Query 000073
Match_columns 2421
No_of_seqs 219 out of 295
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 12:57:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000073.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/000073hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hu3a_ a.118.1.14 (A:) Eukary 79.4 1.4 0.0001 48.6 7.6 185 968-1160 9-234 (243)
2 d1uw4b_ a.118.1.14 (B:) Regula 74.6 1.5 0.00011 49.1 6.0 189 968-1167 5-220 (248)
3 d1ug3a1 a.118.1.14 (A:1235-142 40.9 69 0.005 33.5 11.6 89 667-765 7-95 (193)
4 d1iqpa1 a.80.1.1 (A:233-327) R 31.5 35 0.0025 31.8 6.4 62 8-72 3-65 (95)
5 d1sxjd1 a.80.1.1 (D:263-353) R 29.2 26 0.0019 32.4 5.0 60 9-70 3-62 (91)
6 d1h2vc1 a.118.1.14 (C:29-290) 26.3 81 0.0059 34.6 9.4 100 972-1078 1-107 (262)
7 d1paqa_ a.118.1.14 (A:) Transl 18.6 1.6E+02 0.011 29.7 9.1 95 669-763 2-100 (161)
8 d1sxjc1 a.80.1.1 (C:239-333) R 18.6 86 0.0062 28.8 6.4 45 8-53 2-47 (95)
9 d1ujka_ a.118.9.2 (A:) ADP-rib 17.4 4.4E+02 0.032 25.7 12.4 37 1881-1921 109-145 (145)
10 d2nsza1 a.118.1.14 (A:322-450) 14.4 2.8E+02 0.02 26.8 9.3 88 669-765 6-93 (129)
No 1
>d1hu3a_ a.118.1.14 (A:) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.43 E-value=1.4 Score=48.59 Aligned_cols=185 Identities=11% Similarity=0.113 Sum_probs=111.9
Q ss_pred hhhhHhHhhhhhcCCcccHHHHHHHHHHHhh--hcchhHhHHHHHhhhcccCCcchHHHHHHHHHhCChh----------
Q 000073 968 SEVQDKISFIINNISALNVEAKAKEFTEILK--EQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKA---------- 1035 (2421)
Q Consensus 968 e~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L~--~~y~~WFA~YLV~kRasiEPN~H~LYl~fLd~l~~~~---------- 1035 (2421)
+++..+|.-++|-||++|++.=.+|+.+.-. ++-..=+++- |.++|-.||+|=.+|.++...+....
T Consensus 9 ~~l~r~v~~lLNKLt~~n~~~i~~ei~~l~~~~~~~l~~~v~~-I~~kai~e~~f~~~YA~Lc~~l~~~~~~~~~~~~~~ 87 (243)
T d1hu3a_ 9 QELFRKVRSILNKLTPQMFNQLMKQVSGLTVDTEERLKGVIDL-VFEKAIDEPSFSVAYANMCRCLVTLKVPMADKPGNT 87 (243)
T ss_dssp HHHHHHHHHHHTCSSCCCHHHHHHHHTTCCCCSHHHHHHHHHH-HHHHHHHCGGGHHHHHHHHHHHTTCCCC--------
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHccCHHHHHHHHHH-HHHHHHcCccccHHHHHHHHHHHHhcCccccccccc
Confidence 4567799999999999999999999987632 2222223333 55779999999999999999987642
Q ss_pred --HHHHHHHHHHHHHHHHhcc-------------------------cccccChHHHHHHHHhhhhhhhhhhhcCcccccC
Q 000073 1036 --LNREIVQATYENCKVLLGS-------------------------ELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAR 1088 (2421)
Q Consensus 1036 --L~~~Vl~eTy~~i~~LL~S-------------------------e~~~~ss~eRslLKNLGsWLG~iTLarNkPI~~k 1088 (2421)
+.+.+++.....-...... |........|....|+..++|.+..-+=-+.+.=
T Consensus 88 ~~F~~~Ll~~~q~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~k~~~~g~i~figeLy~~~~v~~~~i 167 (243)
T d1hu3a_ 88 VNFRKLLLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERTRLHDELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIM 167 (243)
T ss_dssp -CHHHHHHHHHHHHHHHHTC------------------------------CCSSHHHHHHHHHHHHHHHHTTTCSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhHhhhcccccccchHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHccccchHHHH
Confidence 3344444333322222111 0011112234555577788888775432222111
Q ss_pred CCChhhHHHHHHhcCceEEEechhhhcccccCCCccccCCCccH--HHHHHHHHHHhcCCcccchhHHHHHHHH
Q 000073 1089 EIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWT--MAILGLLAEIYSMPNLKMNLKFDIEVLF 1160 (2421)
Q Consensus 1089 ~ld~K~LLlEaY~~g~Li~VIPFVcKVLe~~~~SkVFkPPNPWt--m~IL~lL~Ely~~~~LKLnLKFEIEVL~ 1160 (2421)
.--++.|+ +.... --|-.+|.+|..|... +.-++|+. =.++.-|.++-..+++.--+||=|+-|.
