Query 000075
Match_columns 2419
No_of_seqs 206 out of 288
Neff 5.8
Searched_HMMs 13730
Date Mon Mar 25 13:10:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000075.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/000075hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hu3a_ a.118.1.14 (A:) Eukary 79.6 1.4 0.0001 48.5 7.7 185 968-1160 9-234 (243)
2 d1uw4b_ a.118.1.14 (B:) Regula 72.8 1.7 0.00012 48.5 5.9 189 968-1167 5-220 (248)
3 d1ug3a1 a.118.1.14 (A:1235-142 37.6 50 0.0036 34.7 9.8 89 667-765 7-95 (193)
4 d1h2vc1 a.118.1.14 (C:29-290) 25.9 84 0.0061 34.5 9.4 100 972-1078 1-107 (262)
5 d1iqpa1 a.80.1.1 (A:233-327) R 24.9 48 0.0035 30.7 6.1 62 8-72 3-65 (95)
6 d1sxjd1 a.80.1.1 (D:263-353) R 20.2 44 0.0032 30.7 4.6 59 10-70 4-62 (91)
7 d1paqa_ a.118.1.14 (A:) Transl 19.3 1.5E+02 0.011 29.9 9.0 96 668-763 1-100 (161)
8 d1sxjc1 a.80.1.1 (C:239-333) R 15.8 1E+02 0.0073 28.3 6.1 45 8-53 2-47 (95)
9 d2nsza1 a.118.1.14 (A:322-450) 15.6 2.5E+02 0.018 27.1 9.4 88 669-765 6-93 (129)
10 d1ujka_ a.118.9.2 (A:) ADP-rib 15.1 5E+02 0.036 25.3 12.4 37 1879-1919 109-145 (145)
No 1
>d1hu3a_ a.118.1.14 (A:) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.60 E-value=1.4 Score=48.52 Aligned_cols=185 Identities=11% Similarity=0.118 Sum_probs=111.7
Q ss_pred hhhhHhHhhhhhcCCcccHHHHHHHHHHHhh--hcchhHhHHHHHhhhcccCCcchHHHHHHHHHhCchh----------
Q 000075 968 SEVQDKISFIINNISALNVEAKAKEFTEILK--EQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKA---------- 1035 (2419)
Q Consensus 968 e~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L~--~~y~~WFA~YLV~kRasiEPNfH~LYl~fLd~l~~~~---------- 1035 (2419)
+++..+|..++|-||++|++.=.+|+.++-. ++-..=+++ +|.++|-.||+|=.+|.++...+....
T Consensus 9 ~~l~r~v~~lLNKLt~~n~~~i~~ei~~l~~~~~~~l~~~v~-~I~~kai~e~~f~~~YA~Lc~~l~~~~~~~~~~~~~~ 87 (243)
T d1hu3a_ 9 QELFRKVRSILNKLTPQMFNQLMKQVSGLTVDTEERLKGVID-LVFEKAIDEPSFSVAYANMCRCLVTLKVPMADKPGNT 87 (243)
T ss_dssp HHHHHHHHHHHTCSSCCCHHHHHHHHTTCCCCSHHHHHHHHH-HHHHHHHHCGGGHHHHHHHHHHHTTCCCC--------
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHccCHHHHHHHHH-HHHHHHHcCccccHHHHHHHHHHHHhcCccccccccc
Confidence 4667799999999999999999999987632 222222333 355779999999999999999987642
Q ss_pred --HHHHHHHHHHHHHHHHhcc-------------------------hhhccChHHHHHHHHhhhhhhhhhhhcCcccccC
Q 000075 1036 --LNREIVQATYENCKVLLGS-------------------------ELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAR 1088 (2419)
Q Consensus 1036 --L~~~Vl~eTy~ni~~LL~S-------------------------e~~~~ssseRslLKNLGsWLG~iTLarNkPI~~k 1088 (2419)
+.+.+++.....-...... |........|....|+..++|.+..-+=-+...=
T Consensus 88 ~~F~~~Ll~~~q~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~k~~~~g~i~figeLy~~~~v~~~~i 167 (243)
T d1hu3a_ 88 VNFRKLLLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERTRLHDELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIM 167 (243)
T ss_dssp -CHHHHHHHHHHHHHHHHTC------------------------------CCSSHHHHHHHHHHHHHHHHTTTCSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhHhhhcccccccchHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHccccchHHHH
Confidence 3444444433322222111 0011112234555577778888775432222111
Q ss_pred CCChhhHHHHHHhcCceEEEechhhhcccccCCCccccCCCccH--HHHHHHHHHHhcCCcccchhHHHHHHHH
Q 000075 1089 EIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWT--MAILGLLAEIYSMPNLKMNLKFDIEVLF 1160 (2419)
Q Consensus 1089 ~ld~K~LL~eaY~~g~L~~VIPFV~KVLe~c~~S~vFkPPNPWt--m~IL~lL~Ely~~~~LKlnLKFEIEVL~ 1160 (2419)
.--++.|+ +.... --|-.+|.+|..|... +.-++|+. =.++.-|.++-..+++.--+||=|+-|.
