Your job contains 1 sequence.
>000077
MLRLSSTVPSQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGL
KNPQLESVVASVFKYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLA
LSDSENLDALMCGKNFCMAQIERLCANPVPMNSAEQIQNIIMFLQRSSDLSKHVDSLMQI
LSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEMSMGDVMN
ELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCST
MSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQ
EPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQAN
HAWLCLDLLDVLCQLSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFA
VFPMIIKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEM
IPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPF
HHSGALLNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGEAADSS
TSEGYADDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEY
RFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALE
QFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERALARISSGHLESDGASNPAAHQHVS
SQATSGNGEVSGSGITQLGQQLSSQIQLQQRSESVVDDRHKVSAASSSDMKPLLSSIGQP
SSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRE
TPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNF
HDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIG
RNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLA
EIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQ
LVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGI
SDQLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMD
RAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCK
EPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEI
AQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVRLPWQN
QSSQGSHAMSAGSLTSSGDAAQASAYGLAGGQGNQGYSSSAGSTGFDAVSRPSDVASGTT
ESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEPGASSQS
LPSTAAPERIGSSILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIIL
RCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTSWVIYSDE
ERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVIS
ELHNLVDALAKLIEIVRNPAANANASSGATTAKDDKARQSKDKKAYSHTTANREDYNIPE
SVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRL
TEVSVAHCLSSEVINPGTLQSPQQSQSLSFLAIDIYAKLMLSILKCCPVEQGSSKIFLLS
KILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFH
VLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELG
VPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDP
STPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLP
PSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQ
TLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERL
IVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSMVS
GWVPDNTH
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000077
(2408 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040915-1 - symbol:cnot1 "CCR4-NOT transcrip... 1480 0. 5
UNIPROTKB|F1MHU9 - symbol:CNOT1 "Uncharacterized protein"... 1474 0. 5
UNIPROTKB|A5YKK6 - symbol:CNOT1 "CCR4-NOT transcription c... 1474 0. 5
MGI|MGI:2442402 - symbol:Cnot1 "CCR4-NOT transcription co... 1474 0. 5
UNIPROTKB|F1RFU3 - symbol:CNOT1 "Uncharacterized protein"... 1471 0. 5
UNIPROTKB|G3V7M0 - symbol:Cnot1 "RCG39079" species:10116 ... 1470 0. 5
UNIPROTKB|E1BXD4 - symbol:LOC100858397 "Uncharacterized p... 1474 8.9e-311 5
DICTYBASE|DDB_G0276029 - symbol:DDB_G0276029 "putative CC... 1230 4.3e-303 7
FB|FBgn0085436 - symbol:Not1 "Not1" species:7227 "Drosoph... 1342 3.6e-269 6
WB|WBGene00002845 - symbol:let-711 species:6239 "Caenorha... 1067 9.6e-196 4
ASPGD|ASPL0000078074 - symbol:AN4965 species:162425 "Emer... 767 8.4e-187 5
GENEDB_PFALCIPARUM|PF11_0049 - symbol:PF11_0049 "hypothet... 968 1.5e-186 7
UNIPROTKB|Q8IIW4 - symbol:PF11_0049 "NOT family protein, ... 968 1.5e-186 7
POMBASE|SPAC20G8.06 - symbol:not1 "CCR4-Not complex subun... 654 2.4e-152 5
SGD|S000000689 - symbol:CDC39 "Component of the CCR4-NOT ... 636 2.0e-145 7
CGD|CAL0001252 - symbol:CDC39 species:5476 "Candida albic... 496 7.9e-143 5
UNIPROTKB|Q59R01 - symbol:CDC39 "Potential mRNA deadenyla... 496 7.9e-143 5
RGD|1308009 - symbol:Cnot1 "CCR4-NOT transcription comple... 1275 1.1e-128 1
DICTYBASE|DDB_G0287399 - symbol:DDB_G0287399 species:4468... 125 0.00087 1
>ZFIN|ZDB-GENE-040915-1 [details] [associations]
symbol:cnot1 "CCR4-NOT transcription complex, subunit
1" species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] ZFIN:ZDB-GENE-040915-1
InterPro:IPR007196 InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 EMBL:CU468035 IPI:IPI00829204
Ensembl:ENSDART00000017536 ArrayExpress:F1QAM0 Bgee:F1QAM0
Uniprot:F1QAM0
Length = 2375
Score = 1480 (526.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 335/768 (43%), Positives = 463/768 (60%)
Query: 1653 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASN---NL 1708
Q L A+ A + Q + S + +++ SRD AAL + QK +GL + S L
Sbjct: 1621 QHLHAIPPALAMNPQTQAIRSLLEAVVMARNSRDGIAALGLLQKAVEGLLDATSGADPEL 1680
Query: 1709 HFS---AHLAILAAIRDVC----KLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1761
S HL +L A++D + K++T +I +E K+N + LIR+ L+N+
Sbjct: 1681 LLSYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1740
Query: 1762 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVV-ISELHNLVDALAKLIEIVRNPX 1820
+Y++H+A+ ++ G N A FA+ L++ L+ DE V I+E D + ++R
Sbjct: 1741 QYDLHLAQSMENGLNYMAVAFAMQLVKLLLVDERSVSHITE----ADLFHTIETLMRTSA 1796
Query: 1821 XXXXXXXXXXXXKDDKARQSKDKKAYSHTTA-NREDYN-IPESVD-PDPVGFPEQVSMLF 1877
D R + + H N ++ I ++ + DP G E+ L
Sbjct: 1797 HSRANAPEGLPQLMDVVRSNYEAMIDRHHGGPNFMMHSGISQASEYDDPPGLREKAEYLL 1856
Query: 1878 AEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTE--VSVAHCLSSE 1932
EW Y + A + +V Q+HQ G+LK DD+ RFFR TE V +++ +E
Sbjct: 1857 REWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAE 1916
Query: 1933 VINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIFLLSKILTVTVKFIL 1991
+P T + +D + +L+ ++K + +KI LL+K+L + V ++
Sbjct: 1917 QQHPTTSPAIIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLI 1974
Query: 1992 KDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFS 2051
+D + ++ F PY R+FI LL++++ + V + NFQ L+AF N FH+L+P K P F
Sbjct: 1975 QDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFV 2034
Query: 2052 FAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGT 2110
+AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN EL P++ LYKGT
Sbjct: 2035 YAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPMQILYKGT 2094
Query: 2111 LRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLL 2170
LRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMRLPDP TPNLK+D+L
Sbjct: 2095 LRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDML 2154
Query: 2171 PEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTR 2230
EI PRI + + + Q + D+D YLKT P +FLSEL+ L + + G R
Sbjct: 2155 SEINIAPRILTNFTGVMPS-QFKKDLDSYLKTRSP-VTFLSELRSNLQV----SNEPGNR 2208
Query: 2231 YNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEG 2290
YN+ LIN+LVLYVG QAI +H + G+ S++ SA +DIFQ L DLDTEG
Sbjct: 2209 YNIQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEG 2261
Query: 2291 RYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGL 2350
RYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL ERLIVNRPHPWGL
Sbjct: 2262 RYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANAEAIQEQITRVLLERLIVNRPHPWGL 2321
Query: 2351 LITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSM 2398
LITFIELIKNP + FW+ F+ CAPEIEKLF+SVA+ C G K M
Sbjct: 2322 LITFIELIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVM 2369
Score = 586 (211.3 bits), Expect = 0., Sum P(5) = 0.
Identities = 130/362 (35%), Positives = 207/362 (57%)
Query: 882 VSAASSSDMKPLLSSIGQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTST 941
++ A + P GQ S++ T++ ++ P + P + V +
Sbjct: 1009 LAQAQAQSQPPKAPQPGQASTLVTTATTTTTAAKTTTITRPTAVG-------PKKDVPPS 1061
Query: 942 KFGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQY 1001
+ NI+TL+ A ++ E +E P + VQ+KI+FI NN+S N+ K +E E +KE++
Sbjct: 1062 I--NTTNIDTLLVATDQTERIVEPPEN-VQEKIAFIFNNLSQSNMSQKVEELKETVKEEF 1118
Query: 1002 YPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSS 1061
PW +QY+VMKR SIEPNFH LY FLD + + + ++ TY N KVLL S+ ++
Sbjct: 1119 MPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANF 1178
Query: 1062 EERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPC 1119
+RSLLKNLG WLG +T+ +N+ + +++ KSL++EAY KG ++ V+PF +K+LE
Sbjct: 1179 SDRSLLKNLGHWLGMITLAKNKPILYTDLELKSLLLEAYVKGQQELLYVVPFVAKVLESS 1238
Query: 1120 QSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLL--K 1177
S+ ++P NPWTM I+ +LAE++ +LK+NLKF+IEVL KNL +D+ D+ P +LL K
Sbjct: 1239 LRSVIFRPQNPWTMGIMNVLAELHQEHDLKLNLKFEIEVLCKNLSMDITDLKPGNLLRDK 1298
Query: 1178 DRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHV-DLPLDVASPPNSGGPTHLLS 1236
D+ + +E K+ + +L+P V A P P + +G PT S
Sbjct: 1299 DKLKTLEEQLSAPKKETKPPE-ELLPIVTTADSVPFTAAPSTPATTTACTATGPPTPQFS 1357
Query: 1237 QY 1238
+
Sbjct: 1358 YH 1359
Score = 499 (180.7 bits), Expect = 0., Sum P(5) = 0.
Identities = 157/553 (28%), Positives = 268/553 (48%)
Query: 71 SVFKYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLDAL 130
S Y +D P + +S+K + L LS VL LS + + +GLALS+S N D
Sbjct: 89 STLCYAIDNPLH---YQKSLKPSP---HLFTQLSKVLKLSKVQEVILGLALSNSSNADLR 142
Query: 131 MCGKNFCMAQIERLCANPVPM----NSAEQIQNI-----------IMFLQR-SSDLSKH- 173
F ++ L + V N Q+I ++F Q+ SS + +
Sbjct: 143 GFAAQFVKQKLPDLLRSYVDADLGGNQEGGFQDIAIEVLHLLLSHLLFGQKGSSGVGQEQ 202
Query: 174 VDSLMQILSLLQSKDHTQFVLNPVL-PDELHDATSLRDLDLFHECRDDDFDDILAEMEKE 232
+D+ ++ L ++ VL P+L PD+ RD+ L D D L + E
Sbjct: 203 IDAFLKTLCRDFPQERCPVVLAPLLYPDK-------RDI-LMDRILPDSGD--LNKTMME 252
Query: 233 MSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLS---RILGAIARTHAGLEDNQNTF 289
S+ D M E+GYG A +C+ I+ + + E+T S R+LG +ARTH+GL D +
Sbjct: 253 SSLADFMQEVGYGFCASLEECRNIILQYG-VREVTASQVARVLGMMARTHSGLSDGIS-L 310
Query: 290 STFTLALGCSTM-SDLPPLS----SWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPT 344
T T +G + SD S +WNV+VL+ +K++ PN N+ V LD+ GF I
Sbjct: 311 QTITNPVGGGGIWSDGKDKSDSSQAWNVEVLIDVVKEVNPNLNFKEVTYELDHPGFLIRD 370
Query: 345 EEAFSFFM-SVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQL 403
+ + + + E FP+ + WK+ EGQLSF+++++ SP EVF FA
Sbjct: 371 SKGLQIVVYGIQRGLGMEVFPVDLIYRP-WKHAEGQLSFIQHSLLSP-EVFCFADYPCHT 428
Query: 404 PYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEMLLLGM 463
+D + + W SE+GH + + +P+K CP+ML+L +
Sbjct: 429 VAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGHYEQVKQLFSFPIKHCPDMLVLAL 488
Query: 464 AHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPNI---VLRGFVD---- 512
I+T+++ +++E+ + P+ + + ++ +ILH WH +P+I ++ +
Sbjct: 489 LQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHSMAEWYMR 548
Query: 513 AQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTY 572
+ + RIL++ Q+LK LS +L P F I LA +AS++E + L+KWL+ + +
Sbjct: 549 GEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKWLTDKIREH 608
Query: 573 KDVFFEECLKFVK 585
+ F + C+ F+K
Sbjct: 609 GEPFIQACVTFLK 621
Score = 402 (146.6 bits), Expect = 0., Sum P(5) = 0.
Identities = 74/157 (47%), Positives = 114/157 (72%)
Query: 662 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 717
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 829 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLF 888
Query: 718 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 777
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 889 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 948
Query: 778 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 814
AL++F +RL ++PQYC H+ I+H L +IE
Sbjct: 949 ALDRFKNRLKDYPQYCQHLASIAHFLQFPHHLQEYIE 985
Score = 329 (120.9 bits), Expect = 0., Sum P(5) = 0.
Identities = 76/238 (31%), Positives = 129/238 (54%)
Query: 1265 PSAQGLFQASQSQSP-FSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRA 1322
P+ A+ +P FS ++ + + H+ IN + L H ++ V A++RA
Sbjct: 1340 PATTTACTATGPPTPQFSYHDINVYALAGLAPHININVNIPLLQAHPQLKQCVRPAIERA 1399
Query: 1323 IKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEP 1382
++E+V +V RS+ IA T +++V KD+A++S+E+ + AAH M+ +L +A +TC+EP
Sbjct: 1400 VQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESHMRVAAHHMMRNLTAGMAMITCREP 1459
Query: 1383 LRGSISSQLRNSLQGLTIAS-----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTID 1437
L SI++ L+NS A E++E+A + DN +L C I++ A +KA +D
Sbjct: 1460 LLMSIATNLKNSFAAALRAPTPQQREMMEEAAARIAQDNCELACCFIQKTAVEKAGPEMD 1519
Query: 1438 GEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1495
+A + LR KH G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1520 KRLATEFELR-KHARQEGRRYCDPMVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1576
Score = 49 (22.3 bits), Expect = 6.3e-195, Sum P(3) = 6.3e-195
Identities = 27/94 (28%), Positives = 38/94 (40%)
Query: 1508 AMSAGSLTSSGDAAQASAYGLAGGQGNQGYSSSAGSTGFDAVSRP--SDVASGTTESTSA 1565
AM + SL S + S G QG+ + + + F + P S G +S
Sbjct: 716 AMGSLSLGVSSTSHTPSMQGFPSLQGSAFSNPQSPAKAFSNLPNPNPSTAFPGINPLSSQ 775
Query: 1566 --GFLSTSLVHIGAADGGILHNSESESVNAAFTP 1597
G LSTSL IG+ G +S+ S TP
Sbjct: 776 LQGPLSTSLSGIGSGLGMPTVSSDVFSARKMSTP 809
Score = 43 (20.2 bits), Expect = 1.1e-73, Sum P(5) = 1.1e-73
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 2322 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRY 2363
E +E ++E+ + + L++ R P+ L F++ +KNP +
Sbjct: 1108 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEF 1153
Score = 42 (19.8 bits), Expect = 3.0e-176, Sum P(3) = 3.0e-176
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 973 KISFIINNISALNVEAKAKEFTEIL 997
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 7.6e-231, Sum P(5) = 7.6e-231
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 1555 VASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEP 1614
V + TT +T+A T+ + A G S+N T T L A D TE + EP
Sbjct: 1031 VTTATTTTTAA---KTTTITRPTAVGP--KKDVPPSINT--TNIDTLLVATDQTERIVEP 1083
Query: 1615 GASSQ 1619
+ Q
Sbjct: 1084 PENVQ 1088
Score = 39 (18.8 bits), Expect = 7.7e-233, Sum P(4) = 7.7e-233
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 793 CNHILQISHLRSTHAELVAFIERALARISSGHLESDGAS 831
C +I+ +R A VA + +AR SG SDG S
Sbjct: 273 CRNIILQYGVREVTASQVARVLGMMARTHSGL--SDGIS 309
Score = 38 (18.4 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 19/70 (27%), Positives = 25/70 (35%)
Query: 2347 PWGLLITFIELIKNPRY---NFWNQSFIR--CAPEIEKLFESVARSC----GGLKPVDDS 2397
P+ +I L Y + W IR P I+ + R C GGL P D
Sbjct: 578 PFAFVIDLAALASRREYLKLDKWLTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPEKDQ 637
Query: 2398 MVSGWVPDNT 2407
S +P T
Sbjct: 638 PKSAQLPPET 647
Score = 37 (18.1 bits), Expect = 7.6e-231, Sum P(5) = 7.6e-231
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 1455 GSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSS 1503
G DP + QGS+ P G L+++Q + + P Q+S
Sbjct: 987 GQQSRDPPVKMQGSITTP-------GSLALAQAQAQSQPPKAPQPGQAS 1028
Score = 37 (18.1 bits), Expect = 1.0e-175, Sum P(3) = 1.0e-175
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 374 KNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDA 408
K E QLS + P E+ +A +P+ A
Sbjct: 1302 KTLEEQLSAPKKETKPPEELLPIVTTADSVPFTAA 1336
>UNIPROTKB|F1MHU9 [details] [associations]
symbol:CNOT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005778 "peroxisomal membrane" evidence=IEA]
GO:GO:0005778 GO:GO:0000932 OMA:YLKARAP InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 EMBL:DAAA02046541 IPI:IPI00708264
Ensembl:ENSBTAT00000027695 Uniprot:F1MHU9
Length = 2371
Score = 1474 (523.9 bits), Expect = 0., Sum P(5) = 0.
Identities = 334/770 (43%), Positives = 465/770 (60%)
Query: 1653 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1707
Q L A+ A + Q + S + ++L SRD AAL + QK +GL + S
Sbjct: 1616 QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL 1675
Query: 1708 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1761
L + HL +L A++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1676 LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1735
Query: 1762 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDE---SRVVISELHNLVDALAKLIEIVRN 1818
+Y++H+A+ ++ G N A FA+ L++ L+ DE + V ++L + ++ L ++ R
Sbjct: 1736 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG 1795
Query: 1819 PXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYN-IPESVD-PDPVGFPEQVSML 1876
+ +A + +H N ++ I ++ + DP G E+ L
Sbjct: 1796 NAPEGLPQLMEVVRSNYEAMIDR-----AHGGPNFMMHSGISQASEYDDPPGLREKAEYL 1850
Query: 1877 FAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTE--VSVAHCLSS 1931
EW Y + A + +V Q+HQ G+LK DD+ RFFR TE V +++ +
Sbjct: 1851 LREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQA 1910
Query: 1932 EVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIFLLSKILTVTVKF 1989
E NP + +D + +L+ ++K + +KI LL+K+L + V
Sbjct: 1911 EQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV 1968
Query: 1990 ILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPA 2049
+L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF N FH+L+P K P
Sbjct: 1969 LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG 2028
Query: 2050 FSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYK 2108
F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN EL P++ LYK
Sbjct: 2029 FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK 2088
Query: 2109 GTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKID 2168
GTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMRLPDP TPNLK+D
Sbjct: 2089 GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD 2148
Query: 2169 LLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAG 2228
+L EI PRI + + Q + D+D YLKT P +FLS+L+ L + + G
Sbjct: 2149 MLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSNLQV----SNEPG 2202
Query: 2229 TRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDT 2288
RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +DIFQ L DLDT
Sbjct: 2203 NRYNLQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDT 2255
Query: 2289 EGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPW 2348
EGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL ERLIVNRPHPW
Sbjct: 2256 EGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPW 2315
Query: 2349 GLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSM 2398
GLLITFIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K M
Sbjct: 2316 GLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVM 2365
Score = 620 (223.3 bits), Expect = 0., Sum P(5) = 0.
Identities = 134/346 (38%), Positives = 204/346 (58%)
Query: 898 GQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAE 957
GQ S++ T++ K V+ P +S PS T NI+TL+ A +
Sbjct: 1029 GQVSTMVTTSTTTTVAKTVT-VTRPTGVSFKKDVP-PSINTT--------NIDTLLVATD 1078
Query: 958 RRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIE 1017
+ E +E P + +Q+KI+FI NN+S N+ K +E E +KE++ PW +QY+VMKR SIE
Sbjct: 1079 QTERIVEPPEN-IQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIE 1137
Query: 1018 PNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKL 1077
PNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLLKNLG WLG +
Sbjct: 1138 PNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMI 1197
Query: 1078 TIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAYQPPNPWTMAI 1135
T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE S+ ++PPNPWTMAI
Sbjct: 1198 TLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAI 1257
Query: 1136 LGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR--EIEGNPDFSNKD 1193
+ +LAE++ +LK+NLKF+IEVL KNL +D+ ++ P +LLKD+ R ++ KD
Sbjct: 1258 MNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKD 1317
Query: 1194 VGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1239
V QP+ +P + S PP H ++ Y+
Sbjct: 1318 V--KQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYS 1361
Score = 447 (162.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 119/430 (27%), Positives = 209/430 (48%)
Query: 226 LAEMEKEMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLE 283
+A+ E S+ D M E+GYG A +C+ I+ F +T ++R+LG +ARTH+GL
Sbjct: 246 VAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMARTHSGLT 305
Query: 284 DNQNTFSTFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEG 339
D S G SD +WNV+VL+ +K+L P+ N+ V LD+ G
Sbjct: 306 DGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPG 365
Query: 340 FYIPTEEAF-SFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAH 398
F I + + + + E FP+ + WK+ EGQLSF+++++ +P E+F FA
Sbjct: 366 FQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRP-WKHAEGQLSFIQHSLINP-EIFCFAD 423
Query: 399 SARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEM 458
D + + W +E+G + + +P+K CP+M
Sbjct: 424 YPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDM 483
Query: 459 LLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPNI---VLRGFV 511
L+L + INT+++ +++E+ + P+ + + ++ +ILH WH +P+I ++
Sbjct: 484 LVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMA 543
Query: 512 D----AQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSI 567
+ + + RIL++ Q+LK LS +L P F I LA +AS++E + L+KWL+
Sbjct: 544 EWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTD 603
Query: 568 NLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGL 627
+ + + F + C+ F+K + + A L E + +L L+A G
Sbjct: 604 KIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSA--QLPPETLATMLACLQACAGS 661
Query: 628 ITSTKLSEEI 637
+ S +LSE I
Sbjct: 662 V-SQELSETI 670
Score = 406 (148.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 662 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 717
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 832 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLF 891
Query: 718 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 777
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 892 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 951
Query: 778 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 814
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 952 ALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 988
Score = 392 (143.0 bits), Expect = 1.1e-311, Sum P(5) = 1.1e-311
Identities = 136/522 (26%), Positives = 232/522 (44%)
Query: 10 SQIRFLLQSLNEANADSVFRELCQFIE-YGIEGSTMMLQTCMDHLNLHGTGLKNP----Q 64
SQI +L+ +L + N + +E+ + +G E +L+ H++ G G + Q
Sbjct: 11 SQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGDGKSSGKDFHQ 70
Query: 65 LESVVASVFKYIMDKPNFSTVFSQSV-------KITEINEQLLENLSDVLNLSLPERIGI 117
+ ++ I KPNF + S ++ K + L LS VL LS + +
Sbjct: 71 TQFLIQECASLIT-KPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLKLSKVQEVIF 129
Query: 118 GLALSDSENLDALMCGKNFCMAQIERLCANPVPMN-SAEQ---IQNIIMFLQRSSDLSKH 173
GLAL +S + D F ++ L + + + S Q Q+I + + LS
Sbjct: 130 GLALLNSSSTDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEVLHLL-LSHL 188
Query: 174 VDSLMQILSLLQSK-DHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDIL------ 226
+ + Q + D L P E L L L+ E RD D IL
Sbjct: 189 LFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVV-LAPL-LYPEKRDILMDRILPDSGGV 246
Query: 227 AEMEKEMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLED 284
A+ E S+ D M E+GYG A +C+ I+ F +T ++R+LG +ARTH+GL D
Sbjct: 247 AKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMARTHSGLTD 306
Query: 285 NQNTFSTFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGF 340
S G SD +WNV+VL+ +K+L P+ N+ V LD+ GF
Sbjct: 307 GIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPGF 366
Query: 341 YIPTEEAF-SFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHS 399
I + + + + E FP+ + WK+ EGQLSF+++++ +P E+F FA
Sbjct: 367 QIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRP-WKHAEGQLSFIQHSLINP-EIFCFADY 424
Query: 400 ARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEML 459
D + + W +E+G + + +P+K CP+ML
Sbjct: 425 PCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDML 484
Query: 460 LLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH 500
+L + INT+++ +++E+ + P+ + + ++ +ILH WH
Sbjct: 485 VLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWH 526
Score = 335 (123.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 75/225 (33%), Positives = 126/225 (56%)
Query: 1277 QSPFSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSV 1335
Q +S ++ + + H+ +N + H ++ V A++RA++E+V +V RS+
Sbjct: 1349 QPQYSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSI 1408
Query: 1336 SIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL 1395
IA T +++V KD+A++S+E+R+ AAH M+ +L +A +TC+EPL SIS+ L+NS
Sbjct: 1409 KIAMTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSF 1468
Query: 1396 -QGLTIAS----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKH 1450
L AS E+++QA + DN +L C I++ A +KA +D +A + LR KH
Sbjct: 1469 ASALRTASPQQREMMDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KH 1527
Query: 1451 REGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1495
G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1528 ARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1572
Score = 49 (22.3 bits), Expect = 7.6e-71, Sum P(4) = 7.6e-71
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2322 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2364
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 1111 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 1157
Score = 43 (20.2 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 1690 LAVAQKVFKGLYENASNNLHFSAH-LAILAAIRDVCKLVVKELTSWVIYSDE--ERKFNR 1746
++ +F G + N++ LH++ H +IR +L++ + W + ++ + K +R
Sbjct: 503 ISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIR---QLIMHAMAEWYMRGEQYDQAKLSR 559
Query: 1747 --DITMGL-IRSELLN 1759
D+ L S LLN
Sbjct: 560 ILDVAQDLKALSMLLN 575
Score = 42 (19.8 bits), Expect = 6.2e-226, Sum P(4) = 6.2e-226
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 1555 VASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEP 1614
V++ T ST+ T V + G S+N T T L A D TE + EP
Sbjct: 1031 VSTMVTTSTTTTVAKT--VTVTRPTGVSFKKDVPPSINT--TNIDTLLVATDQTERIVEP 1086
Query: 1615 GASSQ 1619
+ Q
Sbjct: 1087 PENIQ 1091
Score = 42 (19.8 bits), Expect = 3.3e-176, Sum P(3) = 3.3e-176
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 973 KISFIINNISALNVEAKAKEFTEIL 997
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 6.4e-188, Sum P(3) = 6.4e-188
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1597 PAATELYAADSTEPVK-EP--GASSQSLPSTAAPERIGSSILEPSL 1639
P+A+ L D+ PV+ +P G +S S+ +AAP P+L
Sbjct: 698 PSASSL---DAISPVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNL 740
Score = 41 (19.5 bits), Expect = 4.2e-176, Sum P(3) = 4.2e-176
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 72 VFKYIMDKPNFSTVFSQ---SVKITEINEQLL 100
V K + +PNF +++S ++K E N+ +L
Sbjct: 1130 VMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVL 1161
Score = 40 (19.1 bits), Expect = 1.0e-225, Sum P(4) = 1.0e-225
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1371 AGSLAHVTCKEPLRGSISSQLRNS 1394
A + A V K PL G +S+ + S
Sbjct: 1015 AQAQAQVPAKAPLAGQVSTMVTTS 1038
Score = 39 (18.8 bits), Expect = 1.3e-225, Sum P(4) = 1.3e-225
Identities = 19/87 (21%), Positives = 30/87 (34%)
Query: 915 LHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI 974
+ N + AM++ F SAL A+ ++RE +A A QD
Sbjct: 1440 MRNLTAGMAMITCREPLLMSISTNLKNSFASALR----TASPQQREMMDQAAAQLAQDNC 1495
Query: 975 SFIINNISALNVEAKAKEFTEILKEQY 1001
I VE E + L ++
Sbjct: 1496 ELACCFIQKTAVEKAGPEMDKRLATEF 1522
Score = 39 (18.8 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 19/70 (27%), Positives = 25/70 (35%)
Query: 2347 PWGLLITFIELIKNPRY---NFWNQSFIR--CAPEIEKLFESVARSC----GGLKPVDDS 2397
P+ +I L Y + W IR P I+ + R C GGL P D
Sbjct: 578 PFAFVIDLAALASRREYLKLDKWLTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQ 637
Query: 2398 MVSGWVPDNT 2407
S +P T
Sbjct: 638 PKSAQLPPET 647
>UNIPROTKB|A5YKK6 [details] [associations]
symbol:CNOT1 "CCR4-NOT transcription complex subunit 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS;IDA] [GO:0004535 "poly(A)-specific
ribonuclease activity" evidence=IDA] [GO:2000036 "regulation of
stem cell maintenance" evidence=IMP] [GO:0010606 "positive
regulation of cytoplasmic mRNA processing body assembly"
evidence=IDA] [GO:1900153 "positive regulation of
nuclear-transcribed mRNA catabolic process, deadenylation-dependent
decay" evidence=IMP] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0042974 "retinoic acid receptor binding" evidence=IDA]
[GO:0048387 "negative regulation of retinoic acid receptor
signaling pathway" evidence=IDA] [GO:0030331 "estrogen receptor
binding" evidence=IDA] [GO:0033147 "negative regulation of
intracellular estrogen receptor signaling pathway" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005778 "peroxisomal
membrane" evidence=IDA] [GO:0030014 "CCR4-NOT complex"
evidence=IDA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 GO:GO:0005829 GO:GO:0006355 GO:GO:0006351
GO:GO:0005778 GO:GO:0000932 GO:GO:0000289 EMBL:AL117492
EMBL:BX537840 EMBL:CR749237 EMBL:EF553522 EMBL:AC009118
EMBL:AC010287 EMBL:BC000779 EMBL:BC024317 EMBL:BC040523
EMBL:AB023224 EMBL:AF110778 IPI:IPI00166010 IPI:IPI00410157
IPI:IPI00642900 IPI:IPI00880052 PIR:T17270 RefSeq:NP_001252541.1
RefSeq:NP_057368.3 RefSeq:NP_996882.1 UniGene:Hs.460923
UniGene:Hs.731691 PDB:4GMJ PDB:4GML PDBsum:4GMJ PDBsum:4GML
ProteinModelPortal:A5YKK6 DIP:DIP-44954N IntAct:A5YKK6
MINT:MINT-2835018 STRING:A5YKK6 PhosphoSite:A5YKK6 PaxDb:A5YKK6
PeptideAtlas:A5YKK6 PRIDE:A5YKK6 Ensembl:ENST00000317147
Ensembl:ENST00000441024 Ensembl:ENST00000567188
Ensembl:ENST00000569240 GeneID:23019 KEGG:hsa:23019 UCSC:uc002enu.4
UCSC:uc002env.3 UCSC:uc002enx.3 CTD:23019 GeneCards:GC16M058553
H-InvDB:HIX0013093 HGNC:HGNC:7877 MIM:604917 neXtProt:NX_A5YKK6
PharmGKB:PA26672 eggNOG:COG5103 HOVERGEN:HBG060834
InParanoid:A5YKK6 KO:K12604 OMA:YLKARAP OrthoDB:EOG495ZQV
PhylomeDB:A5YKK6 ChiTaRS:CNOT1 GenomeRNAi:23019 NextBio:43960
ArrayExpress:A5YKK6 Bgee:A5YKK6 Genevestigator:A5YKK6
InterPro:IPR007196 InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
Uniprot:A5YKK6
Length = 2376
Score = 1474 (523.9 bits), Expect = 0., Sum P(5) = 0.