T Consensus 168 ~~~l~~Ll-~~~~e----~~ie~l~~lL~~~G~~--L~~~~~~~~~~~~~~~l~~~~~~~~~s~Rirfml~~l~ 234 (243)
T d1hu3a_ 168 HDCVVKLL-KNHDE----ESLECLCRLLTTIGKD--LDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVI 234 (243)
T ss_dssp HHHHHHHH-HSCSH----HHHHHHHHHHHHHHHH--HCCTTTHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred HHHHHHhc-CCCCH----HHHHHHHHHHHHHHHH--HhccccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 11223332 22211 1255778888888754 34455553 3678888888888888888888887665
No 2
>d1uw4b_ a.118.1.14 (B:) Regulator of nonsense transcripts 2, UPF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.59 E-value=1.5 Score=49.07 Aligned_cols=189 Identities=12% Similarity=0.088 Sum_probs=123.4
Q ss_pred hhhhHhHhhhhhcCCcccHHHHHHHHHHHh--hhcchhHhHHHHHhhhcccCCcchHHHHHHHHHhC--ChhHHHHHHHH
Q 000073 968 SEVQDKISFIINNISALNVEAKAKEFTEIL--KEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVN--SKALNREIVQA 1043 (2421)
Q Consensus 968 e~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L--~~~y~~WFA~YLV~kRasiEPN~H~LYl~fLd~l~--~~~L~~~Vl~e 1043 (2421)
++.--|+ |+|.||+.|++.=+++++++= +++-..++...++. -+..+++|=.+|..++..|. .+.+-..++..
T Consensus 5 ~~flr~l--i~n~Ls~~n~~~i~~~i~kl~~~n~e~~~~li~~i~~-~~~~~~~~i~~yA~l~a~L~~~~~~f~~~~id~ 81 (248)
T d1uw4b_ 5 QEYVRKL--LYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMIN-IWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDG 81 (248)
T ss_dssp HHHHHHH--HHTTCSTTSHHHHHHHHHTSCTTSHHHHHHHHHHHHC-GGGSCGGGHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHH--HHhhCCHhHHHHHHHHHHHCCCCCHHHHHHHHHHHhh-hhcCchhHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 4444554 689999999999888887763 24556778886664 59999999999999999995 45677777778
Q ss_pred HHHHHHHHhcccccccChHHHHHHHHhhhhhhhhhhhcCcccccCCCChhhHHHHHHhcCceE---------EEechhhh
Q 000073 1044 TYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMI---------AVIPFTSK 1114 (2421)
Q Consensus 1044 Ty~~i~~LL~Se~~~~ss~eRslLKNLGsWLG~iTLarNkPI~~k~ld~K~LLlEaY~~g~Li---------~VIPFVcK 1114 (2421)
+.+.++.-+..++. .++...-+.-.++|-+..-+=-+...-.=-+..||-.+++.+.-. .-|=.+|+
T Consensus 82 l~e~f~~~~e~~~~----~~~~r~~~~v~figeLy~~~~v~~~~i~~~l~~Ll~~~~~~~~~~~~~d~~~d~~rIe~l~~ 157 (248)
T d1uw4b_ 82 VLEDIRLGMEVNQP----KFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVCT 157 (248)
T ss_dssp HHHHHHHHHHHCCG----GGHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTTCCTTSCCCSSSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHhcCCCcccccccCCCCcchhHHHHHHH
Confidence 88788777764422 333333344589999887665554443334556666666654210 11557999
Q ss_pred cccccCCCccccCCCccHHHHHH-HHH--H-----------HhcCCcccchhHHHHHHHHhhcCCCc
Q 000073 1115 ILEPCQSSLAYQPPNPWTMAILG-LLA--E-----------IYSMPNLKMNLKFDIEVLFKNLGVDM 1167 (2421)
Q Consensus 1115 VLe~~~~SkVFkPPNPWtm~IL~-lL~--E-----------ly~~~~LKLnLKFEIEVL~K~L~ldl 1167 (2421)
+|+.|..+- .+++...-+. .+. + +-+...+-.-++|-|+-|+.-.+=++
T Consensus 158 lL~t~G~~l----~~~~~~~~l~~~~~~fq~y~~~~~~~~~~~~~~~lp~ri~f~i~dll~lr~~~w 220 (248)
T d1uw4b_ 158 ILDTCGQYF----DRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLELLRPKI 220 (248)
