN 679
Query: 327 LQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 386
L ADTVII+D+DWNP DLQA ARAHR+GQ V++ R T+EE++ + K+ V
Sbjct: 680 LATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKM-V 738
Query: 387 ANQSITAGFFDNNTSAEDRREYLESLLRECKKE 419
+ N + E+ L+ ++R KE
Sbjct: 739 LEHLVVGKLKTQNINQEE----LDDIIRYGSKE 767
Score = 203 (76.5 bits), Expect = 3.0e-08, Sum P(5) = 3.0e-08
Identities = 63/204 (30%), Positives = 99/204 (48%)
Query: 14 SREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQ 73
S++K + KF+VLLT+YE ++N D L I+W +I+DEGHR+KN KL + L Y
Sbjct: 387 SKQKRI--KFDVLLTSYE-MINL-DSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYS 442
Query: 74 SSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXX 133
S+HR+LLTGTP F S E+F + F + N +
Sbjct: 443 SNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQ------IS 493
Query: 134 XXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSI 193
+ L + ++ V++ + K E L + L + Y K + R + L
Sbjct: 494 RLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQK----EYYKAIFTRNYQVLTKK 549
Query: 194 GNSKGRSVHNSVMELRNICNHPYL 217
G ++ S++N +MELR +C HPY+
Sbjct: 550 GGAQ-ISLNNIMMELRKVCCHPYM 572
Score = 52 (23.4 bits), Expect = 2.1e-52, Sum P(5) = 2.1e-52
Identities = 22/71 (30%), Positives = 30/71 (42%)
Query: 918 PDQKPAEQSVRVVQS-NQPIN--LPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSE 974
P +S R ++S N IN L T D S T P DL NV + K+ E
Sbjct: 1286 PPSTKVNESFRALKSINGNINTILSITSDQSKSHEDDTK---P--DLNNV--EMKDTAEE 1338
Query: 975 NSSSKGGVIPI 985
+GGV+ +
Sbjct: 1339 TKPLRGGVVDL 1349
Score = 50 (22.7 bits), Expect = 1.5e-53, Sum P(4) = 1.5e-53
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 1703 NGNVEVLCGGTGDKKADCKMEPDCLVASDSVNMELVPRDFGVGRRDGDIEIFNMEGGPSN 1762
NGN+ + T D+ E D ++V M+ + R G +++ +EG +
Sbjct: 1302 NGNINTILSITSDQSKS--HEDDTKPDLNNVEMKDTAEETKP-LRGGVVDLNVVEGEENI 1358
Query: 1763 ALLSSSKDIIAESAKAD 1779
A S S D+ E AK +
Sbjct: 1359 AEASGSVDVKMEEAKEE 1375
Score = 45 (20.9 bits), Expect = 1.5e-53, Sum P(4) = 1.5e-53
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 1209 PGFNSPNENPGELTGTKNDASVRG 1232
PG + N+NPG + N+AS G
Sbjct: 1134 PGAQT-NQNPGSVITGNNNASADG 1156
Score = 43 (20.2 bits), Expect = 1.5e-53, Sum P(4) = 1.5e-53
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 747 NEQPQSESLNPSGGESTATDGNVSSI 772
N QP S +N S + +GN+++I
Sbjct: 1283 NNQPPSTKVNESFRALKSINGNINTI 1308
Score = 42 (19.8 bits), Expect = 1.5e-53, Sum P(4) = 1.5e-53
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 691 GSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGK 724
G +S A ST + G+G +Q+G + RR+G+
Sbjct: 902 GDESYEA-ESTDGEAAGQG--VQTGRRPYRRKGR 932
Score = 40 (19.1 bits), Expect = 1.5e-53, Sum P(4) = 1.5e-53
Identities = 16/78 (20%), Positives = 32/78 (41%)
Query: 940 ATHDSSSQPSGSTPAQVPSMD--LGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERV 997
A+ D + SG ++D L + +EV S + + G + ++N + ++
Sbjct: 770 ASEDDEAGKSGKIHYDDAAIDKLLDRDLVEAEEV-SVDDEEENGFLKAFKVANFEYIDEN 828
Query: 998 NIQSFEEKACTNASKSKA 1015
+ E + SKS A
Sbjct: 829 EAAALEAQRVAAESKSSA 846
Score = 40 (19.1 bits), Expect = 5.4e-52, Sum P(5) = 5.4e-52
Identities = 19/85 (22%), Positives = 39/85 (45%)
Query: 1884 KSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVV---VPEN 1940
KS + ++ S T ++ D PD N V ++D+ ++ + GVV V E
Sbjct: 1299 KSINGNINTILSITSDQSKSHEDDTKPDLNNVEMKDT----AEETKPLRGGVVDLNVVEG 1354
Query: 1941 LSDFCQPSSSLAPWEAKIDGSSEKD 1965
+ + S S+ + K++ + E++
Sbjct: 1355 EENIAEASGSV---DVKMEEAKEEE 1376
Score = 40 (19.1 bits), Expect = 5.4e-52, Sum P(5) = 5.4e-52
Identities = 29/146 (19%), Positives = 62/146 (42%)
Query: 1958 IDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSE 2017
+DG + DP++S+ ++ G+ +A +++I+ ++ + LD A E +
Sbjct: 1231 LDGLPKTDPITSEEIM-GAAVDNNQA--RVEIAQHYNQMCKLLDENA-----RESVQAYV 1282
Query: 2018 KDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANEEEMIEGFDN 2077
+ S E + ++ + L + KS ED P L+ ++ E
Sbjct: 1283 NNQPPSTKVNESFR-ALKSINGNINTILSITSDQSKSHEDDTKPDLNNVEMKDTAEETKP 1341
Query: 2078 DPTGI-SMAVMDSKECAAEAADQMCV 2102
G+ + V++ +E AEA+ + V
Sbjct: 1342 LRGGVVDLNVVEGEENIAEASGSVDV 1367
Score = 39 (18.8 bits), Expect = 2.1e-52, Sum P(5) = 2.1e-52
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 861 VSAGPESKSNLQSENNSGG 879
+S ++ LQ +N SGG
Sbjct: 1113 ISLSAAEQAGLQGQNGSGG 1131
Score = 37 (18.1 bits), Expect = 2.1e-52, Sum P(5) = 2.1e-52
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 1857 GVVDELVDEAGDHMGVSHSPVHV-VEREKSEE 1887
GVVD V E +++ + V V +E K EE
Sbjct: 1345 GVVDLNVVEGEENIAEASGSVDVKMEEAKEEE 1376
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 376 (137.4 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 84/222 (37%), Positives = 129/222 (58%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL LD LL +LK+ HRVL +S MTR++D++E+Y+ ++++ Y+RLDG + +R ++
Sbjct: 1109 GKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMV 1168
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
F Q + F+FLLS RAGG+G+NL AADTVI +D+DWNP VD QA RAHR+GQ + V
Sbjct: 1169 ADF-QNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV 1227
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL--RECKKE 419
V R T+EE++ A+ K + I+ G F +T +E + LL E +K+
Sbjct: 1228 TVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKP--KEVVSLLLDDEELEKK 1285
Query: 420 EXXXXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRK 461
E + + +K+++E+E+ RK
Sbjct: 1286 LRQRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELDGKRK 1327
Score = 295 (108.9 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 71/222 (31%), Positives = 119/222 (53%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V++T+Y+ ++ D +++W Y+++DE +K++S L +Q +RLLLTG
Sbjct: 629 FHVVITSYQLVVQ--DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTG 686
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F+S E+F++WF+K ES+ +N ++R
Sbjct: 687 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENK-------SAIDENQLSR 739
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLG-------SIGN 195
LH +L+PF+LRR+K VENEL +KIE L+ C+ ++ QKLL + ++ + S+G
Sbjct: 740 LHMILKPFMLRRIKKDVENELSDKIEILMYCQQTSRQKLLYQALKNKISIDDLLQSSMGT 799
Query: 196 SKGR-----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH 232
++ S+ N VM+ R +CNHP L E +T P H
Sbjct: 800 TQQAQTTTSSLMNLVMQFRKVCNHPELF----ERQETWSPFH 837
Score = 46 (21.3 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 1932 QSGVVVPENLSDFCQPSSSLAPWEAKID-GSS 1962
Q+ ++ P L+DF PSS+ +P + + G+S
Sbjct: 1501 QTAIIRPSGLADF-GPSSASSPLSSPLSKGNS 1531
Score = 41 (19.5 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 528 KRAREV--RSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSS 574
KR +E R E + E++ + + E K K+EG+ +P V S+
Sbjct: 1293 KRQQEETNRVKERKRKREKYAEKKKKEDELDGKRKKEGMNLVIPFVPSA 1341
Score = 38 (18.4 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 519 LDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLE 565
LD + + R R+ +++ T E+ + E K KE+ L+
Sbjct: 1277 LDDEELEKKLRQRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELD 1323
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 594 (214.2 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 144/363 (39%), Positives = 203/363 (55%)
Query: 26 LLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPX 85
+L T ++ K D+ L + W +I +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 588 ILLTTYEILLK-DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 646
Query: 86 XXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQ 145
F E FS W + FE + LH+
Sbjct: 647 QNSLKELWSLLH------FIMPEKFSSW--EDFEEEHGKGREYGYAS----------LHK 688
Query: 146 VLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRSVH- 202
L PF+LRR+K VE LP K+E+++R E SA QK K + N ++ SKG +
Sbjct: 689 ELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGF 748
Query: 203 -NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRV 261
N +MEL+ CNH YL + + + + L ++R GKL +LD+LL +L+ +RV
Sbjct: 749 LNIMMELKKCCNHCYLIK-PPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV 807
Query: 262 LFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAG 321
L FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FLLS RAG
Sbjct: 808 LIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG 867
Query: 322 GVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAE 381
G+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE + A+
Sbjct: 868 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAK 927
Query: 382 HKL 384
K+
Sbjct: 928 KKM 930
Score = 187 (70.9 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 63/198 (31%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 585 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 642
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S EDF + K E ++
Sbjct: 643 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------YASLHKELEPFLLR 696
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L GS G++ G
Sbjct: 697 RV----KKDVEKSLPAKVEQILRMEMSALQK----QYYKWILTRNYKALSKGSKGSTSG- 747
Query: 200 SVHNSVMELRNICNHPYL 217
N +MEL+ CNH YL
Sbjct: 748 -FLNIMMELKKCCNHCYL 764
Score = 64 (27.6 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 66/303 (21%), Positives = 120/303 (39%)
Query: 1824 GSSLVLQDKASEAE-IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHS----PVH 1878
G L+D +S E G R+ + V G + R +SGV + + +SH P+H
Sbjct: 1175 GCIKALKDSSSGTERTGGRLGK--VKGPTFR-ISGV------QVNAKLVISHEEELIPLH 1225
Query: 1879 VVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV--LEDSKGS---IGDQMDCCQS 1933
EE ++ TK D K+ DSNL++ E GS I D +
Sbjct: 1226 KSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLT 1285
Query: 1934 GVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEG---SKETVAEAGDQMDIS 1990
++P++ D + L + +D ++ + L G SK A A + + +
Sbjct: 1286 HKILPDD-PDKKPQAKQLQTRADYLIKLLSRD-LAKKEALSGAGSSKRRKARA--KKNKA 1341
Query: 1991 IMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATV 2050
+ K+ E + +S E+ E +K +S +E K+S V + G
Sbjct: 1342 MKSIKVKEEIKSDSSPLPSEKSDEDDDKLSESKSDGRERSKKSSVSDAPVHITASGEPVP 1401
Query: 2051 MEKSSEDLATPPLSLANE-----EEMIEGFDNDPTGISMA--VMDSKECAAEAADQM--C 2101
+ + SE+L S+ E + ++ D G+S + +++C + D + C
Sbjct: 1402 ISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITEC 1461
Query: 2102 VSE 2104
+ E
Sbjct: 1462 LKE 1464
Score = 45 (20.9 bits), Expect = 1.5e-51, Sum P(2) = 1.5e-51
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 835 RKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSN---LQSE-NNSGGLRLSKSVSMGK 890
++ SG + +RR K +A + + + E KS+ L SE ++ +LS+S S G+
Sbjct: 1320 KEALSGAGSSKRR-KARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKLSESKSDGR 1378
Query: 891 QDALSQELSNK-IQVQPCG--VATSADVAGPDQK 921
+ + +S+ + + G V S + DQK
Sbjct: 1379 ERSKKSSVSDAPVHITASGEPVPISEESEELDQK 1412
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 625 (225.1 bits), Expect = 1.8e-53, Sum P(3) = 1.8e-53
Identities = 154/408 (37%), Positives = 221/408 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ LS I W +++DE HR+KN +L+ Y +R+LLT
Sbjct: 734 KFHVLLTSYECI--NMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLT 791
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP FN E F+ F++ S D I
Sbjct: 792 GTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEI--SKEDQ---------------IE 834
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG-- 198
+LH +L P +LRRLK V +P K E +VR E SA QK K + N ++ G
Sbjct: 835 KLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGT 894
Query: 199 -RSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N +MEL+ CNHPYL E L Y +++ GK +L ++L KLK
Sbjct: 895 QMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKD 954
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT +LD++ED+ + Y+Y R+DG +G R ID++N + F+FLL
Sbjct: 955 GGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLL 1014
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHR+GQK V++ RF T +VEE++
Sbjct: 1015 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERI 1074
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR----ECKKEE 420
+ A+ K+ + + + AG + + + E L+ +LR E KEE
Sbjct: 1075 TSVAKKKMLLTHLVVRAGLGAKDGKSMSKTE-LDDVLRWGTEELFKEE 1121
Score = 46 (21.3 bits), Expect = 1.8e-53, Sum P(3) = 1.8e-53
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 1110 DAKLNQHSQNKSRDSFGSKTISLRSKQETADVNDVARVMKE 1150
D + +H N+ SF T + + + D D V+KE
Sbjct: 1164 DGEKKEHWTNEYLSSFKVATYNTKEADDADDDEDETEVIKE 1204
Score = 41 (19.5 bits), Expect = 1.8e-53, Sum P(3) = 1.8e-53
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 2336 GVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVS 2373
G +S V E A +S A ++E + SDK+ +S +
Sbjct: 1743 GSISAAVAE-ASRASSIAATKDEPMDTSDKDIPSTSAA 1779
Score = 39 (18.8 bits), Expect = 3.0e-53, Sum P(3) = 3.0e-53
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 2007 ATPEEKTEGSEKD-PDSSFAA 2026
AT +E + S+KD P +S AA
Sbjct: 1760 ATKDEPMDTSDKDIPSTSAAA 1780
Score = 38 (18.4 bits), Expect = 1.3e-52, Sum P(3) = 1.3e-52
Identities = 10/58 (17%), Positives = 23/58 (39%)
Query: 1360 DIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDD 1417
D +++ E+ G + + K W N L + + D D E +++ ++
Sbjct: 1151 DFLLDRNKEEEGQDGEKKEHWTNEYLSSFKVATYNTKEADDADDDEDETEVIKEGTEE 1208
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 625 (225.1 bits), Expect = 1.8e-53, Sum P(3) = 1.8e-53
Identities = 154/408 (37%), Positives = 221/408 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ LS I W +++DE HR+KN +L+ Y +R+LLT
Sbjct: 734 KFHVLLTSYECI--NMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLT 791
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP FN E F+ F++ S D I
Sbjct: 792 GTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEI--SKEDQ---------------IE 834
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG-- 198
+LH +L P +LRRLK V +P K E +VR E SA QK K + N ++ G
Sbjct: 835 KLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGT 894
Query: 199 -RSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N +MEL+ CNHPYL E L Y +++ GK +L ++L KLK
Sbjct: 895 QMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKD 954
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT +LD++ED+ + Y+Y R+DG +G R ID++N + F+FLL
Sbjct: 955 GGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLL 1014
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHR+GQK V++ RF T +VEE++
Sbjct: 1015 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERI 1074
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR----ECKKEE 420
+ A+ K+ + + + AG + + + E L+ +LR E KEE
Sbjct: 1075 TSVAKKKMLLTHLVVRAGLGAKDGKSMSKTE-LDDVLRWGTEELFKEE 1121
Score = 46 (21.3 bits), Expect = 1.8e-53, Sum P(3) = 1.8e-53
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 1110 DAKLNQHSQNKSRDSFGSKTISLRSKQETADVNDVARVMKE 1150
D + +H N+ SF T + + + D D V+KE
Sbjct: 1164 DGEKKEHWTNEYLSSFKVATYNTKEADDADDDEDETEVIKE 1204
Score = 41 (19.5 bits), Expect = 1.8e-53, Sum P(3) = 1.8e-53
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 2336 GVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVS 2373
G +S V E A +S A ++E + SDK+ +S +
Sbjct: 1743 GSISAAVAE-ASRASSIAATKDEPMDTSDKDIPSTSAA 1779
Score = 39 (18.8 bits), Expect = 3.0e-53, Sum P(3) = 3.0e-53
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 2007 ATPEEKTEGSEKD-PDSSFAA 2026
AT +E + S+KD P +S AA
Sbjct: 1760 ATKDEPMDTSDKDIPSTSAAA 1780
Score = 38 (18.4 bits), Expect = 1.3e-52, Sum P(3) = 1.3e-52
Identities = 10/58 (17%), Positives = 23/58 (39%)
Query: 1360 DIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDD 1417
D +++ E+ G + + K W N L + + D D E +++ ++
Sbjct: 1151 DFLLDRNKEEEGQDGEKKEHWTNEYLSSFKVATYNTKEADDADDDEDETEVIKEGTEE 1208
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 500 (181.1 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 105/250 (42%), Positives = 156/250 (62%)
Query: 140 INRLHQVLRPFVLRRLKHKV-ENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSK 197
I+RLHQ+L P +LRRLK V ++++P K E ++R + S+ QK + K V N + +
Sbjct: 422 ISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKR 481
Query: 198 GRSVHNSVMELRNICNHPYLS---QLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKL 254
+ N +M+LR +C+HPYL + E+ + K ++ GKL++LD+++ KL
Sbjct: 482 DAKISNVLMKLRQVCSHPYLLPDFEPRFEDANEAFTK-----LLEASGKLQLLDKMMVKL 536
Query: 255 KATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIF 314
K HRVL ++ L ++EDY TFK + Y R+DG SG +R ID+FN ++S F F
Sbjct: 537 KEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCF 596
Query: 315 LLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEE 374
LLS RAGG+G+NL ADTVII+D+DWNP DLQA AR HR+GQ V++ R TVEE
Sbjct: 597 LLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEE 656
Query: 375 QVRASAEHKL 384
++ ++K+
Sbjct: 657 RMMEITKNKM 666
Score = 153 (58.9 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 41/95 (43%), Positives = 48/95 (50%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLTTYE M LS I+W +IIDEGHR+KN KL + L + S H +LLT
Sbjct: 327 KFDVLLTTYE--MVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLT 384
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNK 116
GTP F S E F Q NK
Sbjct: 385 GTPLQNNLNELFALMHFLDADKFGSLEKF-QDINK 418
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 592 (213.5 bits), Expect = 2.3e-53, P = 2.3e-53
Identities = 142/353 (40%), Positives = 197/353 (55%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++ +K V KF+VLLT+YE + D+ L I+W +++DE HR+KN K L
Sbjct: 782 VFRMKKEVQIKFHVLLTSYELITI--DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 839
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
Y+ ++LLLTGTP FN+ E F + F D S +
Sbjct: 840 YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ-- 890
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVE 187
I +LH +L P +LRRLK V +P K E +VR E S Y K ++ R
Sbjct: 891 --------IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 942
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEM 246
E L S G S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +
Sbjct: 943 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 1002
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN
Sbjct: 1003 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1062
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKR 359
+ F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ +
Sbjct: 1063 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNK 1115
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 398 (145.2 bits), Expect = 2.3e-53, Sum P(5) = 2.3e-53
Identities = 84/172 (48%), Positives = 113/172 (65%)
Query: 241 CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL 300
CGKL+ L LL +LKA HRVL F+ MTR+LDV+E +LT+ + YLRLDG T R AL
Sbjct: 2042 CGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQAL 2101
Query: 301 IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
+++FN D F F+LS R+GGVGVNL ADTV+ +D+DWNP +D QAQ R HRIGQ RD
Sbjct: 2102 MERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 2160
Query: 361 VLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESL 412
V + R + +TVEE + A K + + +I G F T+A +++ + L
Sbjct: 2161 VHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF---TTAYFKQQTIREL 2209
Score = 278 (102.9 bits), Expect = 2.3e-53, Sum P(5) = 2.3e-53
Identities = 63/198 (31%), Positives = 97/198 (48%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V +T+Y+ ++ H + W Y+I+DE IKN + L ++ S RLLLTG
Sbjct: 718 FHVCITSYKLVLQDHQA--FRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 775
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F S +F +WF+ P + S + ++ R
Sbjct: 776 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEG-------LVKR 828
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLL---MKRVEENLGSIGNSKGR 199
LH+VLRPF+LRR+K VE ++P+K E ++RC S Q+ L ++
Sbjct: 829 LHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFM 888
Query: 200 SVHNSVMELRNICNHPYL 217
SV N +M+LR +CNHP L
Sbjct: 889 SVINILMQLRKVCNHPNL 906
Score = 80 (33.2 bits), Expect = 2.3e-53, Sum P(5) = 2.3e-53
Identities = 49/207 (23%), Positives = 86/207 (41%)
Query: 2214 IVPETVPEELGLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAEGGGN 2273
+V + P LG PS P + P A + + E ++ +E +
Sbjct: 2520 LVTPSSPLLLGPPSVP--ISASVTNLPLGLRPEAELCAQALASPESLELASVASSETS-S 2576
Query: 2274 MRQTVPQDLGLPLSSS--DVEEEKIEGFSKPVGSEKESIASAVPL-DESKGPD-AEVSSQ 2329
+ P+DL LP++ V E+ + P A ++P E + PD AE ++
Sbjct: 2577 LSLVPPKDL-LPVAVEILPVSEKNLS--LTPSAPSLTLEAGSIPNGQEQEAPDSAEGTTL 2633
Query: 2330 TAIEGGGVVSIPVPEEADG---PASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFE 2386
T + G + + V E++G P S A++E E + + ++ E+K P + +
Sbjct: 2634 TVLPEGEELPLCV-SESNGLELPPS-AASDEPLQEPLEADRTSEELT--EAKTPTSSPEK 2689
Query: 2387 PMDVVDGAVALENTSEGMG----GPSP 2409
P ++V VA +TS GPSP
Sbjct: 2690 PQELVTAEVAAPSTSSSATSSPEGPSP 2716
Score = 80 (33.2 bits), Expect = 3.5e-19, Sum P(7) = 3.5e-19
Identities = 43/169 (25%), Positives = 69/169 (40%)
Query: 624 SPVPVVLPAPSGTVKVEKD---AMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQ 680
+PVP LP+P+ T + A T +S S +L Q + + A S
Sbjct: 1666 APVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLV 1725
Query: 681 PTTA-FVPVAPG-----SQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAAS 734
PT A + +APG +Q+ S P+ P+ P + L+ PA+
Sbjct: 1726 PTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASV 1785
Query: 735 DDIP-SPGPDPKTNEQP-QSESLNPSGGESTATDGN---VSSIPTAPVP 778
+ SP P P Q+ +L P+ +S A+ + VS+ AP+P
Sbjct: 1786 QTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLP 1834
Score = 79 (32.9 bits), Expect = 4.5e-20, Sum P(5) = 4.5e-20
Identities = 71/288 (24%), Positives = 108/288 (37%)
Query: 731 PAASDDIPS---PGPDPKTNEQPQSESL-----NPSG---GESTATDGNVSSIPTAPVPD 779
PA IP+ PGP QP S SL +P G G S +S PT P P
Sbjct: 1055 PAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPV 1114
Query: 780 SVSPSAVKGQSGTIDPSSA--------VAALNSELNTNLATAXXXXXXXXXXXXXXMQTK 831
+SP+ G S + P + AA + T AT +
Sbjct: 1115 RLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPD 1174
Query: 832 GQSRKTQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLS--KSVSMG 889
Q+R SG V G+ +L P+++ AG Q + N L + + +++G
Sbjct: 1175 MQAR-LPSGEVVSI--GQLASLAQRPVAN--AGGSKPLTFQIQGNKLTLTGAQVRQLAVG 1229
Query: 890 KQDALSQELSNKIQV--------QPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPAT 941
+ L + + + + QP VA VA P P V V+ S+ P PA
Sbjct: 1230 QPRPLQRNVVHLVSAGGQHHLISQPAHVALIQAVA-PT--PGPTPVSVLPSSTPSTTPAP 1286
Query: 942 HDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALS 989
S P + QVP + N K V+ + + + G+ P+ L+
Sbjct: 1287 -TGLSLPLAAN--QVPPTMVNNTGV-VKIVVRQ--APRDGLTPVPPLA 1328
Score = 72 (30.4 bits), Expect = 2.1e-18, Sum P(7) = 2.1e-18
Identities = 37/128 (28%), Positives = 55/128 (42%)
Query: 675 IAPSSQPTTAFVPV---APGSQSASACPSTP---MQPKGR-GRRIQSGEQVPRRRG---- 723
+APS P A +PV +PG+ A TP M P G + S VP
Sbjct: 1598 LAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAP 1657
Query: 724 KKIGLVLPAASDDIPSPGPDP-KTNEQPQSESLNPS-GGESTATDGNVSS-IPTAPVPD- 779
+LPA +PSP P P T + +L P+ GG S + ++ + P P P
Sbjct: 1658 SSTQTMLPAP---VPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQ 1714
Query: 780 --SVSPSA 785
S++P++
Sbjct: 1715 TLSLTPAS 1722
Score = 69 (29.3 bits), Expect = 4.1e-18, Sum P(7) = 4.1e-18
Identities = 45/187 (24%), Positives = 72/187 (38%)
Query: 624 SPVPVVLPAPSGTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQPTT 683
+P+PV+ P+P G V + T A +S P A + +APSS T
Sbjct: 1607 APLPVLAPSP-GAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPV--LAPSSTQTM 1663
Query: 684 AFVPV-----APGS-QSASACPS-TP-MQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASD 735
PV +P S Q+ + P+ P + + + G P+ L L AS
Sbjct: 1664 LPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASS 1723
Query: 736 DIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDP 795
+P+P Q+ SL P G +S P P+ + + T+ P
Sbjct: 1724 LVPTPA---------QTLSLAP--GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAP 1772
Query: 796 SSAVAAL 802
+S+ A+L
Sbjct: 1773 ASSSASL 1779
Score = 61 (26.5 bits), Expect = 2.1e-51, Sum P(5) = 2.1e-51
Identities = 36/160 (22%), Positives = 56/160 (35%)
Query: 630 LPAPSGTVKVEKDAMTG--QSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQPTTAFVP 687
LP TV EK+ + Q A+++L + V P S P P
Sbjct: 2750 LPGRLVTVVEEKELVRRRRQQRGAASTLVPGVSETSASPGSPSVRSMSGPESSP-----P 2804
Query: 688 VAPGSQSA--SACPSTPMQPKGRGRRIQ---SGEQVPRRR-GKKIGLVLPAASDDIPSPG 741
+ ++A S+ P+ P QP R I+ +G P G + + PA G
Sbjct: 2805 IGGPCEAAPSSSLPTPPQQPFIARRHIELGVTGGGSPENGDGALLAITPPAVKR---RRG 2861
Query: 742 PDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSV 781
PK N P S+ G + P P+++
Sbjct: 2862 RPPKKNRSPADAGRGVDEAPSSTLKGKTNGADPVPGPETL 2901
Score = 61 (26.5 bits), Expect = 9.4e-18, Sum P(8) = 9.4e-18
Identities = 32/134 (23%), Positives = 52/134 (38%)
Query: 676 APSSQPTTAFVPV-APGSQSASACPSTPMQ-PKGRGRRIQSGEQVPRRRGKKIGLVLPAA 733
AP + P T P+ P S A S+PM P V + + +P
Sbjct: 1389 APGAAPLTISSPLHVPSSLPGPA--SSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTT 1446
Query: 734 SDDIPSPGPDPKTNEQPQSESLNPSGGE--STATDGNVSSIPTAPVPDSVSPSAVKGQSG 791
+P+P P T +++ SG ++ T +P AP P S++PS +
Sbjct: 1447 ---LPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSAS 1503
Query: 792 TIDPSSAVA-ALNS 804
+ A A +L+S
Sbjct: 1504 ALTLGLATAPSLSS 1517
Score = 60 (26.2 bits), Expect = 3.0e-17, Sum P(7) = 3.0e-17
Identities = 34/167 (20%), Positives = 59/167 (35%)
Query: 624 SPVPVVLPAPSGTVKVEKDAMTGQSTSAS-ASLPXXXXXXXXXXXAQHVMVGIAPSSQPT 682
+P ++P P+ T+ + G + + S A P H + +AP+S
Sbjct: 1719 TPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLT-LAPASSSA 1777
Query: 683 TAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSP-- 740
+ P + + + S P + P + + LV+ +AS P P
Sbjct: 1778 SLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLVV-SASGAAPLPVT 1836
Query: 741 --GPDPKTNEQPQSESLN--PSGGESTATDGNVSSIPTAPVPDSVSP 783
P + ++P + +L P STAT P P SP
Sbjct: 1837 MVSRLPVSKDEPDTLTLRSGPPSPPSTATSFGGPRPRRQPPPPPRSP 1883
Score = 57 (25.1 bits), Expect = 5.4e-51, Sum P(5) = 5.4e-51
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 2293 EEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGG 2335
EE++E K + KE + +P +E +GP A S GG
Sbjct: 2336 EEQVEAARKDLDQAKEEVFR-LPQEEEEGPGAGDESSCGTGGG 2377
Score = 57 (25.1 bits), Expect = 7.9e-18, Sum P(7) = 7.9e-18
Identities = 23/112 (20%), Positives = 40/112 (35%)
Query: 671 VMVGIAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVL 730
V+ G + PT + P P S P + + G P
Sbjct: 1092 VLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTT 1151
Query: 731 PAASDD-IPSPGPDP-KTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDS 780
A+ +P+P P P + P ++ PSG + G ++S+ PV ++
Sbjct: 1152 ATATTTAVPAPTPAPQRLILSPDMQARLPSG--EVVSIGQLASLAQRPVANA 1201
Score = 56 (24.8 bits), Expect = 1.8e-17, Sum P(8) = 1.8e-17
Identities = 37/132 (28%), Positives = 51/132 (38%)
Query: 673 VGIAPSSQPTTAFVPVAPGSQ-SASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLP 731
V + PSS P+T P +A+ P T + G + + Q PR + + P
Sbjct: 1272 VSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVV--RQAPRDGLTPVPPLAP 1329
Query: 732 AASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSP--SAVKGQ 789
A PS G N +P +L P G T T G + P P P V P V
Sbjct: 1330 APRP--PSSGLPAVLNPRP---TLTP-GRLPTPTLGTARA-PM-PTPTLVRPLLKLVHSP 1381
Query: 790 SGTIDPSSAVAA 801
S + S+ AA
Sbjct: 1382 SPEVSASAPGAA 1393
Score = 56 (24.8 bits), Expect = 7.3e-17, Sum P(7) = 7.3e-17
Identities = 46/206 (22%), Positives = 68/206 (33%)
Query: 607 VTPPSKXXXXXXXXADKSPVPVVLPAPSGT-----VKVEKDAMTGQSTSASASLPXXXXX 661
V PS A P P + APS T V + ST A P
Sbjct: 1631 VMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPT 1690
Query: 662 XXXXXXAQHVMVGIAPSSQP-TTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPR 720
+Q + +G P T + + P S S P TP Q + G +
Sbjct: 1691 LGGSSPSQTLSLGTGNPQGPFPTQTLSLTPAS---SLVP-TPAQTLS----LAPGPPLGP 1742
Query: 721 RRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDS 780
+ + P A P P P S S + S T ++ APVP +
Sbjct: 1743 TQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQT----LTLSPAPVP-T 1797
Query: 781 VSPSAVK----GQSGTIDPSSAVAAL 802
+ P+A + + T P+S ++L
Sbjct: 1798 LGPAAAQTLALAPASTQSPASQASSL 1823
Score = 54 (24.1 bits), Expect = 9.4e-52, Sum P(4) = 9.4e-52
Identities = 26/80 (32%), Positives = 32/80 (40%)
Query: 690 PGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIP---SPGPDPKT 746
PG + P + PK R R++ G VP +K LP P SPG +
Sbjct: 3101 PGGLELTP-PVVSLTPKLRSTRLRPGSLVPPLETEK----LPRKRAGAPVGGSPGLAKRG 3155
Query: 747 NEQPQSESLNPSGG--ESTA 764
QP S L P G ES A
Sbjct: 3156 RLQPPSP-LGPEGSVEESEA 3174
Score = 52 (23.4 bits), Expect = 2.2e-19, Sum P(7) = 2.2e-19
Identities = 29/131 (22%), Positives = 51/131 (38%)
Query: 1437 GNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPINSGTECST 1496
G +P T +++ P+ TP +++ P + + + S P +P+ +
Sbjct: 1351 GRLPTPTL-GTARAPMPTPTLVR----PLLKLVHSPSPEVSASAP--GAAPLTISSPLHV 1403
Query: 1497 VSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDAIVNNLLE 1556
S + P + P S SP S P +S V S +P P+ A + +
Sbjct: 1404 PSSLPGPASSPMPI-PNS-SPLAS-PVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPIS 1460
Query: 1557 TPLDIKSIGGP 1567
PL + S GP
Sbjct: 1461 APLTV-SASGP 1470
Score = 52 (23.4 bits), Expect = 1.5e-15, Sum P(9) = 1.5e-15
Identities = 26/67 (38%), Positives = 30/67 (44%)
Query: 903 QVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQP-SGSTPAQVPSMDL 961
QV P + SA AGP PA + P+ LP QP SGS P +PS L
Sbjct: 1043 QVLPASLMVSASPAGPPLIPASRPPG------PVLLPPL-----QPNSGSLPQVLPS-PL 1090
Query: 962 GNVASDT 968
G V S T
Sbjct: 1091 G-VLSGT 1096
Score = 49 (22.3 bits), Expect = 2.9e-15, Sum P(9) = 2.9e-15
Identities = 21/71 (29%), Positives = 30/71 (42%)
Query: 738 PSPGPDPKTNEQPQSESLNPSGGE---STATDGNVSSIPTAPVPDS---VSPSAVKGQSG 791
P+PGP P+ S +P+G ++ G V P P S V PS + SG
Sbjct: 1036 PTPGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSG 1095
Query: 792 TIDPSSAVAAL 802
T P + +L
Sbjct: 1096 TSRPPTPTLSL 1106
Score = 48 (22.0 bits), Expect = 4.6e-50, Sum P(5) = 4.6e-50
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 837 TQSGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGK--QDAL 894
T G P + +++A S + ++ PE + + S GL L S + + Q+ L
Sbjct: 2610 TLEAGSIPNGQ-EQEAPDSAEGTTLTVLPEGEELPLCVSESNGLELPPSAASDEPLQEPL 2668
Query: 895 SQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSS-SQPSGSTP 953
+ +++ ++ TS+ P+ KP E +V + + P+T S+ S P G +P
Sbjct: 2669 EADRTSE-ELTEAKTPTSS----PE-KPQE----LVTAE--VAAPSTSSSATSSPEGPSP 2716
Query: 954 AQVP 957
A+ P
Sbjct: 2717 ARPP 2720
Score = 48 (22.0 bits), Expect = 9.1e-20, Sum P(7) = 9.1e-20
Identities = 20/85 (23%), Positives = 34/85 (40%)
Query: 1434 MVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSP-----I 1488
M + PG + +S +P TP++ S+ + T L+ +P +
Sbjct: 1632 MAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTL 1691
Query: 1489 NSGTECSTVSVKTDVGNHPQNVEPT 1513
+ T+S+ T GN PQ PT
Sbjct: 1692 GGSSPSQTLSLGT--GN-PQGPFPT 1713
Score = 47 (21.6 bits), Expect = 7.9e-18, Sum P(7) = 7.9e-18
Identities = 36/175 (20%), Positives = 71/175 (40%)
Query: 855 SPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVA-TSA 913
+PP++ V +L SG + ++++G A S S++ P +A TS+
Sbjct: 1477 TPPLAPVVPAAPGPPSLAP---SGASPSASALTLGLATAPSLS-SSQTPGHPLLLAPTSS 1532
Query: 914 DVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLS 973
V G + V + P+ +PA+ +S PS PA + L +S ++ + +
Sbjct: 1533 HVPGLNST-------VAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALAT 1585
Query: 974 ENSSSKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITEPYT 1028
+ ILA S + + + + A + S+ +P + + P T
Sbjct: 1586 PLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGT 1640
Score = 45 (20.9 bits), Expect = 9.3e-50, Sum P(5) = 9.3e-50
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 739 SPGPDPKTNEQPQSESLNPSGGESTATDGNVSS-IPTAPVPDSVSP 783
SP + P++ L G S+A DGN S P P ++P
Sbjct: 2932 SPVEKRRRGRPPKARDLPIPGTISSAGDGNSESRTQPPPHPSPLTP 2977
Score = 45 (20.9 bits), Expect = 9.1e-20, Sum P(7) = 9.1e-20
Identities = 27/121 (22%), Positives = 48/121 (39%)
Query: 1200 VTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGR 1259
+ PT + PG NS P + AS P + + ++ L P + A
Sbjct: 1527 LAPT-SSHVPGLNS-TVAPA-CSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQAL 1583
Query: 1260 IENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPAS 1319
+A + ++ + P+ APP +P+ + + P + +TPV AP+S
Sbjct: 1584 ATPLAPMAAPQTAI-LAPS--PAPPLAPLPVLAPSPGAA----PVLASSQTPVPVMAPSS 1636
Query: 1320 T 1320
T
Sbjct: 1637 T 1637
Score = 43 (20.2 bits), Expect = 2.3e-53, Sum P(5) = 2.3e-53
Identities = 9/51 (17%), Positives = 23/51 (45%)
Query: 890 KQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPA 940
+++ ++ + ++ ++ C D+ Q AEQ + + N+ PA
Sbjct: 2229 EEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFPA 2279
Score = 43 (20.2 bits), Expect = 2.1e-51, Sum P(5) = 2.1e-51
Identities = 30/122 (24%), Positives = 47/122 (38%)
Query: 2002 IPASLATPEEKTEGSEKDPDSSFAAQ----EDPKESVVEA---GDQMGVSLGGATVMEKS 2054
+ S + P+ K K+P S +Q + SV+E+ G + G + S
Sbjct: 2996 VTISTSPPKRKRGRPPKNPPSPRPSQLPVLDRDSTSVLESCGLGRRRQPQGQGESEGSSS 3055
Query: 2055 SEDLATPPLSLANEEEMIEGFDNDPTGISMAV---MDSKECAAEAADQMCVSEGCVVVTE 2111
ED + P LA EG +G SM V D + A + ++ V +T
Sbjct: 3056 DEDGSRPLTRLARLRLEAEGMRGRKSGGSMVVAVIQDDLDLADSGPGGLELTPPVVSLTP 3115
Query: 2112 KL 2113
KL
Sbjct: 3116 KL 3117
Score = 43 (20.2 bits), Expect = 3.5e-19, Sum P(7) = 3.5e-19
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1200 VTPTVETPPPGFNSPNENP 1218
V P VE PPP ++ + P
Sbjct: 1979 VMPPVEAPPPSLHACHPPP 1997
Score = 43 (20.2 bits), Expect = 2.0e-15, Sum P(6) = 2.0e-15
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 2311 ASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPAS 2351
+S +P+ S + VSS ++ + I VP PAS
Sbjct: 1412 SSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPAS 1452
Score = 42 (19.8 bits), Expect = 3.0e-53, Sum P(5) = 3.0e-53
Identities = 14/58 (24%), Positives = 22/58 (37%)
Query: 947 QPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEE 1004
+PS S+ P + VAS +L + I A + KA + + F E
Sbjct: 2216 EPSSSSVPSAPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNE 2273
Score = 42 (19.8 bits), Expect = 3.5e-19, Sum P(7) = 3.5e-19
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 468 TDGEPLP-PLPSRLVTDDDLKA 488
T P P P P RL+ D++A
Sbjct: 1156 TTAVPAPTPAPQRLILSPDMQA 1177
Score = 41 (19.5 bits), Expect = 3.4e-51, Sum P(5) = 3.4e-51
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1073 VPVKRHGRKTPTTGEAP-RRRGKKQGSGPSIPDGS 1106
+P KR G P G +RG+ Q P P+GS
Sbjct: 3136 LPRKRAG--APVGGSPGLAKRGRLQPPSPLGPEGS 3168
Score = 41 (19.5 bits), Expect = 1.4e-30, Sum P(4) = 1.4e-30
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 149 PFVLRRLKHKVENELPEKIERL 170
PF L L+ K + + E++ER+
Sbjct: 1883 PFYLDSLEEKRKRQRSERLERI 1904
Score = 41 (19.5 bits), Expect = 2.0e-15, Sum P(7) = 2.0e-15
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 608 TPPSKXXXXXXXXADKSPVPVVLPAPSGTVKVEKDAMTGQS 648
+P S+ + +P+PV + + K E D +T +S
Sbjct: 1815 SPASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLRS 1855
Score = 41 (19.5 bits), Expect = 4.3e-15, Sum P(8) = 4.3e-15
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 1978 ETVAEAGDQMDISIMPEKLPEHLDIPASLATP 2009
+ VA +S++P P P L+ P
Sbjct: 1261 QAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLP 1292
Score = 40 (19.1 bits), Expect = 9.3e-50, Sum P(5) = 9.3e-50
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 2315 PLDESKGPDAEVSSQTAIEGGGVVSIPVPE 2344
P D +G D SS + G +P PE
Sbjct: 2870 PADAGRGVDEAPSSTLKGKTNGADPVPGPE 2899
Score = 39 (18.8 bits), Expect = 3.8e-49, Sum P(5) = 3.8e-49
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 906 PCGVATSADVAGPDQKP 922
PC A S+ + P Q+P
Sbjct: 2808 PCEAAPSSSLPTPPQQP 2824
Score = 38 (18.4 bits), Expect = 7.6e-53, Sum P(5) = 7.6e-53
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1309 ETPVSSEAPASTEAFEQEKVTNTSSFV 1335
E P SS P++ E E+E V + + +
Sbjct: 2215 EEPSSSSVPSAPEE-EEETVASKQTHI 2240
Score = 38 (18.4 bits), Expect = 4.3e-50, Sum P(4) = 4.3e-50
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 2365 KEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSE 2402
+EP SSV +E E A + +++ A+ E
Sbjct: 2215 EEPSSSSVPSAPEEEEETVASKQTHILEQALCRAEDEE 2252
Score = 38 (18.4 bits), Expect = 4.5e-20, Sum P(5) = 4.5e-20
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 2203 PCVQMDVRGDGIVPETVPEELGLPSS 2228
P ++ G P T+ L +PSS
Sbjct: 1381 PSPEVSASAPGAAPLTISSPLHVPSS 1406
Score = 38 (18.4 bits), Expect = 1.5e-15, Sum P(9) = 1.5e-15
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 1083 PTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLR 1133
P AP+R +P G V +L +Q ++ GSK ++ +
Sbjct: 1160 PAPTPAPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVANAGGSKPLTFQ 1210
Score = 38 (18.4 bits), Expect = 7.7e-15, Sum P(6) = 7.7e-15
Identities = 9/44 (20%), Positives = 18/44 (40%)
Query: 1991 IMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESV 2034
++P P +P L +P G+ + P + + + P V
Sbjct: 1071 LLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPV 1114
Score = 38 (18.4 bits), Expect = 8.2e-15, Sum P(8) = 8.2e-15
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 1429 PDHSDMV--IGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDV 1473
P H ++ + PG T S +P TP + G S+ + A+ V
Sbjct: 1254 PAHVALIQAVAPTPGPTPV--SVLPSSTPSTTPAPTGLSLPLAANQV 1298
Score = 37 (18.1 bits), Expect = 2.3e-53, Sum P(5) = 2.3e-53
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 224 EVDTLIPKHYL 234
E DT +P+H L
Sbjct: 959 EADTFLPRHRL 969
Score = 37 (18.1 bits), Expect = 9.7e-53, Sum P(5) = 9.7e-53
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 2138 DPVNSSVTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVD-DES 2196
+P +SSV + E A Q H+L AE +E+ + + + + + +E+
Sbjct: 2216 EPSSSSVPSAPEEEEETVASKQTHILEQALCRAED-EEDIRAATQAKAEQVAELAEFNEN 2274
Query: 2197 KG 2198
G
Sbjct: 2275 DG 2276
Score = 37 (18.1 bits), Expect = 6.7e-48, Sum P(6) = 6.7e-48
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 2250 IPRGESKGPDAEANNIIDAEGGGNMRQT 2277
+P+ E +GP A + GGG R++
Sbjct: 2356 LPQEEEEGPGAGDESSCGT-GGGTHRRS 2382
Score = 37 (18.1 bits), Expect = 2.2e-19, Sum P(7) = 2.2e-19
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 2043 VSLGGATVMEKSSEDLATPPLSLANEEEMIEGFDN 2077
++LG AT SS PL LA + G ++
Sbjct: 1505 LTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNS 1539
Score = 37 (18.1 bits), Expect = 1.5e-15, Sum P(9) = 1.5e-15
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 1255 AQAGRIENIANS-SPDDKS-LPM-VPNLETAPPGFDIPIEKHNEQSRNQNNPEV 1305
A I+ +A + P S LP P+ AP G +P+ + NN V
Sbjct: 1255 AHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGV 1308
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 389 (142.0 bits), Expect = 2.9e-53, Sum P(7) = 2.9e-53
Identities = 83/171 (48%), Positives = 112/171 (65%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL+ L LL +LKA HRVL F+ MTR+LDV+E +LT+ + YLRLDG T R AL+
Sbjct: 2031 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 2090
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
++FN D F F+LS R+GGVGVNL ADTV+ +D+DWNP +D QAQ R HRIGQ RDV
Sbjct: 2091 ERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2149
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESL 412
+ R + +TVEE + A K + + +I G F T+A +++ + L
Sbjct: 2150 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNF---TTAYFKQQTIREL 2197
Score = 278 (102.9 bits), Expect = 2.9e-53, Sum P(7) = 2.9e-53
Identities = 63/198 (31%), Positives = 97/198 (48%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V +T+Y+ ++ H + W Y+I+DE IKN + L ++ S RLLLTG
Sbjct: 728 FHVCITSYKLVLQDHQA--FRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 785
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F S +F +WF+ P + S + ++ R
Sbjct: 786 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEG-------LVKR 838
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLL---MKRVEENLGSIGNSKGR 199
LH+VLRPF+LRR+K VE ++P+K E ++RC S Q+ L ++
Sbjct: 839 LHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFM 898
Query: 200 SVHNSVMELRNICNHPYL 217
SV N +M+LR +CNHP L
Sbjct: 899 SVINILMQLRKVCNHPNL 916
Score = 91 (37.1 bits), Expect = 2.2e-19, Sum P(6) = 2.2e-19
Identities = 63/274 (22%), Positives = 98/274 (35%)
Query: 675 IAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAAS 734
I+PSS P A + +AP ++ A +T + P + G P + VL A+
Sbjct: 1563 ISPSSAPAQASL-LAPAPSTSQAL-ATSLAPMAASQTTILGPS-PTPPLAPLP-VLAASQ 1618
Query: 735 DDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTID 794
+P+ P P + P S S S + ++ + PV +S S Q+ T+
Sbjct: 1619 TPLPAMTP-PSMSGAPLPSSTLVSAPTSVLAPSSTQTLVSTPVSSPLS-SLASTQTLTLA 1676
Query: 795 PSSA--VAALNSELNTNLATAXXXX-----XXXXXXXXXXMQTKGQSRKTQSGGVTPRRR 847
P+ A + L+ +L T + T Q+ GG
Sbjct: 1677 PTLAPTLGGLSPSQTHSLGTGSPQGPFPIQTLSLTPASSLVPTPAQTLSLAPGGPV---- 1732
Query: 848 GKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPC 907
G Q L P S V P L +S L + SV + LS + P
Sbjct: 1733 GPTQTLSLAPSSPVGPAPAHTLTLAPAASSASLLVPTSV---QTLTLSPAPVPVPTLDPS 1789
Query: 908 GVATSADVAGPDQKPAEQSVRVVQSNQPINLPAT 941
T A Q PA Q+ +V ++ +LP T
Sbjct: 1790 ATQTLALAPALTQAPASQASSLVSASGAASLPVT 1823
Score = 82 (33.9 bits), Expect = 6.5e-52, Sum P(8) = 6.5e-52
Identities = 37/161 (22%), Positives = 59/161 (36%)
Query: 630 LPAPSGTVKVEKDAMTGQSTSASAS--LPXXXXXXXXXXXAQ-HVMVGIAPSSQPTTAFV 686
LP TV EK+ + + A+AS +P H M G SS P++
Sbjct: 2711 LPGRLVTVVEEKELVKRRRHRATASTLVPGVSEVSASPRSPSIHSMSG-PESSPPSSGPC 2769
Query: 687 PVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKT 746
AP S ++ T + + I G G K+ + PA G PK
Sbjct: 2770 EAAPTSSLSTPTQHTFIACRHNELGITGGGSPENGEGAKLAITPPAVKR---RRGRPPKK 2826
Query: 747 NEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVK 787
N P S+ + G + + P P++V+ +A +
Sbjct: 2827 NRSPADAGRGVDEAPSSISKGKTNGVDPIPGPETVTATAAE 2867
Score = 76 (31.8 bits), Expect = 4.4e-19, Sum P(6) = 4.4e-19
Identities = 64/296 (21%), Positives = 101/296 (34%)
Query: 706 KGRGRRIQSGEQVPRRR-GKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTA 764
+GR R ++ +PR R ++I L + A P P P PK + + L P +
Sbjct: 962 EGRVSRYEADTFLPRHRLSRRILLEIATA----PDPPPRPKPVKMKVNRMLQPVPKQEGR 1017
Query: 765 TDGNVSS--IPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXXXXX 822
T V+S P PVP P T+ P V L + L + + A
Sbjct: 1018 TVVVVNSPRAPLGPVPVRPPPGPEVSTQPTLGPVPPV--LPTPLMVSASPAGTPVVPASR 1075
Query: 823 XXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDVSA--GPESKSNLQSENNSGGL 880
+ + Q V P G PP +S P + L G
Sbjct: 1076 PPGPVLLSPLQPNTGPLPQVLPSPMGVMSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSS 1135
Query: 881 RLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPA 940
L K +++ LS + V T+A V P+ P Q + ++ LP+
Sbjct: 1136 SLLKPLTVPPGYTLSPVAATTTSSTIATVTTTA-VPAPNSTP--QRL-ILSPEMQARLPS 1191
Query: 941 THDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVER 996
S S AQ P G T ++ + G + LA+ + ++R
Sbjct: 1192 GEVVSIGQLASL-AQRPVTSAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQR 1246
Score = 71 (30.1 bits), Expect = 2.9e-53, Sum P(7) = 2.9e-53
Identities = 33/137 (24%), Positives = 53/137 (38%)
Query: 839 SGGVTPRR-RGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQE 897
+GG +P G + A+ P + P K+ ++ G S+S GK
Sbjct: 2796 TGGGSPENGEGAKLAITPPAVKRRRGRPPKKNRSPADAGRGVDEAPSSISKGK------- 2848
Query: 898 LSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINL-PATHDSSSQPSGST---- 952
+N + P +A A PD KP + + V +PI L P +P +
Sbjct: 2849 -TNGVDPIPGPETVTATAAEPDLKPQPLAPQPVHKPEPIILSPVEKRRRGRPPKARDLPI 2907
Query: 953 PAQVPSMDLGNVASDTK 969
P + S GN+ S T+
Sbjct: 2908 PGTISSPGDGNLESRTQ 2924
Score = 64 (27.6 bits), Expect = 2.9e-53, Sum P(7) = 2.9e-53
Identities = 30/103 (29%), Positives = 40/103 (38%)
Query: 677 PSSQPTTAFVPV-APGSQSASACPSTPMQPKGRGRRI---QSGEQVPRRRGKKIGLVL-P 731
P + T+A V + GS P + K GR + + E V RRR + L P
Sbjct: 2680 PPRRRTSADVEIRGQGSGRTGQPPGPKVLRKLPGRLVTVVEEKELVKRRRHRATASTLVP 2739
Query: 732 AASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPT 774
S+ SP P + ES PS G A + S PT
Sbjct: 2740 GVSEVSASPR-SPSIHSMSGPESSPPSSGPCEAAPTSSLSTPT 2781
Score = 60 (26.2 bits), Expect = 1.7e-18, Sum P(6) = 1.7e-18
Identities = 32/156 (20%), Positives = 53/156 (33%)
Query: 625 PVPVVLPA-PSGTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQPTT 683
P P+++ A P+GT V G S P VM G + PT
Sbjct: 1056 PTPLMVSASPAGTPVVPASRPPGP-VLLSPLQPNTGPLPQVLPSPMGVMSGTSRPPTPTL 1114
Query: 684 AFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQV-PRRRGKKIGLVLPAASDDIPSPGP 742