Identities = 334/770 (43%), Positives = 465/770 (60%)
Query: 1653 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1707
Q L A+ A + Q + S + ++L SRD AAL + QK +GL + S
Sbjct: 1621 QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL 1680
Query: 1708 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1761
L + HL +L A++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1681 LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1740
Query: 1762 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDE---SRVVISELHNLVDALAKLIEIVRN 1818
+Y++H+A+ ++ G N A FA+ L++ L+ DE + V ++L + ++ L ++ R
Sbjct: 1741 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG 1800
Query: 1819 PXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYN-IPESVD-PDPVGFPEQVSML 1876
+ +A + +H N ++ I ++ + DP G E+ L
Sbjct: 1801 NAPEGLPQLMEVVRSNYEAMIDR-----AHGGPNFMMHSGISQASEYDDPPGLREKAEYL 1855
Query: 1877 FAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTE--VSVAHCLSS 1931
EW Y + A + +V Q+HQ G+LK DD+ RFFR TE V +++ +
Sbjct: 1856 LREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQA 1915
Query: 1932 EVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIFLLSKILTVTVKF 1989
E NP + +D + +L+ ++K + +KI LL+K+L + V
Sbjct: 1916 EQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV 1973
Query: 1990 ILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPA 2049
+L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF N FH+L+P K P
Sbjct: 1974 LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG 2033
Query: 2050 FSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYK 2108
F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN EL P++ LYK
Sbjct: 2034 FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK 2093
Query: 2109 GTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKID 2168
GTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMRLPDP TPNLK+D
Sbjct: 2094 GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD 2153
Query: 2169 LLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAG 2228
+L EI PRI + + Q + D+D YLKT P +FLS+L+ L + + G
Sbjct: 2154 MLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSNLQV----SNEPG 2207
Query: 2229 TRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDT 2288
RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +DIFQ L DLDT
Sbjct: 2208 NRYNLQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDT 2260
Query: 2289 EGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPW 2348
EGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL ERLIVNRPHPW
Sbjct: 2261 EGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPW 2320
Query: 2349 GLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSM 2398
GLLITFIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K M
Sbjct: 2321 GLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVM 2370
Score = 621 (223.7 bits), Expect = 0., Sum P(5) = 0.
Identities = 134/346 (38%), Positives = 205/346 (59%)
Query: 898 GQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAE 957
GQ S++ T++ K V+ P +S PS T NI+TL+ A +
Sbjct: 1034 GQVSTMVTTSTTTTVAKTVT-VTRPTGVSFKKDVP-PSINTT--------NIDTLLVATD 1083
Query: 958 RRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIE 1017
+ E +E P + +Q+KI+FI NN+S N+ K +E E +KE++ PW +QY+VMKR SIE
Sbjct: 1084 QTERIVEPPEN-IQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIE 1142
Query: 1018 PNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKL 1077
PNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLLKNLG WLG +
Sbjct: 1143 PNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMI 1202
Query: 1078 TIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAYQPPNPWTMAI 1135
T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE S+ ++PPNPWTMAI
Sbjct: 1203 TLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAI 1262
Query: 1136 LGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR--EIEGNPDFSNKD 1193
+ +LAE++ +LK+NLKF+IEVL KNL +D+ ++ P +LLKD+ R ++ KD
Sbjct: 1263 MNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKD 1322
Query: 1194 VGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1239
V QP+ +P + S + PP H ++ Y+
Sbjct: 1323 V--KQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYS 1366
Score = 446 (162.1 bits), Expect = 0., Sum P(5) = 0.
Identities = 119/430 (27%), Positives = 209/430 (48%)
Query: 226 LAEMEKEMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLE 283
+A+ E S+ D M E+GYG A +C+ I+ F +T ++R+LG +ARTH+GL
Sbjct: 246 VAKTMMESSLADFMQEVGYGFCASIEECRNIIVQFGVREVTAAQVARVLGMMARTHSGLT 305
Query: 284 DNQNTFSTFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEG 339
D S G SD +WNV+VL+ +K+L P+ N+ V LD+ G
Sbjct: 306 DGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPG 365
Query: 340 FYIPTEEAF-SFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAH 398
F I + + + + E FP+ + WK+ EGQLSF+++++ +P E+F FA
Sbjct: 366 FQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRP-WKHAEGQLSFIQHSLINP-EIFCFAD 423
Query: 399 SARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEM 458
D + + W +E+G + + +P+K CP+M
Sbjct: 424 YPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDM 483
Query: 459 LLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPNI---VLRGFV 511
L+L + INT+++ +++E+ + P+ + + ++ +ILH WH +P+I ++
Sbjct: 484 LVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMA 543
Query: 512 D----AQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSI 567
+ + + RIL++ Q+LK LS +L P F I LA +AS++E + L+KWL+
Sbjct: 544 EWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTD 603
Query: 568 NLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGL 627
+ + + F + C+ F+K + + A L E + +L L+A G
Sbjct: 604 KIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSA--QLPPETLATMLACLQACAGS 661
Query: 628 ITSTKLSEEI 637
+ S +LSE I
Sbjct: 662 V-SQELSETI 670
Score = 406 (148.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 662 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 717
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 837 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLF 896
Query: 718 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 777
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 897 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 956
Query: 778 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 814
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 957 ALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 993
Score = 390 (142.3 bits), Expect = 1.6e-311, Sum P(5) = 1.6e-311
Identities = 135/522 (25%), Positives = 233/522 (44%)
Query: 10 SQIRFLLQSLNEANADSVFRELCQFIE-YGIEGSTMMLQTCMDHLNLHGTGLKNP----Q 64
SQI +L+ +L + N + +E+ + +G E +L+ H++ G G + Q
Sbjct: 11 SQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGDGKSSGKDFHQ 70
Query: 65 LESVVASVFKYIMDKPNFSTVFSQSV-------KITEINEQLLENLSDVLNLSLPERIGI 117
+ ++ ++ KPNF + S ++ K + L LS VL LS + +
Sbjct: 71 TQFLIQEC-ALLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLKLSKVQEVIF 129
Query: 118 GLALSDSENLDALMCGKNFCMAQIERLCANPVPMN-SAEQ---IQNIIMFLQRSSDLSKH 173
GLAL +S + D F ++ L + + + S Q Q+I + + LS
Sbjct: 130 GLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEVLHLL-LSHL 188
Query: 174 VDSLMQILSLLQSK-DHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDIL------ 226
+ + Q + D L P E L L L+ E RD D IL
Sbjct: 189 LFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVV-LAPL-LYPEKRDILMDRILPDSGGV 246
Query: 227 AEMEKEMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLED 284
A+ E S+ D M E+GYG A +C+ I+ F +T ++R+LG +ARTH+GL D
Sbjct: 247 AKTMMESSLADFMQEVGYGFCASIEECRNIIVQFGVREVTAAQVARVLGMMARTHSGLTD 306
Query: 285 NQNTFSTFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGF 340
S G SD +WNV+VL+ +K+L P+ N+ V LD+ GF
Sbjct: 307 GIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPGF 366
Query: 341 YIPTEEAF-SFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHS 399
I + + + + E FP+ + WK+ EGQLSF+++++ +P E+F FA
Sbjct: 367 QIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRP-WKHAEGQLSFIQHSLINP-EIFCFADY 424
Query: 400 ARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEML 459
D + + W +E+G + + +P+K CP+ML
Sbjct: 425 PCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDML 484
Query: 460 LLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH 500
+L + INT+++ +++E+ + P+ + + ++ +ILH WH
Sbjct: 485 VLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWH 526
Score = 335 (123.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 75/225 (33%), Positives = 126/225 (56%)
Query: 1277 QSPFSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSV 1335
Q +S ++ + + H+ +N + H ++ V A++RA++E+V +V RS+
Sbjct: 1354 QPQYSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSI 1413
Query: 1336 SIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL 1395
IA T +++V KD+A++S+E+R+ AAH M+ +L +A +TC+EPL SIS+ L+NS
Sbjct: 1414 KIAMTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSF 1473
Query: 1396 -QGLTIAS----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKH 1450
L AS E+++QA + DN +L C I++ A +KA +D +A + LR KH
Sbjct: 1474 ASALRTASPQQREMMDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KH 1532
Query: 1451 REGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1495
G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1533 ARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1577
Score = 49 (22.3 bits), Expect = 9.9e-71, Sum P(4) = 9.9e-71
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2322 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2364
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 1116 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 1162
Score = 43 (20.2 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 1690 LAVAQKVFKGLYENASNNLHFSAH-LAILAAIRDVCKLVVKELTSWVIYSDE--ERKFNR 1746
++ +F G + N++ LH++ H +IR +L++ + W + ++ + K +R
Sbjct: 503 ISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIR---QLIMHAMAEWYMRGEQYDQAKLSR 559
Query: 1747 --DITMGL-IRSELLN 1759
D+ L S LLN
Sbjct: 560 ILDVAQDLKALSMLLN 575
Score = 42 (19.8 bits), Expect = 8.3e-226, Sum P(4) = 8.3e-226
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 1555 VASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEP 1614
V++ T ST+ T V + G S+N T T L A D TE + EP
Sbjct: 1036 VSTMVTTSTTTTVAKT--VTVTRPTGVSFKKDVPPSINT--TNIDTLLVATDQTERIVEP 1091
Query: 1615 GASSQ 1619
+ Q
Sbjct: 1092 PENIQ 1096
Score = 42 (19.8 bits), Expect = 3.4e-176, Sum P(3) = 3.4e-176
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 973 KISFIINNISALNVEAKAKEFTEIL 997
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 8.5e-188, Sum P(3) = 8.5e-188
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1597 PAATELYAADSTEPVK-EP--GASSQSLPSTAAPERIGSSILEPSL 1639
P+A+ L D+ PV+ +P G +S S+ +AAP P+L
Sbjct: 698 PSASSL---DAISPVQIDPLAGMTSLSIGGSAAPHTQSMQGFPPNL 740
Score = 41 (19.5 bits), Expect = 4.4e-176, Sum P(3) = 4.4e-176
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 72 VFKYIMDKPNFSTVFSQ---SVKITEINEQLL 100
V K + +PNF +++S ++K E N+ +L
Sbjct: 1135 VMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVL 1166
Score = 40 (19.1 bits), Expect = 1.4e-225, Sum P(4) = 1.4e-225
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1371 AGSLAHVTCKEPLRGSISSQLRNS 1394
A + A V K PL G +S+ + S
Sbjct: 1020 AQAQAQVPAKAPLAGQVSTMVTTS 1043
Score = 39 (18.8 bits), Expect = 1.7e-225, Sum P(4) = 1.7e-225
Identities = 19/87 (21%), Positives = 30/87 (34%)
Query: 915 LHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI 974
+ N + AM++ F SAL A+ ++RE +A A QD
Sbjct: 1445 MRNLTAGMAMITCREPLLMSISTNLKNSFASALR----TASPQQREMMDQAAAQLAQDNC 1500
Query: 975 SFIINNISALNVEAKAKEFTEILKEQY 1001
I VE E + L ++
Sbjct: 1501 ELACCFIQKTAVEKAGPEMDKRLATEF 1527
Score = 39 (18.8 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 19/70 (27%), Positives = 25/70 (35%)
Query: 2347 PWGLLITFIELIKNPRY---NFWNQSFIR--CAPEIEKLFESVARSC----GGLKPVDDS 2397
P+ +I L Y + W IR P I+ + R C GGL P D
Sbjct: 578 PFAFVIDLAALASRREYLKLDKWLTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQ 637
Query: 2398 MVSGWVPDNT 2407
S +P T
Sbjct: 638 PKSAQLPPET 647
>MGI|MGI:2442402 [details] [associations]
symbol:Cnot1 "CCR4-NOT transcription complex, subunit 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010606 "positive regulation of cytoplasmic mRNA
processing body assembly" evidence=ISO] [GO:0030014 "CCR4-NOT
complex" evidence=ISO] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033147 "negative regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0042974
"retinoic acid receptor binding" evidence=ISO] [GO:0048387
"negative regulation of retinoic acid receptor signaling pathway"
evidence=ISO] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISO]
[GO:1900153 "positive regulation of nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=ISO]
[GO:2000036 "regulation of stem cell maintenance" evidence=ISO]
MGI:MGI:2442402 GO:GO:0006355 GO:GO:0006351 GO:GO:0005778
GO:GO:0000932 CTD:23019 eggNOG:COG5103 HOVERGEN:HBG060834 KO:K12604
OMA:YLKARAP OrthoDB:EOG495ZQV ChiTaRS:CNOT1 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 EMBL:AC113951
EMBL:AC127300 EMBL:AK031357 EMBL:AK034776 EMBL:AK048177
EMBL:AK143651 EMBL:BC018281 EMBL:BC158073 EMBL:AK129258
IPI:IPI00672703 IPI:IPI00673465 IPI:IPI00880243 IPI:IPI00881912
RefSeq:NP_835179.1 UniGene:Mm.259220 ProteinModelPortal:Q6ZQ08
DIP:DIP-46845N IntAct:Q6ZQ08 STRING:Q6ZQ08 PhosphoSite:Q6ZQ08
PaxDb:Q6ZQ08 PRIDE:Q6ZQ08 Ensembl:ENSMUST00000098473 GeneID:234594
KEGG:mmu:234594 UCSC:uc009myy.1 UCSC:uc009myz.2 UCSC:uc009mzb.2
GeneTree:ENSGT00390000014869 NextBio:382234 Bgee:Q6ZQ08
CleanEx:MM_CNOT1 Genevestigator:Q6ZQ08 Uniprot:Q6ZQ08
Length = 2375
Score = 1474 (523.9 bits), Expect = 0., Sum P(5) = 0.
Identities = 336/770 (43%), Positives = 465/770 (60%)
Query: 1653 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1707
Q L A+ A + Q + S + ++L SRD AAL + QK +GL + S
Sbjct: 1620 QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL 1679
Query: 1708 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1761
L + HL +L A++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1680 LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1739
Query: 1762 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVV-ISE--LHNLVDALAKLIEIVRN 1818
+Y++H+A+ ++ G N A FA+ L++ L+ DE V I+E L + ++ L ++ R
Sbjct: 1740 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG 1799
Query: 1819 PXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYN-IPESVD-PDPVGFPEQVSML 1876
+ +A + +H N ++ I ++ + DP G E+ L
Sbjct: 1800 NAPEGLPQLMEVVRSNYEAMIDR-----AHGGPNFMMHSGISQASEYDDPPGLREKAEYL 1854
Query: 1877 FAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTE--VSVAHCLSS 1931
EW Y + A + +V Q+HQ G+LK DD+ RFFR TE V +++ +
Sbjct: 1855 LREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQA 1914
Query: 1932 EVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIFLLSKILTVTVKF 1989
E NP + +D + +L+ ++K + +KI LL+K+L + V
Sbjct: 1915 EQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV 1972
Query: 1990 ILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPA 2049
+L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF N FH+L+P K P
Sbjct: 1973 LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG 2032
Query: 2050 FSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYK 2108
F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN EL P++ LYK
Sbjct: 2033 FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK 2092
Query: 2109 GTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKID 2168
GTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMRLPDP TPNLK+D
Sbjct: 2093 GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD 2152
Query: 2169 LLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAG 2228
+L EI PRI + + Q + D+D YLKT P +FLS+L+ L + + G
Sbjct: 2153 MLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSNLQV----SNEPG 2206
Query: 2229 TRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDT 2288
RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +DIFQ L DLDT
Sbjct: 2207 NRYNLQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDT 2259
Query: 2289 EGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPW 2348
EGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL ERLIVNRPHPW
Sbjct: 2260 EGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPW 2319
Query: 2349 GLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSM 2398
GLLITFIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K M
Sbjct: 2320 GLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVM 2369
Score = 622 (224.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 124/296 (41%), Positives = 187/296 (63%)
Query: 948 NIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQ 1007
NI+TL+ A ++ E +E P + +Q+KI+FI NN+S N+ K +E E +KE++ PW +Q
Sbjct: 1073 NIDTLLVATDQTERIVEPPEN-IQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQ 1131
Query: 1008 YMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLL 1067
Y+VMKR SIEPNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLL
Sbjct: 1132 YLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLL 1191
Query: 1068 KNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAY 1125
KNLG WLG +T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE SL +
Sbjct: 1192 KNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSLVF 1251
Query: 1126 QPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR--EI 1183
+PPNPWTMAI+ +LAE++ +LK+NLKF+IEVL KNL +D+ ++ P +LLKD+ R +
Sbjct: 1252 RPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNL 1311
Query: 1184 EGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1239
+ KDV QP+ +P + S PP H ++ Y+
Sbjct: 1312 DEQLSAPKKDV--KQPEELPAITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYS 1365
Score = 447 (162.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 146/584 (25%), Positives = 268/584 (45%)
Query: 74 KYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLDALMCG 133
K + P+ S+ +K++++ E + L+ +LN S P+ G + D L
Sbjct: 103 KSLKPAPHLFAQLSKVLKLSKVQEVIF-GLA-LLNSSSPDLRGFAAQFIKQKLPDLLRSY 160
Query: 134 KNFCMAQIERLCANPVPMNSAEQIQNIIMFLQRSSDL--SKHVDSLMQILSLLQSKDHTQ 191
+ ++ + + + + + ++F Q+ + + +D+ ++ L ++
Sbjct: 161 IDADVSGNQEGGFQDIAIEVLHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCP 220
Query: 192 FVLNPVLPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEMSMGDVMNELGYGCSADAS 251
VL P+L E D L D L D + M E S+ D M E+GYG A
Sbjct: 221 VVLAPLLYPEKRDI--LMDRIL------PDSGGVAKTM-MESSLADFMQEVGYGFCASIE 271
Query: 252 QCKEILSLF--TPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGC----STMSDLP 305
+C+ I+ F +T ++R+LG +ARTH+GL D S G S+
Sbjct: 272 ECRNIIMQFGVREVTAAQVARVLGMMARTHSGLTDGIPLQSISAPGSGIWSDGKDKSEGA 331
Query: 306 PLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAF-SFFMSVYKYACQEPFP 364
+WNV+VL+ +K+L P+ N+ V LD+ GF I + + + + E FP
Sbjct: 332 QAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPGFQIRDSKGLHNVVYGIQRGLGMEVFP 391
Query: 365 LHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWX 424
+ + WK+ EGQLSF+++++ +P EVF FA D + + W
Sbjct: 392 VDFIYRP-WKHAEGQLSFIQHSLINP-EVFCFADYPCHTVATDILKAPPEDDNREIATWK 449
Query: 425 XXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPM 484
+E+G + + +P+K CP+ML+L + INT+++ +++E+ + P+
Sbjct: 450 SLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDMLVLALLQINTSWHTLRHELISTLMPI 509
Query: 485 IIKSTMSNGMILHI-WH---VNPNI---VLRGFVD----AQNMEPDCTIRILEICQELKI 533
+ + ++ +ILH WH +P+I ++ + + + RIL++ Q+LK
Sbjct: 510 FLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMAEWYMRGEQYDQAKLSRILDVAQDLKA 569
Query: 534 LSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQ 593
LS +L P F I LA +AS++E + L+KWL+ + + + F + C+ F+K
Sbjct: 570 LSMLLNGTPFAFVIDLAALASRREYLKLDKWLTDKIREHGEPFIQACMTFLKRRCPSILG 629
Query: 594 DFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGLITSTKLSEEI 637
+ + A L E + +L L+A G + S +LSE I
Sbjct: 630 GLAPEKDQPKSA--QLPAETLATMLACLQACAGSV-SQELSETI 670
Score = 406 (148.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 662 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 717
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 836 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLF 895
Query: 718 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 777
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 896 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 955
Query: 778 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 814
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 956 ALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 992
Score = 335 (123.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 75/225 (33%), Positives = 126/225 (56%)
Query: 1277 QSPFSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSV 1335
Q +S ++ + + H+ +N + H ++ V A++RA++E+V +V RS+
Sbjct: 1353 QPQYSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSI 1412
Query: 1336 SIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL 1395
IA T +++V KD+A++S+E+R+ AAH M+ +L +A +TC+EPL SIS+ L+NS
Sbjct: 1413 KIAMTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSF 1472
Query: 1396 -QGLTIAS----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKH 1450
L AS E+++QA + DN +L C I++ A +KA +D +A + LR KH
Sbjct: 1473 ASALRTASPQQREMMDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KH 1531
Query: 1451 REGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1495
G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1532 ARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1576
Score = 49 (22.3 bits), Expect = 6.9e-69, Sum P(5) = 6.9e-69
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2322 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2364
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 1115 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 1161
Score = 42 (19.8 bits), Expect = 3.4e-176, Sum P(3) = 3.4e-176
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 973 KISFIINNISALNVEAKAKEFTEIL 997
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 6.6e-188, Sum P(3) = 6.6e-188
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1597 PAATELYAADSTEPVK-EP--GASSQSLPSTAAPERIGSSILEPSL 1639
P+A+ L D+ PV+ +P G +S S+ +AAP P+L
Sbjct: 698 PSASSL---DAISPVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNL 740
Score = 41 (19.5 bits), Expect = 4.3e-176, Sum P(3) = 4.3e-176
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 72 VFKYIMDKPNFSTVFSQ---SVKITEINEQLL 100
V K + +PNF +++S ++K E N+ +L
Sbjct: 1134 VMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVL 1165
Score = 39 (18.8 bits), Expect = 1.3e-225, Sum P(4) = 1.3e-225
Identities = 19/87 (21%), Positives = 30/87 (34%)
Query: 915 LHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI 974
+ N + AM++ F SAL A+ ++RE +A A QD
Sbjct: 1444 MRNLTAGMAMITCREPLLMSISTNLKNSFASALR----TASPQQREMMDQAAAQLAQDNC 1499
Query: 975 SFIINNISALNVEAKAKEFTEILKEQY 1001
I VE E + L ++
Sbjct: 1500 ELACCFIQKTAVEKAGPEMDKRLATEF 1526
Score = 39 (18.8 bits), Expect = 7.4e-225, Sum P(5) = 7.4e-225
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 1590 SVNAAFTPAATELYAADSTEPVKEPGASSQ 1619
S+N T T L A D TE + EP + Q
Sbjct: 1068 SINT--TNIDTLLVATDQTERIVEPPENIQ 1095
Score = 37 (18.1 bits), Expect = 7.4e-225, Sum P(5) = 7.4e-225
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1371 AGSLAHVTCKEPLRGSISSQLRNS 1394
A + A V K PL G +++ + S
Sbjct: 1019 AQAQAQVPAKAPLAGQVNTMVTTS 1042
>UNIPROTKB|F1RFU3 [details] [associations]
symbol:CNOT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005778 "peroxisomal membrane" evidence=IEA]
GO:GO:0005778 GO:GO:0000932 CTD:23019 KO:K12604 OMA:YLKARAP
InterPro:IPR007196 InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 EMBL:FP236140 RefSeq:XP_003127000.1
Ensembl:ENSSSCT00000003099 GeneID:100511993 KEGG:ssc:100511993
Uniprot:F1RFU3
Length = 2375
Score = 1471 (522.9 bits), Expect = 0., Sum P(5) = 0.