T ss_dssp HHHHHGGGC----SSHHHHHHHHHHHHHHHHHHHHHHTSTTCCSSSCCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhHHh----cCccchhhHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhCCC
Confidence 999998773 2333322222 111 1 11234566778999999998776444
No 3
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.85 E-value=69 Score=33.52 Aligned_cols=89 Identities=8% Similarity=0.084 Sum_probs=66.2
Q ss_pred hhHHHHHHHHHHHHhccCCCHHHHHHHHHHhhcCCccccchhHHhHHHhhhhhhccCCCCcHHHHHHHHHHHHHhhhhhc
Q 000073 667 DDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQL 746 (2421)
Q Consensus 667 ~dIE~Ean~yfqkmYs~eisI~~iv~~L~r~K~S~~~rdqdiFaCMih~LFdEYrFf~~YP~~eL~~TAvLFG~lI~~~L 746 (2421)
+|+++++++..+.+|+. -.++|.+..++.++.. .-+ .++-.++|..-+| .-+++-..++.|+..+++.++
T Consensus 7 ee~~kk~~~il~Ey~~~-~D~~Ea~~~l~el~~p-~~~-~~~V~~~i~~~le-------~~~~~re~~~~Ll~~L~~~~~ 76 (193)
T d1ug3a1 7 EELEKKSKAIIEEYLHL-NDMKEAVQCVQELASP-SLL-FIFVRHGVESTLE-------RSAIAREHMGQLLHQLLCAGH 76 (193)
T ss_dssp HHHHHHHHHHHHHHHHH-CCHHHHHHHHHTTCCG-GGH-HHHHHHHHHHHTT-------TCHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhC-CCHHHHHHHHHHcCCc-hhH-HHHHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHCCC
Confidence 57888888888887775 3679999999888633 222 3344444444444 235566679999999999999
Q ss_pred cchhHHHHHHHHHHHHhcC
Q 000073 747 VTHLTLGIALRGVLDALRK 765 (2421)
Q Consensus 747 v~~~~L~iALr~VLeAlr~ 765 (2421)
|+.-.+.-|+.-+++.+.+
T Consensus 77 is~~~~~~gf~~~l~~l~D 95 (193)
T d1ug3a1 77 LSTAQYYQGLYEILELAED 95 (193)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhh
Confidence 9999999999999988765
No 4
>d1iqpa1 a.80.1.1 (A:233-327) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=31.48 E-value=35 Score=31.77 Aligned_cols=62 Identities=15% Similarity=0.227 Sum_probs=47.4
Q ss_pred cHHHHHHHHHhhhhhchHHHHHHHHHHH-HhccchhhHHHHhhhcccccCCCCCCCchHHHHHHHH
Q 000073 8 VPSQIRFLLQSLNEANADSVFRELCQFI-EYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVASV 72 (2421)
Q Consensus 8 ~~~qi~~Lv~~l~k~n~~~~~~el~qlv-~~G~ea~~~~L~~~l~~~~~~~~~~k~~~~~~Ll~~~ 72 (2421)
.+..|+.+++.+.++||+.....+.+++ ++|+.+.- ++..+.+.+- +.+..+..|..++...
T Consensus 3 ~P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~d-Il~~l~~~v~--~~~~~~~~k~~ll~~l 65 (95)
T d1iqpa1 3 RPEDIREMMLLALKGNFLKAREKLREILLKQGLSGED-VLVQMHKEVF--NLPIEEPKKVLLADKI 65 (95)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHGG--GSSSCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHh--hcCCCHHHHHHHHHHH
Confidence 4678999999999999999999999995 69999985 7777776552 1235566666665443
No 5
>d1sxjd1 a.80.1.1 (D:263-353) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.23 E-value=26 Score=32.36 Aligned_cols=60 Identities=5% Similarity=0.106 Sum_probs=46.2
Q ss_pred HHHHHHHHHhhhhhchHHHHHHHHHHHHhccchhhHHHHhhhcccccCCCCCCCchHHHHHH
Q 000073 9 PSQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVA 70 (2421)
Q Consensus 9 ~~qi~~Lv~~l~k~n~~~~~~el~qlv~~G~ea~~~~L~~~l~~~~~~~~~~k~~~~~~Ll~ 70 (2421)
...|..+++.+.++||+.....+..++..|+.+. -++..+.+.+-.+ .+..+.+|..++.