+ P P S P + + G + P + + +P+P
Sbjct: 1115 SLKPAPPAPVRLSPAPPPGSSSLLKPLTVPPGYTLSPVAATTTSSTIATVTTTAVPAPNS 1174
Query: 743 DP-KTNEQPQSESLNPSGGESTATDGNVSSIPTAPV 777
P + P+ ++ PSG + G ++S+ PV
Sbjct: 1175 TPQRLILSPEMQARLPSG--EVVSIGQLASLAQRPV 1208
Score = 58 (25.5 bits), Expect = 2.9e-53, Sum P(7) = 2.9e-53
Identities = 21/87 (24%), Positives = 31/87 (35%)
Query: 1200 VTPTVETPPPGFNSPNENPGELTGTKNDASV--RGDHTPVSGHTLASKTEALKPENKAQA 1257
+TP V + P F S PG L + + PV +A + P
Sbjct: 3059 LTPPVVSLTPKFRSTRLRPGSLVPPLETEKMPRKRSGAPVGSSGMAKRGRLQPPSPLGPE 3118
Query: 1258 GRIENI-ANSSPDDKSLPMVPNLETAP 1283
G +E A +S D++ P T P
Sbjct: 3119 GSVEESEAEASGDEEEGDGTPRRRTGP 3145
Score = 56 (24.8 bits), Expect = 6.7e-51, Sum P(5) = 6.7e-51
Identities = 41/185 (22%), Positives = 76/185 (41%)
Query: 1752 EIFNMEGGPSNALLSSSKDIIAESAKADVVLDE-HGKVQLLPGADNPEGGVIVPEHKSEN 1810
E+F+M P SS + E + V + H Q L A++ E + K+E
Sbjct: 2196 ELFDM---PLEEPPGSSVSSVPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQ 2252
Query: 1811 MGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHM 1870
+ E + + F + ++AS G DE + + ++ +V++L M
Sbjct: 2253 VAELAEFNENEGFPAGE--GEEASRPGPGAE-DEEM--SRAEQEIAALVEQLTPIERYAM 2307
Query: 1871 GVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDC 1930
+ + V RE+ ++ + +A K+ +D + K+ L E+ GD+M C
Sbjct: 2308 KFLEASLEEVSREELKQAE-EQVEAARKD--LDQA--KEEVFRLPQEEEEGPGAGDEMSC 2362
Query: 1931 CQSGV 1935
SGV
Sbjct: 2363 ATSGV 2367
Score = 55 (24.4 bits), Expect = 4.4e-19, Sum P(6) = 4.4e-19
Identities = 26/111 (23%), Positives = 42/111 (37%)
Query: 1480 TPILSGSPINSGTECSTVSVKTDVGNHPQNVEPTSA--SPERSGPQNSAVGFCDKSEIPS 1537
TP L+ SG ++ V V + T A P+ SG +S + S +P
Sbjct: 1481 TPALAVVSAASGPPLASAGVSPSVSALALGLATTPALSPPQTSG--HSLLLATTSSHVPG 1538
Query: 1538 MEAEVAKCPSDAIVN-NLLETPLDIKSIGGPIVSMKAADVADADHPLETAV 1587
+ + VA S +V + L +P I P + A L T++
Sbjct: 1539 LNSAVAPACSPVLVPASALTSPFPISPSSAPAQASLLAPAPSTSQALATSL 1589
Score = 54 (24.1 bits), Expect = 1.5e-52, Sum P(7) = 1.5e-52
Identities = 47/209 (22%), Positives = 73/209 (34%)
Query: 671 VMVGIAPSSQPTTAFVPVAPGSQSASACPS-----TPMQPKGRGRRI-QSGEQVPRRRGK 724
V V + P S+ +P + A + P P +G R + G ++ +
Sbjct: 2551 VAVDVLPESEKNLPLIPAPSSTLEAESIPDDQEQEVPGSVEGTNRTLLPGGGELTVSLSE 2610
Query: 725 KIGLVLP--AASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVS 782
GL LP AASD+ P + N + E P + V + TAP S S
Sbjct: 2611 SNGLELPPSAASDE-PLQLLETHRNLEDTREVQTPVSNSEKPQE-LVRAEVTAP---STS 2665
Query: 783 PSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQS-RKTQSGG 841
SA G + P+ S + + + G+ +
Sbjct: 2666 SSATSSPEGPL-PARPPRRRTSA-DVEIRGQGSGRTGQPPGPKVLRKLPGRLVTVVEEKE 2723
Query: 842 VTPRRRGKRQALGSPP-ISDVSAGPESKS 869
+ RRR + A P +S+VSA P S S
Sbjct: 2724 LVKRRRHRATASTLVPGVSEVSASPRSPS 2752
Score = 54 (24.1 bits), Expect = 7.9e-51, Sum P(4) = 7.9e-51
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 2365 KEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLV--IAEDKTENEI 2422
+EP GSSVS + +E E A + +++ A+ E + + +AE NE
Sbjct: 2203 EEPPGSSVSSVPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNEN 2262
Query: 2423 EEDP 2426
E P
Sbjct: 2263 EGFP 2266
Score = 53 (23.7 bits), Expect = 1.2e-50, Sum P(6) = 1.2e-50
Identities = 19/95 (20%), Positives = 40/95 (42%)
Query: 1989 ISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGA 2048
+ ++PE IPA +T E ++ +++ + + E +++ G ++ VSL +
Sbjct: 2553 VDVLPESEKNLPLIPAPSSTLEAESIPDDQEQEVP-GSVEGTNRTLLPGGGELTVSLSES 2611
Query: 2049 TVMEKSSEDLATPPLSLANEEEMIEGFDNDPTGIS 2083
+E + PL L +E T +S
Sbjct: 2612 NGLELPPSAASDEPLQLLETHRNLEDTREVQTPVS 2646
Score = 53 (23.7 bits), Expect = 4.7e-49, Sum P(5) = 4.7e-49
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 699 PSTPMQPKGRGRRIQSG--------EQVPRRR-GKKIGLVLPAASDDI--PSP-GPDPKT 746
P + PK R R++ G E++PR+R G +G A + PSP GP+
Sbjct: 3062 PVVSLTPKFRSTRLRPGSLVPPLETEKMPRKRSGAPVGSSGMAKRGRLQPPSPLGPEGSV 3121
Query: 747 NEQPQSESLNPSGGEST 763
E S + G+ T
Sbjct: 3122 EESEAEASGDEEEGDGT 3138
Score = 53 (23.7 bits), Expect = 1.2e-15, Sum P(6) = 1.2e-15
Identities = 84/359 (23%), Positives = 124/359 (34%)
Query: 676 APSSQPTTAFVPVAPGSQS--ASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVL-PA 732
AP + P TA +PV+ + P+ + G + S P +GL PA
Sbjct: 1457 APLTIPITAPLPVSDLGPALLTGVTPALAVVSAASGPPLASAGVSPSVSALALGLATTPA 1516
Query: 733 ASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGT 792
S S LN + + + +S T+P P +SPS+ Q+
Sbjct: 1517 LSPPQTSGHSLLLATTSSHVPGLNSAVAPACSPVLVPASALTSPFP--ISPSSAPAQASL 1574
Query: 793 IDPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQA 852
+ P+ + + L T+LA G S T P +
Sbjct: 1575 LAPAPSTS---QALATSLAPMAASQTTIL----------GPS-PTPPLAPLPVLAASQTP 1620
Query: 853 LGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVA-T 911
L + +S P S L S S L S + ++ +S LS+ Q +A T
Sbjct: 1621 LPAMTPPSMSGAPLPSSTLVSAPTSV-LAPSSTQTL-VSTPVSSPLSSLASTQTLTLAPT 1678
Query: 912 SADVAGPDQKPAEQSVRVVQSNQ---PIN-LPATHDSSSQPSGSTPAQVPSMDLGNVASD 967
A G P++ S Q PI L T SS P TPAQ S+ G
Sbjct: 1679 LAPTLG-GLSPSQTHSLGTGSPQGPFPIQTLSLTPASSLVP---TPAQTLSLAPGGPVGP 1734
Query: 968 TKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALD-SITE 1025
T + LS SS G P L+ A ++ S + +P LD S T+
Sbjct: 1735 T-QTLSLAPSSPVGPAPAHTLTLAPAASSASLLVPTSVQTLTLSPAPVPVPTLDPSATQ 1792
Score = 52 (23.4 bits), Expect = 6.7e-51, Sum P(5) = 6.7e-51
Identities = 36/163 (22%), Positives = 63/163 (38%)
Query: 2250 IPRGESKGPDAEANNIIDAEGGGNMRQT----VPQDLGLPLSSS-DVEEEKIEGFSK-PV 2303
+P+ E +GP A + + A G + R++ P+ LG +S + +G + PV
Sbjct: 2346 LPQEEEEGPGA-GDEMSCATSGVSHRRSKKVKAPERLGTRVSERLRGARAETQGANHTPV 2404
Query: 2304 GSEKESIASAVP-----LDES---KGPDAEVSSQTAIE-GGGVVSIPVPEEADGPASFLA 2354
S ++ + VP + E P A V+S A + + P+P A P + L
Sbjct: 2405 TSSHQTCNTFVPPRCSPVRERIPRPRPAASVASAPASAITSSLATAPIPISAPNPVTILP 2464
Query: 2355 AEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVAL 2397
P+ + S + S P P+ + G L
Sbjct: 2465 VHISCTPLPTCTPLPAQTSLLTSSSPAPLDSLPVPISPGVTNL 2507
Score = 51 (23.0 bits), Expect = 8.4e-51, Sum P(5) = 8.4e-51
Identities = 34/134 (25%), Positives = 55/134 (41%)
Query: 2247 ASSIPRG-ESKGPDA-EANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVG 2304
A SIP E + P + E N GGG + ++ + GL L S +E ++
Sbjct: 2575 AESIPDDQEQEVPGSVEGTNRTLLPGGGELTVSLSESNGLELPPSAASDEPLQLLETHRN 2634
Query: 2305 SEKESIASAVPLDESKGPDAEVSSQ-TAIE-GGGVVSIPV-PEEADGPASFLAAEEE-KN 2360
E ++ P+ S+ P V ++ TA S P P A P +A+ E +
Sbjct: 2635 LE-DTREVQTPVSNSEKPQELVRAEVTAPSTSSSATSSPEGPLPARPPRRRTSADVEIRG 2693
Query: 2361 ECSDK--EPVGSSV 2372
+ S + +P G V
Sbjct: 2694 QGSGRTGQPPGPKV 2707
Score = 51 (23.0 bits), Expect = 1.3e-17, Sum P(5) = 1.3e-17
Identities = 41/210 (19%), Positives = 71/210 (33%)
Query: 2213 GIVPETVPEELGLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDAEGGG 2272
G+ P LGL ++P + ++S +P S A + ++ A
Sbjct: 1499 GVSPSVSALALGLATTPALSPPQTSGHSLLLATTSSHVPGLNSAVAPACSPVLVPASALT 1558
Query: 2273 N----MRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSS 2328
+ + P L L+ + + + P+ + + +I P +S
Sbjct: 1559 SPFPISPSSAPAQASL-LAPAPSTSQALATSLAPMAASQTTILGPSPTPPLAPLPVLAAS 1617
Query: 2329 QT---AIEGGGVVSIPVPEEA--DGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAK 2383
QT A+ + P+P P S LA + S PV S +S + S +
Sbjct: 1618 QTPLPAMTPPSMSGAPLPSSTLVSAPTSVLAPSSTQTLVST--PVSSPLSSLASTQTLTL 1675
Query: 2384 AFEPMDVVDGAVALENTSEGMGGPSPPLVI 2413
A + G + S G G P P I
Sbjct: 1676 APTLAPTLGGLSPSQTHSLGTGSPQGPFPI 1705
Score = 50 (22.7 bits), Expect = 1.6e-52, Sum P(8) = 1.6e-52
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1073 VPVKRHGRKTPTTGEAPRRRGKKQGSGPSIPDGS 1106
+P KR G ++G A +RG+ Q P P+GS
Sbjct: 3089 MPRKRSGAPVGSSGMA--KRGRLQPPSPLGPEGS 3120
Score = 50 (22.7 bits), Expect = 8.0e-50, Sum P(6) = 8.0e-50
Identities = 13/65 (20%), Positives = 30/65 (46%)
Query: 885 SVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATH-D 943
SV +++ ++ + ++ ++ C D+ Q AEQ + + N+ PA +
Sbjct: 2212 SVPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENEGFPAGEGE 2271
Query: 944 SSSQP 948
+S+P
Sbjct: 2272 EASRP 2276
Score = 49 (22.3 bits), Expect = 1.0e-49, Sum P(6) = 1.0e-49
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 947 QPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEE 1004
+P GS+ + VP + VAS +L + I A + KA + + F E
Sbjct: 2204 EPPGSSVSSVPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNE 2261
Score = 48 (22.0 bits), Expect = 1.6e-52, Sum P(8) = 1.6e-52
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 1947 PSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIP 2003
P S+ EA+ G E+ + + G + V +Q D I+ P HL IP
Sbjct: 3117 PEGSVEESEAEASGDEEEGDGTPRR-RTGPRRLVGTT-NQGDQRILRSSAPPHLSIP 3171
Score = 47 (21.6 bits), Expect = 6.5e-52, Sum P(8) = 6.5e-52
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 915 VAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTP 953
V PD +S + QP+ + SSS GS P
Sbjct: 2977 VLDPDSSSVLESCGLGVQRQPLGQAESEGSSSDEDGSRP 3015
Score = 47 (21.6 bits), Expect = 1.2e-50, Sum P(6) = 1.2e-50
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 2315 PLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPAS 2351
P D +G D SS + + GV IP PE A+
Sbjct: 2830 PADAGRGVDEAPSSISKGKTNGVDPIPGPETVTATAA 2866
Score = 46 (21.3 bits), Expect = 2.8e-48, Sum P(8) = 2.8e-48
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVP 778
I SP + P++ L G S+ DGN+ S T P+P
Sbjct: 2887 ILSPVEKRRRGRPPKARDLPIPGTISSPGDGNLES-RTQPLP 2927
Score = 46 (21.3 bits), Expect = 1.6e-16, Sum P(7) = 1.6e-16
Identities = 38/150 (25%), Positives = 60/150 (40%)
Query: 625 PVPVVLPAP----SGTVKVEKDAMTGQ-STSASASL-PXXXXXXXXXXXAQHVMVG--IA 676
P+P VLP+P SGT + ++ + + A L P V G ++
Sbjct: 1091 PLPQVLPSPMGVMSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSSLLKPLTVPPGYTLS 1150
Query: 677 PSSQPTTAFVPVAPGSQSASACP-STP----MQPKGRGRRIQSGEQVPRRRGKKIGLVLP 731
P + TT+ +A + +A P STP + P+ + R + SGE V IG +
Sbjct: 1151 PVAATTTSST-IATVTTTAVPAPNSTPQRLILSPEMQAR-LPSGEVV------SIGQLAS 1202
Query: 732 AASDDIPSPGPDPKTNEQPQSESLNPSGGE 761
A + S G Q Q L +G +
Sbjct: 1203 LAQRPVTSAGGSKPLTFQIQGNKLTLTGAQ 1232
Score = 45 (20.9 bits), Expect = 6.2e-52, Sum P(7) = 6.2e-52
Identities = 19/75 (25%), Positives = 30/75 (40%)
Query: 2209 VRGDGIVPETVPEELGLPSSPMVVXXXXXXXXXXXXPSASSIPRGESKGPDAEANNIIDA 2268
+R +VP E++ S V P + P G + +AEA+ +
Sbjct: 3075 LRPGSLVPPLETEKMPRKRSGAPVGSSGMAKRGRLQPPSPLGPEGSVEESEAEASGD-EE 3133
Query: 2269 EGGGN-MRQTVPQDL 2282
EG G R+T P+ L
Sbjct: 3134 EGDGTPRRRTGPRRL 3148
Score = 45 (20.9 bits), Expect = 4.2e-18, Sum P(6) = 4.2e-18
Identities = 41/167 (24%), Positives = 59/167 (35%)
Query: 1481 PILSGSPINSGTECST-VSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSME 1539
P L+ S + S T +T + T P S SPE SG A K + M
Sbjct: 1358 PTLTPSRLTSPTLGTTRTPIPTPTLVRPLLKLVHSPSPEVSGEFIMAKNLPRKVKPCVMG 1417
Query: 1540 AEVAKCPSDAIVNNLLETPLDIKSIGGPIVSMKAADVADADHPLETAVELGSPVNSCTVE 1599
+ A S+A L+E +S +S+ A PL + PV+ +
Sbjct: 1418 LKAAWKISEAY--GLVERMGQDRSSRSRKISVPTTLPVPASAPLTIPITAPLPVSD--LG 1473
Query: 1600 PXXXXXXXXXXXXXXXXLDNPLSIEGIGLSVSAKTDDVADHP-VEPP 1645
P PL+ G+ SVSA +A P + PP
Sbjct: 1474 PALLTGVTPALAVVSAASGPPLASAGVSPSVSALALGLATTPALSPP 1520
Score = 43 (20.2 bits), Expect = 5.6e-50, Sum P(5) = 5.6e-50
Identities = 17/64 (26%), Positives = 26/64 (40%)
Query: 2339 SIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALE 2398
SIP +E + P S + V S S P A + EP+ +++ LE
Sbjct: 2577 SIPDDQEQEVPGSVEGTNRTLLPGGGELTVSLSESNGLELPPSAASDEPLQLLETHRNLE 2636
Query: 2399 NTSE 2402
+T E
Sbjct: 2637 DTRE 2640
Score = 43 (20.2 bits), Expect = 4.1e-49, Sum P(6) = 4.1e-49
Identities = 77/323 (23%), Positives = 122/323 (37%)
Query: 1209 PGFNSPNENPGEL-TGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSS 1267
PG + + GE+ T+ A V P ++ AS +L P N ++ + S
Sbjct: 2502 PGVTNLLLDSGEVEVCTQELAPVESLELPGMTNSEASLV-SLVPPNDLLPVAVDVLPES- 2559
Query: 1268 PDDKSLPMVPNLETAPPGFDIPIEKHNE-----QSRNQNNPEVKGEETPVSSEA-----P 1317
+K+LP++P + IP ++ E + N+ GE T SE+ P
Sbjct: 2560 --EKNLPLIPAPSSTLEAESIPDDQEQEVPGSVEGTNRTLLPGGGELTVSLSESNGLELP 2617
Query: 1318 ASTEAFEQEKVTNTSSFVNLAD-------LSSDDKTCSVTPAMETAPGFDIPIEKGVEQS 1370
S + E ++ T NL D +S+ +K + A TAP E
Sbjct: 2618 PSAASDEPLQLLETHR--NLEDTREVQTPVSNSEKPQELVRAEVTAPSTSSSATSSPE-- 2673
Query: 1371 GTEIDAKVKWKNTPLPGEAIVAGI-EVFKPEN-KTDGDSVEKLEDTVDDHSLVKELIHRS 1428
G + A+ + T E G +P K +L V++ LVK HR+
Sbjct: 2674 GP-LPARPPRRRTSADVEIRGQGSGRTGQPPGPKVLRKLPGRLVTVVEEKELVKRRRHRA 2732
Query: 1429 PDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPI 1488
S +V PG SE S+ P +P I S GP S + + + T LS
Sbjct: 2733 TA-STLV----PG-VSEVSAS-P-RSPSI-HSMSGPESSPPSSGPCE-AAPTSSLSTPTQ 2782
Query: 1489 NSGTECSTVSVKTDVGNHPQNVE 1511
++ C + G P+N E
Sbjct: 2783 HTFIACRHNELGITGGGSPENGE 2805
Score = 43 (20.2 bits), Expect = 2.2e-19, Sum P(6) = 2.2e-19
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1200 VTPTVETPPPGFNSPNENP 1218
V P VE PPP ++ + P
Sbjct: 1966 VMPPVEAPPPSLHACHPPP 1984
Score = 42 (19.8 bits), Expect = 8.3e-18, Sum P(6) = 8.3e-18
Identities = 32/156 (20%), Positives = 54/156 (34%)
Query: 1203 TVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIEN 1262
T + PG NS P + AS P+S + ++ L P +
Sbjct: 1531 TTSSHVPGLNSAVA-PA-CSPVLVPASALTSPFPISPSSAPAQASLLAPAPSTSQALATS 1588
Query: 1263 IANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRN-QNNPEVKGEETPVSSEAPASTE 1321
+A + ++ + P+ PP +P+ ++ P + G P S+ A T
Sbjct: 1589 LAPMAASQTTI-LGPS--PTPPLAPLPVLAASQTPLPAMTPPSMSGAPLPSSTLVSAPTS 1645
Query: 1322 AFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAP 1357
S + LSS T ++T A AP
Sbjct: 1646 VLAPSSTQTLVSTPVSSPLSSLASTQTLTLAPTLAP 1681
Score = 42 (19.8 bits), Expect = 1.0e-16, Sum P(7) = 1.0e-16
Identities = 14/62 (22%), Positives = 24/62 (38%)
Query: 1947 PSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASL 2006
P+SSL P A+ + PV L + + +++ P L +P S+
Sbjct: 1712 PASSLVPTPAQTLSLAPGGPVGPTQTLSLAPSSPVGPAPAHTLTLAPAASSASLLVPTSV 1771
Query: 2007 AT 2008
T
Sbjct: 1772 QT 1773
Score = 41 (19.5 bits), Expect = 1.2e-29, Sum P(7) = 1.2e-29
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 149 PFVLRRLKHKVENELPEKIERL 170
PF L L+ K + + E++ER+
Sbjct: 1870 PFYLDSLEEKRKQQRSERLERI 1891
Score = 40 (19.1 bits), Expect = 4.0e-51, Sum P(7) = 4.0e-51
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 757 PSGGESTATDGNV-SSIPTAPVPDSVSPSAV 786
P+ ++A + SS+ TAP+P S +P+ V
Sbjct: 2431 PAASVASAPASAITSSLATAPIPIS-APNPV 2460
Score = 39 (18.8 bits), Expect = 1.9e-48, Sum P(5) = 1.9e-48
Identities = 14/62 (22%), Positives = 28/62 (45%)
Query: 2138 DPVNSSVTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVD-DES 2196
+P SSV+ + E A Q H+L AE +E+ + + + + + +E+
Sbjct: 2204 EPPGSSVSSVPEEEEETVASKQTHILEQALCRAED-EEDIRAATQAKAEQVAELAEFNEN 2262
Query: 2197 KG 2198
+G
Sbjct: 2263 EG 2264
Score = 38 (18.4 bits), Expect = 1.0e-16, Sum P(7) = 1.0e-16
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSM 959
P +P+ + V + +P P+ S + + TP P++
Sbjct: 1341 PAPRPSSSGLPAVLTPRPTLTPSRLTSPTLGTTRTPIPTPTL 1382
Score = 38 (18.4 bits), Expect = 9.4e-16, Sum P(7) = 9.4e-16
Identities = 36/150 (24%), Positives = 56/150 (37%)
Query: 622 DKSPVPVVLPAPSGTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIA---PS 678
D S + AP+ T A + S S +ASLP + + + PS
Sbjct: 1787 DPSATQTLALAPALTQAPASQASSLVSASGAASLPVTMVNRLPVPKDEPETLTLRSGPPS 1846
Query: 679 SQPT-TAFVPVAPGSQSASACPSTP--MQPKGRGRRIQSGEQVPR--RRGKKIGLVLPAA 733
PT T+F P Q P +P + R+ Q E++ R + + G + P
Sbjct: 1847 PLPTATSFSGPRPRRQPPPP-PRSPFYLDSLEEKRKQQRSERLERIFQLSEAHGALAPVY 1905
Query: 734 SDDIPSPGPDPKTNEQPQSESLNP-SGGES 762
++ D T QP + + P S G S
Sbjct: 1906 GTEVL----DFCTLPQPVASPIGPRSPGPS 1931
Score = 37 (18.1 bits), Expect = 2.9e-53, Sum P(7) = 2.9e-53
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 224 EVDTLIPKHYL 234
E DT +P+H L
Sbjct: 969 EADTFLPRHRL 979
Score = 37 (18.1 bits), Expect = 2.9e-53, Sum P(7) = 2.9e-53
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 629 VLPAPSGTVKVE 640
++PAPS T++ E
Sbjct: 2565 LIPAPSSTLEAE 2576
Score = 37 (18.1 bits), Expect = 3.3e-51, Sum P(8) = 3.3e-51
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 1366 GVEQSGTEIDAKVKWKNTPL-PGEAIVAGIEVFKPENKTDGDSV 1408
G+E + + K+++T L PG ++V +E K K G V
Sbjct: 3056 GLELTPPVVSLTPKFRSTRLRPG-SLVPPLETEKMPRKRSGAPV 3098
Score = 37 (18.1 bits), Expect = 1.7e-48, Sum P(6) = 1.7e-48
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 1760 PSNALLSSSKDIIAESAK 1777
P N LL + D++ ES K
Sbjct: 2544 PPNDLLPVAVDVLPESEK 2561
Score = 37 (18.1 bits), Expect = 1.7e-48, Sum P(6) = 1.7e-48
Identities = 22/85 (25%), Positives = 35/85 (41%)
Query: 853 LGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQD--ALSQ-------ELS--NK 901
L PP S VS+ PE + + + L + + ++D A +Q EL+ N+
Sbjct: 2202 LEEPPGSSVSSVPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNE 2261
Query: 902 IQVQPCGVATSADVAGPDQKPAEQS 926
+ P G A GP + E S
Sbjct: 2262 NEGFPAGEGEEASRPGPGAEDEEMS 2286
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 379 (138.5 bits), Expect = 3.1e-53, Sum P(5) = 3.1e-53
Identities = 76/156 (48%), Positives = 98/156 (62%)
Query: 241 CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL 300
CGKL+ L LL +LK HR L F+ MT++LD+ E +L Y YLRLDG T R L
Sbjct: 1378 CGKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNLHAYTYLRLDGSTKIDKRQVL 1437
Query: 301 IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
++FN D F+F+LS R+GG+G+NL ADTVI +DTDWNP +D QAQ R HRIGQ R+
Sbjct: 1438 TERFNT-DPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWNPSMDAQAQDRCHRIGQTRE 1496
Query: 361 VLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFF 396
V + RF T T+EE + + K + I AG F
Sbjct: 1497 VNIYRFITQHTIEENILKKSNQKRQLDKMVIKAGEF 1532
Score = 287 (106.1 bits), Expect = 3.1e-53, Sum P(5) = 3.1e-53
Identities = 71/201 (35%), Positives = 100/201 (49%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V +T+Y +M+ H + K W Y+I+DE H IKN + ++ H+ + RLLLTG
Sbjct: 881 FHVCITSYSMVMSDHLIFRRKK--WVYMILDEAHVIKNFKTQRWQNMLHFNTERRLLLTG 938
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP IF S +F WF+ P + D IINR
Sbjct: 939 TPLQNNLMELWSLMHFLMPDIFQSHREFQDWFSNPVTGMIEGGDDVNED-------IINR 991
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSIGN-SKGR-- 199
LH VLRPF+LRRLK VE ++P K +V C S QK L + + + S G
Sbjct: 992 LHAVLRPFLLRRLKKDVEKQMPPKHTHIVPCSMSRRQKFLYEEFINSSSTQSTLSSGSFF 1051
Query: 200 SVHNSVMELRNICNHPYLSQL 220
S+ N +M+LR +CNHP L ++
Sbjct: 1052 SIINILMQLRKVCNHPDLFEI 1072
Score = 66 (28.3 bits), Expect = 3.1e-53, Sum P(5) = 3.1e-53
Identities = 35/130 (26%), Positives = 52/130 (40%)
Query: 1201 TPTVETPPPG-FNSPNE----NPGELTGTKNDAS-----VRGDHTPVSGHTLASKTEALK 1250
TPT TPPP N+ N P +T T A+ V PVS + T +K
Sbjct: 2931 TPTNITPPPQPLNANNTVTTVTPTPITTTTTTAATTPTTVSPPIKPVSKRSKKEPTVKVK 2990
Query: 1251 PENKAQAGRIENIAN---SSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKG 1307
+K +A A S P+ S P + A +++ +Q +NQN P+
Sbjct: 2991 KISKKEAAAQAQAAAQAASLPNQSSQPSIHAQIQA--SLQQQLQQQQQQQQNQNQPQ--- 3045
Query: 1308 EETPVSSEAP 1317
+ TP + P
Sbjct: 3046 QTTPKLAAQP 3055
Score = 59 (25.8 bits), Expect = 3.1e-53, Sum P(5) = 3.1e-53
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 929 VVQSNQPINLPAT-HDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIP 984
V+ ++ N+ + + SS PS S + S+ N D K+ S +SSSK ++P
Sbjct: 2162 VINNSNSGNVTVSGYSGSSTPSSSLSSSTSSISTSN--KDKKKSSSSSSSSKKRLVP 2216
Score = 59 (25.8 bits), Expect = 1.3e-50, Sum P(6) = 1.3e-50
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 1880 VEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPE 1939
+E+ K EE + +++KI K +S+ L +S ++ ++ SG V
Sbjct: 2124 IEKAKQEE---ERRAKEKRDQKIHS---KKSNSSSSTLSNSNNNV---INNSNSGNVTVS 2174
Query: 1940 NLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKE 1978
S PSSSL+ + I +S KD S S SK+
Sbjct: 2175 GYSGSSTPSSSLSSSTSSIS-TSNKDKKKSSSSSSSSKK 2212
Score = 56 (24.8 bits), Expect = 6.4e-53, Sum P(5) = 6.4e-53
Identities = 41/197 (20%), Positives = 66/197 (33%)
Query: 790 SGTIDPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGK 849
S T+ S+ NS + + S K + + K
Sbjct: 2152 SSTLSNSNNNVINNSNSGNVTVSGYSGSSTPSSSLSSSTSSISTSNKDKKKSSSSSSSSK 2211
Query: 850 RQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGV 909
++ + I KS+ + E+ +G L S VS KQ + +N +
Sbjct: 2212 KRLVPDDIIVTGGVANSDKSDAELEDFAGSLEESL-VS--KQGGVPSTTTNSSTSRKKSE 2268
Query: 910 ATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSG---STPAQVPSMDLGNVAS 966
D + D+ +S +N IN P + SSS SG Q S G V
Sbjct: 2269 YDLFDASSQDEGSTNESGSTTNNNN-INNPTSTSSSSSSSGRKRDRKKQRLSKSNGGVGG 2327
Query: 967 DTKEVLSE-NSSSKGGV 982
++ S +SSS G+
Sbjct: 2328 GGSDLESPISSSSISGI 2344
Score = 56 (24.8 bits), Expect = 1.3e-51, Sum P(4) = 1.3e-51
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 734 SDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPT--APVPDSVSP 783
+++I + P TN P + LN + +T T +++ T A P +VSP
Sbjct: 2921 NNNINNNNPSTPTNITPPPQPLNANNTVTTVTPTPITTTTTTAATTPTTVSP 2972
Score = 55 (24.4 bits), Expect = 1.6e-51, Sum P(6) = 1.6e-51
Identities = 28/143 (19%), Positives = 63/143 (44%)
Query: 669 QHVMVGIAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRR-RGKKIG 727
QH + + P S P +F A S S +Q + + + S + + + +K+
Sbjct: 2058 QHYLY-LYPPSPPLISFEAFA--KPSLSKLKRGKIQKQVAQQYVYSKQHTKEKEKERKLL 2114
Query: 728 LVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSA-V 786
+ + D I + + + + + S +S ++ +S+ + +S S + V
Sbjct: 2115 MKMKKEKDKIEKAKQEEERRAKEKRDQKIHSK-KSNSSSSTLSNSNNNVINNSNSGNVTV 2173
Query: 787 KGQSGTIDPSSAVAALNSELNTN 809
G SG+ PSS++++ S ++T+
Sbjct: 2174 SGYSGSSTPSSSLSSSTSSISTS 2196
Score = 53 (23.7 bits), Expect = 1.3e-50, Sum P(6) = 1.3e-50
Identities = 20/86 (23%), Positives = 33/86 (38%)
Query: 1247 EALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKH--NEQSRNQNNPE 1304
E LK K + EN N + ++K E +I IEK NE+ + N +
Sbjct: 1736 ENLKENEKEKENENEN-ENENENEKEKDNEKEREKQEKENEIEIEKEKGNEKENEKENEK 1794
Query: 1305 VKGEETPVSSEAPASTEAFEQEKVTN 1330
K E + + ++ K+ N
Sbjct: 1795 EKENERDKDKDKDQDQDKDQEMKIIN 1820
Score = 52 (23.4 bits), Expect = 1.6e-52, Sum P(5) = 1.6e-52
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 744 PKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQS---GTIDPSSAVA 800
P +N QP + + N + + + N ++ T +P ++ P ++ G + I+ ++ +
Sbjct: 2828 PNSN-QPMAINNNTNNNNNLNNNNNNNNTNTINMPMNIQPPSIIGMNINNNNINNNNNIN 2886
Query: 801 ALNSELNTN 809
N+ +N N
Sbjct: 2887 NNNNNINNN 2895
Score = 50 (22.7 bits), Expect = 6.7e-50, Sum P(6) = 6.7e-50
Identities = 24/123 (19%), Positives = 46/123 (37%)
Query: 1212 NSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDK 1271
N+ N N N+ + ++ ++ + ++ T P A +P
Sbjct: 2899 NNNNNNNNNNNNNNNNNNNNNNNNNINNNNPSTPTNITPPPQPLNANNTVTTVTPTPITT 2958
Query: 1272 SLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQE-KVTN 1330
+ T P PI+ +++S+ + P VK ++ EA A +A Q + N
Sbjct: 2959 T---TTTAATTPTTVSPPIKPVSKRSKKE--PTVKVKKIS-KKEAAAQAQAAAQAASLPN 3012
Query: 1331 TSS 1333
SS
Sbjct: 3013 QSS 3015
Score = 49 (22.3 bits), Expect = 3.3e-50, Sum P(6) = 3.3e-50
Identities = 10/45 (22%), Positives = 23/45 (51%)
Query: 1291 EKHNEQSRNQNNPEV--KGEETPVSSEAPASTEAFEQEKVTNTSS 1333
EK NE+ ++++ + K +E + +E P + E + N ++
Sbjct: 1795 EKENERDKDKDKDQDQDKDQEMKIINEIPPKNDEDEDNNINNNNN 1839
Score = 49 (22.3 bits), Expect = 8.5e-50, Sum P(6) = 8.5e-50
Identities = 21/87 (24%), Positives = 34/87 (39%)
Query: 1293 HNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPA 1352
+N + N NN TP + P + NT + V +++ T + TP
Sbjct: 2914 NNNNNNNNNNINNNNPSTPTNITPPP-----QPLNANNTVTTVTPTPITTTTTTAATTPT 2968
Query: 1353 METAPGFDIPIEKGVEQSGTEIDAKVK 1379
+P PI+ ++S E KVK
Sbjct: 2969 T-VSP----PIKPVSKRSKKEPTVKVK 2990
Score = 47 (21.6 bits), Expect = 5.3e-50, Sum P(6) = 5.3e-50
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 2336 GVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDV-VDGA 2394
G V++ + P+S L++ S+K+ SS S SK K P D+ V G
Sbjct: 2169 GNVTVSGYSGSSTPSSSLSSSTSSISTSNKDKKKSSSSSSSSK----KRLVPDDIIVTGG 2224
Query: 2395 VALENTSE 2402
VA + S+
Sbjct: 2225 VANSDKSD 2232
Score = 46 (21.3 bits), Expect = 1.4e-50, Sum P(4) = 1.4e-50
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 2415 EDKTENEIEEDPVVNSVAVEESKGSEAD 2442
E E E E+ N + +E+ KG+E +
Sbjct: 1760 EKDNEKEREKQEKENEIEIEKEKGNEKE 1787
Score = 46 (21.3 bits), Expect = 2.7e-49, Sum P(6) = 2.7e-49
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 1880 VEREKSEELGLPSLSSATKEEKIDGSLDKDPDSN 1913
+E+EK E + KE + D DKD D +
Sbjct: 1778 IEKEKGNEKENEKENEKEKENERDKDKDKDQDQD 1811
Score = 44 (20.5 bits), Expect = 5.3e-50, Sum P(6) = 5.3e-50
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 2010 EEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANEE 2069
EE E D D A ++ + + E G + G G VM + + L LS N +
Sbjct: 1947 EEDGADDEADDDGDDEADDENEGNDFEGGGRGGRVGEGKKVMIEKKKPLLFFELSGINNQ 2006
Query: 2070 E 2070
E
Sbjct: 2007 E 2007
Score = 43 (20.2 bits), Expect = 3.1e-53, Sum P(5) = 3.1e-53
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 522 QHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
Q + ++ ++ + ++Q +++ K+ + + D LKE EK
Sbjct: 1701 QQQKQKQQQQQQQQQQQQQQQQQQPKILKLDEKDKENLKENEKEK 1745
Score = 42 (19.8 bits), Expect = 1.8e-51, Sum P(5) = 1.8e-51
Identities = 30/138 (21%), Positives = 58/138 (42%)
Query: 855 SPPISDVSAGPESKSNLQSENNSGGLR--LSKSVSMGKQDALSQELSNKIQVQPCGVATS 912
SPP+ +S +K +L S+ G ++ +++ KQ +E K+ ++
Sbjct: 2067 SPPL--ISFEAFAKPSL-SKLKRGKIQKQVAQQYVYSKQHTKEKEKERKLLMKMKKEKDK 2123
Query: 913 ADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVL 972
+ A +++ + R +Q I+ ++ SSS S S + + + GNV
Sbjct: 2124 IEKAKQEEERRAKEKR----DQKIHSKKSNSSSSTLSNSNNNVINNSNSGNVTVSGYSGS 2179
Query: 973 SENSSSKGGVIPILALSN 990
S SSS ++ SN
Sbjct: 2180 STPSSSLSSSTSSISTSN 2197
Score = 42 (19.8 bits), Expect = 1.7e-49, Sum P(6) = 1.7e-49
Identities = 30/134 (22%), Positives = 52/134 (38%)
Query: 2263 NNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGP 2322
NN+I+ GN+ + P SS I +K +K+S +S+ + P
Sbjct: 2160 NNVINNSNSGNVTVSGYSGSSTPSSSLSSSTSSISTSNK---DKKKSSSSSSSSKKRLVP 2216
Query: 2323 DAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSV--SQIESKEP 2380
D I GGV + +++D A E++ S + V S+ S K+
Sbjct: 2217 D------DIIVTGGVAN---SDKSDAELEDFAGSLEESLVSKQGGVPSTTTNSSTSRKKS 2267
Query: 2381 EAKAFEPMDVVDGA 2394
E F+ +G+
Sbjct: 2268 EYDLFDASSQDEGS 2281
Score = 41 (19.5 bits), Expect = 2.0e-49, Sum P(5) = 2.0e-49
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 2011 EKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSED 2057
E +EK+ D+ ++ KE+ +E + G EK E+
Sbjct: 1752 ENENENEKEKDNEKEREKQEKENEIEIEKEKGNEKENEKENEKEKEN 1798
Score = 41 (19.5 bits), Expect = 8.8e-49, Sum P(6) = 8.8e-49
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 1881 EREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGS 1923
E+EK E + + KE+ + +K N + +E KG+
Sbjct: 1742 EKEKENENENENENENEKEKDNEKEREKQEKENEIEIEKEKGN 1784
Score = 40 (19.1 bits), Expect = 6.7e-50, Sum P(6) = 6.7e-50
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 520 DTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEK 566
D ++ ++ +E + E E E EK + E K E +EK
Sbjct: 1734 DKENLKENEKEKENENENENENENEKEKDNEKEREKQEKENEIEIEK 1780
Score = 40 (19.1 bits), Expect = 7.0e-49, Sum P(6) = 7.0e-49
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 1442 NTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPINSGTECSTVSVKT 1501
NT + P+ T +T +VS V+ S++ P + I+ +
Sbjct: 2946 NTVTTVTPTPITTTTTTAATTPTTVSPPIKPVSKRSKKEPTVKVKKISKKEAAAQAQAAA 3005
Query: 1502 DVGNHP-QNVEPT 1513
+ P Q+ +P+
Sbjct: 3006 QAASLPNQSSQPS 3018
Score = 38 (18.4 bits), Expect = 1.6e-51, Sum P(6) = 1.6e-51
Identities = 15/72 (20%), Positives = 24/72 (33%)
Query: 890 KQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPS 949
+Q Q+ + Q QP + + P Q Q ++ Q QP P + P
Sbjct: 2555 QQQQQQQQQPQQPQ-QPQQLQQPQQLQQPQQLQQPQQLQPQQLQQPPQQPQSQQLQQPPQ 2613
Query: 950 GSTPAQVPSMDL 961
Q P +
Sbjct: 2614 QIQQLQQPQAQI 2625
Score = 38 (18.4 bits), Expect = 1.3e-50, Sum P(6) = 1.3e-50
Identities = 9/48 (18%), Positives = 20/48 (41%)
Query: 1993 PEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ 2040
P++ P+ L P L P++ + + P + P+ ++ Q
Sbjct: 2567 PQQ-PQQLQQPQQLQQPQQLQQPQQLQPQQLQQPPQQPQSQQLQQPPQ 2613
Score = 38 (18.4 bits), Expect = 3.2e-16, Sum P(4) = 3.2e-16
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 1377 KVKWKNTPLPGEAIVAGIEVFKP 1399
K K+ N P+ G ++ +++ P
Sbjct: 1248 KSKYYNRPIYGRDLIESVKITDP 1270
Score = 37 (18.1 bits), Expect = 5.5e-49, Sum P(6) = 5.5e-49
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 1911 DSNLVVLEDSKGSIGDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQ 1970
D + LED GS+ + + Q GV P ++ S + ++ D SS+ + +++
Sbjct: 2229 DKSDAELEDFAGSLEESLVSKQGGV--PSTTTN-SSTSRKKSEYDL-FDASSQDEGSTNE 2284
Query: 1971 S 1971
S
Sbjct: 2285 S 2285
Score = 37 (18.1 bits), Expect = 3.1e-18, Sum P(4) = 3.1e-18
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 291 HTSGGDRGALIDKFNQQDSPFFIFLL 316
+ +G ++ + D+ QQ PF LL
Sbjct: 2418 NNNGNNKSPIGDQQQQQQPPFQFSLL 2443
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 591 (213.1 bits), Expect = 3.2e-53, P = 3.2e-53
Identities = 142/353 (40%), Positives = 197/353 (55%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++ +K V KF+VLLT+YE + D+ L I+W +++DE HR+KN K L
Sbjct: 808 VFRMKKEVQIKFHVLLTSYELITI--DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 865
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXX 131
Y+ ++LLLTGTP FN+ E F + F D S +
Sbjct: 866 YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKEDQ-- 916
Query: 132 XXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVE 187
I +LH +L P +LRRLK V +P K E +VR E S Y K ++ R
Sbjct: 917 --------IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 968
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEM 246
E L S G S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +
Sbjct: 969 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 1028
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN
Sbjct: 1029 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1088
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKR 359
+ F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ +
Sbjct: 1089 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQTK 1141
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 375 (137.1 bits), Expect = 3.2e-53, Sum P(3) = 3.2e-53
Identities = 73/159 (45%), Positives = 106/159 (66%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL LD LL +LK+ HRVL +S MTR++D++E+Y+ ++++ Y+RLDG + +R ++
Sbjct: 1132 GKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMV 1191
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
F Q + F+FLLS RAGG+G+NL AADTVI +D+DWNP VD QA RAHR+GQ + V
Sbjct: 1192 ADF-QSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV 1250
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNT 400
V R T+EE++ A+ K + I+ G F +T
Sbjct: 1251 TVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDT 1289
Score = 290 (107.1 bits), Expect = 3.2e-53, Sum P(3) = 3.2e-53
Identities = 73/229 (31%), Positives = 125/229 (54%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V++T+Y+ ++ D +++W Y+++DE +K+++ L +Q +RLLLTG
Sbjct: 625 FHVVITSYQLVVQ--DVKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQFQCRNRLLLTG 682
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F+S E+F++WF+K ES+ +N ++R
Sbjct: 683 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENK-------SAIDENQLSR 735
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVE-----ENL--GSIGN 195
LH +L+PF+LRR+K VENEL +KIE L C+ ++ Q+LL + ++ E+L S+G+
Sbjct: 736 LHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQALKNKISIEDLLQSSMGS 795
Query: 196 -----SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHY-LPPIV 238
S S+ N VM+ R +CNHP L + +E+ + P H L P +
Sbjct: 796 AQQAHSTTSSLMNLVMQFRKVCNHPDLFE--RQEIRS--PFHMSLKPFI 840
Score = 50 (22.7 bits), Expect = 1.5e-52, Sum P(4) = 1.5e-52
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 771 SIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSE 805
S+PTA + S +P+ V + + S+ A NS+
Sbjct: 1522 SLPTALIRSSTTPTFVPAGTSSPQAKSSAVATNSQ 1556
Score = 49 (22.3 bits), Expect = 3.2e-53, Sum P(3) = 3.2e-53
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 1291 EKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQE-KVTNTSSFVNL-ADLSSDDKTCS 1348
EK+ E+ R +++PE K ++ V+ P A SF+++ D +
Sbjct: 1333 EKYAERKRKEDDPESKRKKEGVNMVIPYVPSADNSNLSADGEDSFISVDMDSAIPSPFSE 1392
Query: 1349 VTPAMETAPGFDIPIEKGVEQSGTEIDAKV 1378
++ + E P IP ++ +D V
Sbjct: 1393 ISLSSELQPS-SIPADESSSDMLVIVDEPV 1421
Score = 45 (20.9 bits), Expect = 8.4e-53, Sum P(3) = 8.4e-53
Identities = 24/110 (21%), Positives = 45/110 (40%)
Query: 2306 EKESIASAVPL----DESK-GPDAEVSSQTAIEGGGVVSIPVPE---EADGPASFLAAEE 2357
+KE + +P D S D E S +++ + P E ++ S + A+E
Sbjct: 1350 KKEGVNMVIPYVPSADNSNLSADGE-DSFISVDMDSAIPSPFSEISLSSELQPSSIPADE 1408
Query: 2358 EKNECSD--KEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMG 2405
++ EPV S+ + P + A D ++G + + +S G G
Sbjct: 1409 SSSDMLVIVDEPVSSAQQSRATNSPASIAGSVSDTMNGVSSQDISSPGRG 1458
Score = 45 (20.9 bits), Expect = 1.5e-52, Sum P(4) = 1.5e-52
Identities = 27/135 (20%), Positives = 57/135 (42%)
Query: 450 QRREEEMATWRKLIRGLGTDGEPLPP--LPSRLVTDDDLKALYEAMKIYDAPKTGVSPNV 507
QR +E+ R +I G + L P + S L+ D++L+ + +++ K + +
Sbjct: 1267 QRAKEKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDEELE---KKLRLRQEEKRQLEESS 1323
Query: 508 GVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQ-AESSDSPKLKEEGLEK 566
VK + + Y KR + E + +E + S+D+ L +G +
Sbjct: 1324 KVKERKRK-----REKYAERKRKED--DPESKRKKEGVNMVIPYVPSADNSNLSADGEDS 1376
Query: 567 SLPTVVSSSAPAVYS 581
+ + S+ P+ +S
Sbjct: 1377 FISVDMDSAIPSPFS 1391
Score = 44 (20.5 bits), Expect = 6.2e-52, Sum P(4) = 6.2e-52
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 1191 QSSDDKTCSVTPTVETPPPG--FNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEA 1248
+SS D V V + NSP G ++ T N S + +P G + S+
Sbjct: 1408 ESSSDMLVIVDEPVSSAQQSRATNSPASIAGSVSDTMNGVSSQDISSPGRGRSNRSRG-- 1465
Query: 1249 LKPENKAQAGR 1259
+P+ AG+
Sbjct: 1466 -RPKGSGGAGK 1475
Score = 43 (20.2 bits), Expect = 7.9e-52, Sum P(4) = 7.9e-52
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 1082 TPTTGEAPRRRGKKQGSG 1099
+P G + R RG+ +GSG
Sbjct: 1454 SPGRGRSNRSRGRPKGSG 1471
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 615 (221.5 bits), Expect = 3.5e-53, Sum P(2) = 3.5e-53
Identities = 146/386 (37%), Positives = 211/386 (54%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFNVLLTTYEY++ D LS+ W ++ +DE HR+KN +L L+ + S RLL+T
Sbjct: 551 KFNVLLTTYEYVLV--DSSFLSQFNWQFMAVDEAHRLKNRDSQLYIKLQEFNSPARLLIT 608
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP + N D + N + + + +
Sbjct: 609 GTPIQNNLAELSALLDFLNPGLVNVDADM--------DLNSEAASEK-----------LA 649
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGR 199
L + + PF+LRR K KVE++LP K E+++R E S Q K + +N ++ +KG+
Sbjct: 650 ELTKAISPFMLRRTKTKVESDLPPKTEKIIRVELSDVQLEYYKNILTKNYAALNEGTKGQ 709
Query: 200 --SVHNSVMELRNICNHPYLSQLHAEEV--DTLIPKHYLPPIVRLCGKLEMLDRLLPKLK 255
S+ N +MEL+ NHP++ ++ + + L ++ GK+ +LD+LL KLK
Sbjct: 710 KQSLLNIMMELKKASNHPFMFPSAETKILEGSTRREDVLRALITSSGKMMLLDQLLAKLK 769
Query: 256 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 315
HRVL FS M ++LD++ DY+ ++ Y Y RLDG R I+ +N DS F F+
Sbjct: 770 RDGHRVLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIPSASRRLAIEHYNAPDSSDFAFI 829
Query: 316 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 375
LS RAGG+G+NL ADTVI+FD+DWNPQ DLQA ARAHRIGQ + V V R + TVEE+
Sbjct: 830 LSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTVEEE 889
Query: 376 VRASAEHKLGVANQSITAGFFDNNTS 401
V A +KL + +I G D S
Sbjct: 890 VIERARNKLLLEFITIQRGVTDKEAS 915
Score = 42 (19.8 bits), Expect = 7.1e-51, Sum P(4) = 7.1e-51
Identities = 16/100 (16%), Positives = 35/100 (35%)
Query: 1245 KTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPE 1304
+ +A N ++N ++ S P +A P + + H EQ R+++
Sbjct: 1295 RDKASNGSNTTAKRAVDNHHRNARKSTSRPHASASVSASPAPSLQRKGHREQDRSRHRSH 1354
Query: 1305 VKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDD 1344
G + + ++ + +D SS+D
Sbjct: 1355 THGGRDSMERHNTPNRDS-RARSINENDRRYRPSDASSED 1393
Score = 40 (19.1 bits), Expect = 1.1e-50, Sum P(4) = 1.1e-50
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 1495 STVSVKTDVGNHPQNVEPTSASPERS 1520
S + K V NH +N +++ P S
Sbjct: 1302 SNTTAKRAVDNHHRNARKSTSRPHAS 1327
Score = 39 (18.8 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 19/83 (22%), Positives = 33/83 (39%)
Query: 1955 EAKIDGSSEKDPVSSQSVLEGSKETVA-EAGDQMDISIMPEKLPEHLDIPASLATPEEKT 2013
E K + + D V+E ++ AGD+ D K + S+
Sbjct: 1016 EIKAEEKKKADEKYLADVIEQNRPRKRIVAGDERDTRA-ERKAKRQARVQVSM----NDD 1070
Query: 2014 EGSEKDPDSSFAAQEDPKESVVE 2036
+G + +P+ A+ DPK +VE
Sbjct: 1071 DGDDSEPN----AKADPKRPLVE 1089
Score = 39 (18.8 bits), Expect = 7.1e-51, Sum P(4) = 7.1e-51
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1232 GDHTPVSGHTLASKTEALKPENKA 1255
GD + H + KTE L E+K+
Sbjct: 1251 GDKFFLEEHRVERKTERLNAEDKS 1274
Score = 37 (18.1 bits), Expect = 3.5e-53, Sum P(2) = 3.5e-53
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 692 SQSASACPSTPMQPKGRGRRIQS 714
S S SA P+ +Q KG + +S
Sbjct: 1327 SASVSASPAPSLQRKGHREQDRS 1349
Score = 37 (18.1 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 717 QVPRRRGKKI----GLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGE 761
++ +RRG+++ G DI S + + ++ Q+E + GGE
Sbjct: 939 RILKRRGQRMFEQTGNQAKLEQLDIDSVLANAELHQTEQAEGIQADGGE 987
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 601 (216.6 bits), Expect = 3.8e-53, Sum P(3) = 3.8e-53
Identities = 142/372 (38%), Positives = 208/372 (55%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F VLLTTYE +M+ H ++ W +I+DEGHRIKN K+ + LK ++ H ++LTG
Sbjct: 1000 FEVLLTTYETIMSDHS--SFVRVPWRALILDEGHRIKNDKSKVLSKLKSIKTEHSIILTG 1057
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP FNS ++F ++ E + +++
Sbjct: 1058 TPLQNDMKELWTMLNFLDPDKFNSCQEFLDEYSDLKEESQ-----------------VSK 1100
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNS-KGRS 200
LHQ+L P++LRR+K VE +P K E +++ E S+ QK + + E N + K ++
Sbjct: 1101 LHQLLSPYLLRRMKEDVELSIPIKEETVIQVELSSTQKTYYRAILERNREFLSRGIKQKT 1160
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV---DTLIPKHYLPPI-VRLCGKLEMLDRLLP 252
+ N ++++R +CNHP+L E + + + L + V+ KL ++D+LL
Sbjct: 1161 NLPKLSNIMIQIRKVCNHPFLIPGAEESIVKQEKIAGDEELGELLVKSSSKLVLVDKLLQ 1220
Query: 253 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 312
+LKA H+VL FS M L+++EDYL +++Y Y RLDG R A ID+F + + F
Sbjct: 1221 RLKAEGHQVLIFSQMVESLNILEDYLQYREYTYERLDGSIKSEVRQASIDRFQDKGANRF 1280
Query: 313 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 372
+FLLS RAGGVG+NL ADTVI+FD+DWNPQ DLQAQAR HRIGQ +V V R T T
Sbjct: 1281 VFLLSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNTY 1340
Query: 373 EEQVRASAEHKL 384
EE + A KL
Sbjct: 1341 EEYLFECATKKL 1352
Score = 69 (29.3 bits), Expect = 3.8e-53, Sum P(3) = 3.8e-53
Identities = 38/196 (19%), Positives = 65/196 (33%)
Query: 1169 EGKDXXXXXXXXXXXXXEVAKKQSSDDKTCSVTPTVETPPPGFNSPNENPGELTGTK--- 1225
E K+ +V +K +K S E N+ N E +
Sbjct: 1880 EEKEKSTESKSSSNDEKDVCEKVEKGEKEISSDKVDENKEKVENNEKVNVDEKSKDNEKS 1939
Query: 1226 NDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPG 1285
ND+ D+ + E K + K+Q S DD+ + N + + P
Sbjct: 1940 NDSEKSKDNEKSKDDEKSKDDEKSKDDEKSQDDEKSKDDEKSKDDEKSKLEENQDESTP- 1998
Query: 1286 FDIPIEKHNEQSRNQNNPEVKGE---ETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSS 1342
++ E + S + + E+K E E A+ + TNT S + ++
Sbjct: 1999 MEVDKESKSTSSSEKQSIEIKEEKESEKKPQDNDNATENGVKSPSTTNTDSKLTSPSTAT 2058
Query: 1343 DDKTCSVT--PAMETA 1356
T + T P TA
Sbjct: 2059 TTTTTTTTTTPTTTTA 2074
Score = 64 (27.6 bits), Expect = 3.8e-52, Sum P(4) = 3.8e-52
Identities = 40/186 (21%), Positives = 73/186 (39%)
Query: 1830 QDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
++K++E++ DE V + + + VDE + + ++ V+V E+ K E
Sbjct: 1882 KEKSTESKSSSN-DEKDVCEKVEKGEKEISSDKVDENKEKVE-NNEKVNVDEKSKDNEKS 1939
Query: 1890 LPSLSSATKEEKIDGSLDKDPDSNL--VVLEDSKGSIGDQMDCCQSGVVVPENLSDFCQP 1947
S S E+ D KD + + +D + S D+ + EN D P
Sbjct: 1940 NDSEKSKDNEKSKDDEKSKDDEKSKDDEKSQDDEKSKDDEKSKDDEKSKLEEN-QDESTP 1998
Query: 1948 SSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLA 2007
E+K SSEK + ++ KE+ + D + + K P + + L
Sbjct: 1999 ME--VDKESKSTSSSEKQSIE----IKEEKESEKKPQDNDNATENGVKSPSTTNTDSKLT 2052
Query: 2008 TPEEKT 2013
+P T
Sbjct: 2053 SPSTAT 2058
Score = 60 (26.2 bits), Expect = 4.9e-53, Sum P(3) = 4.9e-53
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 1192 SSDDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGD-HTPVS-GHTLASKTEAL 1249
SS T S + V++P PG N NP +++ DA + D +TP L L
Sbjct: 1379 SSSTTTASSSSNVDSPSPGDTPSNSNPFKVSA--GDAPLVEDPNTPSQISQMLKYGAAYL 1436
Query: 1250 KPENKAQAGRIENIANSSPDDKSL 1273
E +A + + I + DK L
Sbjct: 1437 FAETTDEANKQDKIMINEDIDKIL 1460
Score = 58 (25.5 bits), Expect = 4.9e-53, Sum P(3) = 4.9e-53
Identities = 44/222 (19%), Positives = 82/222 (36%)
Query: 1295 EQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAME 1354
E N ++K EE S+E+ +S+ EK ++SSD K +E
Sbjct: 1867 EPKSNDKETQIKVEEKEKSTESKSSSN---DEKDVCEKVEKGEKEISSD-KVDENKEKVE 1922
Query: 1355 TAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDT 1414
++ EK + + K K N + E K + K+ D K ++
Sbjct: 1923 NNEKVNVD-EKSKDNEKSNDSEKSK-DNEKSKDDEKSKDDEKSKDDEKSQDDEKSKDDEK 1980
Query: 1415 VDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVA 1474
D K + + D S + + ++ S K +E +S + P D+
Sbjct: 1981 SKDDE--KSKLEENQDESTPMEVDKESKSTSSSEKQSIEIKEEKESEKKPQ-----DN-- 2031
Query: 1475 DHSRETPILSGSPINSGTECSTVSVKTDVGNHPQNVEPTSAS 1516
D++ E + S S N+ ++ ++ S T PT+ +
Sbjct: 2032 DNATENGVKSPSTTNTDSKLTSPSTATTTTTTTTTTTPTTTT 2073
Score = 58 (25.5 bits), Expect = 3.1e-49, Sum P(4) = 3.1e-49
Identities = 21/89 (23%), Positives = 36/89 (40%)
Query: 700 STPMQPKGRGRRIQSGE-QVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPS 758
STPM+ + S E Q + +K P +D+ G + S+ +PS
Sbjct: 1996 STPMEVDKESKSTSSSEKQSIEIKEEKESEKKPQDNDNATENGVKSPSTTNTDSKLTSPS 2055
Query: 759 GGESTATDGNVSSIPTAPVPDSVSPSAVK 787
+T T ++ PT +V P ++K
Sbjct: 2056 TATTTTTT-TTTTTPTTTTATTVKPLSLK 2083
Score = 57 (25.1 bits), Expect = 8.6e-51, Sum P(4) = 8.6e-51
Identities = 37/188 (19%), Positives = 73/188 (38%)
Query: 866 ESKSNLQSENNSGGLR-LSKSVSMGKQDALSQELS-NKIQVQPCGVATSADVAGPDQKPA 923
E + + +S+++S + + + V G+++ S ++ NK +V+ + D D + +
Sbjct: 1881 EKEKSTESKSSSNDEKDVCEKVEKGEKEISSDKVDENKEKVEN-NEKVNVDEKSKDNEKS 1939
Query: 924 EQSVRVVQSNQPIN-LPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGV 982
S + + + + + D S+ + S D D K L EN +
Sbjct: 1940 NDSEKSKDNEKSKDDEKSKDDEKSKDDEKSQDDEKSKDDEKSKDDEKSKLEENQDESTPM 1999
Query: 983 IPILALSNMKAVERVNIQSFEEK-----------ACTNASKSKATLPALDSITEPYTGST 1031
+ + E+ +I+ EEK A N KS +T +T P T +T
Sbjct: 2000 EVDKESKSTSSSEKQSIEIKEEKESEKKPQDNDNATENGVKSPSTTNTDSKLTSPSTATT 2059
Query: 1032 NTEGISNT 1039
T + T
Sbjct: 2060 TTTTTTTT 2067
Score = 56 (24.8 bits), Expect = 7.9e-53, Sum P(3) = 7.9e-53
Identities = 45/213 (21%), Positives = 81/213 (38%)
Query: 1291 EKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQ--EKVTNTSSFVNLADLSSDDKTCS 1348
EK E S++ +N E E E S++ ++ EKV N VN+ + S D++ +
Sbjct: 1883 EKSTE-SKSSSNDEKDVCEKVEKGEKEISSDKVDENKEKVENNEK-VNVDEKSKDNEKSN 1940
Query: 1349 VTPAMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSV 1408
+ EK + ++ D K K E E K + K+ D
Sbjct: 1941 DS-------------EKSKDNEKSKDDEKSKDDEKSKDDEKSQDD-EKSKDDEKSKDDEK 1986
Query: 1409 EKLEDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKS-TEGPSVS 1467
KLE+ D+ S E+ S S ++ ++S K P + ++ + PS +
Sbjct: 1987 SKLEENQDE-STPMEVDKESKSTSSSEKQSIEIKEEKESEKKPQDNDNATENGVKSPSTT 2045
Query: 1468 MKADDVADHSRETPILSGSPINSGTECSTVSVK 1500
+ S T + + + T + +VK
Sbjct: 2046 NTDSKLTSPSTATTTTTTTTTTTPTTTTATTVK 2078
Score = 50 (22.7 bits), Expect = 3.8e-53, Sum P(3) = 3.8e-53
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 739 SPGPDPK-TNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVK-GQSGTI-DP 795
S D K TN P S + + S + ++ NV S P + +P V G + + DP
Sbjct: 1360 STNKDKKQTNTTPISTTTSSSSTTTASSSSNVDSPSPGDTPSNSNPFKVSAGDAPLVEDP 1419
Query: 796 SS 797
++
Sbjct: 1420 NT 1421
Score = 47 (21.6 bits), Expect = 3.2e-50, Sum P(3) = 3.2e-50
Identities = 18/87 (20%), Positives = 34/87 (39%)
Query: 779 DSVSPSAVKGQSGTIDPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQ 838
D+ + + VK S T + S + + ++ T T + K +++
Sbjct: 2032 DNATENGVKSPS-TTNTDSKLTSPSTATTTTTTTTTTTPTTTTATTVKPLSLKNPCKESA 2090
Query: 839 SGGVTPRRR-GKRQALGSPPISDVSAG 864
V G +Q L + P+SDV+ G
Sbjct: 2091 YYLVIVNEDFGSQQILRTYPMSDVNQG 2117
Score = 46 (21.3 bits), Expect = 5.4e-48, Sum P(4) = 5.4e-48
