BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000069
(2442 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/482 (50%), Positives = 325/482 (67%), Gaps = 34/482 (7%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 827 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 884
Query: 81 TGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLII 140
TGTPLQN L ELWALLNFLLP IF S F QWFN PF G+ L+EEE +LII
Sbjct: 885 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD----LNEEETILII 940
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGN--- 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L + G+
Sbjct: 941 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 1000
Query: 196 ----SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
+++ N++M+LR ICNHPY+ Q H EE +H Y ++ R GK
Sbjct: 1001 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEES---FAEHLGYSNGVINGAELYRASGK 1056
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ K
Sbjct: 1057 FELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKK 1116
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1117 FNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1176
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-RECKKEEAA 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1177 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEED 1236
Query: 423 PVLDDDALNDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
V DD+ LN ++AR E E D+F +D RR E+ ++ R + D LPS ++
Sbjct: 1237 EVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIK 1291
Query: 483 DD 484
DD
Sbjct: 1292 DD 1293
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/482 (50%), Positives = 325/482 (67%), Gaps = 34/482 (7%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + R+LL
Sbjct: 822 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 879
Query: 81 TGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLII 140
TGTPLQN L ELWALLNFLLP IF S F QWFN PF G+ L+EEE +LII
Sbjct: 880 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD----LNEEETILII 935
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGN--- 195
RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ SA QK+L + ++ L + G+
Sbjct: 936 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 995
Query: 196 ----SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
+++ N++M+LR ICNHPY+ Q H EE +H Y ++ R GK
Sbjct: 996 KKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEES---FAEHLGYSNGVINGAELYRASGK 1051
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ K
Sbjct: 1052 FELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKK 1111
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1112 FNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1171
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-RECKKEEAA 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1172 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEED 1231
Query: 423 PVLDDDALNDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
V DD+ LN ++AR E E D+F +D RR E+ ++ R + D LPS ++
Sbjct: 1232 EVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIK 1286
Query: 483 DD 484
DD
Sbjct: 1287 DD 1288
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/517 (46%), Positives = 327/517 (63%), Gaps = 71/517 (13%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 852 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 81 TGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLII 140
TGTPLQN L ELWALLNFLLP IF S F QWFN PF G+ + L+EEE +LII
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE----KVDLNEEETILII 965
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGN--- 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L + G+
Sbjct: 966 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1025
Query: 196 ----SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
+++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1081
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1082 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1141
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1142 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1201
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL--------RE 415
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L R
Sbjct: 1202 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRH 1261
Query: 416 C----------------------------KKEEAAPVLDDDALNDLLARSESEIDVFESV 447
C K+E+ P DD+ +N ++AR E E D+F +
Sbjct: 1262 CSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVP--DDETVNQMIARHEEEFDLFMRM 1319
Query: 448 DKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDD 484
D RR EE ++ R + D LPS ++ DD
Sbjct: 1320 DLDRRREEARNPKRKPRLMEED-----ELPSWIIKDD 1351
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/482 (50%), Positives = 325/482 (67%), Gaps = 34/482 (7%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 844 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 901
Query: 81 TGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLII 140
TGTPLQN L ELWALLNFLLP IF S F QWFN PF G+ + L+EEE +LII
Sbjct: 902 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE----KVDLNEEETILII 957
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGN--- 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L + G+
Sbjct: 958 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1017
Query: 196 ----SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
+++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1018 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1073
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1074 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1133
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1134 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1193
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-RECKKEEAA 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1194 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 1253
Query: 423 PVLDDDALNDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
V DD+ +N ++AR E E D+F +D RR EE ++ R + D LPS ++
Sbjct: 1254 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIK 1308
Query: 483 DD 484
DD
Sbjct: 1309 DD 1310
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/482 (50%), Positives = 325/482 (67%), Gaps = 34/482 (7%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 852 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 81 TGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLII 140
TGTPLQN L ELWALLNFLLP IF S F QWFN PF G+ + L+EEE +LII
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE----KVDLNEEETILII 965
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGN--- 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L + G+
Sbjct: 966 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1025
Query: 196 ----SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
+++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1081
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1082 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1141
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1142 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1201
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-RECKKEEAA 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1202 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 1261
Query: 423 PVLDDDALNDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
V DD+ +N ++AR E E D+F +D RR EE ++ R + D LPS ++
Sbjct: 1262 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIK 1316
Query: 483 DD 484
DD
Sbjct: 1317 DD 1318
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/482 (50%), Positives = 325/482 (67%), Gaps = 34/482 (7%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLL
Sbjct: 852 KFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL 909
Query: 81 TGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLII 140
TGTPLQN L ELWALLNFLLP IF S F QWFN PF G+ + L+EEE +LII
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE----KVDLNEEETILII 965
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGN--- 195
RLH+VLRPF+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L + G+
Sbjct: 966 RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD 1025
Query: 196 ----SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGK 243
+++ N++M+LR ICNHPY+ Q H EE +H + IV R GK
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGK 1081
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
E+LDR+LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+
Sbjct: 1082 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1141
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN+ S +FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V V
Sbjct: 1142 FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV 1201
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-RECKKEEAA 422
LR TV +VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE
Sbjct: 1202 LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED 1261
Query: 423 PVLDDDALNDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVT 482
V DD+ +N ++AR E E D+F +D RR EE ++ R + D LPS ++
Sbjct: 1262 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIK 1316
Query: 483 DD 484
DD
Sbjct: 1317 DD 1318
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/449 (50%), Positives = 320/449 (71%), Gaps = 21/449 (4%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLL 80
KFNVLLTTYEY++ D+ L+KIQW Y+IIDEGHR+KN CKL L HY + +RLLL
Sbjct: 871 KFNVLLTTYEYVIK--DKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLL 928
Query: 81 TGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLII 140
TGTPLQN L ELWALLNFLLP+IF S F QWFN PF + G+ L+EEE +LII