Identities = 332/765 (43%), Positives = 454/765 (59%)
Query: 1653 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1707
Q L A+ A + Q + S + ++L SRD AAL + QK +GL + S
Sbjct: 1620 QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL 1679
Query: 1708 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1761
L + HL +L A++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1680 LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1739
Query: 1762 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLIEIVRNPXX 1821
+Y++H+A+ ++ G N A FA+ L++ L+ DE V +L + L+ I +
Sbjct: 1740 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHFTEADLFHTIETLMRINAHSRG 1799
Query: 1822 XXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYNIPESVDPDPVGFPEQVSMLFAEW- 1880
++ +A+ S DP G E+ L EW
Sbjct: 1800 NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV 1859
Query: 1881 --YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTE--VSVAHCLSSEVI-N 1935
Y + A + +V Q+HQ G+LK DD+ RFFR TE V +++ +E N
Sbjct: 1860 NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN 1919
Query: 1936 PGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIFLLSKILTVTVKFILKDA 1994
P + +D + +L+ ++K + +KI LL+K+L + V +L+D
Sbjct: 1920 PAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDH 1977
Query: 1995 EEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAW 2054
+ +++ F PY R+FI LL++++ + V + NFQ L+AF N FH+L+P K P F +AW
Sbjct: 1978 DVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAW 2037
Query: 2055 LELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRV 2113
LEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN EL P++ LYKGTLRV
Sbjct: 2038 LELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRV 2097
Query: 2114 LLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEI 2173
LLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMRLPDP TPNLK+D+L EI
Sbjct: 2098 LLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEI 2157
Query: 2174 RDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNV 2233
PRI + + Q + D+D YLKT P +FLS+L+ L + + G RYN+
Sbjct: 2158 NIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSNLQV----SNEPGNRYNL 2211
Query: 2234 PLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYL 2293
LIN+LVLYVG QAI +H + G+ S++ SA +DIFQ L DLDTEGRYL
Sbjct: 2212 QLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYL 2264
Query: 2294 FLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLIT 2353
FLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL ERLIVNRPHPWGLLIT
Sbjct: 2265 FLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLIT 2324
Query: 2354 FIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSM 2398
FIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K M
Sbjct: 2325 FIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVM 2369
Score = 620 (223.3 bits), Expect = 0., Sum P(5) = 0.
Identities = 134/346 (38%), Positives = 204/346 (58%)
Query: 898 GQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAE 957
GQ S++ T++ K V+ P +S PS T NI+TL+ A +
Sbjct: 1034 GQVSTMVTTSTTTTVAKTVT-VTRPTGVSFKKDVP-PSINTT--------NIDTLLVATD 1083
Query: 958 RRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIE 1017
+ E +E P + +Q+KI+FI NN+S N+ K +E E +KE++ PW +QY+VMKR SIE
Sbjct: 1084 QTERIVEPPEN-IQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIE 1142
Query: 1018 PNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKL 1077
PNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLLKNLG WLG +
Sbjct: 1143 PNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMI 1202
Query: 1078 TIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAYQPPNPWTMAI 1135
T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE S+ ++PPNPWTMAI
Sbjct: 1203 TLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAI 1262
Query: 1136 LGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR--EIEGNPDFSNKD 1193
+ +LAE++ +LK+NLKF+IEVL KNL +D+ ++ P +LLKD+ R ++ KD
Sbjct: 1263 MNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKD 1322
Query: 1194 VGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1239
V QP+ +P + S PP H ++ Y+
Sbjct: 1323 V--KQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYS 1366
Score = 447 (162.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 119/430 (27%), Positives = 209/430 (48%)
Query: 226 LAEMEKEMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLE 283
+A+ E S+ D M E+GYG A +C+ I+ F +T ++R+LG +ARTH+GL
Sbjct: 246 VAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMARTHSGLT 305
Query: 284 DNQNTFSTFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEG 339
D S G SD +WNV+VL+ +K+L P+ N+ V LD+ G
Sbjct: 306 DGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPG 365
Query: 340 FYIPTEEAF-SFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAH 398
F I + + + + E FP+ + WK+ EGQLSF+++++ +P E+F FA
Sbjct: 366 FQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRP-WKHAEGQLSFIQHSLINP-EIFCFAD 423
Query: 399 SARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEM 458
D + + W +E+G + + +P+K CP+M
Sbjct: 424 YPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDM 483
Query: 459 LLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPNI---VLRGFV 511
L+L + INT+++ +++E+ + P+ + + ++ +ILH WH +P+I ++
Sbjct: 484 LVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMA 543
Query: 512 D----AQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSI 567
+ + + RIL++ Q+LK LS +L P F I LA +AS++E + L+KWL+
Sbjct: 544 EWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTD 603
Query: 568 NLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGL 627
+ + + F + C+ F+K + + A L E + +L L+A G
Sbjct: 604 KIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSA--QLPPETLATMLACLQACAGS 661
Query: 628 ITSTKLSEEI 637
+ S +LSE I
Sbjct: 662 V-SQELSETI 670
Score = 406 (148.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 662 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 717
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 837 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLF 896
Query: 718 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 777
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 897 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 956
Query: 778 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 814
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 957 ALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 993
Score = 391 (142.7 bits), Expect = 4.5e-311, Sum P(5) = 4.5e-311
Identities = 136/522 (26%), Positives = 232/522 (44%)
Query: 10 SQIRFLLQSLNEANADSVFRELCQFIE-YGIEGSTMMLQTCMDHLNLHGTGLKNP----Q 64
SQI +L+ +L + N + +E+ + +G E +L+ H++ G G + Q
Sbjct: 11 SQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGDGKSSGKDFHQ 70
Query: 65 LESVVASVFKYIMDKPNFSTVFSQSV-------KITEINEQLLENLSDVLNLSLPERIGI 117
+ ++ I KPNF + S ++ K + L LS VL LS + +
Sbjct: 71 TQFLIQECASLIT-KPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLKLSKVQEVIF 129
Query: 118 GLALSDSENLDALMCGKNFCMAQIERLCANPVPMN-SAEQ---IQNIIMFLQRSSDLSKH 173
GLAL +S + D F ++ L + + + S Q Q+I + + LS
Sbjct: 130 GLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEVLHLL-LSHL 188
Query: 174 VDSLMQILSLLQSK-DHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDIL------ 226
+ + Q + D L P E L L L+ E RD D IL
Sbjct: 189 LFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVV-LAPL-LYPEKRDILMDRILPDSGGV 246
Query: 227 AEMEKEMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLED 284
A+ E S+ D M E+GYG A +C+ I+ F +T ++R+LG +ARTH+GL D
Sbjct: 247 AKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMARTHSGLTD 306
Query: 285 NQNTFSTFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGF 340
S G SD +WNV+VL+ +K+L P+ N+ V LD+ GF
Sbjct: 307 GIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPGF 366
Query: 341 YIPTEEAF-SFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHS 399
I + + + + E FP+ + WK+ EGQLSF+++++ +P E+F FA
Sbjct: 367 QIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRP-WKHAEGQLSFIQHSLINP-EIFCFADY 424
Query: 400 ARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEML 459
D + + W +E+G + + +P+K CP+ML
Sbjct: 425 PCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDML 484
Query: 460 LLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH 500
+L + INT+++ +++E+ + P+ + + ++ +ILH WH
Sbjct: 485 VLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWH 526
Score = 334 (122.6 bits), Expect = 0., Sum P(5) = 0.
Identities = 73/209 (34%), Positives = 120/209 (57%)
Query: 1292 IGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYA 1351
+ H+ +N + H ++ V A++RA++E+V +V RS+ IA T +++V KD+A
Sbjct: 1370 LAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFA 1429
Query: 1352 MESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL-QGLTIAS----ELLE 1406
++S+E+R+ AAH M+ +L +A +TC+EPL SIS+ L+NS L AS E+++
Sbjct: 1430 LDSEESRMRMAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMD 1489
Query: 1407 QAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSSFFDPNIYAQ 1466
QA + DN +L C I++ A +KA +D +A + LR KH G + DP +
Sbjct: 1490 QAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KHARQEGRRYCDPVVLTY 1548
Query: 1467 GSMGVPEALRPKPGHLSVSQQRVYEDFVR 1495
+ +PE +R K G + Q VYE+F R
Sbjct: 1549 QAERMPEQIRLKVGGVDPKQLAVYEEFAR 1577
Score = 49 (22.3 bits), Expect = 7.7e-71, Sum P(4) = 7.7e-71
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2322 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2364
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 1116 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 1162
Score = 43 (20.2 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 1690 LAVAQKVFKGLYENASNNLHFSAH-LAILAAIRDVCKLVVKELTSWVIYSDE--ERKFNR 1746
++ +F G + N++ LH++ H +IR +L++ + W + ++ + K +R
Sbjct: 503 ISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIR---QLIMHAMAEWYMRGEQYDQAKLSR 559
Query: 1747 --DITMGL-IRSELLN 1759
D+ L S LLN
Sbjct: 560 ILDVAQDLKALSMLLN 575
Score = 42 (19.8 bits), Expect = 1.5e-225, Sum P(4) = 1.5e-225
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 1555 VASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEP 1614
V++ T ST+ T V + G S+N T T L A D TE + EP
Sbjct: 1036 VSTMVTTSTTTTVAKT--VTVTRPTGVSFKKDVPPSINT--TNIDTLLVATDQTERIVEP 1091
Query: 1615 GASSQ 1619
+ Q
Sbjct: 1092 PENIQ 1096
Score = 42 (19.8 bits), Expect = 9.6e-176, Sum P(3) = 9.6e-176
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 973 KISFIINNISALNVEAKAKEFTEIL 997
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 1.5e-187, Sum P(3) = 1.5e-187
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1597 PAATELYAADSTEPVK-EP--GASSQSLPSTAAPERIGSSILEPSL 1639
P+A+ L D+ PV+ +P G +S S+ +AAP P+L
Sbjct: 698 PSASSL---DAISPVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNL 740
Score = 41 (19.5 bits), Expect = 1.2e-175, Sum P(3) = 1.2e-175
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 72 VFKYIMDKPNFSTVFSQ---SVKITEINEQLL 100
V K + +PNF +++S ++K E N+ +L
Sbjct: 1135 VMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVL 1166
Score = 40 (19.1 bits), Expect = 2.4e-225, Sum P(4) = 2.4e-225
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1371 AGSLAHVTCKEPLRGSISSQLRNS 1394
A + A V K PL G +S+ + S
Sbjct: 1020 AQAQAQVPAKAPLAGQVSTMVTTS 1043
Score = 40 (19.1 bits), Expect = 6.6e-131, Sum P(4) = 6.6e-131
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 1710 FSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSEL-LNLAEYNVHMA 1768
F AH + +R + V+EL V+ D K ++R + L+ E + MA
Sbjct: 1383 FQAHPQLKQCVRQAIERAVQELVHPVV--DRSIKIAMTTCEQIVRKDFALDSEESRMRMA 1440
Score = 39 (18.8 bits), Expect = 3.0e-225, Sum P(4) = 3.0e-225
Identities = 19/87 (21%), Positives = 30/87 (34%)
Query: 915 LHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI 974
+ N + AM++ F SAL A+ ++RE +A A QD
Sbjct: 1445 MRNLTAGMAMITCREPLLMSISTNLKNSFASALR----TASPQQREMMDQAAAQLAQDNC 1500
Query: 975 SFIINNISALNVEAKAKEFTEILKEQY 1001
I VE E + L ++
Sbjct: 1501 ELACCFIQKTAVEKAGPEMDKRLATEF 1527
Score = 39 (18.8 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 19/70 (27%), Positives = 25/70 (35%)
Query: 2347 PWGLLITFIELIKNPRY---NFWNQSFIR--CAPEIEKLFESVARSC----GGLKPVDDS 2397
P+ +I L Y + W IR P I+ + R C GGL P D
Sbjct: 578 PFAFVIDLAALASRREYLKLDKWLTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQ 637
Query: 2398 MVSGWVPDNT 2407
S +P T
Sbjct: 638 PKSAQLPPET 647
>UNIPROTKB|G3V7M0 [details] [associations]
symbol:Cnot1 "RCG39079" species:10116 "Rattus norvegicus"
[GO:0005778 "peroxisomal membrane" evidence=IEA] RGD:1308009
CTD:23019 KO:K12604 InterPro:IPR007196 InterPro:IPR024557
Pfam:PF12842 Pfam:PF04054 GeneTree:ENSGT00390000014869
EMBL:CH474006 RefSeq:NP_001128312.1 UniGene:Rn.56498 PRIDE:G3V7M0
Ensembl:ENSRNOT00000016563 GeneID:291841 KEGG:rno:291841
NextBio:633244 Uniprot:G3V7M0
Length = 2376
Score = 1470 (522.5 bits), Expect = 0., Sum P(5) = 0.
Identities = 335/770 (43%), Positives = 464/770 (60%)
Query: 1653 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1707
Q L A+ A + Q + S + ++L SRD AAL + QK +GL + S
Sbjct: 1621 QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL 1680
Query: 1708 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1761
L + HL +L ++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1681 LLRYRECHLLVLKGLQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1740
Query: 1762 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVV-ISE--LHNLVDALAKLIEIVRN 1818
+Y++H+A+ ++ G N A FA+ L++ L+ DE V I+E L + ++ L ++ R
Sbjct: 1741 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG 1800
Query: 1819 PXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYN-IPESVD-PDPVGFPEQVSML 1876
+ +A + +H N ++ I ++ + DP G E+ L
Sbjct: 1801 NAPEGLPQLMEVVRSNYEAMIDR-----AHGGPNFMMHSGISQASEYDDPPGLREKAEYL 1855
Query: 1877 FAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTE--VSVAHCLSS 1931
EW Y + A + +V Q+HQ G+LK DD+ RFFR TE V +++ +
Sbjct: 1856 LREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQA 1915
Query: 1932 EVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIFLLSKILTVTVKF 1989
E NP + +D + +L+ ++K + +KI LL+K+L + V
Sbjct: 1916 EQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV 1973
Query: 1990 ILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPA 2049
+L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF N FH+L+P K P
Sbjct: 1974 LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG 2033
Query: 2050 FSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYK 2108
F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN EL P++ LYK
Sbjct: 2034 FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK 2093
Query: 2109 GTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKID 2168
GTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMRLPDP TPNLK+D
Sbjct: 2094 GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD 2153
Query: 2169 LLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAG 2228
+L EI PRI + + Q + D+D YLKT P +FLS+L+ L + + G
Sbjct: 2154 MLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSNLQV----SNEPG 2207
Query: 2229 TRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDT 2288
RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +DIFQ L DLDT
Sbjct: 2208 NRYNLQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDT 2260
Query: 2289 EGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPW 2348
EGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL ERLIVNRPHPW
Sbjct: 2261 EGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPW 2320
Query: 2349 GLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSM 2398
GLLITFIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K M
Sbjct: 2321 GLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVM 2370
Score = 622 (224.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 124/296 (41%), Positives = 187/296 (63%)
Query: 948 NIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQ 1007
NI+TL+ A ++ E +E P + +Q+KI+FI NN+S N+ K +E E +KE++ PW +Q
Sbjct: 1074 NIDTLLVATDQTERIVEPPEN-IQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQ 1132
Query: 1008 YMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLL 1067
Y+VMKR SIEPNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLL
Sbjct: 1133 YLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLL 1192
Query: 1068 KNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAY 1125
KNLG WLG +T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE SL +
Sbjct: 1193 KNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSLVF 1252
Query: 1126 QPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR--EI 1183
+PPNPWTMAI+ +LAE++ +LK+NLKF+IEVL KNL +D+ ++ P +LLKD+ R +
Sbjct: 1253 RPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNL 1312
Query: 1184 EGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1239
+ KDV QP+ +P + S PP H ++ Y+
Sbjct: 1313 DEQLSAPKKDV--KQPEELPAITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYS 1366
Score = 447 (162.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 146/584 (25%), Positives = 268/584 (45%)
Query: 74 KYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLDALMCG 133
K + P+ S+ +K++++ E + L+ +LN S P+ G + D L
Sbjct: 103 KSLKPAPHLFAQLSKVLKLSKVQEVIF-GLA-LLNSSSPDLRGFAAQFIKQKLPDLLRSY 160
Query: 134 KNFCMAQIERLCANPVPMNSAEQIQNIIMFLQRSSDL--SKHVDSLMQILSLLQSKDHTQ 191
+ ++ + + + + + ++F Q+ + + +D+ ++ L ++
Sbjct: 161 IDADVSGNQEGGFQDIAIEVLHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCP 220
Query: 192 FVLNPVLPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEMSMGDVMNELGYGCSADAS 251
VL P+L E D L D L D + M E S+ D M E+GYG A
Sbjct: 221 VVLAPLLYPEKRDI--LMDRIL------PDSGGVAKTM-MESSLADFMQEVGYGFCASIE 271
Query: 252 QCKEILSLF--TPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGC----STMSDLP 305
+C+ I+ F +T ++R+LG +ARTH+GL D S G S+
Sbjct: 272 ECRNIIMQFGVREVTAAQVARVLGMMARTHSGLTDGIPLQSISAPGSGIWSDGKDKSEGA 331
Query: 306 PLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAF-SFFMSVYKYACQEPFP 364
+WNV+VL+ +K+L P+ N+ V LD+ GF I + + + + E FP
Sbjct: 332 QAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPGFQIRDSKGLHNVVYGIQRGLGMEVFP 391
Query: 365 LHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWX 424
+ + WK+ EGQLSF+++++ +P EVF FA D + + W
Sbjct: 392 VDFIYRP-WKHAEGQLSFIQHSLINP-EVFCFADYPCHTVATDILKAPPEDDNREIATWK 449
Query: 425 XXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPM 484
+E+G + + +P+K CP+ML+L + INT+++ +++E+ + P+
Sbjct: 450 SLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDMLVLALLQINTSWHTLRHELISTLMPI 509
Query: 485 IIKSTMSNGMILHI-WH---VNPNI---VLRGFVD----AQNMEPDCTIRILEICQELKI 533
+ + ++ +ILH WH +P+I ++ + + + RIL++ Q+LK
Sbjct: 510 FLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMAEWYMRGEQYDQAKLSRILDVAQDLKA 569
Query: 534 LSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQ 593
LS +L P F I LA +AS++E + L+KWL+ + + + F + C+ F+K
Sbjct: 570 LSMLLNGTPFAFVIDLAALASRREYLKLDKWLTDKIREHGEPFIQACMTFLKRRCPSILG 629
Query: 594 DFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGLITSTKLSEEI 637
+ + A L E + +L L+A G + S +LSE I
Sbjct: 630 GLAPEKDQPKSA--QLPAETLATMLACLQACAGSV-SQELSETI 670
Score = 406 (148.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 662 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 717
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 837 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLF 896
Query: 718 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 777
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 897 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 956
Query: 778 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 814
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 957 ALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 993
Score = 335 (123.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 75/225 (33%), Positives = 126/225 (56%)