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 528 KRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSS--SAPAVYST 582
K ++ S E+Q E + EK + + D+ E G++ T S ++P+ +T
Sbjct: 2003 KESKSTSSSEKQSIEIKEEKESEKKPQDNDNATENGVKSPSTTNTDSKLTSPSTATT 2059
Score = 45 (20.9 bits), Expect = 1.5e-49, Sum P(4) = 1.5e-49
Identities = 22/89 (24%), Positives = 31/89 (34%)
Query: 1071 VSVPVKRHGRKTPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTI 1130
V+V K + E + K + S D + D K KS+D SK
Sbjct: 1927 VNVDEKSKDNEKSNDSEKSKDNEKSKDDEKSKDDEKSKDDEK--SQDDEKSKDDEKSKDD 1984
Query: 1131 SLRSKQETADVNDVARVMKEIFSETCSSK 1159
+E D + V KE S + S K
Sbjct: 1985 EKSKLEENQDESTPMEVDKESKSTSSSEK 2013
Score = 44 (20.5 bits), Expect = 8.6e-51, Sum P(4) = 8.6e-51
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1270 DKSLPMVPNLETAPPG-FDIPIEKHNEQSRNQNN 1302
D L ++ N++ P F +N+Q+ N NN
Sbjct: 2239 DPELDLLSNVKRGQPNTFSPNPTSNNDQNNNNNN 2272
Score = 43 (20.2 bits), Expect = 5.8e-50, Sum P(4) = 5.8e-50
Identities = 22/92 (23%), Positives = 35/92 (38%)
Query: 2173 VQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIV-PETVPEELGLPS-SPM 2230
V +E K+ S EKQ I + ES E +P + +G+ P T + L S S
Sbjct: 2001 VDKESKSTSSSEKQSIEIKEEKES---EKKPQDNDNATENGVKSPSTTNTDSKLTSPSTA 2057
Query: 2231 VVXXXXXXXXXXXXPSASSIPRGESKGPDAEA 2262
+A+++ K P E+
Sbjct: 2058 TTTTTTTTTTTPTTTTATTVKPLSLKNPCKES 2089
Score = 41 (19.5 bits), Expect = 3.1e-49, Sum P(4) = 3.1e-49
Identities = 16/88 (18%), Positives = 39/88 (44%)
Query: 846 RRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQ 905
+RG+ P S+ + +N ++NN+ + S S + Q++ + + + Q +
Sbjct: 2249 KRGQPNTFSPNPTSNNDQNNNNNNNNSNQNNTDNID-SDSGNNNNQNSSTNQQQQQQQSE 2307
Query: 906 PCGVATSADVAGPDQKPAEQSVRVVQSN 933
+ +S + QK +Q ++ S+
Sbjct: 2308 K--IPSSESLRRRIQKVTDQILKKEHSD 2333
Score = 40 (19.1 bits), Expect = 3.8e-52, Sum P(4) = 3.8e-52
Identities = 19/86 (22%), Positives = 32/86 (37%)
Query: 1265 NSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFE 1324
NS P SL A D+ ++ ++E + P+ K + A S E
Sbjct: 1472 NSKPS--SLSGFSKATFASSETDMNVDMNDENFWEKVLPDYKTVKQLEEKLASGSALQSE 1529
Query: 1325 QEKVTNTSSFVNLADLSSDDKTCSVT 1350
+ + ++LA DD SV+
Sbjct: 1530 ESRAIFVQDILDLAQTKKDDVVDSVS 1555
Score = 39 (18.8 bits), Expect = 1.5e-49, Sum P(4) = 1.5e-49
Identities = 17/66 (25%), Positives = 24/66 (36%)
Query: 1774 ESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKA 1833
E +K D + K +L D + E KS + EK I + S QD
Sbjct: 1973 EKSKDDEKSKDDEKSKLEENQDESTPMEVDKESKSTSSSEKQSIEIKEEKESEKKPQDND 2032
Query: 1834 SEAEIG 1839
+ E G
Sbjct: 2033 NATENG 2038
Score = 38 (18.4 bits), Expect = 1.9e-49, Sum P(4) = 1.9e-49
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 2398 ENTSEGMGGPSPPLVIAEDKTENEIEEDPV 2427
+++S+G GG ++ +D E ++ V
Sbjct: 1629 DSSSDGGGGSDTDFILPDDGDSYESDDQHV 1658
Score = 38 (18.4 bits), Expect = 1.9e-49, Sum P(4) = 1.9e-49
Identities = 18/103 (17%), Positives = 45/103 (43%)
Query: 2340 IPVPEEADGPASFLAAEEEKNECSDKEPVGSSVS--QIESKEPEAKAFEPMDVVDGAVAL 2397
I V E+ S ++ +EK+ C E +S +++ + + + E ++V + +
Sbjct: 1877 IKVEEKEKSTESKSSSNDEKDVCEKVEKGEKEISSDKVDENKEKVENNEKVNVDEKSKDN 1936
Query: 2398 ENTSEGMGGPSPPLVIAEDKTENEIEEDPVVNSVAVEESKGSE 2440
E +++ ++K++++ + S E+SK E
Sbjct: 1937 EKSNDSEKSKDNEKSKDDEKSKDDEKSKDDEKSQDDEKSKDDE 1979
Score = 37 (18.1 bits), Expect = 4.6e-50, Sum P(4) = 4.6e-50
Identities = 20/138 (14%), Positives = 51/138 (36%)
Query: 1205 ETPPPGFNSPNENPGELT-GTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIE-- 1261
+TP + P+ + + G+ N+ + + + G + S + + P+ + +
Sbjct: 2876 QTPEGIYMKPHASITVINHGSNNNNNNNNINNNMMGSGIGSPSISTSPQQRQPNLPLSPS 2935
Query: 1262 NIANSSPDDKSLPMVPNLETAPPGFDIPIEK--HNEQSRNQNNPEVKGEETPVSSEAPAS 1319
+ S + P+ P + P + H +Q + Q ++P + P+
Sbjct: 2936 HHQQSQQHHQQQPLSPQRQQIPKSTQQKSHQQHHQQQQQQQQQNHHHHHQSPQQHQLPSI 2995
Query: 1320 TEAFEQEKVTNTSSFVNL 1337
E + + SF+ +
Sbjct: 2996 IEVEVKLVGQDAGSFIKM 3013
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 399 (145.5 bits), Expect = 4.0e-53, Sum P(4) = 4.0e-53
Identities = 92/218 (42%), Positives = 131/218 (60%)
Query: 183 MKRVEENLGSIGNSKGRSVHNSVME-LRNICNHPYLSQLHA--EEVDTLIPKHYLPPIVR 239
++R +NL S + + N V + LR P L+ LH E+ T P P +++
Sbjct: 1603 IRRYVQNLSSTHWQHEQRIENIVDQALR-----PKLALLHPIISEMTTKFPD---PRLIQ 1654
Query: 240 L-CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRG 298
CGKL+ +DRLL +LK HRVL F+ MT++LDV+E +L + + YLRLDG T R
Sbjct: 1655 YDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQ 1714
Query: 299 ALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQK 358
L+++FN D F F+LS R+GGVG+NL ADTVI +D+DWNP +D QAQ R HRIGQ
Sbjct: 1715 ILMERFNG-DKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQT 1773
Query: 359 RDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFF 396
RDV + R + +T+E + A K +++ +I G F
Sbjct: 1774 RDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNF 1811
Score = 270 (100.1 bits), Expect = 4.0e-53, Sum P(4) = 4.0e-53
Identities = 66/199 (33%), Positives = 105/199 (52%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V +T+Y+ ++ D+ + +W Y+I+DE IKN + L ++ + RLLLTG
Sbjct: 1014 FHVCITSYKLVVQ--DQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTG 1071
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F+S +F +WF+ P + + + +I R
Sbjct: 1072 TPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNET-------LITR 1124
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLL----MKRVE--ENLGSIGNS 196
LH+V+RPF+LRRLK +VE ++P+K E ++ C S Q+ L M R + E L + GN
Sbjct: 1125 LHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQT-GNL 1183
Query: 197 KGRSVHNSVMELRNICNHP 215
SV N +M+LR +CNHP
Sbjct: 1184 L--SVINVLMQLRKVCNHP 1200
Score = 63 (27.2 bits), Expect = 4.0e-53, Sum P(4) = 4.0e-53
Identities = 39/199 (19%), Positives = 74/199 (37%)
Query: 748 EQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALNSELN 807
+Q Q L +G T ++S+ A + S S+V T+ ++ S +N
Sbjct: 2832 QQQQQGQLPVAGQPQQVTQHQIASLVKASTAAAASGSSVNAGGVTVSATNPTVQAGS-VN 2890
Query: 808 TNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISDV--SAGP 865
L + Q + T ++ R A G P +++ + GP
Sbjct: 2891 MTLPQLKPGSQIKVTMPNQMRHLQMQQQLTMPRKIS-RMTQLVSASGQPTATNIITTTGP 2949
Query: 866 ESKSNLQSENNSGGLRLSKSVSMGKQDALSQELS--NKIQVQPCGVATSADVAGPDQKPA 923
+ + Q SGG L S +Q Q++ N +Q Q + + ++ +
Sbjct: 2950 QQQQ--QGVTVSGGGTLPTVASQQQQQQHQQKVGGGNSVQAQLLHIQNTKGLS--NSVTM 3005
Query: 924 EQSVRVVQSNQPINLPATH 942
+Q +V++S Q L T+
Sbjct: 3006 QQIQQVMRSGQQGTLATTN 3024
Score = 54 (24.1 bits), Expect = 3.5e-52, Sum P(4) = 3.5e-52
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 899 SNKIQVQPCGVATSADV-AGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVP 957
SN Q+ V TS+ + AG Q+ A+QS +++ T + PS P Q+
Sbjct: 2466 SNTQQLVKTIVGTSSSLTAGQLQQLAQQSAVASGGQSSVSVVLTTPVQTLPSVVQP-QIG 2524
Query: 958 SMDLGNVASDTKEVLSENSSSK-GGVIPILALSNMKAV 994
S + S + + L NSS + G ++ +L + +V
Sbjct: 2525 SG--AQIVSISSQTLPVNSSPQLGSIVQTQSLPQVVSV 2560
Score = 48 (22.0 bits), Expect = 4.0e-53, Sum P(4) = 4.0e-53
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 535 SYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPA-VYSTE 583
+Y + T ++ M Q+E +S + K E ++ + T S P+ V TE
Sbjct: 1814 TYFKSSTIKDLFTMEQSEQDESSQEKSENKDRIVATTTLSDTPSTVVETE 1863
Score = 47 (21.6 bits), Expect = 2.7e-52, Sum P(3) = 2.7e-52
Identities = 23/94 (24%), Positives = 40/94 (42%)
Query: 1955 EAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLP---EHLDIPAS-LATPE 2010
E+ + S KD + + + L + TV E ++ + L + D+ A+ A E
Sbjct: 1834 ESSQEKSENKDRIVATTTLSDTPSTVVET-EKQSLRAFEHALAAAEDEQDVQATKTAKAE 1892
Query: 2011 EKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVS 2044
+ +E D + A EDP E G Q+ +S
Sbjct: 1893 VAADLAEFDENIPIAT-EDPN---AEGGPQVELS 1922
Score = 46 (21.3 bits), Expect = 1.3e-16, Sum P(4) = 1.3e-16
Identities = 26/122 (21%), Positives = 48/122 (39%)
Query: 299 ALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQK 358
A + K Q PFF + +G G L + + + A + GQ+
Sbjct: 1397 AKVAKTMQDGKPFFYLTPATNSGAAGARLTLTSKTTASASTTTSRTTVTASTTS---GQQ 1453
Query: 359 RDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKK 418
++R V+ + V+++ + K +AN + T AED + E L + +K
Sbjct: 1454 ----LIRDPIVKDLATHVKSTVQ-KQSIANGKTEP---EEETEAEDPYKVQE--LIQMRK 1503
Query: 419 EE 420
E+
Sbjct: 1504 EQ 1505
Score = 44 (20.5 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 29/127 (22%), Positives = 46/127 (36%)
Query: 671 VMVGIAPSSQPTT-AFVPVAPGSQ-SASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGL 728
V+ ++ S P A PV S + ++ +T P G + + + + R +I
Sbjct: 1336 VLKRVSASINPVNMALKPVVINSVVTTTSSSTTASSPTGALSVLSNSKLLGAR--SQINA 1393
Query: 729 VLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKG 788
PA G P P + S +G T T +S T +V+ S G
Sbjct: 1394 PTPAKVAKTMQDGK-PFFYLTPATNS-GAAGARLTLTSKTTASASTTTSRTTVTASTTSG 1451
Query: 789 QSGTIDP 795
Q DP
Sbjct: 1452 QQLIRDP 1458
Score = 41 (19.5 bits), Expect = 2.1e-52, Sum P(4) = 2.1e-52
Identities = 9/49 (18%), Positives = 26/49 (53%)
Query: 537 EEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTV--VSSSAPAVYSTE 583
++Q ++ +++ Q + + +++ +++ LPTV V + P + E
Sbjct: 2357 QQQQPQQVVQQVQQQQQQQQQQQQQQVVQQQLPTVSNVQQTLPVQQTVE 2405
Score = 40 (19.1 bits), Expect = 9.8e-51, Sum P(4) = 9.8e-51
Identities = 15/71 (21%), Positives = 27/71 (38%)
Query: 948 PSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEEKAC 1007
P P QV + ++ + + SS G + + A + VN+ + K
Sbjct: 2840 PVAGQPQQVTQHQIASLVKASTAAAASGSSVNAGGVTVSATNPTVQAGSVNMTLPQLKP- 2898
Query: 1008 TNASKSKATLP 1018
S+ K T+P
Sbjct: 2899 --GSQIKVTMP 2907
Score = 39 (18.8 bits), Expect = 3.5e-52, Sum P(4) = 3.5e-52
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 554 SDSPKLKEEGLEKSLPTVVS-SSAPAV 579
+ SP+L +SLP VVS S+ P V
Sbjct: 2540 NSSPQLGSIVQTQSLPQVVSVSTLPTV 2566
Score = 39 (18.8 bits), Expect = 6.6e-16, Sum P(4) = 6.6e-16
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 456 MATWRKLIRGLGTDGEPLPPLPS-RLVTDDDLKALYEAMKI-YDAPKTGVSP 505
+A RKLI + T P P P+ + +++ A +I +A K G SP
Sbjct: 1264 LAPPRKLIEDIDTAPLPAPRCPNGKYRFHIRVRSAELAQRIKLNAVKVGASP 1315
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 594 (214.2 bits), Expect = 4.5e-53, Sum P(2) = 4.5e-53
Identities = 144/363 (39%), Positives = 203/363 (55%)
Query: 26 LLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPX 85
+L T ++ K D+ L + W +I +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 570 ILLTTYEILLK-DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 628
Query: 86 XXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQ 145
F E FS W + FE + LH+
Sbjct: 629 QNSLKELWSLLH------FIMPEKFSSW--EDFEEEHGKGREYGYAS----------LHK 670
Query: 146 VLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRSVH- 202
L PF+LRR+K VE LP K+E+++R E SA QK K + N ++ SKG +
Sbjct: 671 ELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGF 730
Query: 203 -NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRV 261
N +MEL+ CNH YL + + + + L ++R GKL +LD+LL +L+ +RV
Sbjct: 731 LNIMMELKKCCNHCYLIK-PPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV 789
Query: 262 LFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAG 321
L FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FLLS RAG
Sbjct: 790 LIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG 849
Query: 322 GVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAE 381
G+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE + A+
Sbjct: 850 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAK 909
Query: 382 HKL 384
K+
Sbjct: 910 KKM 912
Score = 187 (70.9 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 63/198 (31%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 567 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 624
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S EDF + K E ++
Sbjct: 625 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------YASLHKELEPFLLR 678
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L GS G++ G
Sbjct: 679 RV----KKDVEKSLPAKVEQILRMEMSALQK----QYYKWILTRNYKALSKGSKGSTSG- 729
Query: 200 SVHNSVMELRNICNHPYL 217
N +MEL+ CNH YL
Sbjct: 730 -FLNIMMELKKCCNHCYL 746
Score = 60 (26.2 bits), Expect = 4.5e-53, Sum P(2) = 4.5e-53
Identities = 34/120 (28%), Positives = 50/120 (41%)
Query: 2261 EANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESK 2320
EA + A GG+ R+ + S V+EE ++ S P+ SEK DE
Sbjct: 1303 EAQRLSGA--GGSKRRKARAKKNKAMKSIKVKEE-MKSDSSPLPSEKS--------DEDD 1351
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAE-EEKNECSDKEPVGSSVSQIESKE 2379
D E++S + + EE P F+ E EEK E +KE +I+ KE
Sbjct: 1352 DKD-EITS-VKHPNKKIKTERDSEERPEPDVFIKKESEEKREAKEKENKRELKREIKEKE 1409
Score = 58 (25.5 bits), Expect = 6.5e-52, Sum P(3) = 6.5e-52
Identities = 34/154 (22%), Positives = 59/154 (38%)
Query: 1961 SSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEK-LPEHLDIPASLATPEEKTEGSEKD 2019
S EK + K + E D+ DI EK E + A +EK EK
Sbjct: 1386 SEEKREAKEKENKRELKREIKEKEDKKDIK---EKDFKEKRENKVKEAIQKEKDIKEEKL 1442
Query: 2020 PDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANE-----EEMIEG 2074
+S ++E K+S V + G + + SE+L S+ E + ++
Sbjct: 1443 NESKSESKERSKKSSVSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQ 1502
Query: 2075 FDNDPTGISMA--VMDSKECAAEAADQM--CVSE 2104
D G+S + +++C + D + C+ E
Sbjct: 1503 LDRPEKGLSEREQLEHTRQCLIKIGDHITECLKE 1536
Score = 52 (23.4 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 2290 DVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADG- 2348
D++E+ + K KE+I + E K +++ S+ + V PV A G
Sbjct: 1413 DIKEKDFK--EKRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSVSDAPVHITASGE 1470
Query: 2349 PASFLAAEEEKNE-----CSDK-EPVGSSVSQIESKE 2379
P EE ++ C ++ PV +++ Q++ E
Sbjct: 1471 PVPISEESEELDQKTFSICKERMRPVKAALKQLDRPE 1507
Score = 47 (21.6 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 43/217 (19%), Positives = 86/217 (39%)
Query: 1803 VPEHKSENMGEKDDISS-EHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDE 1861
+P KS+ +KD+I+S +H + + ++ SE + P+ D F + E
Sbjct: 1342 LPSEKSDEDDDKDEITSVKHP--NKKIKTERDSE-------ERPEPDVFIKKE-----SE 1387
Query: 1862 LVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSK 1921
EA + + E+E +++ +E K+ ++ K+ D L +SK
Sbjct: 1388 EKREAKEKENKRELKREIKEKEDKKDIKEKDFKEK-RENKVKEAIQKEKDIKEEKLNESK 1446
Query: 1922 G---------SIGDQ-MDCCQSGVVVP--ENLSDFCQPSSSLA-----PWEAKIDGSSEK 1964
S+ D + SG VP E + Q + S+ P +A +
Sbjct: 1447 SESKERSKKSSVSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQLDRP 1506
Query: 1965 DP-VSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHL 2000
+ +S + LE +++ + + GD + + PE +
Sbjct: 1507 EKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQI 1543
Score = 47 (21.6 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 51/213 (23%), Positives = 84/213 (39%)
Query: 1824 GSSLVLQDKASEAE-IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHS----PVH 1878
G L+D +S E G R+ + V G + R +SGV + + +SH P+H
Sbjct: 1157 GCIKALKDNSSGTERTGGRLGK--VKGPTFR-ISGV------QVNAKLVISHEEELIPLH 1207
Query: 1879 VVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV--LEDSKGS---IGDQMDCCQS 1933
EE ++ TK D K+ DSNL++ E GS I D +
Sbjct: 1208 KSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLT 1267
Query: 1934 GVVVPENLSDFCQPSS--SLAPWEAKI-DGSSEKDPVSSQSVLEGSKETVAEAGDQMDIS 1990
++P++ Q + A + K+ K S GSK A A + + +
Sbjct: 1268 HKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEAQRLSGAGGSKRRKARA--KKNKA 1325
Query: 1991 IMPEKLPEHLDIPASLATPEEKTEGSEKDPDSS 2023
+ K+ E + +S E+ E +KD +S
Sbjct: 1326 MKSIKVKEEMKSDSSPLPSEKSDEDDDKDEITS 1358
Score = 46 (21.3 bits), Expect = 6.5e-52, Sum P(3) = 6.5e-52
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 1877 VHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSK 1921
+ V E KS+ LPS S ++K + + K P+ + DS+
Sbjct: 1329 IKVKEEMKSDSSPLPSEKSDEDDDKDEITSVKHPNKKIKTERDSE 1373
Score = 46 (21.3 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 35/180 (19%), Positives = 70/180 (38%)
Query: 1296 QSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMET 1355
++R + N +K + V E + + EK + + +K E
Sbjct: 1317 KARAKKNKAMKSIK--VKEEMKSDSSPLPSEKSDEDDDKDEITSVKHPNKKIKTERDSEE 1374
Query: 1356 APGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTV 1415
P D+ I+K E+ +AK K L E + + E+K D +++ +
Sbjct: 1375 RPEPDVFIKKESEEKR---EAKEKENKRELKRE-------IKEKEDKKD---IKEKDFKE 1421
Query: 1416 DDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPL-ETPL-IMKSTEGPSVSMKADDV 1473
+ VKE I + D + + + E S K + + P+ I S E +S +++++
Sbjct: 1422 KRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSVSDAPVHITASGEPVPISEESEEL 1481
Score = 43 (20.2 bits), Expect = 1.6e-49, Sum P(3) = 1.6e-49
Identities = 35/157 (22%), Positives = 56/157 (35%)
Query: 1216 ENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPM 1275
++P + T+ D+ R + K EA + ENK + R D K
Sbjct: 1360 KHPNKKIKTERDSEERPEPDVFIKKESEEKREAKEKENKRELKREIKEKEDKKDIKEKDF 1419
Query: 1276 VPNLETAPPGFDIPIEKH-NEQSRNQNNPEVKGEETPVS-SEAPAS-TEAFEQEKVTNTS 1332
E I EK E+ N++ E K S S+AP T + E ++ S
Sbjct: 1420 KEKRENKVKEA-IQKEKDIKEEKLNESKSESKERSKKSSVSDAPVHITASGEPVPISEES 1478
Query: 1333 SFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQ 1369
++ S + + P D P EKG+ +
Sbjct: 1479 EELDQKTFSICKER--MRPVKAALKQLDRP-EKGLSE 1512
Score = 42 (19.8 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 11/56 (19%), Positives = 27/56 (48%)
Query: 528 KRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPAVYSTE 583
KR +V+ ++ + + EK+ +++S + K+ + + + +S P S E
Sbjct: 1422 KRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSVSDAPVHITASGEPVPISEE 1477
Score = 38 (18.4 bits), Expect = 1.6e-49, Sum P(3) = 1.6e-49
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 1426 HRSPDHSDMVIGNVPGNTSED 1446
HRS DH + G++ + D
Sbjct: 1682 HRSRDHRSNLEGSIKDRSHSD 1702
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 596 (214.9 bits), Expect = 7.7e-53, Sum P(3) = 7.7e-53
Identities = 144/363 (39%), Positives = 204/363 (56%)
Query: 26 LLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPX 85
+L T ++ K D+ L + W +I +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 584 ILLTTYEILLK-DKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 642
Query: 86 XXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQ 145
F E FS W + FE + LH+
Sbjct: 643 QNSLKELWSLLH------FIMPEKFSSW--EDFEEEHGKGREYGYAS----------LHK 684
Query: 146 VLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRSVH- 202
L PF+LRR+K VE LP K+E+++R E SA QK K + N ++ SKG +
Sbjct: 685 ELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGF 744
Query: 203 -NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRV 261
N +MEL+ CNH YL + ++ + + L ++R GKL +LD+LL +L+ +RV
Sbjct: 745 LNIMMELKKCCNHCYLIK-PPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV 803
Query: 262 LFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAG 321
L FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FLLS RAG
Sbjct: 804 LIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG 863
Query: 322 GVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAE 381
G+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE + A+
Sbjct: 864 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAK 923
Query: 382 HKL 384
K+
Sbjct: 924 KKM 926
Score = 187 (70.9 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 63/198 (31%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 581 KFNILLTTYEILLK--DKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 638
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S EDF + K E ++
Sbjct: 639 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------YASLHKELEPFLLR 692
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L GS G++ G
Sbjct: 693 RV----KKDVEKSLPAKVEQILRMEMSALQK----QYYKWILTRNYKALSKGSKGSTSG- 743
Query: 200 SVHNSVMELRNICNHPYL 217
N +MEL+ CNH YL
Sbjct: 744 -FLNIMMELKKCCNHCYL 760
Score = 64 (27.6 bits), Expect = 7.7e-53, Sum P(3) = 7.7e-53
Identities = 18/80 (22%), Positives = 36/80 (45%)
Query: 1398 KPENKTDGDSVEKLEDTV--DDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPL-ET 1454
K NK + K+++ + D E D D + + E S K+PL +T
Sbjct: 1331 KTRNKKNKMKASKIKEEIKSDSSPQPSEKSDEDDDEEDNKVNEIKSENKEKSKKIPLLDT 1390
Query: 1455 PLIMKSTEGP-SVSMKADDV 1473
P+ + +T P +S +++++
Sbjct: 1391 PVHITATSEPVPISEESEEL 1410
Score = 49 (22.3 bits), Expect = 2.9e-51, Sum P(3) = 2.9e-51
Identities = 24/86 (27%), Positives = 34/86 (39%)
Query: 1292 KHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTP 1351
K N+ ++ E+K + +P SE + E KV S N S TP
Sbjct: 1335 KKNKMKASKIKEEIKSDSSPQPSEKSDEDDDEEDNKVNEIKS-ENKE--KSKKIPLLDTP 1391
Query: 1352 AMETAPGFDIPIEKGVEQSGTEIDAK 1377
TA +PI E+S E+D K
Sbjct: 1392 VHITATSEPVPIS---EES-EELDQK 1413
Score = 46 (21.3 bits), Expect = 7.7e-53, Sum P(3) = 7.7e-53
Identities = 27/114 (23%), Positives = 46/114 (40%)
Query: 1895 SATKEEKIDGSLDKDPDSNLVV-LEDSKGSIGDQMDCCQSGVVVPE-NLSDFCQPSSSL- 1951
S +K K+D +D SNL L+DS+G D + + S++ SS
Sbjct: 1602 SDSKHRKLDDHRSRDHRSNLEGNLKDSRGH-SDHRSHSDHRIHSDHRSTSEYSHHKSSRD 1660
Query: 1952 ----APWEA--KIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEH 1999
+ W+ + GS + P+ +S GS+ + + S + PEH
Sbjct: 1661 YRYHSDWQMDHRASGSGPRSPLDQRSPY-GSRSPLGHRSP-FEHSSDHKSTPEH 1712
Score = 42 (19.8 bits), Expect = 6.5e-50, Sum P(3) = 6.5e-50
Identities = 28/98 (28%), Positives = 42/98 (42%)
Query: 1824 GSSLVLQDKASEAE-IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSH----SPVH 1878
G L+D +S E G R+ + V G + R +SGV + + +SH +P+H
Sbjct: 1171 GCIKALKDNSSGQERAGGRLGK--VKGPTFR-ISGV------QVNAKLVISHEEELAPLH 1221
Query: 1879 VVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV 1916
EE + TK D K+ DSNL+V
Sbjct: 1222 KSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLV 1259
Score = 40 (19.1 bits), Expect = 6.5e-50, Sum P(3) = 6.5e-50
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 2414 AEDKTENEIEEDPVVNSVAVEESKGSE 2440
+E E++ EED VN + E + S+
Sbjct: 1357 SEKSDEDDDEEDNKVNEIKSENKEKSK 1383
Score = 37 (18.1 bits), Expect = 2.5e-50, Sum P(3) = 2.5e-50
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 1426 HRSPDHSDMVIGNV 1439
HRS DH + GN+
Sbjct: 1612 HRSRDHRSNLEGNL 1625
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 594 (214.2 bits), Expect = 1.3e-52, Sum P(2) = 1.3e-52
Identities = 144/363 (39%), Positives = 203/363 (55%)
Query: 26 LLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPX 85
+L T ++ K D+ L + W +I +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 600 ILLTTYEILLK-DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 658
Query: 86 XXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQ 145
F E FS W + FE + LH+
Sbjct: 659 QNSLKELWSLLH------FIMPEKFSSW--EDFEEEHGKGREYGYAS----------LHK 700
Query: 146 VLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRSVH- 202
L PF+LRR+K VE LP K+E+++R E SA QK K + N ++ SKG +
Sbjct: 701 ELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGF 760
Query: 203 -NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRV 261
N +MEL+ CNH YL + + + + L ++R GKL +LD+LL +L+ +RV
Sbjct: 761 LNIMMELKKCCNHCYLIK-PPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV 819
Query: 262 LFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAG 321
L FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FLLS RAG
Sbjct: 820 LIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG 879
Query: 322 GVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAE 381
G+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE + A+
Sbjct: 880 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAK 939
Query: 382 HKL 384
K+
Sbjct: 940 KKM 942
Score = 187 (70.9 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 63/198 (31%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 597 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 654
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S EDF + K E ++
Sbjct: 655 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------YASLHKELEPFLLR 708
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L GS G++ G
Sbjct: 709 RV----KKDVEKSLPAKVEQILRMEMSALQK----QYYKWILTRNYKALSKGSKGSTSG- 759
Query: 200 SVHNSVMELRNICNHPYL 217
N +MEL+ CNH YL
Sbjct: 760 -FLNIMMELKKCCNHCYL 776
Score = 63 (27.2 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 35/156 (22%), Positives = 67/156 (42%)
Query: 1963 EKDPVSSQSVLE--GSKETVAEAGDQMDISIMPEK-LPEHLDIPASLATPEEKTEGSEKD 2019
+K+P + E +E E ++ D + EK E + A +EK EK
Sbjct: 1411 KKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRENKVKEAIQKEKDIKEEKL 1470
Query: 2020 PDSSFAAQE-DPKESVVEAGDQMGVSLGGATV-MEKSSEDLATPPLSLANE-----EEMI 2072
+S ++E K SV++A + ++ GG V + + SE+L S+ E + +
Sbjct: 1471 SESKSESKERSKKSSVLDA--PVHITAGGEPVPIAEESEELDQKTFSICKERMRPVKAAL 1528
Query: 2073 EGFDNDPTGISMA--VMDSKECAAEAADQM--CVSE 2104
+ D G+S + +++C + D + C+ E
Sbjct: 1529 KQLDRPERGLSEREQLEHTRQCLIKIGDHITECLKE 1564
Score = 56 (24.8 bits), Expect = 1.3e-52, Sum P(2) = 1.3e-52
Identities = 29/122 (23%), Positives = 49/122 (40%)
Query: 1877 VHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVV 1936
+ V E KS+ LPS S ++K + + K P+ + DS+ + D C
Sbjct: 1357 IKVKEEIKSDSSPLPSDKSDEDDDKDEITSVKHPNKKIKTERDSEEKT--EPDVCIKKE- 1413
Query: 1937 VPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKL 1996
PE + + + + +I +K + + E + V EA Q + I EKL
Sbjct: 1414 -PEEKRE-AKEKENKRELKREIKEKEDKKDIKEKDFKEKRENKVKEA-IQKEKDIKEEKL 1470
Query: 1997 PE 1998
E
Sbjct: 1471 SE 1472
Score = 56 (24.8 bits), Expect = 7.8e-51, Sum P(3) = 7.8e-51
Identities = 22/97 (22%), Positives = 44/97 (45%)
Query: 2290 DVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGP 2349
D++E+ + K KE+I + E K +++ S+ + V+ PV A G
Sbjct: 1441 DIKEKDFK--EKRENKVKEAIQKEKDIKEEKLSESKSESKERSKKSSVLDAPVHITAGGE 1498
Query: 2350 ASFLAAEEEKNE------CSDK-EPVGSSVSQIESKE 2379
+A E E+ + C ++ PV +++ Q++ E
Sbjct: 1499 PVPIAEESEELDQKTFSICKERMRPVKAALKQLDRPE 1535
Score = 52 (23.4 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 33/120 (27%), Positives = 49/120 (40%)
Query: 2261 EANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESK 2320
EA + A GG+ R+ + S V+EE I+ S P+ S+K DE
Sbjct: 1331 EAQRLSGA--GGSKRRKARAKKNKAMKSIKVKEE-IKSDSSPLPSDKS--------DEDD 1379
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAE-EEKNECSDKEPVGSSVSQIESKE 2379
D E++S + + EE P + E EEK E +KE +I+ KE
Sbjct: 1380 DKD-EITS-VKHPNKKIKTERDSEEKTEPDVCIKKEPEEKREAKEKENKRELKREIKEKE 1437
Score = 40 (19.1 bits), Expect = 6.1e-51, Sum P(2) = 6.1e-51
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1426 HRSPDHSDMVIGNVPGNTSED 1446
HRS DH + G++ T D
Sbjct: 1710 HRSRDHRSNLEGSLKDRTHSD 1730
Score = 40 (19.1 bits), Expect = 6.1e-51, Sum P(2) = 6.1e-51
Identities = 22/79 (27%), Positives = 33/79 (41%)
Query: 1736 ELVPRDFGVGRRDGDIEIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGAD 1795
++ +DF R + E E LS SK E +K VLD V + G +
Sbjct: 1441 DIKEKDFKEKRENKVKEAIQKEKDIKEEKLSESKSESKERSKKSSVLD--APVHITAGGE 1498
Query: 1796 NPEGGVIVPEHKSENMGEK 1814
P V + E +SE + +K
Sbjct: 1499 -P---VPIAE-ESEELDQK 1512
Score = 38 (18.4 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 1803 VPEHKSENMGEKDDISS 1819
+P KS+ +KD+I+S
Sbjct: 1370 LPSDKSDEDDDKDEITS 1386
Score = 38 (18.4 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 1876 PVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV 1916
P+H EE + TK D K+ DSNL++
Sbjct: 1233 PLHKSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNLLI 1273
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 371 (135.7 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 73/159 (45%), Positives = 106/159 (66%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL LD LL +LK+ HRVL +S MTR++D++E+Y+ ++++ Y+RLDG + +R ++
Sbjct: 1098 GKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMV 1157
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
F Q + F+FLLS RAGG+G+NL AADTVI +D+DWNP VD QA RAHR+GQ + V
Sbjct: 1158 ADF-QTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV 1216
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNT 400
V R T+EE++ A+ K + I+ G F +T
Sbjct: 1217 TVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDT 1255
Score = 297 (109.6 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 73/222 (32%), Positives = 122/222 (54%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V++T+Y+ ++ D +++W Y+++DE +K++S L +Q +RLLLTG
Sbjct: 620 FHVVITSYQLVVQ--DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTG 677
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F+S E+F++WF+K ES+ +N ++R
Sbjct: 678 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENK-------SAIDENQLSR 730
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVE-----ENL--GSIGN 195
LH +L+PF+LRR+K VENEL +KIE L+ C+ ++ QKLL + ++ E+L S+G+
Sbjct: 731 LHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGS 790
Query: 196 SKGR-----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH 232
++ S+ N VM+ R +CNHP L E +T P H
Sbjct: 791 TQQAQNTTSSLMNLVMQFRKVCNHPELF----ERQETWSPFH 828
Score = 45 (20.9 bits), Expect = 2.2e-52, Sum P(4) = 2.2e-52
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1932 QSGVVVPENLSDFCQPSSSLAPWEAKID 1959
Q+ +V P L+DF PSS+ +P + ++
Sbjct: 1490 QTSIVRPAGLADF-GPSSASSPLSSPLN 1516
Score = 45 (20.9 bits), Expect = 2.2e-52, Sum P(4) = 2.2e-52
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 1191 QSSDDKTCSVTPTVETPPPG--FNSPNENPGELTGTKNDASVRGDHTPVSGHTLASK 1245
+SS D V + P NSP G ++ T N S++ GH+ S+
Sbjct: 1372 ESSSDMLVIVDDPASSAPQSRATNSPASITGSVSDTVNGISIQEVPAAGRGHSARSR 1428
Score = 40 (19.1 bits), Expect = 7.3e-52, Sum P(4) = 7.3e-52
Identities = 25/99 (25%), Positives = 35/99 (35%)
Query: 696 SACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESL 755
SA PS P + +G +P LV+ DD S P + P S +
Sbjct: 1348 SAMPS-PFSEISISSELHTGS-IPPDESSSDMLVIV---DDPASSAPQSRATNSPASIT- 1401
Query: 756 NPSGGESTATDG-NVSSIPTAPVPDSV-SPSAVKGQSGT 792
G S +G ++ +P A S S KG T
Sbjct: 1402 ---GSVSDTVNGISIQEVPAAGRGHSARSRGRPKGSGST 1437
Score = 39 (18.8 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 768 NVSSIPTAPVPDSVSPSAVKGQSGTID--PSSAVAALNSELN 807
NVS +A P + S V+ +G D PSSA + L+S LN
Sbjct: 1478 NVSKGISASSP--LQTSIVR-PAGLADFGPSSASSPLSSPLN 1516
Score = 39 (18.8 bits), Expect = 9.3e-52, Sum P(4) = 9.3e-52
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1086 GEAPRRRGKKQGSG 1099
G + R RG+ +GSG
Sbjct: 1422 GHSARSRGRPKGSG 1435
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 398 (145.2 bits), Expect = 1.8e-52, Sum P(3) = 1.8e-52
Identities = 84/172 (48%), Positives = 113/172 (65%)
Query: 241 CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL 300
CGKL+ L LL +LKA HRVL F+ MTR+LDV+E +LT+ + YLRLDG T R AL
Sbjct: 2053 CGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQAL 2112
Query: 301 IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
+++FN D F F+LS R+GGVGVNL ADTV+ +D+DWNP +D QAQ R HRIGQ RD
Sbjct: 2113 MERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 2171
Query: 361 VLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESL 412
V + R + +TVEE + A K + + +I G F T+A +++ + L
Sbjct: 2172 VHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF---TTAYFKQQTIREL 2220
Score = 278 (102.9 bits), Expect = 1.8e-52, Sum P(3) = 1.8e-52
Identities = 63/198 (31%), Positives = 97/198 (48%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V +T+Y+ ++ H + W Y+I+DE IKN + L ++ S RLLLTG
Sbjct: 726 FHVCITSYKLVLQDHQA--FRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 783
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F S +F +WF+ P + S + ++ R
Sbjct: 784 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEG-------LVKR 836
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLL---MKRVEENLGSIGNSKGR 199
LH+VLRPF+LRR+K VE ++P+K E ++RC S Q+ L ++
Sbjct: 837 LHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFM 896
Query: 200 SVHNSVMELRNICNHPYL 217
SV N +M+LR +CNHP L
Sbjct: 897 SVINILMQLRKVCNHPNL 914
Score = 85 (35.0 bits), Expect = 7.5e-20, Sum P(7) = 7.5e-20
Identities = 45/184 (24%), Positives = 68/184 (36%)
Query: 624 SPVPVVLPAPSGTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQPTT 683
+P+PV+ P+P G V + T AS+S P +APSS T
Sbjct: 1615 APLPVLAPSP-GPTSVLASSQTSVPVLASSSTPGTPLASASSLGPAPA-AALAPSSAQTM 1672
Query: 684 AFVPV-----APGSQSASACPSTPMQPKGRGRRIQS---GEQVPRRRGKKIGLVLPAASD 735
PV +P S A P G Q+ G P+ L L AS
Sbjct: 1673 VPAPVPSPLPSPASTQTLALPPALASTLGGSSPSQTLSLGTGNPQSPFSAQTLSLTPASS 1732
Query: 736 DIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSI-PTAPVP-DSVSPSAVKGQSGTI 793
+P+P +T L PS S A ++ + P P P +++ + V + +
Sbjct: 1733 LVPAPA---QTLSLAPGPPLGPSQTLSLAPAPTLAPVSPMGPAPAHTLTLAPVSSSASLL 1789
Query: 794 DPSS 797
P+S
Sbjct: 1790 APAS 1793
Score = 76 (31.8 bits), Expect = 3.0e-52, Sum P(6) = 3.0e-52
Identities = 31/110 (28%), Positives = 50/110 (45%)
Query: 1961 SSEKDP-VSSQSVLEGSKETVAEAGDQMDISIMP--EKLP------EHLDIPASLATPEE 2011
SS P +++ SV G ++ V E + +S++P E++P L++P S A+ E
Sbjct: 2615 SSAPSPTLAAGSVPNGQEQEVPEPAEATILSVLPDGEEMPTCLSESNRLELPPSAASDEP 2674
Query: 2012 KTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATP 2061
E E D +S + S E ++ VS AT SS +TP
Sbjct: 2675 LPEPLETDKNSEELVEAQTPTSTPEKPQEL-VS-AEATAPSTSSSATSTP 2722
Score = 75 (31.5 bits), Expect = 1.7e-18, Sum P(7) = 1.7e-18
Identities = 92/397 (23%), Positives = 135/397 (34%)
Query: 626 VPVVLPAP---SGTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIA--PSSQ 680
+P+ P P SG + T ++A P A + +G+A PS
Sbjct: 1465 IPISAPLPVSASGPTLLTNVTPTLAPVVSAAPGPPSLAPVGASPSASALTLGLASTPSLS 1524
Query: 681 PTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSP 740
P+ A PG A P++ P G + + PA + P+
Sbjct: 1525 PSQA-----PGHPLLLA-PASSHVP-GLNSAVAPACSPVLVPASALANPFPATPNPAPAQ 1577
Query: 741 G----PDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVP---DSVSPSAVKGQSGTI 793
P P T Q + SL P TA + P AP+P S P++V S T
Sbjct: 1578 ASLLAPAP-TASQALATSLAPMVAPQTAILAPSPAPPLAPLPVLAPSPGPTSVLASSQTS 1636
Query: 794 DPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQAL 853
P V A +S T LA+A S +P Q L
Sbjct: 1637 VP---VLASSSTPGTPLASASSLGPAPAAALAPSSAQTMVPAPVPSPLPSP---ASTQTL 1690
Query: 854 GSPPISDVSAGPESKS--------NLQSENNSGGLRLSKSVSMGKQDALSQEL------- 898
PP + G S S N QS ++ L L+ + S+ A + L
Sbjct: 1691 ALPPALASTLGGSSPSQTLSLGTGNPQSPFSAQTLSLTPASSLVPAPAQTLSLAPGPPLG 1750
Query: 899 -SNKIQVQPCGVATSADVAGPDQKPAEQ-SVRVVQSNQPINLPATHDSSSQPSGSTPAQV 956
S + + P GP PA ++ V S+ + PA S Q +PAQV
Sbjct: 1751 PSQTLSLAPAPTLAPVSPMGP--APAHTLTLAPVSSSASLLAPA----SVQTLTLSPAQV 1804
Query: 957 PSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKA 993
P LG A+ T + ++ S L +S+ A
Sbjct: 1805 PVPTLGPAAAQTLALAPASTQSPASQASSLVVSSSGA 1841
Score = 71 (30.1 bits), Expect = 1.7e-18, Sum P(7) = 1.7e-18
Identities = 44/171 (25%), Positives = 68/171 (39%)
Query: 624 SPVPVVLPAPSGTVKVEKD---AMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQ 680
+PVP LP+P+ T + A T +S S +L AQ + + A S
Sbjct: 1675 APVPSPLPSPASTQTLALPPALASTLGGSSPSQTLSLGTGNPQSPFSAQTLSLTPASSLV 1734
Query: 681 PTTA-FVPVAPG-----SQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAAS 734
P A + +APG SQ+ S P+ + P + L+ PA+
Sbjct: 1735 PAPAQTLSLAPGPPLGPSQTLSLAPAPTLAPVSPMGPAPAHTLTLAPVSSSASLLAPASV 1794
Query: 735 DDIP-SPGPDPKTNEQP---QSESLNPSGGESTATDGN---VSSIPTAPVP 778
+ SP P P Q+ +L P+ +S A+ + VSS AP+P
Sbjct: 1795 QTLTLSPAQVPVPTLGPAAAQTLALAPASTQSPASQASSLVVSSSGAAPLP 1845
Score = 68 (29.0 bits), Expect = 3.3e-18, Sum P(7) = 3.3e-18
Identities = 63/270 (23%), Positives = 99/270 (36%)
Query: 738 PSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSG-----T 792
P+ GP P+ P L G S +S P P P +SP+ G S T
Sbjct: 1085 PNSGPLPQVLPSP----LGVLSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSNLLKPLT 1140
Query: 793 IDPSSA---VAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGK 849
+ P A AA + +T A + Q+R SG V G+
Sbjct: 1141 VPPGYAFPNAAATTTSTSTVTAPTTAVPAPASAPQRLILSPDMQAR-LPSGEVVSI--GQ 1197
Query: 850 RQALGSPPISDVSAGPESKSNLQSENNSGGLRLS--KSVSMGKQDALSQELSNKIQV--- 904
+L P++ S G Q + N L + + +++G+ L + + + +
Sbjct: 1198 LASLTQRPVA--STGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQ 1255
Query: 905 -----QPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSM 959
QP VA VA P P V V+ S+ P PA S P + QVP
Sbjct: 1256 HHLISQPAHVALIQAVA-PT--PGPTPVSVLPSSTPSTTPAP-TGLSLPLAAN--QVPPT 1309
Query: 960 DLGNVASDTKEVLSENSSSKGGVIPILALS 989
+ N K V+ + + + G+ P+ L+
Sbjct: 1310 MVNNTGV-VKIVVRQ--APRDGLTPVPPLA 1336
Score = 61 (26.5 bits), Expect = 7.0e-17, Sum P(8) = 7.0e-17
Identities = 23/72 (31%), Positives = 32/72 (44%)
Query: 738 PSPGPDPKTNEQPQSESLNPSGGE---STATDGNVSSIP----TAPVPDSVSPSAVKGQS 790
P+PGP P P S +PSG ++ G V P + P+P V PS + S
Sbjct: 1044 PTPGPTPPVLPAPLMVSASPSGPPLIPASRPPGPVLLPPLQPNSGPLPQ-VLPSPLGVLS 1102
Query: 791 GTIDPSSAVAAL 802
GT P + +L
Sbjct: 1103 GTSRPPTPTLSL 1114
Score = 60 (26.2 bits), Expect = 4.8e-17, Sum P(7) = 4.8e-17
Identities = 76/368 (20%), Positives = 121/368 (32%)
Query: 675 IAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAAS 734
+AP+ +P ++ +P + P G R + R K + P S
Sbjct: 1335 LAPAPRPPSSGLPAVLTPRPTLPPGRLPTPSLGTARAPIPTSTLVRPLLKLVHSPSPEVS 1394
Query: 735 DDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVS-P--SAVKGQSG 791
P P ++ P SL P S N S + +PV +VS P S++
Sbjct: 1395 ASAPGAAPLTISSPLPVPSSL-PGPASSPVPVPNSSPL-ASPVSSTVSVPVSSSLPISVS 1452
Query: 792 TIDPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQS---GGVTPRRRG 848
T PS A A L ++ L + + S G +P
Sbjct: 1453 TTLPSPASAPLTIPISAPLPVSASGPTLLTNVTPTLAPVVSAAPGPPSLAPVGASPSASA 1512
Query: 849 KRQALGSPPISDVSAGPESKSNLQ-SENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPC 907
L S P S P L + ++ GL + + + + L+N P
Sbjct: 1513 LTLGLASTPSLSPSQAPGHPLLLAPASSHVPGLNSAVAPACSPVLVPASALANPFPATPN 1572
Query: 908 GVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASD 967
A + P A Q++ S P+ P T + P+ P P L
Sbjct: 1573 PAPAQASLLAP-APTASQALAT--SLAPMVAPQTAILAPSPA---PPLAPLPVLAPSPGP 1626
Query: 968 TKEVLSENSSSKGGVIPILALSNMKAVERVNIQSF--EEKACTNASKSKATLPALDSITE 1025
T VL+ + +S +P+LA S+ + S A S ++ +PA
Sbjct: 1627 TS-VLASSQTS----VPVLASSSTPGTPLASASSLGPAPAAALAPSSAQTMVPAPVPSPL 1681
Query: 1026 PYTGSTNT 1033
P ST T
Sbjct: 1682 PSPASTQT 1689
Score = 59 (25.8 bits), Expect = 2.7e-51, Sum P(5) = 2.7e-51
Identities = 24/77 (31%), Positives = 32/77 (41%)
Query: 690 PGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQ 749
PG ++ P + PK R R++ G VP +K+ A PG +T Q
Sbjct: 3113 PGGLELTS-PVVSLAPKLRSTRLRPGSLVPPLETEKVPRKRAGAPVG-SGPGLAKRTRLQ 3170
Query: 750 PQSESLNPSGG--ESTA 764
P S L P G ES A
Sbjct: 3171 PPSP-LGPEGSVEESEA 3186
Score = 57 (25.1 bits), Expect = 2.9e-52, Sum P(4) = 2.9e-52
Identities = 47/252 (18%), Positives = 89/252 (35%)
Query: 673 VGIAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQ--VPRRRGKKIGLVL 730
+ + P V + P S+ + S+ P + +G++ VP I VL
Sbjct: 2588 ITLVPPKDLLPVAVEILPVSEKNLSLTSSAPSPTLAAGSVPNGQEQEVPEPAEATILSVL 2647
Query: 731 PAASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQS 790
P +++P+ + E P S + + E TD N + A P S +P K Q
Sbjct: 2648 PDG-EEMPTCLSESNRLELPPSAASDEPLPEPLETDKNSEELVEAQTPTS-TPE--KPQE 2703
Query: 791 GTIDPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKR 850
++A + +S +T ++ ++ +G R Q G R+
Sbjct: 2704 LVSAEATAPSTSSSATSTPEGSSPARPPRRRTSADVEIRGQGAGRPGQPPGPKVLRKLPG 2763
Query: 851 QALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVA 910
+ + ++ + S G S ++S S+ PC VA
Sbjct: 2764 RLVTVVEEKELVRRRRQQRGTASTLVPGVSETGTSPGSPSARSMSGPESSPPTSGPCEVA 2823
Query: 911 TSADVAGPDQKP 922
+ + + P Q+P
Sbjct: 2824 SPSTLPTPTQQP 2835
Score = 55 (24.4 bits), Expect = 1.6e-50, Sum P(6) = 1.6e-50
Identities = 35/139 (25%), Positives = 53/139 (38%)
Query: 1193 SDDKTCSVTPTVETPPPGFNSPNENPGELTGTK----NDASVRGDHTPVSGHTLASKTEA 1248
S C+ P TPPP P LT + SV PV+ L EA
Sbjct: 2506 SCSSACTPPPAC-TPPPAQTPPPAQTSLLTPSSPLLLGLPSVPMS-PPVTNLPLGLGPEA 2563
Query: 1249 -LKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDI-PI-EKHNEQSRNQNNPEV 1305
L + A +E +A +S + + +VP + P +I P+ EK+ + + +P +
Sbjct: 2564 ELCAQAMASTESLE-LAMASSETSPITLVPPKDLLPVAVEILPVSEKNLSLTSSAPSPTL 2622
Query: 1306 KGEETP--VSSEAPASTEA 1322
P E P EA
Sbjct: 2623 AAGSVPNGQEQEVPEPAEA 2641
Score = 54 (24.1 bits), Expect = 3.2e-16, Sum P(8) = 3.2e-16
Identities = 25/96 (26%), Positives = 39/96 (40%)
Query: 706 KGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTAT 765
+GR R ++ +P+ R + ++L A+ P P P PK + + L P + T
Sbjct: 960 EGRVSRYEADTFLPQYRLSR-RVLLEVAT--APDPPPRPKPVKMKVNRMLQPVPKQEGRT 1016
Query: 766 DGNVSS--IPTAPVPDSVSPSAVKGQSGTIDPSSAV 799
V+S P PVP P T P+ V
Sbjct: 1017 VVVVNSPRTPLGPVPVRPPPGPELSAQPTPGPTPPV 1052
Score = 53 (23.7 bits), Expect = 9.4e-17, Sum P(7) = 9.4e-17
Identities = 42/180 (23%), Positives = 63/180 (35%)
Query: 624 SPVPVVLPAPSGTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQPTT 683
+PVP + PAP +T + T LP +V +P
Sbjct: 1330 TPVPPLAPAPRPPSSGLPAVLTPRPTLPPGRLPTPSLGTARAPIPTSTLV------RPLL 1383
Query: 684 AFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPD 743
V SASA + P+ I S VP +P + P P
Sbjct: 1384 KLVHSPSPEVSASAPGAAPLT-------ISSPLPVPSSLPGPASSPVPVPNSS-PLASPV 1435
Query: 744 PKTNEQPQSESLNPSGGESTATDGNVS-SIP-TAPVPDSVS-PSAVKGQSGTIDPSSAVA 800
T P S SL S + + + +IP +AP+P S S P+ + + T+ P + A
Sbjct: 1436 SSTVSVPVSSSLPISVSTTLPSPASAPLTIPISAPLPVSASGPTLLTNVTPTLAPVVSAA 1495
Score = 52 (23.4 bits), Expect = 1.4e-50, Sum P(5) = 1.4e-50
Identities = 42/188 (22%), Positives = 60/188 (31%)
Query: 624 SPVPVVLPAPSGTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQ-PT 682
+P+PV + AP M S LP P +Q P
Sbjct: 2467 APIPVPISAPIPISAPNPVTMLPVHILPSPPLPSAQIPPSCSSACTPPPACTPPPAQTPP 2526
Query: 683 TAFVPV-APGSQSASACPSTPMQPKGRGRRIQSG---EQVPRRRGKKIGLVLPAASDDIP 738
A + P S PS PM P + G E + L L AS +
Sbjct: 2527 PAQTSLLTPSSPLLLGLPSVPMSPPVTNLPLGLGPEAELCAQAMASTESLELAMASSETS 2586
Query: 739 SPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSA 798
P + P + + P ++ N+S +AP P + S GQ + P A
Sbjct: 2587 PITLVPPKDLLPVAVEILP------VSEKNLSLTSSAPSPTLAAGSVPNGQEQEV-PEPA 2639
Query: 799 VAALNSEL 806
A + S L
Sbjct: 2640 EATILSVL 2647
Score = 51 (23.0 bits), Expect = 1.8e-50, Sum P(5) = 1.8e-50
Identities = 33/132 (25%), Positives = 52/132 (39%)
Query: 830 TKGQSRKTQSGGVTPRRRGKRQALGSPPISDV-SAGPESKS--NLQSENNSGGLRLSKSV 886
T T + G P G+ Q + P + + S P+ + SE+N RL
Sbjct: 2614 TSSAPSPTLAAGSVPN--GQEQEVPEPAEATILSVLPDGEEMPTCLSESN----RLELPP 2667
Query: 887 SMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSS- 945
S + L + L + V + P+ KP E +V + P+T S+
Sbjct: 2668 SAASDEPLPEPLETDKNSEEL-VEAQTPTSTPE-KPQE----LVSAEA--TAPSTSSSAT 2719
Query: 946 SQPSGSTPAQVP 957
S P GS+PA+ P
Sbjct: 2720 STPEGSSPARPP 2731
Score = 51 (23.0 bits), Expect = 7.8e-16, Sum P(8) = 7.8e-16
Identities = 22/109 (20%), Positives = 38/109 (34%)
Query: 671 VMVGIAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGL-V 729
V+ G + PT + P P S P + + G P
Sbjct: 1100 VLSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSNLLKPLTVPPGYAFPNAAATTTSTST 1159
Query: 730 LPAASDDIPSPGPDP-KTNEQPQSESLNPSGGESTATDGNVSSIPTAPV 777
+ A + +P+P P + P ++ PSG + G ++S+ PV
Sbjct: 1160 VTAPTTAVPAPASAPQRLILSPDMQARLPSG--EVVSIGQLASLTQRPV 1206
Score = 50 (22.7 bits), Expect = 5.3e-50, Sum P(6) = 5.3e-50
Identities = 39/182 (21%), Positives = 63/182 (34%)
Query: 1301 NNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSD--DKTCSVTPAMETAPG 1358
N P G E + ++A ASTE+ E ++ +S + L D + P E
Sbjct: 2554 NLPLGLGPEAELCAQAMASTESLELAMASSETSPITLVP-PKDLLPVAVEILPVSEKNLS 2612
Query: 1359 FDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLE---DTV 1415
+G+ + + + P P EA + + E T +LE
Sbjct: 2613 LTSSAPSPTLAAGSVPNGQEQ--EVPEPAEATILSVLPDGEEMPTCLSESNRLELPPSAA 2670
Query: 1416 DDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVAD 1475
D L E + + ++V P +T E P E L+ PS S A +
Sbjct: 2671 SDEPL-PEPLETDKNSEELVEAQTPTSTPEK----PQE--LVSAEATAPSTSSSATSTPE 2723
Query: 1476 HS 1477
S
Sbjct: 2724 GS 2725
Score = 50 (22.7 bits), Expect = 3.4e-16, Sum P(5) = 3.4e-16
Identities = 20/62 (32%), Positives = 26/62 (41%)
Query: 2322 PDAEVSSQTAIEGGGVVS--IPVPEEADGPASFLAAEEEKNECSDKEPVGSSVS-QIESK 2378
P EVS+ +S +PVP GPAS + N PV S+VS + S
Sbjct: 1389 PSPEVSASAPGAAPLTISSPLPVPSSLPGPAS--SPVPVPNSSPLASPVSSTVSVPVSSS 1446
Query: 2379 EP 2380
P
Sbjct: 1447 LP 1448
Score = 48 (22.0 bits), Expect = 4.7e-50, Sum P(5) = 4.7e-50
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVP 778
I SP + P++ L G S+ DGN+ S T P+P
Sbjct: 2942 ILSPVEKRRRGRPPKARDLPLPGTTSSPGDGNLES-RTQPLP 2982
Score = 47 (21.6 bits), Expect = 3.0e-52, Sum P(6) = 3.0e-52
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 947 QPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEE 1004
+PSGS+ P + VAS +L + I A + KA + + F E
Sbjct: 2227 EPSGSSVPSAPDDEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNE 2284