Sbjct: 929 TGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVE----LNEEETILII 984
Query: 141 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGN--- 195
RLH+VLRPF+LRRLK +VE++LP+K+E +++C+ SA Q++L K ++ L + G+
Sbjct: 985 RRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKG 1044
Query: 196 ----SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL---PPIVRLCGKLEMLD 248
+++ N++++LR +CNHP++ Q E+ H + P + R+ GK E+LD
Sbjct: 1045 KHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLD 1104
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
R+LPKLKAT+HRVL F MT+ + ++EDYL ++Q+ YLRLDG T DRG L+ KFN +
Sbjct: 1105 RILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKG 1164
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLLS RAGG+G+NLQ ADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR T
Sbjct: 1165 SDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMT 1224
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRE--CKKEEAAPVLD 426
V +VEE++ A+A +KL + + I AG FD ++ +R+++L+++L + ++EE V D
Sbjct: 1225 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPD 1284
Query: 427 DDALNDLLARSESEIDVFESVDKQRREEE 455
D+ +N ++ARSE EI++F+ +D +R++E+
Sbjct: 1285 DEMINMMIARSEEEIEIFKRMDAERKKED 1313
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/564 (44%), Positives = 351/564 (62%), Gaps = 66/564 (11%)
Query: 17 KIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSS 75
KI +F+V+LTT+EY++ +R LSK++W ++IIDEGHR+KNA KL+ L HY +
Sbjct: 860 KIRAGEFDVVLTTFEYIIK--ERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHAD 917
Query: 76 HRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEE 135
+RL+LTGTPLQNNL ELWALLNF+LP IFNS + F +WFN PF + G D+ LSEEE
Sbjct: 918 YRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTG--GQDKIELSEEE 975
Query: 136 NLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN----LG 191
LL+I RLH+VLRPF+LRRLK VE ELP+K+E++V+C+ SA Q+++ +++ + +G
Sbjct: 976 TLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIG 1035
Query: 192 SIGNSKG---RSVHNSVMELRNICNHPYLSQLHAEEVDTLI--PKHYLPPIVRLCGKLEM 246
N K R +N +M+L+ ICNHP++ EEV+ I + I R+ GK E+
Sbjct: 1036 DQNNKKMVGLRGFNNQIMQLKKICNHPFV----FEEVEDQINPTRETNDDIWRVAGKFEL 1091
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LDR+LPKLKAT HRVL F MT+++D+MED+L + +YLRLDGHT +R L+ FN
Sbjct: 1092 LDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNA 1151
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
DS + F+LS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQK +V +LR
Sbjct: 1152 PDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL 1211
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-----RECKKEEA 421
T +VEE + A KL + + I AG FDN +++E++ L SLL R K+E
Sbjct: 1212 ITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESG 1271
Query: 422 A---PVLDDDALNDLLARSESEIDVFESVDKQR--REEEMATWRKLIRGLGTDGEPLPPL 476
L D +N++LAR++ E+ V +D+ R +EEE+ +
Sbjct: 1272 VEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEELG------------------V 1313
Query: 477 PSRLVTDDDLKALYEAMKIYDAPKTGVSPNVG--VKRKGEHLGALDTQHYGRGKRAREVR 534
SRL+ +L +Y S ++G +KR+ A+ + GRG R R+
Sbjct: 1314 KSRLLEKSELPDIY-------------SRDIGAELKREESESAAV---YNGRGARERKTA 1357
Query: 535 SYEEQWTEEEFEKMCQAESSDSPK 558
+Y + +EE++ + Q E SD K
Sbjct: 1358 TYNDNMSEEQW--LRQFEVSDDEK 1379
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/533 (45%), Positives = 336/533 (63%), Gaps = 47/533 (8%)
Query: 17 KIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSS 75
+I FNVLLTT+EY++ DRP LS+I+W ++IIDEGHRIKN KL + L +Y S
Sbjct: 962 QIRSSNFNVLLTTFEYIIK--DRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQ 1019
Query: 76 HRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEE 135
+RL+LTGTPLQNNL ELWALLNF+LP IFNS + F +WFN PF + G D+ L+EEE
Sbjct: 1020 YRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQ--DKIGLNEEE 1077
Query: 136 NLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQ-KLLMKRVEENLGSIG 194
LLII RLH+VLRPF+ RRLK VE ELP+K+E++++C S Q KL + + + +
Sbjct: 1078 ALLIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVD 1137
Query: 195 NSKGRS----VHNSVMELRNICNHPYLSQLHAEEVDTLI--PKHYLPPIVRLCGKLEMLD 248
KG++ + N+VM+L+ ICNHP++ E+V+ I + + R GK E+LD
Sbjct: 1138 GEKGKTGIKGLQNTVMQLKKICNHPFI----FEDVERAIDPSGTNVDLLWRAAGKFELLD 1193
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
R+LPKL T H+ L F MT+++ +MEDYL K ++YLRLDG T DR +L+ +FN
Sbjct: 1194 RILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPK 1253
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S +IF+LS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQ ++V +LR T
Sbjct: 1254 SDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLIT 1313
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAPV---L 425
+++EE + + A++KL + + I AG FDN ++ E+R +L SLL ++ L
Sbjct: 1314 EKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGEL 1373
Query: 426 DDDALNDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 485
DD LN+L++R++ E+ +F+ +DK+R + I G G+PL RL+T ++
Sbjct: 1374 QDDELNELISRTDEELVLFKKLDKERAATD-------IYG---KGKPL----ERLLTVNE 1419
Query: 486 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEE 538
L Y K V + V+ E L+ Q+ R +R R SY E
Sbjct: 1420 LPDFY---------KVEVD-SFAVQSSSE----LEDQYLERKRRRRNSISYTE 1458
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 304/443 (68%), Gaps = 20/443 (4%)
Query: 17 KIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSS 75
++ H F VLLTTYEY++ DRP LS+I+W Y+IIDEGHR+KN KL L +Y S
Sbjct: 510 QVRHSNFQVLLTTYEYIIK--DRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSR 567
Query: 76 HRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEE 135
+RL+LTGTPLQNNL ELWALLNF+LP IFNS + F +WFN PF + G D+ L+EEE
Sbjct: 568 YRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTG--GQDKMELTEEE 625
Query: 136 NLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSI-- 193
+LL+I RLH+VLRPF+LRRLK VE ELP+K+E+++RC+ S Q+ L +++++ G +
Sbjct: 626 SLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKH-GMLYV 684
Query: 194 -----GNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHY-LPPIVRLCGKLEML 247
G + + + N+VM+L+ ICNHP++ + +D P + + R+ GK E+L
Sbjct: 685 EDAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERSID---PTGFNYDMLWRVSGKFELL 741
Query: 248 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 307
DR+LPKL + HR+L F MT+++++MEDYL ++Q+RYLRLDG T DR L+ FN
Sbjct: 742 DRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDP 801
Query: 308 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 367
+ +FLLS RAGG+G+NLQ ADTVIIFD+DWNP DLQAQ RAHRIGQ ++V + R
Sbjct: 802 TAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLI 861
Query: 368 TVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAPV--- 424
T ++VEE + A A++KL + + I AG FDN ++ E+R +L SLL EE
Sbjct: 862 TEKSVEENILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGE 921
Query: 425 LDDDALNDLLARSESEIDVFESV 447
LDDD LN++LAR + E+ +F+ +
Sbjct: 922 LDDDELNEILARGDDELRLFKQM 944
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/548 (44%), Positives = 348/548 (63%), Gaps = 53/548 (9%)
Query: 15 REKIVHQ----KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK 70
R + HQ F+VLLTTYEY++ D+ LSK W ++IIDEGHR+KNA KL+ +
Sbjct: 557 RHSLQHQIRVGNFDVLLTTYEYIIK--DKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTIS 614
Query: 71 HY-QSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEA 129
HY ++ +RL+LTGTPLQNNL ELWALLNF+LP IFNS++ F WFN PF + G + ++
Sbjct: 615 HYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTG--TQEKL 672
Query: 130 LLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN 189
L+EEE LLII RLH+VLRPF+LRRLK +VE +LP+K+E++++C+ S Q+ L +++ ++
Sbjct: 673 ELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKH 732
Query: 190 ------LGSIGNSKG--RSVHNSVMELRNICNHPYLSQLHAEEVDTLI--PKHYLPPIVR 239
G+ G +KG + ++N +M+LR ICNHP++ +EV+ ++ + + R
Sbjct: 733 NALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFV----FDEVEGVVNPSRGNSDLLFR 788
Query: 240 LCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGA 299
+ GK E+LDR+LPK KA+ HRVL F MT+++D+MED+L K +Y+RLDG T +R
Sbjct: 789 VAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTE 848
Query: 300 LIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKR 359
+++ FN DS +F FLLS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQK
Sbjct: 849 MLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKN 908
Query: 360 DVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRE--CK 417
+V +LR T +VEE + A KL + + I AG FDN ++AE++ +L L+ +
Sbjct: 909 EVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNR 968
Query: 418 KEEAAPVLDDDALNDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLP 477
++ LDDD LND LARS E +F+ +DK+R +E A + G +P P
Sbjct: 969 DDDDKAELDDDELNDTLARSADEKILFDKIDKERMNQERADAK-------AQGLRVP--P 1019
Query: 478 SRLVTDDDLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYE 537
RL+ D+L P V + EH D++ GR ++ + V Y+
Sbjct: 1020 PRLIQLDEL------------------PKVFREDIEEHFKKEDSEPLGRIRQKKRV-YYD 1060
Query: 538 EQWTEEEF 545
+ TEE+F
Sbjct: 1061 DGLTEEQF 1068
>sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1
Length = 2193
Score = 348 bits (892), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 208/506 (41%), Positives = 299/506 (59%), Gaps = 69/506 (13%)
Query: 4 VQCVMAV-------LLYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGH 56
V C+ V L+S+E + KFNVL+TTYE++M +DR KLSK+ W YIIIDE
Sbjct: 1056 VSCIYYVGTKDQRSKLFSQE-VCAMKFNVLVTTYEFIM--YDRSKLSKVDWKYIIIDEAQ 1112
Query: 57 RIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNK 116
R+K+ L DL Y+ RLLLTGTPLQN+L+ELW+LLN LLP++F++ + F WF +
Sbjct: 1113 RMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQ 1172
Query: 117 PFESNG-DNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEA 175
PF+ G ++ ++ L E+ +++I+RLHQ+L PF+LRR VE LP K+ ++RC