Query: 1277 QSPFSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSV 1335
Q +S ++ + + H+ +N + H ++ V A++RA++E+V +V RS+
Sbjct: 1354 QPQYSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSI 1413
Query: 1336 SIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL 1395
IA T +++V KD+A++S+E+R+ AAH M+ +L +A +TC+EPL SIS+ L+NS
Sbjct: 1414 KIAMTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSF 1473
Query: 1396 -QGLTIAS----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKH 1450
L AS E+++QA + DN +L C I++ A +KA +D +A + LR KH
Sbjct: 1474 ASALRTASPQQREMMDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KH 1532
Query: 1451 REGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1495
G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1533 ARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1577
Score = 49 (22.3 bits), Expect = 6.9e-69, Sum P(5) = 6.9e-69
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2322 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2364
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 1116 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 1162
Score = 42 (19.8 bits), Expect = 1.0e-175, Sum P(3) = 1.0e-175
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 973 KISFIINNISALNVEAKAKEFTEIL 997
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 1.9e-187, Sum P(3) = 1.9e-187
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1597 PAATELYAADSTEPVK-EP--GASSQSLPSTAAPERIGSSILEPSL 1639
P+A+ L D+ PV+ +P G +S S+ +AAP P+L
Sbjct: 698 PSASSL---DAISPVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNL 740
Score = 41 (19.5 bits), Expect = 1.3e-175, Sum P(3) = 1.3e-175
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 72 VFKYIMDKPNFSTVFSQ---SVKITEINEQLL 100
V K + +PNF +++S ++K E N+ +L
Sbjct: 1135 VMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVL 1166
Score = 39 (18.8 bits), Expect = 4.1e-225, Sum P(4) = 4.1e-225
Identities = 19/87 (21%), Positives = 30/87 (34%)
Query: 915 LHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI 974
+ N + AM++ F SAL A+ ++RE +A A QD
Sbjct: 1445 MRNLTAGMAMITCREPLLMSISTNLKNSFASALR----TASPQQREMMDQAAAQLAQDNC 1500
Query: 975 SFIINNISALNVEAKAKEFTEILKEQY 1001
I VE E + L ++
Sbjct: 1501 ELACCFIQKTAVEKAGPEMDKRLATEF 1527
Score = 39 (18.8 bits), Expect = 2.3e-224, Sum P(5) = 2.3e-224
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 1590 SVNAAFTPAATELYAADSTEPVKEPGASSQ 1619
S+N T T L A D TE + EP + Q
Sbjct: 1069 SINT--TNIDTLLVATDQTERIVEPPENIQ 1096
Score = 37 (18.1 bits), Expect = 2.3e-224, Sum P(5) = 2.3e-224
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1371 AGSLAHVTCKEPLRGSISSQLRNS 1394
A + A V K PL G +++ + S
Sbjct: 1020 AQAQAQVPAKAPLAGQVNTMVTTS 1043
>UNIPROTKB|E1BXD4 [details] [associations]
symbol:LOC100858397 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005778 "peroxisomal membrane" evidence=IEA]
GO:GO:0005778 GO:GO:0000932 OMA:YLKARAP InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 EMBL:AADN02051617 EMBL:AADN02051618
IPI:IPI00596498 Ensembl:ENSGALT00000040121 ArrayExpress:E1BXD4
Uniprot:E1BXD4
Length = 2129
Score = 1474 (523.9 bits), Expect = 8.9e-311, Sum P(5) = 8.9e-311
Identities = 333/770 (43%), Positives = 464/770 (60%)
Query: 1653 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1707
Q L ++ A + Q + S + +++ SRD AAL + QK +GL + S
Sbjct: 1374 QHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL 1433
Query: 1708 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1761
L + HL +L A++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1434 LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1493
Query: 1762 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDE---SRVVISELHNLVDALAKLIEIVRN 1818
+Y++H+A+ ++ G N A FA+ L++ L+ DE + V ++L + ++ L ++ R
Sbjct: 1494 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG 1553
Query: 1819 PXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYN-IPESVD-PDPVGFPEQVSML 1876
+ +A + +H N ++ I ++ + DP G E+ L
Sbjct: 1554 NAPEGLPQLMEVVRSNYEAMIDR-----AHGGPNFMMHSGISQASEYDDPPGLREKAEYL 1608
Query: 1877 FAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTE--VSVAHCLSS 1931
EW Y + A + +V Q+HQ G+LK DD+ RFFR TE V +++ +
Sbjct: 1609 LREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQA 1668
Query: 1932 EVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIFLLSKILTVTVKF 1989
E NP + +D + +L+ ++K + +KI LL+K+L + V
Sbjct: 1669 EQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV 1726
Query: 1990 ILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPA 2049
+L+D E ++ F PY R+FI LL++++ + V + NFQ L+AF N FH+L+P K P
Sbjct: 1727 LLQDHEVRQGEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG 1786
Query: 2050 FSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYK 2108
F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN EL P++ LYK
Sbjct: 1787 FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK 1846
Query: 2109 GTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKID 2168
GTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMRLPDP TPNLK+D
Sbjct: 1847 GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD 1906
Query: 2169 LLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAG 2228
+L EI PRI + + Q + D+D YLKT P +FLS+L+ L + + G
Sbjct: 1907 MLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSNLQV----SNEPG 1960
Query: 2229 TRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDT 2288
RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +DIFQ L DLDT
Sbjct: 1961 NRYNIQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDT 2013
Query: 2289 EGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPW 2348
EGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL ERLIVNRPHPW
Sbjct: 2014 EGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPW 2073
Query: 2349 GLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSM 2398
GLLITFIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K M
Sbjct: 2074 GLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVM 2123
Score = 550 (198.7 bits), Expect = 8.9e-311, Sum P(5) = 8.9e-311
Identities = 126/349 (36%), Positives = 195/349 (55%)
Query: 898 GQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAE 957
GQ S++ T++ K ++ P +S PS T NI+TL+ A +
Sbjct: 785 GQVSTIVTTSTTTTVAKTIT-ITRPTGVSFKKDVP-PSINTT--------NIDTLLVATD 834
Query: 958 RRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIE 1017
+ E +E P + VQ+KI+FI NN+S N+ K +E E +KE++ PW +QY+VMKR SIE
Sbjct: 835 QTERIVEPPEN-VQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIE 893
Query: 1018 PNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKL 1077
PNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLLKNLG WLG +
Sbjct: 894 PNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMI 953
Query: 1078 TIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAYQPPNPWTMAI 1135
T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE S+ ++PPNPWTMAI
Sbjct: 954 TLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTMAI 1013
Query: 1136 LGLLAEIYSMPNLKMNLKFDIEVLFKNLGVD---MKDITPTSLLKDRKR--EIEGNPDFS 1190
+ +LAE++ +LK + D ++ F L + + + P SLLKD+ R ++
Sbjct: 1014 MNVLAELHQEHDLKKGVVKD-QISFLALSCEELGIASLEPGSLLKDKDRLKNLDEQLSAP 1072
Query: 1191 NKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1239
KDV QP+ +P + S PP H ++ Y+
Sbjct: 1073 KKDV--KQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYS 1119
Score = 438 (159.2 bits), Expect = 8.9e-311, Sum P(5) = 8.9e-311
Identities = 116/424 (27%), Positives = 207/424 (48%)
Query: 232 EMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLEDNQNTF 289
E S+ D M E+GYG +C+ I+ F +T ++R+LG +ARTH+GL D
Sbjct: 3 ESSLADFMQEVGYGFCTSIEECRNIIMQFGVREVTAAQVARVLGMMARTHSGLTDGIPLQ 62
Query: 290 STFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTE 345
S G SD +WNV+VL+ +K+L P+ ++ V LD+ GF I
Sbjct: 63 SISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYELDHPGFQIRDS 122
Query: 346 EAFSFFM-SVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLP 404
+ + + + E FP++A+ WK+ EGQLSF+++++ +P ++F FA
Sbjct: 123 KGLHIVVFGIQRGLGMEVFPVNAIYRP-WKHAEGQLSFIQHSLINP-DIFCFADYPCHAV 180
Query: 405 YVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEMLLLGMA 464
D + + W +E+G + + +P+K CP+ML+L +
Sbjct: 181 TTDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDMLVLALL 240
Query: 465 HINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPNI---VLRGFVD----A 513
INT+++ +++E+ + P+ + + ++ +ILH WH +P+I ++ +
Sbjct: 241 QINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMAEWYMRG 300
Query: 514 QNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYK 573
+ + RIL++ Q+LK LS +L P F I LA +AS++E + L+KWL+ + +
Sbjct: 301 EQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTDKIREHG 360
Query: 574 DVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGLITSTKL 633
+ F + C+ F+K + + A L E + +L L+A G + S +L
Sbjct: 361 EPFIQACMTFLKRRCPSILGGLAPEKDQPKSA--QLPPETLATMLACLQACAGSV-SQEL 417
Query: 634 SEEI 637
SE I
Sbjct: 418 SETI 421
Score = 405 (147.6 bits), Expect = 8.9e-311, Sum P(5) = 8.9e-311
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 662 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 717
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 588 NQNFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLF 647
Query: 718 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 777
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 648 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIA 707
Query: 778 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 814
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 708 ALDRFKNRLKDYPQYCQHLASISHFIQFPHHLQEYIE 744
Score = 330 (121.2 bits), Expect = 8.9e-311, Sum P(5) = 8.9e-311
Identities = 74/225 (32%), Positives = 126/225 (56%)
Query: 1277 QSPFSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSV 1335
Q +S ++ + + H+ +N + H ++ V A++RA++E+V +V RS+
Sbjct: 1107 QPQYSYHDINVYSLGGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSI 1166
Query: 1336 SIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL 1395
IA T +++V KD+A++S+E+R+ AAH M+ +L +A +TC+EPL SI++ L+NS
Sbjct: 1167 KIAMTTCEQIVRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSF 1226
Query: 1396 Q-GLTIAS----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKH 1450
L AS +++EQA + DN +L C I++ A +KA +D +A + LR KH
Sbjct: 1227 ATALRAASPQQRDMMEQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KH 1285
Query: 1451 REGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1495
G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1286 ARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1330
Score = 49 (22.3 bits), Expect = 6.4e-70, Sum P(4) = 6.4e-70
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2322 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2364
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 867 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 913
Score = 41 (19.5 bits), Expect = 1.4e-226, Sum P(4) = 1.4e-226
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 1555 VASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEP 1614
V++ T ST+ T + I G S+N T T L A D TE + EP
Sbjct: 787 VSTIVTTSTTTTVAKT--ITITRPTGVSFKKDVPPSINT--TNIDTLLVATDQTERIVEP 842
Query: 1615 GASSQ 1619
+ Q
Sbjct: 843 PENVQ 847
Score = 41 (19.5 bits), Expect = 6.1e-177, Sum P(3) = 6.1e-177
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 72 VFKYIMDKPNFSTVFSQ---SVKITEINEQLL 100
V K + +PNF +++S ++K E N+ +L
Sbjct: 886 VMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVL 917
Score = 40 (19.1 bits), Expect = 3.2e-188, Sum P(3) = 3.2e-188
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 1597 PAATELYAADSTEPVKEPGASSQSLPSTAAPERIGSSILEPSL 1639
P+A+ L A + G +S SL +AAP P+L
Sbjct: 449 PSASSLDAISPVQIDSLAGMASLSLGGSAAPHTQSMQGFPPNL 491
Score = 38 (18.4 bits), Expect = 2.8e-226, Sum P(4) = 2.8e-226
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1371 AGSLAHVTCKEPLRGSISSQLRNSLQGLTIASEL 1404
A + A V K PL G +S+ + S T+A +
Sbjct: 771 AQAQAQVPAKAPLAGQVSTIVTTSTT-TTVAKTI 803
>DICTYBASE|DDB_G0276029 [details] [associations]
symbol:DDB_G0276029 "putative CCR4-NOT complex
subunit 1" species:44689 "Dictyostelium discoideum" [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0030015 "CCR4-NOT core
complex" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] dictyBase:DDB_G0276029 GO:GO:0005634
GO:GO:0005737 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0000122 GO:GO:0051726 GO:GO:0000288 GO:GO:0030015
GO:GO:0000175 eggNOG:COG5103 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 OMA:ANIAGTR
RefSeq:XP_643319.1 ProteinModelPortal:Q75JL4
EnsemblProtists:DDB0220028 GeneID:8620365 KEGG:ddi:DDB_G0276029
InParanoid:Q75JL4 ProtClustDB:CLSZ2445457 Uniprot:Q75JL4
Length = 2526
Score = 1230 (438.0 bits), Expect = 4.3e-303, Sum P(7) = 4.3e-303
Identities = 244/417 (58%), Positives = 305/417 (73%)
Query: 1974 SKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILS 2033
+K+ +L+K+L+V +K + KD E + FN RPY R+F N L+D++S DP+ + + IL
Sbjct: 2115 TKLNMLTKVLSVLIKILTKDYENNPSRFNQRPYLRIFENLLVDLTSPDPILEHVSNHILF 2174
Query: 2034 AFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPF 2093
F NA LQP K P F FAWL+L+SH+SFMPKLLI QK W LLV +FLEPF
Sbjct: 2175 CFVNALATLQPQKYPGFCFAWLDLLSHKSFMPKLLIRQ-QKQW--FHALLVQHFKFLEPF 2231
Query: 2094 LRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPR 2153
LR +L PVR LYKGTL+VLL+LLHDFPEFLC+YHF+ CDVIP +CIQ+RN+ILSAFPR
Sbjct: 2232 LRGGDLSEPVRVLYKGTLKVLLLLLHDFPEFLCEYHFSLCDVIPNTCIQLRNLILSAFPR 2291
Query: 2154 NMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSEL 2213
NMRLPDP TPNLKID+LP+I PP+I S A+L K ++ ++D+Y K P SFL +L
Sbjct: 2292 NMRLPDPFTPNLKIDMLPDINQPPKISSNFTASL--KGLKIEIDNYFKNRGP-YSFLLDL 2348
Query: 2214 KQK--LLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFL 2271
K K LL E +AGT+YNVPLINSLVLY+G AI Q+Q ++ A +
Sbjct: 2349 KNKHLLLTDKEEILAAGTKYNVPLINSLVLYIGTLAIPQIQRKSGVAPTPSQ-------- 2400
Query: 2272 VSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQ 2331
SA +DIF L DLD+EGRY+F NA ANQLRYPNNHTHY S V+L+L++E+ Q+II+EQ
Sbjct: 2401 -SAPMDIFHRLALDLDSEGRYIFFNAIANQLRYPNNHTHYLSCVILFLFSESGQDIIKEQ 2459
Query: 2332 ITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSC 2388
ITRVL ERLI N+PHPWGLLITFIELIKN RYNFW+ F + APEI +LF+SVA+SC
Sbjct: 2460 ITRVLLERLISNKPHPWGLLITFIELIKNLRYNFWSHGFTKVAPEIAQLFDSVAKSC 2516
Score = 661 (237.7 bits), Expect = 4.3e-303, Sum P(7) = 4.3e-303
Identities = 167/657 (25%), Positives = 326/657 (49%)
Query: 180 ILSLLQSKDHTQFVLNPVLPDELHDATSLRD-LDLFHECRDDDFDDILAEMEKEMSMGDV 238
I+S + ++ +++ + A++L+D L F + + D I+ M E++
Sbjct: 394 IISKVSQQNVPYQIISSIGYSSCSSASTLKDILFQFQKLTESDIAQIIVSMA-ELTSNTN 452
Query: 239 MNELGYGCSADASQCKEILSL-FTPLTEITLSRI--LGAIARTHAGLEDNQNTFSTFTLA 295
N + D ++ +I L F L + S + + + E + T +T +
Sbjct: 453 NNNNNNNENNDENEKTKIPYLTFNDLNDKETSNTSPTSSSPKQQSENESSSTTTTTNSNN 512
Query: 296 LGCSTMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVY 355
+ +++P WN+ + V IK+L P +W V+ +D + +F ++VY
Sbjct: 513 NNNNNTTNIP--DEWNISIFVDVIKELYPTIDWDIVIREMDCPIVNNMDQRGLAFILAVY 570
Query: 356 KYACQ------EPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAV 409
K A Q +PFP+ + VW N+ Q+ FL+ A+ S + F F +S ++ +D
Sbjct: 571 KKATQVDQQQSKPFPIDFILDRVWVNSLSQIQFLKIAIQS--DFFPFQNSTKKR--IDQS 626
Query: 410 PGLKLQSGQANHAWXXXXXXXXXXXXSEMG--HASFARSMLEYPLKQCPEMLLLGMAHIN 467
K H W S++ H S + + + P+K C ++L+LG++ I
Sbjct: 627 SLSKSTPPTIAH-WNSISLIETLLQLSDIDSEHYSKVKPLFDSPIKNCLDLLILGVSSIT 685
Query: 468 TAYNLIQYEVSFAVFPMIIKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEI 527
N +Q E+ +F ++ ++ +W +P V++ D +P R+L++
Sbjct: 686 LKKNKLQNELLTTLFQTLLSQHNYQSIVSQLWKDHPLTVIQIMADITQKDPKELSRLLDV 745
Query: 528 CQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYK-DVFFEECLKFVKE 586
QELKIL +L PF + LA +ASQ+E + LE+W+ + F +EC+ F+ +
Sbjct: 746 AQELKILRQMLYCKTYPFIVNLAALASQREYLFLERWVQERMKEDDHQSFIKECISFLND 805
Query: 587 --VQFGRS-QDFSAQPFHHSGALLNLYMEKIPV-ILKLLKAHIGLITSTKLSEEIEKFQA 642
++ G+S ++ S S P +++ + + T ++ ++
Sbjct: 806 RVLKKGKSGEENSNTAASASPTTATTGSGSFPPQSIQISNNVLSTLCKTLMAAP-DQIPT 864
Query: 643 VVLDSTPRLQNG-EAADSSTSEG-YADDIEAEANSYFHQMFSGQLTIEAMVQMLARFKES 700
+ + + + A+S T+E + ++E E NSYF +++SG+++++ ++ +L +K S
Sbjct: 865 DLFNDLKNISAALQTAESETTERRFPAEVEDETNSYFIKLYSGEISVDQIISVLKEYKVS 924
Query: 701 SVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVL 760
+++ IF+C++ NLF+EY+F YP+++L+I +LFGS+IK+QL++ L +AL+ VL
Sbjct: 925 KNQKDQDIFKCLLFNLFDEYKFLSDYPDKELKITGLLFGSLIKNQLISSQPLRVALKYVL 984
Query: 761 DALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERAL 817
+A+R P +S MF+FG +L F +RL+EWPQY I I H R + +++ + + +
Sbjct: 985 EAMRFPLNSNMFIFGVNSLISFANRLVEWPQYWAQICSIDHFRDNYGDIILSVNKII 1041
Score = 587 (211.7 bits), Expect = 4.3e-303, Sum P(7) = 4.3e-303
Identities = 121/270 (44%), Positives = 173/270 (64%)
Query: 943 FGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYY 1002
F + + I TL+ A++ P + +DKI FIINNIS N++ KAK+ +ILK +YY
Sbjct: 1224 FSTTIPIGTLLNASKEMIQPDDI----TKDKIYFIINNISQNNLDVKAKDLKDILKPEYY 1279
Query: 1003 PWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSE 1062
+FAQY+V+KR SIE NFH LYL F+D++ ++ ++ +++N LL SE I+
Sbjct: 1280 DYFAQYLVVKRVSIEANFHALYLAFIDRLCIPTISERVLFHSHQNVHTLLKSEKIRVDHS 1339
Query: 1063 ERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSS 1122
ERSLLKNLG WLG T+ RN+ L + I PK L+I A E GL+IA++PF +K+LE CQ S
Sbjct: 1340 ERSLLKNLGGWLGLNTLARNKPLLQKVISPKDLLIYAAENGLLIAIVPFVAKLLEHCQQS 1399
Query: 1123 LAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRK-- 1180
++PPNPW MAIL L+ EIY + K N+KF++E+L NL VD+ + PT++L DR+
Sbjct: 1400 KVFRPPNPWVMAILRLMVEIYQLKESKNNIKFEVELLCNNLSVDINTVKPTTILADRRQQ 1459
Query: 1181 REIEGNPDFSNKDVGASQPQLVPEVKPAIV 1210
REIE + KD S L+ + +V
Sbjct: 1460 REIEQQEENMRKDNKQSSIDLLSNLPRYLV 1489
Score = 463 (168.0 bits), Expect = 4.3e-303, Sum P(7) = 4.3e-303
Identities = 105/234 (44%), Positives = 146/234 (62%)
Query: 1289 IPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLK 1348
+ N+ +++ + A F++ VP+A D+A++EI++ +V+RSV+IA T+KELV K
Sbjct: 1481 LSNLPRYLVYTPSIGAYAQSPIFKKAVPLAFDKAVREIIAPVVERSVAIAVITSKELVSK 1540
Query: 1349 DYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQ---GLTIASELL 1405
D+A E+DE ++ A+HLMV +LAGSLA VTCK+PLR SI + LR LQ GL L
Sbjct: 1541 DFATEADEQKMKRASHLMVQNLAGSLALVTCKDPLRVSIIAYLRTLLQNNNGLPPCEIPL 1600
Query: 1406 EQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSS-FFDPNIY 1464
E A+ LV N+NLD C+++E AAT+KAI +ID +A + R KHRE +GS FFD
Sbjct: 1601 EHAISLVCNENLDFACSIVETAATEKAIISIDEVLASSYNDRLKHREQMGSQPFFDMGYL 1660
Query: 1465 AQGSMG-VPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLTSS 1517
+PE+LRPKPG + Q RVYEDF LP S A +LT+S
Sbjct: 1661 TTTIYNTLPESLRPKPGGIQPDQFRVYEDFTNLPHHINISNVGGAGETDNLTAS 1714
Score = 208 (78.3 bits), Expect = 4.3e-303, Sum P(7) = 4.3e-303
Identities = 85/407 (20%), Positives = 174/407 (42%)
Query: 1541 AGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVHIGA---ADGGILHNSESESVNAAFTP 1597
AG T S +D+ SG +ST G +S LV IL + + +
Sbjct: 1705 AGETDNLTASPTNDIVSGAIKST--GVMSQQLVQQQMQQQVSQQILQQQQQQQIQMQLLQ 1762
Query: 1598 AATELYAADSTEPV-KEPGASSQSLPSTAAPERIGSSILEPSLQTRDALDKYHIVAQKLD 1656
+ A + + ++ Q + + + +L D L+K+ ++ ++D
Sbjct: 1763 QQAQQAALQAAQQQHQQQQQQQQQVQQQQQQVQQQQQQQQQNLPNSDLLEKFGLLLNEVD 1822
Query: 1657 ALI-----GNDAREAEVQGVISE-VPEIILRCISRDEAALAVAQKVFKGLYENASNNLHF 1710
++ E E+ IS+ + ++ S+ E AQ++ L E + +
Sbjct: 1823 KVVIRVLAQTQNIELELLYTISQQILTLVRMSQSQSELLAGFAQRLCNRLCEQEKKPI-Y 1881
Query: 1711 SAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKL 1770
+ +L +RD + V+ +TS++++S ++K NR + GLI +L+N+ EY++ ++K+
Sbjct: 1882 EIYFELLEVLRDWDQKVITTITSFLLFSTPDKKLNRVLVAGLIIHQLININEYDLALSKM 1941
Query: 1771 IDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLIEIVRNPXXXXXXXXXXX 1830