Score = 47 (21.6 bits), Expect = 4.7e-50, Sum P(5) = 4.7e-50
Identities = 39/172 (22%), Positives = 64/172 (37%)
Query: 621 ADKSPVPVVLPAPSGTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQHVMVGIAPSSQ 680
++ SP+ +V P V VE ++ ++ S ++S P Q V P
Sbjct: 2583 SETSPITLVPPKDLLPVAVEILPVSEKNLSLTSSAPSPTLAAGSVPNGQEQEV---PEPA 2639
Query: 681 PTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPR--RRGKKIGLVLPAASDDIP 738
T + V P + C S + + S E +P K ++ A + P
Sbjct: 2640 EAT-ILSVLPDGEEMPTCLSESNRLE-LPPSAASDEPLPEPLETDKNSEELVEAQT---P 2694
Query: 739 SPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSA-VKGQ 789
+ P+ K E +E+ PS S+AT S P P S ++GQ
Sbjct: 2695 TSTPE-KPQELVSAEATAPSTS-SSATSTPEGSSPARPPRRRTSADVEIRGQ 2744
Score = 47 (21.6 bits), Expect = 3.3e-18, Sum P(7) = 3.3e-18
Identities = 26/131 (19%), Positives = 51/131 (38%)
Query: 1437 GNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGSPINSGTECST 1496
G +P S +++ P+ T +++ P + + + S P +P+ T S
Sbjct: 1359 GRLP-TPSLGTARAPIPTSTLVR----PLLKLVHSPSPEVSASAP--GAAPL---TISSP 1408
Query: 1497 VSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKCPSDAIVNNLLE 1556
+ V + + + P S + P +S V S +P + P+ A + +
Sbjct: 1409 LPVPSSLPGPASSPVPVPNSSPLASPVSSTVSVPVSSSLPISVSTTLPSPASAPLTIPIS 1468
Query: 1557 TPLDIKSIGGP 1567
PL + S GP
Sbjct: 1469 APLPV-SASGP 1478
Score = 46 (21.3 bits), Expect = 2.3e-50, Sum P(5) = 2.3e-50
Identities = 35/143 (24%), Positives = 53/143 (37%)
Query: 2284 LPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVP 2343
L L+SS G S P G E+E A S PD E T + + +P
Sbjct: 2611 LSLTSSAPSPTLAAG-SVPNGQEQEVPEPAEATILSVLPDGE-EMPTCLSESNRLELPPS 2668
Query: 2344 EEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDG-AVALENTSE 2402
+D P E +KN S +E++ P + +P ++V A A +S
Sbjct: 2669 AASDEPLPE-PLETDKN----------SEELVEAQTPTSTPEKPQELVSAEATAPSTSSS 2717
Query: 2403 GMGGP--SPPLVIAEDKTENEIE 2423
P S P +T ++E
Sbjct: 2718 ATSTPEGSSPARPPRRRTSADVE 2740
Score = 46 (21.3 bits), Expect = 5.5e-17, Sum P(5) = 5.5e-17
Identities = 24/100 (24%), Positives = 36/100 (36%)
Query: 2316 LDESKGPDAEV-SSQTAIE---GGGVVSIPVPEEAD-GPASFLAAEEEKNECSDKEPVGS 2370
L S GP + + SSQT++ P+ + GPA A + PV S
Sbjct: 1620 LAPSPGPTSVLASSQTSVPVLASSSTPGTPLASASSLGPAPAAALAPSSAQTMVPAPVPS 1679
Query: 2371 SVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPP 2410
+ S + A + G+ + S G G P P
Sbjct: 1680 PLPSPASTQTLALPPALASTLGGSSPSQTLSLGTGNPQSP 1719
Score = 43 (20.2 bits), Expect = 1.8e-19, Sum P(7) = 1.8e-19
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1200 VTPTVETPPPGFNSPNENP 1218
V P VE PPP ++ + P
Sbjct: 1990 VMPPVEAPPPSLHACHPPP 2008
Score = 43 (20.2 bits), Expect = 7.0e-17, Sum P(8) = 7.0e-17
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 1206 TPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQ--AGRIENI 1263
T PPG+ PN T + ++V T V A + L P+ +A+ +G + +I
Sbjct: 1140 TVPPGYAFPNA----AATTTSTSTVTAPTTAVPAPASAPQRLILSPDMQARLPSGEVVSI 1195
Score = 43 (20.2 bits), Expect = 8.6e-16, Sum P(7) = 8.6e-16
Identities = 36/134 (26%), Positives = 51/134 (38%)
Query: 673 VGIAPSSQPTTAFVPVAPGSQ-SASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLP 731
V + PSS P+T P +A+ P T + G + + Q PR + + P
Sbjct: 1280 VSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVV--RQAPRDGLTPVPPLAP 1337
Query: 732 AASDDIPSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDS--VSP--SAVK 787
A PS G +P +L P G T + G AP+P S V P V
Sbjct: 1338 APRP--PSSGLPAVLTPRP---TL-PPGRLPTPSLGTAR----APIPTSTLVRPLLKLVH 1387
Query: 788 GQSGTIDPSSAVAA 801
S + S+ AA
Sbjct: 1388 SPSPEVSASAPGAA 1401
Score = 43 (20.2 bits), Expect = 6.3e-15, Sum P(6) = 6.3e-15
Identities = 34/157 (21%), Positives = 53/157 (33%)
Query: 2203 PCVQMDVRGDGIVPETVPEELGLPSS---PMVVXXXXXXXXXXXXPSASSIPRGESKGPD 2259
P ++ G P T+ L +PSS P P +S++ S
Sbjct: 1389 PSPEVSASAPGAAPLTISSPLPVPSSLPGPASSPVPVPNSSPLASPVSSTVSVPVSSSLP 1448
Query: 2260 AEANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDES 2319
+ + + + T+P LP+S+S V + SA P S
Sbjct: 1449 ISVSTTLPSPASAPL--TIPISAPLPVSASGPT------LLTNVTPTLAPVVSAAPGPPS 1500
Query: 2320 KGPDAEVSSQTAIEGGGVVSIPV--PEEADGPASFLA 2354
P S +A+ G + S P P +A G LA
Sbjct: 1501 LAPVGASPSASALTLG-LASTPSLSPSQAPGHPLLLA 1536
Score = 42 (19.8 bits), Expect = 1.8e-52, Sum P(3) = 1.8e-52
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 2365 KEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSE 2402
+EP GSSV E E A + +++ A+ E
Sbjct: 2226 EEPSGSSVPSAPDDEEETVASKQTHILEQALCRAEDEE 2263
Score = 42 (19.8 bits), Expect = 2.7e-51, Sum P(5) = 2.7e-51
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 472 PLPPLPSRL 480
PLPPLPS L
Sbjct: 2986 PLPPLPSLL 2994
Score = 42 (19.8 bits), Expect = 1.4e-50, Sum P(5) = 1.4e-50
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 1491 GTECSTVSVKTDVGNHPQNVEPTSAS-PERSGPQNSAVGFCDKSEIPS 1537
GT + V ++ G P + S S PE S P + S +P+
Sbjct: 2783 GTASTLVPGVSETGTSPGSPSARSMSGPESSPPTSGPCEVASPSTLPT 2830
Score = 42 (19.8 bits), Expect = 7.5e-20, Sum P(7) = 7.5e-20
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 622 DKSPVPVVLPAPSGTV 637
+ P+P VLP+P G +
Sbjct: 1086 NSGPLPQVLPSPLGVL 1101
Score = 42 (19.8 bits), Expect = 1.0e-17, Sum P(7) = 1.0e-17
Identities = 24/95 (25%), Positives = 36/95 (37%)
Query: 1429 PDHSDMVIGNVPGNTSEDSS--KMPLETPL-IMKSTEGPSVSMKADDVADHSRETPILSG 1485
P S + + N S SS +P+ + L I ST PS + A S P+ +
Sbjct: 1418 PASSPVPVPNSSPLASPVSSTVSVPVSSSLPISVSTTLPSPA-SAPLTIPISAPLPVSAS 1476
Query: 1486 SPINSGTECSTVSVKTDVGNHPQNVEPTSASPERS 1520
P T++ P ++ P ASP S
Sbjct: 1477 GPTLLTNVTPTLAPVVSAAPGPPSLAPVGASPSAS 1511
Score = 41 (19.5 bits), Expect = 3.5e-51, Sum P(5) = 3.5e-51
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 475 PLPSRLVTDDDLKALYEAMKIYDAPK 500
PLP L TD + + L EA P+
Sbjct: 2674 PLPEPLETDKNSEELVEAQTPTSTPE 2699
Score = 41 (19.5 bits), Expect = 3.1e-28, Sum P(6) = 3.1e-28
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 149 PFVLRRLKHKVENELPEKIERL 170
PF L L+ K + + E++ER+
Sbjct: 1894 PFYLDSLEEKRKRQRSERLERI 1915
Score = 41 (19.5 bits), Expect = 3.4e-16, Sum P(5) = 3.4e-16
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 1978 ETVAEAGDQMDISIMPEKLPEHLDIPASLATP 2009
+ VA +S++P P P L+ P
Sbjct: 1269 QAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLP 1300
Score = 40 (19.1 bits), Expect = 1.4e-16, Sum P(8) = 1.4e-16
Identities = 12/51 (23%), Positives = 20/51 (39%)
Query: 1083 PTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLR 1133
P AP+R +P G V +L +Q + GSK ++ +
Sbjct: 1168 PAPASAPQRLILSPDMQARLPSGEVVSIGQLASLTQRPVASTGGSKPLTFQ 1218
Score = 39 (18.8 bits), Expect = 2.9e-52, Sum P(4) = 2.9e-52
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 2251 PRGESKGPDAEANNIIDAEGGGNMRQTV-PQDLGLPLSSSD 2290
P G + +AEA+ + EG G R+ P+ LG + D
Sbjct: 3177 PEGSVEESEAEASGE-EEEGDGTPRRRPGPRRLGGATTQGD 3216
Score = 39 (18.8 bits), Expect = 6.5e-18, Sum P(7) = 6.5e-18
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 675 IAPSSQPTTAFVPVAPGSQSASACPSTP 702
+ P+S P +P G S ++ P TP
Sbjct: 1083 LQPNSGPLPQVLPSPLGVLSGTSRPPTP 1110
Score = 38 (18.4 bits), Expect = 3.0e-52, Sum P(6) = 3.0e-52
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1803 VPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDE 1844
+P+ + E G D++S GS + + G R+ E
Sbjct: 2367 LPQEEEEGPGAGDEVSCGTGGGSHRRSKKAKAPERPGTRVSE 2408
Score = 38 (18.4 bits), Expect = 3.5e-51, Sum P(5) = 3.5e-51
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 834 SRKTQSGGVTPRRR-GKRQALGSPPISD 860
S + + G TPRRR G R+ G+ D
Sbjct: 3189 SGEEEEGDGTPRRRPGPRRLGGATTQGD 3216
Score = 38 (18.4 bits), Expect = 3.9e-49, Sum P(5) = 3.9e-49
Identities = 22/95 (23%), Positives = 34/95 (35%)
Query: 687 PVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIP--SPGPDP 744
P G S+ +P R R++ + R R + +V+ DD+ GP
Sbjct: 3056 PQGQGESEGSSSDEDGSRPLTRLARLRLEAEGVRGRKSEGSMVVAVIQDDLDLADSGPGG 3115
Query: 745 KTNEQPQSESLNPSGGESTATDGN-VSSIPTAPVP 778
P SL P + G+ V + T VP
Sbjct: 3116 LELTSPVV-SLAPKLRSTRLRPGSLVPPLETEKVP 3149
Score = 38 (18.4 bits), Expect = 5.6e-19, Sum P(7) = 5.6e-19
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 1236 PVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
P S + AS+ +L + A + + P K P L + PP
Sbjct: 1821 PASTQSPASQASSLVVSSSGAAPLPVTMVSRLPVSKDEPETLTLRSGPP 1869
Score = 38 (18.4 bits), Expect = 9.4e-17, Sum P(7) = 9.4e-17
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 1429 PDHSDMV--IGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDV 1473
P H ++ + PG T S +P TP + G S+ + A+ V
Sbjct: 1262 PAHVALIQAVAPTPGPTPV--SVLPSSTPSTTPAPTGLSLPLAANQV 1306
Score = 37 (18.1 bits), Expect = 3.2e-51, Sum P(6) = 3.2e-51
Identities = 7/45 (15%), Positives = 21/45 (46%)
Query: 890 KQDALSQELSNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQSNQ 934
+++ ++ + ++ ++ C D+ Q AEQ + + N+
Sbjct: 2240 EEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNE 2284
Score = 37 (18.1 bits), Expect = 7.0e-17, Sum P(8) = 7.0e-17
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 1255 AQAGRIENIANS-SPDDKS-LPM-VPNLETAPPGFDIPIEKHNEQSRNQNNPEV 1305
A I+ +A + P S LP P+ AP G +P+ + NN V
Sbjct: 1263 AHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGV 1316
Score = 37 (18.1 bits), Expect = 4.3e-16, Sum P(5) = 4.3e-16
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 2340 IPVPEEADGPASFLAAEEEKNE--CSDKEPVGSSVSQIESKEPE-AKAFEP 2387
+PV + GP S LA+ + S P G+ ++ S P A A P
Sbjct: 1617 LPVLAPSPGPTSVLASSQTSVPVLASSSTP-GTPLASASSLGPAPAAALAP 1666
Score = 37 (18.1 bits), Expect = 1.3e-15, Sum P(6) = 1.3e-15
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 608 TPPSKXXXXXXXXADKSPVPVVLPAPSGTVKVEKDAMTGQS 648
+P S+ + +P+PV + + K E + +T +S
Sbjct: 1826 SPASQASSLVVSSSGAAPLPVTMVSRLPVSKDEPETLTLRS 1866
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 373 (136.4 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 76/156 (48%), Positives = 101/156 (64%)
Query: 241 CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL 300
CGKL++LDRLL L + HRVL F+ MT++LD++E +L +RYLRLDG T R L
Sbjct: 990 CGKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNIHGHRYLRLDGATKIEQRQIL 1049
Query: 301 IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
++FN D +F+LS R+GG+G+NL ADTVI +D+DWNPQ+D QAQ R+HRIGQ RD
Sbjct: 1050 TERFNNDDK-IPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRD 1108
Query: 361 VLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFF 396
V + R + TVE + A K + I G F
Sbjct: 1109 VHIYRLISEYTVESNMLRRANQKRMLDKIVIQGGEF 1144
Score = 273 (101.2 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 70/210 (33%), Positives = 106/210 (50%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
++V +T+Y+ ++ H +P K +W Y+I+DE H IKN + L ++ + HRLLLTG
Sbjct: 547 WHVCITSYQLVLQDH-QPFRRK-KWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTG 604
Query: 83 TPXXXXXXXXXX-------XXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXX 135
TP F + +DF WF+KP + + D
Sbjct: 605 TPLQNNLVELWSLLYFLMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNT 664
Query: 136 XXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMK------RVEEN 189
+ +LH+VLRP++LRRLK +VE ++P K E +V C+ S Q+ L R E
Sbjct: 665 ----VAKLHRVLRPYLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFINRARTREI 720
Query: 190 LGSIGNSKGRSVHNSVMELRNICNHPYLSQ 219
L S GN S+ N +M+LR +CNHP L +
Sbjct: 721 LAS-GNFM--SIINCLMQLRKVCNHPNLHE 747
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 420 (152.9 bits), Expect = 4.7e-52, Sum P(3) = 4.7e-52
Identities = 91/188 (48%), Positives = 120/188 (63%)
Query: 201 VHNSVMELRNICNHPYLSQLHAEEV--DTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATD 258
+ N +M L+ CNH YL + + D I + +V GK +LDR+LP+LK
Sbjct: 576 LQNILMLLKRCCNHAYLIEYPLDPTTGDFKIDEQ----LVEASGKFLILDRMLPELKKRG 631
Query: 259 HRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSI 318
H+VL FS MT +LD++ DY + Y Y RLDG S DR + KF+ D F+FLLS
Sbjct: 632 HKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSS-DPEVFLFLLST 690
Query: 319 RAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV-- 376
RAGG+G+NL +ADTVIIFD+DWNPQ DLQAQ R HRIGQ + V+V R T T++E++
Sbjct: 691 RAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVHRLITANTIDEKILE 750
Query: 377 RASAEHKL 384
RASA+ KL
Sbjct: 751 RASAKRKL 758
Score = 229 (85.7 bits), Expect = 4.7e-52, Sum P(3) = 4.7e-52
Identities = 58/179 (32%), Positives = 89/179 (49%)
Query: 25 VLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTP 84
V++T++E M DR L + W+Y+I+DEGHRIKN +C+L +LK + ++LLLTGTP
Sbjct: 338 VVVTSFEIAMR--DRKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKMLPTDNKLLLTGTP 395
Query: 85 XXXXXXXXXXXXXXXXXXIFNSSEDFSQWFN-KPFESNGDNSPDXXXXXXXXXXXIINRL 143
+F+ + F WF+ S+ +N I++ L
Sbjct: 396 LQNNLSELWSLLNFLLPDVFDDLKSFESWFDISTITSDAEN-----IVANEREQNILHML 450
Query: 144 HQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLL-MKRVEENLGSI-GNSKGRS 200
H +L PF+LRRLK V E+P K E +V + Q+ M V + + + G K S
Sbjct: 451 HLILTPFLLRRLKSDVTLEVPPKKEIVVYAPLTNKQEAFYMAIVNKTIAKLLGQEKDES 509
Score = 37 (18.1 bits), Expect = 4.7e-52, Sum P(3) = 4.7e-52
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 461 KLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMKIYDAPKTGV 503
+L++ DG + ++++D DL+ L + + D K V
Sbjct: 789 ELLKSRDYDGA-VKGTKGKVISDKDLQILLDRSDLMDQAKKRV 830
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 372 (136.0 bits), Expect = 7.9e-52, Sum P(3) = 7.9e-52
Identities = 76/156 (48%), Positives = 98/156 (62%)
Query: 241 CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL 300
CGKL+ LD+LL LKA HR L F+ MT++LDV+E +L +RYLRLDG T R L
Sbjct: 1372 CGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNIHGHRYLRLDGTTKVEQRQIL 1431
Query: 301 IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
D+FN D+ F+LS R+GG+G+NL ADTVI +D DWNP +D Q Q R HRIGQ RD
Sbjct: 1432 TDRFNN-DNRILAFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRD 1490
Query: 361 VLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFF 396
V + RF + T+E + A K + + I G F
Sbjct: 1491 VHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGEF 1526
Score = 271 (100.5 bits), Expect = 7.9e-52, Sum P(3) = 7.9e-52
Identities = 73/223 (32%), Positives = 110/223 (49%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
+NVL+T+Y+ ++ D+ L + WHY+I+DE H IKN + L +++ RLLLTG
Sbjct: 925 WNVLITSYQLVLQ--DQQVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRARLLLTG 982
Query: 83 TPXXXXXXXXXXX------XXXXXXXI--FNSSEDFSQWFNKPFESNGDNSPDXXXXXXX 134
TP I F +FS+WF +P E ++ +
Sbjct: 983 TPLQNNLTELWSLLFFLMPTDGDEAGIEGFADLRNFSEWFRRPVEQILEHGRETMDDEAK 1042
Query: 135 XXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLL----MKRVE--E 188
++ +LH VLRP++LRRLK VE ++P K E +V C S Q+ L M R + E
Sbjct: 1043 Q---VVTKLHTVLRPYILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLYDGFMSRAQTKE 1099
Query: 189 NLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPK 231
L S GN S+ N +M+LR +CNHP L + +P+
Sbjct: 1100 TLAS-GNYL--SIINCLMQLRKVCNHPDLFETRPISTSFAMPR 1139
Score = 59 (25.8 bits), Expect = 7.9e-52, Sum P(3) = 7.9e-52
Identities = 37/166 (22%), Positives = 61/166 (36%)
Query: 1307 GEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSD-DKTCSVTPAMETAPGFDIPIEK 1365
G + + EA A+ + + +VTNTS A+ D D + +E A D
Sbjct: 1541 GNDEALKDEASAAMDRVLENRVTNTSRVFEQAEDKEDIDAAKNAQKELEHADDGDFDDRA 1600
Query: 1366 GVEQSG-TEIDAKVKWKN-------TPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDD 1417
SG T A TPLP EA + + ++ E EDT D
Sbjct: 1601 NANASGVTAASASASGAGQTPTQAGTPLPDEA----------QQSLNANNAEVAEDTADS 1650
Query: 1418 HSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEG 1463
V + D ++ + N ++ +P++ + KS +G
Sbjct: 1651 DPSVGHI-------DDYLLRFMEWNMKDEPLVLPVDKSM-KKSKKG 1688
Score = 42 (19.8 bits), Expect = 4.7e-50, Sum P(3) = 4.7e-50
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1289 PIEKHNEQSRNQNNPEVKGEET 1310
P+ +QS N NN EV E+T
Sbjct: 1627 PLPDEAQQSLNANNAEV-AEDT 1647
Score = 42 (19.8 bits), Expect = 5.3e-28, Sum P(3) = 5.3e-28
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 187 EENLGSIGNSKGRSVHNS-VMELRNICNHPYLSQLHAEEV 225
EE IGN G+ H + LR P LS H V
Sbjct: 232 EETADDIGND-GQDEHGQRIQRLRIKVKKPALSIQHPSHV 270
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 594 (214.2 bits), Expect = 8.4e-52, Sum P(3) = 8.4e-52
Identities = 144/363 (39%), Positives = 203/363 (55%)
Query: 26 LLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPX 85
+L T ++ K D+ L + W +I +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 586 ILLTTYEILLK-DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 644
Query: 86 XXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQ 145
F E FS W + FE + LH+
Sbjct: 645 QNSLKELWSLLH------FIMPEKFSSW--EDFEEEHGKGREYGYAS----------LHK 686
Query: 146 VLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRSVH- 202
L PF+LRR+K VE LP K+E+++R E SA QK K + N ++ SKG +
Sbjct: 687 ELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGF 746
Query: 203 -NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRV 261
N +MEL+ CNH YL + + + + L ++R GKL +LD+LL +L+ +RV
Sbjct: 747 LNIMMELKKCCNHCYLIK-PPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV 805
Query: 262 LFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAG 321
L FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FLLS RAG
Sbjct: 806 LIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG 865
Query: 322 GVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAE 381
G+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE + A+
Sbjct: 866 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAK 925
Query: 382 HKL 384
K+
Sbjct: 926 KKM 928
Score = 187 (70.9 bits), Expect = 9.3e-09, Sum P(3) = 9.3e-09
Identities = 63/198 (31%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 583 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 640
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S EDF + K E ++
Sbjct: 641 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------YASLHKELEPFLLR 694
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L GS G++ G
Sbjct: 695 RV----KKDVEKSLPAKVEQILRMEMSALQK----QYYKWILTRNYKALSKGSKGSTSG- 745
Query: 200 SVHNSVMELRNICNHPYL 217
N +MEL+ CNH YL
Sbjct: 746 -FLNIMMELKKCCNHCYL 762
Score = 63 (27.2 bits), Expect = 8.4e-52, Sum P(3) = 8.4e-52
Identities = 68/301 (22%), Positives = 118/301 (39%)
Query: 1824 GSSLVLQDKASEAE-IGDRIDEPQVDGFSPRSMSGV-VD-ELVDEAGDHMGVSHSPVHVV 1880
G L+D +S E G R+ + V G + R +SGV V+ +LV D + P+H
Sbjct: 1173 GCVKALKDSSSGTERAGGRLGK--VKGPTFR-ISGVQVNAKLVIAHEDEL----IPLHKS 1225
Query: 1881 EREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV--LEDSKGS---IGDQMDCCQSGV 1935
EE ++ TK D K+ DSNL++ E GS I D +
Sbjct: 1226 IPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHK 1285
Query: 1936 VVPENLSDFCQPSS--SLAPWEAKI-DGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIM 1992
++P++ Q + A + K+ K GSK A + +
Sbjct: 1286 ILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKREAQRLCGAGGSKRRKTRAKKSKAMKSI 1345
Query: 1993 PEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVME 2052
K+ E + +S E+ E +K DS +++ K+SVV + G +
Sbjct: 1346 --KVKEEIKSDSSPLPSEKSDEDDDKLNDSKPESKDRSKKSVVSDAPVHITASGEPVPIA 1403
Query: 2053 KSSEDLATPPLSLANE-----EEMIEGFDNDPTGISMA--VMDSKECAAEAADQM--CVS 2103
+ SE+L S+ E + ++ D G+S + +++C + D + C+
Sbjct: 1404 EESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLK 1463
Query: 2104 E 2104
E
Sbjct: 1464 E 1464
Score = 39 (18.8 bits), Expect = 8.4e-52, Sum P(3) = 8.4e-52
Identities = 13/64 (20%), Positives = 29/64 (45%)
Query: 1752 EIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSENM 1811
E E GP LS +++++ A+ + ++L P ++ I+PE + +
Sbjct: 998 ETHENEPGP----LSVGDELLSQFKVANFSNMDEDDIELEPERNSKNWEEIIPEEQRRRL 1053
Query: 1812 GEKD 1815
E++
Sbjct: 1054 EEEE 1057
Score = 37 (18.1 bits), Expect = 4.4e-49, Sum P(3) = 4.4e-49
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 2012 KTEGSEKDPDSSFAAQEDPKE 2032
K S K P SSF+ +D +E
Sbjct: 1568 KKSDSRKRPYSSFSNGKDHRE 1588
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 592 (213.5 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 152/389 (39%), Positives = 217/389 (55%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNAD-LKHYQSSHRLLL 80
K + L+TT+E +++ D L KI W +IDE HR+KN +CKL + L ++ HR+LL
Sbjct: 1308 KIDALITTFETVVS--DVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLL 1365
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TGTP F++S F + F G D +
Sbjct: 1366 TGTPLQNNIDELFSLLNFLHPQQFDNSATFLEQF-------GSCQTDDQ----------V 1408
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI--GNSK 197
+L ++L+P +LRRLK VE L K E ++ + S QK + + E N + G S
Sbjct: 1409 QKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILERNFSHLCKGTS- 1467
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEV---DTLI--P---KHYLP--PIVRLCGKLEML 247
S+ N +MELR CNHP+L AEE D + P + L +++ GK+ ++
Sbjct: 1468 APSLMNVMMELRKCCNHPFLIN-GAEEAIMNDFRLAHPDWDEETLAHKALIQASGKVVLI 1526
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
++LLPKL+ H+VL FS M ++LD++E++L Y + R+DG+ G R A ID+F+++
Sbjct: 1527 EKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKE 1586
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+S F+FLL RAGG+G+NL AADTVIIFD+DWNPQ DLQAQAR HRIGQK+ V V R
Sbjct: 1587 NSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLI 1646
Query: 368 TVQTVEEQVRASAEHKLGVAN---QSITA 393
T T E ++ A KLG+ QS TA
Sbjct: 1647 TSNTYEREMFDKASLKLGLDKAVLQSTTA 1675
Score = 66 (28.3 bits), Expect = 4.3e-51, Sum P(3) = 4.3e-51
Identities = 75/325 (23%), Positives = 116/325 (35%)
Query: 676 APSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVPRRRGK---KIGLVLPA 732
A SS+PT A P+A A+ PSTP K S + P KIG L
Sbjct: 2620 AASSRPTPAATPLAV----ATPKPSTPKVEKSSAT--PSAPETPSASATCNIKIGESLQF 2673
Query: 733 ASDDIPSPGPDPKTNEQPQSESLNPSGGESTA-TDGNVSSIPTAPVPDSVSPSAVKGQSG 791
DD+ S + KT E + S P E +A D N A S S
Sbjct: 2674 --DDMISVF-NRKTGEL-LAASKWPKATELSAWLDANPDYNVHANSALFAHLSLGGAHSD 2729
Query: 792 TI-DPSSAVAALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKR 850
I D + AV A S +T + Q Q+++T S TP R
Sbjct: 2730 RIGDATPAVTA--SVPSTPTPSTSASAANAQLMALALAQQVQQAQQTPS---TPTSSKSR 2784
Query: 851 QALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQE-LSNKIQVQPCGV 909
A + + A S+ + ++ L++ + +Q A Q L +
Sbjct: 2785 SATAAAQAAAAQAAA-SQQDAITKQQLEMLQMQMMLQQYQQAAALQSMLYGGYGMPTTST 2843
Query: 910 ATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGST--PAQVPSMDLGNVASD 967
A S+ A + ++ P S+S PS S AQ PS + + +S
Sbjct: 2844 AASSSSTANVASMAAMAAAAQAASTPTTSKQASASTSTPSTSAVASAQTPSTSVPSTSSQ 2903
Query: 968 TKEVLSENSSSKGGVIPILALSNMK 992
+ +++S + P+L + M+
Sbjct: 2904 AAAAAASSANSGEDINPLLLTALMQ 2928
Score = 63 (27.2 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 30/121 (24%), Positives = 50/121 (41%)
Query: 839 SGGVTPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQEL 898
SGG ++QAL ++ + AG + + S G S+S + Q A +Q
Sbjct: 2359 SGGQN-MTAAQQQALNQM-LTMLIAGAVQQQQQAQPSTSKGASSSQSSAQANQAAQAQAA 2416
Query: 899 SNKIQVQPCGVATSADVAGPDQKPAEQSVRVVQ-----SNQPINLPATHDSSSQPSGSTP 953
+ + + A SA + D + Q +V++ S P L A +SS STP
Sbjct: 2417 A--VALAQVAAAASASTSSADAQAVAQQQQVLEALLAMSMNPAALAALTGTSSSTGTSTP 2474
Query: 954 A 954
+
Sbjct: 2475 S 2475
Score = 59 (25.8 bits), Expect = 3.4e-51, Sum P(3) = 3.4e-51
Identities = 35/146 (23%), Positives = 54/146 (36%)
Query: 877 SGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPD-QKPAEQSVRVVQSNQP 935
SGG ++++ +Q AL+Q L+ I G A P K A S Q+NQ
Sbjct: 2359 SGG----QNMTAAQQQALNQMLTMLI----AGAVQQQQQAQPSTSKGASSSQSSAQANQA 2410
Query: 936 INLPATHDSSSQPSGSTPAQVPSMDLGNVASDTK--EVLSENSSSKGGVIPILALSNMKA 993
A + +Q + + A S D VA + E L S + + + S+
Sbjct: 2411 AQAQAAAVALAQVAAAASASTSSADAQAVAQQQQVLEALLAMSMNPAALAALTGTSSSTG 2470
Query: 994 VERVNIQSFEEKACTNASKSKATLPA 1019
+ + A S S AT A
Sbjct: 2471 TSTPSAPKKSKPAPQKESTSSATAAA 2496
Score = 54 (24.1 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 37/155 (23%), Positives = 55/155 (35%)
Query: 693 QSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQ- 751
Q A PST Q+ Q + + + L AA+ + D + Q Q
Sbjct: 2386 QQQQAQPSTSKGASSSQSSAQAN-QAAQAQAAAVALAQVAAAASASTSSADAQAVAQQQQ 2444
Query: 752 ------SESLNPSG-GESTATDGNV-SSIPTAPVPDSVSPSAVKGQSGTIDPSSAVAALN 803
+ S+NP+ T T + +S P+AP +P S T +A AA +
Sbjct: 2445 VLEALLAMSMNPAALAALTGTSSSTGTSTPSAPKKSKPAPQKESTSSAT----AAAAAAS 2500
Query: 804 SELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQ 838
++ LA A Q QS KTQ
Sbjct: 2501 AQAAA-LAAAQQQQQQAQQAQQAAQQA--QSAKTQ 2532
Score = 50 (22.7 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 30/110 (27%), Positives = 44/110 (40%)
Query: 1284 PGFDIPIEKHNEQSRNQNN----PEVKGEE---TPVSSEAPASTEAFEQEKVTNTSSFVN 1336
P + I I NE S N P K TP ++ +T KV +S+ +
Sbjct: 2593 PEWSIDIPLFNEMSGNGTGSGAAPSSKAASSRPTPAATPLAVATPKPSTPKVEKSSATPS 2652
Query: 1337 LADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVKW-KNTPL 1385
+ S TC++ E+ FD I ++G E+ A KW K T L
Sbjct: 2653 APETPSASATCNIKIG-ESLQ-FDDMISVFNRKTG-ELLAASKWPKATEL 2699
Score = 47 (21.6 bits), Expect = 6.7e-49, Sum P(3) = 6.7e-49
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 675 IAPSSQPTTAFVPVAPGSQSASACPSTPMQPKGRGRRIQSGEQVP 719
I ++ TA VP P ++++ + + +++Q +Q P
Sbjct: 2731 IGDATPAVTASVPSTPTPSTSASAANAQLMALALAQQVQQAQQTP 2775
Score = 46 (21.3 bits), Expect = 3.4e-51, Sum P(3) = 3.4e-51
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 1437 GNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSGS 1486
G P + + S P TPL + + + + ++ + ETP S +
Sbjct: 2613 GAAPSSKAASSRPTPAATPLAVATPKPSTPKVEKSSATPSAPETPSASAT 2662
Score = 42 (19.8 bits), Expect = 4.3e-51, Sum P(3) = 4.3e-51
Identities = 13/58 (22%), Positives = 21/58 (36%)
Query: 650 SASASLPXXXXXXXXXXXAQHVMVGI-APSSQPTTAFVPVAPGSQSASACPSTPMQPK 706
+A+AS Q V+ + A S P S + ++ PS P + K
Sbjct: 2424 AAAASASTSSADAQAVAQQQQVLEALLAMSMNPAALAALTGTSSSTGTSTPSAPKKSK 2481
Score = 40 (19.1 bits), Expect = 1.4e-50, Sum P(3) = 1.4e-50
Identities = 10/61 (16%), Positives = 28/61 (45%)
Query: 1483 LSGSPINSGTECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEV 1542
L+G+ ++GT + K+ ++ +A+ + Q +A+ + + + +A+
Sbjct: 2462 LTGTSSSTGTSTPSAPKKSKPAPQKESTSSATAAAAAASAQAAALAAAQQQQQQAQQAQQ 2521
Query: 1543 A 1543
A
Sbjct: 2522 A 2522
Score = 40 (19.1 bits), Expect = 6.7e-49, Sum P(3) = 6.7e-49
Identities = 13/62 (20%), Positives = 27/62 (43%)
Query: 744 PKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGT-IDPSSAVAAL 802
P T++Q + + PS + +S+P+ + + +A SG I+P A +
Sbjct: 2869 PTTSKQASASTSTPSTSAVASAQTPSTSVPSTS-SQAAAAAASSANSGEDINPLLLTALM 2927
Query: 803 NS 804
+
Sbjct: 2928 QN 2929
Score = 38 (18.4 bits), Expect = 2.3e-50, Sum P(3) = 2.3e-50
Identities = 13/49 (26%), Positives = 17/49 (34%)
Query: 1082 TPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQHSQNKSRDS-FGSKT 1129
TP + S P P SA + K+ + Q S F KT
Sbjct: 2636 TPKPSTPKVEKSSATPSAPETPSASATCNIKIGESLQFDDMISVFNRKT 2684
>UNIPROTKB|F1NP27 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
ArrayExpress:F1NP27 Uniprot:F1NP27
Length = 1803
Score = 523 (189.2 bits), Expect = 1.7e-51, Sum P(4) = 1.7e-51
Identities = 113/246 (45%), Positives = 159/246 (64%)
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRS 200
LH+ L PF+LRR+K VE LP K+E+++R E SA QK K + N ++ SKG +
Sbjct: 678 LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGST 737
Query: 201 VH--NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATD 258
N +MEL+ CNH YL + ++ + + L ++R GKL +LD+LL +L+
Sbjct: 738 SGFLNIMMELKKCCNHCYLIK-PPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERG 796
Query: 259 HRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSI 318
+RVL FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FLLS
Sbjct: 797 NRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLST 856
Query: 319 RAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRA 378
RAGG+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE +
Sbjct: 857 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILE 916
Query: 379 SAEHKL 384
A+ K+
Sbjct: 917 RAKKKM 922
Score = 104 (41.7 bits), Expect = 1.7e-51, Sum P(4) = 1.7e-51
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKN 60
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN
Sbjct: 581 KFNILLTTYEILLK--DKSFLGGLNWAFIGVDEAHRLKN 617
Score = 75 (31.5 bits), Expect = 1.7e-51, Sum P(4) = 1.7e-51
Identities = 41/184 (22%), Positives = 77/184 (41%)
Query: 1296 QSRNQNNP----EVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTP 1351
++RN+ N ++K E SS P+ + ++ N V++ L KT
Sbjct: 1327 KTRNKKNKMKASKIKEEIKSDSSPQPSEKSDEDDDEEDNKDEIVSVKHLHKKIKT---EK 1383
Query: 1352 AMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKL 1411
E P DI I+K E+ + K K L E K E K D +++
Sbjct: 1384 ENEEKPEPDIGIKKEAEEKR---ETKEKENKRELKRE---------KKE-KEDKKELKEK 1430
Query: 1412 EDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPL-ETPLIMKSTEGP-SVSMK 1469
++ + VKE + + + + + E S K+PL +TP+ + +T P +S +
Sbjct: 1431 DNKEKRENKVKESTQKEKEVKEEKVNEIKSENKEKSKKIPLLDTPVHITATSEPVPISEE 1490
Query: 1470 ADDV 1473
++++
Sbjct: 1491 SEEL 1494
Score = 52 (23.4 bits), Expect = 4.2e-49, Sum P(4) = 4.2e-49
Identities = 22/78 (28%), Positives = 34/78 (43%)
Query: 1292 KHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTP 1351
K N+ ++ E+K + +P SE S E ++E N V++ L KT
Sbjct: 1331 KKNKMKASKIKEEIKSDSSPQPSEK--SDEDDDEED--NKDEIVSVKHLHKKIKT---EK 1383
Query: 1352 AMETAPGFDIPIEKGVEQ 1369
E P DI I+K E+
Sbjct: 1384 ENEEKPEPDIGIKKEAEE 1401
Score = 51 (23.0 bits), Expect = 5.3e-49, Sum P(4) = 5.3e-49
Identities = 23/136 (16%), Positives = 61/136 (44%)
Query: 449 KQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD--------LKALYEAMKIYDAPK 500
K R ++ K+ + +D P P S D++ +K L++ +K +
Sbjct: 1327 KTRNKKNKMKASKIKEEIKSDSSPQPSEKSDEDDDEEDNKDEIVSVKHLHKKIKTEKENE 1386
Query: 501 TGVSPNVGVKRKGEHLGALDTQHYGRG-KRAREVRSYEEQWTEEEFEKMCQAESSDSPKL 559
P++G+K++ E + R KR ++ + +++ E++ ++ + + +S +
Sbjct: 1387 EKPEPDIGIKKEAEEKRETKEKENKRELKREKKEKEDKKELKEKDNKEKRENKVKESTQK 1446
Query: 560 KEEGLEKSLPTVVSSS 575
++E E+ + + S +
Sbjct: 1447 EKEVKEEKVNEIKSEN 1462
Score = 47 (21.6 bits), Expect = 2.0e-46, Sum P(5) = 2.0e-46
Identities = 60/258 (23%), Positives = 98/258 (37%)
Query: 1824 GSSLVLQDKASEAE-IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSH----SPVH 1878
G L+D +S E G R+ + V G + R +SGV + + +SH +P+H
Sbjct: 1167 GCIKALKDNSSGQERAGGRLGK--VKGPTFR-ISGV------QVNAKLVISHEEELAPLH 1217
Query: 1879 VVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV--LEDSKGS---IGDQMDCCQS 1933
EE + TK D K+ DSNL+V E GS I D +
Sbjct: 1218 KSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLVGIYEYGYGSWEMIKMDPDLSLT 1277
Query: 1934 GVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSV-LEGSKETVAEAGDQMDISIM 1992
++P++ D + L + KD ++ L G+ + +
Sbjct: 1278 QKILPDD-PDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLAGAGNSKRRKTRNKKNKMK 1336
Query: 1993 PEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVME 2052
K+ E + +S P EK S++D D +ED K+ +V L E
Sbjct: 1337 ASKIKEEIKSDSS-PQPSEK---SDEDDD-----EEDNKDEIVSVKH-----LHKKIKTE 1382
Query: 2053 KSSEDLATPPLSLANEEE 2070
K +E+ P + + E E
Sbjct: 1383 KENEEKPEPDIGIKKEAE 1400
Score = 46 (21.3 bits), Expect = 1.7e-51, Sum P(4) = 1.7e-51
Identities = 27/114 (23%), Positives = 46/114 (40%)
Query: 1895 SATKEEKIDGSLDKDPDSNLVV-LEDSKGSIGDQMDCCQSGVVVPE-NLSDFCQPSSSL- 1951
S +K K+D +D SNL L+DS+G D + + S++ SS
Sbjct: 1686 SDSKHRKLDDHRSRDHRSNLEGNLKDSRGH-SDHRSHSDHRIHSDHRSTSEYSHHKSSRD 1744
Query: 1952 ----APWEA--KIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEH 1999
+ W+ + GS + P+ +S GS+ + + S + PEH
Sbjct: 1745 YRYHSDWQMDHRASGSGPRSPLDQRSPY-GSRSPLGHRSP-FEHSSDHKSTPEH 1796
Score = 45 (20.9 bits), Expect = 2.2e-48, Sum P(4) = 2.2e-48
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 528 KRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPAVYSTE 583
KR +V+ ++ E + EK+ + +S + K K+ L + + ++S P S E
Sbjct: 1435 KRENKVKESTQKEKEVKEEKVNEIKSENKEKSKKIPLLDTPVHITATSEPVPISEE 1490
Score = 37 (18.1 bits), Expect = 3.6e-48, Sum P(4) = 3.6e-48
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 1426 HRSPDHSDMVIGNV 1439
HRS DH + GN+
Sbjct: 1696 HRSRDHRSNLEGNL 1709
Score = 37 (18.1 bits), Expect = 6.1e-47, Sum P(5) = 6.1e-47
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 2171 ETVQEEEKTELSCEKQ 2186
ET ++E K EL EK+
Sbjct: 1404 ETKEKENKRELKREKK 1419
Score = 37 (18.1 bits), Expect = 6.1e-47, Sum P(5) = 6.1e-47
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 2364 DKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAEDKTE 2419
+KE V++I+S+ E P+ +D V + TSE P+ I+E+ E
Sbjct: 1447 EKEVKEEKVNEIKSENKEKSKKIPL--LDTPVHITATSE-------PVPISEESEE 1493
Score = 37 (18.1 bits), Expect = 1.3e-46, Sum P(4) = 1.3e-46
Identities = 21/85 (24%), Positives = 30/85 (35%)
Query: 1955 EAKIDGSSEKDPVSSQSV-LEGSKETVAEAGDQMDISIMPEKLPEHLDIP--ASLATPEE 2011
E K D S + S + E +K+ + + I EK E P EE
Sbjct: 1343 EIKSDSSPQPSEKSDEDDDEEDNKDEIVSV-KHLHKKIKTEKENEEKPEPDIGIKKEAEE 1401
Query: 2012 KTEGSEKDPDSSFAAQEDPKESVVE 2036
K E EK+ ++ KE E
Sbjct: 1402 KRETKEKENKRELKREKKEKEDKKE 1426
>UNIPROTKB|F1N8K8 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
Length = 1804
Score = 523 (189.2 bits), Expect = 1.7e-51, Sum P(4) = 1.7e-51
Identities = 113/246 (45%), Positives = 159/246 (64%)
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRS 200
LH+ L PF+LRR+K VE LP K+E+++R E SA QK K + N ++ SKG +
Sbjct: 678 LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGST 737
Query: 201 VH--NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATD 258
N +MEL+ CNH YL + ++ + + L ++R GKL +LD+LL +L+
Sbjct: 738 SGFLNIMMELKKCCNHCYLIK-PPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERG 796
Query: 259 HRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSI 318
+RVL FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FLLS
Sbjct: 797 NRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLST 856
Query: 319 RAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRA 378
RAGG+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE +
Sbjct: 857 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILE 916
Query: 379 SAEHKL 384
A+ K+
Sbjct: 917 RAKKKM 922
Score = 104 (41.7 bits), Expect = 1.7e-51, Sum P(4) = 1.7e-51
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKN 60
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN
Sbjct: 581 KFNILLTTYEILLK--DKSFLGGLNWAFIGVDEAHRLKN 617
Score = 75 (31.5 bits), Expect = 1.7e-51, Sum P(4) = 1.7e-51
Identities = 41/184 (22%), Positives = 77/184 (41%)
Query: 1296 QSRNQNNP----EVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTP 1351
++RN+ N ++K E SS P+ + ++ N V++ L KT
Sbjct: 1328 KTRNKKNKMKASKIKEEIKSDSSPQPSEKSDEDDDEEDNKDEIVSVKHLHKKIKT---EK 1384
Query: 1352 AMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKL 1411
E P DI I+K E+ + K K L E K E K D +++
Sbjct: 1385 ENEEKPEPDIGIKKEAEEKR---ETKEKENKRELKRE---------KKE-KEDKKELKEK 1431
Query: 1412 EDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPL-ETPLIMKSTEGP-SVSMK 1469
++ + VKE + + + + + E S K+PL +TP+ + +T P +S +
Sbjct: 1432 DNKEKRENKVKESTQKEKEVKEEKVNEIKSENKEKSKKIPLLDTPVHITATSEPVPISEE 1491
Query: 1470 ADDV 1473
++++
Sbjct: 1492 SEEL 1495
Score = 52 (23.4 bits), Expect = 4.2e-49, Sum P(4) = 4.2e-49
Identities = 22/78 (28%), Positives = 34/78 (43%)
Query: 1292 KHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTP 1351
K N+ ++ E+K + +P SE S E ++E N V++ L KT
Sbjct: 1332 KKNKMKASKIKEEIKSDSSPQPSEK--SDEDDDEED--NKDEIVSVKHLHKKIKT---EK 1384
Query: 1352 AMETAPGFDIPIEKGVEQ 1369
E P DI I+K E+
Sbjct: 1385 ENEEKPEPDIGIKKEAEE 1402
Score = 51 (23.0 bits), Expect = 5.4e-49, Sum P(4) = 5.4e-49
Identities = 23/136 (16%), Positives = 61/136 (44%)
Query: 449 KQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD--------LKALYEAMKIYDAPK 500
K R ++ K+ + +D P P S D++ +K L++ +K +
Sbjct: 1328 KTRNKKNKMKASKIKEEIKSDSSPQPSEKSDEDDDEEDNKDEIVSVKHLHKKIKTEKENE 1387
Query: 501 TGVSPNVGVKRKGEHLGALDTQHYGRG-KRAREVRSYEEQWTEEEFEKMCQAESSDSPKL 559
P++G+K++ E + R KR ++ + +++ E++ ++ + + +S +
Sbjct: 1388 EKPEPDIGIKKEAEEKRETKEKENKRELKREKKEKEDKKELKEKDNKEKRENKVKESTQK 1447
Query: 560 KEEGLEKSLPTVVSSS 575
++E E+ + + S +
Sbjct: 1448 EKEVKEEKVNEIKSEN 1463
Score = 47 (21.6 bits), Expect = 2.0e-46, Sum P(5) = 2.0e-46
Identities = 60/258 (23%), Positives = 98/258 (37%)
Query: 1824 GSSLVLQDKASEAE-IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSH----SPVH 1878
G L+D +S E G R+ + V G + R +SGV + + +SH +P+H
Sbjct: 1168 GCIKALKDNSSGQERAGGRLGK--VKGPTFR-ISGV------QVNAKLVISHEEELAPLH 1218
Query: 1879 VVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV--LEDSKGS---IGDQMDCCQS 1933
EE + TK D K+ DSNL+V E GS I D +
Sbjct: 1219 KSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLVGIYEYGYGSWEMIKMDPDLSLT 1278
Query: 1934 GVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSV-LEGSKETVAEAGDQMDISIM 1992
++P++ D + L + KD ++ L G+ + +
Sbjct: 1279 QKILPDD-PDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLAGAGNSKRRKTRNKKNKMK 1337
Query: 1993 PEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVME 2052
K+ E + +S P EK S++D D +ED K+ +V L E
Sbjct: 1338 ASKIKEEIKSDSS-PQPSEK---SDEDDD-----EEDNKDEIVSVKH-----LHKKIKTE 1383
Query: 2053 KSSEDLATPPLSLANEEE 2070
K +E+ P + + E E
Sbjct: 1384 KENEEKPEPDIGIKKEAE 1401
Score = 46 (21.3 bits), Expect = 1.7e-51, Sum P(4) = 1.7e-51
Identities = 27/114 (23%), Positives = 46/114 (40%)
Query: 1895 SATKEEKIDGSLDKDPDSNLVV-LEDSKGSIGDQMDCCQSGVVVPE-NLSDFCQPSSSL- 1951
S +K K+D +D SNL L+DS+G D + + S++ SS
Sbjct: 1687 SDSKHRKLDDHRSRDHRSNLEGNLKDSRGH-SDHRSHSDHRIHSDHRSTSEYSHHKSSRD 1745
Query: 1952 ----APWEA--KIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEH 1999
+ W+ + GS + P+ +S GS+ + + S + PEH
Sbjct: 1746 YRYHSDWQMDHRASGSGPRSPLDQRSPY-GSRSPLGHRSP-FEHSSDHKSTPEH 1797
Score = 45 (20.9 bits), Expect = 2.2e-48, Sum P(4) = 2.2e-48
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 528 KRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPAVYSTE 583
KR +V+ ++ E + EK+ + +S + K K+ L + + ++S P S E
Sbjct: 1436 KRENKVKESTQKEKEVKEEKVNEIKSENKEKSKKIPLLDTPVHITATSEPVPISEE 1491
Score = 37 (18.1 bits), Expect = 3.6e-48, Sum P(4) = 3.6e-48
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 1426 HRSPDHSDMVIGNV 1439
HRS DH + GN+
Sbjct: 1697 HRSRDHRSNLEGNL 1710
Score = 37 (18.1 bits), Expect = 6.1e-47, Sum P(5) = 6.1e-47
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 2171 ETVQEEEKTELSCEKQ 2186
ET ++E K EL EK+
Sbjct: 1405 ETKEKENKRELKREKK 1420
Score = 37 (18.1 bits), Expect = 6.1e-47, Sum P(5) = 6.1e-47
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 2364 DKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAEDKTE 2419
+KE V++I+S+ E P+ +D V + TSE P+ I+E+ E
Sbjct: 1448 EKEVKEEKVNEIKSENKEKSKKIPL--LDTPVHITATSE-------PVPISEESEE 1494
Score = 37 (18.1 bits), Expect = 1.3e-46, Sum P(4) = 1.3e-46
Identities = 21/85 (24%), Positives = 30/85 (35%)
Query: 1955 EAKIDGSSEKDPVSSQSV-LEGSKETVAEAGDQMDISIMPEKLPEHLDIP--ASLATPEE 2011
E K D S + S + E +K+ + + I EK E P EE
Sbjct: 1344 EIKSDSSPQPSEKSDEDDDEEDNKDEIVSV-KHLHKKIKTEKENEEKPEPDIGIKKEAEE 1402
Query: 2012 KTEGSEKDPDSSFAAQEDPKESVVE 2036
K E EK+ ++ KE E
Sbjct: 1403 KRETKEKENKRELKREKKEKEDKKE 1427
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 372 (136.0 bits), Expect = 1.9e-51, Sum P(4) = 1.9e-51
Identities = 73/159 (45%), Positives = 106/159 (66%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL LD LL +LK+ HRVL +S MTR++D++E+Y+ ++++ Y+RLDG + +R ++
Sbjct: 1105 GKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMV 1164
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
F Q + F+FLLS RAGG+G+NL AADTVI +D+DWNP VD QA RAHR+GQ + V
Sbjct: 1165 ADF-QNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV 1223
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNT 400
V R T+EE++ A+ K + I+ G F +T
Sbjct: 1224 TVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDT 1262
Score = 297 (109.6 bits), Expect = 1.9e-51, Sum P(4) = 1.9e-51
Identities = 73/222 (32%), Positives = 122/222 (54%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V++T+Y+ ++ D +++W Y+++DE +K++S L +Q +RLLLTG
Sbjct: 627 FHVVITSYQLVVQ--DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTG 684
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F+S E+F++WF+K ES+ +N ++R
Sbjct: 685 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENK-------SAIDENQLSR 737
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVE-----ENL--GSIGN 195
LH +L+PF+LRR+K VENEL +KIE L+ C+ ++ QKLL + ++ E+L S+G+
Sbjct: 738 LHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGS 797
Query: 196 SKGR-----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH 232
++ S+ N VM+ R +CNHP L E +T P H
Sbjct: 798 TQQAQTTTSSLMNLVMQFRKVCNHPELF----ERQETWSPFH 835
Score = 45 (20.9 bits), Expect = 5.7e-51, Sum P(5) = 5.7e-51
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 1191 QSSDDKTCSVTPTVETPPPG--FNSPNENPGELTGTKNDASVRGDHTPVSGHTLASK 1245
+SS D V + P NSP G ++ T N S++ GH+ S+
Sbjct: 1379 ESSSDMLVIVDDPASSAPQSRATNSPASITGSVSDTVNGISIQEMPAAGRGHSARSR 1435
Score = 42 (19.8 bits), Expect = 1.9e-51, Sum P(4) = 1.9e-51
Identities = 32/129 (24%), Positives = 44/129 (34%)
Query: 635 GTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQH---VMVGIAPSSQPTTAFVPVAPG 691
G K T S +A A A + V GI+ SS T+ V A
Sbjct: 1447 GAGKGRSRKSTAGSAAAMAGAKAGAAAASAAAYAAYGYNVSKGISASSPLQTSLVRPAGL 1506
Query: 692 SQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQ 751
+ + S+P+ + G VP G L L + S PD +Q
Sbjct: 1507 ADFGPSSASSPLSSP-----LSKGNNVP---GTPKSLHLTS------SLAPDSLVRKQ-- 1550
Query: 752 SESLNPSGG 760
+ NPSGG
Sbjct: 1551 GKGTNPSGG 1559
Score = 42 (19.8 bits), Expect = 5.7e-51, Sum P(5) = 5.7e-51
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 1932 QSGVVVPENLSDFCQPSSSLAP 1953
Q+ +V P L+DF PSS+ +P
Sbjct: 1497 QTSLVRPAGLADF-GPSSASSP 1517
Score = 39 (18.8 bits), Expect = 2.4e-50, Sum P(5) = 2.4e-50
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1086 GEAPRRRGKKQGSG 1099
G + R RG+ +GSG
Sbjct: 1429 GHSARSRGRPKGSG 1442
Score = 38 (18.4 bits), Expect = 1.9e-51, Sum P(4) = 1.9e-51
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 519 LDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLE 565
LD + + R R+ +++ T E+ + E K KE+ L+
Sbjct: 1273 LDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELD 1319
Score = 37 (18.1 bits), Expect = 7.3e-51, Sum P(5) = 7.3e-51
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 528 KRAREV--RSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSS 574
KR +E R E + E++ + + E K ++EG+ +P V S+
Sbjct: 1289 KRQQEETNRVKERKRKREKYAEKKKKEDELDGKRRKEGVNLVIPFVPSA 1337
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 372 (136.0 bits), Expect = 2.0e-51, Sum P(4) = 2.0e-51
Identities = 73/159 (45%), Positives = 106/159 (66%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL LD LL +LK+ HRVL +S MTR++D++E+Y+ ++++ Y+RLDG + +R ++
Sbjct: 1111 GKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMV 1170
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
F Q + F+FLLS RAGG+G+NL AADTVI +D+DWNP VD QA RAHR+GQ + V
Sbjct: 1171 ADF-QNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV 1229
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNT 400
V R T+EE++ A+ K + I+ G F +T
Sbjct: 1230 TVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDT 1268
Score = 297 (109.6 bits), Expect = 2.0e-51, Sum P(4) = 2.0e-51
Identities = 73/222 (32%), Positives = 122/222 (54%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V++T+Y+ ++ D +++W Y+++DE +K++S L +Q +RLLLTG
Sbjct: 633 FHVVITSYQLVVQ--DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTG 690
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F+S E+F++WF+K ES+ +N ++R
Sbjct: 691 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENK-------SAIDENQLSR 743
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVE-----ENL--GSIGN 195
LH +L+PF+LRR+K VENEL +KIE L+ C+ ++ QKLL + ++ E+L S+G+
Sbjct: 744 LHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGS 803
Query: 196 SKGR-----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH 232
++ S+ N VM+ R +CNHP L E +T P H
Sbjct: 804 TQQAQTTTSSLMNLVMQFRKVCNHPELF----ERQETWSPFH 841
Score = 45 (20.9 bits), Expect = 5.9e-51, Sum P(5) = 5.9e-51
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 1191 QSSDDKTCSVTPTVETPPPG--FNSPNENPGELTGTKNDASVRGDHTPVSGHTLASK 1245
+SS D V + P NSP G ++ T N S++ GH+ S+
Sbjct: 1385 ESSSDMLVIVDDPASSAPQSRATNSPASITGSVSDTVNGISIQEMPAAGRGHSARSR 1441
Score = 42 (19.8 bits), Expect = 2.0e-51, Sum P(4) = 2.0e-51
Identities = 32/129 (24%), Positives = 44/129 (34%)