Sbjct: 1173 PFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRM 1232
Query: 176 SAYQKLLMKRV-----------EENLGSIGN-----SKGRSVHNSVMELRNICNHPYLSQ 219
SA Q + + +E L + N R+++N MELR CNHP L+
Sbjct: 1233 SAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNY 1292
Query: 220 LHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLT 279
+ + K +L VR CGKL +LDR+L KL+ T HRVL FSTMT+LLD++E+YL
Sbjct: 1293 PYFND----FSKDFL---VRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQ 1345
Query: 280 FKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTD 339
+++ Y R+DG TS DR + I FN D+ FIFLLSIRA G G+NLQ ADTV+I+D D
Sbjct: 1346 WRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPD 1405
Query: 340 WNPQVDLQAQARAHRIGQKRDVLVLRFETV------QTVEEQVRASA------------- 380
NP+ + QA ARAHRIGQ R+V V+ E V E+++R+
Sbjct: 1406 PNPKNEEQAVARAHRIGQTREVKVIYMEAVVEKLSSHQKEDELRSGGSVDLEDDMAGKDR 1465
Query: 381 --------------EHKLGVANQSITAGFFDNNTSAEDRREYLESLLR--ECKKEEAAPV 424
++K+ +A++ I AG FD T+ E+RR LE+LL E +E V
Sbjct: 1466 YIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDV 1525
Query: 425 LDDDALNDLLARSESEIDVFESVDKQ 450
+N ++ARSE E+++F+ +D++
Sbjct: 1526 PSLHEVNRMIARSEEEVELFDQMDEE 1551
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 328 bits (840), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 180/413 (43%), Positives = 252/413 (61%), Gaps = 38/413 (9%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE M ++ K W Y++IDE HRIKN KL+ L+ +
Sbjct: 218 FIRDVLMPGEWDVCVTSYE--MCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREF 275
Query: 73 QSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLS 132
++++RLL+TGTPLQNNL ELWALLNFLLP++FNSSEDF +WFN GD++
Sbjct: 276 KTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTN-TCLGDDA------- 327
Query: 133 EEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIER-----LVRCEASAYQKLLMKRVE 187
+I RLH VL+PF+LRRLK +VE L K E L + + Y K+L+K ++
Sbjct: 328 ------LITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDID 381
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLC 241
G+ G + + N +M+LR NHPYL D P PP +V
Sbjct: 382 VVNGA-GKVEKMRLQNILMQLRKCTNHPYL-------FDGAEPG---PPYTTDTHLVYNS 430
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK+ +LD+LLPKL+ RVL FS MTR+LD++EDY ++ Y Y RLDG T DR I
Sbjct: 431 GKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQI 490
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
+FN +S F+F+LS RAGG+G+NL AD VII+D+DWNPQ+DLQA RAHRIGQK+ V
Sbjct: 491 QEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQV 550
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 414
V R T TVEE++ AE KL + I G +N S + ++ + +++R
Sbjct: 551 RVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIR 603
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/386 (45%), Positives = 241/386 (62%), Gaps = 25/386 (6%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
R I+ +F+VL+T+YE ++ ++ L ++ W YI+IDE HRIKN L+ ++ + S
Sbjct: 276 RNIILEARFDVLITSYEMVI--REKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYS 333
Query: 75 SHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEE 134
+RLL+TGTPLQNNL ELWALLNFLLP+IF SE F +WF E N SE+
Sbjct: 334 KNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWF----EQNN---------SEQ 380
Query: 135 ENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRC-----EASAYQKLLMKRVEEN 189
+ ++I +LH VL PF+LRR+K VE L KIE V + Y+ LL K ++
Sbjct: 381 DQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAV 440
Query: 190 LGSIGNSKGRS-VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLD 248
G++G +G++ + N VM+LR CNHPYL E + P ++ GK+ +LD
Sbjct: 441 NGAVGKREGKTRLLNIVMQLRKCCNHPYL----FEGAEPGPPYTTDEHLIFNSGKMIILD 496
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LL +LK RVL FS M+RLLD++EDY F+ + Y R+DG TS +R ID++N+ +
Sbjct: 497 KLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPN 556
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL+ RAGG+G+NL ADTVI+FD+DWNPQ DLQA RAHRIGQK+ V V RF T
Sbjct: 557 SEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVT 616
Query: 369 VQTVEEQVRASAEHKLGVANQSITAG 394
+EE+V A KL + I G
Sbjct: 617 ENAIEEKVIERAAQKLRLDQLVIQQG 642
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 249/412 (60%), Gaps = 39/412 (9%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE L+ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 270 FVRDVLLPGEWDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 327
Query: 73 QSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLS 132
++++RLLLTGTPLQNNL ELW+LLNFLLP++FNS++DF WF+ GD
Sbjct: 328 KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTN-NCLGDQK------- 379
Query: 133 EEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIER-----LVRCEASAYQKLLMKRVE 187
++ RLH VLRPF+LRR+K VE LP K E L + + Y ++LMK ++
Sbjct: 380 ------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 433
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLC 241
L S G + N +M+LR CNHPYL D P PP +V
Sbjct: 434 -ILNSAGKMDKMRLLNILMQLRKCCNHPYL-------FDGAEPG---PPYTTDMHLVTNS 482
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK+ +LD+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I
Sbjct: 483 GKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSI 542
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
+ +N+ +S F+F+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V
Sbjct: 543 NAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTV 602
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
V RF T TVEE++ AE KL + + I G D N + + E L+ +
Sbjct: 603 RVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 654
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 322 bits (824), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 188/446 (42%), Positives = 262/446 (58%), Gaps = 49/446 (10%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 277 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 334
Query: 73 QSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLS 132
+S++RLLLTGTPLQNNL ELWALLNFLLP++FNS++DF WF+ GD
Sbjct: 335 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 386
Query: 133 EEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIER-----LVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K VE LP K E L + + Y K+LMK ++
Sbjct: 387 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 440
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLC 241
L S G + N +M+LR CNHPYL D P PP IV
Sbjct: 441 -VLNSSGKMDKMRLLNILMQLRKCCNHPYL-------FDGAEPG---PPYTTDEHIVGNS 489
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK+ LD+LL ++K RVL FS MTRLLD++EDY ++ Y Y RLDG T +R I
Sbjct: 490 GKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAI 549
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
D FN +S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRIGQK+ V
Sbjct: 550 DAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 609
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRE------ 415
V R T TVEE++ AE KL + + I G + S + +E + ++R
Sbjct: 610 RVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVF 669
Query: 416 -CKKEEAAPVLDDDALNDLLARSESE 440
CK+ E L D+ + +L R E +
Sbjct: 670 ACKESE----LTDEDIVTILERGEKK 691
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 322 bits (824), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 249/412 (60%), Gaps = 39/412 (9%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R+ ++ +++V +T+YE L+ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 269 FVRDVLLPGEWDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 326
Query: 73 QSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLS 132
++++RLLLTGTPLQNNL ELW+LLNFLLP++FNS++DF WF+ GD
Sbjct: 327 KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTN-NCLGDQK------- 378
Query: 133 EEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIER-----LVRCEASAYQKLLMKRVE 187
++ RLH VLRPF+LRR+K VE LP K E L + + Y ++LMK ++
Sbjct: 379 ------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 432
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLC 241
L S G + N +M+LR CNHPYL D P PP +V
Sbjct: 433 -ILNSAGKMDKMRLLNILMQLRKCCNHPYL-------FDGAEPG---PPYTTDMHLVTNS 481
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 301
GK+ +LD+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I
Sbjct: 482 GKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSI 541
Query: 302 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 361
+ +N+ +S F+F+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V
Sbjct: 542 NAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTV 601
Query: 362 LVLRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 412
V RF T TVEE++ AE KL + + I G D N + + E L+ +
Sbjct: 602 RVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 653
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 318 bits (815), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/381 (47%), Positives = 244/381 (64%), Gaps = 34/381 (8%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+V +T++E M ++ L + W YIIIDE HRIKN + L+ ++ Y +++RLL+T
Sbjct: 330 KFDVCVTSFE--MAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLIT 387
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQNNL ELW+LLNFLLP IF+S+E F +WF + +G+N E ++
Sbjct: 388 GTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF----QISGENDQQE----------VVQ 433
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSIGNSKG--R 199
+LH+VLRPF+LRRLK VE LP K E +++ S QK + + + + N+ G +
Sbjct: 434 QLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERK 493
Query: 200 SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGKLEMLDRLLPK 253
+ N M+LR CNHPYL Q AE P PP +V GK+ +LD+LLPK
Sbjct: 494 RLLNIAMQLRKCCNHPYLFQ-GAE------PG---PPYTTGEHLVENAGKMVLLDKLLPK 543
Query: 254 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 313