+ R+ +FAISLL+ + + + +SE + D L K+ R+P
Sbjct: 1942 MIDSRSAPPIDFAISLLRFCLVENNYANLSEFPSTFDLLQKISS--RSPSEMLAKTL--- 1996
Query: 1831 XXKDDKARQSKDKKAYSHTTANREDYNIPESVDPDPVGFPEQVSMLFAEWYQICELPGSN 1890
++ K++K + +ED + DP G E V L +W + ++
Sbjct: 1997 ---EEIKNSPKEEKKRRISRIRQEDMIV------DPPGLREAVIALLQDWL-LFSSTNTD 2046
Query: 1891 DAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVSVA-HCLSSEVINP 1936
+Y+ Q+ Q +K + +FFR E ++ + + E+ +P
Sbjct: 2047 QKILIQYLGQVLQISFMKNELYFIKFFRLGLEYALERYAANVEIQSP 2093
Score = 86 (35.3 bits), Expect = 1.1e-242, Sum P(7) = 1.1e-242
Identities = 24/127 (18%), Positives = 61/127 (48%)
Query: 165 QRSSDLSKHVDSLMQILSLLQS-KDHTQFVLNPVLPDELHDATSLRDLDLFHECRDDD-- 221
Q++S ++ +++ LQS L+P++ ++ + + + D+
Sbjct: 330 QQNSQQQQNQQHYSEVIKYLQSISPPNSLALSPLVDNDQSSGSGGGGITNSKRLQQDNPS 389
Query: 222 -FDDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHA 280
+ I++++ ++ +++ +GY + AS K+IL F LTE +++I+ ++A +
Sbjct: 390 YVNSIISKVSQQNVPYQIISSIGYSSCSSASTLKDILFQFQKLTESDIAQIIVSMAELTS 449
Query: 281 GLEDNQN 287
+N N
Sbjct: 450 NTNNNNN 456
Score = 65 (27.9 bits), Expect = 4.3e-303, Sum P(7) = 4.3e-303
Identities = 26/112 (23%), Positives = 50/112 (44%)
Query: 73 FKYIMDKPNFSTVFSQSVKITEI-NEQLLENLSDVLNLSLPERIGIGLALSDSENLDALM 131
F + +P+F +V ++ E+ N + L + S L L+ I +GLALS S + +
Sbjct: 197 FSRLTKQPHFISVLCKAFDGYEVLNNEFLVHFSSTLKLTPSHEIMLGLALSQSLDKEVRE 256
Query: 132 CGKNFCM---AQIERLCANPVPMNSAEQIQNIIMF-LQRSSDLSKHVDSLMQ 179
F + Q+ + +P N Q+ + F +Q ++ L + + Q
Sbjct: 257 QADKFLLNTLIQLSQSNTKSLPENLLHQL--LYKFKIQETNQLQQQNNQQQQ 306
Score = 58 (25.5 bits), Expect = 4.3e-303, Sum P(7) = 4.3e-303
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 4 LSSTVPSQIRFLLQSLNEANADSVFRELCQFI-EYGIEGSTMMLQTCMDHLNLHGT 58
LS + +QI+ L+ +L + + S EL Q I +YG + + + +D ++ T
Sbjct: 92 LSFVIATQIKNLISNLTKKSYKSNSSELSQIINQYGSQAEIYIFRCLVDSIDFKNT 147
Score = 50 (22.7 bits), Expect = 7.8e-60, Sum P(4) = 7.8e-60
Identities = 28/111 (25%), Positives = 48/111 (43%)
Query: 1128 PNPWTMAI-LGLLAEIYSMPNLKMN-------LKFDIEVLFKNLGVD--MKDITPTSLLK 1177
P+P+T + + +L +I P + N LK +I+ FKN G + D+ LL
Sbjct: 2296 PDPFTPNLKIDMLPDINQPPKISSNFTASLKGLKIEIDNYFKNRGPYSFLLDLKNKHLLL 2355
Query: 1178 DRKREI-----EGNPDFSNKDVGASQPQLVPEV-KPAIVSPLGHVDLPLDV 1222
K EI + N N V +P++ + + V+P P+D+
Sbjct: 2356 TDKEEILAAGTKYNVPLINSLVLYIGTLAIPQIQRKSGVAPTPSQSAPMDI 2406
Score = 49 (22.3 bits), Expect = 2.4e-186, Sum P(7) = 2.4e-186
Identities = 20/69 (28%), Positives = 29/69 (42%)
Query: 932 ARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI-SFIINNISALNVEAKA 990
A P + + + F NI + AE T PA EV+D+ S+ I S E
Sbjct: 857 AAPDQ-IPTDLFNDLKNISAALQTAESETTERRFPA-EVEDETNSYFIKLYSG---EISV 911
Query: 991 KEFTEILKE 999
+ +LKE
Sbjct: 912 DQIISVLKE 920
Score = 44 (20.5 bits), Expect = 1.1e-178, Sum P(4) = 1.1e-178
Identities = 19/116 (16%), Positives = 49/116 (42%)
Query: 1 MLRLSSTVPSQIRFLLQSLNEANADSVFRELCQFIE---YGIEGSTMMLQTCMDHLNLHG 57
M++ +I F++ ++++ N D ++L ++ Y ++++ N H
Sbjct: 1240 MIQPDDITKDKIYFIINNISQNNLDVKAKDLKDILKPEYYDYFAQYLVVKRVSIEANFHA 1299
Query: 58 TGLKNPQLESVVASVFKYIM--DKPNFSTVF-SQSVKITEINEQLLENLSDVLNLS 110
L + ++ + ++ N T+ S+ +++ LL+NL L L+
Sbjct: 1300 LYLAFID-RLCIPTISERVLFHSHQNVHTLLKSEKIRVDHSERSLLKNLGGWLGLN 1354
Score = 42 (19.8 bits), Expect = 1.0e-124, Sum P(7) = 1.0e-124
Identities = 13/62 (20%), Positives = 31/62 (50%)
Query: 1737 YSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESR 1796
Y D+E K + LI+++L++ V + +++ R + I + +L++ +R
Sbjct: 950 YPDKELKITGLLFGSLIKNQLISSQPLRVALKYVLEAMRFPLNSNMFIFGVNSLISFANR 1009
Query: 1797 VV 1798
+V
Sbjct: 1010 LV 1011
Score = 42 (19.8 bits), Expect = 4.0e-124, Sum P(6) = 4.0e-124
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 1775 RNKAATEFAISLLQTLVTDES-RVVISEL 1802
+NK E +L QTL++ + + ++S+L
Sbjct: 688 KNKLQNELLTTLFQTLLSQHNYQSIVSQL 716
Score = 41 (19.5 bits), Expect = 9.3e-242, Sum P(6) = 9.3e-242
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 1781 EFAISLLQTLVTDESRVVISEL 1802
+FA S+++T T+++ + I E+
Sbjct: 1613 DFACSIVETAATEKAIISIDEV 1634
Score = 39 (18.8 bits), Expect = 1.5e-241, Sum P(6) = 1.5e-241
Identities = 9/39 (23%), Positives = 19/39 (48%)
Query: 1372 GSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQ 1410
G ++ ++ ++ +S Q+ Q I +LL+Q Q
Sbjct: 1728 GVMSQQLVQQQMQQQVSQQILQQQQQQQIQMQLLQQQAQ 1766
Score = 39 (18.8 bits), Expect = 5.4e-181, Sum P(6) = 5.4e-181
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 1176 LKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGH 1215
+ + KR + NP + N + Q VP I+S +G+
Sbjct: 377 ITNSKRLQQDNPSYVNSIISKVSQQNVPY---QIISSIGY 413
Score = 39 (18.8 bits), Expect = 5.4e-181, Sum P(6) = 5.4e-181
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1026 KFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLT 1078
K L + N +N I + + +N + S + SS S LK++ KLT
Sbjct: 381 KRLQQDNPSYVNSIISKVSQQNVPYQIISSIGYSSCSSASTLKDILFQFQKLT 433
Score = 38 (18.4 bits), Expect = 9.4e-185, Sum P(5) = 9.4e-185
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 1833 KDDKARQSKDKKAYSHTTANREDYNIP-ESVDPDPV 1867
KDD R+ + A+S T N E + PD +
Sbjct: 1211 KDDDKRKKDQEDAFSTTIPIGTLLNASKEMIQPDDI 1246
Score = 38 (18.4 bits), Expect = 3.2e-57, Sum P(5) = 3.2e-57
Identities = 10/54 (18%), Positives = 24/54 (44%)
Query: 1978 LLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQI 2031
LL I+ K +L+ ++ K P P+ + ++++ L + F++
Sbjct: 1381 LLIAIVPFVAK-LLEHCQQSKVFRPPNPWVMAILRLMVEIYQLKESKNNIKFEV 1433
Score = 38 (18.4 bits), Expect = 4.0e-57, Sum P(5) = 4.0e-57
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 2009 LFINWLLDMSSLDPVADGSNFQ 2030
L +N +++ S DP+ +G FQ
Sbjct: 1035 LSVNKIIESS--DPIKNGMEFQ 1054
Score = 37 (18.1 bits), Expect = 2.7e-157, Sum P(6) = 2.7e-157
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1981 KILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLD 2021
K++T F+L +KK N L I+ L++++ D
Sbjct: 1897 KVITTITSFLLFSTPDKK--LNRVLVAGLIIHQLININEYD 1935
Score = 37 (18.1 bits), Expect = 7.0e-142, Sum P(7) = 7.0e-142
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 1383 LRGS-ISSQLRNSLQGLTIASELLEQAVQLVTNDNL 1417
L GS I +QL +S Q L +A + + +A++ N N+
Sbjct: 961 LFGSLIKNQLISS-QPLRVALKYVLEAMRFPLNSNM 995
Score = 37 (18.1 bits), Expect = 4.0e-57, Sum P(5) = 4.0e-57
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 2230 RYNVPLINSLVLYVGMQAIHQL----QTRTSHAQ 2259
R +P I+ VL+ Q +H L + R H++
Sbjct: 1307 RLCIPTISERVLFHSHQNVHTLLKSEKIRVDHSE 1340
>FB|FBgn0085436 [details] [associations]
symbol:Not1 "Not1" species:7227 "Drosophila melanogaster"
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IMP] [GO:0030014 "CCR4-NOT complex"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] EMBL:AE013599 GO:GO:0005737
GO:GO:0007095 GO:GO:0048813 GO:GO:0007517 GO:GO:0030014
GO:GO:0000289 KO:K12604 OMA:YLKARAP InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 UniGene:Dm.4102 GeneID:5740252
KEGG:dme:Dmel_CG34407 CTD:5740252 FlyBase:FBgn0085436 ChiTaRS:NOT1
GenomeRNAi:5740252 NextBio:20891292 RefSeq:NP_001097242.1
RefSeq:NP_724798.3 STRING:A8DY81 EnsemblMetazoa:FBtr0112672
EnsemblMetazoa:FBtr0304957 UCSC:CG34407-RC PhylomeDB:A8DY81
Bgee:A8DY81 Uniprot:A8DY81
Length = 2505
Score = 1342 (477.5 bits), Expect = 3.6e-269, Sum P(6) = 3.6e-269
Identities = 330/834 (39%), Positives = 458/834 (54%)
Query: 1589 ESVNAAFTPAATELYAADSTEPVKEPGASSQSLPSTAAPERIGSSILEPSLQTRDALDKY 1648
E+V A LYA S PG S A + + +P++ D Y
Sbjct: 1664 EAVRIKVGAAPATLYAVYSEFARSIPGFQQMSDRDIALFVPKPTDLSQPNVFANDDSMVY 1723
Query: 1649 HIVAQKLDALIGNDAREAEVQGVISEVPEIILRCIS----RD-EAALAVAQKVFKGLYEN 1703
+A K++A + +Q S++ ++ I+ RD E+A + + +GL E
Sbjct: 1724 GELASKMEAFMNTAIGVPTLQIQASKMHMLLNALIATRRLRDQESAFNLLTRAVEGLTEG 1783
Query: 1704 ASN--------NLHFSAHLAILAAIRDVCKLVVKELTSWVIYSD--EERKFNRDITMGLI 1753
N ++ + HL IL + + E + D EE ++N + LI
Sbjct: 1784 LVNMHENMEQMKMYQNIHLRILGLLNNSFGAPNTERAVTKCFFDIREEVRYNVEAARALI 1843
Query: 1754 RSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRV-VIS--ELHNLVDALA 1810
S +NL +++ + +D G N A F I+LL+ L+ D+ + ++S E V+ L
Sbjct: 1844 TSHFVNLNQFDGMLRDCMDNGNNYVAISFGIALLERLIMDDRVINIVSDNEFMATVELLG 1903
Query: 1811 KLIEIV-RNP-----XXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYNIPESVDP 1864
+L + R P D D+ + + S D
Sbjct: 1904 RLTQHRHRYPECIVNAIDTLWSGNFNSSSDYSPFNGNDRYLSGASHYIHSGMHHVRSCDT 1963
Query: 1865 D-PVGFPEQVSMLFAEWYQICELPGSNDAACTR----YVLQLHQNGLLKGDDMTDRFFRR 1919
D P G E+ L +W + R +V +++ G+LK DD+ RFFR+
Sbjct: 1964 DDPPGLQEKTEFLLKDWVALYTQQNQQSTRDARNFGAFVQKMNTYGILKTDDLITRFFRQ 2023
Query: 1920 LTEV--SVAHCLSSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS--SK 1975
T + V + + +E P F ID + L+ +++ E G+ +K
Sbjct: 2024 ATHICTDVVYRMFAEPSLP-----INQAKNKIFQWIDAFVHLIAMLVRHSG-EAGNPTTK 2077
Query: 1976 IFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAF 2035
I LL+K+L + + ++KD E + SF Y R F+ +++ + D + + I+SAF
Sbjct: 2078 INLLNKVLGIVLGTLIKDHEMRGVSFQQVGYHRFFMMLFMELCTADVILESLMHSIVSAF 2137
Query: 2036 ANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIG-NGQKGWPYIQRLLVNLLQFLEPFL 2094
A +H+L P P F FAWLEL+SHR F+ ++L+ GQKGWP +LL +L ++L PFL
Sbjct: 2138 AYTYHLLNPSVAPGFCFAWLELISHRVFLGRILVQIPGQKGWPLYAQLLQDLFKYLAPFL 2197
Query: 2095 RNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRN 2154
RN ELG PV+ LYKGTLRVLLVLLHDFPEFLCDYHF FCD IPP+C+QMRNIILSAFPRN
Sbjct: 2198 RNTELGKPVQLLYKGTLRVLLVLLHDFPEFLCDYHFGFCDTIPPNCVQMRNIILSAFPRN 2257
Query: 2155 MRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELK 2214
MRLPDP TPNLK+D+L + + P++ S ++ + D+D YLK P +FLSEL+
Sbjct: 2258 MRLPDPFTPNLKVDMLSDSSNAPKVLSSYIMNIQPANFKKDLDSYLKARAP-VTFLSELR 2316
Query: 2215 QKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSA 2274
L + SE GTRYN+ L+N+LV+YVG QAI ++ + + +T N + SA
Sbjct: 2317 GHLQVT-SEP---GTRYNMALMNALVMYVGTQAIALIRNK-NFVPNTSNIAH------SA 2365
Query: 2275 ALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITR 2334
+DIFQ L DLDTEGRYLFLNA ANQLRYPN+HTHYFS +L+L+AEAN E IQEQITR
Sbjct: 2366 HMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANSEAIQEQITR 2425
Query: 2335 VLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSC 2388
VL ERLIVNRPHPWGLLITFIELIKNP Y FW+ F+ CAPEI KLFESVARSC
Sbjct: 2426 VLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHDFVHCAPEITKLFESVARSC 2479
Score = 818 (293.0 bits), Expect = 3.6e-269, Sum P(6) = 3.6e-269
Identities = 207/594 (34%), Positives = 317/594 (53%)
Query: 932 ARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAK 991
A S +A NI+TL+ A +E + P VQDK +FI NN+S LN+ K
Sbjct: 1118 AAVSHATRMKSIANATNIDTLLVA--NQEEKVTVPPEPVQDKTAFIFNNLSQLNIPQKCD 1175
Query: 992 EFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVL 1051
E EI+ ++Y+PW AQY+V+KRAS+E NFH LY FLD + + +NR + + T N KVL
Sbjct: 1176 EIKEIMTKEYWPWLAQYLVLKRASMEFNFHTLYYNFLDALKNGEINRFVTKETLRNIKVL 1235
Query: 1052 LGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVI 1109
L S+ + +RSLLKNLG WLG +T+GRN+ + ++D KSL+ EAY KG ++ V+
Sbjct: 1236 LRSDKGVINFSDRSLLKNLGHWLGMMTLGRNRPILQLDLDLKSLLAEAYHKGQQELLFVV 1295
Query: 1110 PFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKD 1169
PF +KILE S ++ PNPWTM I+ +LAE++ P+LK+NLKF+IEVL K L +++
Sbjct: 1296 PFVAKILESSAKSRIFRSPNPWTMGIMYVLAELHQEPDLKLNLKFEIEVLCKTLNLELAK 1355
Query: 1170 ITPTSLLKD--RKREIE---GNPDFSNKDVGASQPQLVPEVK-PAIVSPLGHVDLP--LD 1221
+ LKD R IE P + AS P L E + PA P P
Sbjct: 1356 LRQVIYLKDPNRTHRIEEQMSQPKPKQLEPVASAPALPREQQSPAQPPPPPQQQQPPQQQ 1415
Query: 1222 VASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQSQSPFS 1281
V PP+S +Q AA + +++G + S LP+ + +S
Sbjct: 1416 VPPPPSSADVD---AQNAAAMMMAAGGANSTPGSVS---SPNLPTDSSQVALPPPEPRYS 1469
Query: 1282 VSQLSTP-IPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQ 1340
++ IG +++ L + + +V A++R I + + IV RS+ IA
Sbjct: 1470 YVDVNVSNFQLIGQQLVLPPNTPFLHANPGIKHMVVNAVERTITDWLQPIVDRSIRIACA 1529
Query: 1341 TTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL----Q 1396
TT++++ KD+A+++DE R+ AAH MV +LA +A +T K+ + +IS L +L
Sbjct: 1530 TTEQIIRKDFALDADENRMRTAAHQMVRNLAAGMAMITGKDEIARAISQNLHKALLSGLN 1589
Query: 1397 GLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGS 1456
G+ +E+ A+QL + +N++L CA I++ + +KA ID ++ R+ RE G+
Sbjct: 1590 GMPSMAEIQAAAMQLAS-ENVELVCAFIQKTSAEKAAAEIDRRLSTDFETRKIAREE-GN 1647
Query: 1457 SFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR-LPWQNQSSQGSHAM 1509
F D I +PEA+R K G + VY +F R +P Q S A+
Sbjct: 1648 RFVDAQILTYQQERLPEAVRIKVGAAPATLYAVYSEFARSIPGFQQMSDRDIAL 1701
Score = 359 (131.4 bits), Expect = 3.6e-269, Sum P(6) = 3.6e-269
Identities = 73/152 (48%), Positives = 103/152 (67%)
Query: 668 DIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFF 723
++E E NSYF ++++ Q L+I+ ++ +L RFKESS +RE +F CM+ NLFEEYRFF
Sbjct: 911 EVEDEVNSYFQRIYNHQPNPTLSIDEVLDILQRFKESSNRREQEVFLCMLRNLFEEYRFF 970
Query: 724 PKYPERQLRIAAVLFGSIIKHQLV-THLTLGIALRGVLDALRKPADSKMFVFGTKALEQF 782
+YPE++L+I A LFG II LV T + LG++LR VLDALRKP SK++ FG AL++F
Sbjct: 971 CQYPEKELQITAQLFGGIIDRNLVPTFVALGLSLRCVLDALRKPDGSKLYYFGVTALDRF 1030
Query: 783 VDRLIEWPQYCNHILQISHLRSTHAELVAFIE 814
RL + +YC HI I H L+ ++E
Sbjct: 1031 RTRLHTYNKYCEHIRSIPHFSDFPPHLIQYVE 1062
Score = 262 (97.3 bits), Expect = 3.6e-269, Sum P(6) = 3.6e-269
Identities = 70/286 (24%), Positives = 132/286 (46%)
Query: 309 SWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYAC-QEPFPLHA 367
+W DV V+A+K++ P NW V LD+ F + +++ + A FP H
Sbjct: 410 TWKPDVFVQALKEVVPQLNWKDVCMELDHPEFVLKDRIGLELLLTILRLATGSNIFP-HP 468
Query: 368 VC-GSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWXXX 426
C W NTEGQLS + + +P ++F+FA P +D + + +W
Sbjct: 469 ECIYRHWANTEGQLSLIATMLKNP-DLFSFADFVFSQPALDVLKTAPDADNKEISSWKSL 527
Query: 427 XXXXXXXXXSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMII 486
++ G+ + + ++P + CP++L L + + + ++ ++ + P +
Sbjct: 528 HLVEVLLSIADKGYYTQVHELFKFPAQNCPDVLFLALLNTSPPMTPLRQDLFNQLIPTFL 587
Query: 487 KSTMSNGMIL-HIWHVNPNIVLRG---------FVDAQNMEPDCTIRILEICQELKILSS 536
+ ++ +IL W N N LR ++ + RIL++ Q+LK LS+
Sbjct: 588 GNHPNSNVILASAWSSN-NFQLRSNIMNAMSEWYLRGNEFDQVKLSRILDLAQDLKALSA 646
Query: 537 VLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLK 582
+L F I LA +AS++E + LEKWL+ + + + F + +K
Sbjct: 647 LLNARSFLFIIDLACLASRREYLKLEKWLTDKIREHGEPFMQAIIK 692
Score = 63 (27.2 bits), Expect = 3.6e-48, Sum P(6) = 3.6e-48
Identities = 70/299 (23%), Positives = 115/299 (38%)
Query: 1969 VEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWL--LDMSSLDPVADG 2026
++ G F+ + L +K +L+ +++ +F+ R + +WL + + P+
Sbjct: 1215 LKNGEINRFVTKETLR-NIKVLLR-SDKGVINFSDRSLLKNLGHWLGMMTLGRNRPILQ- 1271
Query: 2027 SNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPY-IQRLLVN 2085
+ + S A A+H Q + F ++ + S K I W I +L
Sbjct: 1272 LDLDLKSLLAEAYHKGQQELL--FVVPFVAKILESS--AKSRIFRSPNPWTMGIMYVLAE 1327
Query: 2086 LLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFC---DVIPPSCIQ 2142
L Q EP L+ L + L K TL + L L +L D + T + P Q
Sbjct: 1328 LHQ--EPDLK-LNLKFEIEVLCK-TLNLELAKLRQVI-YLKDPNRTHRIEEQMSQPKPKQ 1382
Query: 2143 MRNIILS-AFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFS-EVDAALRAKQMRADVDDYL 2200
+ + + A PR + P P + P+ + PP S +VDA A M A
Sbjct: 1383 LEPVASAPALPREQQSPAQPPPPPQQQQPPQQQVPPPPSSADVDAQNAAAMMMAAGGANS 1442
Query: 2201 KTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLIN-SLVLYVGMQAIHQLQTRTSHA 2258
G S L ++ LPP E RY+ +N S +G Q + T HA
Sbjct: 1443 TPGSVSSPNLPTDSSQVALPPPEP-----RYSYVDVNVSNFQLIGQQLVLPPNTPFLHA 1496
Score = 60 (26.2 bits), Expect = 3.6e-269, Sum P(6) = 3.6e-269
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 7 TVPSQIRFLLQSLNEANADSVFRELCQFI-EYGIEGSTMMLQTCMDHLN 54
T P+ IR L++ +N+ N + ++ QF+ E+G+E L+ +N
Sbjct: 9 TPPTHIRNLVKHVNKRNFNESSEQINQFVKEHGLEADRSSLRHLFSVIN 57
Score = 60 (26.2 bits), Expect = 1.3e-156, Sum P(5) = 1.3e-156
Identities = 30/108 (27%), Positives = 41/108 (37%)
Query: 1198 QPQLVPEVKPAIVSPLGH--VDLPLDVASPPN----SGG-PTHLLSQYAAPLRLSSGTLM 1250
QP LVP P I+ GH +DLP + PP SG + PL S L
Sbjct: 767 QPGLVPPPPPTILR--GHRGMDLPGGIVPPPPQQPFSGNLNAQMFGPGMDPLTNMSNNLA 824
Query: 1251 E---DEKLAALGISDQLPSAQGLFQASQSQSPFSVSQL--STPIPNIG 1293
A + L S L + P ++ Q+ + P PN+G
Sbjct: 825 GLNLSGPNGAFNFGNMLTSPSRLMTPGANPYPLNLMQMPQAPPPPNVG 872
Score = 50 (22.7 bits), Expect = 3.6e-269, Sum P(6) = 3.6e-269
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 241 ELGYGCSADASQCKEIL-SLFTPLTEIT---LSRILGAIARTHAGLED-NQN 287
E+GY ++ +CK L S E+ +++I+G + R H+ L D N N
Sbjct: 296 EIGYEFTSSVEECKNHLCSRERERAELQSKDVAKIVGLMCRRHSSLLDCNVN 347
Score = 47 (21.6 bits), Expect = 1.6e-132, Sum P(3) = 1.6e-132
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 1537 YSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVHIGAAD 1579
Y S+ + S A TT S S+ F + +L +G D
Sbjct: 225 YGSTTATIAGAGASETDAEAEATTNSNSSSFEADALNEVGIED 267
Score = 46 (21.3 bits), Expect = 1.4e-133, Sum P(4) = 1.4e-133
Identities = 18/79 (22%), Positives = 33/79 (41%)
Query: 919 VSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKISFII 978
V A ++ + F R + + F T +A A ET EA A+ + SF
Sbjct: 199 VEAQFLIKLREEFPRQAVPLVLAPFLYGSTTAT-IAGAGASETDAEAEATTNSNSSSFEA 257
Query: 979 NNISALNVEAKAKEFTEIL 997
+ ++ + +E +EI+
Sbjct: 258 DALNEVGIEDIYDHLSEII 276
Score = 46 (21.3 bits), Expect = 1.8e-46, Sum P(6) = 1.8e-46
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 2291 RYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRV 2335
+YL L A+ + + HT Y++F+ E N+ + +E + +
Sbjct: 1191 QYLVLKRASMEFNF---HTLYYNFLDALKNGEINRFVTKETLRNI 1232
Score = 45 (20.9 bits), Expect = 6.1e-246, Sum P(5) = 6.1e-246
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 632 KLSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYADDIEAEANS 675
KL EE + QAV L P L A + + D EAEA +
Sbjct: 206 KLREEFPR-QAVPLVLAPFLYGSTTATIAGAGASETDAEAEATT 248
Score = 44 (20.5 bits), Expect = 6.4e-155, Sum P(5) = 6.4e-155
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 744 HQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLR 803
HQ+V +L G+A+ D + + + KAL + L P L
Sbjct: 1553 HQMVRNLAAGMAMITGKDEIARAISQNLH----KAL---LSGLNGMPSMAEIQAAAMQLA 1605
Query: 804 STHAELV-AFIERALARISSGHLE 826
S + ELV AFI++ A ++ ++
Sbjct: 1606 SENVELVCAFIQKTSAEKAAAEID 1629
Score = 44 (20.5 bits), Expect = 2.9e-46, Sum P(6) = 2.9e-46
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 2089 FLEPFLRNAELGVPVRFLYKGTLRVLLVLL 2118
FL+ L+N E+ RF+ K TLR + VLL
Sbjct: 1211 FLDA-LKNGEIN---RFVTKETLRNIKVLL 1236
Score = 42 (19.8 bits), Expect = 4.3e-132, Sum P(4) = 4.3e-132
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 1531 GQGNQGYSSSAGSTGFDAVSRPSDVASGTTESTSAG 1566
GQG G S+S+GS+ + + S S G
Sbjct: 357 GQGQGGGSNSSGSSQTQITPQQQNPGSSNNNDGSDG 392
Score = 40 (19.1 bits), Expect = 2.1e-245, Sum P(5) = 2.1e-245
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 53 LNLHGTGLKNPQLESVVASVF 73
L+L T LKNP L S VF
Sbjct: 482 LSLIATMLKNPDLFSFADFVF 502
Score = 40 (19.1 bits), Expect = 6.9e-132, Sum P(4) = 6.9e-132
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 1498 WQNQSSQGSHAMSAGSLTSSGDAAQASAYGLAGGQGNQGYSSS 1540
W Q QG + S+GS + Q + G+ G SSS
Sbjct: 355 WPGQG-QGGGSNSSGSSQTQITPQQQNPGSSNNNDGSDGNSSS 396
Score = 40 (19.1 bits), Expect = 4.3e-47, Sum P(5) = 4.3e-47
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1146 PNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKD 1178
PNLK+++ D K L + +I P + KD
Sbjct: 2266 PNLKVDMLSDSSNAPKVLSSYIMNIQPANFKKD 2298
Score = 39 (18.8 bits), Expect = 1.3e-211, Sum P(3) = 1.3e-211
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 31 LCQFIEYGIEG 41
L Q++EYG+ G
Sbjct: 1057 LIQYVEYGMHG 1067
Score = 39 (18.8 bits), Expect = 5.4e-47, Sum P(5) = 5.4e-47
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 1228 SGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQ 1263
+G PT ++ L + GTL++D ++ G+S Q
Sbjct: 2071 AGNPTTKINLLNKVLGIVLGTLIKDHEMR--GVSFQ 2104
Score = 38 (18.4 bits), Expect = 3.3e-245, Sum P(5) = 3.3e-245
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 325 NTNWIRVVENLDYEGFYIPTEE 346
+T+WI ++ + YE F EE