Query: 635 GTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQH---VMVGIAPSSQPTTAFVPVAPG 691
G K T S +A A A + V GI+ SS T+ V A
Sbjct: 1453 GAGKGRSRKSTAGSAAAMAGAKAGAAAASAAAYAAYGYNVSKGISASSPLQTSLVRPAGL 1512
Query: 692 SQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQ 751
+ + S+P+ + G VP G L L + S PD +Q
Sbjct: 1513 ADFGPSSASSPLSSP-----LSKGNNVP---GTPKSLHLTS------SLAPDSLVRKQ-- 1556
Query: 752 SESLNPSGG 760
+ NPSGG
Sbjct: 1557 GKGTNPSGG 1565
Score = 42 (19.8 bits), Expect = 5.9e-51, Sum P(5) = 5.9e-51
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 1932 QSGVVVPENLSDFCQPSSSLAP 1953
Q+ +V P L+DF PSS+ +P
Sbjct: 1503 QTSLVRPAGLADF-GPSSASSP 1523
Score = 39 (18.8 bits), Expect = 2.4e-50, Sum P(5) = 2.4e-50
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1086 GEAPRRRGKKQGSG 1099
G + R RG+ +GSG
Sbjct: 1435 GHSARSRGRPKGSG 1448
Score = 38 (18.4 bits), Expect = 2.0e-51, Sum P(4) = 2.0e-51
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 528 KRAREV--RSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSS 574
KR +E R E + E++ + + E K ++EG+ +P V S+
Sbjct: 1295 KRQQEETNRVKERKRKREKYAEKKKKEDELDGKRRKEGINLVIPFVPSA 1343
Score = 38 (18.4 bits), Expect = 5.9e-51, Sum P(5) = 5.9e-51
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 519 LDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLE 565
LD + + R R+ +++ T E+ + E K KE+ L+
Sbjct: 1279 LDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELD 1325
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 372 (136.0 bits), Expect = 2.4e-51, Sum P(4) = 2.4e-51
Identities = 73/159 (45%), Positives = 106/159 (66%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL LD LL +LK+ HRVL +S MTR++D++E+Y+ ++++ Y+RLDG + +R ++
Sbjct: 1101 GKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMV 1160
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
F Q + F+FLLS RAGG+G+NL AADTVI +D+DWNP VD QA RAHR+GQ + V
Sbjct: 1161 ADF-QNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV 1219
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNT 400
V R T+EE++ A+ K + I+ G F +T
Sbjct: 1220 TVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDT 1258
Score = 297 (109.6 bits), Expect = 2.4e-51, Sum P(4) = 2.4e-51
Identities = 73/222 (32%), Positives = 122/222 (54%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V++T+Y+ ++ D +++W Y+++DE +K++S L +Q +RLLLTG
Sbjct: 624 FHVVITSYQLVVQ--DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTG 681
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F+S E+F++WF+K ES+ +N ++R
Sbjct: 682 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENK-------SAIDENQLSR 734
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVE-----ENL--GSIGN 195
LH +L+PF+LRR+K VENEL +KIE L+ C+ ++ QKLL + ++ E+L S+G+
Sbjct: 735 LHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGS 794
Query: 196 SKGR-----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH 232
++ S+ N VM+ R +CNHP L E +T P H
Sbjct: 795 TQQAQNTTSSLMNLVMQFRKVCNHPELF----ERQETWSPFH 832
Score = 45 (20.9 bits), Expect = 5.6e-51, Sum P(5) = 5.6e-51
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 1191 QSSDDKTCSVTPTVETPPPG--FNSPNENPGELTGTKNDASVRGDHTPVSGHTLASK 1245
+SS D V + P NSP G ++ T N S++ GH+ S+
Sbjct: 1375 ESSSDMLVIVDDPASSAPQSRATNSPASITGSVSDTVNGISIQEMPAAGRGHSARSR 1431
Score = 42 (19.8 bits), Expect = 5.6e-51, Sum P(5) = 5.6e-51
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 1932 QSGVVVPENLSDFCQPSSSLAP 1953
Q+ +V P L+DF PSS+ +P
Sbjct: 1493 QTSLVRPAGLADF-GPSSASSP 1513
Score = 41 (19.5 bits), Expect = 2.4e-51, Sum P(4) = 2.4e-51
Identities = 31/129 (24%), Positives = 44/129 (34%)
Query: 635 GTVKVEKDAMTGQSTSASASLPXXXXXXXXXXXAQH---VMVGIAPSSQPTTAFVPVAPG 691
G K T S +A A A + V GI+ SS T+ V A
Sbjct: 1443 GAGKGRSRKSTAGSAAAMAGAKAGAAAASAAAYAAYGYNVSKGISASSPLQTSLVRPAGL 1502
Query: 692 SQSASACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQ 751
+ + S+P+ + G VP G L + + S PD +Q
Sbjct: 1503 ADFGPSSASSPLSSP-----LSKGNNVP---GNPKNLHMTS------SLAPDSLVRKQ-- 1546
Query: 752 SESLNPSGG 760
+ NPSGG
Sbjct: 1547 GKGTNPSGG 1555
Score = 39 (18.8 bits), Expect = 2.3e-50, Sum P(5) = 2.3e-50
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1086 GEAPRRRGKKQGSG 1099
G + R RG+ +GSG
Sbjct: 1425 GHSARSRGRPKGSG 1438
Score = 38 (18.4 bits), Expect = 2.4e-51, Sum P(4) = 2.4e-51
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 519 LDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLE 565
LD + + R R+ +++ T E+ + E K KE+ L+
Sbjct: 1269 LDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELD 1315
Score = 37 (18.1 bits), Expect = 7.1e-51, Sum P(5) = 7.1e-51
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 528 KRAREV--RSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSS 574
KR +E R E + E++ + + E K ++EG+ +P V S+
Sbjct: 1285 KRQQEETNRVKERKRKREKYAEKKKKEDELDGKRRKEGVNLVIPFVPSA 1333
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 371 (135.7 bits), Expect = 2.9e-51, Sum P(5) = 2.9e-51
Identities = 73/159 (45%), Positives = 106/159 (66%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL LD LL +LK+ HRVL +S MTR++D++E+Y+ ++++ Y+RLDG + +R ++
Sbjct: 1111 GKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMV 1170
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
F Q + F+FLLS RAGG+G+NL AADTVI +D+DWNP VD QA RAHR+GQ + V
Sbjct: 1171 ADF-QTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV 1229
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNT 400
V R T+EE++ A+ K + I+ G F +T
Sbjct: 1230 TVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDT 1268
Score = 297 (109.6 bits), Expect = 2.9e-51, Sum P(5) = 2.9e-51
Identities = 73/222 (32%), Positives = 122/222 (54%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V++T+Y+ ++ D +++W Y+++DE +K++S L +Q +RLLLTG
Sbjct: 633 FHVVITSYQLVVQ--DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTG 690
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F+S E+F++WF+K ES+ +N ++R
Sbjct: 691 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENK-------SAIDENQLSR 743
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVE-----ENL--GSIGN 195
LH +L+PF+LRR+K VENEL +KIE L+ C+ ++ QKLL + ++ E+L S+G+
Sbjct: 744 LHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGS 803
Query: 196 SKGR-----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH 232
++ S+ N VM+ R +CNHP L E +T P H
Sbjct: 804 TQQAQTTTSSLMNLVMQFRKVCNHPELF----ERQETWSPFH 841
Score = 46 (21.3 bits), Expect = 2.9e-51, Sum P(5) = 2.9e-51
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 1191 QSSDDKTCSVTPTVETPPPG--FNSPNENPGELTGTKNDASVRGDHTPVSGHTLASK 1245
+SS D V + P NSP G ++ T N S++ GH+ S+
Sbjct: 1385 ESSSDMLVIVDDPASSAPQSRATNSPASMTGSVSDTVNGISIQEMPAAGRGHSARSR 1441
Score = 45 (20.9 bits), Expect = 2.9e-51, Sum P(5) = 2.9e-51
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 1932 QSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSV 1972
Q+ +V P L+DF PSS+ +P + + G P + +S+
Sbjct: 1503 QTSLVRPAGLADF-GPSSASSPLSSPL-GKGNNLPGTPKSL 1541
Score = 39 (18.8 bits), Expect = 1.5e-50, Sum P(5) = 1.5e-50
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1086 GEAPRRRGKKQGSG 1099
G + R RG+ +GSG
Sbjct: 1435 GHSARSRGRPKGSG 1448
Score = 38 (18.4 bits), Expect = 2.9e-51, Sum P(5) = 2.9e-51
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 519 LDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLE 565
LD + + R R+ +++ T E+ + E K KE+ L+
Sbjct: 1279 LDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELD 1325
Score = 38 (18.4 bits), Expect = 2.9e-51, Sum P(5) = 2.9e-51
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 528 KRAREV--RSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSS 574
KR +E R E + E++ + + E K ++EG+ +P V S+
Sbjct: 1295 KRQQEETNRVKERKRKREKYAEKKKKEDELDGKRRKEGMNLVIPFVPSA 1343
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 371 (135.7 bits), Expect = 5.8e-51, Sum P(5) = 5.8e-51
Identities = 73/159 (45%), Positives = 106/159 (66%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL LD LL +LK+ HRVL +S MTR++D++E+Y+ ++++ Y+RLDG + +R ++
Sbjct: 1104 GKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMV 1163
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
F Q + F+FLLS RAGG+G+NL AADTVI +D+DWNP VD QA RAHR+GQ + V
Sbjct: 1164 ADF-QTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV 1222
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNT 400
V R T+EE++ A+ K + I+ G F +T
Sbjct: 1223 TVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDT 1261
Score = 296 (109.3 bits), Expect = 5.8e-51, Sum P(5) = 5.8e-51
Identities = 73/222 (32%), Positives = 121/222 (54%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V++T+Y+ ++ D +++W Y+++DE +K++S L +Q +RLLLTG
Sbjct: 626 FHVVITSYQLVVQ--DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTG 683
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F+S E+F++WF+K ES+ +N ++R
Sbjct: 684 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENK-------SAIDENQLSR 736
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVE-----ENL--GSIGN 195
LH +L+PF+LRR+K VENEL +KIE L C+ ++ QKLL + ++ E+L S+G+
Sbjct: 737 LHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQKLLYQALKNKISIEDLLQSSMGS 796
Query: 196 SKGR-----SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH 232
++ S+ N VM+ R +CNHP L E +T P H
Sbjct: 797 TQQAQNTTSSLMNLVMQFRKVCNHPELF----ERQETWSPFH 834
Score = 45 (20.9 bits), Expect = 5.8e-51, Sum P(5) = 5.8e-51
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1932 QSGVVVPENLSDFCQPSSSLAPWEAKID 1959
Q+ +V P L+DF PSS+ +P + ++
Sbjct: 1496 QTSIVRPAGLADF-GPSSASSPLSSPLN 1522
Score = 45 (20.9 bits), Expect = 5.8e-51, Sum P(5) = 5.8e-51
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 1191 QSSDDKTCSVTPTVETPPPG--FNSPNENPGELTGTKNDASVRGDHTPVSGHTLASK 1245
+SS D V + P NSP G ++ T N S++ GH+ S+
Sbjct: 1378 ESSSDMLVIVDDPASSAPQSRATNSPASITGSVSDTVNGISIQEVPAAGRGHSARSR 1434
Score = 40 (19.1 bits), Expect = 1.9e-50, Sum P(5) = 1.9e-50
Identities = 25/99 (25%), Positives = 35/99 (35%)
Query: 696 SACPSTPMQPKGRGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESL 755
SA PS P + +G +P LV+ DD S P + P S +
Sbjct: 1354 SAMPS-PFSEISISSELHTGS-IPPDESSSDMLVIV---DDPASSAPQSRATNSPASIT- 1407
Query: 756 NPSGGESTATDG-NVSSIPTAPVPDSV-SPSAVKGQSGT 792
G S +G ++ +P A S S KG T
Sbjct: 1408 ---GSVSDTVNGISIQEVPAAGRGHSARSRGRPKGSGST 1443
Score = 39 (18.8 bits), Expect = 8.2e-51, Sum P(4) = 8.2e-51
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 768 NVSSIPTAPVPDSVSPSAVKGQSGTID--PSSAVAALNSELN 807
NVS +A P + S V+ +G D PSSA + L+S LN
Sbjct: 1484 NVSKGISASSP--LQTSIVR-PAGLADFGPSSASSPLSSPLN 1522
Score = 39 (18.8 bits), Expect = 2.4e-50, Sum P(5) = 2.4e-50
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1086 GEAPRRRGKKQGSG 1099
G + R RG+ +GSG
Sbjct: 1428 GHSARSRGRPKGSG 1441
Score = 37 (18.1 bits), Expect = 5.8e-51, Sum P(5) = 5.8e-51
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 528 KRAREV--RSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSS 574
KR +E R E + E++ + + E K ++EG+ +P V S+
Sbjct: 1288 KRQQEESNRVKERKRKREKYAEKKKKEDELDGKRRKEGVNLVIPFVPSA 1336
Score = 37 (18.1 bits), Expect = 1.3e-50, Sum P(4) = 1.3e-50
Identities = 29/116 (25%), Positives = 46/116 (39%)
Query: 2165 GGGVVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVPETVPEELG 2224
G +V V + + LS + SVD P E + ++ G +P P+E
Sbjct: 1325 GVNLVIPFVPSADNSNLSADGDDSFISVDSAMPSPFSEISISSELH-TGSIP---PDE-- 1378
Query: 2225 LPSSPMVVXXXXXXXXXXXXPSASSIPRGES-KGPDAEANNIIDAEGGGNMRQTVP 2279
SS M+V P ASS P+ + P + ++ D G ++ Q VP
Sbjct: 1379 -SSSDMLVIVDD--------P-ASSAPQSRATNSPASITGSVSDTVNGISI-QEVP 1423
>UNIPROTKB|I3L6N4 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
Uniprot:I3L6N4
Length = 1798
Score = 571 (206.1 bits), Expect = 2.2e-50, Sum P(2) = 2.2e-50
Identities = 141/363 (38%), Positives = 199/363 (54%)
Query: 26 LLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPX 85
+L T ++ K D+ L + W +I +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 582 ILLTTYEILLK-DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 640
Query: 86 XXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQ 145
F E FS W + FE + LH+
Sbjct: 641 QNSLKELWSLLH------FIMPEKFSSW--EDFEEEHGKGREYGYAS----------LHK 682
Query: 146 VLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRSVH- 202
L PF+LRR+K VE LP K+E+++R E SA QK K + N ++ SKG +
Sbjct: 683 ELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGF 742
Query: 203 -NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRV 261
N +MEL+ CNH YL + + + + L ++R GKL +LD+LL +L+ +RV
Sbjct: 743 LNIMMELKKCCNHCYLIK-PPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV 801
Query: 262 LFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAG 321
L FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FLLS RAG
Sbjct: 802 LIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG 861
Query: 322 GVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAE 381
G+G+NL +ADTV+IFD+DWNPQ DLQAQARAHR G V + R T +VEE + A+
Sbjct: 862 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAK 921
Query: 382 HKL 384
K+
Sbjct: 922 KKM 924
Score = 187 (70.9 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 63/198 (31%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 579 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 636
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S EDF + K E ++
Sbjct: 637 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------YASLHKELEPFLLR 690
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L GS G++ G
Sbjct: 691 RV----KKDVEKSLPAKVEQILRMEMSALQK----QYYKWILTRNYKALSKGSKGSTSG- 741
Query: 200 SVHNSVMELRNICNHPYL 217
N +MEL+ CNH YL
Sbjct: 742 -FLNIMMELKKCCNHCYL 758
Score = 58 (25.5 bits), Expect = 2.2e-50, Sum P(2) = 2.2e-50
Identities = 26/117 (22%), Positives = 52/117 (44%)
Query: 1998 EHLDIPASLATPEEK--TEG-SEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKS 2054
E++D S+ P +K TEG SE+ P+ +++P+E EA ++ + EK
Sbjct: 1367 ENMDEITSVKHPNKKIKTEGDSEEKPEPDVCIKKEPEEKR-EAKEKENKRELKREIKEKE 1425
Query: 2055 SE-DLATPPLSLANEEEMIEGFDNDPTGISMAVMDSKECAAEAADQMCVSEGCVVVT 2110
+ D+ E ++ E + + +SK + E + + +S+ V +T
Sbjct: 1426 DKKDIKEKDFKEKRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHIT 1482
Score = 56 (24.8 bits), Expect = 3.6e-50, Sum P(2) = 3.6e-50
Identities = 33/120 (27%), Positives = 50/120 (41%)
Query: 2261 EANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESK 2320
EA + A GG+ R+ + S V+EE I+ S P+ SEK D+ +
Sbjct: 1315 EAQRLSGA--GGSKRRKARAKKNKAMKSIKVKEE-IKSDSSPLPSEKSDEDD----DKKE 1367
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAE-EEKNECSDKEPVGSSVSQIESKE 2379
D E++S + + EE P + E EEK E +KE +I+ KE
Sbjct: 1368 NMD-EITS-VKHPNKKIKTEGDSEEKPEPDVCIKKEPEEKREAKEKENKRELKREIKEKE 1425
Score = 54 (24.1 bits), Expect = 5.8e-50, Sum P(2) = 5.8e-50
Identities = 35/178 (19%), Positives = 72/178 (40%)
Query: 1298 RNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAP 1357
+N+ +K +E S +P +E +++ + + + +K E P
Sbjct: 1334 KNKAMKSIKVKEEIKSDSSPLPSEKSDEDD-DKKENMDEITSVKHPNKKIKTEGDSEEKP 1392
Query: 1358 GFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDD 1417
D+ I+K E+ +AK K L E + + E+K D +++ +
Sbjct: 1393 EPDVCIKKEPEEKR---EAKEKENKRELKRE-------IKEKEDKKD---IKEKDFKEKR 1439
Query: 1418 HSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPL-ETPL-IMKSTEGPSVSMKADDV 1473
+ VKE I + D + + + E S K L + P+ I S E +S +++++
Sbjct: 1440 ENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGEPVPISEESEEL 1497
Score = 53 (23.7 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
Identities = 31/154 (20%), Positives = 61/154 (39%)
Query: 1963 EKDPVSSQSVLE--GSKETVAEAGDQMDISIMPEK-LPEHLDIPASLATPEEKTEGSEKD 2019
+K+P + E +E E ++ D + EK E + A +EK EK
Sbjct: 1399 KKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRENKVKEAIQKEKDIKEEKL 1458
Query: 2020 PDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANE-----EEMIEG 2074
+S ++E K+S + + G + + SE+L S+ E + ++
Sbjct: 1459 NESKSESKERSKKSSLSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQ 1518
Query: 2075 FDNDPTGISMA--VMDSKECAAEAADQM--CVSE 2104
D G+S + +++C + D + C+ E
Sbjct: 1519 LDRPEKGLSEREQLEHTRQCLIKIGDHITECLKE 1552
Score = 49 (22.3 bits), Expect = 2.2e-48, Sum P(3) = 2.2e-48
Identities = 21/97 (21%), Positives = 42/97 (43%)
Query: 2290 DVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADG- 2348
D++E+ + K KE+I + E K +++ S+ + + PV A G
Sbjct: 1429 DIKEKDFK--EKRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGE 1486
Query: 2349 PASFLAAEEEKNE-----CSDK-EPVGSSVSQIESKE 2379
P EE ++ C ++ PV +++ Q++ E
Sbjct: 1487 PVPISEESEELDQKTFSICKERMRPVKAALKQLDRPE 1523
Score = 45 (20.9 bits), Expect = 2.2e-48, Sum P(3) = 2.2e-48
Identities = 51/230 (22%), Positives = 89/230 (38%)
Query: 1824 GSSLVLQDKASEAE-IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHS----PVH 1878
G L+D +S E G R+ + V G + R +SGV + + +SH P+H
Sbjct: 1169 GCIKALKDNSSGTERTGGRLGK--VKGPTFR-ISGV------QVNAKLVISHEEELIPLH 1219
Query: 1879 VVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV--LEDSKGS---IGDQMDCCQS 1933
EE ++ TK D K+ DSNL++ E GS I D +
Sbjct: 1220 KSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLT 1279
Query: 1934 GVVVPENLSDFCQPSS--SLAPWEAKIDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDIS 1990
++P++ Q + A + K+ + S GSK A A + + +
Sbjct: 1280 HKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQRLSGAGGSKRRKARA--KKNKA 1337
Query: 1991 IMPEKLPEHLDIPASLATPEEKTEGSEKDPD-SSFAAQEDPKESVVEAGD 2039
+ K+ E + +S E+ E +K + + + P + + GD
Sbjct: 1338 MKSIKVKEEIKSDSSPLPSEKSDEDDDKKENMDEITSVKHPNKKIKTEGD 1387
Score = 45 (20.9 bits), Expect = 1.5e-47, Sum P(3) = 1.5e-47
Identities = 12/56 (21%), Positives = 27/56 (48%)
Query: 528 KRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPAVYSTE 583
KR +V+ ++ + + EK+ +++S + K+ L + + +S P S E
Sbjct: 1438 KRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGEPVPISEE 1493
Score = 44 (20.5 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 1243 ASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKH-NEQSRNQN 1301
A K+ +K E K+ + + + + DDK N++ +I KH N++ + +
Sbjct: 1337 AMKSIKVKEEIKSDSSPLPSEKSDEDDDKK----ENMD------EITSVKHPNKKIKTEG 1386
Query: 1302 NPEVKGE-ETPVSSEAPASTEAFEQE 1326
+ E K E + + E EA E+E
Sbjct: 1387 DSEEKPEPDVCIKKEPEEKREAKEKE 1412
Score = 41 (19.5 bits), Expect = 5.8e-48, Sum P(3) = 5.8e-48
Identities = 20/84 (23%), Positives = 33/84 (39%)
Query: 1949 SSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLAT 2008
SS P E + +K+ + + ++ + + GD E+ PE D+
Sbjct: 1351 SSPLPSEKSDEDDDKKENMDEITSVKHPNKKIKTEGDS-------EEKPEP-DVCIK-KE 1401
Query: 2009 PEEKTEGSEKDPDSSFAAQEDPKE 2032
PEEK E EK+ + KE
Sbjct: 1402 PEEKREAKEKENKRELKREIKEKE 1425
Score = 41 (19.5 bits), Expect = 1.5e-47, Sum P(3) = 1.5e-47
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1426 HRSPDHSDMVIGNVPGNTSED 1446
HRS DH + G++ T D
Sbjct: 1698 HRSRDHRSSLEGSLKDRTHSD 1718
Score = 41 (19.5 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 32/135 (23%), Positives = 54/135 (40%)
Query: 1881 EREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPEN 1940
+RE E+ L KE++ D K+ D K +I + D + + ++
Sbjct: 1405 KREAKEKENKRELKREIKEKE-DKKDIKEKDFKEKRENKVKEAIQKEKDIKEEKLNESKS 1463
Query: 1941 LSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLP-EH 1999
S SSL+ I S E P+S +S E ++T + ++M P K +
Sbjct: 1464 ESKERSKKSSLSDAPVHITASGEPVPISEESE-ELDQKTFSICKERM----RPVKAALKQ 1518
Query: 2000 LDIPASLATPEEKTE 2014
LD P + E+ E
Sbjct: 1519 LDRPEKGLSEREQLE 1533
>UNIPROTKB|I3LIS2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
Length = 1799
Score = 571 (206.1 bits), Expect = 2.2e-50, Sum P(2) = 2.2e-50
Identities = 141/363 (38%), Positives = 199/363 (54%)
Query: 26 LLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPX 85
+L T ++ K D+ L + W +I +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 583 ILLTTYEILLK-DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 641
Query: 86 XXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQ 145
F E FS W + FE + LH+
Sbjct: 642 QNSLKELWSLLH------FIMPEKFSSW--EDFEEEHGKGREYGYAS----------LHK 683
Query: 146 VLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRSVH- 202
L PF+LRR+K VE LP K+E+++R E SA QK K + N ++ SKG +
Sbjct: 684 ELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGF 743
Query: 203 -NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRV 261
N +MEL+ CNH YL + + + + L ++R GKL +LD+LL +L+ +RV
Sbjct: 744 LNIMMELKKCCNHCYLIK-PPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV 802
Query: 262 LFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAG 321
L FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FLLS RAG
Sbjct: 803 LIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG 862
Query: 322 GVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAE 381
G+G+NL +ADTV+IFD+DWNPQ DLQAQARAHR G V + R T +VEE + A+
Sbjct: 863 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAK 922
Query: 382 HKL 384
K+
Sbjct: 923 KKM 925
Score = 187 (70.9 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 63/198 (31%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 580 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 637
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S EDF + K E ++
Sbjct: 638 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------YASLHKELEPFLLR 691
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L GS G++ G
Sbjct: 692 RV----KKDVEKSLPAKVEQILRMEMSALQK----QYYKWILTRNYKALSKGSKGSTSG- 742
Query: 200 SVHNSVMELRNICNHPYL 217
N +MEL+ CNH YL
Sbjct: 743 -FLNIMMELKKCCNHCYL 759
Score = 58 (25.5 bits), Expect = 2.2e-50, Sum P(2) = 2.2e-50
Identities = 26/117 (22%), Positives = 52/117 (44%)
Query: 1998 EHLDIPASLATPEEK--TEG-SEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKS 2054
E++D S+ P +K TEG SE+ P+ +++P+E EA ++ + EK
Sbjct: 1368 ENMDEITSVKHPNKKIKTEGDSEEKPEPDVCIKKEPEEKR-EAKEKENKRELKREIKEKE 1426
Query: 2055 SE-DLATPPLSLANEEEMIEGFDNDPTGISMAVMDSKECAAEAADQMCVSEGCVVVT 2110
+ D+ E ++ E + + +SK + E + + +S+ V +T
Sbjct: 1427 DKKDIKEKDFKEKRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHIT 1483
Score = 56 (24.8 bits), Expect = 3.6e-50, Sum P(2) = 3.6e-50
Identities = 33/120 (27%), Positives = 50/120 (41%)
Query: 2261 EANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDESK 2320
EA + A GG+ R+ + S V+EE I+ S P+ SEK D+ +
Sbjct: 1316 EAQRLSGA--GGSKRRKARAKKNKAMKSIKVKEE-IKSDSSPLPSEKSDEDD----DKKE 1368
Query: 2321 GPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAE-EEKNECSDKEPVGSSVSQIESKE 2379
D E++S + + EE P + E EEK E +KE +I+ KE
Sbjct: 1369 NMD-EITS-VKHPNKKIKTEGDSEEKPEPDVCIKKEPEEKREAKEKENKRELKREIKEKE 1426
Score = 54 (24.1 bits), Expect = 5.8e-50, Sum P(2) = 5.8e-50
Identities = 35/178 (19%), Positives = 72/178 (40%)
Query: 1298 RNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAP 1357
+N+ +K +E S +P +E +++ + + + +K E P
Sbjct: 1335 KNKAMKSIKVKEEIKSDSSPLPSEKSDEDD-DKKENMDEITSVKHPNKKIKTEGDSEEKP 1393
Query: 1358 GFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTVDD 1417
D+ I+K E+ +AK K L E + + E+K D +++ +
Sbjct: 1394 EPDVCIKKEPEEKR---EAKEKENKRELKRE-------IKEKEDKKD---IKEKDFKEKR 1440
Query: 1418 HSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPL-ETPL-IMKSTEGPSVSMKADDV 1473
+ VKE I + D + + + E S K L + P+ I S E +S +++++
Sbjct: 1441 ENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGEPVPISEESEEL 1498
Score = 53 (23.7 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
Identities = 31/154 (20%), Positives = 61/154 (39%)
Query: 1963 EKDPVSSQSVLE--GSKETVAEAGDQMDISIMPEK-LPEHLDIPASLATPEEKTEGSEKD 2019
+K+P + E +E E ++ D + EK E + A +EK EK
Sbjct: 1400 KKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRENKVKEAIQKEKDIKEEKL 1459
Query: 2020 PDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANE-----EEMIEG 2074
+S ++E K+S + + G + + SE+L S+ E + ++
Sbjct: 1460 NESKSESKERSKKSSLSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQ 1519
Query: 2075 FDNDPTGISMA--VMDSKECAAEAADQM--CVSE 2104
D G+S + +++C + D + C+ E
Sbjct: 1520 LDRPEKGLSEREQLEHTRQCLIKIGDHITECLKE 1553
Score = 49 (22.3 bits), Expect = 2.2e-48, Sum P(3) = 2.2e-48
Identities = 21/97 (21%), Positives = 42/97 (43%)
Query: 2290 DVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADG- 2348
D++E+ + K KE+I + E K +++ S+ + + PV A G
Sbjct: 1430 DIKEKDFK--EKRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGE 1487
Query: 2349 PASFLAAEEEKNE-----CSDK-EPVGSSVSQIESKE 2379
P EE ++ C ++ PV +++ Q++ E
Sbjct: 1488 PVPISEESEELDQKTFSICKERMRPVKAALKQLDRPE 1524
Score = 45 (20.9 bits), Expect = 2.2e-48, Sum P(3) = 2.2e-48
Identities = 51/230 (22%), Positives = 89/230 (38%)
Query: 1824 GSSLVLQDKASEAE-IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHS----PVH 1878
G L+D +S E G R+ + V G + R +SGV + + +SH P+H
Sbjct: 1170 GCIKALKDNSSGTERTGGRLGK--VKGPTFR-ISGV------QVNAKLVISHEEELIPLH 1220
Query: 1879 VVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV--LEDSKGS---IGDQMDCCQS 1933
EE ++ TK D K+ DSNL++ E GS I D +
Sbjct: 1221 KSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLT 1280
Query: 1934 GVVVPENLSDFCQPSS--SLAPWEAKIDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDIS 1990
++P++ Q + A + K+ + S GSK A A + + +
Sbjct: 1281 HKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQRLSGAGGSKRRKARA--KKNKA 1338
Query: 1991 IMPEKLPEHLDIPASLATPEEKTEGSEKDPD-SSFAAQEDPKESVVEAGD 2039
+ K+ E + +S E+ E +K + + + P + + GD
Sbjct: 1339 MKSIKVKEEIKSDSSPLPSEKSDEDDDKKENMDEITSVKHPNKKIKTEGD 1388
Score = 45 (20.9 bits), Expect = 1.5e-47, Sum P(3) = 1.5e-47
Identities = 12/56 (21%), Positives = 27/56 (48%)
Query: 528 KRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPAVYSTE 583
KR +V+ ++ + + EK+ +++S + K+ L + + +S P S E
Sbjct: 1439 KRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGEPVPISEE 1494
Score = 44 (20.5 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 1243 ASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPPGFDIPIEKH-NEQSRNQN 1301
A K+ +K E K+ + + + + DDK N++ +I KH N++ + +
Sbjct: 1338 AMKSIKVKEEIKSDSSPLPSEKSDEDDDKK----ENMD------EITSVKHPNKKIKTEG 1387
Query: 1302 NPEVKGE-ETPVSSEAPASTEAFEQE 1326
+ E K E + + E EA E+E
Sbjct: 1388 DSEEKPEPDVCIKKEPEEKREAKEKE 1413
Score = 41 (19.5 bits), Expect = 5.8e-48, Sum P(3) = 5.8e-48
Identities = 20/84 (23%), Positives = 33/84 (39%)
Query: 1949 SSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLAT 2008
SS P E + +K+ + + ++ + + GD E+ PE D+
Sbjct: 1352 SSPLPSEKSDEDDDKKENMDEITSVKHPNKKIKTEGDS-------EEKPEP-DVCIK-KE 1402
Query: 2009 PEEKTEGSEKDPDSSFAAQEDPKE 2032
PEEK E EK+ + KE
Sbjct: 1403 PEEKREAKEKENKRELKREIKEKE 1426
Score = 41 (19.5 bits), Expect = 1.5e-47, Sum P(3) = 1.5e-47
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1426 HRSPDHSDMVIGNVPGNTSED 1446
HRS DH + G++ T D
Sbjct: 1699 HRSRDHRSSLEGSLKDRTHSD 1719
Score = 41 (19.5 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 32/135 (23%), Positives = 54/135 (40%)
Query: 1881 EREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVVVPEN 1940
+RE E+ L KE++ D K+ D K +I + D + + ++
Sbjct: 1406 KREAKEKENKRELKREIKEKE-DKKDIKEKDFKEKRENKVKEAIQKEKDIKEEKLNESKS 1464
Query: 1941 LSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLP-EH 1999
S SSL+ I S E P+S +S E ++T + ++M P K +
Sbjct: 1465 ESKERSKKSSLSDAPVHITASGEPVPISEESE-ELDQKTFSICKERM----RPVKAALKQ 1519
Query: 2000 LDIPASLATPEEKTE 2014
LD P + E+ E
Sbjct: 1520 LDRPEKGLSEREQLE 1534
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 372 (136.0 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 73/141 (51%), Positives = 99/141 (70%)
Query: 243 KLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALID 302
KL LD LL KLK+ HRVL + MT+++D+ME+YLT++QY ++RLDG + DR L+
Sbjct: 1300 KLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVH 1359
Query: 303 KFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVL 362
+ Q + F+FLLS RAGG+G+NL AADTVI +D+DWNP +D QA RAHR+GQ R V
Sbjct: 1360 DW-QTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVT 1418
Query: 363 VLRFETVQTVEEQVRASAEHK 383
V R T+EE++R A+ K
Sbjct: 1419 VYRLLVRGTIEERMRDRAKQK 1439
Score = 257 (95.5 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 70/227 (30%), Positives = 115/227 (50%)
Query: 13 YSREKIVHQK---FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL 69
+ R+ + + K F+V++T+Y+ ++ D L K++W Y+I+DE IK++ +L
Sbjct: 800 WDRKNLRYNKNAPFHVMVTSYQMVVT--DANYLQKMKWQYMILDEAQAIKSSQSSRWKNL 857
Query: 70 KHYQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXX 129
+ +RLLLTGTP +F+S ++F++WF+K ES+ + +
Sbjct: 858 LSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLN 917
Query: 130 XXXXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCE-----ASAYQKLLMK 184
+ RLH +L+PF+LRR+K V++EL +KIE V C+ A YQ +L
Sbjct: 918 QQQ-------LRRLHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQ-VLKS 969
Query: 185 RVEENLGSIGN-----SKGRSVHNS---------VMELRNICNHPYL 217
++ N +I N S S NS VM+ R +CNHP L
Sbjct: 970 QISTNYDAIENAATNDSTSNSASNSGSDQNLINAVMQFRKVCNHPDL 1016
Score = 46 (21.3 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 910 ATSADVAGPDQK--PAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASD 967
+ SA +G DQ A R V N P +L D S S +T + SM +VA++
Sbjct: 988 SNSASNSGSDQNLINAVMQFRKV-CNHP-DLFERADVDSPFSFTTFGKTTSMLTASVANN 1045
Query: 968 TKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLPAL---DSIT 1024
V+S NS+ + LS+M + ++ F + ++ + K +LP L D I
Sbjct: 1046 NSSVIS-NSN--------MNLSSMSS-NNISNGKFTDLIYSSRNPIKYSLPRLIYEDLIL 1095
Query: 1025 EPYTGSTNTEGISNTIHHV 1043
Y N I+N + +V
Sbjct: 1096 PNYN---NDVDIANKLKNV 1111
Score = 45 (20.9 bits), Expect = 5.1e-28, Sum P(2) = 5.1e-28
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 153 RRLKHKVENELPEKIERLVRCEASAYQ--KLLMKRVEENLGSIGNSKGRSVHNSVMELRN 210
R LK K+E E E+ ++ + S Q KL + L S + GR + + +E N
Sbjct: 551 RDLKKKIEKEAMEQAKKEEEEKESKRQAKKLNFLLTQTELYS--HFIGRKIKTNELEGNN 608
Query: 211 ICNHPYLSQLHAEEVDTLIP 230
+ ++ SQ + + + L P
Sbjct: 609 VSSNDSESQKNID-ISALAP 627
Score = 39 (18.8 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 1015 ATLPALDSITEPYTGSTNTEGIS 1037
+T P L + E G NT+ +S
Sbjct: 1144 STTPLLKRVIERTNGPKNTDSLS 1166
Score = 37 (18.1 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 469 DGEPLPPLPSRLVTDDDLKALY-----EAMKIYDAPKTGVSP 505
+ E PL S+ ++D Y + + + D PKTG+ P
Sbjct: 1234 NNELFDPLISQALSDIPAITQYNMHVKKGIPVEDFPKTGLFP 1275
>UNIPROTKB|F1RN66 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
Uniprot:F1RN66
Length = 1794
Score = 571 (206.1 bits), Expect = 3.6e-50, Sum P(2) = 3.6e-50
Identities = 141/363 (38%), Positives = 199/363 (54%)
Query: 26 LLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPX 85
+L T ++ K D+ L + W +I +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 582 ILLTTYEILLK-DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 640
Query: 86 XXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQ 145
F E FS W + FE + LH+
Sbjct: 641 QNSLKELWSLLH------FIMPEKFSSW--EDFEEEHGKGREYGYAS----------LHK 682
Query: 146 VLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRSVH- 202
L PF+LRR+K VE LP K+E+++R E SA QK K + N ++ SKG +
Sbjct: 683 ELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGF 742
Query: 203 -NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRV 261
N +MEL+ CNH YL + + + + L ++R GKL +LD+LL +L+ +RV
Sbjct: 743 LNIMMELKKCCNHCYLIK-PPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV 801
Query: 262 LFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAG 321
L FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FLLS RAG
Sbjct: 802 LIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG 861
Query: 322 GVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAE 381
G+G+NL +ADTV+IFD+DWNPQ DLQAQARAHR G V + R T +VEE + A+
Sbjct: 862 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAK 921
Query: 382 HKL 384
K+
Sbjct: 922 KKM 924
Score = 187 (70.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 63/198 (31%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 579 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 636
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S EDF + K E ++
Sbjct: 637 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------YASLHKELEPFLLR 690
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L GS G++ G
Sbjct: 691 RV----KKDVEKSLPAKVEQILRMEMSALQK----QYYKWILTRNYKALSKGSKGSTSG- 741
Query: 200 SVHNSVMELRNICNHPYL 217
N +MEL+ CNH YL
Sbjct: 742 -FLNIMMELKKCCNHCYL 758
Score = 56 (24.8 bits), Expect = 3.6e-50, Sum P(2) = 3.6e-50
Identities = 33/121 (27%), Positives = 50/121 (41%)
Query: 2261 EANNIIDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSKPVGSEK-ESIASAVPLDES 2319
EA + A GG+ R+ + S V+EE I+ S P+ SEK + +
Sbjct: 1315 EAQRLSGA--GGSKRRKARAKKNKAMKSIKVKEE-IKSDSSPLPSEKSDEDDDKDEITSV 1371
Query: 2320 KGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAE-EEKNECSDKEPVGSSVSQIESK 2378
K P+ ++ + EG EE P + E EEK E +KE +I+ K
Sbjct: 1372 KHPNKKIKT----EGDS-------EEKPEPDVCIKKEPEEKREAKEKENKRELKREIKEK 1420
Query: 2379 E 2379
E
Sbjct: 1421 E 1421
Score = 54 (24.1 bits), Expect = 5.8e-50, Sum P(2) = 5.8e-50
Identities = 29/122 (23%), Positives = 49/122 (40%)
Query: 1877 VHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQSGVV 1936
+ V E KS+ LPS S ++K + + K P+ + DS+ + D C
Sbjct: 1341 IKVKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPNKKIKTEGDSEEK--PEPDVCIKKE- 1397
Query: 1937 VPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKL 1996
PE + + + + +I +K + + E + V EA Q + I EKL
Sbjct: 1398 -PEEKRE-AKEKENKRELKREIKEKEDKKDIKEKDFKEKRENKVKEA-IQKEKDIKEEKL 1454
Query: 1997 PE 1998
E
Sbjct: 1455 NE 1456
Score = 53 (23.7 bits), Expect = 7.4e-50, Sum P(2) = 7.4e-50
Identities = 31/130 (23%), Positives = 56/130 (43%)
Query: 1988 DISIMP-EKLPEHLDIP--ASLATPEEK--TEG-SEKDPDSSFAAQEDPKESVVEAGDQM 2041
D S +P EK E D S+ P +K TEG SE+ P+ +++P+E EA ++
Sbjct: 1350 DSSPLPSEKSDEDDDKDEITSVKHPNKKIKTEGDSEEKPEPDVCIKKEPEEKR-EAKEKE 1408
Query: 2042 GVSLGGATVMEKSSE-DLATPPLSLANEEEMIEGFDNDPTGISMAVMDSKECAAEAADQM 2100
+ EK + D+ E ++ E + + +SK + E + +
Sbjct: 1409 NKRELKREIKEKEDKKDIKEKDFKEKRENKVKEAIQKEKDIKEEKLNESKSESKERSKKS 1468
Query: 2101 CVSEGCVVVT 2110
+S+ V +T
Sbjct: 1469 SLSDAPVHIT 1478
Score = 53 (23.7 bits), Expect = 7.4e-50, Sum P(2) = 7.4e-50
Identities = 31/154 (20%), Positives = 61/154 (39%)
Query: 1963 EKDPVSSQSVLE--GSKETVAEAGDQMDISIMPEK-LPEHLDIPASLATPEEKTEGSEKD 2019
+K+P + E +E E ++ D + EK E + A +EK EK
Sbjct: 1395 KKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRENKVKEAIQKEKDIKEEKL 1454
Query: 2020 PDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEKSSEDLATPPLSLANE-----EEMIEG 2074
+S ++E K+S + + G + + SE+L S+ E + ++
Sbjct: 1455 NESKSESKERSKKSSLSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQ 1514
Query: 2075 FDNDPTGISMA--VMDSKECAAEAADQM--CVSE 2104
D G+S + +++C + D + C+ E
Sbjct: 1515 LDRPEKGLSEREQLEHTRQCLIKIGDHITECLKE 1548
Score = 51 (23.0 bits), Expect = 5.2e-49, Sum P(3) = 5.2e-49
Identities = 53/229 (23%), Positives = 90/229 (39%)
Query: 1824 GSSLVLQDKASEAE-IGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHS----PVH 1878
G L+D +S E G R+ + V G + R +SGV + + +SH P+H
Sbjct: 1169 GCIKALKDNSSGTERTGGRLGK--VKGPTFR-ISGV------QVNAKLVISHEEELIPLH 1219
Query: 1879 VVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVV--LEDSKGS---IGDQMDCCQS 1933
EE ++ TK D K+ DSNL++ E GS I D +
Sbjct: 1220 KSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLT 1279
Query: 1934 GVVVPENLSDFCQPSS--SLAPWEAKIDGSS-EKDPVSSQSVLEGSKETVAEAGDQMDIS 1990
++P++ Q + A + K+ + S GSK A A + + +
Sbjct: 1280 HKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQRLSGAGGSKRRKARA--KKNKA 1337
Query: 1991 IMPEKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGD 2039
+ K+ E + +S P EK++ E D + + P + + GD
Sbjct: 1338 MKSIKVKEEIKSDSS-PLPSEKSD--EDDDKDEITSVKHPNKKIKTEGD 1383
Score = 50 (22.7 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 36/180 (20%), Positives = 70/180 (38%)
Query: 1296 QSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMET 1355
++R + N +K + V E + + EK + + +K E
Sbjct: 1329 KARAKKNKAMKSIK--VKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPNKKIKTEGDSEE 1386
Query: 1356 APGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLEDTV 1415
P D+ I+K E+ +AK K L E + + E+K D +++ +
Sbjct: 1387 KPEPDVCIKKEPEEKR---EAKEKENKRELKRE-------IKEKEDKKD---IKEKDFKE 1433
Query: 1416 DDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPL-ETPL-IMKSTEGPSVSMKADDV 1473
+ VKE I + D + + + E S K L + P+ I S E +S +++++
Sbjct: 1434 KRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGEPVPISEESEEL 1493
Score = 49 (22.3 bits), Expect = 5.2e-49, Sum P(3) = 5.2e-49
Identities = 21/97 (21%), Positives = 42/97 (43%)
Query: 2290 DVEEEKIEGFSKPVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADG- 2348
D++E+ + K KE+I + E K +++ S+ + + PV A G
Sbjct: 1425 DIKEKDFK--EKRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGE 1482
Query: 2349 PASFLAAEEEKNE-----CSDK-EPVGSSVSQIESKE 2379
P EE ++ C ++ PV +++ Q++ E
Sbjct: 1483 PVPISEESEELDQKTFSICKERMRPVKAALKQLDRPE 1519
Score = 49 (22.3 bits), Expect = 8.4e-49, Sum P(3) = 8.4e-49
Identities = 27/84 (32%), Positives = 36/84 (42%)
Query: 1949 SSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLAT 2008
SS P E K D +KD ++S V +K+ E GD E+ PE D+
Sbjct: 1351 SSPLPSE-KSDEDDDKDEITS--VKHPNKKIKTE-GDS-------EEKPEP-DVCIK-KE 1397
Query: 2009 PEEKTEGSEKDPDSSFAAQEDPKE 2032
PEEK E EK+ + KE
Sbjct: 1398 PEEKREAKEKENKRELKREIKEKE 1421
Score = 45 (20.9 bits), Expect = 5.1e-49, Sum P(2) = 5.1e-49
Identities = 44/217 (20%), Positives = 86/217 (39%)
Query: 1803 VPEHKSENMGEKDDISS-EHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDE 1861
+P KS+ +KD+I+S +H +K + E GD ++P+ D + E
Sbjct: 1354 LPSEKSDEDDDKDEITSVKHP--------NKKIKTE-GDSEEKPEPDVCIKKE-----PE 1399
Query: 1862 LVDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSK 1921
EA + + E+E +++ +E K+ ++ K+ D L +SK
Sbjct: 1400 EKREAKEKENKRELKREIKEKEDKKDIKEKDFKEK-RENKVKEAIQKEKDIKEEKLNESK 1458
Query: 1922 G---------SIGDQ-MDCCQSGVVVP--ENLSDFCQPSSSLA-----PWEAKIDGSSEK 1964
S+ D + SG VP E + Q + S+ P +A +
Sbjct: 1459 SESKERSKKSSLSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQLDRP 1518
Query: 1965 DP-VSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHL 2000
+ +S + LE +++ + + GD + + PE +
Sbjct: 1519 EKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQI 1555
Score = 45 (20.9 bits), Expect = 1.5e-47, Sum P(3) = 1.5e-47
Identities = 12/56 (21%), Positives = 27/56 (48%)
Query: 528 KRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPAVYSTE 583
KR +V+ ++ + + EK+ +++S + K+ L + + +S P S E
Sbjct: 1434 KRENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGEPVPISEE 1489
Score = 41 (19.5 bits), Expect = 1.5e-47, Sum P(3) = 1.5e-47
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1426 HRSPDHSDMVIGNVPGNTSED 1446
HRS DH + G++ T D
Sbjct: 1694 HRSRDHRSSLEGSLKDRTHSD 1714
>UNIPROTKB|I3LDG1 [details] [associations]
symbol:LOC100738357 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00560000077077 EMBL:FP236283
Ensembl:ENSSSCT00000031310 OMA:ENWRTEL Uniprot:I3LDG1
Length = 323
Score = 537 (194.1 bits), Expect = 4.2e-50, P = 4.2e-50
Identities = 132/329 (40%), Positives = 176/329 (53%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D P+L KI W +IIDE HR+KN +CKL LK H++LLTGTP
Sbjct: 5 DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN 64
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F S F + F GD + + +L +L+P +LRRLK
Sbjct: 65 FLEPSQFPSETAFLEEF-------GDLKTEEQ----------VKKLQSILKPMMLRRLKD 107
Query: 158 KVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRSVHN------SVMELRN 210
VE L K E ++ E + QK + + E+N + +KG + HN ++MELR
Sbjct: 108 DVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--TKGANQHNMPNLINTMMELRK 165
Query: 211 ICNHPYLSQLHAEEV--DTL------IPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVL 262
CNHPYL E++ D P L +++ GKL ++D+LLPKL A H+VL
Sbjct: 166 CCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVL 225
Query: 263 FFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGG 322
FS M R LD++EDYL ++Y Y R+DG G R A ID+F + DS F+FLL RAGG
Sbjct: 226 IFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGG 285
Query: 323 VGVNLQAADTVIIFDTDWNPQVDLQAQAR 351
+G+NL AADT IIFD+DWNPQ DLQ R
Sbjct: 286 LGINLTAADTCIIFDSDWNPQNDLQVTIR 314
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 358 (131.1 bits), Expect = 4.2e-50, Sum P(4) = 4.2e-50
Identities = 75/169 (44%), Positives = 107/169 (63%)
Query: 241 CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL 300
CGKL+ L LL +L HR L F+ M+++LDV++ +L+ Y+Y RLDG T R A+
Sbjct: 1187 CGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAM 1246
Query: 301 IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
+++FN D F F+LS R+GGVGVNL ADTVI +D+DWNP +D QAQ R HRIGQ R+
Sbjct: 1247 MERFNA-DPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRN 1305
Query: 361 VLVLRFETVQTVEEQV--RASAEHKLG---VANQSITAGFFDNNTSAED 404
V + R + +T+EE + +A+ + +LG + T FF + S D
Sbjct: 1306 VSIYRLISERTIEENILRKATQKRRLGELAIDEAGFTPEFFKQSDSIRD 1354
Score = 290 (107.1 bits), Expect = 4.2e-50, Sum P(4) = 4.2e-50
Identities = 76/201 (37%), Positives = 103/201 (51%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V +T+Y+ + D + W Y+I+DE IKN + L + ++ RLLLTG
Sbjct: 658 FHVCITSYKTVTQ--DIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTG 715
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP IF+S +DF WF+ P + + + +I R
Sbjct: 716 TPLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAP-------LIGR 768
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLL----MKR--VEENLGSIGNS 196
LH+VLRPF+LRRLK +VE +LPEK E +V C S Q+ L M R +ENL S GN
Sbjct: 769 LHKVLRPFILRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRRSTKENLKS-GNM 827
Query: 197 KGRSVHNSVMELRNICNHPYL 217
SV N VM+LR CNHP L
Sbjct: 828 M--SVLNIVMQLRKCCNHPNL 846
Score = 59 (25.8 bits), Expect = 4.2e-50, Sum P(4) = 4.2e-50
Identities = 32/110 (29%), Positives = 50/110 (45%)
Query: 1244 SKTEALKPENKAQAGRIE-NIANSSPDDKSLPMVPNL---ETAPPGF-DI-----PIEKH 1293
+K E N A+ E N+ N+ D+KSLP + NL E A + ++ PIE++
Sbjct: 1383 AKCEDEADVNAAKIAVAEANVDNAEFDEKSLPPMSNLQGDEEADEKYMELIQQLKPIERY 1442
Query: 1294 NEQS-RNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSS 1342
Q PE EE +EA + E +K N ++ ++L D S
Sbjct: 1443 AINFLETQYKPEF--EEECKEAEALIDQKREEWDKNLNDTAVIDLDDSDS 1490
Score = 49 (22.3 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 1994 EKLPEHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVMEK 2053
EKL LD+PA L E S++DP SS A+Q ++ + G Q V A + +
Sbjct: 859 EKL--QLDVPARLF------EISQQDPSSSSASQIPEIFNLSKIGYQSSVR--SAKPLIE 908
Query: 2054 SSEDLATPPLSLANE 2068
E ++T P A E
Sbjct: 909 ELEAMSTYPEPRAPE 923
Score = 47 (21.6 bits), Expect = 4.6e-49, Sum P(4) = 4.6e-49
Identities = 19/95 (20%), Positives = 35/95 (36%)
Query: 857 PISDVSAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVA 916
PI + A + + S+ G + V G Q Q+ +Q + A ++V
Sbjct: 2023 PIRQIGAASSHQHDQGSQGPGGKPQAYHLVQQGSQQQQQQQQQATLQRRNAAAAAGSNVQ 2082
Query: 917 G-PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSG 950
Q+ +QS + Q + + SS+ G
Sbjct: 2083 FIQQQQQQQQSGKNCGQGQSFVVMGSQSSSNDGQG 2117
Score = 47 (21.6 bits), Expect = 7.4e-49, Sum P(4) = 7.4e-49
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 862 SAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSAD----VAG 917
S G S+ NLQ+ +NS +V Q+ + + I ++ G A+S G
Sbjct: 1985 STGLGSQQNLQNSHNS---EQRNNVQNMHQNQYNSSQNPPIPIRQIGAASSHQHDQGSQG 2041
Query: 918 PDQKPAEQSVRVVQ 931
P KP Q+ +VQ
Sbjct: 2042 PGGKP--QAYHLVQ 2053
Score = 41 (19.5 bits), Expect = 4.6e-49, Sum P(4) = 4.6e-49
Identities = 21/91 (23%), Positives = 36/91 (39%)
Query: 1194 DDKTCSVTPTVETPPPGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPEN 1253
D++ +V V PP G ++ P L + S++ P S H + +A P++
Sbjct: 2315 DNQAPTVAQVVVAPPQGMQQASQGPPVLH-MQRAVSMQ---MPTSHHHQGQQ-QA-PPQS 2368
Query: 1254 KAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
QA + +P S P + PP
Sbjct: 2369 SQQASQ------QAPTSDSGTSAPPRQAPPP 2393
Score = 40 (19.1 bits), Expect = 6.3e-48, Sum P(4) = 6.3e-48
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 1538 MEAEVAKCPSDAIVN 1552
ME +AKC +A VN
Sbjct: 1378 MEVAMAKCEDEADVN 1392
Score = 40 (19.1 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 16/66 (24%), Positives = 26/66 (39%)
Query: 1312 VSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSG 1371
+S + P+S+ A + ++ N S + + S AM T P P G +
Sbjct: 872 ISQQDPSSSSASQIPEIFNLSKIGYQSSVRSAKPLIEELEAMSTYPEPRAPEVGGFRFNR 931