T Consensus 168 ~~~l~~Ll-~~~~e----~~ie~l~~lL~~~G~~--L~~~~~~~~~~~~~~~l~~~~~~~~~s~Rirfml~~l~ 234 (243)
T d1hu3a_ 168 HDCVVKLL-KNHDE----ESLECLCRLLTTIGKD--LDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVI 234 (243)
T ss_dssp HHHHHHHH-HSCSH----HHHHHHHHHHHHHHHH--HCCTTTHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred HHHHHHhc-CCCCH----HHHHHHHHHHHHHHHH--HhccccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 11223332 22111 1255778888888754 34455654 3678888888888888888888887665
No 2
>d1uw4b_ a.118.1.14 (B:) Regulator of nonsense transcripts 2, UPF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.78 E-value=1.7 Score=48.47 Aligned_cols=189 Identities=12% Similarity=0.082 Sum_probs=122.5
Q ss_pred hhhhHhHhhhhhcCCcccHHHHHHHHHHHh--hhcchhHhHHHHHhhhcccCCcchHHHHHHHHHhC--chhHHHHHHHH
Q 000075 968 SEVQDKISFIINNISALNVEAKAKEFTEIL--KEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVN--SKALNREIVQA 1043 (2419)
Q Consensus 968 e~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L--~~~y~~WFA~YLV~kRasiEPNfH~LYl~fLd~l~--~~~L~~~Vl~e 1043 (2419)
++.--|+ |.|.||+.|++.=+++++++= +++-..++...++. -+..+++|=.+|..++..|. .+++-..++..
T Consensus 5 ~~flr~l--i~n~Ls~~n~~~i~~~i~kl~~~n~e~~~~li~~i~~-~~~~~~~~i~~yA~l~a~L~~~~~~f~~~~id~ 81 (248)
T d1uw4b_ 5 QEYVRKL--LYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMIN-IWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDG 81 (248)
T ss_dssp HHHHHHH--HHTTCSTTSHHHHHHHHHTSCTTSHHHHHHHHHHHHC-GGGSCGGGHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHH--HHhhCCHhHHHHHHHHHHHCCCCCHHHHHHHHHHHhh-hhcCchhHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 4444454 689999999999888887763 24556778886664 59999999999999999995 45677777888
Q ss_pred HHHHHHHHhcchhhccChHHHHHHHHhhhhhhhhhhhcCcccccCCCChhhHHHHHHhcCceE---------EEechhhh
Q 000075 1044 TYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMI---------AVIPFTSK 1114 (2419)
Q Consensus 1044 Ty~ni~~LL~Se~~~~ssseRslLKNLGsWLG~iTLarNkPI~~k~ld~K~LL~eaY~~g~L~---------~VIPFV~K 1114 (2419)
+.+.++.-+..++. .++...-+.-.++|-+..-+=-+...-.=-+..||-.+++.+.-. .-|=.+|+
T Consensus 82 l~e~f~~~~e~~~~----~~~~r~~~~v~figeLy~~~~v~~~~i~~~l~~Ll~~~~~~~~~~~~~d~~~d~~rIe~l~~ 157 (248)
T d1uw4b_ 82 VLEDIRLGMEVNQP----KFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVCT 157 (248)
T ss_dssp HHHHHHHHHHHCCG----GGHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTTCCTTSCCCSSSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHhcCCCcccccccCCCCcchhHHHHHHH
Confidence 88887777664322 233333344589998886655544443334556665566654210 11557999
Q ss_pred cccccCCCccccCCCccHHHHHH-HHH-------------HHhcCCcccchhHHHHHHHHhhcCCCc
Q 000075 1115 ILEPCQSSLAYQPPNPWTMAILG-LLA-------------EIYSMPNLKMNLKFDIEVLFKNLGVDM 1167 (2419)
Q Consensus 1115 VLe~c~~S~vFkPPNPWtm~IL~-lL~-------------Ely~~~~LKlnLKFEIEVL~K~L~ld~ 1167 (2419)
+|+.|..+. .+++...-+. .+. ++-+...+-.-++|-|+-|+.-.+=++