LK D RVL FS MTRLLD++EDYL ++ Y+Y R+DG+T G DR A I+ FN+ S F+
Sbjct: 544 LKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFV 603
Query: 314 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 373
FLLS RAGG+G+NL AD V+++D+DWNPQ DLQAQ RAHRIGQK++V V RF T T+E
Sbjct: 604 FLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIE 663
Query: 374 EQVRASAEHKLGVANQSITAG 394
E+V A KL + I G
Sbjct: 664 EKVIERAYKKLALDALVIQQG 684
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 318 bits (814), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 179/392 (45%), Positives = 232/392 (59%), Gaps = 40/392 (10%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
R+ I+ QKF+V TTYE ++ + +L K+ W YIIIDE HRIKN KL+ ++ S
Sbjct: 224 RDVILPQKFDVCCTTYEMMLKV--KTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNS 281
Query: 75 SHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWF-NKPFESNGDNSPDEALLSE 133
+RLL+TGTPLQNNL ELWALLNFLLP+IF SS+DF WF N N D
Sbjct: 282 ENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNTD---------- 331
Query: 134 EENLLIINRLHQVLRPFVLRRLKHKVENELPEKIER-----LVRCEASAYQKLLMKRVEE 188
++ RLH+VL+PF+LRR+K VE L K E L + + Y K+LMK ++
Sbjct: 332 -----LVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDI 386
Query: 189 NLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCG 242
G+ K R + N +M LR NHPYL D P PP +V G
Sbjct: 387 INGAGKVEKAR-LMNILMHLRKCVNHPYL-------FDGAEPG---PPFTTDQHLVDNSG 435
Query: 243 KLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALID 302
K+ +LD+LL K K RVL FS +R+LD++ED+ ++ Y Y RLDG T DR I+
Sbjct: 436 KMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIE 495
Query: 303 KFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVL 362
+N DS FIF+L+ RAGG+G+NL AD VII+D+DWNPQ DLQA RAHRIGQK+ V
Sbjct: 496 AYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVR 555
Query: 363 VLRFETVQTVEEQVRASAEHKLGVANQSITAG 394
V R T TV+E++ AE KL + N I G
Sbjct: 556 VFRLITENTVDERIIEKAEAKLRLDNIVIQQG 587
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 317 bits (812), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 181/424 (42%), Positives = 258/424 (60%), Gaps = 41/424 (9%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I W ++IDE HR+KN +CKL LK + H++LLT
Sbjct: 955 KFDALITTFEMILS--DCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLT 1012
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN +EEL++LL+FL P F S +F + F GD L +EE+ +
Sbjct: 1013 GTPLQNTVEELFSLLHFLEPAQFPSEIEFLREF-------GD------LKTEEQ----VQ 1055
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEE------NLGSIGN 195
+L +L+P +LRRLK VE L K E ++ E + QK + + E ++G+ N
Sbjct: 1056 KLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGATQN 1115
Query: 196 SKGRSVHNSVMELRNICNHPYL---------SQLHAEEVDTLIPKHYLPPIVRLCGKLEM 246
S ++ N++MELR CNHPYL S+L E D L P +L +VR GKL +
Sbjct: 1116 SNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELR-EVYDPLAPDFHLQALVRSAGKLVL 1174
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
LD+LLP+LKA H+VL FS M R LD++EDYL K+Y Y R+DG G R A ID+F++
Sbjct: 1175 LDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSK 1234
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
DS F+FLL RAGG+G+NL AADT +IFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 1235 PDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL 1294
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSA--EDRREYLESLLRECKKEEAAPV 424
T + E ++ A KLG+ ++++ N S+ + ++ +E LLR K A +
Sbjct: 1295 ITRNSYEREMLDKASLKLGL-DRAVLQSMSGNKESSIQQFSKKEIEDLLR---KGAYAAI 1350
Query: 425 LDDD 428
+D++
Sbjct: 1351 MDEN 1354
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/378 (44%), Positives = 235/378 (62%), Gaps = 32/378 (8%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 921 KFDALITTFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 978
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN +EEL++LL+FL P+ F S +F + F GD L +EE+ +
Sbjct: 979 GTPLQNTVEELFSLLHFLEPSQFPSESEFLKDF-------GD------LKTEEQ----VQ 1021
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 1022 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHT 1081
Query: 201 ----VHNSVMELRNICNHPYLSQ-------LHAEEVDTLIPKHY-LPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL + E +IP+ + L +VR GKL ++D
Sbjct: 1082 NMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLID 1141
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1142 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1201
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1202 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1261
Query: 369 VQTVEEQVRASAEHKLGV 386
+ E ++ A KLG+
Sbjct: 1262 RNSYEREMFDKASLKLGL 1279
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/378 (45%), Positives = 236/378 (62%), Gaps = 32/378 (8%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 919 KFDALITTFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 976
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN +EEL++LL+FL P+ F S +F + F GD L +EE+ +
Sbjct: 977 GTPLQNTVEELFSLLHFLEPSQFPSESEFLKDF-------GD------LKTEEQ----VQ 1019
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 1020 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHT 1079
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEVDT-------LIPKHY-LPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ T +IP + L +VR GKL ++D
Sbjct: 1080 NMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLID 1139
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1140 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1199
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1200 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1259
Query: 369 VQTVEEQVRASAEHKLGV 386
+ E ++ A KLG+
Sbjct: 1260 RNSYEREMFDKASLKLGL 1277
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/378 (44%), Positives = 235/378 (62%), Gaps = 32/378 (8%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 919 KFDALITTFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 976
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN +EEL++LL+FL P+ F S +F + F GD L +EE+ +
Sbjct: 977 GTPLQNTVEELFSLLHFLEPSQFPSESEFLKDF-------GD------LKTEEQ----VQ 1019
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G +
Sbjct: 1020 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHT 1079
Query: 201 ----VHNSVMELRNICNHPYLSQ-------LHAEEVDTLIPKHY-LPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL + E +IP+ + L +VR GKL ++D
Sbjct: 1080 NMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLID 1139
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1140 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1199
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T
Sbjct: 1200 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1259
Query: 369 VQTVEEQVRASAEHKLGV 386
+ E ++ A KLG+
Sbjct: 1260 RNSYEREMFDKASLKLGL 1277
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 314 bits (804), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 181/386 (46%), Positives = 247/386 (63%), Gaps = 36/386 (9%)
Query: 18 IVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHR 77
+V KF++ +T++E M ++ L + W YIIIDE HRIKN + L+ ++ + +++R
Sbjct: 284 LVAGKFDICVTSFE--MAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYR 341
Query: 78 LLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENL 137
LL+TGTPLQNNL ELWALLNFLLP IF+S+E F +WF + +G+N E
Sbjct: 342 LLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWF----QISGENDQQE--------- 388
Query: 138 LIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMK-RVEENLGSIGNS 196
++ +LH+VLRPF+LRRLK VE LP K E +++ S QK K ++++L ++ N+
Sbjct: 389 -VVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAV-NA 446
Query: 197 KG--RSVHNSVMELRNICNHPYLSQLHAE------EVDTLIPKHYLPPIVRLCGKLEMLD 248
G + + N M+LR CNHPYL Q AE D LI GK+ +LD
Sbjct: 447 GGERKRLLNIAMQLRKCCNHPYLFQ-GAEPGPPYTTGDHLITN---------AGKMVLLD 496
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLK D RVL FS MTRLLD++EDYL ++ Y Y R+DG+T G +R A I+ +N+
Sbjct: 497 KLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPG 556
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLLS RAGG+G+NL AD VI++D+DWNPQVDLQAQ RAHRIGQK++V V RF T
Sbjct: 557 SEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCT 616
Query: 369 VQTVEEQVRASAEHKLGVANQSITAG 394
+EE+V A KL + I G
Sbjct: 617 ESAIEEKVIERAYKKLALDALVIQQG 642
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 313 bits (801), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/367 (44%), Positives = 227/367 (61%), Gaps = 24/367 (6%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN +LTTYE ++ D+ L +QW +++DE HR+KN L LK + ++HRLL+T
Sbjct: 632 KFNCILTTYEIVLK--DKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLIT 689
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN+L+ELWALL+F++P+ F++ E+F E N+ D+
Sbjct: 690 GTPLQNSLKELWALLHFIMPDKFDTWENF--------EVQHGNAEDKG----------YT 731
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
RLHQ L P++LRR+K VE LP K+E+++R E ++ QK K + +N ++ K S
Sbjct: 732 RLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGS 791
Query: 201 VH---NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 257
N V+EL+ CNH L + E+ L L +++ GKL +LD+LL +LK T
Sbjct: 792 TSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKET 851
Query: 258 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 317
HRVL FS M R+LDV+ DYL + + + RLDG G R +D FN + S F FLLS
Sbjct: 852 GHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLS 911
Query: 318 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 377
RAGG+G+NL ADTVIIFD+DWNPQ DLQAQARAHRIGQK V + R T ++VEEQ+
Sbjct: 912 TRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIV 971
Query: 378 ASAEHKL 384
A+ K+
Sbjct: 972 ERAKQKM 978