Query: 1372 TEIDAK 1377
T AK
Sbjct: 932 TAFVAK 937
Score = 39 (18.8 bits), Expect = 4.2e-50, Sum P(4) = 4.2e-50
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 1483 LSGSPINSGTECSTVSVKTDVGNHPQNVEPTSASP 1517
L G P+ G + +V V PQ ++ S P
Sbjct: 2305 LVGRPLQRGVDNQAPTVAQVVVAPPQGMQQASQGP 2339
Score = 39 (18.8 bits), Expect = 3.3e-17, Sum P(4) = 3.3e-17
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 929 VVQSNQPINLPATHDSSSQ--PSGSTPAQVPSM 959
VV+ Q +++PA SQ PS S+ +Q+P +
Sbjct: 857 VVEKLQ-LDVPARLFEISQQDPSSSSASQIPEI 888
Score = 38 (18.4 bits), Expect = 2.1e-46, Sum P(5) = 2.1e-46
Identities = 9/44 (20%), Positives = 16/44 (36%)
Query: 1234 HTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVP 1277
H S L S+ N Q ++N+ + + P +P
Sbjct: 1980 HLQSSSTGLGSQQNLQNSHNSEQRNNVQNMHQNQYNSSQNPPIP 2023
Score = 37 (18.1 bits), Expect = 6.8e-50, Sum P(4) = 6.8e-50
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 1715 DKKADCKMEPDCL 1727
D D +ME DCL
Sbjct: 1534 DADFDLRMEDDCL 1546
Score = 37 (18.1 bits), Expect = 6.8e-50, Sum P(4) = 6.8e-50
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1461 TEGPSVSMKADDVADHSRETPILSGS--PINSGTECSTV 1497
TE S SM DD + ++ P L+ + P + T +TV
Sbjct: 1623 TEHSSFSM--DDTSQDAKIEPSLTENQQPTTTATTTTTV 1659
Score = 37 (18.1 bits), Expect = 2.1e-46, Sum P(5) = 2.1e-46
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 1100 PSIPDGSAVFDAKL 1113
PS PD A FD ++
Sbjct: 1528 PSPPDSDADFDLRM 1541
Score = 37 (18.1 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 2361 ECSDKEPVGSSVSQI 2375
E S ++P SS SQI
Sbjct: 871 EISQQDPSSSSASQI 885
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 554 (200.1 bits), Expect = 9.9e-50, P = 9.9e-50
Identities = 134/328 (40%), Positives = 185/328 (56%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ L + W +I +DE HR+KN L L ++S+HRLL+TGTP
Sbjct: 597 DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH 656
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F E FS W + FE + LH+ L PF+LRR+K
Sbjct: 657 ------FIMPEKFSSW--EDFEEEHGKGREYGYAS----------LHKELEPFLLRRVKK 698
Query: 158 KVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGN-SKGRSVH--NSVMELRNICN 213
VE LP K+E+++R E SA QK K + N ++ SKG + N +MEL+ CN
Sbjct: 699 DVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCN 758
Query: 214 HPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDV 273
H YL + + + + L ++R GKL +LD+LL +L+ +RVL FS M R+LD+
Sbjct: 759 HCYLIK-PPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDI 817
Query: 274 MEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTV 333
+ +YL ++Q+ + RLDG + G R +D FN S F FLLS RAGG+G+NL +ADTV
Sbjct: 818 LAEYLKYRQFPFQRLDG-SIGELRRQALDHFNAXGSEDFCFLLSTRAGGLGINLASADTV 876
Query: 334 IIFDTDWNPQVDLQAQARAHRIGQKRDV 361
+IFD+DWNPQ DLQAQARAHRIGQK+ V
Sbjct: 877 VIFDSDWNPQNDLQAQARAHRIGQKKQV 904
Score = 187 (70.9 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 63/198 (31%), Positives = 91/198 (45%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 583 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 640
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F+S EDF + K E ++
Sbjct: 641 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------YASLHKELEPFLLR 694
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL--GSIGNSKGR 199
R+ + V + L KVE L ++ L + Y K ++ R + L GS G++ G
Sbjct: 695 RV----KKDVEKSLPAKVEQILRMEMSALQK----QYYKWILTRNYKALSKGSKGSTSG- 745
Query: 200 SVHNSVMELRNICNHPYL 217
N +MEL+ CNH YL
Sbjct: 746 -FLNIMMELKKCCNHCYL 762
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 353 (129.3 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 68/142 (47%), Positives = 95/142 (66%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GKL LD LL LK HR+L + MTR++ + E+YL +K Y+Y+RLDG T+ R ++
Sbjct: 1236 GKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREMV 1295
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
+ Q + FIF+LS RAGG+G+NL +ADTVI +D+DWNP +D QA RAHRIGQ + V
Sbjct: 1296 QAW-QTNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQV 1354
Query: 362 LVLRFETVQTVEEQVRASAEHK 383
V R T T+E+++ A+ K
Sbjct: 1355 KVFRLVTRNTIEQKILERAKEK 1376
Score = 269 (99.8 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 68/218 (31%), Positives = 110/218 (50%)
Query: 13 YSREKIVHQK---FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL 69
+ R+ + + K F+VL+T+Y+ ++ D K++W Y+I+DE IK++S L
Sbjct: 766 WDRKSLRYDKDSPFHVLVTSYQLIVA--DIAYFQKMKWQYMILDEAQAIKSSSSSRWKSL 823
Query: 70 KHYQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXX 129
+ +RLLLTGTP IF+S ++FS WF K ES+ ++
Sbjct: 824 LNLTCRNRLLLTGTPIQNSMQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLD 883
Query: 130 XXXXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN 189
+ RLH +L+PF+LRR+K V++EL +K+E V C+ + QK L +++
Sbjct: 884 EQQ-------LRRLHMILKPFMLRRIKKNVQSELGDKVEIDVYCDLTTRQKKLYQQLRSQ 936
Query: 190 LG----------SIGNSKGRSVHNSVMELRNICNHPYL 217
+ S S S+ N VM+ R +CNHP L
Sbjct: 937 ISMSDTDLLELESNSTSSDSSLANLVMQFRKVCNHPDL 974
Score = 57 (25.1 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 32/150 (21%), Positives = 65/150 (43%)
Query: 1985 DQMDISIMPEKLPEHLDIPA----SLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ 2040
+++D++ E + ++ D+P L TP S +D S + +P E++ G
Sbjct: 1000 NELDVNYSTENIVQY-DLPRLIYDELLTPNYNK--STRDSIYSKFSIYNP-ENMNATGWL 1055
Query: 2041 MGVSLGGATVMEKSSEDLATPPLSLAN---EEEMIEG----FDND--PTGISMAVMD-SK 2090
G+++ + S +D+ + + + N E E +E ++ D P + + D S
Sbjct: 1056 QGINVSPNELKHYSQKDILSRAIEMQNKPTETEKLERINYLYEGDYIPKNKKLLITDHST 1115
Query: 2091 ECAAEAADQMCVSEGCVVVTEKLSEDLGLN 2120
+ V V + EK+S+D+ LN
Sbjct: 1116 STNSSFISNSLVFSDLVSIKEKVSQDMYLN 1145
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 372 (136.0 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 80/176 (45%), Positives = 108/176 (61%)
Query: 241 CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL 300
CGKL+ L LL +LK HR L F+ MT++LDV+E +L + Y Y+RLDG T DR L
Sbjct: 1245 CGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQIL 1304
Query: 301 IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
++FN DS +F+LS R+GG+G+NL ADTVI +D+DWNP +D Q Q R HRIGQ RD
Sbjct: 1305 TERFNT-DSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRD 1363
Query: 361 VLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAE-DRREYLESLLRE 415
V + RF + T+E + A K + N I G F + ++ R+ L S L E
Sbjct: 1364 VHIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDFTTDYFSKLSVRDLLGSELPE 1419
Score = 248 (92.4 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 63/212 (29%), Positives = 103/212 (48%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKN-ASCKLNADLKHYQSSHRLLLT 81
F+V + +Y+ ++ D+ + +W Y+++DE H IKN S + A L ++ + RLLLT
Sbjct: 796 FHVCIVSYQLVVQ--DQHSFKRKRWQYMVLDEAHNIKNFRSTRWQA-LLNFNTQRRLLLT 852
Query: 82 GTPXXXXXXXXXXXXXXXXXXI---------FNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
GTP F + F QWF +P + + +
Sbjct: 853 GTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDK 912
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLL----MKRVEE 188
+ +LHQVLRP++LRRLK VE ++P K E +V C+ S Q+ L M R +
Sbjct: 913 ETKKT--VAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQT 970
Query: 189 NLGSIGNSKGRSVHNSVMELRNICNHPYLSQL 220
++ + S+ N +M+LR +CNHP L ++
Sbjct: 971 K-ATLASGNFMSIVNCLMQLRKVCNHPNLFEV 1001
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 365 (133.5 bits), Expect = 2.8e-49, Sum P(3) = 2.8e-49
Identities = 95/255 (37%), Positives = 133/255 (52%)
Query: 241 CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL 300
CGKL+ L LL KLK HR L F+ MT++LDV+E ++ Y Y+RLDG T +R L
Sbjct: 1074 CGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTL 1133
Query: 301 IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
+ +FN F+F+LS R+GGVG+NL ADTVI +D+DWNP +D QAQ R HRIGQ R+
Sbjct: 1134 MQRFNTNPK-IFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1192
Query: 361 VLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEE 420
V + R + T+EE + A K + N I G + NT + + +E L K
Sbjct: 1193 VHIYRLISESTIEENILKKANQKRVLDNLVIQNGEY--NTEFFKKLDPME--LFSGHKAL 1248
Query: 421 XXXXXXXXXXXXXXXRSESEIDVFESVDKQRREE-EMATWRKLIRGLGTDG-----EPLP 474
S DV E+ KQ +E + +++ + D EP+
Sbjct: 1249 TTKDEKETSKHCGADIPLSNADV-EAALKQAEDEADYMALKRVEQEEAVDNQEFTEEPVE 1307
Query: 475 -PLPSRLVTDDDLKA 488
P LV +DD+KA
Sbjct: 1308 RPEDDELVNEDDIKA 1322
Score = 262 (97.3 bits), Expect = 2.8e-49, Sum P(3) = 2.8e-49
Identities = 63/198 (31%), Positives = 95/198 (47%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+V +TTY ++ D + +W Y+I+DE H IKN + L ++ S R+LLTG
Sbjct: 636 FHVCITTYRLVIQ--DSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 693
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP +F S ++F WF P + +I+R
Sbjct: 694 TPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKE-------VIDR 746
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV---EENLGSIGNSKGR 199
LH VLRPF+LRRLK VE +LP K E ++ C S Q+ L + E ++ +
Sbjct: 747 LHNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSFF 806
Query: 200 SVHNSVMELRNICNHPYL 217
+ + +M+LR +CNHP L
Sbjct: 807 GMISIIMQLRKVCNHPDL 824
Score = 61 (26.5 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 39/170 (22%), Positives = 66/170 (38%)
Query: 1826 SLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMG----VSHSPVHVVE 1881
+LV+Q+ E ++D ++ FS DE E H G +S++ V
Sbjct: 1220 NLVIQNGEYNTEFFKKLDPMEL--FSGHKALTTKDE--KETSKHCGADIPLSNADVEAAL 1275
Query: 1882 REKSEELGLPSLSSATKEEKIDGS------LDKDPDSNLVVLEDSKGSIGDQMDCCQSGV 1935
++ +E +L +EE +D +++ D LV +D K +G
Sbjct: 1276 KQAEDEADYMALKRVEQEEAVDNQEFTEEPVERPEDDELVNEDDIKADEPADQGLVAAGP 1335
Query: 1936 VVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGD 1985
E +S S + A I SS++D VL+ K+ A A D
Sbjct: 1336 A-KEEMSLL---HSDIRDERAVITTSSQEDDTD---VLDDVKQMAAAAAD 1378
Score = 54 (24.1 bits), Expect = 2.8e-49, Sum P(3) = 2.8e-49
Identities = 37/146 (25%), Positives = 65/146 (44%)
Query: 1293 HNEQSRNQNNPEVKGEETPVSSE---APASTEAFEQEKVTNTSSFVNLADLSSDDKTCSV 1349
H E+ + + E+ E P+ E A +TEA+ Q+ V + + DL ++ +
Sbjct: 1428 HIEKYKEEMEAEIDDGEEPLVYEKWDADFATEAYRQQ-VEVLAQHQLMEDLENEARE--- 1483
Query: 1350 TPAMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVE 1409
A E A ++ + + +S + K K K +++ G E+K SV
Sbjct: 1484 REAAEVA---EMVLTQN--ESAHVLKPKKKKKAKKAKYKSLKKGS--LAAESK-HVKSVV 1535
Query: 1410 KLEDTVDDHSLVKELIHRSPDHSDMV 1435
K+ED+ DD + +E + S SDMV
Sbjct: 1536 KIEDSTDDDN--EEFGYVSSSDSDMV 1559
Score = 53 (23.7 bits), Expect = 3.5e-49, Sum P(3) = 3.5e-49
Identities = 32/118 (27%), Positives = 44/118 (37%)
Query: 867 SKSNLQSEN--NSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQKPAE 924
S+S LQ N GL L+ G D+L+Q I + G + V P +
Sbjct: 1857 SRSRLQETQPINKLGLELTLEFPRGNDDSLNQ-FPPMISLSIDGSDSLNYVNEPPGEDVL 1915
Query: 925 QSVRVVQSNQPINLP--ATHDSSSQPSGSTPAQVPSMDLGNVASDT-KEVLSENSSSK 979
+ RV N+ N DS S + PA G A K LS + S+K
Sbjct: 1916 KGSRVAAENRYRNAANACIEDSFGWASNTFPANDLKSRTGTKAQSLGKHKLSASDSAK 1973
Score = 46 (21.3 bits), Expect = 6.3e-16, Sum P(3) = 6.3e-16
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 350 ARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSI 391
+R H G+KRD++V +T + + +A +HK + N I
Sbjct: 1563 SRMHMKGKKRDLIV---DTDEEKTSKKKAK-KHKKSLPNSDI 1600
Score = 42 (19.8 bits), Expect = 5.0e-48, Sum P(3) = 5.0e-48
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 2138 DPVNSSVTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPI 2188
DP+ +E+ GFE + + H+ E +EE + E+ ++P+
Sbjct: 1405 DPIIVEAAMENEAGFEEKEWELDHI--------EKYKEEMEAEIDDGEEPL 1447
Score = 42 (19.8 bits), Expect = 5.0e-48, Sum P(3) = 5.0e-48
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 916 AGPDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPA--QVPSM-DLGNVASDTKEVL 972
+GP Q S +Q QPIN + P G+ + Q P M L SD+ +
Sbjct: 1847 SGPSQPDNTISRSRLQETQPINKLGLELTLEFPRGNDDSLNQFPPMISLSIDGSDSLNYV 1906
Query: 973 SE 974
+E
Sbjct: 1907 NE 1908
Score = 38 (18.4 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 12/61 (19%), Positives = 24/61 (39%)
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSIGNSKGRSVH 202
+ ++LR + R+ + E + L S + ++NL S+G G +
Sbjct: 255 VEELLRRYTSGRVSRETSPVKDENEDNLT--SVSRVTSPVKDENQDNLASVGQDHGEDKN 312
Query: 203 N 203
N
Sbjct: 313 N 313
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 368 (134.6 bits), Expect = 5.1e-49, Sum P(4) = 5.1e-49
Identities = 74/156 (47%), Positives = 99/156 (63%)
Query: 241 CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL 300
CGKL+ L LL +L + HR L F+ MT++LD++E +L YRY+RLDG T DR L
Sbjct: 1365 CGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGATKIEDRQLL 1424
Query: 301 IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
+KFN+ D +F+LS R+GG+G+NL ADTVI +D+DWNP +D Q Q R HRIGQ RD
Sbjct: 1425 TEKFNR-DPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQVRD 1483
Query: 361 VLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFF 396
V + RF + T+E + A K + N I G F
Sbjct: 1484 VHIYRFVSEYTIESNIIKKANQKRQLDNVVIQEGEF 1519
Score = 184 (69.8 bits), Expect = 5.1e-49, Sum P(4) = 5.1e-49
Identities = 52/145 (35%), Positives = 71/145 (48%)
Query: 104 FNSSEDFSQWFNKPFE------SNG-----DNSPDXXXXXXXXXXXIINRLHQVLRPFVL 152
F + +DF QWF KP S G D + + RLHQVLRP++L
Sbjct: 1011 FANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERTTQKMDEETRNTVARLHQVLRPYLL 1070
Query: 153 RRLKHKVENELPEKIERLVRCEASAYQKLL----MKRVE--ENLGSIGNSKGRSVHNSVM 206
RRLK VE ++P K E +V C S Q+ L M R + E L S GN S+ N +M
Sbjct: 1071 RRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRAKTKETLAS-GNFL--SIINCLM 1127
Query: 207 ELRNICNHPYLSQLHAEEVDTLIPK 231
+LR +CNHP L ++ +P+
Sbjct: 1128 QLRKVCNHPDLFEVRPIVTSFAMPR 1152
Score = 122 (48.0 bits), Expect = 5.1e-49, Sum P(4) = 5.1e-49
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKN-ASCKLNADLKHYQSSHRLLLT 81
F+V +T+Y+ ++ D+ + +W Y+I+DE H IKN S + A L ++ + +RLLLT
Sbjct: 923 FHVCITSYQLVVQ--DQQSFKRRRWTYMILDEAHNIKNFRSTRWRA-LLNFNTENRLLLT 979
Query: 82 GTPXXXXXXXXXXXXXXXXXXI---------FNSSEDFSQWFNKP 117
GTP F + +DF QWF KP
Sbjct: 980 GTPLQNNLMELWSLLYFLMPSSKVNQAMPEGFANLDDFQQWFGKP 1024
Score = 53 (23.7 bits), Expect = 5.1e-49, Sum P(4) = 5.1e-49
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 1400 ENKTDGDSVEKLEDTVDDHSLVKELIHRSPDHS-DMVIGNVPGNTSEDSSKM 1450
E TD + D V D ++ KE+ R+ D S D +GNV ++ ++
Sbjct: 1518 EFTTDYFGKFSVRDLVSDSNIGKEITDRTIDFSGDAKMGNVLAQAEDEEDRV 1569
Score = 43 (20.2 bits), Expect = 6.9e-15, Sum P(3) = 6.9e-15
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 1384 PLPGEAIVAGIEV----F--KPENK---TDGDSVEKLEDTVDDHSLV 1421
P+ GE+++ + V F +P NK T V+K+ DT++ +S++
Sbjct: 1263 PIYGESLLRLLTVNAHDFSDEPYNKYCLTLSGRVDKMNDTIEKYSII 1309
Score = 39 (18.8 bits), Expect = 4.8e-34, Sum P(4) = 4.8e-34
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 153 RRLKHKVENELPEKIERLV 171
+RL+ + + E+ EK+E +V
Sbjct: 1234 QRLRREEQAEIKEKLEHVV 1252
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 546 (197.3 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
Identities = 141/366 (38%), Positives = 195/366 (53%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D L W +++DE HR+KN + L+ L + + RLLLTGTP
Sbjct: 161 DASFLKSFPWSVLVVDEAHRLKNQNSLLHKSLSEFSVAFRLLLTGTPIQNSLQELYSLLS 220
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
+F S E+ + + +E S + L+++L+PF+LRR+K
Sbjct: 221 FVEPDLF-SKEEVEDFVQR-YEDIEKESESA------------SELYKLLQPFLLRRVKA 266
Query: 158 KVENELPEKIERLVRCEASAYQK-----LLMKRVEENLGSIGNSKGRSV--HNSVMELRN 210
+V ELP+K E ++ SA QK +LMK +E + + N + V N + +LR
Sbjct: 267 EVAAELPKKTEVVIYHGMSALQKKYYKAILMKDLEIS-DAFENEMAKKVKLQNVLSQLRK 325
Query: 211 ICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRL 270
+HPYL E I H ++ GKL +LD+LL L + HRVL FS MT++
Sbjct: 326 CVDHPYLFD-GVEPEPFEIGDH----LIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQM 380
Query: 271 LDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAA 330
LD+++DY+ ++ Y Y R+DG G +R I F QQ P FIFLLS RAGGVG+NL AA
Sbjct: 381 LDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQ--PIFIFLLSTRAGGVGMNLTAA 438
Query: 331 DTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQS 390
DTVI D+D+NPQ DLQA ARAHRIGQ + V V+R TVEE + A KL + N
Sbjct: 439 DTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIICRKAASKLKLTNTI 498
Query: 391 ITAGFF 396
I G F
Sbjct: 499 IEGGRF 504
Score = 357 (130.7 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 99/300 (33%), Positives = 151/300 (50%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+VLLTTYE + D L W +++DE HR+KN + L+ L + + RLLLTG
Sbjct: 148 FHVLLTTYEICLK--DASFLKSFPWSVLVVDEAHRLKNQNSLLHKSLSEFSVAFRLLLTG 205
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSE--DFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TP +F+ E DF Q + + E +++ +
Sbjct: 206 TPIQNSLQELYSLLSFVEPDLFSKEEVEDFVQRY-EDIEKESESASE------------- 251
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQK-----LLMKRVEENLGSIGN 195
L+++L+PF+LRR+K +V ELP+K E ++ SA QK +LMK +E + + N
Sbjct: 252 --LYKLLQPFLLRRVKAEVAAELPKKTEVVIYHGMSALQKKYYKAILMKDLEIS-DAFEN 308
Query: 196 SKGRSV--HNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPK 253
+ V N + +LR +HPYL E I H ++ GKL +LD+LL
Sbjct: 309 EMAKKVKLQNVLSQLRKCVDHPYLFD-GVEPEPFEIGDH----LIEASGKLHLLDKLLAF 363
Query: 254 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 313
L + HRVL FS MT++LD+++DY+ ++ Y Y R+DG G +R I F QQ F+
Sbjct: 364 LYSKGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPIFIFL 423
Score = 48 (22.0 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
Identities = 32/117 (27%), Positives = 50/117 (42%)
Query: 447 VDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKALYEAMKI---Y-DAPKTG 502
+++++R++E A +K + ++G LPS +DL+ E Y D T
Sbjct: 663 IEEKKRKKEEAEHKKKMAWWESNGYQSFCLPSEDSEPEDLEDEAEESSAPLDYADPDSTS 722
Query: 503 VS--------PNVGVKRKG-EHLGALDTQHYGRGK--RAREVRSYEEQWTEEEFEKM 548
+ P GV+ H A D+ H+GRG A E RS E + E KM
Sbjct: 723 IKYVSGDVTHPQAGVEDAVIVHCVADDSGHWGRGGLFTALEARSAEPRKIYELAGKM 779
Score = 40 (19.1 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 1923 SIGDQMDCCQSGVVVPENLSDFCQPSSSLAPWE-AKIDGSSEK 1964
S G Q C S PE+L D + SS AP + A D +S K
Sbjct: 684 SNGYQSFCLPSEDSEPEDLEDEAEESS--APLDYADPDSTSIK 724
Score = 38 (18.4 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 2300 SKPVGSEKESIASAVPLDESKGPDA 2324
S+P E E+ S+ PLD + PD+
Sbjct: 697 SEPEDLEDEAEESSAPLDYAD-PDS 720
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 358 (131.1 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 82/219 (37%), Positives = 122/219 (55%)
Query: 184 KRVEENLG-SIGNSKGRSVHNSVMELRNICNHPYL---SQLHAEEVDTLIPKHYLPPIVR 239
K ++NL I N K + N +M+LR I + +L LH E++ L +++
Sbjct: 551 KLYKKNLQMEISNKK---LQNMMMQLRQIIDSTFLFYFPYLHPEDLT-------LETLLK 600
Query: 240 LCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGA 299
GKL++L +L+P L + H+VL +S +LD++ED+ + R+DG + R
Sbjct: 601 TSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKD 660
Query: 300 LIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKR 359
++KFN IFLLS RA G+G+NL ADTV++FD+DWNPQVDLQA R HRIGQ+
Sbjct: 661 QLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQES 720
Query: 360 DVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDN 398
V+V R T+E + A +K + I G F+N
Sbjct: 721 PVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGKFNN 759
Score = 238 (88.8 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 58/171 (33%), Positives = 89/171 (52%)
Query: 20 HQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLL 79
H +++T+YE ++ D + W ++I+DEGHR+KN +C+L +LK +S+RLL
Sbjct: 321 HGGTGIVITSYEIILR--DTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLL 378
Query: 80 LTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFES----NGDNSPDXXXXXXXX 135
LTGTP IF E F++WF+ F+S +G NS
Sbjct: 379 LTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFD--FDSLNLGSGSNSEALNKLINDE 436
Query: 136 XXX-IINRLHQVLRPFVLRRLKHKV-ENELPEKIERLVRCEASAYQKLLMK 184
+I+ LH +L+PF+LRRLK V N LP K E ++ C ++ Q+ K
Sbjct: 437 LQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYK 487
Score = 41 (19.5 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1324 EQEKVTNTSSFVNLADLSSD 1343
E KV S FVN+ DL D
Sbjct: 618 EGHKVLIYSQFVNMLDLIED 637
Score = 40 (19.1 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 1401 NKTDGDSVEKLEDTVDDHSL 1420
N+T D +EK + D H++
Sbjct: 655 NETRKDQLEKFNSSKDKHNI 674
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 556 (200.8 bits), Expect = 9.5e-47, Sum P(3) = 9.5e-47
Identities = 134/351 (38%), Positives = 192/351 (54%)
Query: 38 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXX 97
D+ LS I W +++DE HR+KN L L ++ +H+LL+TGTP
Sbjct: 523 DKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLH 582
Query: 98 XXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKH 157
F+ E+F N ESN I+ LH+ L PF+LRR+K
Sbjct: 583 FIMPEKFDCWEEFETAHN---ESNHKG---------------ISALHKKLEPFLLRRVKK 624
Query: 158 KVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRSVH---NSVMELRNICN 213
VE LP K E+++R + +A+QK K + +N + S++ N VMEL+ CN
Sbjct: 625 DVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCN 684
Query: 214 HPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDV 273
H L++ + D + L +++ GKL +LD+LL +LK HRVL FS M +LD+
Sbjct: 685 HASLTRQYDHIYDDAQGR--LQQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDI 742
Query: 274 MEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTV 333
+++YL +++ RLDG R +D +N S F FLLS RAGG+G+NL ADTV
Sbjct: 743 LQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTV 802
Query: 334 IIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 384
IIFD+DWNPQ DLQA +RAHRIGQ + V + R T +VEE++ A+ KL
Sbjct: 803 IIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKL 853
Score = 166 (63.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 58/201 (28%), Positives = 88/201 (43%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
K N +LTTYE L+ D+ LS I W +++DE HR+KN L L ++ +H+LL+T
Sbjct: 509 KINAILTTYEILLK--DKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLIT 566
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFES--NGDNSPDXXXXXXXXXXXI 139
GTP F E F W + FE+ N N +
Sbjct: 567 GTPLQNSLKELWALLH------FIMPEKFDCW--EEFETAHNESNHKGISALHKKLEPFL 618
Query: 140 INRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEE-NLGSIGNSKG 198
+ R+ + V + L K E L +++ + Y+ +L K E + G G+ G
Sbjct: 619 LRRV----KKDVEKSLPPKTEQIL--RVDMTAH-QKQFYKWILTKNYRELSKGVKGSING 671
Query: 199 RSVHNSVMELRNICNHPYLSQ 219
N VMEL+ CNH L++
Sbjct: 672 --FVNLVMELKKCCNHASLTR 690
Score = 50 (22.7 bits), Expect = 9.5e-47, Sum P(3) = 9.5e-47
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 1076 KRHGRKTPTTGEAPRRRGKKQGSGPSIPDGSAV 1108
KRH P GE ++ K++ + S+ D A+
Sbjct: 1244 KRHTNNVPQEGEKKKKEKKEEKNSSSLKDQLAL 1276
Score = 39 (18.8 bits), Expect = 9.5e-47, Sum P(3) = 9.5e-47
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 401 SAEDRREYLESLLRECKK 418
S ++ ++ +ESL CKK
Sbjct: 1060 STDEMKKLVESLSEACKK 1077
Score = 39 (18.8 bits), Expect = 9.5e-47, Sum P(3) = 9.5e-47
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 969 KEVLSENSSSKGGVIPILALSNMKAVERVN-IQSFEEK 1005
K VLS+N+++ G V P + A+ + ++ F+EK
Sbjct: 868 KTVLSKNATASGSV-PF-DKQELSAILKFGAVELFKEK 903
Score = 38 (18.4 bits), Expect = 2.7e-44, Sum P(4) = 2.7e-44
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1292 KHNEQSRNQNNP--EV-KGEETPVSSEAPASTE 1321
K E+S + P E+ K EET S + PA+ +
Sbjct: 1115 KQIERSHAELKPLHEILKSEETKTSFKPPANAK 1147
Score = 38 (18.4 bits), Expect = 2.7e-44, Sum P(4) = 2.7e-44
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 1988 DISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDS 2022
D+ + PEK H + ++K + EK+ S
Sbjct: 1235 DVPVGPEKKKRHTNNVPQEGEKKKKEKKEEKNSSS 1269
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 340 (124.7 bits), Expect = 3.9e-46, Sum P(2) = 3.9e-46
Identities = 79/211 (37%), Positives = 120/211 (56%)
Query: 201 VHNSVMELRNICNHPYLSQL-HAEEV--DTLIPKHYLPPI---VRL-CGKLEMLDRLLPK 253
++N+++ N +P + Q+ +A V D + + + P+ + L GKL L++LL K
Sbjct: 1720 INNNLLNYSNDKMNPIILQIKNATRVYHDAFLKQSIIFPLNKDISLGSGKLCALEKLLSK 1779
Query: 254 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 313
K ++ L F+ ++LD++E +L Y ++RLDG T R ++ KFN D FI
Sbjct: 1780 CKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNN-DKSIFI 1838
Query: 314 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 373
F+ S R+G +G+NL AA+ VI +DTDWNP +D QA R HRIGQ +DV V RF TVE
Sbjct: 1839 FISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQTKDVHVFRFVCEYTVE 1898
Query: 374 EQVRASAEHKLGVANQSITAGFFDN-NTSAE 403
E + K + N I G F+N NT ++
Sbjct: 1899 ENIWKKQLQKRKLDNICINMGNFNNSNTHSK 1929
Score = 254 (94.5 bits), Expect = 3.9e-46, Sum P(2) = 3.9e-46
Identities = 62/198 (31%), Positives = 100/198 (50%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F++ +++Y ++ H + +W YII+DE H IKN + K + + + LL+TG
Sbjct: 762 FHICISSYSTVVKDH--LVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITG 819
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP IF S DF +WF+ P + S +I+R
Sbjct: 820 TPLQNSLEELWSLLHFLMPNIFTSHLDFKEWFSDPLNLAIEKSK------IHHSKELIDR 873
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLM------KRVEENLGSIGNS 196
LH V+RP++LRRLK VE E+P K E +++C+ + Q++L K V+ L + GN
Sbjct: 874 LHTVIRPYILRRLKKNVEKEMPNKYEHIIKCKLTRRQQILYDEFINNKNVQNTLNT-GNY 932
Query: 197 KGRSVHNSVMELRNICNH 214
G + N +++LR +CNH
Sbjct: 933 IG--LMNILIQLRKVCNH 948
Score = 43 (20.2 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 155 LKHKVENELPEKIERLVRCEASAYQK 180
LK+ +EN+ E E + R S+ QK
Sbjct: 525 LKNDIENDSDETSEHIKRDSRSSCQK 550
Score = 42 (19.8 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 178 YQKLLMKRVEENLGSIGNSKGRSVHNSVMELRN 210
Y KL N+ SIGN + RS+ N + E N
Sbjct: 1172 YNKLCADTFN-NINSIGNEEKRSL-NVLNEQNN 1202
Score = 39 (18.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 2356 EEEKNECSDKEPVGSSVS 2373
+EEK+ C D E + S++S
Sbjct: 1636 DEEKDNCDD-EDMNSNLS 1652
Score = 38 (18.4 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 409 LESLLRECKKE 419
LE LL +CK+E
Sbjct: 1773 LEKLLSKCKRE 1783
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 340 (124.7 bits), Expect = 3.9e-46, Sum P(2) = 3.9e-46
Identities = 79/211 (37%), Positives = 120/211 (56%)
Query: 201 VHNSVMELRNICNHPYLSQL-HAEEV--DTLIPKHYLPPI---VRL-CGKLEMLDRLLPK 253
++N+++ N +P + Q+ +A V D + + + P+ + L GKL L++LL K
Sbjct: 1720 INNNLLNYSNDKMNPIILQIKNATRVYHDAFLKQSIIFPLNKDISLGSGKLCALEKLLSK 1779
Query: 254 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 313
K ++ L F+ ++LD++E +L Y ++RLDG T R ++ KFN D FI
Sbjct: 1780 CKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNN-DKSIFI 1838
Query: 314 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 373
F+ S R+G +G+NL AA+ VI +DTDWNP +D QA R HRIGQ +DV V RF TVE
Sbjct: 1839 FISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQTKDVHVFRFVCEYTVE 1898
Query: 374 EQVRASAEHKLGVANQSITAGFFDN-NTSAE 403
E + K + N I G F+N NT ++
Sbjct: 1899 ENIWKKQLQKRKLDNICINMGNFNNSNTHSK 1929
Score = 254 (94.5 bits), Expect = 3.9e-46, Sum P(2) = 3.9e-46
Identities = 62/198 (31%), Positives = 100/198 (50%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F++ +++Y ++ H + +W YII+DE H IKN + K + + + LL+TG
Sbjct: 762 FHICISSYSTVVKDH--LVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITG 819
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINR 142
TP IF S DF +WF+ P + S +I+R
Sbjct: 820 TPLQNSLEELWSLLHFLMPNIFTSHLDFKEWFSDPLNLAIEKSK------IHHSKELIDR 873
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLM------KRVEENLGSIGNS 196
LH V+RP++LRRLK VE E+P K E +++C+ + Q++L K V+ L + GN
Sbjct: 874 LHTVIRPYILRRLKKNVEKEMPNKYEHIIKCKLTRRQQILYDEFINNKNVQNTLNT-GNY 932
Query: 197 KGRSVHNSVMELRNICNH 214
G + N +++LR +CNH
Sbjct: 933 IG--LMNILIQLRKVCNH 948
Score = 43 (20.2 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 155 LKHKVENELPEKIERLVRCEASAYQK 180
LK+ +EN+ E E + R S+ QK
Sbjct: 525 LKNDIENDSDETSEHIKRDSRSSCQK 550
Score = 42 (19.8 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 178 YQKLLMKRVEENLGSIGNSKGRSVHNSVMELRN 210
Y KL N+ SIGN + RS+ N + E N
Sbjct: 1172 YNKLCADTFN-NINSIGNEEKRSL-NVLNEQNN 1202
Score = 39 (18.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 2356 EEEKNECSDKEPVGSSVS 2373
+EEK+ C D E + S++S
Sbjct: 1636 DEEKDNCDD-EDMNSNLS 1652
Score = 38 (18.4 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 409 LESLLRECKKE 419
LE LL +CK+E
Sbjct: 1773 LEKLLSKCKRE 1783
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 358 (131.1 bits), Expect = 4.4e-46, Sum P(2) = 4.4e-46
Identities = 76/152 (50%), Positives = 101/152 (66%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK LD LLPKLKA HRVL FS T +LD++E+YL +++ + RLDG T+ R LI
Sbjct: 652 GKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLI 711
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
FN DS F+FLLS +AGGVG+NL AADT +I D D+NP D QA+ R HR+GQ+R V
Sbjct: 712 TDFNGDDS-IFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPV 770
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITA 393
+ R + T+EE + +AE KL + + IT+
Sbjct: 771 TIYRLISESTIEEGILMAAEEKLKL-EKDITS 801
Score = 223 (83.6 bits), Expect = 4.4e-46, Sum P(2) = 4.4e-46
Identities = 64/201 (31%), Positives = 97/201 (48%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKI-QWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
F+VLLTTY + + + K+ ++ + Y+I DE H +KN + + A+L + R+LLT
Sbjct: 391 FDVLLTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLT 450
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSS-EDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
GTP F S ED F K +S+GD D I
Sbjct: 451 GTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQ--DEVSQFQETQ---I 505
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKL----LMKRVEENLGSIGNS 196
R ++++PFVLRRLK V LP+K+ + + S+ QK+ L+ N G + +S
Sbjct: 506 QRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEVCSS 565
Query: 197 KGRSVHNSVMELRNICNHPYL 217
R+ +ME+R I NHP L
Sbjct: 566 SERAGIAIMMEMRRIANHPLL 586
>UNIPROTKB|H0YGM3 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC011442
EMBL:AC011485 EMBL:AC006127 HGNC:HGNC:11100 ChiTaRS:SMARCA4
PRIDE:H0YGM3 Ensembl:ENST00000538456 Bgee:H0YGM3 Uniprot:H0YGM3
Length = 427
Score = 441 (160.3 bits), Expect = 6.5e-45, Sum P(4) = 6.5e-45
Identities = 96/203 (47%), Positives = 129/203 (63%)
Query: 283 YRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNP 342
++YLRLDG T DRG L+ FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP
Sbjct: 1 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 60
Query: 343 QVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSA 402
DLQAQ RAHRIGQ+ +V VLR TV +VEE++ A+A++KL V + I AG FD +S+
Sbjct: 61 HQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSS 120
Query: 403 EDRREYLESLLR-ECKKEEXXXXXXXXXXXXXXXRSESEIDVFESVDKQRREEEMATWRK 461
+RR +L+++L E + EE R E E D+F +D RR EE ++
Sbjct: 121 HERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKR 180
Query: 462 LIRGLGTDGEPLPPLPSRLVTDD 484
R + D LPS ++ DD
Sbjct: 181 KPRLMEED-----ELPSWIIKDD 198
Score = 51 (23.0 bits), Expect = 6.5e-45, Sum P(4) = 6.5e-45
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 524 YGRGKRAREVRSYEEQWTEEEF-EKMCQAESSDSPKLKEEGLE 565
+GRG R R+ Y + TE+++ +K+ + D+ GL+
Sbjct: 214 FGRGSRHRKEVDYSDSLTEKQWLKKITGKDIHDTASSVARGLQ 256
Score = 48 (22.0 bits), Expect = 6.2e-43, Sum P(3) = 6.2e-43
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 983 IPILALSNMKAVERVNIQSFEEKACTNASKSKATLPALDSITE 1025
+P + + VER+ + EEK S+ + + DS+TE
Sbjct: 190 LPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTE 232
Score = 42 (19.8 bits), Expect = 6.5e-41, Sum P(2) = 6.5e-41
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 529 RAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSS 575
RA + E+ T EE E+ + + S + ++ S PT + S
Sbjct: 266 RASKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRS 312
Score = 40 (19.1 bits), Expect = 6.5e-45, Sum P(4) = 6.5e-45
Identities = 30/126 (23%), Positives = 46/126 (36%)
Query: 1225 KNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDKSLPMVPNLETAPP 1284
K D+ G TP + K + K + K GR P +K P PNL
Sbjct: 296 KRDSDA-GSSTPTTSTRSRDKDDESKKQKKR--GR-------PPAEKLSPNPPNLTKKMK 345
Query: 1285 GFDIPIEKHNEQSRNQNNPEV-----KGEETPVSSEAPASTEAFEQ--EKVTNTSSFVNL 1337
+ K+ + S + EV +E P E F++ E++ N + +L
Sbjct: 346 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 404
Query: 1338 ADLSSD 1343
DL D
Sbjct: 405 NDLEKD 410
Score = 40 (19.1 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 1970 QSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPASLATPEEKTEGSEKDPDS 2022
+++ EG+ E + E Q S ++ D A +TP T +KD +S
Sbjct: 272 KAIEEGTLEEIEEEVRQKKSSRKRKR-----DSDAGSSTPTTSTRSRDKDDES 319
Score = 39 (18.8 bits), Expect = 6.5e-45, Sum P(4) = 6.5e-45
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 708 RGRRIQSGEQVPRRRGKKIGLVLPAASDDIPSPGPDPKTNEQPQSESLNPSGGESTAT 765
RG + Q G Q R K + + ++I K++ + + +S G ST T
Sbjct: 253 RGLQFQRGLQFCTRASKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDS---DAGSSTPT 307
>POMBASE|SPBP35G2.10 [details] [associations]
symbol:mit1 "SHREC complex subunit Mit1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
NextBio:20802445 Uniprot:Q9P793
Length = 1418
Score = 507 (183.5 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 140/387 (36%), Positives = 197/387 (50%)
Query: 42 LSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPXXXXXXXXXXXXXXXXX 101
L K QW +I+DEG R+KN L L +S +LLLTGTP
Sbjct: 678 LRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNVRE---------- 727
Query: 102 XIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLHQVLRPFVLRRLKHKVEN 161
+FN Q+ N P + N + + + LHQ+L+PF LRR+K +V +
Sbjct: 728 -LFN----LLQFLN-PMKIN---AAELEKRYSIIDTEKVTELHQILKPFFLRRVKSEVLD 778
Query: 162 ELPEKIERLVRCEASAYQKLLMKRV-EENLG------------SIGNSKGRSVHNSVMEL 208
P K+E ++ + QK L K + +NL S G + S++N +M+L
Sbjct: 779 NFPTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANTSSSGGQRTTSLNNILMQL 838
Query: 209 RNICNHPYLSQLHAEEVDTLIPKHY-LPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTM 267
R HPY+ E D +P + + K +L L+PKL HR+L FS
Sbjct: 839 RKTLAHPYIYSPDIE--DRNLPYELAMRSLEEASCKFLILRLLVPKLITRGHRILLFSQF 896
Query: 268 TRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNL 327
+ LD++ED+ +K Y R DG +S +R + ID FN +S FLLS RAGGVG+NL
Sbjct: 897 IQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGVGINL 956
Query: 328 QAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVA 387
+ADTVII D D+NP D+QA ARAHR GQK+ VLV T +VEE++ +A+ KL V
Sbjct: 957 ASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQNAQKKL-VL 1015
Query: 388 NQSITAGFFDNNTSAEDRREYLESLLR 414
+ I N+ S +D LES+LR
Sbjct: 1016 DHLIVESLDQNHNSEKD----LESILR 1038
Score = 65 (27.9 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 1216 ENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQ---AGRIENIANSSPDDKS 1272
+N + T ND S G P+ T++S T+ L + K + + IEN+ + S KS
Sbjct: 1157 DNSDDTDYTVNDRSSPGSPFPIETETISSITDTLSDKQKLKYDSSVNIENLNDESDSQKS 1216
Score = 44 (20.5 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1100 PSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADVNDVARVMKEIFSETCSSK 1159
P + + A++ K S +KSR+ F K KQ A +N + +E T SS
Sbjct: 1348 PMLRNKEAIYRLK---DSLSKSREPFHIK------KQAMARLNSFLQKKEE---PTVSSS 1395
Query: 1160 AKTGDSS 1166
AKT + S
Sbjct: 1396 AKTNELS 1402
Score = 40 (19.1 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 2168 VVAETVQEEEKTELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVPE----TVPEE 2222
+ ET+ T +K SSV+ E+ E + DV D I+ + T P+E
Sbjct: 1178 IETETISSITDTLSDKQKLKYDSSVNIENLNDESDSQKSADVHFDSILAKSLLATTPKE 1236
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 329 (120.9 bits), Expect = 9.7e-44, Sum P(3) = 9.7e-44
Identities = 84/244 (34%), Positives = 134/244 (54%)
Query: 161 NELPEKIERLVRCE----ASAYQKLLMKRVEENLGSIGNSKGRSVHN-SVMELRNICNHP 215
N P E LV+ + Q +L+ + +++ + +K + N +++LRNICN P
Sbjct: 535 NTTPSYDEALVKIRHIKSKTKIQSILIDAIYQDI--LKEAKHLKLQNLKMIQLRNICNSP 592
Query: 216 YLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVME 275
++ + ++ + ++R K ++L++LLP L ++ H+VL F+ T++LD++E
Sbjct: 593 FIYYNYP-----ILDQ---AEVIRNSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLE 644
Query: 276 DYLT---FKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADT 332
D+L + RLDG T+ R I +FN F +FL S RAGG+G+NL AADT
Sbjct: 645 DWLEESPLSHGKICRLDGSTNHQIRDEQISQFNNNPK-FKVFLSSTRAGGLGINLVAADT 703
Query: 333 VIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSIT 392
VI+ D DWNPQ+DLQA R HRIGQ V + RF ++EE + + + K + I
Sbjct: 704 VILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVLISRSGSKRFLERLVIQ 763
Query: 393 AGFF 396
G F
Sbjct: 764 MGQF 767
Score = 244 (91.0 bits), Expect = 9.7e-44, Sum P(3) = 9.7e-44
Identities = 64/167 (38%), Positives = 82/167 (49%)
Query: 24 NVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGT 83
N++LT+YE ++ D KL KI W Y+I+DEGHR+KN+ C L LK S+RLLLTGT
Sbjct: 274 NIILTSYE--ISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGT 331
Query: 84 PXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFN------KPFESNGDNSPDXXXXXXXXXX 137
P IF+ E F QWFN E G N+ +
Sbjct: 332 PLQNNLNELWSLLNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKL 391
Query: 138 XI----INRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQK 180
I I LH +L+PF+LRRLK V LP K E L+ + QK
Sbjct: 392 NIQETLIKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQK 438
Score = 49 (22.3 bits), Expect = 1.7e-13, Sum P(4) = 1.7e-13
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 517 GALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESS 554
G L R R RSY+E ++EEFE M + S
Sbjct: 492 GGLSKLRGSRSDRNSLKRSYKEADSDEEFEIMDAEDDS 529
Score = 39 (18.8 bits), Expect = 9.7e-44, Sum P(3) = 9.7e-44
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 1884 KSEELGLPSLSSATKEEKI---DGSLDKDPDSNLVV---LEDSK 1921
KS + G S SA ++EKI D +D+ D ++ ++DSK
Sbjct: 806 KSTQNGQTSQDSAEEDEKILLSDQEIDELLDRSVECYNSIDDSK 849
Score = 39 (18.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 2067 NEEEMIEGFDND 2078
N EE+ GFD D
Sbjct: 465 NHEELFNGFDVD 476
Score = 37 (18.1 bits), Expect = 1.7e-13, Sum P(4) = 1.7e-13
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 939 PATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGV 982
P +H + GST Q+ + ++ K + +S+ GG+
Sbjct: 651 PLSHGKICRLDGSTNHQIRDEQISQFNNNPKFKVFLSSTRAGGL 694
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 329 (120.9 bits), Expect = 9.7e-44, Sum P(3) = 9.7e-44
Identities = 84/244 (34%), Positives = 134/244 (54%)
Query: 161 NELPEKIERLVRCE----ASAYQKLLMKRVEENLGSIGNSKGRSVHN-SVMELRNICNHP 215
N P E LV+ + Q +L+ + +++ + +K + N +++LRNICN P
Sbjct: 535 NTTPSYDEALVKIRHIKSKTKIQSILIDAIYQDI--LKEAKHLKLQNLKMIQLRNICNSP 592
Query: 216 YLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVME 275
++ + ++ + ++R K ++L++LLP L ++ H+VL F+ T++LD++E
Sbjct: 593 FIYYNYP-----ILDQ---AEVIRNSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLE 644
Query: 276 DYLT---FKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADT 332
D+L + RLDG T+ R I +FN F +FL S RAGG+G+NL AADT
Sbjct: 645 DWLEESPLSHGKICRLDGSTNHQIRDEQISQFNNNPK-FKVFLSSTRAGGLGINLVAADT 703
Query: 333 VIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSIT 392
VI+ D DWNPQ+DLQA R HRIGQ V + RF ++EE + + + K + I
Sbjct: 704 VILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVLISRSGSKRFLERLVIQ 763
Query: 393 AGFF 396
G F
Sbjct: 764 MGQF 767
Score = 244 (91.0 bits), Expect = 9.7e-44, Sum P(3) = 9.7e-44
Identities = 64/167 (38%), Positives = 82/167 (49%)
Query: 24 NVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGT 83
N++LT+YE ++ D KL KI W Y+I+DEGHR+KN+ C L LK S+RLLLTGT
Sbjct: 274 NIILTSYE--ISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGT 331
Query: 84 PXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFN------KPFESNGDNSPDXXXXXXXXXX 137
P IF+ E F QWFN E G N+ +
Sbjct: 332 PLQNNLNELWSLLNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKL 391
Query: 138 XI----INRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQK 180
I I LH +L+PF+LRRLK V LP K E L+ + QK
Sbjct: 392 NIQETLIKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQK 438
Score = 49 (22.3 bits), Expect = 1.7e-13, Sum P(4) = 1.7e-13
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 517 GALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQAESS 554
G L R R RSY+E ++EEFE M + S
Sbjct: 492 GGLSKLRGSRSDRNSLKRSYKEADSDEEFEIMDAEDDS 529
Score = 39 (18.8 bits), Expect = 9.7e-44, Sum P(3) = 9.7e-44
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 1884 KSEELGLPSLSSATKEEKI---DGSLDKDPDSNLVV---LEDSK 1921
KS + G S SA ++EKI D +D+ D ++ ++DSK
Sbjct: 806 KSTQNGQTSQDSAEEDEKILLSDQEIDELLDRSVECYNSIDDSK 849
Score = 39 (18.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 2067 NEEEMIEGFDND 2078
N EE+ GFD D
Sbjct: 465 NHEELFNGFDVD 476
Score = 37 (18.1 bits), Expect = 1.7e-13, Sum P(4) = 1.7e-13
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 939 PATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGV 982
P +H + GST Q+ + ++ K + +S+ GG+
Sbjct: 651 PLSHGKICRLDGSTNHQIRDEQISQFNNNPKFKVFLSSTRAGGL 694
>TAIR|locus:2054955 [details] [associations]
symbol:ASG3 "ALTERED SEED GERMINATION 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002685
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 IPI:IPI00520375 RefSeq:NP_973689.2 UniGene:At.47803
ProteinModelPortal:F4IV45 SMR:F4IV45 PRIDE:F4IV45
EnsemblPlants:AT2G44980.2 GeneID:819106 KEGG:ath:AT2G44980
OMA:WALMHFC PhylomeDB:F4IV45 ArrayExpress:F4IV45 Uniprot:F4IV45
Length = 877
Score = 507 (183.5 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 153/458 (33%), Positives = 220/458 (48%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKL-NADLKHYQSSHRLLLT 81
F+VLLTTY+ + D+ LS+I W Y IIDE R+KN + L N L+ + RLL+T
Sbjct: 161 FDVLLTTYDIALV--DQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLIT 218
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP +F + + F F+ GD
Sbjct: 219 GTPIQNNLTELWALMHFCMPLVFGTLDQFLS----AFKETGDG---LSGLDVSNDKETYK 271
Query: 142 RLHQVLRPFVLRRLKHK-VENE---LPEKIER-----LVRCEASAYQKLLMKRVEENLG- 191
L +L F+LRR K +E+ LP E LV + Y +L K + L
Sbjct: 272 SLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLEL 331
Query: 192 SIGNSKGRSVHNSVMELRNICNHPYLSQ-LHAEEVDTLIPKHYLPPIVRLCGKLEMLDRL 250
S G S S+ N V++LR C+HPYL + E + +H +V+ GKL +LD+L
Sbjct: 332 SSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEE--GEH----LVQASGKLLVLDQL 385
Query: 251 LPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ--- 307
L +L + HRVL FS MT LD+++D++ ++Y Y RLDG +R A I F+ +
Sbjct: 386 LKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTER 445
Query: 308 --DSPF-----FIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
DS F+F++S RAGGVG+NL AADTVI ++ DWNPQVD QA RAHRIGQ
Sbjct: 446 GLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISH 505
Query: 361 VLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEE 420
VL + T +VEE + AE KL +++ + + D R + L R +E
Sbjct: 506 VLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKEEDGGDLRSLVFGLQRFDPEEI 565
Query: 421 XXXXXXXXXXXXXXXRSESEIDVFESV--DKQRREEEM 456
+E + + ++V DK+ R E+
Sbjct: 566 HNEESDNLKMVEISSLAEKVVAIRQNVEPDKEERRFEI 603
Score = 44 (20.5 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 1286 FDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLAD-LSSDD 1344
FD P E HNE+S N E+ ++ + A + E +K +N +D L +
Sbjct: 560 FD-PEEIHNEESDNLKMVEISS----LAEKVVAIRQNVEPDKEERRFE-INSSDTLLGNT 613
Query: 1345 KTCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKV 1378
+ S+ ++ A +EK E + + D K+
Sbjct: 614 SSASLDSELDEASYLSW-VEKLKEAARSSKDEKI 646
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 325 (119.5 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 70/152 (46%), Positives = 98/152 (64%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK +L+RLL LK RV+ FS T +LD++E +L Q+RY+RLDG T DR LI
Sbjct: 791 GKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFLKHWQHRYIRLDGKTQISDRIHLI 850
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
D+FN D F+FLLS +AGG+G+NL +A+ VI+ D D NP D QA+ R HR+GQ R+V
Sbjct: 851 DEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTREV 909
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITA 393
V++ + T+EE + + KL + Q +TA
Sbjct: 910 KVIKLISKGTIEESMLKMNQQKLKL-EQDMTA 940
Score = 235 (87.8 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 65/209 (31%), Positives = 97/209 (46%)
Query: 23 FNVLLTTYEY-LMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
FNV++TTY + + DR K++ +Y I DEGH +KN S L + HRLLLT