T Consensus 158 lL~t~G~~l----~~~~~~~~l~~~~~~fq~y~~~~~~~~~~~~~~~lp~ri~f~i~dll~lr~~~w 220 (248)
T d1uw4b_ 158 ILDTCGQYF----DRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLELLRPKI 220 (248)
T ss_dssp HHHHHGGGC----SSHHHHHHHHHHHHHHHHHHHHHHTSTTCCSSSCCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhHHh----cCccchhhHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhCCC
Confidence 999998773 2333322222 111 111234466778999999997776444
No 3
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.56 E-value=50 Score=34.67 Aligned_cols=89 Identities=8% Similarity=0.084 Sum_probs=65.9
Q ss_pred hhHHHHHHHHHHHHhccCCCHHHHHHHHHHhhcCCccccchhHHHHHHhhhhhhccCCCCcHHHHHHHHHHHHHhhhhhc
Q 000075 667 DDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQL 746 (2419)
Q Consensus 667 ~dIE~Ean~yfqkmYs~eisI~~iV~~L~r~K~S~~~rdqdvFaCMIh~LFdEYrFf~~YP~~eL~iTAvLFGslI~~~L 746 (2419)
+|+++++++..+.+|+. -.++|.+..++.++.. .-+ .++-.++|..-+| .-+++-..++.|+..|++.++
T Consensus 7 ee~~kk~~~il~Ey~~~-~D~~Ea~~~l~el~~p-~~~-~~~V~~~i~~~le-------~~~~~re~~~~Ll~~L~~~~~ 76 (193)
T d1ug3a1 7 EELEKKSKAIIEEYLHL-NDMKEAVQCVQELASP-SLL-FIFVRHGVESTLE-------RSAIAREHMGQLLHQLLCAGH 76 (193)
T ss_dssp HHHHHHHHHHHHHHHHH-CCHHHHHHHHHTTCCG-GGH-HHHHHHHHHHHTT-------TCHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhC-CCHHHHHHHHHHcCCc-hhH-HHHHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHCCC
Confidence 57888888888887775 3679999999888633 222 3344444444444 235566679999999999999
Q ss_pred cchhHHHHHHHHHHHHhcC
Q 000075 747 VTHLTLGIALRGVLDALRK 765 (2419)
Q Consensus 747 v~~~~L~iALr~ILeAlrk 765 (2419)
|+.-.+.-|+.-+++.+.+
T Consensus 77 is~~~~~~gf~~~l~~l~D 95 (193)
T d1ug3a1 77 LSTAQYYQGLYEILELAED 95 (193)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhh
Confidence 9999999999999887765
No 4
>d1h2vc1 a.118.1.14 (C:29-290) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.85 E-value=84 Score=34.45 Aligned_cols=100 Identities=16% Similarity=0.208 Sum_probs=73.8
Q ss_pred HhHhhhhhcCCc---ccHHHHHHHHHHHhhhcch--hHhHHHHHhhhcccCCcchHHHHHHHHHhCc--hhHHHHHHHHH
Q 000075 972 DKISFIINNISA---LNVEAKAKEFTEILKEQYY--PWFAQYMVMKRASIEPNFHDLYLKFLDKVNS--KALNREIVQAT 1044 (2419)
Q Consensus 972 DKI~FIiNNlS~---~Nl~~K~~Elk~~L~~~y~--~WFA~YLV~kRasiEPNfH~LYl~fLd~l~~--~~L~~~Vl~eT 1044 (2419)
||+-.+||-|++ .++++.++++.+.+.++.- +.---=.+++-+...|.+-.+|.-++--+|. +++=+++++.+
T Consensus 1 drl~~LI~rige~~~~s~~~~ie~L~~~l~~~l~~~~~~il~~l~~~~~~~P~k~~~yA~Lv~llN~~~~e~g~~~l~~~ 80 (262)
T d1h2vc1 1 DHLESLICKVGEKSACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAM 80 (262)
T ss_dssp CHHHHHHHTTTSSCSSCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 567777887754 5667777888777766532 2222224567788899999999999887774 46889999999
Q ss_pred HHHHHHHhcchhhccChHHHHHHHHhhhhhhhhh
Q 000075 1045 YENCKVLLGSELIKSSSEERSLLKNLGSWLGKLT 1078 (2419)
Q Consensus 1045 y~ni~~LL~Se~~~~ssseRslLKNLGsWLG~iT 1078 (2419)
.++.+..+++. +..-.||+-.+||.+.