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 312 bits (799), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/426 (42%), Positives = 251/426 (58%), Gaps = 52/426 (12%)
Query: 13 YSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY 72
+ R++++ +++V +T+YE ++ ++ K W Y++IDE HRIKN KL+ ++ +
Sbjct: 273 FIRDEMMPGEWDVCVTSYEMVIK--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 330
Query: 73 QSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLS 132
+S++RLLLTGTPLQNNL ELWALLNFLLP++FNS++DF WF+ GD
Sbjct: 331 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK-NCLGDQK------- 382
Query: 133 EEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIER-----LVRCEASAYQKLLMKRVE 187
++ RLH VL+PF+LRR+K VE LP K E L + + Y K+LMK +
Sbjct: 383 ------LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDI- 435
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLC 241
+ L S G + N +M+LR CNHPYL D P PP IV
Sbjct: 436 DVLNSSGKMDKMRLLNILMQLRKCCNHPYL-------FDGAEPG---PPYTTDEHIVSNS 485
Query: 242 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHT--------- 292
GK+ +LD+LL KLK RVL FS MTRLLD++EDY ++ Y Y RLDG T
Sbjct: 486 GKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKF 545
Query: 293 ----SGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQA 348
G R A I+ FN +S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA
Sbjct: 546 LEVEFLGQREA-IEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQA 604
Query: 349 QARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREY 408
RAHRIGQK+ V V R T TVEE++ AE KL + + I G + S + +E
Sbjct: 605 MDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEE 664
Query: 409 LESLLR 414
+ ++R
Sbjct: 665 MLQMIR 670
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 179/433 (41%), Positives = 262/433 (60%), Gaps = 35/433 (8%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYEY++ D+ +L+ I+W Y+ IDE HR+KN+ L L +++++RLL+T
Sbjct: 495 KFNILLTTYEYILK--DKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLIT 552
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQNNL+EL +L+NFL+P F ++ + F++P N + D I
Sbjct: 553 GTPLQNNLKELASLVNFLMPGKFYIRDELN--FDQP---NAEQERD------------IR 595
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI-GNSKGR 199
L + L+PF+LRRLK VE LP K ER++R E S Q K + +N ++ G++ GR
Sbjct: 596 DLQERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGR 655
Query: 200 ---SVHNSVMELRNICNHPYLSQLHAEEV---DTLIPKHYLPPIVRLCGKLEMLDRLLPK 253
S+ N V+EL+ + NHPYL AE+ + + L I+ GK+ +LD+LL +
Sbjct: 656 GQLSLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQR 715
Query: 254 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 313
LK HRVL FS M R+L+++ +Y++ + Y Y RLDG R ID FN DSP F+
Sbjct: 716 LKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFV 775
Query: 314 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 373
FLLS RAGG+G+NL ADTVIIFD+DWNPQ DLQA ARAHRIGQK V V RF + TVE
Sbjct: 776 FLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVE 835
Query: 374 EQVRASAEHKLGVANQSITAGFFDNNTSAEDRR---EYLESLLR-----ECKKEEAAPVL 425
E + A K+ + I+ G + + ++++ + + L ++L+ K E L
Sbjct: 836 EDILERARRKMILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFGASNMFKATENQKKL 895
Query: 426 DDDALNDLLARSE 438
++ L+D+L+ +E
Sbjct: 896 ENMNLDDILSHAE 908
>sp|B5DE69|CHD8_XENTR Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis
GN=chd8 PE=2 SV=2
Length = 2184
Score = 310 bits (795), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 179/426 (42%), Positives = 257/426 (60%), Gaps = 43/426 (10%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ L+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLT
Sbjct: 863 KFDALITTFEMVLS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLT 920
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN +EEL++LL+FL P F+S +F + F GD L +EE+ +
Sbjct: 921 GTPLQNTVEELFSLLHFLEPTQFSSEAEFLKDF-------GD------LKTEEQ----VQ 963
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + +S
Sbjct: 964 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGASQS 1023
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEVDTLI--------PKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ + P ++ +VR GKL ++D
Sbjct: 1024 NTPNLLNTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDFHVQAMVRSSGKLVLID 1083
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKL+A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1084 KLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPD 1143
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1144 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLIT 1203
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSA---EDRREYLESLLRECKKEEAA 422
+ E ++ A KLG+ QS++ DN+ S + ++ +E LLR K A
Sbjct: 1204 RNSYEREMFDKASLKLGLDKAVLQSMSGR--DNHLSGPIQQFTKKEIEDLLR---KGAYA 1258
Query: 423 PVLDDD 428
++D+D
Sbjct: 1259 AIMDED 1264
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 256/441 (58%), Gaps = 42/441 (9%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 1066 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 1123
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN +EEL++LL+FL P+ F S F Q F GD L +EE+ +
Sbjct: 1124 GTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF-------GD------LKTEEQ----VQ 1166
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 1167 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQA 1226
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ + P L +++ GKL ++D
Sbjct: 1227 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLID 1286
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1287 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1346
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1347 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1406
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLREC-------KK 418
+ E ++ A KLG+ QS++ N + ++ +E LLR+ ++
Sbjct: 1407 RNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEE 1466
Query: 419 EEAAPVLDDDALNDLLARSES 439
+E + ++D LL R+ +
Sbjct: 1467 DEGSKFCEEDIDQILLRRTHT 1487
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 308 bits (788), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 255/441 (57%), Gaps = 42/441 (9%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 1077 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 1134
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN +EEL++LL+FL P F S F Q F GD L +EE+ +
Sbjct: 1135 GTPLQNTVEELFSLLHFLEPGRFPSETTFMQEF-------GD------LKTEEQ----VQ 1177
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 1178 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQA 1237
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ + P L +++ GKL ++D
Sbjct: 1238 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLID 1297
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1298 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPD 1357
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1358 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1417
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLREC-------KK 418
+ E ++ A KLG+ QS++ N + ++ +E LLR+ ++
Sbjct: 1418 RNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEE 1477
Query: 419 EEAAPVLDDDALNDLLARSES 439
+E + ++D LL R+ +
Sbjct: 1478 DEGSKFCEEDIDQILLRRTHT 1498
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 307 bits (787), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 256/441 (58%), Gaps = 42/441 (9%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+ ++TT+E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLT
Sbjct: 1076 KFHAIITTFEMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT 1133
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN +EEL++LL+FL P+ F S F Q F GD L +EE+ +
Sbjct: 1134 GTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF-------GD------LKTEEQ----VQ 1176
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + G++
Sbjct: 1177 KLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQA 1236
Query: 201 ----VHNSVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLD 248
+ N++MELR CNHPYL E++ + P L +++ GKL ++D
Sbjct: 1237 NVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLID 1296
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ D
Sbjct: 1297 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1356
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T
Sbjct: 1357 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1416
Query: 369 VQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLREC-------KK 418
+ E ++ A KLG+ QS++ N + ++ +E LLR+ ++
Sbjct: 1417 RNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEE 1476
Query: 419 EEAAPVLDDDALNDLLARSES 439
+E + ++D LL R+ +
Sbjct: 1477 DEGSKFCEEDIDQILLRRTHT 1497
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/445 (42%), Positives = 260/445 (58%), Gaps = 48/445 (10%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S+HRLL+T
Sbjct: 588 KFNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 645
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN+L+ELW+LL+F++P F EDF + K E NG S
Sbjct: 646 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS---------------- 688
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGN 195
LH+VL PF+LRR+K VE LP K+E+++R E SA Y K ++ R + L G+ G+
Sbjct: 689 -LHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGS 747
Query: 196 SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLK 255
+ G N VMEL+ CNH YL + EE + + L ++R GKL +LD+LL +L+
Sbjct: 748 TSG--FLNIVMELKKCCNHCYLIKP-PEENERENGQEILLSLIRSSGKLILLDKLLTRLR 804
Query: 256 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 315
+RVL FS M R+LD++ +YLT K Y + RLDG G R +D FN S F FL
Sbjct: 805 ERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFL 864