Sbjct: 534 FNVIVTTYNCAISSSDDRSLFRKVKLNYAIFDEGHMLKNMSSVRYQQLMRINAKHRLLLT 593
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP +F+SS S+ + F S + + I
Sbjct: 594 GTPVQNNLLELMSLLNFVMPHMFSSST--SE-IRRMFSSKAKTAEEQSTYEKER----IA 646
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSI--GNSKGR 199
Q+++PF+LRR+K +V +LP K + + C S Q+ L + L GN K
Sbjct: 647 HAKQIIKPFILRRVKDEVLKQLPPKKDHIELCAMSEKQEQLYCDLLNKLKKTMKGNEKNS 706
Query: 200 SVHNSVMELRNICNHPYLSQLHAEEVDTL 228
+ N++M+LR + NHP L + H D L
Sbjct: 707 DMGNAMMQLRKMANHPLLHR-HYYTADKL 734
Score = 43 (20.2 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 231 KHYLPPIVRLCGKLEMLDR--LLPKLKATDHRVLFFSTMTR 269
KH+ +RL GK ++ DR L+ + TD + F T+
Sbjct: 828 KHWQHRYIRLDGKTQISDRIHLIDEFN-TDMDIFVFLLSTK 867
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 502 (181.8 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 116/259 (44%), Positives = 156/259 (60%)
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGR 199
+ LH++LRPF+LRR+K +V ELP+K E ++ SA QK K + ++L + N +
Sbjct: 242 SELHRLLRPFLLRRVKAQVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAK 301
Query: 200 SV--HNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 257
V N + +LR +HPYL E + +H ++ GKL +LDRLL L +
Sbjct: 302 KVKLQNVLTQLRKCVDHPYLFD-GVEPEPFEVGEH----LIEASGKLHLLDRLLAFLYSG 356
Query: 258 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 317
HRVL FS MT +LD+++DY+ ++ Y Y R+DG G +R I F +Q P F+FLLS
Sbjct: 357 GHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGKQ--PIFVFLLS 414
Query: 318 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 377
RAGGVG+NL AADTVI D+D+NPQ DLQA ARAHRIGQ + V V+R TVEE V
Sbjct: 415 TRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVY 474
Query: 378 ASAEHKLGVANQSITAGFF 396
A KL + N I G F
Sbjct: 475 RKAASKLQLTNMVIEGGHF 493
Score = 364 (133.2 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 100/300 (33%), Positives = 149/300 (49%)
Query: 15 REKIVHQK--FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
R++ + Q+ F+VLLTTYE + D L W + +DE HR+KN S L+ L +
Sbjct: 130 RQQDLRQESGFHVLLTTYEICLK--DASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEF 187
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIF--NSSEDFSQWFNKPFESNGDNSPDXXX 130
RLLLTGTP +F EDF Q + + E ++ +
Sbjct: 188 SVVFRLLLTGTPIQNSLQELYSLLSVVEPDLFCREQVEDFVQCY-QDIEKESKSASE--- 243
Query: 131 XXXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EEN 189
LH++LRPF+LRR+K +V ELP+K E ++ SA QK K + ++
Sbjct: 244 ------------LHRLLRPFLLRRVKAQVATELPKKTEVVIYHGMSALQKKYYKAILMKD 291
Query: 190 LGSIGNSKGRSV--HNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEML 247
L + N + V N + +LR +HPYL E + +H ++ GKL +L
Sbjct: 292 LDAFENETAKKVKLQNVLTQLRKCVDHPYLFD-GVEPEPFEVGEH----LIEASGKLHLL 346
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
DRLL L + HRVL FS MT +LD+++DY+ ++ Y Y R+DG G +R I F +Q
Sbjct: 347 DRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGKQ 406
Score = 48 (22.0 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 1304 EVK-GEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSS-DDKTCSVTPAMETAPGFD- 1360
E K G+ TP + A A E+ EQE+ + +S+ + + + S P+ E F+
Sbjct: 538 ETKDGQWTPDALPAAAEGESREQEEGSELNSYGKENHMYLFEGRDYSKEPSKEDRKSFEQ 597
Query: 1361 -IPIEKGVEQSGTEIDAKVKWKNTPL-PG--EAIVAGIEVFKPENKTD 1404
+ ++K + + + ++ K + L PG E + ++ PE D
Sbjct: 598 LVNLQKTLLEKTSHGGRSLRNKGSVLIPGLAEGPIKRKKILSPEELED 645
Score = 41 (19.5 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 29/120 (24%), Positives = 49/120 (40%)
Query: 1369 QSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPE-NKTDGDSVEKLEDTV--DDHSLVKELI 1425
+ G E A++ +++ L V+G +V P+ + D V ++D+ L L
Sbjct: 704 EDGDETSAELDYEDLDLTSINYVSG-DVTHPQAGEEDAVIVHCVDDSGRWGRGGLFTALE 762
Query: 1426 HRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGPSVSMKADDVADHSRETPILSG 1485
RS + I + G + S L P+ K + + A VA H T +LSG
Sbjct: 763 ARSAEPRK--IYELAGKMKDLSLGDVLLFPIDDKESRDKGQDLLALVVAQHRDRTNVLSG 820
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 497 (180.0 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 117/259 (45%), Positives = 155/259 (59%)
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGR 199
+ L+++L+PF+LRR+K +V ELP K E ++ SA QK K + ++L + N +
Sbjct: 250 SELYKLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAK 309
Query: 200 SV--HNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 257
V N + +LR +HPYL E I H ++ GKL +LD+LL L +
Sbjct: 310 KVKLQNVLSQLRKCVDHPYLFD-GVEPEPFEIGDH----LIEASGKLHLLDKLLAFLYSK 364
Query: 258 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 317
HRVL FS MT++LD+++DYL ++ Y Y R+DG G +R I F QQ P F FLLS
Sbjct: 365 GHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQ--PIFTFLLS 422
Query: 318 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 377
RAGGVG+NL AADTVI FD+D+NPQ DLQA ARAHRIGQ + V V+R TVEE V
Sbjct: 423 TRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVY 482
Query: 378 ASAEHKLGVANQSITAGFF 396
A KL + N I G F
Sbjct: 483 RKAASKLQLTNTIIEGGHF 501
Score = 360 (131.8 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 97/291 (33%), Positives = 145/291 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
+F+VLLTTYE + D L W +++DE HR+KN S L+ L + LLLT
Sbjct: 147 RFHVLLTTYEICLK--DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLT 204
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSS--EDFSQWFNKPFESNGDNSPDXXXXXXXXXXXI 139
GTP +F+ EDF Q + + E +++ +
Sbjct: 205 GTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRY-QDIEKESESASE------------ 251
Query: 140 INRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG 198
L+++L+PF+LRR+K +V ELP K E ++ SA QK K + ++L + N
Sbjct: 252 ---LYKLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENETA 308
Query: 199 RSV--HNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKA 256
+ V N + +LR +HPYL E I H ++ GKL +LD+LL L +
Sbjct: 309 KKVKLQNVLSQLRKCVDHPYLFD-GVEPEPFEIGDH----LIEASGKLHLLDKLLAFLYS 363
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
HRVL FS MT++LD+++DYL ++ Y Y R+DG G +R I F QQ
Sbjct: 364 KGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQ 414
Score = 44 (20.5 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 1940 NLSDFCQPSSSLAPWEAKIDGSSE---KDPVSSQSVLEGSKETVAEAG 1984
N FC PS P + + + S++ +DP S+ T +AG
Sbjct: 683 NYQSFCLPSEESEPEDGEDESSAQLEYEDPDSTSIRYVSGDVTHPQAG 730
Score = 42 (19.8 bits), Expect = 3.5e-42, Sum P(2) = 3.5e-42
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTA---TDGNVSSIPTAPVPDSV 781
+PS +P+ E S L +ST+ G+V+ P A D+V
Sbjct: 689 LPSEESEPEDGEDESSAQLEYEDPDSTSIRYVSGDVTH-PQAGAEDAV 735
>UNIPROTKB|J9NZH0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
Length = 850
Score = 494 (179.0 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 133/407 (32%), Positives = 203/407 (49%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 65 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 122
Query: 73 QSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXX 132
+S++RLLLTGTP +FNS++DF WF+ GD
Sbjct: 123 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 174
Query: 133 XXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQK----LLMKRVEE 188
++ RLH VL+PF+LRR+K VE LP K E V S Q+ +L + E
Sbjct: 175 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWFVILAFFISE 228
Query: 189 NLGSIGNSKGRSVHNSVMELRNI--CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEM 246
N + + + N +M LR C + +D L + IV K+ +
Sbjct: 229 NSNNSNKNHKLDILNVIMLLREAKCCGASFC----LPSLDLLPSTLSISHIVLF--KMTL 282
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
+ L+ L + L + DY + Y Y + G + I+ FN
Sbjct: 283 FPGMKMILRQKSRCFLTSDSQFAFLSALPDYEHWPSYFYRSISGQYLFVYKKEAIEAFNA 342
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
+S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRIGQK+ V V R
Sbjct: 343 PNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRL 402
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
T TVEE++ AE KL + + I G D ++ + E L+ +
Sbjct: 403 ITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMI 449
Score = 45 (20.9 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 2338 VSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKE 2379
+ VP D P +A EE+ + EP+ + + E KE
Sbjct: 591 IGYKVPRNPDIPNPAVAQREEQKKIDGAEPL--TPEETEEKE 630
Score = 37 (18.1 bits), Expect = 1.6e-41, Sum P(2) = 1.6e-41
Identities = 6/28 (21%), Positives = 18/28 (64%)
Query: 1884 KSEELGLPSLSSATKEEKIDGSLDKDPD 1911
++ ++ P+++ +++KIDG+ P+
Sbjct: 597 RNPDIPNPAVAQREEQKKIDGAEPLTPE 624
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 486 (176.1 bits), Expect = 2.4e-42, Sum P(3) = 2.4e-42
Identities = 116/258 (44%), Positives = 157/258 (60%)
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRSV 201
LH +L+PF+LRR+K +V +LP+K+E ++ SA Q+ K + ++L + GR V
Sbjct: 250 LHNLLQPFLLRRVKSEVTADLPKKVEVVLYHGMSALQRKYYKAILTKDLDAFEGGTGRKV 309
Query: 202 --HNSVMELRNICNHPYL-SQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATD 258
N +++LR HPYL + + E + I H IV GKL +LD+LL L
Sbjct: 310 MLQNVLIQLRKCVAHPYLFNGVEPEPFE--IGDH----IVEASGKLCLLDKLLSFLYDGG 363
Query: 259 HRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSI 318
HRVL FS MT+LLD+++DY+ ++ Y Y RLDG G +R I F QQ P F+FLLS
Sbjct: 364 HRVLLFSQMTKLLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNFGQQ--PIFVFLLST 421
Query: 319 RAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRA 378
RAGGVG+NL AADTVI D+D+NPQ DLQA ARAHRIGQ + V ++R TVEE +
Sbjct: 422 RAGGVGMNLTAADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVKIIRLIGRDTVEEIIYR 481
Query: 379 SAEHKLGVANQSITAGFF 396
A KL + N + G F
Sbjct: 482 RAASKLRLTNAIVEGGQF 499
Score = 336 (123.3 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 97/291 (33%), Positives = 143/291 (49%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F VLLTTYE + D L W +++DE HR+KN + L L LLLTG
Sbjct: 146 FRVLLTTYEICLK--DAAFLKFFDWAALVVDEAHRLKNQNSLLYETLTELPVGFSLLLTG 203
Query: 83 TPXXXXXXXXXXXXXXXXXXIFNSSE--DFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TP IF + +F +++ + E + + +
Sbjct: 204 TPIQNSLQELYSLLSFIEPDIFPRKQVKEFVEYY-QAVEKESEPAKE------------- 249
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGR 199
LH +L+PF+LRR+K +V +LP+K+E ++ SA Q+ K + ++L + GR
Sbjct: 250 --LHNLLQPFLLRRVKSEVTADLPKKVEVVLYHGMSALQRKYYKAILTKDLDAFEGGTGR 307
Query: 200 SV--HNSVMELRNICNHPYL-SQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKA 256
V N +++LR HPYL + + E + I H IV GKL +LD+LL L
Sbjct: 308 KVMLQNVLIQLRKCVAHPYLFNGVEPEPFE--IGDH----IVEASGKLCLLDKLLSFLYD 361
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
HRVL FS MT+LLD+++DY+ ++ Y Y RLDG G +R I F QQ
Sbjct: 362 GGHRVLLFSQMTKLLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNFGQQ 412
Score = 58 (25.5 bits), Expect = 2.4e-42, Sum P(3) = 2.4e-42
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 2296 IEGFSKPVGSEKESIASAVPLDE--SKGPDAEVSSQ-TAIEGGGVVSIPVPEEADGP--- 2349
+EG +G K AS + L E G D +SS+ + ++ + +I + E G
Sbjct: 494 VEGGQFALGVHKPQEASDLQLSEILKFGLDKLLSSEGSTVQDVELENI-LGETKGGKWVM 552
Query: 2350 ASFLAAEEEKNECSDKEPVGSSVSQIESKEP---EAKAFEPMDVVDGAVALENTSEG 2403
+ L EEE+NE + + + SKEP + KAF+ + + A+ E + EG
Sbjct: 553 DAVLPCEEERNEDDTENHMYVYEGKDYSKEPSREDKKAFDQLLDLQKALIEETSKEG 609
Score = 46 (21.3 bits), Expect = 2.4e-42, Sum P(3) = 2.4e-42
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 8 MAVLLYSREKIVHQKFNVLLTTYEYLMN-KHD----RPKLSKIQWHYIIIDEGHRIKNAS 62
+++LLY +K+ +++ +++L L N K + P LS + Y+ G+ K
Sbjct: 82 ISLLLYLTKKLTNKERSLILCPLSVLSNWKEELERFAPGLSFVT--YV----GN--KEER 133
Query: 63 CKLNADLKHYQSSHRLLLT 81
KL +LK QS R+LLT
Sbjct: 134 YKLQQNLKE-QSHFRVLLT 151
Score = 42 (19.8 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 939 PATHDSSSQPSGSTPAQVP 957
P S+SQPS S A P
Sbjct: 877 PRNRGSASQPSSSVAASKP 895
Score = 37 (18.1 bits), Expect = 3.7e-40, Sum P(3) = 3.7e-40
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 1938 PENLSDFCQPSSSLA 1952
P N QPSSS+A
Sbjct: 877 PRNRGSASQPSSSVA 891
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 498 (180.4 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 116/259 (44%), Positives = 155/259 (59%)
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGR 199
+ LH++L+PF+LRR+K +V ELP+K E +V SA QK K + ++L + N +
Sbjct: 242 SELHRLLQPFLLRRVKAQVATELPKKTEVVVYHGMSALQKKYYKAILMKDLDAFENETAK 301
Query: 200 SV--HNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 257
V N + +LR +HPYL E + +H ++ GKL +LDRLL L +
Sbjct: 302 KVKLQNILTQLRKCVDHPYLFD-GVEPEPFEVGEH----LIEASGKLHLLDRLLAFLYSG 356
Query: 258 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 317
HRVL FS MT +LD+++DY+ ++ Y Y R+DG G +R I F Q P F+FLLS
Sbjct: 357 GHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQ--PIFVFLLS 414
Query: 318 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 377
RAGGVG+NL AADTVI D+D+NPQ DLQA ARAHRIGQ + V V+R TVEE V
Sbjct: 415 TRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVY 474
Query: 378 ASAEHKLGVANQSITAGFF 396
A KL + N I G F
Sbjct: 475 RKAASKLQLTNMVIEGGHF 493
Score = 359 (131.4 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 98/290 (33%), Positives = 143/290 (49%)
Query: 23 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 82
F+VLLTTYE + D L W + +DE HR+KN S L+ L + + RLLLTG
Sbjct: 140 FHVLLTTYEICLK--DASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTG 197
Query: 83 TPXXXXXXXXXXXXXXXXXXIF--NSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXII 140
TP +F EDF Q + + E ++ +
Sbjct: 198 TPIQNSLRELYSLLCVVEPDLFCREQVEDFVQRY-QDIEKESKSASE------------- 243
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGR 199
LH++L+PF+LRR+K +V ELP+K E +V SA QK K + ++L + N +
Sbjct: 244 --LHRLLQPFLLRRVKAQVATELPKKTEVVVYHGMSALQKKYYKAILMKDLDAFENETAK 301
Query: 200 SV--HNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 257
V N + +LR +HPYL E + +H ++ GKL +LDRLL L +
Sbjct: 302 KVKLQNILTQLRKCVDHPYLFD-GVEPEPFEVGEH----LIEASGKLHLLDRLLAFLYSG 356
Query: 258 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
HRVL FS MT +LD+++DY+ ++ Y Y R+DG G +R I F Q
Sbjct: 357 GHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQ 406
Score = 42 (19.8 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 1766 SSSKDIIAESAKADVVLDEHGKVQLLPGADNPEGGVIVPEHKSE 1809
SS +DI +S + D LP A GG + PE SE
Sbjct: 525 SSMEDIDLKSILGETK-DGQWTPDALPAAAAAGGGSLEPEEGSE 567
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 495 (179.3 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 115/259 (44%), Positives = 155/259 (59%)
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGR 199
+ LH++L+PF+LRR+K +V ELP+K E ++ SA QK K + ++L + N +
Sbjct: 248 SELHKLLQPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAK 307
Query: 200 SV--HNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 257
V N + +LR +HPYL E + H + GKL +LD+LL L +
Sbjct: 308 KVKLQNILSQLRKCVDHPYLFD-GVEPEPFEVGDH----LTEASGKLHLLDKLLAFLYSG 362
Query: 258 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 317
HRVL FS MT++LD+++DY+ ++ Y Y R+DG G +R I F QQ P F+FLLS
Sbjct: 363 GHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQ--PIFVFLLS 420
Query: 318 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 377
RAGGVG+NL AADTVI D+D+NPQ DLQA ARAHRIGQ + V V+R TVEE V
Sbjct: 421 TRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVY 480
Query: 378 ASAEHKLGVANQSITAGFF 396
A KL + N I G F
Sbjct: 481 RKAASKLQLTNMIIEGGHF 499
Score = 360 (131.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 96/291 (32%), Positives = 145/291 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
+F+VLLTTYE + D L W +++DE HR+KN S L+ L + LLLT
Sbjct: 145 RFHVLLTTYEICLK--DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLT 202
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSE--DFSQWFNKPFESNGDNSPDXXXXXXXXXXXI 139
GTP +F+ E DF Q + + E +++ +
Sbjct: 203 GTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRY-QDIEKESESASE------------ 249
Query: 140 INRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG 198
LH++L+PF+LRR+K +V ELP+K E ++ SA QK K + ++L + N
Sbjct: 250 ---LHKLLQPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETA 306
Query: 199 RSV--HNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKA 256
+ V N + +LR +HPYL E + H + GKL +LD+LL L +
Sbjct: 307 KKVKLQNILSQLRKCVDHPYLFD-GVEPEPFEVGDH----LTEASGKLHLLDKLLAFLYS 361
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
HRVL FS MT++LD+++DY+ ++ Y Y R+DG G +R I F QQ
Sbjct: 362 GGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQ 412
Score = 45 (20.9 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 528 KRAREVRSYEEQ---WTEEEFEKMCQAESSDSPKLKEEGLEKS 567
KR +E ++++ W ++ C P+ E G E S
Sbjct: 662 KRQKEEAEHKKKMAWWESNNYQSFCLPSEESEPEDLENGEESS 704
Score = 42 (19.8 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 14/60 (23%), Positives = 23/60 (38%)
Query: 2333 EGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESK--EPEAKAFEPMDV 2390
E S +P E P EE E ++P +S+ + P+A A + + V
Sbjct: 678 ESNNYQSFCLPSEESEPEDLENGEESSAELDYQDPDATSLKYVSGDVTHPQAGAEDALIV 737
>UNIPROTKB|F1SDX0 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009636 "response
to toxic substance" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008023 "transcription elongation factor complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0007256
"activation of JNKK activity" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000303 "response to superoxide" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008630
GO:GO:0005730 GO:GO:0006284 GO:GO:0003677 GO:GO:0009636
GO:GO:0003682 GO:GO:0045494 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 KO:K10841 OMA:NGEMQIF GO:GO:0000303
EMBL:CT990602 EMBL:CT990615 RefSeq:XP_003483566.1
Ensembl:ENSSSCT00000011375 GeneID:100738583 KEGG:ssc:100738583
Uniprot:F1SDX0
Length = 1481
Score = 480 (174.0 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 117/375 (31%), Positives = 196/375 (52%)
Query: 13 YSREKIVHQKFN---VLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL 69
+ +EK+V + +L+T+Y Y+ D +S+ WHY+I+DEGH+I+N + +
Sbjct: 594 HKKEKLVRDIAHCHGILITSYSYIRLMQD--DISRHDWHYVILDEGHKIRNPNAAITLAC 651
Query: 70 KHYQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXX 129
K +++ HR++L+G+P + F + F+ P G ++
Sbjct: 652 KQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPV 711
Query: 130 XXXXXXXXXIINRLHQVLRPFVLRRLKH--KVENELPEKIERLVRCEASAYQ-KLLMKRV 186
+ L + P++LRR+K K+ LP+K E+++ C + Q K+ +
Sbjct: 712 QVKTAYKCACV--LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFI 769
Query: 187 E-ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP----IVRLC 241
+ + + I N + + + ++ LR ICNHP L + IP L +
Sbjct: 770 DSKEVYRILNGE-MQIFSGLVALRKICNHPDLFSGGPKNFKG-IPGEELEEDQFGYWKRS 827
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK+ +++ LL RVL FS ++LD++E +L ++Y YL++DG T+ R LI
Sbjct: 828 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLI 887
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
++N+ D+ F+FLL+ R GG+GVNL A+ VII+D DWNP D QA+ RA RIGQK+ V
Sbjct: 888 TRYNE-DASIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQV 946
Query: 362 LVLRFETVQTVEEQV 376
V R T T+EE++
Sbjct: 947 TVYRLLTAGTIEEKI 961
Score = 70 (29.7 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 36/137 (26%), Positives = 62/137 (45%)
Query: 1984 GDQMDISIMPEKLPEHLDIPASLATP-EEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMG 2042
G +++ M +KLP+ L+ A+ ATP EEK+ + +++ + QEDP + + +
Sbjct: 1034 GTDQNVA-MGKKLPD-LNASANDATPSEEKSIAMGAEINAATSNQEDPLKDAPQTPRSLT 1091
Query: 2043 VS--LGGATVMEKSSEDLATPPLSLANEEEMIEGFDNDPTGISMAVMDSKECAAEAADQM 2100
S LGG T E ++ + + E +D TG+ E + E + +
Sbjct: 1092 SSDRLGGETDAESRLQESS----GIRGNGEC-----SDSTGVGKMCRTPGEDSIEEEEGL 1142
Query: 2101 CVS-EGCVVVTEKLSED 2116
E C V TE L E+
Sbjct: 1143 SDKRESCQVQTEPLWEN 1159
Score = 60 (26.2 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 39/193 (20%), Positives = 67/193 (34%)
Query: 741 GPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAVA 800
G D +T ++ L+P G TD NV+ P ++ + A + +I + +
Sbjct: 1015 GSDVQTPKRHLKRKLHPVLG----TDQNVAMGKKLPDLNASANDATPSEEKSIAMGAEIN 1070
Query: 801 ALNSELNTNLATAXXXXXXXXXXXXXXMQTKGQSRKTQSGGVTPRRRGKRQALGSPPISD 860
A S L A +T +SR +S G+ RG + S +
Sbjct: 1071 AATSNQEDPLKDAPQTPRSLTSSDRLGGETDAESRLQESSGI----RGNGECSDSTGVGK 1126
Query: 861 VSAGP-----ESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADV 915
+ P E + L + S ++ G+ D Q+ +K + + T
Sbjct: 1127 MCRTPGEDSIEEEEGLSDKRESCQVQTEPLWENGQTDTSFQKHKSKTKHRVTEEETLEKH 1186
Query: 916 AGPDQKPAEQSVR 928
P QKP R
Sbjct: 1187 LRPKQKPKNSKHR 1199
Score = 54 (24.1 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 1942 SDFC-QPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAE--AGDQMDISIMPE-KLP 1997
S+F Q SS +P E DG +KD S S K AE +G S++ + +
Sbjct: 1324 SNFAVQHPSSASPKEKSQDGILKKDGKDSVSEHFSGKVEDAELSSGALTSSSLLAKMRAR 1383
Query: 1998 EHLDIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVE 2036
HL +PA L E G + + + + E +VE
Sbjct: 1384 NHLILPARL----ESESGHVPEASAPLPSSTEHDELLVE 1418
Score = 48 (22.0 bits), Expect = 6.8e-40, Sum P(3) = 6.8e-40
Identities = 56/273 (20%), Positives = 97/273 (35%)
Query: 1209 PGFNSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKA-QAGRIENIANSS 1267
P + E GT +D H H + + + K N A S
Sbjct: 999 PDTSQSTETSAIFAGTGSDVQTPKRHLKRKLHPVLGTDQNVAMGKKLPDLNASANDATPS 1058
Query: 1268 PDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEAPASTEAFEQEK 1327
++KS+ M + A + P++ + R+ + + G ET S S+ +
Sbjct: 1059 -EEKSIAMGAEINAATSNQEDPLKDAPQTPRSLTSSDRLGGETDAESRLQESSGIRGNGE 1117
Query: 1328 VTNTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDA---KVKWKNTP 1384
++++ + +D + + E E T+ K K K+
Sbjct: 1118 CSDSTGVGKMCRTPGEDSIEEEEGLSDKRESCQVQTEPLWENGQTDTSFQKHKSKTKHRV 1177
Query: 1385 LPGEAIVAGIEVF-KPEN-KTDGDSVEKLEDTVDDHSLVKELIHRSPDHSDMVIGNVPGN 1442
E + + KP+N K D+ K E T H LVK+ ++ D+ + V
Sbjct: 1178 TEEETLEKHLRPKQKPKNSKHRRDA--KFEGTRIPH-LVKKRQYQRQDNENE--SEVKER 1232
Query: 1443 TSEDSSKMPLETPLIMKSTEGPSVSMKADDVAD 1475
+++D LE L KS SV MK D + D
Sbjct: 1233 SNDD---YVLEK-LFKKSVGVHSV-MKHDAIMD 1260
Score = 47 (21.6 bits), Expect = 2.1e-40, Sum P(3) = 2.1e-40
Identities = 29/114 (25%), Positives = 49/114 (42%)
Query: 1869 HMGVSHSPVHVVER---EKSEELGLPSLSSATKEEKI-DGSLDKDPDSNLVVLEDSKGSI 1924
H G++ +P R +++ + SSA+ +EK DG L KD + V E G +
Sbjct: 1304 HRGLAGAPAGRKSRFGQKRNSNFAVQHPSSASPKEKSQDGILKKDGKDS--VSEHFSGKV 1361
Query: 1925 GDQMDCCQSGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKE 1978
D SG + +L + + L A+++ S P +S + L S E
Sbjct: 1362 EDAE--LSSGALTSSSLLAKMRARNHLI-LPARLESESGHVPEAS-APLPSSTE 1411
Score = 42 (19.8 bits), Expect = 2.9e-39, Sum P(3) = 2.9e-39
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 919 DQKPAEQSVRVVQSNQPINLPATHDSSS-QPSGSTPAQVPSMD-LGNVASDTKEVLSENS 976
D P+E+ + + IN ++ + + TP + S D LG +D + L E+S
Sbjct: 1054 DATPSEE--KSIAMGAEINAATSNQEDPLKDAPQTPRSLTSSDRLGG-ETDAESRLQESS 1110
Query: 977 SSKG 980
+G
Sbjct: 1111 GIRG 1114
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 323 (118.8 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 78/210 (37%), Positives = 117/210 (55%)
Query: 204 SVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLF 263
S EL +C Y S LH +++T ++ GKL +L +LL LK RV+
Sbjct: 754 SDFELHRLCQQ-Y-SALHEYQLNT--------DVLLDSGKLSLLTQLLNSLKEKGDRVVL 803
Query: 264 FSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGV 323
FS T +LD++E +L ++RY RLDG T DR LID+FN D F+FLLS RAGG+
Sbjct: 804 FSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSDRIGLIDQFNT-DQDIFVFLLSTRAGGL 862
Query: 324 GVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHK 383
G+NL +A+ VI+ D D NP D QA+ R HR+GQ + V V++ + ++E+ + E K
Sbjct: 863 GINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERK 922
Query: 384 LGVANQSITAGFFDNNTSAEDRREYLESLL 413
L + + + +T +D L++ L
Sbjct: 923 LKLEQEMTATQDGEEDTLPDDMTTLLKASL 952
Score = 218 (81.8 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 13 YSREKIVHQ--KFNVLLTTYEYLM-NKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL 69
Y R +I++Q ++N++++TY + N DR K++ Y + DEGH +KN + L
Sbjct: 517 YMRYEILNQIVEYNIIVSTYNLAIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHL 576
Query: 70 KHYQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXX 129
+ +RLLLTGTP +F+SS SQ K F
Sbjct: 577 MAINAKYRLLLTGTPLQNNLLELMSLLNFIMPNMFSSST--SQ-IAKMFSMKSSEEQSSF 633
Query: 130 XXXXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN 189
+I ++PF+LRR+K +V +LP K E++ C S Q+ L +
Sbjct: 634 ERDRITHAKLI------MKPFILRRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHK 687
Query: 190 LGSIGNSKGRSVHNSVMELRNICNHPYLS-QLHAEE 224
L N + R + N +M+LR + NHP L Q + E
Sbjct: 688 LKHSSNGEKRELTNVMMQLRKMSNHPLLHRQFYTTE 723
>UNIPROTKB|E2QSK6 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0032786 "positive regulation of DNA-dependent
transcription, elongation" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0010332 "response to gamma
radiation" evidence=IEA] [GO:0010224 "response to UV-B"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0045494 GO:GO:0010332
GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257 GO:GO:0006283
GO:GO:0008094 GO:GO:0008023 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
OMA:NGEMQIF GO:GO:0000303 EMBL:AAEX03015368 RefSeq:XP_534944.2
UniGene:Cfa.1909 Ensembl:ENSCAFT00000010674 GeneID:477747
KEGG:cfa:477747 NextBio:20853169 Uniprot:E2QSK6
Length = 1486
Score = 480 (174.0 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 112/358 (31%), Positives = 188/358 (52%)
Query: 25 VLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTP 84
+L+T+Y Y+ D +S+ WHY+I+DEGH+I+N + + K +++ HR++L+G+P
Sbjct: 616 ILITSYSYIRLMQD--DISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSP 673
Query: 85 XXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLH 144
+ F + F+ P G ++ + L
Sbjct: 674 MQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LR 731
Query: 145 QVLRPFVLRRLKH--KVENELPEKIERLVRCEASAYQ-KLLMKRVE-ENLGSIGNSKGRS 200
+ P++LRR+K K+ LP+K E+++ C + Q K+ ++ + + I N
Sbjct: 732 DTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNFIDSKEVYRILNGD-MQ 790
Query: 201 VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIV--RLCGKLEMLDRLLPKLKATD 258
+ + ++ LR ICNHP L + + T+ + GK+ +++ LL
Sbjct: 791 IFSGLVALRKICNHPDLFSGGPKNLKTIPDDDEEDQFGYWKRSGKMIVVESLLKIWHKQG 850
Query: 259 HRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSI 318
RVL FS ++LD++E +L ++Y YL++DG T+ R LI ++N+ D+ F+FLL+
Sbjct: 851 QRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNE-DTSIFVFLLTT 909
Query: 319 RAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
R GG+GVNL A+ VII+D DWNP D QA+ RA RIGQK+ V V R T T+EE++
Sbjct: 910 RVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKI 967
Score = 63 (27.2 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 43/191 (22%), Positives = 72/191 (37%)
Query: 1289 PIEKHNEQSRN---QNNPEVKGEETPVSSEAPASTEAFEQEKVTNTSSFVNLADLSSDDK 1345
P++ + RN PE K + P+ E ++ + TS L+ S +
Sbjct: 1085 PLKDAPQTPRNLTGSGGPEEKTKAVPILEELSVTSGRVDCSSSPRTSKMDGLSSEESIHE 1144
Query: 1346 TCSVTPAMETAPGFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVA-GIEVFKPENKTD 1404
++ E+ P+++ E K K K++ L E + KP+N T
Sbjct: 1145 KQGLSDRRESCQAQTEPLQENKESENNFSKHKSKTKHSVLEEETLEQLQRPKSKPKN-TK 1203
Query: 1405 GDSVEKLEDTVDDHSLVKELIHRSPDHSDMVIGNVPGNTSEDSSKMPLETPLIMKSTEGP 1464
+ E T H LVK+ ++ D + TSE S+ + L KS
Sbjct: 1204 HCRDARFEGTRIPH-LVKKRRYQKQD------SEIESETSEQSNDDYVLEKLFKKSVGVH 1256
Query: 1465 SVSMKADDVAD 1475
SV M+ D + D
Sbjct: 1257 SV-MRHDAIMD 1266
Score = 47 (21.6 bits), Expect = 9.1e-40, Sum P(2) = 9.1e-40
Identities = 43/191 (22%), Positives = 77/191 (40%)
Query: 1747 RDGDI-EIFNMEGGPSNALLSSSKDIIAESAKADVVLDEHGKVQLLP--GADNPEGGVIV 1803
+ D+ E+F + P + + + I A + H K +L P GAD+ I
Sbjct: 992 KSNDLYELFTLTS-PGASQSTETSAIFAGTGSEVQTPKLHLKRKLPPAFGADH--NIPIC 1048
Query: 1804 PEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRI-DEPQVDGFSPRSMSGVVDEL 1862
+ N D SSE F + + + + GD + D PQ +PR+++G
Sbjct: 1049 RKFPDSNASTNDTTSSEEKFTAKGAGVNTITSDQ-GDPLKDAPQ----TPRNLTG----- 1098
Query: 1863 VDEAGDHMGVSHSPVHVVEREKSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSKG 1922
G P+ +E E S G SS+ + K+DG ++ + + +G
Sbjct: 1099 --SGGPEEKTKAVPI--LE-ELSVTSGRVDCSSSPRTSKMDGLSSEES------IHEKQG 1147
Query: 1923 SIGDQMDCCQS 1933
+ D+ + CQ+
Sbjct: 1148 -LSDRRESCQA 1157
Score = 46 (21.3 bits), Expect = 9.7e-39, Sum P(3) = 9.7e-39
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 739 SPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSA 798
S GP+ KT P E L+ + G + SS T+ + S ++ + G D +
Sbjct: 1099 SGGPEEKTKAVPILEELSVTSGRVDCS----SSPRTSKMDGLSSEESIHEKQGLSDRRES 1154
Query: 799 VAALNSELNTN 809
A L N
Sbjct: 1155 CQAQTEPLQEN 1165
Score = 45 (20.9 bits), Expect = 9.7e-39, Sum P(3) = 9.7e-39
Identities = 28/106 (26%), Positives = 39/106 (36%)
Query: 891 QDALSQELSNKIQV--QPCGVATSADVAGPDQKPAEQSVRVVQSNQPINLPATHDSSSQP 948
QDAL ++ Q GV T G PA R Q H SS+
Sbjct: 1284 QDALKALRLSRQQCLGASSGVPTWTGHRGISGAPAGIKSRFGQKRNS-KFSVQHPSSASS 1342
Query: 949 SGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILAL-SNMKA 993
VP D + AS+ E++ S G +P +L + M+A
Sbjct: 1343 KEKCQDGVPRKDGKDNASEHFSGKVEDAESSPGALPSSSLLAKMRA 1388
Score = 43 (20.2 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 862 SAGPESKSN----LQSEN-NSGGLRLSKSVSMGKQDALSQELS 899
S GPE K+ L+ + SG + S S K D LS E S
Sbjct: 1099 SGGPEEKTKAVPILEELSVTSGRVDCSSSPRTSKMDGLSSEES 1141
Score = 39 (18.8 bits), Expect = 4.1e-38, Sum P(3) = 4.1e-38
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 868 KSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKIQ 903
+ N +SENN SK S K L +E ++Q
Sbjct: 1163 QENKESENN-----FSKHKSKTKHSVLEEETLEQLQ 1193
Score = 39 (18.8 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 1950 SLAPWEAKIDGSSEKDPVSSQSVLEGSKET 1979
S +P +K+DG S ++ + + L +E+
Sbjct: 1125 SSSPRTSKMDGLSSEESIHEKQGLSDRRES 1154
Score = 37 (18.1 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 1556 ETPLDIKSIGGPIVSMKAADVAD 1578
+TP ++ GGP KA + +
Sbjct: 1091 QTPRNLTGSGGPEEKTKAVPILE 1113
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 468 (169.8 bits), Expect = 3.2e-41, Sum P(3) = 3.2e-41
Identities = 160/561 (28%), Positives = 262/561 (46%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +I+DE HR+KN K L Y H+LLLT
Sbjct: 814 KFHVLLTSYELITI--DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT 871
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP F++ E F + F D + + I
Sbjct: 872 GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----------IK 914
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 915 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGN 974
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL + A E + Y ++R GKL +L ++L LK
Sbjct: 975 QVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKE 1034
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1035 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQGFCFLL 1094
Query: 317 SIRAGG--VGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEE 374
S RAGG + L++++ + D+ + + + +RAHR+GQ + V +RF T +++
Sbjct: 1095 STRAGGPCLWSPLRSSERNV--DSSLSRKTMQKTYSRAHRLGQNKKVNDIRFVT-KSISG 1151
Query: 375 QVRAS--AEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR----ECKKEEXXXXXXXX 428
+ +S A+ ++ + + + G + T + ++E L+ +L+ E K+E
Sbjct: 1152 RSASSQVAQKEMMLTHLVVRPG--GSKTGSMSKQE-LDDILKFGTEELFKDEATEGGDNK 1208
Query: 429 XXXXXXXRSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDLKA 488
+ + +D+ + E E + + L + + +V ++++
Sbjct: 1209 EGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSF-----KVAQYVVREEEMGE 1263
Query: 489 LYEAMKIYDAPKTGVSPNVGVKRKGEHLGALD---TQHYGRGKRAREVRSYEEQWTEEEF 545
E + + V P+ K H ++ G+GKR R+ +Y + E+
Sbjct: 1264 EEEVEREIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRD 1323
Query: 546 EKMCQAES-SDSPKLKEEGLE 565
+ Q+++ SD EEG E
Sbjct: 1324 WQDDQSDNQSDYSVASEEGDE 1344
Score = 87 (35.7 bits), Expect = 3.2e-41, Sum P(3) = 3.2e-41
Identities = 41/147 (27%), Positives = 64/147 (43%)
Query: 2297 EGFSKPVG-SEKESIASAVPLDE--SKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFL 2353
EG G S KE SA P E + D EV + + P+EA P +
Sbjct: 1531 EGIKAEEGASNKEQGESAEPEKELSASANDTEVPMEQCAQPAETA----PQEAKSPVNST 1586
Query: 2354 AAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVI 2413
A+E+K E KE + ++ESK ++ V+ ENTSE PP++
Sbjct: 1587 EADEKKEEPEVKERTDEPM-EVESKGTSTD----VEKVEDRAPTENTSE------PPVIT 1635
Query: 2414 AEDKTENEIEE--DPVV--NSVAVEES 2436
++K E + ++ D V+ N ++ES
Sbjct: 1636 LDEKDEKKDDDKRDVVMLQNGEMLKES 1662
Score = 72 (30.4 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 35/127 (27%), Positives = 56/127 (44%)
Query: 2247 ASSIPRGESKGPDAE----ANNI-IDAEGGGNMRQTVPQDLGLPLSSSDVEEEKIEGFSK 2301
AS+ +GES P+ E AN+ + E +T PQ+ P++S++ +E+K E
Sbjct: 1539 ASNKEQGESAEPEKELSASANDTEVPMEQCAQPAETAPQEAKSPVNSTEADEKKEE---- 1594
Query: 2302 PVGSEKESIASAVPLDESKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNE 2361
P E+ V ESKG +V +E P ++ P L ++EK +
Sbjct: 1595 PEVKERTDEPMEV---ESKGTSTDVEK---VEDRA----PTENTSEPPVITLDEKDEKKD 1644
Query: 2362 CSDKEPV 2368
DK V
Sbjct: 1645 -DDKRDV 1650
Score = 62 (26.9 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 26/100 (26%), Positives = 40/100 (40%)
Query: 1945 CQPSSSLAPWEAKID-GSSEKDPVSSQ-SVLEGSKET--VAEAGDQMDISIMPEKLPEHL 2000
C + AP EAK S+E D + V E + E V G D+ + ++ P
Sbjct: 1568 CAQPAETAPQEAKSPVNSTEADEKKEEPEVKERTDEPMEVESKGTSTDVEKVEDRAPTEN 1627
Query: 2001 DIPASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQ 2040
+ T +EK E +KD D E + E+ D+
Sbjct: 1628 TSEPPVITLDEKDE--KKDDDKRDVVMLQNGEMLKESADE 1665
Score = 57 (25.1 bits), Expect = 3.4e-39, Sum P(2) = 3.4e-39
Identities = 26/111 (23%), Positives = 40/111 (36%)
Query: 1201 TPTVETPPP--GFNSP----NENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENK 1254
TP PPP G + N+ GE + + S + T V A E E K
Sbjct: 1522 TPA-PVPPPEEGIKAEEGASNKEQGESAEPEKELSASANDTEVPMEQCAQPAETAPQEAK 1580
Query: 1255 AQAGRIE-NIANSSPDDKSLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPE 1304
+ E + P+ K P +E G +EK +++ +N E
Sbjct: 1581 SPVNSTEADEKKEEPEVKERTDEP-MEVESKGTSTDVEKVEDRAPTENTSE 1630
Score = 52 (23.4 bits), Expect = 3.4e-38, Sum P(3) = 3.4e-38
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1825 SSLVLQDKASEAEIGDRIDEP-QVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVERE 1883
+S +K E E+ +R DEP +V+ + S V+++ D A S PV ++ E
Sbjct: 1584 NSTEADEKKEEPEVKERTDEPMEVES---KGTSTDVEKVEDRAPTE-NTSEPPVITLD-E 1638
Query: 1884 KSEE 1887
K E+
Sbjct: 1639 KDEK 1642
Score = 51 (23.0 bits), Expect = 3.4e-38, Sum P(3) = 3.4e-38
Identities = 17/67 (25%), Positives = 27/67 (40%)
Query: 738 PSPGPDPKTNEQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSS 797
P+P P P+ + + + N GES + +S A D+ P Q P
Sbjct: 1523 PAPVPPPEEGIKAEEGASNKEQGESAEPEKELS----ASANDTEVPMEQCAQPAETAPQE 1578
Query: 798 AVAALNS 804
A + +NS
Sbjct: 1579 AKSPVNS 1585
Score = 46 (21.3 bits), Expect = 4.8e-38, Sum P(2) = 4.8e-38
Identities = 29/116 (25%), Positives = 40/116 (34%)
Query: 1303 PEVKGEETP-VSSEAPASTEAFEQEKVTNTSSFVNLAD----LSSDDKTCSVTPAMETAP 1357
P G+ P + P E + E+ + A+ LS+ V P
Sbjct: 1512 PSTPGDTQPNTPAPVPPPEEGIKAEEGASNKEQGESAEPEKELSASANDTEVPMEQCAQP 1571
Query: 1358 GFDIPIEKGVEQSGTEIDAKVKWKNTPLPGEAIVAGIEVFKPENKTDGDSVEKLED 1413
P E + TE D K K P E +EV E+K VEK+ED
Sbjct: 1572 AETAPQEAKSPVNSTEADEK---KEEPEVKERTDEPMEV---ESKGTSTDVEKVED 1621
Score = 46 (21.3 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 527 GKRAREVRSYEEQWTEEEFEKMCQAESSDSPKLKEEGLEKSLPTVVSSSAPAVYSTE 583
G +A E S +EQ E EK A ++D+ E+ + + + +P V STE
Sbjct: 1532 GIKAEEGASNKEQGESAEPEKELSASANDTEVPMEQCAQPAETAPQEAKSP-VNSTE 1587
Score = 46 (21.3 bits), Expect = 1.4e-37, Sum P(3) = 1.4e-37
Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 2139 PVNSSVTVEDSKGFEA-EACDQ-LHV-LRGGGVVAETVQEEEKTELSCEKQPIGSSVDDE 2195
PVNS+ E + E E D+ + V +G E V++ TE + E I DE
Sbjct: 1582 PVNSTEADEKKEEPEVKERTDEPMEVESKGTSTDVEKVEDRAPTENTSEPPVITLDEKDE 1641
Query: 2196 SKGPEVEPCVQMDVRGDGIVPETVPE 2221
K + V + G+ ++ E+ E
Sbjct: 1642 KKDDDKRDVVMLQ-NGE-MLKESADE 1665
Score = 45 (20.9 bits), Expect = 3.2e-41, Sum P(3) = 3.2e-41
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 918 PDQKPAEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASD 967
P+ E++ ++ Q + P T + +TPA VP + G A +
Sbjct: 1488 PELAEIEENKKLSQPSSPSPKTPTPSTPGDTQPNTPAPVPPPEEGIKAEE 1537
Score = 44 (20.5 bits), Expect = 7.9e-38, Sum P(2) = 7.9e-38
Identities = 24/93 (25%), Positives = 35/93 (37%)
Query: 1382 NTPLPGEAIVAGIEVFK-PENKTDGDSVEKLEDTVDDHSLVKELIHRSPDHS-DMVIGNV 1439
NTP P GI+ + NK G+S E KEL + D M
Sbjct: 1521 NTPAPVPPPEEGIKAEEGASNKEQGESAEP----------EKELSASANDTEVPMEQCAQ 1570
Query: 1440 PGNTSEDSSKMPLETPLIMKSTEGPSVSMKADD 1472
P T+ +K P+ + + E P V + D+
Sbjct: 1571 PAETAPQEAKSPVNSTEADEKKEEPEVKERTDE 1603
Score = 40 (19.1 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 19/89 (21%), Positives = 37/89 (41%)
Query: 2003 PASLATPEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGG-ATVMEKSSEDLATP 2061
PA + PEE + E + +P++ + + + V + A E + ++ +P
Sbjct: 1523 PAPVPPPEEGIKAEEGASNKEQGESAEPEKELSASANDTEVPMEQCAQPAETAPQEAKSP 1582
Query: 2062 PLSLANEEEMIEGFDNDPTGISMAVMDSK 2090
S +E+ E + T M V +SK
Sbjct: 1583 VNSTEADEKKEEPEVKERTDEPMEV-ESK 1610
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 484 (175.4 bits), Expect = 5.9e-41, Sum P(2) = 5.9e-41
Identities = 116/259 (44%), Positives = 154/259 (59%)
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGR 199
+ L+++L+PF+LRR+K +V ELP K E ++ SA QK K + ++L + N +
Sbjct: 250 SELYKLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENEMAK 309
Query: 200 SV--HNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 257
V N + +LR +HPYL E I H ++ GKL +LD+LL L +
Sbjct: 310 KVKLQNVLSQLRKCVDHPYLFD-GVEPEPFEIGDH----LIEASGKLHLLDKLLAFLYSK 364
Query: 258 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 317
HRVL FS MT++LD+++DYL ++ Y Y R+DG G +R I F QQ P F FL S
Sbjct: 365 GHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQ--PIFTFL-S 421
Query: 318 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 377
RAGGVG+NL AADTVI FD+D+NPQ DLQA ARAHRIGQ + V V+R TVEE V
Sbjct: 422 TRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVY 481
Query: 378 ASAEHKLGVANQSITAGFF 396
A KL + N I G F
Sbjct: 482 RKAASKLQLTNTIIEGGHF 500
Score = 360 (131.8 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 97/291 (33%), Positives = 145/291 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
+F+VLLTTYE + D L W +++DE HR+KN S L+ L + LLLT
Sbjct: 147 RFHVLLTTYEICLK--DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLT 204
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSS--EDFSQWFNKPFESNGDNSPDXXXXXXXXXXXI 139
GTP +F+ EDF Q + + E +++ +
Sbjct: 205 GTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRY-QDIEKESESASE------------ 251
Query: 140 INRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG 198
L+++L+PF+LRR+K +V ELP K E ++ SA QK K + ++L + N
Sbjct: 252 ---LYKLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENEMA 308
Query: 199 RSV--HNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKA 256
+ V N + +LR +HPYL E I H ++ GKL +LD+LL L +
Sbjct: 309 KKVKLQNVLSQLRKCVDHPYLFD-GVEPEPFEIGDH----LIEASGKLHLLDKLLAFLYS 363
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
HRVL FS MT++LD+++DYL ++ Y Y R+DG G +R I F QQ
Sbjct: 364 KGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQ 414
Score = 44 (20.5 bits), Expect = 5.9e-41, Sum P(2) = 5.9e-41
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 1940 NLSDFCQPSSSLAPWEAKIDGSSE---KDPVSSQSVLEGSKETVAEAG 1984
N FC PS P + + + S++ +DP S+ T +AG
Sbjct: 682 NYQSFCLPSEESEPEDGEDESSAQLEYEDPDSTSIRYVSGDVTHPQAG 729
Score = 42 (19.8 bits), Expect = 9.6e-41, Sum P(2) = 9.6e-41
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 737 IPSPGPDPKTNEQPQSESLNPSGGESTA---TDGNVSSIPTAPVPDSV 781
+PS +P+ E S L +ST+ G+V+ P A D+V
Sbjct: 688 LPSEESEPEDGEDESSAQLEYEDPDSTSIRYVSGDVTH-PQAGAEDAV 734
>DICTYBASE|DDB_G0281441 [details] [associations]
symbol:ercc6 "DNA excision repair protein 6"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006289 "nucleotide-excision repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281441 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000041 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006289 GO:GO:0008094 KO:K10841
RefSeq:XP_640679.1 ProteinModelPortal:Q54TY2 STRING:Q54TY2
EnsemblProtists:DDB0232361 GeneID:8623063 KEGG:ddi:DDB_G0281441
InParanoid:Q54TY2 OMA:NIHKERW ProtClustDB:CLSZ2736745
Uniprot:Q54TY2
Length = 1655
Score = 498 (180.4 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 115/376 (30%), Positives = 201/376 (53%)
Query: 17 KIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSH 76
K + +K ++LLTT++ + + ++ L K W Y+I+DEGH+I+N ++ K Q+ H
Sbjct: 895 KKIAEKGHILLTTFDSI--RINQEILLKYHWEYVILDEGHKIRNPDAEITLSCKQLQTPH 952
Query: 77 RLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXX 136
R++L+G+P + F F+ P G +
Sbjct: 953 RVILSGSPIQNKLTELWSLFDFVFPGRLGTLPIFKSQFSLPISVGGFANASPIQVQAAYK 1012
Query: 137 XXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQ-KLLMKRVEEN-LGSIG 194
+ L ++ P++LRR+K V LP K E+++ C + +Q KL ++ ++ N + S+
Sbjct: 1013 CAVA--LRDLISPYMLRRVKSDVLKSLPSKNEQVLMCPLTPFQEKLYLEFLDSNDIKSVL 1070
Query: 195 NSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKL 254
+ + +++ + L+ ICNHP + + A + D P Y + KL++++ +LP
Sbjct: 1071 DGRRNALYG-IDILKKICNHPDILHMDASDEDR--PHDY--GNIERSAKLKVVETILPLW 1125
Query: 255 KATDHRVLFFSTMTRLLDVMEDYLTFK-QYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 313
+VL F ++LD++E Y+ Q+ YLR+DG TS R L+++FN D FI
Sbjct: 1126 FKQGDKVLLFCQTRQMLDIVEQYIRDSTQFNYLRMDGTTSIRQRQCLVEQFNI-DPSLFI 1184
Query: 314 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 373
FLL+ + GG+G+NL A+ VI+FD DWNP D+QA+ R +RIGQK+ V + R T+ T+E
Sbjct: 1185 FLLTTKVGGLGLNLTGANRVILFDPDWNPSTDMQARERVYRIGQKKAVTIYRLITLGTIE 1244
Query: 374 EQVRASAEHKLGVANQ 389
E++ +K + N+
Sbjct: 1245 EKIYHRQIYKQFLTNK 1260
Score = 41 (19.5 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 1278 NLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPV 1312
N E P + +K++ +++N NN + +P+
Sbjct: 1299 NSEILPEHMNDKNDKNSIKNKNNNNNSILNSSSPL 1333
Score = 39 (18.8 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 1293 HNEQSRNQNNPE--VKGEETPVSSEAPASTEAFEQEKVTNT 1331
+N QS N NN SS ST E+E+ T
Sbjct: 1543 NNNQSNNSNNNNNNKNNNNNRFSSSKLLSTLNAEEEETAKT 1583
>UNIPROTKB|E1BYA8 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000303 "response to superoxide" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006290 "pyrimidine dimer
repair" evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010332 "response to gamma radiation" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 OMA:NGEMQIF GO:GO:0000303
EMBL:AADN02027759 EMBL:AADN02027760 IPI:IPI00592927
Ensembl:ENSGALT00000010107 Uniprot:E1BYA8
Length = 1498
Score = 486 (176.1 bits), Expect = 8.0e-41, Sum P(3) = 8.0e-41
Identities = 115/361 (31%), Positives = 185/361 (51%)
Query: 25 VLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTP 84
+L+T+Y Y+ D + WHY+I+DEGH+I+N + + K +++ HR++L+G+P
Sbjct: 615 ILITSYSYIRLMQDN--IHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSP 672
Query: 85 XXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIINRLH 144
+ F + F+ P G ++ + L
Sbjct: 673 MQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LR 730
Query: 145 QVLRPFVLRRLKH--KVENELPEKIERLVRCEASAYQKLLMKRV--EENLGSIGNSKGRS 200
+ P++LRR+K K+ LP+K E+++ C + Q+ + + + + I N
Sbjct: 731 DAINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFIDSKEVYQILNGD-MQ 789
Query: 201 VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRL-----CGKLEMLDRLLPKLK 255
V + ++ LR ICNHP L ++ +P L + GK+ +++ LL
Sbjct: 790 VFSGLVALRKICNHPDLFS-GGPKILKCVPDADLEEADQFGYWKRSGKMIVVESLLKIWH 848
Query: 256 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 315
HRVLFF+ ++L ++E +L + Y YLR+DG T+ R LI ++N+ D FIFL
Sbjct: 849 KQGHRVLFFTQSRQMLQILEVFLRDRNYSYLRMDGTTTIASRQPLITRYNE-DKSIFIFL 907
Query: 316 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 375
L+ R GG+GVNL AD VII+D DWNP D QA+ RA RIGQK+ V V R T T+EE+
Sbjct: 908 LTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 967
Query: 376 V 376
+
Sbjct: 968 I 968
Score = 62 (26.9 bits), Expect = 8.0e-41, Sum P(3) = 8.0e-41
Identities = 36/159 (22%), Positives = 60/159 (37%)
Query: 878 GGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGP----DQKP-AEQSVRVVQS 932
GGL L KS S + S L+ + TS + G DQ A+ +
Sbjct: 1047 GGLHLKKSSSPKYSKSSSSHLTRHRANSSEAIETSEEAKGNLETFDQNSYAKDNAETATD 1106
Query: 933 NQPINLPATHDSSSQP----SGSTPAQVPSMDLGNVASDTKEVLSENSSSKGGVIPILAL 988