T Consensus 3 ~~~i~~il~~~~~~~f~~a~~~i~~l~~~Gys~~-dIl~~l~~~vv~~-~~i~~~~k~~i~~ 62 (91)
T d1sxjd1 3 HDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAA-SVVNQLHEYYITN-DNFDTNFKNQISW 62 (91)
T ss_dssp SHHHHHHHHHHHSCCHHHHHHHHHHHHHTSCCCT-THHHHHHHHHHHC-SSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHhc-CCCCHHHHHHHHH
Confidence 3568999999999999999999999998899998 4788887764222 2355666665544
No 6
>d1h2vc1 a.118.1.14 (C:29-290) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.27 E-value=81 Score=34.56 Aligned_cols=100 Identities=16% Similarity=0.208 Sum_probs=74.2
Q ss_pred HhHhhhhhcCCc---ccHHHHHHHHHHHhhhcch--hHhHHHHHhhhcccCCcchHHHHHHHHHhCC--hhHHHHHHHHH
Q 000073 972 DKISFIINNISA---LNVEAKAKEFTEILKEQYY--PWFAQYMVMKRASIEPNFHDLYLKFLDKVNS--KALNREIVQAT 1044 (2421)
Q Consensus 972 DKI~FIiNNlS~---~Nl~~K~~Elk~~L~~~y~--~WFA~YLV~kRasiEPN~H~LYl~fLd~l~~--~~L~~~Vl~eT 1044 (2421)
||+-.+||-|++ .++++.++++.+.+.++.- +.---=.+++-+...|.+-.+|.-++--+|. +++=+++++.+
T Consensus 1 drl~~LI~rige~~~~s~~~~ie~L~~~l~~~l~~~~~~il~~l~~~~~~~P~k~~~yA~Lv~llN~~~~e~g~~~l~~~ 80 (262)
T d1h2vc1 1 DHLESLICKVGEKSACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAM 80 (262)
T ss_dssp CHHHHHHHTTTSSCSSCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 567777887754 5667777888777766532 2222224567788899999999999887774 46889999999
Q ss_pred HHHHHHHhcccccccChHHHHHHHHhhhhhhhhh
Q 000073 1045 YENCKVLLGSELIKSSSEERSLLKNLGSWLGKLT 1078 (2421)
Q Consensus 1045 y~~i~~LL~Se~~~~ss~eRslLKNLGsWLG~iT 1078 (2421)
.++.+..+++. +..-.||+-.+||.+.
T Consensus 81 ~~~f~~~l~~~-------~~~~~~~llrFla~L~ 107 (262)
T d1h2vc1 81 IRQLKESLKAN-------NYNEAVYLVRFLSDLV 107 (262)
T ss_dssp HHHHHHHHHTT-------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-------CHHHHHHHHHHHHHHc
Confidence 99999888863 4667888888888884
No 7
>d1paqa_ a.118.1.14 (A:) Translation initiation factor eIF-2b epsilon {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=18.62 E-value=1.6e+02 Score=29.66 Aligned_cols=95 Identities=13% Similarity=0.120 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHhhcCCccccchhHHhHHHhhhhhhccCC----CCcHHHHHHHHHHHHHhhhh
Q 000073 669 IEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFP----KYPERQLRIAAVLFGSIIKH 744 (2421)
Q Consensus 669 IE~Ean~yfqkmYs~eisI~~iv~~L~r~K~S~~~rdqdiFaCMih~LFdEYrFf~----~YP~~eL~~TAvLFG~lI~~ 744 (2421)
-.+|+-.-++|-+....++|.++-.|+-+|-|-|--+.||=.|++..+.+--.-++ .=+.++++..=.=||.+++.