Sbjct: 287 DTSWINLILEIGYE-FTSSVEE 307
Score = 38 (18.4 bits), Expect = 5.3e-14, Sum P(6) = 5.3e-14
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 2154 NMRLPDPSTPNLKIDLLPE 2172
N ++P+ P + LLPE
Sbjct: 703 NAKVPEDQLPPKQAQLLPE 721
Score = 37 (18.1 bits), Expect = 2.5e-128, Sum P(6) = 2.5e-128
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 2371 IRCAPE-IEKLFESVARSCGGLKPVDDSMVSGWVPDNT 2407
+ AP + ++ ARS G + + D ++ +VP T
Sbjct: 1670 VGAAPATLYAVYSEFARSIPGFQQMSDRDIALFVPKPT 1707
>WB|WBGene00002845 [details] [associations]
symbol:let-711 species:6239 "Caenorhabditis elegans"
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0010467 "gene
expression" evidence=IMP] [GO:0040001 "establishment of mitotic
spindle localization" evidence=IMP] [GO:0030953 "astral microtubule
organization" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=IMP] GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0010467
GO:GO:0002119 GO:GO:0017148 GO:GO:0018996 GO:GO:0040011
GO:GO:0000003 GO:GO:0000956 GO:GO:0030953 EMBL:FO081266
GO:GO:0040001 eggNOG:COG5103 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 STRING:Q20937 PaxDb:Q20937
EnsemblMetazoa:F57B9.2 KEGG:cel:CELE_F57B9.2 UCSC:F57B9.2
CTD:175971 WormBase:F57B9.2 HOGENOM:HOG000020862 InParanoid:Q20937
OMA:HMDHEVR NextBio:890552 Uniprot:Q20937
Length = 2641
Score = 1067 (380.7 bits), Expect = 9.6e-196, Sum P(4) = 9.6e-196
Identities = 257/688 (37%), Positives = 379/688 (55%)
Query: 1729 KELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQ 1788
+ +T+ ++ + K+N + L + LL ++ H+A +D G N A FA ++
Sbjct: 1937 RRITTAIMQIRSDYKWNMEGIEILFKQNLLQSVLWDQHLAGSMDNGGNMEAVLFAQKFVR 1996
Query: 1789 TLVT-DESRV-VISELHNLV-DALAKLIEIVRNPXXXXXXXXXXXXXKDDKARQSKDKKA 1845
++ D SR+ + E L + L KL ++ ++ + A +
Sbjct: 1997 SIGGGDMSRIQFLKERFPLTCEQLTKLHQL-QSATRTEGMNNAMNNGAGNAAHHHAGLQQ 2055
Query: 1846 YSHTTANREDYNIPE-SVDPDPV-GFPEQ-----VSMLFAEWYQICELP-G--SNDAACT 1895
E +P+ S D G+ +Q V ++ EW +C P G S +
Sbjct: 2056 QPPVALPMEAAPMPQASADAMAQRGYDDQEMTAKVEIIMREWIGLCYSPTGQRSPQESLA 2115
Query: 1896 RYVLQLHQNGLLKGDDMTDRFFRRLTE--VSVA-HCLSSEVINPGTXXXXXXXXXXXFLA 1952
+ + +H++G+L DD +FFR E V ++ + SE + G +
Sbjct: 2116 QMIQLMHEHGVLATDDKITQFFRLCVENCVDISVRVMKSEQLANGLPTTLIRHRC--YYT 2173
Query: 1953 IDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFIN 2012
+D + KLM +++ Q +KI LL K+L + V + D E +K FN PY R+ I+
Sbjct: 2174 LDAFVKLMALMIRHSDNGQSQNKINLLKKLLNIIVGVLHMDHEVRKQDFNAMPYHRILIS 2233
Query: 2013 WLLDMSSLDPVA--DGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIG 2070
+++ DP+ + + IL AF F LQP ++P F+FAWL++V HR+ + +LL
Sbjct: 2234 LFNEITGPDPLKLLEPIAWSILEAFGQTFFALQPRRMPGFAFAWLDIVGHRNVIGRLLAN 2293
Query: 2071 NG--------QKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFP 2122
G + Y Q L+++ L+FL PFLRN +L + LYKGTLRVLLV+LHDFP
Sbjct: 2294 TGIAETVDAVKTAATYTQ-LIISHLKFLAPFLRNIQLPKSIAILYKGTLRVLLVILHDFP 2352
Query: 2123 EFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLK-IDLLPEIRDPPRIFS 2181
E LC++H+ CD IPP+C+Q+RN+ILSA+PR MRLPDP N K +D +PE+ P+ S
Sbjct: 2353 ELLCEFHYVICDTIPPNCVQLRNLILSAYPRQMRLPDPFALNFKQVDTIPEMAVEPK--S 2410
Query: 2182 EVD-AALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLINSLV 2240
++ A + +R +D+YL + FL L LL ++A GT+YN ++N+LV
Sbjct: 2411 NLNMATIIPDNIRIPLDEYL-ANRISVDFLPNLPT-LLQTQNQA---GTKYNTTVMNALV 2465
Query: 2241 LYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAAN 2300
LYVG++AI L R + N + T+++ DIFQ L LDTEGRYL N AN
Sbjct: 2466 LYVGIRAIEHLHLRRQRISTL--NIAHTSYM-----DIFQNLAIQLDTEGRYLLFNGIAN 2518
Query: 2301 QLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKN 2360
QLRYPN HTHYFS V LYL+ + + IQEQITR+LFERL+ RPHPWGLLITFIELIKN
Sbjct: 2519 QLRYPNAHTHYFSCVFLYLFKNSTNDTIQEQITRILFERLVALRPHPWGLLITFIELIKN 2578
Query: 2361 PRYNFWNQSFIRCAPEIEKLFESVARSC 2388
P YNFW F CAPEI++LF++VA +C
Sbjct: 2579 PTYNFWRYEFTSCAPEIQRLFQNVANTC 2606
Score = 678 (243.7 bits), Expect = 9.6e-196, Sum P(4) = 9.6e-196
Identities = 196/633 (30%), Positives = 318/633 (50%)
Query: 905 PLGDTS--SAQKLHNAVSAPAMLSISSGFAR--PSRGVTSTKFGSAL---NIETLVAAAE 957
P+G SA +AP + A P + + + G+ L N++TLV A
Sbjct: 1203 PVGSAQAGSASSTPTPAAAPTNWGAVARAASVDPKNSLPANRTGNVLSYTNVDTLVMATN 1262
Query: 958 RRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQ---YYPWFAQYMVMKRA 1014
+ I PA + DKISF+ NN+S N+ K E E++ + + W AQY+VMKR
Sbjct: 1263 KDGAEIAQPAEAIVDKISFLFNNLSQSNLIQKKDEVVEMISDHGDAFTLWLAQYIVMKRV 1322
Query: 1015 SIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSE---LIKSSSEERSLLKNLG 1071
SIE NF LY +F++ + + L++ I + T+ N ++LL ++ + S+ +R LLKNLG
Sbjct: 1323 SIEQNFQPLYNQFVNAIENPYLDQCIKRETFRNIRILLRTDKRTTVASNYSDRQLLKNLG 1382
Query: 1072 SWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAYQPPN 1129
SWLG +TI RN+ + ++D KSL++EAY KG ++ V+PF SKIL C + + P
Sbjct: 1383 SWLGAITIARNKPILLNDLDLKSLLLEAYYKGQAELLYVVPFISKILTACSKTSLFTPTC 1442
Query: 1130 PWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDF 1189
W +IL +LAE+++ P+LK+NLKF+IEVL K L VD+ + +LKD ++ +
Sbjct: 1443 AWIRSILKVLAELHNEPDLKINLKFEIEVLCKELNVDLNQLQMDGILKDTEKLVRVPQQL 1502
Query: 1190 SNKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASP--PNSGGPTHLLSQYAAPLRLSSG 1247
+ + ++P+ V+ I G + L SP P+ P + L SG
Sbjct: 1503 CDVKL-LTRPEAASPVQSKIHMS-GSAE-QLSGMSPAIPDQVKPA---TPQPTEAELQSG 1556
Query: 1248 TLMEDEKLAALGISDQLPSAQGLFQASQ-SQSPFSVSQLSTPIPNIGTHVIINQKLTALG 1306
T G Q AQ + + + +V IP HV I L
Sbjct: 1557 TG---------GGGSQGAEAQVVPNVTHFAYHDINVLTYDGLIP----HVKIVSHLPLFQ 1603
Query: 1307 LHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAA-HL 1365
LH H + +V AM AIKE++ + +R++ IA T+ LV KD+A++ +E + A+ H+
Sbjct: 1604 LHPHAKHLVRPAMIHAIKELIGPVTERALKIAMTVTESLVRKDFALDPEEQNLRAASFHM 1663
Query: 1366 MVASLAGSLAHVTCKEPLRGSISSQLRNSLQGL---TIAS----ELLEQAVQLVTNDNLD 1418
M A AG +A +TC++PL S+ S L N+ T A+ +++E A +T DN++
Sbjct: 1664 MRAMTAG-MAMITCRDPLASSMHSNLANAFSSSLRSTAANPEMKQMIEDAAATITQDNVE 1722
Query: 1419 LGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPK 1478
L I + A +KA Q I+ + + +++ SF+ I A +P+A+
Sbjct: 1723 LSTNFIVKTACEKATQDIEKRL--EADYQKRIAAKAEMSFYRDEIAAAIHAQLPKAIATV 1780
Query: 1479 PGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSA 1511
PG + +Y+ F +++ G +SA
Sbjct: 1781 PGPTDKALMGIYDQFSSRICGFKANSGEDPVSA 1813
Score = 277 (102.6 bits), Expect = 9.6e-196, Sum P(4) = 9.6e-196
Identities = 49/135 (36%), Positives = 90/135 (66%)
Query: 665 YADDIEAEANSYFHQMFS--GQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRF 722
+A+DI+ EANSYF +++S +++E ++ +L RF+ S+ +RE + C++ NLFEEYRF
Sbjct: 1036 FAEDIQEEANSYFEKIYSVNNAMSVENLIDLLKRFRVSNDRRERLVLACVVKNLFEEYRF 1095
Query: 723 FPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQF 782
F +YPER+LR A ++G II+ +++++ A+R V+++L ++ ++ FG AL+
Sbjct: 1096 FHEYPERELRTTAAVYGGIIREDIISNVQFATAVRKVIESLSADPNTMLWTFGIVALQHC 1155
Query: 783 VDRLIEWPQYCNHIL 797
+L +P+ C I+
Sbjct: 1156 RSKLCAYPKVCQMIV 1170
Score = 95 (38.5 bits), Expect = 9.6e-196, Sum P(4) = 9.6e-196
Identities = 48/280 (17%), Positives = 109/280 (38%)
Query: 324 PNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQ-EPFPLHAVCGSVWKNTEGQLSF 382
P+ NW+ V++ D E F I + F ++ Q + FP+ + W+ + QL
Sbjct: 439 PDINWVEVIKEFDSEEFAI-CRQTIIMFADIFPIMFQPQNFPVSFFL-TPWRYYDHQLRL 496
Query: 383 LRYAV--ASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWXXXXXXX--XXXXXSEM 438
+ + A + + H+ P ++ + + S W S+
Sbjct: 497 FEFMIEYADVWNISQYPHTKVLTPDLN-LKTIPDDSTSVVQLWNCQEFSNCLLTIANSQP 555
Query: 439 GHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFP-MIIKSTMSNGMILH 497
+ + Q ++ +L + T + + ++ P I+KS ++
Sbjct: 556 SLYNAIKQFYNVGSMQAGDVSMLALILSPTQWTTGRQDLIRHFLPSFILKSPNVTPVLNL 615
Query: 498 IW-------HVNPNIVLRGFVDAQNMEPDCTIRILEICQELKI--LSSVLEMIPS--PFA 546
+W H+ +++ + +IL++ ++K LS +L P F
Sbjct: 616 VWNDTSLSKHMRQHVIYC-LTSMHAADSSQLAKILDVAHDIKPTGLSELLNQAPKHLAFM 674
Query: 547 IRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKE 586
+ LA +AS+++ ++LEKW+ + + L+F+++
Sbjct: 675 VDLACLASKRDYLNLEKWIEDKEKAHGEAMTVAVLQFIQK 714
Score = 49 (22.3 bits), Expect = 7.7e-104, Sum P(5) = 7.7e-104
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 984 LNVEAKAKEFTEILKEQYYPWFAQ-YMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQ 1042
+N + ++ F E ++E+ +F + Y V S+E N DL +F +V++ R ++
Sbjct: 1027 MNEDFQSMTFAEDIQEEANSYFEKIYSVNNAMSVE-NLIDLLKRF--RVSNDRRERLVLA 1083
Query: 1043 ATYEN 1047
+N
Sbjct: 1084 CVVKN 1088
Score = 43 (20.2 bits), Expect = 5.7e-129, Sum P(4) = 5.7e-129
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 1256 AALGISDQLPSAQGLFQASQSQSPFSVSQLSTPIPNIGT 1294
A +GI DQ S F+A+ + P S S I + T
Sbjct: 1787 ALMGIYDQFSSRICGFKANSGEDPVSAEPGSGAITPVQT 1825
Score = 42 (19.8 bits), Expect = 9.9e-104, Sum P(5) = 9.9e-104
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 1723 VCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLID 1772
V K + +E + Y + E + + G+IR ++++ ++ + K+I+
Sbjct: 1085 VVKNLFEEYRFFHEYPERELRTTAAVYGGIIREDIISNVQFATAVRKVIE 1134
Score = 41 (19.5 bits), Expect = 1.2e-99, Sum P(3) = 1.2e-99
Identities = 46/179 (25%), Positives = 70/179 (39%)
Query: 1376 HVT-CKEPLRGSISSQLRNSLQGL-----TIASELLEQAVQLVTNDNLDLGCAV------ 1423
HV C + + SSQL L T SELL QA + + +DL C
Sbjct: 629 HVIYCLTSMHAADSSQLAKILDVAHDIKPTGLSELLNQAPKHLAF-MVDLACLASKRDYL 687
Query: 1424 -IEQAATDKAIQTIDGE---IAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVP-EALRPK 1478
+E+ DK + GE +A +++K++ + P A + G P E L+
Sbjct: 688 NLEKWIEDK--EKAHGEAMTVAVLQFIQKKYQHAQLVAAIAPKTQAT-TPGAPSEPLQVL 744
Query: 1479 PGHLSVSQQRVYEDFVRLPWQ---NQSSQGSHAMSAGSLT-SSGDAAQASAYGLAGGQG 1533
+S ++ L +Q S + S S G + SSG Q +G GG G
Sbjct: 745 IPFVSKRARKPLRQQFPLVFQVMKENSGRSSSVSSGGHVQQSSGSQPQQQQFG--GGSG 801
Score = 38 (18.4 bits), Expect = 1.4e-170, Sum P(4) = 1.4e-170
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 905 PLGDTSSAQKLHNAVSAPAMLSISSGFA 932
P T+S Q++H S P + + FA
Sbjct: 830 PTPPTTSQQQIHVQQSVPGPIQRPAQFA 857
Score = 38 (18.4 bits), Expect = 1.4e-102, Sum P(5) = 1.4e-102
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 1477 PKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSA 1511
P P +S S Q + L + S+ G HA A
Sbjct: 916 PPPSSMSPSTQMMRSLIPPLTQRQNSNSGWHAAPA 950
>ASPGD|ASPL0000078074 [details] [associations]
symbol:AN4965 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] EMBL:BN001303 EMBL:AACD01000084
eggNOG:COG5103 KO:K12604 InterPro:IPR007196 InterPro:IPR024557
Pfam:PF12842 Pfam:PF04054 OrthoDB:EOG4SFDF0 OMA:VIQEQIN
RefSeq:XP_662569.1 ProteinModelPortal:Q5B3B5 STRING:Q5B3B5
EnsemblFungi:CADANIAT00005431 GeneID:2872761 KEGG:ani:AN4965.2
HOGENOM:HOG000196837 Uniprot:Q5B3B5
Length = 2317
Score = 767 (275.1 bits), Expect = 8.4e-187, Sum P(5) = 8.4e-187
Identities = 200/604 (33%), Positives = 311/604 (51%)
Query: 1795 SRVVISELHNLVDALAKLIE-IVRN--PXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTA 1851
SR+++ + +D LA+L++ I+ N P +
Sbjct: 1733 SRLILQKNAAALDVLAELMDQILFNEEPSALRSDFSGSLEAMSKWLAEDSGLARAKEIIK 1792
Query: 1852 NREDYNIPESVDP---DPVGFP-EQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLL 1907
D IPE V+P D +Q+ +F EW I + PG+ D ++ +HQ ++
Sbjct: 1793 KLRDSGIPEVVNPLLSDKARSKRDQMEYIFTEWIGIYKAPGAVDRTYYAFLKDMHQRQVM 1852
Query: 1908 KGDDMTDRFFRRLTEVSVAHCLSSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILK-- 1965
+ + FFR ++SVA E NP FL ID AKL++ ++K
Sbjct: 1853 ANQEDSALFFRLSIDISVAR-FEHESQNPS------GSLDEAFLYIDALAKLVVLLVKFQ 1905
Query: 1966 ---CCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDP 2022
PV+ S F + IL+V + + + +FN R +FRLF + L + S
Sbjct: 1906 GEGTGPVKTSKSAYF--NSILSVLLLVLNHHQVMRGEAFNQRVFFRLFSSILCEYSMSGL 1963
Query: 2023 VADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGW-PYIQR 2081
+ +++ AN LQP P+F + W LVSHR FM +L + GW PY +
Sbjct: 1964 QHSDQHQEMMFTLANKLLSLQPKYYPSFVYGWFSLVSHRFFMSSMLNMPDRAGWGPYCEI 2023
Query: 2082 LLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCI 2141
+ V L ++ L++ + + LY+G LR+LL+L HDFPEF+ + HF FC+VIP C
Sbjct: 2024 MQVQL-SYIGEQLKSTTMTLVTMDLYRGMLRILLILHHDFPEFVAENHFQFCNVIPAHCA 2082
Query: 2142 QMRNIILSAFPRNM-RLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYL 2200
Q+RN++LSA+P + +LPDP LK++ L E+R+ PRI + L ++ +D+ L
Sbjct: 2083 QLRNLVLSAYPSSFQKLPDPFREGLKVERLEEMREAPRIAGDTAGPLLRAGIKNVIDNAL 2142
Query: 2201 KTGQPGSSFLSELKQKLLLPPSEAAS---AGTRYNVPLINSLVLYVGMQAIHQLQTRTSH 2257
++ S + +++ + S+ + A N+ L+N+L LYVG A+ S
Sbjct: 2143 QSNNVSDSVIQQIRDAVYDTESKESGLFHAPININLLLVNALALYVGQGAV-------SV 2195
Query: 2258 AQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLL 2317
+S GN + AF SA + + L + L E RY L+A ANQLRYPN+HT++FSF +L
Sbjct: 2196 NESKGNTRA--AFESSAHSALLEKLAKILRPEARYYLLSAMANQLRYPNSHTYFFSFAIL 2253
Query: 2318 YL----YAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRC 2373
L Y E ++ I++QI RVL ERLIV+RPHPWGL+IT EL++N Y F++ FI+
Sbjct: 2254 RLFGTDYTEQDESDIRQQIIRVLLERLIVHRPHPWGLIITLQELLQNSSYAFFHLPFIQA 2313
Query: 2374 APEI 2377
APE+
Sbjct: 2314 APEL 2317
Score = 539 (194.8 bits), Expect = 8.4e-187, Sum P(5) = 8.4e-187
Identities = 102/226 (45%), Positives = 150/226 (66%)
Query: 966 PASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYL 1025
P EVQDKI F++NN+S N++ K ++ T++LK+ ++ WFA Y+V +RA ++PNF LYL
Sbjct: 1059 PDEEVQDKILFVLNNVSEQNIDEKLRDLTDVLKDPHHQWFASYLVEERAKLQPNFQQLYL 1118
Query: 1026 KFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVL 1085
LD+++ K L E+++ TY + LL SE SS ER LKNLGSWLG LTI +++ +
Sbjct: 1119 DLLDRIDDKILWVEVLRETYASTSKLLNSEATLGSSTERGHLKNLGSWLGSLTIAKDKPI 1178
Query: 1086 RAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSM 1145
+ + I K L++EAY+ + VIPFT K+L S ++PPNPW M I+ LL E+Y
Sbjct: 1179 KHKHIWFKGLLLEAYDSQRLTIVIPFTCKVLVQATKSTVFKPPNPWLMDIIALLMELYHF 1238
Query: 1146 PNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSN 1191
LK+NLKF+IEVL K+L +D K I P+ +++DR IE + +N
Sbjct: 1239 AELKLNLKFEIEVLCKDLEIDHKAIEPSVIIRDRSTTIEESLSTAN 1284
Score = 365 (133.5 bits), Expect = 8.4e-187, Sum P(5) = 8.4e-187
Identities = 94/272 (34%), Positives = 155/272 (56%)
Query: 1252 DEKLAALGISDQLPSAQGLFQASQSQS----PFSVSQLSTPIPNIGTHVIINQKLTALGL 1307
+E L+ I + L + + + S SQS S + + + +P++ +++ +++
Sbjct: 1277 EESLSTANIPEGLEAFEDMALTSISQSIRNERLSPAAILSTLPSLDKILVLPPSASSMVD 1336
Query: 1308 HLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMV 1367
+++V A++RAI EI++ +V+RSV+IA+ +T +LV KD+AME DE + +AA MV
Sbjct: 1337 SNVLRQIVHSAVERAIAEIITPVVERSVTIASISTVQLVSKDFAMELDEEKFRHAAANMV 1396
Query: 1368 ASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQA 1427
LAGSLA VTCKEPL+ S+++ +R Q + + E + + NDNLD C ++E+A
Sbjct: 1397 RQLAGSLALVTCKEPLKVSMTNYIRMIQQEYS-DQPMPEGLILMCVNDNLDAACGIVEKA 1455
Query: 1428 ATDKAIQTIDGEIAQQLSLRRKHREGVGSS-FFDPNIYAQGSMGVPEALRPKPGHLSVSQ 1486
A +K++ I+ I QL RR+HR S F DP++ G + +PE R PG L+ Q
Sbjct: 1456 AEEKSLPEIEKVIESQLEARRRHRAARPSEPFIDPSMTRWG-LFIPEPYRQTPGGLNKEQ 1514
Query: 1487 QRVYEDFVRLPWQNQSSQGSHAMSAGSLTSSG 1518
+YE+F R Q + +HA + T SG
Sbjct: 1515 LAIYEEFAR---QARGPGTTHAQNVS--TDSG 1541
Score = 300 (110.7 bits), Expect = 8.4e-187, Sum P(5) = 8.4e-187
Identities = 114/502 (22%), Positives = 220/502 (43%)
Query: 327 NWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQEP-FPLHAVCGSVWKNTEGQLSFLRY 385
NW + + D EG + + + ++ A ++ + + G W++ + Q+SFL
Sbjct: 504 NWSLIFRHFDREGLRLDARQFAKLYAALSPIAAEDSTLDVQQLWGGEWEHRDTQMSFLTA 563
Query: 386 AVASPPEVFTFAHSARQLP---YVDAVPGLKLQSGQAN----HAWXXXXXXXXXXXXSEM 438
+ S + + P + D ++LQ +A + S+
Sbjct: 564 FINSRTDASQIPNLRATFPHDFFSDGPEPVRLQGERAAKSPLRSLDATRAIFDLALYSQA 623
Query: 439 GHASFARSMLEYPLKQ--CPEMLLLGMAHINTAYNLIQYEV---SFAVFPMIIKSTMSNG 493
A+ ML + Q P L +A + + +Q + AVF I+K
Sbjct: 624 AWAAAESQMLIKAVVQYDLPVFLCSALA-LPQPWTSVQQSFLLRTLAVF--IMKQEEGYQ 680
Query: 494 MILH-IWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVI 552
+ LH W + V +P T I E E L +L + A+ LA
Sbjct: 681 LALHGAWRQDKQWVADQLFAMFTQDPTSTAAIYEHAIEYNWLEYLLGYT-NGLAMDLACY 739
Query: 553 ASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHH-SGALLNLYM 611
A +K +LE+W+ N ++ K + L K ++ + Q + +++L +
Sbjct: 740 AHRKGPFELEQWVR-NAAS-KGLMDMGTL-LSKYLRIKADDELRVQRREQLAPQMVSLSV 796
Query: 612 EKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQN-GEA----ADSSTSEGYA 666
+ + +L +L+ ++G + + Q + + + PRL N GE D++ G A
Sbjct: 797 KTVFTLLSVLEEYVGD------PQNLTPVQRICIQTYPRLINYGEGFDDIIDANGESGNA 850
Query: 667 --DDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFP 724
+ ++ + F +M+ +L++ +++++ ++K S E +F CM+ L +EY +
Sbjct: 851 LPEPVDKKMQELFGKMYHEELSLREILELMRQYKSSRDPAEQDLFACMVHGLIDEYHCYH 910
Query: 725 KYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRK-PADSKMFVFGTKALEQFV 783
+YP L AV+FG II +LV +TL + L +L+A+R+ M+ FG +A+EQ +
Sbjct: 911 EYPLEALTKTAVMFGGIINFRLVDGITLKVGLGMILEAVREHDIHDPMYKFGVEAIEQLI 970
Query: 784 DRLIEWPQYCNHILQISHLRST 805
+RL EW +C+ +LQI L+ +
Sbjct: 971 NRLPEWVGFCHLLLQIPSLQGS 992
Score = 122 (48.0 bits), Expect = 8.4e-187, Sum P(5) = 8.4e-187
Identities = 47/192 (24%), Positives = 89/192 (46%)
Query: 1632 SSILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQ------GVISEVPEIILRCISR 1685
SS L L+T++ D+ + L N A E V+ V+ E + + ++
Sbjct: 1589 SSQLNGFLETQNPRDRVESLVSDLQQAARN-ATEEHVKDLGRDSAVLQEYNQALRSIVAS 1647
Query: 1686 ---DEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTSWVIYS--DE 1740
+E A A K LY + L + +LA + D+ LV + +W + + D+
Sbjct: 1648 PNGEEVARLTALKACTSLYSQTKSTLEIEVLVHLLAKLCDMSALVARY--TWTVLAEVDD 1705
Query: 1741 ERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLL-QTLVTDESRVVI 1799
E FN +T+ LI + LL++ ++ +++LI +N AA + L+ Q L +E +
Sbjct: 1706 EHMFNVPVTVALIDAGLLDIRRVDMILSRLILQ-KNAAALDVLAELMDQILFNEEPSALR 1764
Query: 1800 SELHNLVDALAK 1811
S+ ++A++K
Sbjct: 1765 SDFSGSLEAMSK 1776
Score = 76 (31.8 bits), Expect = 8.1e-80, Sum P(4) = 8.1e-80
Identities = 35/100 (35%), Positives = 46/100 (46%)
Query: 1470 GVPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQG--SHAMSAGSLTSSGDAAQASAYG 1527
GVP PG + S Q + LP Q+ SS +H S+GS +S + A G
Sbjct: 99 GVPSPAST-PGPFA-SYQSGSQQPQSLPSQSLSSPKIRAHTPSSGSHLASAAGSVAGGGG 156
Query: 1528 LAGGQGNQGYSSSAGSTGFDAVSRPSDVASGTTESTSAGF 1567
GG G G SS G+T F S + SGTT ++ GF
Sbjct: 157 SGGGGGGTG--SSRGAT-F------SPLLSGTTVNSPTGF 187
Score = 65 (27.9 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 42/182 (23%), Positives = 76/182 (41%)
Query: 1499 QNQSSQGSHAMSAGS-LTSSGDAAQASAYGLAGGQGNQGYSSSAGS-TGFDAVSR-PSDV 1555
Q QS+ +S S LTSS A +S+ G G+G +S+ G + + S+ P +
Sbjct: 64 QPQSNSPGPGVSTSSPLTSSFSAVLSSSRGHPLGRGVPSPASTPGPFASYQSGSQQPQSL 123
Query: 1556 ASGTTESTSA-GFLSTSLVHIGAADGGILHNSES--------ESVNAAFTPAATELYAAD 1606
S + S +S H+ +A G + S S A F+P +
Sbjct: 124 PSQSLSSPKIRAHTPSSGSHLASAAGSVAGGGGSGGGGGGTGSSRGATFSPLLSGTTVNS 183
Query: 1607 STE-PVKEPGA-SSQSLPSTAAPERIGSS-ILEPSLQTRDALDKYHIVAQKLDALIGNDA 1663
T P +PG+ ++ S+ A I +L S+ ++ +K+ A ++ L+ ++
Sbjct: 184 PTGFPPDKPGSVAAHGSQSSLAKISIAQVFLLLDSITEKEGREKWETKAAQIHKLVESNG 243
Query: 1664 RE 1665
E
Sbjct: 244 ME 245
Score = 55 (24.4 bits), Expect = 4.4e-161, Sum P(5) = 4.4e-161
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 872 SESVVDDRHKVSAASSSDMKPLLSSIGQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGF 931
S+S V R ++ +++ P +S GQP S +P S++ L ++ SA +LS S G
Sbjct: 39 SQSSV--RRGLTPLATNLSNPSVSGRGQPQSNSPGPGVSTSSPLTSSFSA--VLSSSRGH 94
Query: 932 ARPSRGVTS 940
RGV S
Sbjct: 95 PL-GRGVPS 102
Score = 50 (22.7 bits), Expect = 6.4e-77, Sum P(3) = 6.4e-77
Identities = 22/73 (30%), Positives = 30/73 (41%)
Query: 1226 PNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLP-SAQGLFQASQS--QSPFSV 1282
P S P +S ++PL S ++ + LG P S G F + QS Q P S+
Sbjct: 65 PQSNSPGPGVST-SSPLTSSFSAVLSSSRGHPLGRGVPSPASTPGPFASYQSGSQQPQSL 123
Query: 1283 SQLSTPIPNIGTH 1295
S P I H
Sbjct: 124 PSQSLSSPKIRAH 136
Score = 48 (22.0 bits), Expect = 2.8e-146, Sum P(4) = 2.8e-146
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 1324 KEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAA-HLMVASLAGS-LAHVTCKE 1381
++ V +V A T+E V KD +S + YN A +VAS G +A +T +
Sbjct: 1602 RDRVESLVSDLQQAARNATEEHV-KDLGRDSAVLQEYNQALRSIVASPNGEEVARLTALK 1660