+N + +S + S S P S + V + EV +EN+ ++ A
Sbjct: 1107 INSVN-KSKQESLERADISLSQSLPGGAGSSENAKVTEEEHEVANENAEGDFSLLCGAAG 1165
Query: 989 SNMKAVERVNIQSFEEK--ACTNASKSKATLPALDSITE 1025
S K V++ + CT+ +K + + + DS E
Sbjct: 1166 SQEKQVDKTEDGQLDNNHYKCTSKTKHRVDMLSHDSHKE 1204
Score = 48 (22.0 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 1967 VSSQSVLEGSKETVAEAGDQMDISIMPEKLPEHLDIPA 2004
+SS V +G++ + AG D+ + +L L+ PA
Sbjct: 1003 LSSPDVSQGTETSAIFAGTGSDVQVPKHQLKRKLERPA 1040
Score = 43 (20.2 bits), Expect = 8.0e-41, Sum P(3) = 8.0e-41
Identities = 19/69 (27%), Positives = 28/69 (40%)
Query: 1098 SGPSIPDGSAVFDAKLNQHSQNKSRDSFGSKTISLRSKQETADVNDVARVMKEIFSETCS 1157
SG S F ++ Q +N S S +S K + AD V K +
Sbjct: 1316 SGLSGAPSGVKFRSRFGQ-KRNPMLLSSHSTCVSPMKKCKDADTMKKENVKKNSSNGHFD 1374
Query: 1158 SKAKTGDSS 1166
K++TG+SS
Sbjct: 1375 GKSETGESS 1383
>CGD|CAL0000882 [details] [associations]
symbol:orf19.607 species:5476 "Candida albicans" [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000882 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000108 HOGENOM:HOG000170952 KO:K10841
RefSeq:XP_714234.1 ProteinModelPortal:Q59XB8 STRING:Q59XB8
GeneID:3644142 KEGG:cal:CaO19.607 Uniprot:Q59XB8
Length = 1055
Score = 484 (175.4 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 124/369 (33%), Positives = 195/369 (52%)
Query: 19 VHQKFNVLLTTYEYLM--NKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSH 76
V +K +VL+TTY L +KH P+ +W Y+++DEGH+I+N ++ K ++ +
Sbjct: 399 VMEKGHVLVTTYVGLRIYSKHILPR----EWGYVVLDEGHKIRNPDSDISLTCKKIKTVN 454
Query: 77 RLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXX 136
R++L+GTP + F Q F+ P G + +
Sbjct: 455 RIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFQQEFSIPINIGGYANSNNLQVKTAYK 514
Query: 137 XXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV--EENLGSIG 194
++ L ++ P++LRRLK V +LP+K E ++ + + Q+ L + E+L SI
Sbjct: 515 CAVV--LRDLISPYMLRRLKSDVAQDLPKKNEMVLFVKLTKIQQELYESFLQSEDLESIL 572
Query: 195 NSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIP-KHYLPPIVRLCGKLEMLDRLLPK 253
K R+V V LR ICNHP L DTL+ K+Y P GK+++L LL
Sbjct: 573 KGK-RNVLMGVDILRKICNHPDLVYR-----DTLMKRKNYGDPAKS--GKMQVLKNLLRL 624
Query: 254 LKATDHRVLFFSTMTRLLDVMEDY------LTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
++ +H+ L F ++LD++E + + + YLR+DG T R L+D FNQ
Sbjct: 625 WQSENHKTLLFCQTRQMLDILEKFVANLSLINGGDFNYLRMDGSTPISKRQMLVDAFNQ- 683
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
D +FLL+ + GG+GVNL AD VII+D DWNP D+QA+ RA R+GQKRD+ + R
Sbjct: 684 DPDMHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKRDITIYRLM 743
Query: 368 TVQTVEEQV 376
T ++EE++
Sbjct: 744 TTGSIEEKI 752
Score = 45 (20.9 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 12/57 (21%), Positives = 23/57 (40%)
Query: 1832 KASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEEL 1888
K + E GD D +S + ++ + ++G H + H + +EK L
Sbjct: 844 KLDKFEDGDHNDGDGDSTYSANEDNRIMSSIFAQSGVHSTLQHDDIISGSKEKESSL 900
Score = 37 (18.1 bits), Expect = 8.9e-40, Sum P(2) = 8.9e-40
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 2011 EKTEGSEKDPDSSFAAQED 2029
E + ++ D DS+++A ED
Sbjct: 849 EDGDHNDGDGDSTYSANED 867
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 481 (174.4 bits), Expect = 1.7e-40, Sum P(3) = 1.7e-40
Identities = 115/261 (44%), Positives = 155/261 (59%)
Query: 139 IINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSK 197
+++ LHQVL+PF+LRR+K +V ELP+K E +V SA QK K + +L + +
Sbjct: 235 LVDELHQVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQ 294
Query: 198 GRSVH--NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLK 255
N +M+LR +HPYL E + +H +V GKL +LD +L L+
Sbjct: 295 STKTRLLNVLMQLRKCVDHPYLFD-GVEPEPFEMGEH----LVEASGKLSLLDSMLAYLQ 349
Query: 256 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 315
H VL FS MTR+LD+++DYL ++ Y Y RLDG G +R I F+ +D FIFL
Sbjct: 350 EGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTKD--VFIFL 407
Query: 316 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 375
LS +AGGVG+NL AADTVI D D+NPQ DLQA ARAHRIGQ R V V+R T+EE
Sbjct: 408 LSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEI 467
Query: 376 VRASAEHKLGVANQSITAGFF 396
+ + A KL + + I G F
Sbjct: 468 IYSRAVSKLRLTDTVIEEGRF 488
Score = 365 (133.5 bits), Expect = 3.3e-26, Sum P(4) = 3.3e-26
Identities = 99/297 (33%), Positives = 147/297 (49%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
+F+VLLTTYE + D L +W +++DE HR+KN L+ LK + R+LLT
Sbjct: 134 RFHVLLTTYEMCLK--DARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLT 191
Query: 82 GTPXXXXXXXXXXXXXXXXXXIF--NSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXI 139
GTP +F + EDF + ++ P +
Sbjct: 192 GTPIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAY-----ADIQTEP-----------AL 235
Query: 140 INRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG 198
++ LHQVL+PF+LRR+K +V ELP+K E +V SA QK K + +L + +
Sbjct: 236 VDELHQVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQS 295
Query: 199 RSVH--NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKA 256
N +M+LR +HPYL E + +H +V GKL +LD +L L+
Sbjct: 296 TKTRLLNVLMQLRKCVDHPYLFD-GVEPEPFEMGEH----LVEASGKLSLLDSMLAYLQE 350
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 313
H VL FS MTR+LD+++DYL ++ Y Y RLDG G +R I F+ +D F+
Sbjct: 351 GGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTKDVFIFL 407
Score = 53 (23.7 bits), Expect = 1.7e-40, Sum P(3) = 1.7e-40
Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 941 THDSSSQPSGSTPAQVP--SMDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERV- 997
T SSS+P+ S+P++ P S N TK +S +G P LA M+ V
Sbjct: 884 TTPSSSKPAASSPSESPHSSSPPANREGLTKSAELSTTSHEGPGAPGLA-DFMRGVHVYF 942
Query: 998 -NIQSFEEKACT 1008
N+ + E+K T
Sbjct: 943 YNMAATEKKKLT 954
Score = 50 (22.7 bits), Expect = 3.4e-40, Sum P(3) = 3.4e-40
Identities = 16/55 (29%), Positives = 21/55 (38%)
Query: 1492 TECSTVSVKTDVGNHPQNVEPTSASPERSGPQNSAVGFCDKSEIPSMEAEVAKCP 1546
T ST S T + P P S SP S P + G +E+ + E P
Sbjct: 876 TVSSTASTTTPSSSKPAASSP-SESPHSSSPPANREGLTKSAELSTTSHEGPGAP 929
Score = 44 (20.5 bits), Expect = 1.7e-40, Sum P(3) = 1.7e-40
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 872 QSENNSGGLRLSKSVSMGKQDALSQELSN 900
Q+++ + GL+LS+ + G LS E S+
Sbjct: 493 QAQSAASGLQLSEILKFGVDKLLSSEESS 521
Score = 44 (20.5 bits), Expect = 7.2e-39, Sum P(4) = 7.2e-39
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 1190 KQSSDDKTCSVTPTVETPP---PGFNSPNENP 1218
++ S T S T + TP P +SP+E+P
Sbjct: 869 RRGSSHATVSSTASTTTPSSSKPAASSPSESP 900
Score = 43 (20.2 bits), Expect = 3.8e-40, Sum P(2) = 3.8e-40
Identities = 31/143 (21%), Positives = 58/143 (40%)
Query: 1916 VLEDSKGSIGDQMDCCQSGVVVPENLS---D--FCQPSSSLAPWEAKIDGSSEKDPVSSQ 1970
V+E+ + S+ DQ SG+ + E L D SS+ + ++ +D Q
Sbjct: 482 VIEEGRFSLLDQAQSAASGLQLSEILKFGVDKLLSSEESSVQDVDLQLILGQSRD---GQ 538
Query: 1971 SVLEGSKETVAEAGDQMDISIMPEKLP---EHLDIPASLATPEEKTEGSEKDPDSSFAAQ 2027
+ + + E+ ++ D + + E D + +EKT E + FA
Sbjct: 539 WLTDEEHAKLNESNEEEDEDMEGQNHMYYFEGKDYSKDPSAEDEKT--FELLLEKQFAEM 596
Query: 2028 EDPKESVVEAGDQMGVSLGGATV 2050
ED ++ ++ GVSL G +
Sbjct: 597 EDAEKEGRALRNKAGVSLSGPLI 619
Score = 43 (20.2 bits), Expect = 1.8e-39, Sum P(3) = 1.8e-39
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 1008 TNASKSKATLPALDSITE-PYTGS--TNTEGI------SNTIHHVPGA 1046
T S SK PA S +E P++ S N EG+ S T H PGA
Sbjct: 884 TTPSSSK---PAASSPSESPHSSSPPANREGLTKSAELSTTSHEGPGA 928
Score = 40 (19.1 bits), Expect = 7.8e-40, Sum P(2) = 7.8e-40
Identities = 15/49 (30%), Positives = 18/49 (36%)
Query: 523 HYGRGKRAREVRSYEEQWTEEEFEKMCQAES----SDSPKLKEEGLEKS 567
+Y RG V S T + + S S SP EGL KS
Sbjct: 867 YYRRGSSHATVSSTASTTTPSSSKPAASSPSESPHSSSPPANREGLTKS 915
Score = 40 (19.1 bits), Expect = 7.2e-39, Sum P(4) = 7.2e-39
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1309 ETPVSSEAPASTEAFEQEKVTNTSS 1333
E+P SS PA+ E + +T+S
Sbjct: 898 ESPHSSSPPANREGLTKSAELSTTS 922
Score = 39 (18.8 bits), Expect = 4.8e-39, Sum P(3) = 4.8e-39
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 2005 SLATPEEKTEGSEKDPD 2021
SL P +EG + +PD
Sbjct: 677 SLCLPRVDSEGEDMEPD 693
Score = 39 (18.8 bits), Expect = 4.8e-39, Sum P(3) = 4.8e-39
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 1525 SAVGFCDKSEIPSMEAEVAKCPSDAIVNNLLETPLDIK 1562
+A+G +S+ P + E+A D + N+L P+D K
Sbjct: 746 TALGL--RSDEPRKQYELAGDMKDLELGNVLLFPVDDK 781
>ASPGD|ASPL0000048785 [details] [associations]
symbol:AN1956 species:162425 "Emericella nidulans"
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
Length = 1443
Score = 494 (179.0 bits), Expect = 2.0e-40, Sum P(3) = 2.0e-40
Identities = 137/410 (33%), Positives = 212/410 (51%)
Query: 24 NVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGT 83
+V++T+YE +++ R LS+I W +I+DEG R+K+ ++ L + ++L+TGT
Sbjct: 711 HVVITSYETMVDDSCRKVLSRIPWAGLIVDEGQRLKSDKSQIYEGLSKMKFPFKVLMTGT 770
Query: 84 PXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNK-PFESNGDNSPDXXXXXXXXXXXIINR 142
P + N++++ FN F N+ + I
Sbjct: 771 P------------------LQNNTKEL---FNLLQFCDQSKNAEELEEKYGTLSKENIPE 809
Query: 143 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV--------------EE 188
LH+++RPF LRR K +V LP ++ +V S QK L K + E
Sbjct: 810 LHELIRPFFLRRTKAQVLTFLPPVVQIIVPVTMSVLQKKLYKSILAKNTQLIKAIFQRNE 869
Query: 189 NLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLD 248
+ ++ +++N +M+LR HP++ EE T P+ +V GKL++L+
Sbjct: 870 EDQPLKQTERHNLNNILMQLRKCLCHPFIFSKAIEE-RTDDPEVAHRNLVDAAGKLQLLE 928
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LPKL+A HRVL FS LDVMED+L + RLDG + ++ +ID +N ++
Sbjct: 929 LMLPKLQARGHRVLVFSQFLENLDVMEDFLDGLGLPHRRLDGRMTSLEKQRMIDDYNAEN 988
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
SP+F FLLS R+GGVG+NL ADTVII D D+NP D+QA +RAHRIGQK VLV +
Sbjct: 989 SPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPHQDMQALSRAHRIGQKNKVLVFQLMI 1048
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKK 418
+ EE++ K+ + + I D + +D E LES+LR K
Sbjct: 1049 RGSAEEKIMQIGRKKMVLDHVLI-----DRMAAEDDDGEDLESILRHGAK 1093
Score = 51 (23.0 bits), Expect = 2.0e-40, Sum P(3) = 2.0e-40
Identities = 25/101 (24%), Positives = 42/101 (41%)
Query: 872 QSENNSGGLRLSKSVSMGKQDALSQELSNKIQVQPCGVATSADVAGPDQK-PAEQSVRVV 930
QS + + L+K G + L+Q K + P A+ P P + S+ +
Sbjct: 1347 QSNEDKHLVALAKKYVYGIKGDLAQRERRKSRKGPAADASINSTKTPTSSVPPKASI--L 1404
Query: 931 QSNQPINLPATHDSSSQPSGSTPAQVPSMDLGNVASDTKEV 971
+ QP+ + T D +G PA PS G+ +D K +
Sbjct: 1405 PTGQPV-IDITEDQYESSNGQ-PA--PSGIEGSNTNDRKRI 1441
Score = 41 (19.5 bits), Expect = 2.0e-40, Sum P(3) = 2.0e-40
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 514 EHLGALDTQHYGRGKRAREVRS 535
EH G HYG+ + ++S
Sbjct: 1313 EHCGLCGLAHYGQARTCPHLKS 1334
Score = 39 (18.8 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 940 ATHDSSSQPSGSTPAQVPSMDLGNVASDTKEVLSENSSSK 979
A+ +S+ P+ S P + + G D E E+S+ +
Sbjct: 1385 ASINSTKTPTSSVPPKASILPTGQPVIDITEDQYESSNGQ 1424
>TAIR|locus:2054011 [details] [associations]
symbol:CHR8 "chromatin remodeling 8" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0010332 "response to
gamma radiation" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0010332 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AC005724 HOGENOM:HOG000170952 KO:K10841 IPI:IPI00524515
PIR:C84568 RefSeq:NP_179466.1 UniGene:At.39947
ProteinModelPortal:Q9ZV43 SMR:Q9ZV43 STRING:Q9ZV43 PaxDb:Q9ZV43
PRIDE:Q9ZV43 EnsemblPlants:AT2G18760.1 GeneID:816391
KEGG:ath:AT2G18760 TAIR:At2g18760 InParanoid:Q9ZV43 OMA:TETSNIF
PhylomeDB:Q9ZV43 ProtClustDB:CLSN2683061 ArrayExpress:Q9ZV43
Genevestigator:Q9ZV43 Uniprot:Q9ZV43
Length = 1187
Score = 491 (177.9 bits), Expect = 2.7e-40, Sum P(2) = 2.7e-40
Identities = 149/532 (28%), Positives = 243/532 (45%)
Query: 17 KIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSH 76
++++ + +L+TTYE L + + KL I+W Y ++DEGHRI+N + + K Q+ H
Sbjct: 511 RVLNSESGLLITTYEQLRLQGE--KLLNIEWGYAVLDEGHRIRNPNSDITLVCKQLQTVH 568
Query: 77 RLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXX 136
R+++TG P F F+ P G +
Sbjct: 569 RIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQVSTAYR 628
Query: 137 XXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKR--VEENLGSIG 194
++ L ++ P++LRR+K V L +K E ++ C + Q+ + + I
Sbjct: 629 CAVV--LRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLASSEVEQIF 686
Query: 195 NSKGRSVHNSVMELRNICNHP-YLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPK 253
+ S++ + +R ICNHP L + H+ + P + P GK++++ +L
Sbjct: 687 DGNRNSLYG-IDVMRKICNHPDLLEREHSHQN----PDYGNP---ERSGKMKVVAEVLKV 738
Query: 254 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 313
K HRVL FS ++LD++E +L +Y Y R+DG T R ALID+FN + F+
Sbjct: 739 WKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSED-MFV 797
Query: 314 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 373
F+L+ + GG+G NL A+ VIIFD DWNP D+QA+ RA RIGQK+DV V R T T+E
Sbjct: 798 FVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIE 857
Query: 374 EQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEXXXXXXXXXXXXX 433
E+V +K + N+ + A D ++ +L K++
Sbjct: 858 EKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLF--IL----KDDGDSNASTETSNIF 911
Query: 434 XXRSESEIDVFE-SVDKQRREEEMATWRKLIRGLG--TDGEPLPPLPSRLVTDDD-LKAL 489
+E EI++ DK+ + K G TD E + + + LK+L
Sbjct: 912 SQLAE-EINIVGVQSDKKPESDTQLALHKTAEGSSEQTDVEMTDKTGEAMDEETNILKSL 970
Query: 490 YEAMKIYDAPKTGVSPNVG---VKRKGEHLGALDTQHYGRGKR-AREVRSYE 537
++A I+ A N K + EH + Q R +R +RS E
Sbjct: 971 FDAHGIHSAVNHDAIMNANDEEEKMRLEHQASQVAQRAAEALRQSRMLRSRE 1022
Score = 37 (18.1 bits), Expect = 2.7e-40, Sum P(2) = 2.7e-40
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 748 EQPQSESLNPSGGESTATDGNVSSIPTAPVPDSVSPSAVKGQSGTIDPSSAV 799
EQPQS + SG S V S+ + + S V+ + G+ D +S V
Sbjct: 1100 EQPQSSFPSSSGSSS-----RVGSLQPEVLIRKIC-SFVQQKGGSADTTSIV 1145
>UNIPROTKB|E1BFL2 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009636 "response
to toxic substance" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008023 "transcription elongation factor complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0007256
"activation of JNKK activity" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000303 "response to superoxide" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008630
GO:GO:0005730 GO:GO:0006284 GO:GO:0003677 GO:GO:0009636
GO:GO:0003682 GO:GO:0045494 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 OMA:NGEMQIF GO:GO:0000303
EMBL:DAAA02062232 EMBL:DAAA02062233 EMBL:DAAA02062234
EMBL:DAAA02062235 IPI:IPI00733931 Ensembl:ENSBTAT00000046144
Uniprot:E1BFL2
Length = 1482
Score = 482 (174.7 bits), Expect = 4.3e-40, Sum P(2) = 4.3e-40
Identities = 117/375 (31%), Positives = 197/375 (52%)
Query: 13 YSREKIVH---QKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL 69
+ +EK+V + +L+T+Y Y+ D +S+ WHY+I+DEGH+I+N + +
Sbjct: 596 HKKEKLVRDIARCHGILITSYSYIRLMQD--DISRHDWHYVILDEGHKIRNPNAAVTLAC 653
Query: 70 KHYQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXX 129
K +++ HR++L+G+P + F + F+ P G ++
Sbjct: 654 KQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPV 713
Query: 130 XXXXXXXXXIINRLHQVLRPFVLRRLKH--KVENELPEKIERLVRCEASAYQ-KLLMKRV 186
+ L + P++LRR+K K+ LP+K E+++ C + Q K+ +
Sbjct: 714 QVKTAYKCACV--LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFI 771
Query: 187 E-ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP----IVRLC 241
+ + + I N + + + ++ LR ICNHP L + + IP L +
Sbjct: 772 DSKEVYRILNGE-MQIFSGLVALRKICNHPDLFSGGPKNLKG-IPDEELGEDQFGYWKRS 829
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK+ +++ LL RVL FS ++LD++E +L ++Y YL++DG T+ R LI
Sbjct: 830 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLI 889
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
++N+ D+ F+FLL+ R GG+GVNL A+ VII+D DWNP D QA+ RA RIGQK+ V
Sbjct: 890 TRYNE-DTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQV 948
Query: 362 LVLRFETVQTVEEQV 376
V R T T+EE++
Sbjct: 949 TVYRLLTAGTIEEKI 963
Score = 48 (22.0 bits), Expect = 4.3e-40, Sum P(2) = 4.3e-40
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 843 TPRRRGKRQALGSPPISDVSAGPESKSNLQSENNSGGL-RLSKSVSMGKQDALSQELSNK 901
TP + LG +D + P S + NS R+S++ + ++++S++ S
Sbjct: 1088 TPHSLTSSERLGEE--ADAVSRPRESSVIHGNGNSSDSPRVSRTCGVSGEESVSEKESLS 1145
Query: 902 IQVQPCGVATSA 913
+ + C V A
Sbjct: 1146 DKRESCQVQREA 1157
Score = 40 (19.1 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 1081 KTPTTGEAPRRRGKKQGSGPSIPDGSAVFDAKLNQH-SQNKSRDSFGSKTISLRSKQETA 1139
+TP + + R G+ + S P S+V N S SR S S+ K+ +
Sbjct: 1087 QTPHSLTSSERLGE-EADAVSRPRESSVIHGNGNSSDSPRVSRTCGVSGEESVSEKESLS 1145
Query: 1140 DVNDVARVMKEIFSE 1154
D + +V +E E
Sbjct: 1146 DKRESCQVQREALWE 1160
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 294 (108.6 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 67/169 (39%), Positives = 98/169 (57%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK +L + L KLK RV+ FS T +LD++E L ++Y+RLDG T +R LI
Sbjct: 801 GKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAERIGLI 860
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
DK+N F+FLLS RAGG G+NL +A+TVI+ D D NP D QA+ R HR+GQ R V
Sbjct: 861 DKYNTNPE-IFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHRMGQTRTV 919
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLE 410
V++ + ++E+ + + KL + Q +T ++ E E L+
Sbjct: 920 QVIKLISKDSIEDCMLRVGQEKLKL-EQDMTTDEGEDGAITEQMAELLK 967
Score = 234 (87.4 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 61/196 (31%), Positives = 91/196 (46%)
Query: 23 FNVLLTTYEYLM-NKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
FN++++TY + N HDR K++ Y + DEGH +KN + L + HRLLLT
Sbjct: 548 FNIIVSTYNLTIGNDHDRSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINAEHRLLLT 607
Query: 82 GTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXXIIN 141
GTP +F+SS SQ +K F + +I
Sbjct: 608 GTPLQNNLLELMSLLNFIMPSMFSSST--SQ-ISKMFSTRSSEEESSFHKDRIAQARLI- 663
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSIGNSKGRSV 201
++PF+LRR+K +V ELP K+E++ C S Q L + + L N R +
Sbjct: 664 -----MKPFILRRVKSEVLKELPPKMEKIEMCPMSDAQHKLYDILFKRLKKTPNGDKREL 718
Query: 202 HNSVMELRNICNHPYL 217
N +M+LR + NHP L
Sbjct: 719 CNVMMQLRKMANHPLL 734
>UNIPROTKB|D3ZZZ1 [details] [associations]
symbol:Ercc6 "Protein Ercc6" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1311509
GO:GO:0005524 GO:GO:0008630 GO:GO:0005730 GO:GO:0006284
GO:GO:0003677 GO:GO:0009636 GO:GO:0003682 GO:GO:0045494
GO:GO:0010332 GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257
GO:GO:0006283 GO:GO:0008094 GO:GO:0008023 GO:GO:0032786
GO:GO:0006290 GO:GO:0007256 GO:GO:0000303 IPI:IPI00358023
Ensembl:ENSRNOT00000038493 ArrayExpress:D3ZZZ1 Uniprot:D3ZZZ1
Length = 1475
Score = 481 (174.4 bits), Expect = 5.4e-40, Sum P(2) = 5.4e-40
Identities = 118/367 (32%), Positives = 191/367 (52%)
Query: 18 IVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHR 77
IVH VL+T+Y Y+ D +S+ WHY+I+DEGH+I+N + + K +++ HR
Sbjct: 608 IVHCH-GVLITSYSYIRLMQD--DISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHR 664
Query: 78 LLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXX 137
++L+G+P + F + F+ P G ++
Sbjct: 665 IILSGSPMQNNLRELWSLFDFTFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKC 724
Query: 138 XIINRLHQVLRPFVLRRLKH--KVENELPEKIERLVRCEASAYQ-KLLMKRVEEN-LGSI 193
+ L + P++LRR+K K+ LP+K E+++ C + Q K+ ++ + I
Sbjct: 725 ACV--LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRI 782
Query: 194 GNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP----IVRLCGKLEMLDR 249
N + + + + ++ LR ICNHP L + L P+ L + GK+ +++
Sbjct: 783 LNGENQ-IFSGLVALRKICNHPDLFSGGPKNTSAL-PEDGLEEEQFGYWKRSGKMIVVES 840
Query: 250 LLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDS 309
LL RVL FS ++L ++E +L +Y YL++DG T+ R LI K+N+ D+
Sbjct: 841 LLKIWHKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNE-DT 899
Query: 310 PFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETV 369
F+FLL+ R GG+GVNL A+ VII+D DWNP D QA+ RA RIGQK+ V V R T
Sbjct: 900 SIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTA 959
Query: 370 QTVEEQV 376
T+EE++
Sbjct: 960 GTIEEKI 966
Score = 48 (22.0 bits), Expect = 5.4e-40, Sum P(2) = 5.4e-40
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 2027 QEDPKESVVEAGDQMGVSLGGATVMEKSSE 2056
Q DPK D S+ GATVME+ S+
Sbjct: 1039 QMDPKRKKPLVSD---TSVNGATVMEEKSQ 1065
Score = 47 (21.6 bits), Expect = 6.9e-40, Sum P(2) = 6.9e-40
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 2408 SPPLVIAEDKTENEIEEDPVVNSVAV--EESKGSEA 2441
+PP++ + K + + D VN V E+S+GS A
Sbjct: 1034 TPPVLQMDPKRKKPLVSDTSVNGATVMEEKSQGSGA 1069
Score = 44 (20.5 bits), Expect = 1.4e-39, Sum P(2) = 1.4e-39
Identities = 23/97 (23%), Positives = 37/97 (38%)
Query: 1794 ADNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKASEAEIGDRIDEPQVDGFSPR 1853
+D G V E KS+ G + S S + D+ ++ G R GF
Sbjct: 1050 SDTSVNGATVMEEKSQGSGATGSVPSTE---SGPLKSDRHTD---GSRASSV---GFGEE 1100
Query: 1854 SMSG-VVDELVDEAGDHMGVSHSPVHVVEREKSEELG 1889
+ +G ++ L +GD V H+ SE+ G
Sbjct: 1101 ADAGSTLEHLSGLSGDSPAVDHTSRLSAVASTSEKQG 1137
Score = 40 (19.1 bits), Expect = 3.7e-39, Sum P(2) = 3.7e-39
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 1961 SSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKL 1996
S+E P+ S +GS+ + G++ D E L
Sbjct: 1075 STESGPLKSDRHTDGSRASSVGFGEEADAGSTLEHL 1110
Score = 40 (19.1 bits), Expect = 1.0e-37, Sum P(3) = 1.0e-37
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 515 HLGALDTQHYGRGKRAREVRSYEEQWTEE 543
HL H+ + K R+ + EE+ TE+
Sbjct: 1153 HLSEQTEGHFSKHKSKRKHDAAEEETTEK 1181
Score = 40 (19.1 bits), Expect = 1.0e-37, Sum P(3) = 1.0e-37
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 1012 KSKATLPAL--DSITEPYTGSTNTEGISNTIHHVPG 1045
K ++LP S+TE + EG ++T H G
Sbjct: 1317 KRNSSLPVQRPSSLTERTQNNMKKEGEAHTAEHFSG 1352
Score = 38 (18.4 bits), Expect = 6.1e-39, Sum P(2) = 6.1e-39
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 2391 VDGAVALENTSEGMG 2405
V+GA +E S+G G
Sbjct: 1054 VNGATVMEEKSQGSG 1068
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 317 (116.6 bits), Expect = 6.4e-40, Sum P(3) = 6.4e-40
Identities = 76/179 (42%), Positives = 107/179 (59%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK E LD +LP+++ +VL FS T +LD++E YL + Y Y RLDG T DR +I
Sbjct: 753 GKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMI 812
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
++FN F+FLLS RAGG+G+NL +A+ +II D D+NP D QA+ R HR+GQ++ V
Sbjct: 813 NEFNLSKD-LFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPV 871
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEE 420
V R + TVE + A A+ KL + Q +T G + + E LRE K+EE
Sbjct: 872 HVTRLVSKGTVEVGMLALAKKKLQLEKQ-VTDGV---------KGQLDEDALRELKEEE 920
Score = 218 (81.8 bits), Expect = 6.4e-40, Sum P(3) = 6.4e-40
Identities = 67/221 (30%), Positives = 99/221 (44%)
Query: 15 REKIVHQK--FNVLLTTYEYLMNKHDRPKLSK-IQWHYIIIDEGHRIKNASCKLNADLKH 71
R ++ QK +V+LTTY + +K D K K +Y+I DEGH +KN + L
Sbjct: 484 RHRVKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMK 543
Query: 72 YQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNS-SEDFSQWFNKPFESNGDNSPDXXX 130
+ ++LLTGTP +FN ED + F+ G + D
Sbjct: 544 VKGKKKILLTGTPLQNNLIELISLMYFVLSKVFNKYCEDITHLLQH-FKQLGP-ALDTKN 601
Query: 131 XXXXXXXXIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENL 190
I +L+P++LRRLK++V LP K E+++ E QK L + E L
Sbjct: 602 KALYQQDRI-EEAKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEAL 660
Query: 191 GSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPK 231
S G S + S+M LR NHP L + +E D + K
Sbjct: 661 QQSEES-GDS-YGSLMRLRQAANHPLLRR--SEYTDQKLDK 697
Score = 44 (20.5 bits), Expect = 6.4e-40, Sum P(3) = 6.4e-40
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 1835 EAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVEREKSEELGL--PS 1892
E E G++ + ++SG D++ D++GD S + + E K E+ + P
Sbjct: 918 EEEGGEQCGGRDLSKLLSSAISGRYDDVEDDSGD----SKNGIDAEEAAKKEDEAVKEPV 973
Query: 1893 LSSATKEEK 1901
KEE+
Sbjct: 974 EKEQQKEEE 982
Score = 40 (19.1 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 2342 VPEEADGPASFLAAEE--EKNECSDKEPVGSSVSQIESKEPEAKA 2384
V +++ + + AEE +K + + KEPV + E +P A
Sbjct: 945 VEDDSGDSKNGIDAEEAAKKEDEAVKEPVEKEQQKEEESQPSTSA 989
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 316 (116.3 bits), Expect = 9.8e-40, Sum P(2) = 9.8e-40
Identities = 69/163 (42%), Positives = 97/163 (59%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK +L +L +LK RV+ FS T +LD++E L Q+RYLRLDG T +R LI
Sbjct: 854 GKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLI 913
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
D+FN D F+FLLS +AGG+G+NL +A+ VI+ D D NP D QA+ R HR+GQ ++V
Sbjct: 914 DEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 972
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAED 404
LV++ + T+EE + + KL + T D T D
Sbjct: 973 LVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGTMPAD 1015
Score = 209 (78.6 bits), Expect = 9.8e-40, Sum P(2) = 9.8e-40
Identities = 59/201 (29%), Positives = 98/201 (48%)
Query: 20 HQKFNVLLTTYEY-LMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRL 78
++++NV++TTY + + DR +++ +Y I DEGH +KN L +++RL
Sbjct: 594 YEEYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRL 653
Query: 79 LLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXX 138
LLTGTP +F+SS S+ + F S ++ +
Sbjct: 654 LLTGTPVQNNLLELMSLLNFVMPHMFSSST--SE-IRRMFSSKTKSADEQSIYEKER--- 707
Query: 139 IINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLG-SIGN-S 196
I Q+++PF+LRR+K +V +LP K +++ C S Q+ L + L SI N
Sbjct: 708 -IAHAKQIIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIE 766
Query: 197 KGRSVHNSVMELRNICNHPYL 217
K + N +M+LR + NHP L
Sbjct: 767 KSTEMCNVMMQLRKMANHPLL 787
Score = 37 (18.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 231 KHYLPPIVRLCGKLEMLDR--LLPKLKATDHRVLFFSTMTR 269
KH+ +RL GK ++ +R L+ + TD + F T+
Sbjct: 891 KHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 930
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 316 (116.3 bits), Expect = 9.8e-40, Sum P(2) = 9.8e-40
Identities = 69/163 (42%), Positives = 97/163 (59%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK +L +L +LK RV+ FS T +LD++E L Q+RYLRLDG T +R LI
Sbjct: 854 GKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLI 913
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
D+FN D F+FLLS +AGG+G+NL +A+ VI+ D D NP D QA+ R HR+GQ ++V
Sbjct: 914 DEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 972
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAED 404
LV++ + T+EE + + KL + T D T D
Sbjct: 973 LVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGTMPAD 1015
Score = 209 (78.6 bits), Expect = 9.8e-40, Sum P(2) = 9.8e-40
Identities = 59/201 (29%), Positives = 98/201 (48%)
Query: 20 HQKFNVLLTTYEY-LMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRL 78
++++NV++TTY + + DR +++ +Y I DEGH +KN L +++RL
Sbjct: 594 YEEYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRL 653
Query: 79 LLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXX 138
LLTGTP +F+SS S+ + F S ++ +
Sbjct: 654 LLTGTPVQNNLLELMSLLNFVMPHMFSSST--SE-IRRMFSSKTKSADEQSIYEKER--- 707
Query: 139 IINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLG-SIGN-S 196
I Q+++PF+LRR+K +V +LP K +++ C S Q+ L + L SI N
Sbjct: 708 -IAHAKQIIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIE 766
Query: 197 KGRSVHNSVMELRNICNHPYL 217
K + N +M+LR + NHP L
Sbjct: 767 KSTEMCNVMMQLRKMANHPLL 787
Score = 37 (18.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 231 KHYLPPIVRLCGKLEMLDR--LLPKLKATDHRVLFFSTMTR 269
KH+ +RL GK ++ +R L+ + TD + F T+
Sbjct: 891 KHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 930
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 316 (116.3 bits), Expect = 9.8e-40, Sum P(2) = 9.8e-40
Identities = 69/163 (42%), Positives = 97/163 (59%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK +L +L +LK RV+ FS T +LD++E L Q+RYLRLDG T +R LI
Sbjct: 854 GKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLI 913
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
D+FN D F+FLLS +AGG+G+NL +A+ VI+ D D NP D QA+ R HR+GQ ++V
Sbjct: 914 DEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 972
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAED 404
LV++ + T+EE + + KL + T D T D
Sbjct: 973 LVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGTMPAD 1015
Score = 209 (78.6 bits), Expect = 9.8e-40, Sum P(2) = 9.8e-40
Identities = 59/201 (29%), Positives = 98/201 (48%)
Query: 20 HQKFNVLLTTYEY-LMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRL 78
++++NV++TTY + + DR +++ +Y I DEGH +KN L +++RL
Sbjct: 594 YEEYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRL 653
Query: 79 LLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXX 138
LLTGTP +F+SS S+ + F S ++ +
Sbjct: 654 LLTGTPVQNNLLELMSLLNFVMPHMFSSST--SE-IRRMFSSKTKSADEQSIYEKER--- 707
Query: 139 IINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLG-SIGN-S 196
I Q+++PF+LRR+K +V +LP K +++ C S Q+ L + L SI N
Sbjct: 708 -IAHAKQIIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIE 766
Query: 197 KGRSVHNSVMELRNICNHPYL 217
K + N +M+LR + NHP L
Sbjct: 767 KSTEMCNVMMQLRKMANHPLL 787
Score = 37 (18.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 231 KHYLPPIVRLCGKLEMLDR--LLPKLKATDHRVLFFSTMTR 269
KH+ +RL GK ++ +R L+ + TD + F T+
Sbjct: 891 KHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 930
>UNIPROTKB|Q03468 [details] [associations]
symbol:ERCC6 "DNA excision repair protein ERCC-6"
species:9606 "Homo sapiens" [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0007256 "activation of JNKK activity" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0010224 "response to UV-B" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEA] [GO:0045494 "photoreceptor cell
maintenance" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0047485 "protein N-terminus
binding" evidence=IPI] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IDA] [GO:0008023 "transcription
elongation factor complex" evidence=IDA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP;TAS] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0009411 "response to UV"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006979
"response to oxidative stress" evidence=IDA] [GO:0006284
"base-excision repair" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0009411 GO:GO:0008630 GO:GO:0006979
GO:GO:0005730 GO:GO:0032403 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 Orphanet:279 GO:GO:0045494
GO:GO:0010332 GO:GO:0006366 GO:GO:0004386 GO:GO:0010165
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 EMBL:CH471187 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 Orphanet:1466 EMBL:L04791 EMBL:AY204752 EMBL:AL138760
IPI:IPI00414779 PIR:A44224 RefSeq:NP_000115.1 UniGene:Hs.654449
ProteinModelPortal:Q03468 SMR:Q03468 DIP:DIP-193N IntAct:Q03468
MINT:MINT-1193928 STRING:Q03468 PhosphoSite:Q03468 DMDM:416959
PaxDb:Q03468 PRIDE:Q03468 Ensembl:ENST00000355832 GeneID:2074
KEGG:hsa:2074 UCSC:uc001jhr.4 CTD:2074 GeneCards:GC10M050663
HGNC:HGNC:3438 MIM:133540 MIM:214150 MIM:278800 MIM:600630
MIM:609413 MIM:613761 neXtProt:NX_Q03468 Orphanet:90321
Orphanet:90322 Orphanet:90324 Orphanet:1569 Orphanet:178338
PharmGKB:PA27852 HOGENOM:HOG000170952 HOVERGEN:HBG051502
InParanoid:Q03468 KO:K10841 OMA:NGEMQIF OrthoDB:EOG476JZF
PhylomeDB:Q03468 ChiTaRS:ERCC6 GenomeRNAi:2074 NextBio:8437
ArrayExpress:Q03468 Bgee:Q03468 CleanEx:HS_ERCC6
Genevestigator:Q03468 GermOnline:ENSG00000032514 GO:GO:0000303
Uniprot:Q03468
Length = 1493
Score = 483 (175.1 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 116/375 (30%), Positives = 197/375 (52%)
Query: 13 YSREKIVHQKFN---VLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADL 69
+ +EK++ + +L+T+Y Y+ D +S+ WHY+I+DEGH+I+N + +
Sbjct: 605 HKKEKLIRDVAHCHGILITSYSYIRLMQD--DISRYDWHYVILDEGHKIRNPNAAVTLAC 662
Query: 70 KHYQSSHRLLLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXX 129
K +++ HR++L+G+P + F + F+ P G ++
Sbjct: 663 KQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPV 722
Query: 130 XXXXXXXXXIINRLHQVLRPFVLRRLKH--KVENELPEKIERLVRCEASAYQ-KLLMKRV 186
+ L + P++LRR+K K+ LP+K E+++ C + Q K+ V
Sbjct: 723 QVKTAYKCACV--LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFV 780
Query: 187 E-ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP----IVRLC 241
+ + + I N + + + ++ LR ICNHP L + + L P L +
Sbjct: 781 DSKEVYRILNGE-MQIFSGLIALRKICNHPDLFSGGPKNLKGL-PDDELEEDQFGYWKRS 838
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK+ +++ LL RVL FS ++LD++E +L ++Y YL++DG T+ R LI
Sbjct: 839 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLI 898
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
++N+ D+ F+FLL+ R GG+GVNL A+ V+I+D DWNP D QA+ RA RIGQK+ V
Sbjct: 899 TRYNE-DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQV 957
Query: 362 LVLRFETVQTVEEQV 376
V R T T+EE++
Sbjct: 958 TVYRLLTAGTIEEKI 972
Score = 42 (19.8 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 1793 GADNPEGGVIVPEHKSENMGEKDDISSEHAFGSSLVLQDKA 1833
G EG VPEH S E D SS SSL+ + +A
Sbjct: 1356 GIMKKEGKDNVPEHFS-GRAEDADSSSGPLASSSLLAKMRA 1395
Score = 41 (19.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 2342 VPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESKEPEAKAFEP-MDV-VDGAVALEN 2399
VP+ PAS ++ + + E G+ V+ + S + +P M V L
Sbjct: 1050 VPKRKKFPASNISVNDATSSEEKSEAKGAEVNAVTSNRSDPLKDDPHMSSNVTSNDRLGE 1109
Query: 2400 TSEGMGGPSPPLVIA 2414
+ + GP VI+
Sbjct: 1110 ETNAVSGPEELSVIS 1124
Score = 40 (19.1 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 1946 QPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDISIMPEKL 1996
+P +S +AK +G+ V + + E +EA +Q + + EKL
Sbjct: 1205 KPKNSKHCRDAKFEGTRIPHLVKKRRYQKQDSENKSEAKEQSNDDYVLEKL 1255
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 312 (114.9 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 68/163 (41%), Positives = 97/163 (59%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK +L +L +LK RV+ FS T +LD++E L Q+RYLRLDG T +R LI
Sbjct: 854 GKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLI 913
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
D+FN D F+FLLS +AGG+G+NL +A+ VI+ D D NP D QA+ R HR+GQ ++V
Sbjct: 914 DEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 972
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAED 404
LV++ + T+EE + + KL + T D + D
Sbjct: 973 LVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPAD 1015
Score = 211 (79.3 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 60/201 (29%), Positives = 97/201 (48%)
Query: 20 HQKFNVLLTTYEY-LMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRL 78
++ +NV++TTY + + DR +++ +Y I DEGH +KN L +++RL
Sbjct: 594 YEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRL 653
Query: 79 LLTGTPXXXXXXXXXXXXXXXXXXIFNSSEDFSQWFNKPFESNGDNSPDXXXXXXXXXXX 138
LLTGTP +F+SS S+ + F S ++ +
Sbjct: 654 LLTGTPVQNNLLELMSLLNFVMPHMFSSST--SE-IRRMFSSKTKSADEQSIYEKER--- 707
Query: 139 IINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLG-SIGN-S 196
I Q+++PF+LRR+K +V +LP K +R+ C S Q+ L + L SI N
Sbjct: 708 -IAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLE 766
Query: 197 KGRSVHNSVMELRNICNHPYL 217
K + N +M+LR + NHP L
Sbjct: 767 KNTEMCNVMMQLRKMANHPLL 787
Score = 37 (18.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 231 KHYLPPIVRLCGKLEMLDR--LLPKLKATDHRVLFFSTMTR 269
KH+ +RL GK ++ +R L+ + TD + F T+
Sbjct: 891 KHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 930
>POMBASE|SPCC1235.05c [details] [associations]
symbol:fft2 "fun thirty related protein Fft2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0051276 "chromosome organization" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
Uniprot:O74842
Length = 1284
Score = 324 (119.1 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 72/179 (40%), Positives = 111/179 (62%)
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK+ +L LLPK+K R+L FS T++LD++E L + Y+RLDG T R +I
Sbjct: 924 GKIRVLKELLPKMKEEGSRILLFSQFTQMLDILEQVLDTLKISYVRLDGSTQVEVRQDII 983
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
D+F++++ +FLLS +AGG G+NL A+ VI++D +NP DLQA+ RAHR+GQ R+V
Sbjct: 984 DQFHKEED-VTVFLLSTKAGGFGINLACANVVILYDCSYNPFDDLQAEDRAHRVGQVREV 1042
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEE 420
V+R T T+EE ++ A KL + + S+++ +DR E E L+++ EE
Sbjct: 1043 TVIRLITDNTIEEYIQKLANTKLAL-DMSLSS-------DGKDREEIGERLVQDMLDEE 1093
Score = 171 (65.3 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 50/167 (29%), Positives = 77/167 (46%)
Query: 22 KFNVLLTTYEYLMN-KHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLL 80
K+++L+TTY+ N K DR L + + DEGH +KN + L + ++ RLLL
Sbjct: 649 KYDILVTTYQLATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNLNANFRLLL 708
Query: 81 TGTPXXXXXXXXXXXXXXXXXXIFNSS-EDFSQWFN-KPFESNGDNSPDXXXXXXXXXXX 138
TGTP +F+S +D F KP + D
Sbjct: 709 TGTPLQNNLKELVSLLAFILPNMFDSDMDDLDVIFKAKP-------TADADIEQALLSKQ 761
Query: 139 IINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKR 185
I+R ++ PFVLRR K++V N+LP+K + + C+ S Q + R
Sbjct: 762 RISRAKTMMTPFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNR 808
Score = 85 (35.0 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 46/198 (23%), Positives = 80/198 (40%)
Query: 1212 NSPNENPGELTGTKNDASVRGDHTPVSGHTLASKTEALKPENKAQAGRIENIANSSPDDK 1271
N+ N E+TG ++D + + S T A +T P +Q +E + D+K
Sbjct: 1094 NNGNNTKPEITGNESDGEFKVSSSNNSKQTDAEETNTGVPLEGSQPNSVEKTDLADGDEK 1153
Query: 1272 SLPMVPNLETAPPGFDIPIEKHNEQSRNQNNPEVKGEETPVSSEA--PASTEAFEQEKVT 1329
+ N++T + E N++ R +KGE S A P+S + E+ +
Sbjct: 1154 A-----NIKTEMKSETV--EGDNKELRET----MKGENVQTDSNAAVPSSKSSTEEPNES 1202
Query: 1330 NTSSFVNLADLSSDDKTCSVTPAMETAPGFDIPIEKGVEQSGTEIDA---KVKWKNTPLP 1386
S ++L D + V +E D+ + + EQ ID K + + + P
Sbjct: 1203 VLSGHLDL-----DTEASPVVSTIEKTTKGDVSVTE--EQQSANIDGQLEKPEIEESKKP 1255
Query: 1387 G--EAIVAGIEVFKPENK 1402
+ IE KP+NK
Sbjct: 1256 DVLNQVSLSIEEEKPKNK 1273
Score = 71 (30.1 bits), Expect = 4.8e-38, Sum P(3) = 4.8e-38
Identities = 55/225 (24%), Positives = 92/225 (40%)
Query: 1822 AFGSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELV-DEAGDHMGVSHSPVHVV 1880
A SL K E EIG+R+ + +D + + E+ +E+ VS S
Sbjct: 1066 ALDMSLSSDGKDRE-EIGERLVQDMLD--EENNGNNTKPEITGNESDGEFKVSSSNNSKQ 1122
Query: 1881 EREKSEELGLPSLSSATKE-EKIDGSLDKDPDSNLVVLEDSKGSIGDQMDCCQ------- 1932
+ G+P S EK D + D D +N+ S+ GD + +
Sbjct: 1123 TDAEETNTGVPLEGSQPNSVEKTDLA-DGDEKANIKTEMKSETVEGDNKELRETMKGENV 1181
Query: 1933 ---SGVVVPENLSDFCQPSSSLAPWEAKIDGSSEKDPVSSQSVLEGSKETVAEAGDQMDI 1989
S VP + S +P+ S+ +D +E PV S ++ + +K V+ +Q
Sbjct: 1182 QTDSNAAVPSSKSSTEEPNESVLSGHLDLD--TEASPVVS-TIEKTTKGDVSVTEEQQSA 1238
Query: 1990 SI-----MPE----KLPEHLDIPASLATPEEKTEGSEKDPDSSFA 2025
+I PE K P+ L+ SL+ EEK + E + D++ A
Sbjct: 1239 NIDGQLEKPEIEESKKPDVLN-QVSLSIEEEKPKNKESEVDNNAA 1282
Score = 63 (27.2 bits), Expect = 3.2e-37, Sum P(3) = 3.2e-37
Identities = 41/185 (22%), Positives = 76/185 (41%)
Query: 2261 EANNIIDAEGGGNMRQTVPQDL--GLPLSSSDVEEEKIEGFSKPVGSEKESIASAVPLDE 2318
E++ N +QT ++ G+PL S + +E G EK +I + + +
Sbjct: 1107 ESDGEFKVSSSNNSKQTDAEETNTGVPLEGS--QPNSVEKTDLADGDEKANIKTEMKSET 1164
Query: 2319 SKGPDAEVSSQTAIEGGGVVSIPVPEEADGPASFLAAEEEKNECSDKEPVGSSVSQIESK 2378
+G + E+ + ++G V + A P+S ++ EE NE V S ++++
Sbjct: 1165 VEGDNKEL--RETMKGENVQT---DSNAAVPSS-KSSTEEPNES-----VLSGHLDLDTE 1213
Query: 2379 -EPEAKAFEPMDVVDGAVALENTSEGMGGPSPPLVIAEDKTENEIEEDPVVNSVAVEESK 2437
P E D +V E S + G I E K + + + V S+ E+ K
Sbjct: 1214 ASPVVSTIEKTTKGDVSVTEEQQSANIDGQLEKPEIEESKKPDVLNQ--VSLSIEEEKPK 1271
Query: 2438 GSEAD 2442
E++
Sbjct: 1272 NKESE 1276
Score = 60 (26.2 bits), Expect = 6.6e-37, Sum P(3) = 6.6e-37
Identities = 30/144 (20%), Positives = 60/144 (41%)
Query: 1295 EQSRNQNNPEVKGEETPVSSEAPASTEAFEQE-KVTNTS--------SFVNLADLSSDDK 1345
E + N PE+ G E+ + +S + + + + TNT + V DL+ D+
Sbjct: 1093 ENNGNNTKPEITGNESDGEFKVSSSNNSKQTDAEETNTGVPLEGSQPNSVEKTDLADGDE 1152
Query: 1346 TCSVTPAM--ETAPGFDIPIEKGVEQSGTEIDAKV----KWKNTPLPGEAIVAGIEVFKP 1399
++ M ET G + + + ++ + D+ +T P E++++G
Sbjct: 1153 KANIKTEMKSETVEGDNKELRETMKGENVQTDSNAAVPSSKSSTEEPNESVLSGHLDLDT 1212
Query: 1400 ENKTDGDSVEKLEDTVDDHSLVKE 1423
E ++EK T D S+ +E
Sbjct: 1213 EASPVVSTIEKT--TKGDVSVTEE 1234
Score = 57 (25.1 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 27/135 (20%), Positives = 52/135 (38%)
Query: 2076 DNDPTGISMAVMDSKECAAEAADQMCVSEGCVVVTEKLSEDL-GLNXXXXXXXXXXXXXX 2134
D + T + + S+ + E D E + TE SE + G N
Sbjct: 1124 DAEETNTGVPLEGSQPNSVEKTDLADGDEKANIKTEMKSETVEGDNKELRETMKGENVQT 1183
Query: 2135 XXXDPVNSSVTVEDSKGFEAEACDQLHVLRGGGVVAETVQEEEKTELSCEKQPIGSSVDD 2194
V SS + + E+ L + V T+++ K ++S ++ +++D
Sbjct: 1184 DSNAAVPSSKSSTEEPN-ESVLSGHLDLDTEASPVVSTIEKTTKGDVSVTEEQQSANIDG 1242
Query: 2195 ESKGPEVEPCVQMDV 2209
+ + PE+E + DV
Sbjct: 1243 QLEKPEIEESKKPDV 1257
Score = 53 (23.7 bits), Expect = 3.6e-36, Sum P(3) = 3.6e-36
Identities = 38/188 (20%), Positives = 74/188 (39%)
Query: 848 GK-RQALGSPPISDV----SAGPESKSNLQSENNSGGLRLSKSVSMGKQDALSQELSNKI 902
GK R+ +G + D+ + G +K + + G ++S S + + DA +
Sbjct: 1075 GKDREEIGERLVQDMLDEENNGNNTKPEITGNESDGEFKVSSSNNSKQTDAEETNTGVPL 1134
Query: 903 Q-VQPCGVATSADVAGPDQKP---AEQSVRVVQSNQPINLPATHDSSSQPSGSTPAQVPS 958
+ QP V + D+A D+K E V+ + L T + + S A VPS
Sbjct: 1135 EGSQPNSVEKT-DLADGDEKANIKTEMKSETVEGDNK-ELRETMKGENVQTDSNAA-VPS 1191
Query: 959 MDLGNVASDTKEVLSENSSSKGGVIPILALSNMKAVERVNIQSFEEKACTNASKSKATLP 1018
+ + VLS + P++ S ++ + ++ EE+ N + P
Sbjct: 1192 SK-SSTEEPNESVLSGHLDLDTEASPVV--STIEKTTKGDVSVTEEQQSANID-GQLEKP 1247
Query: 1019 ALDSITEP 1026
++ +P
Sbjct: 1248 EIEESKKP 1255
Score = 52 (23.4 bits), Expect = 4.5e-36, Sum P(3) = 4.5e-36
Identities = 43/158 (27%), Positives = 66/158 (41%)
Query: 1766 SSSKDIIAESAKADVVLD--EHGKVQLLPGADNPEGGVIVPEHKSENMGEKDDISSEHAF 1823
++SK AE V L+ + V+ AD E I E KSE + + E
Sbjct: 1118 NNSKQTDAEETNTGVPLEGSQPNSVEKTDLADGDEKANIKTEMKSETVEGDNKELRETMK 1177
Query: 1824 GSSLVLQDKASEAEIGDRIDEPQVDGFSPRSMSGVVDELVDEAGDHMGVSHSPVHVVERE 1883
G ++ A+ +EP + +SG +D L EA SPV V E
Sbjct: 1178 GENVQTDSNAAVPSSKSSTEEP-----NESVLSGHLD-LDTEA--------SPV-VSTIE 1222
Query: 1884 KSEELGLPSLSSATKEEKIDGSLDKDPDSNLVVLEDSK 1921
K+ + G S++ + IDG L+K P+ +E+SK
Sbjct: 1223 KTTK-GDVSVTEEQQSANIDGQLEK-PE-----IEESK 1253
Score = 50 (22.7 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 13/66 (19%), Positives = 33/66 (50%)
Query: 339 DWNPQVDLQAQARAHRI-GQKRDVL-VLRFETVQTVEEQVRASAEHKLGVANQSITAGFF 396
D + + +++ + ++ + G +++ ++ E VQT S++ N+S+ +G
Sbjct: 1149 DGDEKANIKTEMKSETVEGDNKELRETMKGENVQTDSNAAVPSSKSSTEEPNESVLSGHL 1208
Query: 397 DNNTSA 402
D +T A
Sbjct: 1209 DLDTEA 1214
Score = 43 (20.2 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 33/154 (21%), Positives = 55/154 (35%)
Query: 1126 GSKTISLRSKQETADVNDVARVMKEIFSETCSSKAKTGDSSL---NEGKDXXXXXXXXXX 1182
GS+ S+ K + AD ++ A + E+ SET K ++ N D
Sbjct: 1136 GSQPNSVE-KTDLADGDEKANIKTEMKSETVEGDNKELRETMKGENVQTDSNAAVPSSKS 1194
Query: 1183 XXXEVAKKQSS-----DDKTCSVTPTVETPPPGFNSPNENP--GELTGTKNDASVRGDHT 1235
E + S D + V T+E G S E + G +
Sbjct: 1195 STEEPNESVLSGHLDLDTEASPVVSTIEKTTKGDVSVTEEQQSANIDGQLEKPEIEESKK 1254
Query: 1236 PVSGHTLASKTEALKPENKAQAGRIENIANSSPD 1269
P + ++ E KP+NK ++N N++ D
Sbjct: 1255 PDVLNQVSLSIEEEKPKNKES--EVDN--NAAKD 1284
Score = 41 (19.5 bits), Expect = 9.7e-08, Sum P(3) = 9.7e-08
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 2009 PEEKTEGSEKDPDSSFAAQEDPKESVVEAGDQMGVSLGGATVME 2052
P+ K EGS S F D E V++ V L G+T +E
Sbjct: 934 PKMKEEGSRILLFSQFTQMLDILEQVLDTLKISYVRLDGSTQVE 977
Score = 38 (18.4 bits), Expect = 2.9e-33, Sum P(4) = 2.9e-33
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 2180 ELSCEKQPIGSSVDDESKGPEVEPCVQMDVRGDGIVPETVPEELGLP 2226
+L E P+ S+++ +KG Q DG + + EE P
Sbjct: 1209 DLDTEASPVVSTIEKTTKGDVSVTEEQQSANIDGQLEKPEIEESKKP 1255
Score = 37 (18.1 bits), Expect = 2.9e-33, Sum P(4) = 2.9e-33
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 1552 NNLLETPLDIKSIGGPIV-----SMKAADVADADHPLETAVELGS 1591
NN +T + + G P+ S++ D+AD D E+ S
Sbjct: 1118 NNSKQTDAEETNTGVPLEGSQPNSVEKTDLADGDEKANIKTEMKS 1162
WARNING: HSPs involving 348 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.307 0.127 0.354 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 2442 2245 0.00094 126 3 11 23 0.39 35
41 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 598
No. of states in DFA: 627 (67 KB)
Total size of DFA: 753 KB (2319 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 238.04u 0.12s 238.16t Elapsed: 00:00:10
Total cpu time: 238.27u 0.12s 238.39t Elapsed: 00:00:11
Start: Mon May 20 20:40:17 2013 End: Mon May 20 20:40:28 2013
WARNINGS ISSUED: 2