T Consensus 81 ~~~f~~~l~~~-------~~~~~~~llrFla~L~ 107 (262)
T d1h2vc1 81 IRQLKESLKAN-------NYNEAVYLVRFLSDLV 107 (262)
T ss_dssp HHHHHHHHHTT-------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-------CHHHHHHHHHHHHHHc
Confidence 99998888753 4566888888888874
No 5
>d1iqpa1 a.80.1.1 (A:233-327) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=24.93 E-value=48 Score=30.71 Aligned_cols=62 Identities=15% Similarity=0.227 Sum_probs=47.2
Q ss_pred cHHHHHHHHHhhhhhchHHHHHHHHHHH-hhccchhhHHHhhhhcccccCCCCCCCchHHHHHHHH
Q 000075 8 VPSQIRFLLQSLNEANADSVFRELCQFI-EYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVASV 72 (2419)
Q Consensus 8 ~~~qi~~l~~~~~~~n~~~~~~el~~~~-~~g~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ll~~~ 72 (2419)
-+..|+.+++.+.++||+.....+.+++ ++|+.+.- ++..+.+.+- ..+..+..|..++...
T Consensus 3 ~P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~d-Il~~l~~~v~--~~~~~~~~k~~ll~~l 65 (95)
T d1iqpa1 3 RPEDIREMMLLALKGNFLKAREKLREILLKQGLSGED-VLVQMHKEVF--NLPIEEPKKVLLADKI 65 (95)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHGG--GSSSCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHh--hcCCCHHHHHHHHHHH
Confidence 4678999999999999999999999985 79999985 7777766552 2235566676665543
No 6
>d1sxjd1 a.80.1.1 (D:263-353) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.23 E-value=44 Score=30.68 Aligned_cols=59 Identities=5% Similarity=0.130 Sum_probs=45.2
Q ss_pred HHHHHHHHhhhhhchHHHHHHHHHHHhhccchhhHHHhhhhcccccCCCCCCCchHHHHHH
Q 000075 10 SQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVA 70 (2419)
Q Consensus 10 ~qi~~l~~~~~~~n~~~~~~el~~~~~~g~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ll~ 70 (2419)
..|..++..+.++||+.....+..++..|..+.- ++..+.+.+-.. .+..+.+|..++.
T Consensus 4 ~~i~~il~~~~~~~f~~a~~~i~~l~~~Gys~~d-Il~~l~~~vv~~-~~i~~~~k~~i~~ 62 (91)
T d1sxjd1 4 DILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAAS-VVNQLHEYYITN-DNFDTNFKNQISW 62 (91)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHTSCCCTT-HHHHHHHHHHHC-SSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHhc-CCCCHHHHHHHHH
Confidence 4688999999999999999999999988999984 777777664322 2355666665554
No 7
>d1paqa_ a.118.1.14 (A:) Translation initiation factor eIF-2b epsilon {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=19.30 E-value=1.5e+02 Score=29.88 Aligned_cols=96 Identities=14% Similarity=0.135 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHHhccCCCHHHHHHHHHHhhcCCccccchhHHHHHHhhhhhhccCC----CCcHHHHHHHHHHHHHhhh
Q 000075 668 DIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFP----KYPERQLRIAAVLFGSIIK 743 (2419)
Q Consensus 668 dIE~Ean~yfqkmYs~eisI~~iV~~L~r~K~S~~~rdqdvFaCMIh~LFdEYrFf~----~YP~~eL~iTAvLFGslI~ 743 (2419)
|..+|+-.-++|-+....++|.+|-.|+-+|-|-|--+.||=.|++..+.+--.-++ .=+.++++..=.=||.+++
T Consensus 1 eF~~Ev~~sl~r~~ee~~~~dn~iLElnslr~a~N~~~~dv~~av~~All~~i~~~~~~~~~~~~~~~~~~l~k~~~ll~ 80 (161)
T d1paqa_ 1 DFEKEGIATVERAMENNHDLDTALLELNTLRMSMNVTYHEVRIATITALLRRVYHFIATQTLGPKDAVVKVFNQWGLLFK 80 (161)
T ss_dssp CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHGGGGG
T ss_pred ChHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999999998888888876432221 1122233222233466666