Query: 1382 PLRGSISSQLRNSLQ 1396
S+ SQ +++L+
Sbjct: 1661 ACT-SLYSQTKSTLE 1674
Score = 45 (20.9 bits), Expect = 1.1e-107, Sum P(5) = 1.1e-107
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 8 VPSQIRFLLQSLNEANADSVFRELCQFIE 36
V +I F+L +++E N D R+L ++
Sbjct: 1063 VQDKILFVLNNVSEQNIDEKLRDLTDVLK 1091
Score = 44 (20.5 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 2208 SFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSL 2267
S L L + L+LPPS ++ + +++S V +AI ++ T T + S
Sbjct: 1316 STLPSLDKILVLPPSASSMVDSNVLRQIVHSAV----ERAIAEIITPVVERSVTIASIS- 1370
Query: 2268 TAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLR 2303
T LVS + +LD E F +AAAN +R
Sbjct: 1371 TVQLVS------KDFAMELDEEK---FRHAAANMVR 1397
Score = 42 (19.8 bits), Expect = 1.0e-159, Sum P(5) = 1.0e-159
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 884 AASSSDMKPLLS--SIGQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGF 931
++ + PLLS ++ P+ P D + H + S+ A +SI+ F
Sbjct: 166 SSRGATFSPLLSGTTVNSPTGFPP--DKPGSVAAHGSQSSLAKISIAQVF 213
Score = 42 (19.8 bits), Expect = 1.1e-108, Sum P(4) = 1.1e-108
Identities = 25/114 (21%), Positives = 52/114 (45%)
Query: 155 EQIQNIIMFLQRSSDLSKHVDSLMQILSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLF 214
E++Q+ I+F+ + +++D ++ L+ + H Q+ + ++ + + + L L
Sbjct: 1061 EEVQDKILFVLNNVS-EQNIDEKLRDLTDVLKDPHHQWFASYLVEERAKLQPNFQQLYL- 1118
Query: 215 HECRDDDFDDIL-AEMEKEM--SMGDVMN-ELGYGCSADASQCKEILSLFTPLT 264
+ D D IL E+ +E S ++N E G S + K + S LT
Sbjct: 1119 -DLLDRIDDKILWVEVLRETYASTSKLLNSEATLGSSTERGHLKNLGSWLGSLT 1171
Score = 41 (19.5 bits), Expect = 1.3e-159, Sum P(5) = 1.3e-159
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 877 DDRHKVSAASSSDMKPLLSSIGQPSSVA 904
D R K A ++ + P L S+ PS +
Sbjct: 341 DLRVKADAILANSITPFLQSLASPSDAS 368
Score = 41 (19.5 bits), Expect = 1.4e-108, Sum P(4) = 1.4e-108
Identities = 28/106 (26%), Positives = 39/106 (36%)
Query: 1168 KDITPTSL-LKDRKREIEGNPDFSNKDVGASQPQ-LVPEVKPAIVSPLGHVDLPLDVASP 1225
+ +TP + L + G P ++ G S L + S GH L V SP
Sbjct: 45 RGLTPLATNLSNPSVSGRGQPQSNSPGPGVSTSSPLTSSFSAVLSSSRGH-PLGRGVPSP 103
Query: 1226 PNSGGP-THLLSQYAAPLRLSSGTLMEDEKLAALGIS-DQLPSAQG 1269
++ GP S P L S +L + A S L SA G
Sbjct: 104 ASTPGPFASYQSGSQQPQSLPSQSLSSPKIRAHTPSSGSHLASAAG 149
Score = 40 (19.1 bits), Expect = 3.1e-68, Sum P(4) = 3.1e-68
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 1371 AGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQ 1407
A +A T LR I + + N+LQ ++ +++Q
Sbjct: 2118 APRIAGDTAGPLLRAGIKNVIDNALQSNNVSDSVIQQ 2154
Score = 39 (18.8 bits), Expect = 1.1e-107, Sum P(5) = 1.1e-107
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 647 STPRLQNGEAA-DSSTSEGYADDI 669
ST +L N EA SST G+ ++
Sbjct: 1140 STSKLLNSEATLGSSTERGHLKNL 1163
Score = 38 (18.4 bits), Expect = 1.2e-75, Sum P(3) = 1.2e-75
Identities = 25/80 (31%), Positives = 36/80 (45%)
Query: 1550 SRPSDVASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTE 1609
S S +ASGT +S+S + G S+S SV TP AT L + S
Sbjct: 9 SSQSSIASGTDKSSSTRPTRSQQSPWGPPV------SQS-SVRRGLTPLATNL-SNPSVS 60
Query: 1610 PVKEPGASSQSLP--STAAP 1627
+P ++S P ST++P
Sbjct: 61 GRGQPQSNSPG-PGVSTSSP 79
Score = 37 (18.1 bits), Expect = 4.0e-145, Sum P(4) = 4.0e-145
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 1231 PTHLLSQYAAPLRLSSGTLMEDEKLA 1256
P+ L S ++ L S L ED LA
Sbjct: 1760 PSALRSDFSGSLEAMSKWLAEDSGLA 1785
Score = 37 (18.1 bits), Expect = 9.2e-70, Sum P(3) = 9.2e-70
Identities = 11/55 (20%), Positives = 23/55 (41%)
Query: 1838 RQSKDKKAYSHTTANREDYNIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDA 1892
R ++ + + + R IPE P G ++ ++ E+ + PG+ A
Sbjct: 1479 RAARPSEPFIDPSMTRWGLFIPEPYRQTPGGLNKEQLAIYEEFARQARGPGTTHA 1533
>GENEDB_PFALCIPARUM|PF11_0049 [details] [associations]
symbol:PF11_0049 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014186 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 RefSeq:XP_001347725.1
ProteinModelPortal:Q8IIW4 IntAct:Q8IIW4 MINT:MINT-1629072
EnsemblProtists:PF11_0049:mRNA GeneID:810602 KEGG:pfa:PF11_0049
EuPathDB:PlasmoDB:PF3D7_1103800 HOGENOM:HOG000282195 Uniprot:Q8IIW4
Length = 3371
Score = 968 (345.8 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 192/437 (43%), Positives = 286/437 (65%)
Query: 1953 IDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFIN 2012
ID AK+++ ++K ++Q S L K++ + + I+ ++ + K++FN RPY+RLF++
Sbjct: 2642 IDALAKMIICMMKLIDIQQ-ISPFVLFQKVMNIFCRIIVYESRKNKSNFNQRPYYRLFLS 2700
Query: 2013 WLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNG 2072
L++++ + + + + AF +L P++VPAF FAWLEL+SH+ F+P++L
Sbjct: 2701 ILIEINKYEKSFEDIYNKFILAFGYYLCILNPIRVPAFVFAWLELISHKLFLPEIL--KS 2758
Query: 2073 QKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTF 2132
KGW +LL+ LL+FL FL+N L ++ LY+GTLR LL+LLHDFPEFLC Y+F+F
Sbjct: 2759 SKGWYIYNKLLIYLLEFLYIFLKNNYLTDSIKILYRGTLRTLLILLHDFPEFLCVYNFSF 2818
Query: 2133 CDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQM 2192
C+VIP +C+Q+RN+ILSAFPRN++LP P PNLKID LPEI+ PP I + L +
Sbjct: 2819 CNVIPLNCVQLRNLILSAFPRNIKLPHPFNPNLKIDELPEIKIPPVILNNFTFILIDYNI 2878
Query: 2193 RADVDDYLKTGQPGSSFLSELKQKLLLPPS-EAASAGTRYNVPLINSLVLYVGMQAIHQL 2251
+ D+++Y + +L ++ +KL++ +A T+YNV LIN++VLY+GM +
Sbjct: 2879 KKDINNYFL--KRNIIYLQKIHKKLIIKNKMKALYLKTKYNVSLINAVVLYIGMSLPSSI 2936
Query: 2252 QTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHY 2311
+ +QS A++I L D EGR+ ++ AN LRYPN+HTHY
Sbjct: 2937 LIFHNSSQS------------HPAIEIILYLTYKFDMEGRHYLFSSIANHLRYPNSHTHY 2984
Query: 2312 FSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFI 2371
FS +LL+++ +N EII EQIT +L ERLIV+RPHPWGLLITFIELI+NP + FW SF+
Sbjct: 2985 FSCLLLWIFKVSNTEIINEQITGILIERLIVHRPHPWGLLITFIELIRNPIFKFWQCSFV 3044
Query: 2372 RCAPEIEKLFESVARSC 2388
PEIE +F+S+A SC
Sbjct: 3045 SVVPEIENMFQSIAHSC 3061
Score = 445 (161.7 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 95/250 (38%), Positives = 152/250 (60%)
Query: 943 FGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYY 1002
FG IE L+ A E + I P+S + ++ I N + N++ K K + ++ Y+
Sbjct: 606 FGLG-QIECLMDATELTKNII-LPSSIIIGEVFSIFNTLCLFNIDEKIKILKDFMQPDYF 663
Query: 1003 PWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSEL--IKSS 1060
W A Y+V RAS E N H+++L+F+DK++ I+ TY+ C ++L + +K
Sbjct: 664 NWLAFYIVKSRASKEVNLHNVFLEFIDKLSYPLFIDTIISMTYD-CILILFKYINELKEV 722
Query: 1061 SEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQ 1120
S R++LKNLGSWLG +T+GRN+ L+++ +D K ++ EAY+KG ++ ++P KILE +
Sbjct: 723 SAFRTVLKNLGSWLGFITLGRNRPLKSKILDLKVVLFEAYDKGCLVCILPMVCKILESIK 782
Query: 1121 SSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDI-TPTSLLKDR 1179
S ++PPNPWT AIL LL EI+ +PN+K + F++EVLFKNL +++++ T LL R
Sbjct: 783 LSKNFKPPNPWTTAILCLLTEIHELPNVKTYIIFEVEVLFKNLSLNIQEFQNKTILLSKR 842
Query: 1180 KREIEGNPDF 1189
DF
Sbjct: 843 MPPQNKKSDF 852
Score = 341 (125.1 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 75/165 (45%), Positives = 111/165 (67%)
Query: 1289 IPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLK 1348
+ ++G VII+ + + +RVVP+A+DRAI+EI++ I++RSVSI TT+E++ K
Sbjct: 1061 LQSLGNAVIISPSIALFQIQPTLKRVVPVAVDRAIREIIASILERSVSICCVTTREIICK 1120
Query: 1349 DYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIAS----EL 1404
D+ +E++E I AAH+MVASLA SLA TCKEPLR S++ LR LQ + L
Sbjct: 1121 DFCLETNEYLIRKAAHIMVASLASSLALATCKEPLRISLTQHLRQLLQPTSTKDCNDQVL 1180
Query: 1405 LEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRK 1449
+EQ VQ++ DNL+LGC +IEQA +KAI+ I+ E + L L ++
Sbjct: 1181 IEQVVQILCADNLELGCNLIEQAVIEKAIKDIN-ESLEPLFLTKE 1224
Score = 276 (102.2 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 60/161 (37%), Positives = 97/161 (60%)
Query: 670 EAEANSYFHQMFSGQLTIEAMVQMLARFKESSV-KREHSIFECMIGNLFEEYRFFPKYPE 728
EAE N+YF ++++G +T+ M+ +L S + + +++CM+ LF E +FFPKYP
Sbjct: 20 EAEVNNYFAKLYTGDITVNTMLDILKGLSSSPKGSKNNDVYKCMLLVLFNECKFFPKYPP 79
Query: 729 RQLRIAAVLFGSIIKHQLVTHL--TLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRL 786
+L I A LFG +IK+ L+ +L IAL +L+A+RK D KMF FG ALEQF + L
Sbjct: 80 EELDITAKLFGKLIKNNLLMDYGNSLNIALMCILEAIRKENDIKMFNFGITALEQFEEYL 139
Query: 787 IEWPQYCNHILQISHLRSTHAELVAFIERALARISSGHLES 827
+ +P + + +L +++LR + + V L+ I H+ S
Sbjct: 140 LCYPSFLSSLLTMNNLRKYNPQYVTHYNDLLS-ILPEHIRS 179
Score = 76 (31.8 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 1743 KFNRDITMGLIRSELLNLAEYNVHMAK-LIDGGRNKA-ATEFAISLLQTLVTDESRVVIS 1800
K+N ++T GLIR L+++ +Y ++ K LI+ N EF I L + ++ D +
Sbjct: 1605 KYNVNVTAGLIRYNLIDIEKYKKYLEKELINNKENFTNLIEFVILLFKNILIDFHIYRYN 1664
Query: 1801 ELHNLVDALAK 1811
+ N+ + K
Sbjct: 1665 DFQNIFSLINK 1675
Score = 53 (23.7 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 1871 EQVSMLFAEWYQICELPGSNDA--ACTRYVLQLHQNGLLKGDDMTDRFF 1917
E +S F +W ++ L ++ + ++ + GLLK D D FF
Sbjct: 2133 EIISFAFNQWVKLTSLNNIDNPNESYMKFFQSISNQGLLKIDSNIDNFF 2181
Score = 49 (22.3 bits), Expect = 2.8e-88, Sum P(6) = 2.8e-88
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 2295 LNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQ 2331
LN A +++ NN T YFS V+ + N+E QE+
Sbjct: 1709 LNVEAQKIK-ENNETVYFSDVMQFCVEYFNKE--QEE 1742
Score = 47 (21.6 bits), Expect = 1.3e-162, Sum P(7) = 1.3e-162
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 74 KYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERI 115
+Y++ P+F + + + N Q + + +D+L++ LPE I
Sbjct: 137 EYLLCYPSFLSSLLTMNNLRKYNPQYVTHYNDLLSI-LPEHI 177
Score = 45 (20.9 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 977 IINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFL 1028
++N + V K + + YY F ++ + E +F D+Y KF+
Sbjct: 2670 VMNIFCRIIVYESRKNKSNFNQRPYYRLFLSILI-EINKYEKSFEDIYNKFI 2720
Score = 43 (20.2 bits), Expect = 6.5e-89, Sum P(4) = 6.5e-89
Identities = 25/129 (19%), Positives = 52/129 (40%)
Query: 547 IRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGAL 606
I ++ ++KE +D++K L + +K E + K+ + S + ++SG +
Sbjct: 1907 INESINKNKKEEIDIKKSLDNHSENFKRECSESLINTNKDQPCDIASQESNELINNSG-I 1965
Query: 607 LNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYA 666
+K K L + E+I++ + +D + + E T+E
Sbjct: 1966 KKKNTKKKEKKNKKLNEECKENMDEESKEKIDEEKKEKIDEEKKEKIDEEKKEKTNEEKK 2025
Query: 667 DDIEAEANS 675
D I E N+
Sbjct: 2026 DKINEEKNN 2034
Score = 40 (19.1 bits), Expect = 7.8e-114, Sum P(6) = 7.8e-114
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 1347 LKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLE 1406
+ Y + D N + +V L G L + + L SI++ + N Q + S+ +
Sbjct: 298 MNGYDINHDNINKRNNSINVVNVLDGILNNNINNDNLLSSINNMVPNYQQQVPNFSQHIN 357
Query: 1407 QAVQLVTNDNLDL 1419
+ NDN+ L
Sbjct: 358 NDISSNINDNIIL 370
Score = 40 (19.1 bits), Expect = 7.4e-113, Sum P(3) = 7.4e-113
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 971 QDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDK 1030
+ KI F + L V + ++ T +E F Q++ + + N ++ Y+KF
Sbjct: 2106 KSKI-FKDKGVGGLRVVPRPQQVTNEHEEIISFAFNQWVKLTSLNNIDNPNESYMKFFQS 2164
Query: 1031 VNSKAL 1036
++++ L
Sbjct: 2165 ISNQGL 2170
Score = 40 (19.1 bits), Expect = 5.2e-90, Sum P(2) = 5.2e-90
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 97 EQLLENLSDVLNLSLPERIGIGLALSDSEN 126
E++L+NL+ +N S IG+ + D +N
Sbjct: 2420 EEILKNLTSAINQS------IGINIDDIQN 2443
Score = 39 (18.8 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 1665 EAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYE 1702
+ + +I +PEI ++ E ++ K++ L E
Sbjct: 1452 DGNIFNLIKSIPEIAALTKNKYETIISYTNKIYTFLLE 1489
Score = 39 (18.8 bits), Expect = 7.7e-184, Sum P(6) = 7.7e-184
Identities = 6/18 (33%), Positives = 14/18 (77%)
Query: 1638 SLQTRDALDKYHIVAQKL 1655
++ ++A+DK ++ AQK+
Sbjct: 1699 NVNIKEAIDKLNVEAQKI 1716
Score = 38 (18.4 bits), Expect = 1.1e-161, Sum P(7) = 1.1e-161
Identities = 12/59 (20%), Positives = 26/59 (44%)
Query: 790 PQYCNHILQISHLRSTHAELVAFIERALA-RISSGHLESDGASNPAAH--QHVSSQATS 845
PQY H + + H + +IE ++ +I + + NP + Q ++ + T+
Sbjct: 160 PQYVTHYNDLLSILPEHIRSMPYIEPSIIIKIKQLYSMNTNKVNPTINNMQLINDEHTN 218
Score = 38 (18.4 bits), Expect = 1.3e-113, Sum P(6) = 1.3e-113
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 1289 IPNIGTHVIINQKLTALGLHLHFQ 1312
+PN+ T++I ++ L L+ Q
Sbjct: 807 LPNVKTYIIFEVEVLFKNLSLNIQ 830
>UNIPROTKB|Q8IIW4 [details] [associations]
symbol:PF11_0049 "NOT family protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014186 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 RefSeq:XP_001347725.1
ProteinModelPortal:Q8IIW4 IntAct:Q8IIW4 MINT:MINT-1629072
EnsemblProtists:PF11_0049:mRNA GeneID:810602 KEGG:pfa:PF11_0049
EuPathDB:PlasmoDB:PF3D7_1103800 HOGENOM:HOG000282195 Uniprot:Q8IIW4
Length = 3371
Score = 968 (345.8 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 192/437 (43%), Positives = 286/437 (65%)
Query: 1953 IDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFIN 2012
ID AK+++ ++K ++Q S L K++ + + I+ ++ + K++FN RPY+RLF++
Sbjct: 2642 IDALAKMIICMMKLIDIQQ-ISPFVLFQKVMNIFCRIIVYESRKNKSNFNQRPYYRLFLS 2700
Query: 2013 WLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNG 2072
L++++ + + + + AF +L P++VPAF FAWLEL+SH+ F+P++L
Sbjct: 2701 ILIEINKYEKSFEDIYNKFILAFGYYLCILNPIRVPAFVFAWLELISHKLFLPEIL--KS 2758
Query: 2073 QKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTF 2132
KGW +LL+ LL+FL FL+N L ++ LY+GTLR LL+LLHDFPEFLC Y+F+F
Sbjct: 2759 SKGWYIYNKLLIYLLEFLYIFLKNNYLTDSIKILYRGTLRTLLILLHDFPEFLCVYNFSF 2818
Query: 2133 CDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQM 2192
C+VIP +C+Q+RN+ILSAFPRN++LP P PNLKID LPEI+ PP I + L +
Sbjct: 2819 CNVIPLNCVQLRNLILSAFPRNIKLPHPFNPNLKIDELPEIKIPPVILNNFTFILIDYNI 2878
Query: 2193 RADVDDYLKTGQPGSSFLSELKQKLLLPPS-EAASAGTRYNVPLINSLVLYVGMQAIHQL 2251
+ D+++Y + +L ++ +KL++ +A T+YNV LIN++VLY+GM +
Sbjct: 2879 KKDINNYFL--KRNIIYLQKIHKKLIIKNKMKALYLKTKYNVSLINAVVLYIGMSLPSSI 2936
Query: 2252 QTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHY 2311
+ +QS A++I L D EGR+ ++ AN LRYPN+HTHY
Sbjct: 2937 LIFHNSSQS------------HPAIEIILYLTYKFDMEGRHYLFSSIANHLRYPNSHTHY 2984
Query: 2312 FSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFI 2371
FS +LL+++ +N EII EQIT +L ERLIV+RPHPWGLLITFIELI+NP + FW SF+
Sbjct: 2985 FSCLLLWIFKVSNTEIINEQITGILIERLIVHRPHPWGLLITFIELIRNPIFKFWQCSFV 3044
Query: 2372 RCAPEIEKLFESVARSC 2388
PEIE +F+S+A SC
Sbjct: 3045 SVVPEIENMFQSIAHSC 3061
Score = 445 (161.7 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 95/250 (38%), Positives = 152/250 (60%)
Query: 943 FGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYY 1002
FG IE L+ A E + I P+S + ++ I N + N++ K K + ++ Y+
Sbjct: 606 FGLG-QIECLMDATELTKNII-LPSSIIIGEVFSIFNTLCLFNIDEKIKILKDFMQPDYF 663
Query: 1003 PWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSEL--IKSS 1060
W A Y+V RAS E N H+++L+F+DK++ I+ TY+ C ++L + +K
Sbjct: 664 NWLAFYIVKSRASKEVNLHNVFLEFIDKLSYPLFIDTIISMTYD-CILILFKYINELKEV 722
Query: 1061 SEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQ 1120
S R++LKNLGSWLG +T+GRN+ L+++ +D K ++ EAY+KG ++ ++P KILE +
Sbjct: 723 SAFRTVLKNLGSWLGFITLGRNRPLKSKILDLKVVLFEAYDKGCLVCILPMVCKILESIK 782
Query: 1121 SSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDI-TPTSLLKDR 1179
S ++PPNPWT AIL LL EI+ +PN+K + F++EVLFKNL +++++ T LL R
Sbjct: 783 LSKNFKPPNPWTTAILCLLTEIHELPNVKTYIIFEVEVLFKNLSLNIQEFQNKTILLSKR 842
Query: 1180 KREIEGNPDF 1189
DF
Sbjct: 843 MPPQNKKSDF 852
Score = 341 (125.1 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 75/165 (45%), Positives = 111/165 (67%)
Query: 1289 IPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLK 1348
+ ++G VII+ + + +RVVP+A+DRAI+EI++ I++RSVSI TT+E++ K
Sbjct: 1061 LQSLGNAVIISPSIALFQIQPTLKRVVPVAVDRAIREIIASILERSVSICCVTTREIICK 1120
Query: 1349 DYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIAS----EL 1404
D+ +E++E I AAH+MVASLA SLA TCKEPLR S++ LR LQ + L
Sbjct: 1121 DFCLETNEYLIRKAAHIMVASLASSLALATCKEPLRISLTQHLRQLLQPTSTKDCNDQVL 1180
Query: 1405 LEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRK 1449
+EQ VQ++ DNL+LGC +IEQA +KAI+ I+ E + L L ++
Sbjct: 1181 IEQVVQILCADNLELGCNLIEQAVIEKAIKDIN-ESLEPLFLTKE 1224
Score = 276 (102.2 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 60/161 (37%), Positives = 97/161 (60%)
Query: 670 EAEANSYFHQMFSGQLTIEAMVQMLARFKESSV-KREHSIFECMIGNLFEEYRFFPKYPE 728
EAE N+YF ++++G +T+ M+ +L S + + +++CM+ LF E +FFPKYP
Sbjct: 20 EAEVNNYFAKLYTGDITVNTMLDILKGLSSSPKGSKNNDVYKCMLLVLFNECKFFPKYPP 79
Query: 729 RQLRIAAVLFGSIIKHQLVTHL--TLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRL 786
+L I A LFG +IK+ L+ +L IAL +L+A+RK D KMF FG ALEQF + L
Sbjct: 80 EELDITAKLFGKLIKNNLLMDYGNSLNIALMCILEAIRKENDIKMFNFGITALEQFEEYL 139
Query: 787 IEWPQYCNHILQISHLRSTHAELVAFIERALARISSGHLES 827
+ +P + + +L +++LR + + V L+ I H+ S
Sbjct: 140 LCYPSFLSSLLTMNNLRKYNPQYVTHYNDLLS-ILPEHIRS 179
Score = 76 (31.8 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 1743 KFNRDITMGLIRSELLNLAEYNVHMAK-LIDGGRNKA-ATEFAISLLQTLVTDESRVVIS 1800
K+N ++T GLIR L+++ +Y ++ K LI+ N EF I L + ++ D +
Sbjct: 1605 KYNVNVTAGLIRYNLIDIEKYKKYLEKELINNKENFTNLIEFVILLFKNILIDFHIYRYN 1664
Query: 1801 ELHNLVDALAK 1811
+ N+ + K
Sbjct: 1665 DFQNIFSLINK 1675
Score = 53 (23.7 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 1871 EQVSMLFAEWYQICELPGSNDA--ACTRYVLQLHQNGLLKGDDMTDRFF 1917
E +S F +W ++ L ++ + ++ + GLLK D D FF
Sbjct: 2133 EIISFAFNQWVKLTSLNNIDNPNESYMKFFQSISNQGLLKIDSNIDNFF 2181
Score = 49 (22.3 bits), Expect = 2.8e-88, Sum P(6) = 2.8e-88
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 2295 LNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQ 2331
LN A +++ NN T YFS V+ + N+E QE+
Sbjct: 1709 LNVEAQKIK-ENNETVYFSDVMQFCVEYFNKE--QEE 1742
Score = 47 (21.6 bits), Expect = 1.3e-162, Sum P(7) = 1.3e-162
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 74 KYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERI 115
+Y++ P+F + + + N Q + + +D+L++ LPE I
Sbjct: 137 EYLLCYPSFLSSLLTMNNLRKYNPQYVTHYNDLLSI-LPEHI 177
Score = 45 (20.9 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 977 IINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFL 1028
++N + V K + + YY F ++ + E +F D+Y KF+
Sbjct: 2670 VMNIFCRIIVYESRKNKSNFNQRPYYRLFLSILI-EINKYEKSFEDIYNKFI 2720
Score = 43 (20.2 bits), Expect = 6.5e-89, Sum P(4) = 6.5e-89
Identities = 25/129 (19%), Positives = 52/129 (40%)
Query: 547 IRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGAL 606
I ++ ++KE +D++K L + +K E + K+ + S + ++SG +
Sbjct: 1907 INESINKNKKEEIDIKKSLDNHSENFKRECSESLINTNKDQPCDIASQESNELINNSG-I 1965
Query: 607 LNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYA 666
+K K L + E+I++ + +D + + E T+E
Sbjct: 1966 KKKNTKKKEKKNKKLNEECKENMDEESKEKIDEEKKEKIDEEKKEKIDEEKKEKTNEEKK 2025
Query: 667 DDIEAEANS 675
D I E N+
Sbjct: 2026 DKINEEKNN 2034
Score = 40 (19.1 bits), Expect = 7.8e-114, Sum P(6) = 7.8e-114
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 1347 LKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLE 1406
+ Y + D N + +V L G L + + L SI++ + N Q + S+ +
Sbjct: 298 MNGYDINHDNINKRNNSINVVNVLDGILNNNINNDNLLSSINNMVPNYQQQVPNFSQHIN 357
Query: 1407 QAVQLVTNDNLDL 1419
+ NDN+ L
Sbjct: 358 NDISSNINDNIIL 370
Score = 40 (19.1 bits), Expect = 7.4e-113, Sum P(3) = 7.4e-113
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 971 QDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDK 1030
+ KI F + L V + ++ T +E F Q++ + + N ++ Y+KF
Sbjct: 2106 KSKI-FKDKGVGGLRVVPRPQQVTNEHEEIISFAFNQWVKLTSLNNIDNPNESYMKFFQS 2164
Query: 1031 VNSKAL 1036
++++ L
Sbjct: 2165 ISNQGL 2170
Score = 40 (19.1 bits), Expect = 5.2e-90, Sum P(2) = 5.2e-90
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 97 EQLLENLSDVLNLSLPERIGIGLALSDSEN 126
E++L+NL+ +N S IG+ + D +N
Sbjct: 2420 EEILKNLTSAINQS------IGINIDDIQN 2443
Score = 39 (18.8 bits), Expect = 1.5e-186, Sum P(7) = 1.5e-186
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 1665 EAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYE 1702
+ + +I +PEI ++ E ++ K++ L E
Sbjct: 1452 DGNIFNLIKSIPEIAALTKNKYETIISYTNKIYTFLLE 1489
Score = 39 (18.8 bits), Expect = 7.7e-184, Sum P(6) = 7.7e-184