Query: 316 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 375
LS RAGG+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE+
Sbjct: 865 LSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEE 924
Query: 376 VRASAEHKLGVANQSI----TAG--FFDNNTSAED----RREYL--------ESLLRECK 417
+ A+ K+ + + I T G +NN+ + +E L E L +E +
Sbjct: 925 IIERAKKKMVLDHLVIQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKELE 984
Query: 418 KEEAAPV-LDDDALNDLLARSESEI 441
EE+ P +D D + L E+E+
Sbjct: 985 GEESEPQEMDIDEILRLAETRENEV 1009
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 181/458 (39%), Positives = 265/458 (57%), Gaps = 43/458 (9%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ L I+W +++DE HR+KN K L Y+ H+LLLT
Sbjct: 854 KFHVLLTSYELITI--DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 911
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQNNLEEL+ LLNFL P FN+ E F + F A +S+E+ I
Sbjct: 912 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF--------------ADISKEDQ---IK 954
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEAS----AYQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L S G
Sbjct: 955 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGN 1014
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLCGKLEMLDRLLPKLKA 256
S+ N +M+L+ CNHPYL + A E L Y +++ GKL +L ++L KLK
Sbjct: 1015 QVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKE 1074
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L ++ Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1075 QGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLL 1134
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHRIGQ V++ RF T +VEE++
Sbjct: 1135 STRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERI 1194
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR-------------ECKKEEAAP 423
A+ K+ + + + G + + ++ L+ +L+ E K+E+++
Sbjct: 1195 TQVAKRKMMLTHLVVRPGL--GSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSV 1252
Query: 424 V-LDDDALNDLLARSESEIDVFESVDKQRREEEMATWR 460
+ D++A+ LL R++ D E D Q E +++++
Sbjct: 1253 IHYDNEAIARLLDRNQ---DATEDTDVQNMNEYLSSFK 1287
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 305 bits (780), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/380 (44%), Positives = 229/380 (60%), Gaps = 36/380 (9%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+V++TT+E ++ D P+L KI W +IIDE HR+KN +CKL LK H++LLT
Sbjct: 569 KFHVVITTFEMILA--DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLT 626
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN++EEL++LLNFL P+ F S F E GD L +EE+ +
Sbjct: 627 GTPLQNSVEELFSLLNFLEPSQFPSETAF-------LEEFGD------LKTEEQ----VK 669
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS 200
+L +L+P +LRRLK VE L K E ++ E + QK + + E+N + +KG +
Sbjct: 670 KLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--TKGAN 727
Query: 201 VHN------SVMELRNICNHPYLSQLHAEEVDTLI--------PKHYLPPIVRLCGKLEM 246
HN ++MELR CNHPYL E++ P L +++ GKL +
Sbjct: 728 QHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVL 787
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
+D+LLPKL A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F +
Sbjct: 788 IDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK 847
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R
Sbjct: 848 PDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL 907
Query: 367 ETVQTVEEQVRASAEHKLGV 386
T + E ++ A KLG+
Sbjct: 908 ITRNSYEREMFDKASLKLGL 927
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 304 bits (778), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 186/444 (41%), Positives = 254/444 (57%), Gaps = 31/444 (6%)
Query: 14 SREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQ 73
SR + KFNVLLT+YE + D L I W +++DE HR+K+ K L Y
Sbjct: 838 SRLRTTQYKFNVLLTSYELI--SMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYT 895
Query: 74 SSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSE 133
+++LLLTGTPLQNNLEEL+ LLNFL + FN + F F A +S+
Sbjct: 896 IAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEF--------------ADVSK 941
Query: 134 EENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV----EEN 189
EE + RLH++L P +LRRLK V +P K E +VR E SA QK K + E
Sbjct: 942 EEQ---VKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEA 998
Query: 190 LGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHY-LPPIVRLCGKLEMLD 248
L S S+ N +M+L+ CNHPYL AEE T Y + + + GKL +L
Sbjct: 999 LNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLS 1058
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
++L +LKA +HRVL FS MT++LD++ED+L +QY+Y R+DG +G R ID+FN
Sbjct: 1059 KMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPG 1118
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
+ F+FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ V++ RF T
Sbjct: 1119 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1178
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGF------FDNNTSAEDRREYLESLLRECKKEEAA 422
+VEE+V A+ K+ + + + G F + R E L +E KEEA
Sbjct: 1179 RNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKEDDKEEAI 1238
Query: 423 PVLDDDALNDLLARSESEIDVFES 446
DD A+ +LL R+ I+ ES
Sbjct: 1239 HY-DDKAVAELLDRTNRGIEEKES 1261
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/389 (42%), Positives = 235/389 (60%), Gaps = 24/389 (6%)
Query: 12 LYSREKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKH 71
++ +K V KF+VLLT+YE + D+ L I+W +++DE HR+KN K L
Sbjct: 808 VFRMKKEVQIKFHVLLTSYELITI--DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 865
Query: 72 YQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALL 131
Y+ ++LLLTGTPLQNNLEEL+ LLNFL P FN+ E F + F A +
Sbjct: 866 YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF--------------ADI 911
Query: 132 SEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEAS----AYQKLLMKRVE 187
S+E+ I +LH +L P +LRRLK V +P K E +VR E S Y K ++ R
Sbjct: 912 SKEDQ---IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 968
Query: 188 ENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHY-LPPIVRLCGKLEM 246
E L S G S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +
Sbjct: 969 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 1028
Query: 247 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 306
L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN
Sbjct: 1029 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1088
Query: 307 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 366
+ F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF
Sbjct: 1089 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1148
Query: 367 ETVQTVEEQVRASAEHKLGVANQSITAGF 395
T +VEE++ A+ K+ + + + G
Sbjct: 1149 VTRASVEERITQVAKRKMMLTHLVVRPGL 1177
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/388 (43%), Positives = 231/388 (59%), Gaps = 29/388 (7%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFNVLLTTYEY++ DR +L I+W ++ +DE HR+KNA L L ++ ++R+L+T
Sbjct: 484 KFNVLLTTYEYILK--DRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLIT 541
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQNN++EL AL+NFL+P F ++ FE+ +EE I+
Sbjct: 542 GTPLQNNIKELAALVNFLMPGRFTIDQEID------FEN-----------QDEEQEEYIH 584
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI-GNSKG- 198
LH+ ++PF+LRRLK VE LP K ER++R E S Q K + +N ++ +KG
Sbjct: 585 DLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGG 644
Query: 199 -RSVHNSVMELRNICNHPYLSQLHAEEV------DTLIPKHYLPPIVRLCGKLEMLDRLL 251
S+ N + EL+ NHPYL E V + ++ L ++ GK+ +LD+LL
Sbjct: 645 HFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLL 704
Query: 252 PKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPF 311
+LK HRVL FS M R+LD++ DYL+ K + RLDG R ID FN DS
Sbjct: 705 TRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSND 764
Query: 312 FIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQT 371
F+FLLS RAGG+G+NL ADTV+IFD+DWNPQ DLQA ARAHRIGQK V+V R + T
Sbjct: 765 FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDT 824
Query: 372 VEEQVRASAEHKLGVANQSITAGFFDNN 399
VEE+V A K+ + I+ G D N
Sbjct: 825 VEEEVLERARKKMILEYAIISLGVTDGN 852
>sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9
PE=1 SV=2
Length = 2897
Score = 301 bits (770), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/400 (42%), Positives = 239/400 (59%), Gaps = 37/400 (9%)
Query: 5 QCVMAVLLYSRE---KIVH--QKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIK 59
Q + +Y R+ +I+ +F ++TT+E ++ +L+ I+W +IIDE HR+K
Sbjct: 946 QMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCG--ELNAIEWRCVIIDEAHRLK 1003
Query: 60 NASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFE 119
N +CKL LK H++LLTGTPLQN +EEL++LL+FL P F S F Q F
Sbjct: 1004 NKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF----- 1058
Query: 120 SNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQ 179
GD L +EE+ + +L +L+P +LRRLK VE +L K E ++ E + Q
Sbjct: 1059 --GD------LKTEEQ----VQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQ 1106
Query: 180 KLLMKRV-EENLGSIGNSKGRS----VHNSVMELRNICNHPYL-----SQLHAEEVDTLI 229
K + + E+N + G++ + N++MELR CNHPYL ++ E DT
Sbjct: 1107 KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYN 1166
Query: 230 PK---HYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYL 286
P +L +++ GKL ++D+LLPK+KA H+VL FS M R LD++EDYL K+Y Y
Sbjct: 1167 PAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 1226
Query: 287 RLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDL 346
R+DG G R A ID+F++ DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DL
Sbjct: 1227 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL 1286
Query: 347 QAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 386
QAQAR HRIGQ + V V R T + E ++ A KLG+
Sbjct: 1287 QAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGL 1326
>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