Q ss_pred hhccchhHHHHHHHHHHHHh
Q 000075 744 HQLVTHLTLGIALRGVLDAL 763 (2419)
Q Consensus 744 ~~Lv~~~~L~iALr~ILeAl 763 (2419)
.-+-+.-...-+|..|.+.+
T Consensus 81 ~~~~~~~~q~~~L~~lq~~c 100 (161)
T d1paqa_ 81 RQAFDEEEYIDLMNIIMEKI 100 (161)
T ss_dssp GTCCSHHHHHHHHHHHHHHH
T ss_pred HHcCCcHHHHHHHHHHHHHH
Confidence 65544333334455555555
No 8
>d1sxjc1 a.80.1.1 (C:239-333) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=15.80 E-value=1e+02 Score=28.33 Aligned_cols=45 Identities=18% Similarity=0.256 Sum_probs=39.1
Q ss_pred cHHHHHHHHHhhhhhchHHHHHHHHHHH-hhccchhhHHHhhhhccc
Q 000075 8 VPSQIRFLLQSLNEANADSVFRELCQFI-EYGIEGSTMMLQTCMDHL 53 (2419)
Q Consensus 8 ~~~qi~~l~~~~~~~n~~~~~~el~~~~-~~g~~~~~~~l~~~~~~~ 53 (2419)
.+..|..+++.+.+++|+..+..+.+++ ++|+.+.- +++.+.+.+
T Consensus 2 ~P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~d-Il~~l~~~i 47 (95)
T d1sxjc1 2 RPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALID-LIEGIVKIL 47 (95)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTCCHHH-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHH
Confidence 4678999999999999999999999986 79999985 778877755
No 9
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.59 E-value=2.5e+02 Score=27.09 Aligned_cols=88 Identities=13% Similarity=0.172 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHhhcCCccccchhHHHHHHhhhhhhccCCCCcHHHHHHHHHHHHHhhhhhccc
Q 000075 669 IEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVT 748 (2419)
Q Consensus 669 IE~Ean~yfqkmYs~eisI~~iV~~L~r~K~S~~~rdqdvFaCMIh~LFdEYrFf~~YP~~eL~iTAvLFGslI~~~Lv~ 748 (2419)
..+++++..+-.++. -.++|.+.-++.++ ++.-+..=|...+.++| |. =+.+.-..++.||..+...++|+
T Consensus 6 l~kk~~~ll~EY~~~-~D~~Ea~~~l~eL~-~p~~~~e~V~~~i~~al-e~------~~~~r~~~~~~Ll~~L~~~~~is 76 (129)
T d2nsza1 6 LVKEIDMLLKEYLLS-GDISEAEHCLKELE-VPHFHHELVYEAIVMVL-ES------TGESAFKMILDLLKSLWKSSTIT 76 (129)
T ss_dssp HHHHHHHHHHHHHHH-CCHHHHHHHHHHHT-CGGGHHHHHHHHHHHHH-HC------CSSHHHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHhC-CCHHHHHHHHHHcC-CchhhHHHHHHHHHHHH-hc------CCHHHHHHHHHHHHHHHHCCCCC
Confidence 445555555555542 34788888888886 33334333445555554 32 13333456899999999999999
Q ss_pred hhHHHHHHHHHHHHhcC
Q 000075 749 HLTLGIALRGVLDALRK 765 (2419)
Q Consensus 749 ~~~L~iALr~ILeAlrk 765 (2419)
.-.+..|+..+++.+.+
T Consensus 77 ~~~i~~Gf~~~l~~l~D 93 (129)
T d2nsza1 77 IDQMKRGYERIYNEIPD 93 (129)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcH
Confidence 99999999999887754
No 10
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.14 E-value=5e+02 Score=25.33 Aligned_cols=37 Identities=16% Similarity=0.314 Sum_probs=30.3
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHcCccc
Q 000075 1879 GFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLK 1919 (2419)
Q Consensus 1879 ~~~eq~~~lF~EWv~l~~~~~~~d~~~~~Fi~qL~~~giL~ 1919 (2419)
..++++-.++.+|-.-+ | ++..+..-..+|..+||++
T Consensus 109 ~Vk~kil~li~~W~~~f--p--~~~~~~~~Y~~L~~~Gii~ 145 (145)
T d1ujka_ 109 KVKNKILELLYSWTVGL--P--EEVKIAEAYQMLKKQGIVK 145 (145)
T ss_dssp HHHHHHHHHHHHHHHHC--T--TCHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHC--C--CchHHHHHHHHHHHCCCcC
Confidence 46899999999998755 3 4677778888999999975
Done!