T Consensus 2 F~~Ev~~sl~r~~ee~~~~dn~iLElnslr~a~N~~~~dv~~av~~All~~i~~~~~~~~~~~~~~~~~~l~k~~~ll~~ 81 (161)
T d1paqa_ 2 FEKEGIATVERAMENNHDLDTALLELNTLRMSMNVTYHEVRIATITALLRRVYHFIATQTLGPKDAVVKVFNQWGLLFKR 81 (161)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHGGGGGG
T ss_pred hHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999998888888876332211 11223333222334666666
Q ss_pred hccchhHHHHHHHHHHHHh
Q 000073 745 QLVTHLTLGIALRGVLDAL 763 (2421)
Q Consensus 745 ~Lv~~~~L~iALr~VLeAl 763 (2421)
-+-+.-...-+|..|.+.+
T Consensus 82 ~~~~~~~q~~~L~~lq~~c 100 (161)
T d1paqa_ 82 QAFDEEEYIDLMNIIMEKI 100 (161)
T ss_dssp TCCSHHHHHHHHHHHHHHH
T ss_pred HcCCcHHHHHHHHHHHHHH
Confidence 5444333333455555554
No 8
>d1sxjc1 a.80.1.1 (C:239-333) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=18.60 E-value=86 Score=28.85 Aligned_cols=45 Identities=18% Similarity=0.256 Sum_probs=39.3
Q ss_pred cHHHHHHHHHhhhhhchHHHHHHHHHHH-HhccchhhHHHHhhhccc
Q 000073 8 VPSQIRFLLQSLNEANADSVFRELCQFI-EYGIEGSTMMLQTCMDHL 53 (2421)
Q Consensus 8 ~~~qi~~Lv~~l~k~n~~~~~~el~qlv-~~G~ea~~~~L~~~l~~~ 53 (2421)
.+..|..+++.+-++||+..+..+.+++ ++|+.+.- +++.+.+.+
T Consensus 2 ~P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~d-Il~~l~~~i 47 (95)
T d1sxjc1 2 RPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALID-LIEGIVKIL 47 (95)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTCCHHH-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHH
Confidence 3567999999999999999999999996 69999984 888888765
No 9
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.37 E-value=4.4e+02 Score=25.75 Aligned_cols=37 Identities=16% Similarity=0.314 Sum_probs=30.1
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHcCccc
Q 000073 1881 GFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLK 1921 (2421)
Q Consensus 1881 ~~~eq~~~lF~EWv~l~~~~~~~~~~~~~Fi~qL~~~giL~ 1921 (2421)
..++++-.++.+|-.-+ | ++..+..--.+|..+||++
T Consensus 109 ~Vk~kil~li~~W~~~f--p--~~~~~~~~Y~~L~~~Gii~ 145 (145)
T d1ujka_ 109 KVKNKILELLYSWTVGL--P--EEVKIAEAYQMLKKQGIVK 145 (145)
T ss_dssp HHHHHHHHHHHHHHHHC--T--TCHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHC--C--CchHHHHHHHHHHHCCCcC
Confidence 46899999999998755 3 4667777788999999975
No 10
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=14.39 E-value=2.8e+02 Score=26.79 Aligned_cols=88 Identities=13% Similarity=0.171 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHhhcCCccccchhHHhHHHhhhhhhccCCCCcHHHHHHHHHHHHHhhhhhccc
Q 000073 669 IEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVT 748 (2421)
Q Consensus 669 IE~Ean~yfqkmYs~eisI~~iv~~L~r~K~S~~~rdqdiFaCMih~LFdEYrFf~~YP~~eL~~TAvLFG~lI~~~Lv~ 748 (2421)
..+++++..+-.++ .-.++|.+.-++.++ ++.-+..=|...+.++| |. =+.+.-..++.||..+...++|+
T Consensus 6 l~kk~~~ll~EY~~-~~D~~Ea~~~l~eL~-~p~~~~e~V~~~i~~al-e~------~~~~r~~~~~~Ll~~L~~~~~is 76 (129)
T d2nsza1 6 LVKEIDMLLKEYLL-SGDISEAEHCLKELE-VPHFHHELVYEAIVMVL-ES------TGESAFKMILDLLKSLWKSSTIT 76 (129)
T ss_dssp HHHHHHHHHHHHHH-HCCHHHHHHHHHHHT-CGGGHHHHHHHHHHHHH-HC------CSSHHHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHh-CCCHHHHHHHHHHcC-CchhhHHHHHHHHHHHH-hc------CCHHHHHHHHHHHHHHHHCCCCC
Confidence 44555555555554 234788888888886 33333333445555554 32 13333456899999999999999
Q ss_pred hhHHHHHHHHHHHHhcC
Q 000073 749 HLTLGIALRGVLDALRK 765 (2421)
Q Consensus 749 ~~~L~iALr~VLeAlr~ 765 (2421)
.-.+..|+..+++.+.+
T Consensus 77 ~~~i~~Gf~~~l~~l~D 93 (129)
T d2nsza1 77 IDQMKRGYERIYNEIPD 93 (129)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcH
Confidence 99999999999987754
Done!