PE=1 SV=2
Length = 2885
Score = 300 bits (769), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 183/465 (39%), Positives = 268/465 (57%), Gaps = 51/465 (10%)
Query: 5 QCVMAVLLYSRE---KIVH--QKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIK 59
Q + +Y R+ +I+ +F ++TT+E ++ +L+ I W +IIDE HR+K
Sbjct: 945 QMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCG--ELNAIDWRCVIIDEAHRLK 1002
Query: 60 NASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFE 119
N +CKL LK H++LLTGTPLQN +EEL++LL+FL P F S F Q F
Sbjct: 1003 NKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF----- 1057
Query: 120 SNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQ 179
GD L +EE+ + +L +L+P +LRRLK VE +L K E ++ E + Q
Sbjct: 1058 --GD------LKTEEQ----VQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQ 1105
Query: 180 KLLMKRV-EENLGSIGNSKGRS----VHNSVMELRNICNHPYL-----SQLHAEEVDTLI 229
K + + E+N + G++ + N++MELR CNHPYL ++ E DT
Sbjct: 1106 KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYN 1165
Query: 230 PK---HYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYL 286
P +L +++ GKL ++D+LLPK+KA H+VL FS M R LD++EDYL K+Y Y
Sbjct: 1166 PSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 1225
Query: 287 RLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDL 346
R+DG G R A ID+F++ DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DL
Sbjct: 1226 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL 1285
Query: 347 QAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAE 403
QAQAR HRIGQ + V V R T + E ++ A KLG+ QS++ D+N S
Sbjct: 1286 QAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGR--DSNVSGI 1343
Query: 404 DR--REYLESLLREC-------KKEEAAPVLDDDALNDLLARSES 439
+ ++ +E LLR +++E + ++D LL R+++
Sbjct: 1344 QQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDIDQILLRRTKT 1388
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 300 bits (768), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 260/444 (58%), Gaps = 34/444 (7%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
RE KFNV+LT+YE++ D L I W +++DE HR+++ K L Y+
Sbjct: 373 RENQTQYKFNVMLTSYEFI--SVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRI 430
Query: 75 SHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEE 134
++LLLTGTPLQNNLEEL+ LLNFL FN + F F +S+E
Sbjct: 431 GYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTD--------------VSKE 476
Query: 135 ENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI 193
E + RLH++L P +LRRLK V +P K E +VR E S+ QK K + +N ++
Sbjct: 477 EQ---VKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKAL 533
Query: 194 ---GNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPK--HYLPPIVRLCGKLEMLD 248
G + S+ N +M+LR CNHPYL AEE T+ P + + + + GKL++L
Sbjct: 534 NQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEA-TISPSGLYEMSSLTKASGKLDLLS 592
Query: 249 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 308
++L +LKA +HRVL FS MT++L+V+E +L + Y+Y R+DG G R ID+FN
Sbjct: 593 KMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPV 652
Query: 309 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 368
S F+FLLS RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHR+GQK+ V++ RF T
Sbjct: 653 SEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVT 712
Query: 369 VQTVEEQVRASAEHKLGVANQSITAGF--FDNNTSAEDRREYL----ESLLRECKKEEAA 422
+VEE++ A+HK+ + + + G N S ++ + L E L ++ K E A
Sbjct: 713 HNSVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRFGTEDLFKDGKSE--A 770
Query: 423 PVLDDDALNDLLARSESEIDVFES 446
DD A+ DLL R+ I+ ES
Sbjct: 771 IHYDDKAVADLLDRTNRGIEEKES 794
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/443 (40%), Positives = 251/443 (56%), Gaps = 53/443 (11%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYEY++ DR LS I+W Y+ IDE HR+KN+ L L +++S+RLL+T
Sbjct: 479 KFNLLLTTYEYVLK--DRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLIT 536
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQNN+ EL AL++FL+P F E+ + +PD EE I
Sbjct: 537 GTPLQNNIRELAALVDFLMPGKFEIREEINL-----------EAPD------EEQEAYIR 579
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEAS-----AYQKLLMKRVEENLGSIGNS 196
L + L+P++LRRLK VE LP K ER++R E S Y+ +L + SI +
Sbjct: 580 SLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSG 639
Query: 197 KGRSVHNSVMELRNICNHPYL-------------SQLHAEEVDTLIPKHYLPPIVRLCGK 243
S+ N V+EL+ NHPYL SQ +EV L ++ GK
Sbjct: 640 SQISLLNIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEV--------LKGLIMNSGK 691
Query: 244 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 303
+ +LD+LL +L+ HRVL FS M R+LD++ DYL+ + Y + RLDG R ID
Sbjct: 692 MVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDH 751
Query: 304 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 363
FN +SP F+FLLS RAGG+G+NL ADTVIIFD+DWNPQ DLQA ARAHRIGQK V+V
Sbjct: 752 FNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMV 811
Query: 364 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRR---EYLESLLR-----E 415
R + T+EE V A K+ + I+ G D ++++ + E L ++L+
Sbjct: 812 YRLLSKDTIEEDVLERARRKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNM 871
Query: 416 CKKEEAAPVLDDDALNDLLARSE 438
K E L+D L+++L +E
Sbjct: 872 FKAENNQKKLEDMNLDEILEHAE 894
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/447 (39%), Positives = 254/447 (56%), Gaps = 48/447 (10%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ LS I W +++DE HR+KN +L+ Y +R+LLT
Sbjct: 734 KFHVLLTSYECI--NMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLT 791
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQNNLEEL+ LLNFL P+ FN E F+ F++ +S+E+ I
Sbjct: 792 GTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE--------------ISKEDQ---IE 834
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG-- 198
+LH +L P +LRRLK V +P K E +VR E SA QK K + N ++ G
Sbjct: 835 KLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGT 894
Query: 199 -RSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKA 256
S+ N +MEL+ CNHPYL E L Y +++ GK +L ++L KLK
Sbjct: 895 QMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKD 954
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT +LD++ED+ + Y+Y R+DG +G R ID++N + F+FLL
Sbjct: 955 GGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLL 1014
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHR+GQK V++ RF T +VEE++
Sbjct: 1015 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERI 1074
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR----ECKKEEAAP--------- 423
+ A+ K+ + + + AG + + + E L+ +LR E KEE AP
Sbjct: 1075 TSVAKKKMLLTHLVVRAGLGAKDGKSMSKTE-LDDVLRWGTEELFKEEEAPVEGADGEGT 1133
Query: 424 ----------VLDDDALNDLLARSESE 440
V DD A++ LL R++ E
Sbjct: 1134 SSKKPNEQEIVWDDAAVDFLLDRNKEE 1160
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1
PE=1 SV=1
Length = 764
Score = 295 bits (755), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/443 (41%), Positives = 258/443 (58%), Gaps = 29/443 (6%)
Query: 17 KIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSH 76
K V KF +++T+YE MN R L W Y++IDEGHR+KN CKL +LKH + +
Sbjct: 298 KTVGPKFPIVITSYEVAMNDAKRI-LRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDN 356
Query: 77 RLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEEN 136
+LLLTGTPLQNNL ELW+LLNF+LP+IF S ++F WF+ ++ + + +E E+
Sbjct: 357 KLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEE---EEKRR 413
Query: 137 LLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQK-----LLMKRVEENLG 191
++++LH +LRPF+LRR+K VE LP K E ++ + +QK L+ +E +LG
Sbjct: 414 AQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLG 473
Query: 192 S---IGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP----IVRLCGKL 244
G ++N V++LR CNHP L Q I YL P IV CGK
Sbjct: 474 ENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQGQ-------IDGSYLYPPVEEIVGQCGKF 526
Query: 245 EMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKF 304
+L+RLL +L A +H+VL FS T+LLD+M+ Y + K + R+DG +R I F
Sbjct: 527 RLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDF 586
Query: 305 NQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVL 364
+ + S IFLLS RAGG+G+NL AADT I++D+DWNPQ+DLQA R HRIGQ + V V
Sbjct: 587 SDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVY 646
Query: 365 RFETVQTVEEQVRASAEHKLGVANQSITAGFFDN---NTSAEDRREYLESLLRECKKEEA 421
R T Q++E +V A KL + + I G F +S E + +LL+E + E
Sbjct: 647 RLSTAQSIETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEEDILALLKEDETAED 706
Query: 422 APV---LDDDALNDLLARSESEI 441
+ + D L+ LL RS+ I
Sbjct: 707 KLIQTDISDADLDRLLDRSDLTI 729
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 295 bits (754), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/382 (42%), Positives = 231/382 (60%), Gaps = 30/382 (7%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D+ LS I+W +++DE HR+KN +L Y +R+LLT
Sbjct: 720 KFHVLLTSYETI--NMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLT 777
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQNNLEEL+ LLNFL FN E F+ FN+ +S+E+ I
Sbjct: 778 GTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNE--------------ISKEDQ---IE 820
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG-- 198
+LH +L P +LRRLK V +P K E +VR E SA QK K + N ++ G
Sbjct: 821 KLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGT 880
Query: 199 -RSVHNSVMELRNICNHPYL---SQLHA-EEVDTLIPKHYLPPIVRLCGKLEMLDRLLPK 253
S+ N +MEL+ CNHPYL ++L A +E + + +++ GK +L ++L K
Sbjct: 881 QMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEG---TALIKNSGKFVLLQKMLRK 937
Query: 254 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 313
LK HRVL FS MTR+LD+MED ++ YRY R+DG G R ID++N + FI
Sbjct: 938 LKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFI 997
Query: 314 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 373
FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHR+GQK V++ RF T ++VE
Sbjct: 998 FLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVE 1057
Query: 374 EQVRASAEHKLGVANQSITAGF 395
E++ + A+ K+ + + + AG
Sbjct: 1058 EKITSVAKKKMLLNHLVVRAGL 1079
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 295 bits (754), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 170/431 (39%), Positives = 248/431 (57%), Gaps = 44/431 (10%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE M D L I+W +I+DEGHR+KN KL + L Y S+HR+LLT
Sbjct: 393 KFDVLLTSYE--MINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLT 450
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQNNL+EL+ L++FL F S E+F + F +++EE I+
Sbjct: 451 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD--------------INQEEQ---IS 493
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSIGNSKG--- 198
RLH++L P +LRR+K V ++P K E ++R + S+ QK K + + KG
Sbjct: 494 RLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGAQ 553
Query: 199 RSVHNSVMELRNICNHPYLSQLHAEEVDTLI--PKHYLPPIVRLCGKLEMLDRLLPKLKA 256
S++N +MELR +C HPY+ E V+ +I ++ CGKL++LD+++ KLK
Sbjct: 554 ISLNNIMMELRKVCCHPYM----LEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKE 609
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL ++ +LD++EDY T K+++Y R+DG G +R ID+FN ++S F FLL
Sbjct: 610 QGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLL 669
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP DLQA ARAHR+GQ V++ R T+EE++
Sbjct: 670 STRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERM 729
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAP-----------VL 425
+ K+ V + N + E+ L+ ++R KE A
Sbjct: 730 MQLTKKKM-VLEHLVVGKLKTQNINQEE----LDDIIRYGSKELFASEDDEAGKSGKIHY 784
Query: 426 DDDALNDLLAR 436
DD A++ LL R
Sbjct: 785 DDAAIDKLLDR 795
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/384 (45%), Positives = 238/384 (61%), Gaps = 37/384 (9%)
Query: 15 REKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQS 74
++K++ F+V++ +YE ++ ++ L KI W YIIIDE HRIKN L+ L+ + S
Sbjct: 288 QKKLLGCDFDVVIASYEIII--REKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTS 345
Query: 75 SHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEE 134
+RLL+TGTPLQNNL ELWALLNFLLP+IF+ ++DF WF+ ES +EE
Sbjct: 346 RNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSS--ES-----------TEE 392
Query: 135 ENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI 193
+ I+ +LH VL+PF+LRR+K VE L K E + S+ QK K++ E++L ++
Sbjct: 393 DQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAV 452
Query: 194 GNSKGRS-----VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCG 242
S G + N +M+LR CNHPYL D P PP +V
Sbjct: 453 NGSNGSKESKTRLLNIMMQLRKCCNHPYL-------FDGAEPG---PPYTTDEHLVYNAA 502
Query: 243 KLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALID 302
KL++LD+LL KLK RVL FS M+RLLD++EDY F+ Y Y R+DG T+ DR ID
Sbjct: 503 KLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAID 562
Query: 303 KFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVL 362
+N DS F+FLL+ RAGG+G+NL +AD V+++D+DWNPQ DLQA RAHRIGQK+ V
Sbjct: 563 DYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVK 622
Query: 363 VLRFETVQTVEEQVRASAEHKLGV 386
V R T +VEE++ A KL +
Sbjct: 623 VFRLVTDNSVEEKILERATQKLRL 646
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/369 (44%), Positives = 230/369 (62%), Gaps = 29/369 (7%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 581 KFNILLTTYEILLK--DKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 638
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN+L+ELW+LL+F++P F+S EDF + K E +
Sbjct: 639 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYAS----------------- 681
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGN 195
LH+ L PF+LRR+K VE LP K+E+++R E SA Y K ++ R + L GS G+
Sbjct: 682 -LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGS 740
Query: 196 SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLK 255
+ G N +MEL+ CNH YL + ++ + + L ++R GKL +LD+LL +L+
Sbjct: 741 TSG--FLNIMMELKKCCNHCYLIKP-PDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLR 797
Query: 256 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 315
+RVL FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FL
Sbjct: 798 ERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFL 857
Query: 316 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 375
LS RAGG+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE
Sbjct: 858 LSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEED 917
Query: 376 VRASAEHKL 384
+ A+ K+
Sbjct: 918 ILERAKKKM 926
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/369 (44%), Positives = 228/369 (61%), Gaps = 29/369 (7%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 583 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 640
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQN+L+ELW+LL+F++P F+S EDF + K E
Sbjct: 641 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------------------YA 682
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGN 195
LH+ L PF+LRR+K VE LP K+E+++R E SA Y K ++ R + L GS G+
Sbjct: 683 SLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGS 742
Query: 196 SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLK 255
+ G N +MEL+ CNH YL + + + + L ++R GKL +LD+LL +L+
Sbjct: 743 TSG--FLNIMMELKKCCNHCYLIKP-PDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLR 799
Query: 256 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 315
+RVL FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FL
Sbjct: 800 ERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFL 859
Query: 316 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 375
LS RAGG+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE
Sbjct: 860 LSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEED 919
Query: 376 VRASAEHKL 384
+ A+ K+
Sbjct: 920 ILERAKKKM 928
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 166/384 (43%), Positives = 235/384 (61%), Gaps = 33/384 (8%)
Query: 11 LLYSREKIVHQ----KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLN 66
++ + E HQ KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L
Sbjct: 570 MIRTHEWTHHQTKRLKFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLY 627
Query: 67 ADLKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSP 126
L ++S+HRLL+TGTPLQN+L+ELW+LL+F++P F+S EDF + K E +
Sbjct: 628 KTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYAS-- 685
Query: 127 DEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLL 182
LH+ L PF+LRR+K VE LP K+E+++R E SA Y K +
Sbjct: 686 ----------------LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWI 729
Query: 183 MKRVEENL--GSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRL 240
+ R + L GS G++ G N +MEL+ CNH YL + + + + L ++R
Sbjct: 730 LTRNYKALSKGSKGSTSG--FLNIMMELKKCCNHCYLIKP-PDNNEFYNKQEALQHLIRS 786
Query: 241 CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGAL 300
GKL +LD+LL +L+ +RVL FS M R+LD++ +YL ++Q+ + RLDG G R
Sbjct: 787 SGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQA 846
Query: 301 IDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRD 360
+D FN + S F FLLS RAGG+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+
Sbjct: 847 LDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ 906
Query: 361 VLVLRFETVQTVEEQVRASAEHKL 384
V + R T +VEE + A+ K+
Sbjct: 907 VNIYRLVTKGSVEEDILERAKKKM 930
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 178/444 (40%), Positives = 251/444 (56%), Gaps = 44/444 (9%)
Query: 22 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 81
KF+VLLT+YE + D L I W +I+DE HR+KN K L Y H+LLLT
Sbjct: 844 KFHVLLTSYELITI--DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT 901
Query: 82 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 141
GTPLQNNLEEL+ LLNFL P F++ E F + F A +++E+ I
Sbjct: 902 GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF--------------ADIAKEDQ---IK 944
Query: 142 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEAS----AYQKLLMKRVEENLGSIGNSK 197
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L + G
Sbjct: 945 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGN 1004
Query: 198 GRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHY-LPPIVRLCGKLEMLDRLLPKLKA 256
S+ N VM+L+ CNHPYL + A E + Y ++R GKL +L ++L LK
Sbjct: 1005 QVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKE 1064
Query: 257 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 316
HRVL FS MT++LD++ED+L + Y+Y R+DG +G R ID+FN + F FLL
Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124
Query: 317 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 376
S RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE++
Sbjct: 1125 STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI 1184
Query: 377 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR----ECKKEEAAP--------- 423
A+ K+ + + + G + T + ++E L+ +L+ E K+EA
Sbjct: 1185 TQVAKKKMMLTHLVVRPG-LGSKTGSMSKQE-LDDILKFGTEELFKDEATDGGGDNKEGE 1242
Query: 424 -----VLDDDALNDLLARSESEID 442
DD A+ LL R++ E +
Sbjct: 1243 DSSVIHYDDKAIERLLDRNQDETE 1266
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.126 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 945,022,332
Number of Sequences: 539616
Number of extensions: 44059183
Number of successful extensions: 159550
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 2116
Number of HSP's that attempted gapping in prelim test: 136609
Number of HSP's gapped (non-prelim): 17073
length of query: 2442
length of database: 191,569,459
effective HSP length: 134
effective length of query: 2308
effective length of database: 119,260,915
effective search space: 275254191820
effective search space used: 275254191820
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 70 (31.6 bits)