Identities = 6/18 (33%), Positives = 14/18 (77%)
Query: 1638 SLQTRDALDKYHIVAQKL 1655
++ ++A+DK ++ AQK+
Sbjct: 1699 NVNIKEAIDKLNVEAQKI 1716
Score = 38 (18.4 bits), Expect = 1.1e-161, Sum P(7) = 1.1e-161
Identities = 12/59 (20%), Positives = 26/59 (44%)
Query: 790 PQYCNHILQISHLRSTHAELVAFIERALA-RISSGHLESDGASNPAAH--QHVSSQATS 845
PQY H + + H + +IE ++ +I + + NP + Q ++ + T+
Sbjct: 160 PQYVTHYNDLLSILPEHIRSMPYIEPSIIIKIKQLYSMNTNKVNPTINNMQLINDEHTN 218
Score = 38 (18.4 bits), Expect = 1.3e-113, Sum P(6) = 1.3e-113
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 1289 IPNIGTHVIINQKLTALGLHLHFQ 1312
+PN+ T++I ++ L L+ Q
Sbjct: 807 LPNVKTYIIFEVEVLFKNLSLNIQ 830
>POMBASE|SPAC20G8.06 [details] [associations]
symbol:not1 "CCR4-Not complex subunit Not1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006402 "mRNA catabolic process"
evidence=IC] [GO:0030015 "CCR4-NOT core complex" evidence=ISO]
PomBase:SPAC20G8.06 GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0000289 GO:GO:0030015
GO:GO:0006354 eggNOG:COG5103 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 PIR:T38128
RefSeq:NP_593323.1 ProteinModelPortal:P87112 STRING:P87112
EnsemblFungi:SPAC20G8.06.1 GeneID:2542001 KEGG:spo:SPAC20G8.06
OMA:ANIAGTR OrthoDB:EOG4SFDF0 NextBio:20803082 Uniprot:P87112
Length = 2100
Score = 654 (235.3 bits), Expect = 2.4e-152, Sum P(5) = 2.4e-152
Identities = 161/443 (36%), Positives = 241/443 (54%)
Query: 1950 FLAIDIYAKLMLSILKCCPVE-QG--SSKIFLLSKILTVTVKFILKDAEEKKASF-NPRP 2005
+ +D YA L+++++K +G SSK L KI+ + + + + A F + +
Sbjct: 1653 YFNVDAYASLLVNVVKYTEGSTEGTVSSKSVLFRKIIALIIG-VFAELHNSMAEFVHQKT 1711
Query: 2006 YFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMP 2065
+FRLF + L ++ V + I S F +QP PAF+FAWL L+SH +P
Sbjct: 1712 FFRLFSSILSELDDAKDVLESCFVDIYSVILECFLAIQPRSFPAFTFAWLSLISHSYLLP 1771
Query: 2066 KLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFL 2125
K+L+ N K +L++ L+FL+ L++ + LY G LR++LVLLHDFP FL
Sbjct: 1772 KVLLVNNDKINDLFSEILMSFLKFLD--LKDDIDKAQFKLLYNGFLRIILVLLHDFPGFL 1829
Query: 2126 CDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDA 2185
+ + IP C+Q+RN++LSAFP ++ LPDP LK+ LPE+ P I + V A
Sbjct: 1830 ATHCYQLIPYIPLECVQLRNMVLSAFPSDLHLPDPFAQGLKVGRLPEVTRAPLISNSVSA 1889
Query: 2186 ALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGM 2245
+L D++ + +P +E+ KLLL + T+ N N +L +
Sbjct: 1890 SLEKFASALDLEACFSSSKP-----AEVA-KLLLEVYSSQDTPTKLN-EWANYFMLCLIR 1942
Query: 2246 QAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYP 2305
A TR S A+ S + V I T+ + D++ RY L A ANQLRYP
Sbjct: 1943 HA-----TRDSPAKQAPQFQSKSPECV-----IISTMNRSCDSKCRYFLLTAIANQLRYP 1992
Query: 2306 NNHTHYFSFVLLYLYAEAN---QEI-IQEQITRVLFERLIVNRPHPWGLLITFIELIKNP 2361
++HT+Y S LYL+ ++ QE+ I+EQ+T VL ER+I NRPHPWGLLITF EL+KN
Sbjct: 1993 SSHTYYASCCFLYLFKSSSNNPQELLIKEQMTTVLLERIICNRPHPWGLLITFTELLKNE 2052
Query: 2362 RYNFWNQSFIRCAPEIEKLFESV 2384
YNFW +I+ EI +LF+S+
Sbjct: 2053 DYNFWKHPYIKRNDEICRLFDSL 2075
Score = 475 (172.3 bits), Expect = 2.4e-152, Sum P(5) = 2.4e-152
Identities = 175/672 (26%), Positives = 313/672 (46%)
Query: 187 KDHTQFVLNPVLPDELHDATSLRDLDLFHE-CRDDDFDDI-LAEMEKEMSMGDVMNELGY 244
K+ Q +LN + + DLDL E D+D I L ++ K D + E
Sbjct: 181 KNTFQSLLNQLSDPTQQQSIDKNDLDLLREGLFTTDYDRIPLIKVPKF----DAIIE--- 233
Query: 245 GCSADASQCKEILSLFTPL--TEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCSTMS 302
+ + + +LF P+ ++ TL + AI + + T + +A +++
Sbjct: 234 ---KKLANSRPLTALFGPMKASKATLKSMKEAILKKYP-----PGTATETDVAYLINSLV 285
Query: 303 DLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEA----FSFFMSVYKYA 358
+ +W+ ++ KAI N NW ++ D F I + F+ F + YK
Sbjct: 286 AIHDYGAWDTVLMGKAIVSSFENLNWEAMLSMFDNPKFMITGTPSLVLFFTIFTNAYKLR 345
Query: 359 CQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQ 418
Q F L + +W+N QLS + + + SP +F P V +V LK S +
Sbjct: 346 -QTNFTLDFLW-VLWRNPLPQLSIISHIILSPTSMFDI-REFNVNPVV-SVDSLKDYSEE 401
Query: 419 -ANHAWXXXXXXXXXXXXSEM------GHASFARSM-LEY-PLKQCPEMLLLGMAHINTA 469
N+A ++ ++ S+ L + K E+LLLG + A
Sbjct: 402 LVNYAKIYEKSNLNCIELVQILLRLLSEVVTYETSLFLNFLDEKVSAELLLLGTLQLPLA 461
Query: 470 YNLIQYEVSFAVFPMIIKSTMSNGMI-LHIWHVNPNIVLRGFVDAQNMEPDCTI-RILEI 527
+N +Q ++F + + + + I NP + F+ + ++ ++ +++E
Sbjct: 462 WNPVQESLAFQWCSDFFSNFKEHKFVFVRIERTNPQFLF-AFLRSLWLKDSSSVNQVVEF 520
Query: 528 CQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKD-----VFFEECLK 582
E S + + P+ FA+ +A +A+ ++ + + WL + ++D VF E L
Sbjct: 521 IIENDFTSHIGNIQPNRFALEIAALAAARKALSFQDWLDKKMLEFEDADGLNVFLVEVLD 580
Query: 583 FVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQA 642
F+ + ++ S Q +L++ + + V+L L ++ + S ++SE I+ Q
Sbjct: 581 FLMS-RAALQKNESEQK--EESVVLSI--DTVNVLLTTLMDNVSI--SEEVSEHIKDVQI 633
Query: 643 VVLDSTPRLQN-GEAADS-----STSEGYADDIEAEANSYFHQMFSGQLTIEAMVQMLAR 696
+ L PRL + G DS +T+ ++ D+E+E SYF ++ +++I +V L
Sbjct: 634 LCLQVYPRLFSLGHDRDSIVIATNTTNSFSPDVESEVESYFQALYERRISIGKIVLTLQN 693
Query: 697 FKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIAL 756
FK+S R+ +F C+ +LF+EYRFFP YP L + AVLFGS+I+ +L++ + LG+AL
Sbjct: 694 FKKSENPRDLDLFACLQHSLFDEYRFFPDYPLEALALTAVLFGSLIQFELLSFVPLGVAL 753
Query: 757 RGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERA 816
R V AL P DSKMF FG +AL QF ++L ++ YCN IL I L+ ++ I
Sbjct: 754 RYVYQALLMPTDSKMFRFGMQALVQFQEKLPKYINYCNLILGIPSLQLVRPDIYDSIREM 813
Query: 817 LARISSGHLESD 828
+A + +E D
Sbjct: 814 IASNENTEVEKD 825
Score = 445 (161.7 bits), Expect = 2.4e-152, Sum P(5) = 2.4e-152
Identities = 135/487 (27%), Positives = 237/487 (48%)
Query: 962 PIEAPASE------VQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRAS 1015
P+ P +E V D I F INN+S LN K K+ + L Y PWF+ Y+V +R S
Sbjct: 853 PLNVPNAEGEIEESVCDNILFAINNLSQLNFNEKLKDVKDNLTPAYLPWFSHYIVTQRVS 912
Query: 1016 IEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLG 1075
E NF LY KFL+++ S L + + + T + ++ + S E++ LKNLGSWLG
Sbjct: 913 REANFLSLYGKFLEELKSSDLYKIVFRDTLQAILDIMNNNAETLSPSEKTNLKNLGSWLG 972
Query: 1076 KLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAI 1135
+T+ RN+ + ++ K L++E + G + V+PF K+LE SS+ ++PPNPW M I
Sbjct: 973 SITLLRNKPITTLQVSFKDLLLEGIDSGRIDRVLPFVCKVLEKASSSVIFKPPNPWLMGI 1032
Query: 1136 LGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKD---RKREIEGN-P-DFS 1190
L LL E+Y + ++NLKF+IE+L NL V M +I P+ + ++ +K ++E P D
Sbjct: 1033 LKLLVELYQFADFRLNLKFEIELLLNNLNVKMDNIEPSEMYRNHLVQKADLEKELPEDVL 1092
Query: 1191 NKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSG--GPTHLLSQYAAPLRLSSGT 1248
N + ++ + A S + D V P T L+ Q + L + S
Sbjct: 1093 NAEF-PDGTDVITQYIVAASSQITVTDAVAQVFGKPKPAIKNITQLIIQQSV-LEIISAV 1150
Query: 1249 LMEDEKLAALGISDQLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLH 1308
+ +AA+ + L +++ S+ + Q++ + V + L L ++
Sbjct: 1151 VRRSVGIAAI-TTKSLLQKDFAAESNPSRLLLAARQMAKTLAGNLAMVTCREPLQMLMIN 1209
Query: 1309 LHFQRVVPIAMDR---AIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHL 1365
+F+ + ++ A+ + + +V +++ +A+ E V + A+ + I H+
Sbjct: 1210 -NFRTIALQDVENVHAAVAQAIDELVSQNLFVASSVI-ESVASETAIAEIDAEI---EHM 1264
Query: 1366 MVASLAG--SLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTN-DNLDLGCA 1422
+V + + ++ +P G+ + L N L ++SEL Q QL N D L L
Sbjct: 1265 IVERVRHRKTTPNLPFVDPA-GAANLHL-NLPSVLKLSSELTPQQFQLYENFDRLSLSTI 1322
Query: 1423 VIEQAAT 1429
+ + T
Sbjct: 1323 MSNNSFT 1329
Score = 445 (161.7 bits), Expect = 8.1e-121, Sum P(4) = 8.1e-121
Identities = 114/367 (31%), Positives = 184/367 (50%)
Query: 1871 EQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFR-RLTEVSVAHCL 1929
+Q+ ++F W + +ND +V QLH+ G+L ++ +FFR L V VA
Sbjct: 1585 DQIIIVFVSWVHLLRNSATNDETKAAFVYQLHKQGILSEPELCIQFFRCNLEAVLVAFLE 1644
Query: 1930 SSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVE-QG--SSKIFLLSKILTVT 1986
++ V P + +D YA L+++++K +G SSK L KI+ +
Sbjct: 1645 AASVNAPD------------YFNVDAYASLLVNVVKYTEGSTEGTVSSKSVLFRKIIALI 1692
Query: 1987 VKFILKDAEEKKASF-NPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPL 2045
+ + + A F + + +FRLF + L ++ V + I S F +QP
Sbjct: 1693 IG-VFAELHNSMAEFVHQKTFFRLFSSILSELDDAKDVLESCFVDIYSVILECFLAIQPR 1751
Query: 2046 KVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRF 2105
PAF+FAWL L+SH +PK+L+ N K +L++ L+FL+ L++ +
Sbjct: 1752 SFPAFTFAWLSLISHSYLLPKVLLVNNDKINDLFSEILMSFLKFLD--LKDDIDKAQFKL 1809
Query: 2106 LYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNL 2165
LY G LR++LVLLHDFP FL + + IP C+Q+RN++LSAFP ++ LPDP L
Sbjct: 1810 LYNGFLRIILVLLHDFPGFLATHCYQLIPYIPLECVQLRNMVLSAFPSDLHLPDPFAQGL 1869
Query: 2166 KIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAA 2225
K+ LPE+ P I + V A+L D++ + +P +E+ KLLL +
Sbjct: 1870 KVGRLPEVTRAPLISNSVSASLEKFASALDLEACFSSSKP-----AEVA-KLLLEVYSSQ 1923
Query: 2226 SAGTRYN 2232
T+ N
Sbjct: 1924 DTPTKLN 1930
Score = 287 (106.1 bits), Expect = 8.4e-136, Sum P(5) = 8.4e-136
Identities = 73/214 (34%), Positives = 116/214 (54%)
Query: 1312 QRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLA 1371
+ + + + +++ EI+S +V+RSV IA TTK L+ KD+A ES+ +R+ AA M +LA
Sbjct: 1132 KNITQLIIQQSVLEIISAVVRRSVGIAAITTKSLLQKDFAAESNPSRLLLAARQMAKTLA 1191
Query: 1372 GSLAHVTCKEPLRGSISSQLRN-SLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATD 1430
G+LA VTC+EPL+ + + R +LQ + + QA+ + + NL + +VIE A++
Sbjct: 1192 GNLAMVTCREPLQMLMINNFRTIALQDVENVHAAVAQAIDELVSQNLFVASSVIESVASE 1251
Query: 1431 KAIQTIDGEIAQQLSLRRKHREGVGS-SFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRV 1489
AI ID EI + R +HR+ + F DP A + +P L+ L+ Q ++
Sbjct: 1252 TAIAEIDAEIEHMIVERVRHRKTTPNLPFVDPAGAANLHLNLPSVLKLS-SELTPQQFQL 1310
Query: 1490 YEDFVRLPWQNQSSQGSHAMSAGSLTSSGDAAQA 1523
YE+F RL S S G T S D+ A
Sbjct: 1311 YENFDRLSLSTIMSNNSFTSLNGLRTDSADSTDA 1344
Score = 139 (54.0 bits), Expect = 2.4e-152, Sum P(5) = 2.4e-152
Identities = 56/229 (24%), Positives = 100/229 (43%)
Query: 1714 LAILAAIRD-VCKLVVKELTSWVIY---SDEERKFNRDITMGLIRSELLNLAEYNVHMAK 1769
L + +AI + +C+ K + +Y S++ K N I + LIR +L E + H+A+
Sbjct: 1440 LEVFSAILEYICQASTKTAINVSLYWNFSNDLEKLNLPIILSLIRFGILTSGEVDYHVAR 1499
Query: 1770 LIDGGRNKA-ATEFAISLLQTLVTDESRVVISELHNLVDALAKLIEIVRNPXXXXXXXXX 1828
+ + T+FAI LL+T V E+ + + N V+++ L EI +
Sbjct: 1500 GVRSEQGSGPVTDFAIELLRTAVGGENPMALPG--NFVNSITSLYEISESFSGETKQAYE 1557
Query: 1829 XXXXKDDKARQSKDKKAYSHTTANREDYNIPESVDPDPVGFPEQVSMLFAEWYQICELPG 1888
+K+ S + S N++ N +Q+ ++F W +
Sbjct: 1558 QLVETMNKS-VSPASEILSDLD-NKQQLN-------------DQIIIVFVSWVHLLRNSA 1602
Query: 1889 SNDAACTRYVLQLHQNGLLKGDDMTDRFFR-RLTEVSVAHCLSSEVINP 1936
+ND +V QLH+ G+L ++ +FFR L V VA ++ V P
Sbjct: 1603 TNDETKAAFVYQLHKQGILSEPELCIQFFRCNLEAVLVAFLEAASVNAP 1651
Score = 53 (23.7 bits), Expect = 2.4e-152, Sum P(5) = 2.4e-152
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 3 RLSSTVPSQIRFLLQSLNEANADSVFRELCQFI 35
++ S V +QI FLL +L E D+ ++ Q I
Sbjct: 38 KIESIVKAQILFLLSTLREDQYDTKLEQIRQLI 70
Score = 43 (20.2 bits), Expect = 4.7e-66, Sum P(4) = 4.7e-66
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 512 DAQNMEPDCTIRILE-ICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEK 563
D +N+ I E + Q L + SSV+E + S AI A I ++ E + +E+
Sbjct: 1218 DVENVHAAVAQAIDELVSQNLFVASSVIESVASETAI--AEIDAEIEHMIVER 1268
Score = 42 (19.8 bits), Expect = 7.8e-38, Sum P(3) = 7.8e-38
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 2079 IQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPP 2138
I R+L + + LE + P +L G L+ LLV L+ F +F + F ++
Sbjct: 1002 IDRVLPFVCKVLEKASSSVIFKPPNPWLM-GILK-LLVELYQFADFRLNLKFEIELLLNN 1059
Query: 2139 SCIQMRNIILSAFPRN 2154
++M NI S RN
Sbjct: 1060 LNVKMDNIEPSEMYRN 1075
Score = 37 (18.1 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 993 FTEILK-EQYYPWFAQYM 1009
FTE+LK E Y W Y+
Sbjct: 2045 FTELLKNEDYNFWKHPYI 2062
>SGD|S000000689 [details] [associations]
symbol:CDC39 "Component of the CCR4-NOT transcriptional
complex" species:4932 "Saccharomyces cerevisiae" [GO:0000749
"response to pheromone involved in conjugation with cellular
fusion" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IGI;IMP;IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IDA] [GO:0030015 "CCR4-NOT core
complex" evidence=IPI] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IDA;IPI] [GO:0007124 "pseudohyphal growth" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IGI;IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IPI]
[GO:0003674 "molecular_function" evidence=ND] [GO:0051726
"regulation of cell cycle" evidence=IMP] SGD:S000000689
GO:GO:0005634 GO:GO:0005737 EMBL:X59720 EMBL:BK006937 GO:GO:0000122
GO:GO:0051726 GO:GO:0006368 GO:GO:0007124 GO:GO:0032968
GO:GO:0000289 GO:GO:0030015 PDB:4B8C PDBsum:4B8C eggNOG:COG5103
KO:K12604 InterPro:IPR007196 InterPro:IPR024557 Pfam:PF12842
Pfam:PF04054 GeneTree:ENSGT00390000014869 GO:GO:0000749 EMBL:X70151
PIR:S28417 RefSeq:NP_010017.2 PDB:4B89 PDB:4B8A PDB:4B8B
PDBsum:4B89 PDBsum:4B8A PDBsum:4B8B ProteinModelPortal:P25655
DIP:DIP-1202N IntAct:P25655 MINT:MINT-383459 STRING:P25655
PaxDb:P25655 PeptideAtlas:P25655 EnsemblFungi:YCR093W GeneID:850455
KEGG:sce:YCR093W HOGENOM:HOG000057131 OMA:VIQEQIN OrthoDB:EOG43XZBJ
NextBio:966081 Genevestigator:P25655 GermOnline:YCR093W
Uniprot:P25655
Length = 2108
Score = 636 (228.9 bits), Expect = 2.0e-145, Sum P(7) = 2.0e-145
Identities = 185/642 (28%), Positives = 321/642 (50%)
Query: 1781 EFAISLLQTLVTDESRVVISELHN-LVDALAKLIEIVRNPXXXXXXXXXXXXXKDDKARQ 1839
+F + ++++L+ + + + +EL N LV A+ +E N DD
Sbjct: 1471 KFNVPVIRSLL-EVNLIDATELDNVLVTAMKNKME---NSTEFAMKLIQNTVLSDDPILM 1526
Query: 1840 SKDK-KAYSHTTANREDYNIPESVDP--DPVGFP----------EQVSMLFAEWYQICEL 1886
D K H A+ ED N+ + + D P E++ ++F EW ++ +
Sbjct: 1527 RMDFIKTLEHL-ASSEDENVKKFIKEFEDTKIMPVRKGTKTTRTEKLYLVFTEWVKLLQR 1585
Query: 1887 PGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHCLSSEVINPGTXXXXXXXX 1946
+ND T ++ QL + G++ D F + E+SV+ S+ P
Sbjct: 1586 VENNDVITTVFIKQLVEKGVISDTDNLLTFVKSSLELSVSSFKESD---P---------T 1633
Query: 1947 XXXFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPY 2006
F+AID L++ +L + + + ++ + I +V V KD ++ +FN RPY
Sbjct: 1634 DEVFIAIDALGSLIIKLLILQGFKDDTRRDYI-NAIFSVIVLVFAKDHSQEGTTFNERPY 1692
Query: 2007 FRLFINWLLDMSSLDP-----VADGSNFQIL----SAFANAF----HVLQPLKVPAFSFA 2053
FRLF N L + +++ ++D S Q L S F N F H LQP P FSFA
Sbjct: 1693 FRLFSNILYEWATIRTHNFVRISDSSTRQELIEFDSVFYNTFSGYLHALQPFAFPGFSFA 1752
Query: 2054 WLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRV 2113
W+ L+SHR +P +L + GW + L+++L +FL+ + + V +YKGTLRV
Sbjct: 1753 WVTLLSHRMLLPIMLRLPNKIGWEKLMLLIIDLFKFLDQYTSKHAVSDAVSVVYKGTLRV 1812
Query: 2114 LLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEI 2173
+L + +D P FL + H+ + +PP+ Q++N+ILSA P+NM +P+P +L ++ +P
Sbjct: 1813 ILGISNDMPSFLIENHYELMNNLPPTYFQLKNVILSAIPKNMTVPNPYDVDLNMEDIPAC 1872
Query: 2174 RDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNV 2233
++ P +F D + ++ VD+YL+ P +S L + + + G Y+
Sbjct: 1873 KELPEVF--FDPVIDLHSLKKPVDNYLRI--PSNSLLRTILSAIYKDTYDIKK-GVGYDF 1927
Query: 2234 -----PLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDT 2288
LI ++VL+VG++A + + +S+A +S T +F LIQ+
Sbjct: 1928 LSVDSKLIRAIVLHVGIEAGIEYKRTSSNAVFNTKSSYYTL--------LFN-LIQNGSI 1978
Query: 2289 EGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYA--EAN-QEI-IQEQITRVLFERLIVNR 2344
E +Y + + QLRYPN HT++FSFVL+ ++ E N Q++ +QE I R +R+IVN+
Sbjct: 1979 EMKYQIILSIVEQLRYPNIHTYWFSFVLMNMFKSDEWNDQKLEVQEIILRNFLKRIIVNK 2038
Query: 2345 PHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVAR 2386
PH WG+ + F +LI N N + F++ PEI+ + + + +
Sbjct: 2039 PHTWGVSVFFTQLINNNDINLLDLPFVQSVPEIKLILQQLVK 2080
Score = 400 (145.9 bits), Expect = 2.0e-145, Sum P(7) = 2.0e-145
Identities = 86/267 (32%), Positives = 149/267 (55%)
Query: 910 SSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASE 969
S AQ + V A + + +RP + + KF + + + +E AP +
Sbjct: 733 SQAQVYQSIVEAATLANAPKERSRPVQEMIPLKFFAVDEVSCQI----NQEG---AP-KD 784
Query: 970 VQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLD 1029
V +K+ F++NN++ N+ K E + L Y+ WF+ Y+V +RA EPN+HDLY K +
Sbjct: 785 VVEKVLFVLNNVTLANLNNKVDELKKSLTPNYFSWFSTYLVTQRAKTEPNYHDLYSKVIV 844
Query: 1030 KVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRARE 1089
+ S L++ +V T VLL ++ + ++ LKNL SWLG +T+ N+ ++ +
Sbjct: 845 AMGSGLLHQFMVNVTLRQLFVLLSTK--DEQAIDKKHLKNLASWLGCITLALNKPIKHKN 902
Query: 1090 IDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLK 1149
I + ++IEAY++ + V+PF +KIL+ S ++PPNPWT+ IL LL E+ N K
Sbjct: 903 IAFREMLIEAYKENRLEIVVPFVTKILQRASESKIFKPPNPWTVGILKLLIELNEKANWK 962
Query: 1150 MNLKFDIEVLFKNLGVDMKDITPTSLL 1176
++L F++EVL K+ + K + P++ +
Sbjct: 963 LSLTFEVEVLLKSFNLTTKSLKPSNFI 989
Score = 266 (98.7 bits), Expect = 2.0e-145, Sum P(7) = 2.0e-145
Identities = 62/187 (33%), Positives = 106/187 (56%)
Query: 1308 HLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMV 1367
H +RV +A+ ++++EI+ +V++S IA TT +++LKD+A E DE+++ AA +MV
Sbjct: 1085 HPDLKRVFQMALAKSVREILLEVVEKSSGIAVVTTTKIILKDFATEVDESKLKTAAIIMV 1144
Query: 1368 ASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQA 1427
LA SLA T EPL+ I S +++ L S + + N+N+ + +IE+A
Sbjct: 1145 RHLAQSLARATSIEPLKEGIRSTMQSLAPNLMSLSSSPAEELDTAINENIGIALVLIEKA 1204
Query: 1428 ATDKAIQTIDGEIAQQLSLRRKHREG-VGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQ 1486
+ DK+ Q + ++ Q +++RR H+E F N S+ +PE L K ++ Q
Sbjct: 1205 SMDKSTQDLADQLMQAIAIRRYHKERRADQPFITQNTNPY-SLSLPEPLGLKNTGVTPQQ 1263
Query: 1487 QRVYEDF 1493
RVYE+F
Sbjct: 1264 FRVYEEF 1270
Score = 264 (98.0 bits), Expect = 2.0e-145, Sum P(7) = 2.0e-145
Identities = 62/191 (32%), Positives = 107/191 (56%)
Query: 636 EIEKFQAV---VLDSTPRLQN-GEAADSSTSE-----GYADDIEAEANSYFHQMFSGQLT 686
++++F+++ +L + PRL N G D + G +DIE E +Y +M+SG+L
Sbjct: 555 QLQRFESLEFSLLIAFPRLINFGFGHDEAILANGDIAGINNDIEKEMQNYLQKMYSGELA 614
Query: 687 IEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQL 746
I+ ++++L R ++S + R+ +F C+ + E FF YP L +VLFGS+I QL
Sbjct: 615 IKDVIELLRRLRDSDLPRDQEVFTCITHAVIAESTFFQDYPLDALATTSVLFGSMILFQL 674
Query: 747 VTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQ-ISHLRST 805
+ L +A R ++ ++P +SKMF F +A+ F RL E+PQYC +L+ + L+S
Sbjct: 675 LRGFVLDVAFRIIMRFAKEPPESKMFKFAVQAIYAFRIRLAEYPQYCKDLLRDVPALKSQ 734
Query: 806 HAELVAFIERA 816
+ +E A
Sbjct: 735 AQVYQSIVEAA 745
Score = 128 (50.1 bits), Expect = 2.0e-145, Sum P(7) = 2.0e-145
Identities = 36/148 (24%), Positives = 77/148 (52%)
Query: 1667 EVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKL 1726
+++ +I ++ I + +D+ AL V+Q V L+ + + L +L + + +
Sbjct: 1395 QIKTIIFQILTFIAKSAQKDQLALKVSQAVVNSLFATSESPLCREVLSLLLEKLCSLSLV 1454
Query: 1727 VVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEY-NVHMAKLIDGGRNKA--ATEFA 1783
K++ W++Y+ + RKFN + L+ L++ E NV L+ +NK +TEFA
Sbjct: 1455 ARKDVVWWLVYALDSRKFNVPVIRSLLEVNLIDATELDNV----LVTAMKNKMENSTEFA 1510
Query: 1784 ISLLQ-TLVTDESRVVISELHNLVDALA 1810
+ L+Q T+++D+ ++ + ++ LA
Sbjct: 1511 MKLIQNTVLSDDPILMRMDFIKTLEHLA 1538
Score = 83 (34.3 bits), Expect = 6.2e-20, Sum P(4) = 6.2e-20
Identities = 44/159 (27%), Positives = 67/159 (42%)
Query: 2249 HQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEG---RYL-----FLNAAAN 2300
H L ++ A +G L F+V+ L L+ D + ++L +L
Sbjct: 836 HDLYSKVIVAMGSG---LLHQFMVNVTLRQLFVLLSTKDEQAIDKKHLKNLASWLGCITL 892
Query: 2301 QLRYPNNHTHY-FSFVLLYLYAEANQEIIQEQITRVL---FERLIVNRPHPW--GLLITF 2354
L P H + F +L+ Y E EI+ +T++L E I P+PW G+L
Sbjct: 893 ALNKPIKHKNIAFREMLIEAYKENRLEIVVPFVTKILQRASESKIFKPPNPWTVGILKLL 952
Query: 2355 IELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKP 2393
IEL N + N W S E+E L +S + LKP
Sbjct: 953 IEL--NEKAN-WKLSLTF---EVEVLLKSFNLTTKSLKP 985
Score = 60 (26.2 bits), Expect = 2.0e-145, Sum P(7) = 2.0e-145
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 560 DLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQ--DFSAQPFHHSGALLNLYMEKIPVI 617
+ +K I LS + D+F + K + E SQ DF +H+ L N +++ P
Sbjct: 121 EFQKQTGITLSLFIDLFDKSANKDIIESLDRSSQINDFKTIKMNHTNYLRNFFLQTTP-- 178
Query: 618 LKLLKAHIGLITSTKLSEEIEKFQAVVLDS--TPRLQN 653
+ L++++ + + E + A++L +P QN
Sbjct: 179 -ETLESNLRDLLHSLEGESLNDLLALLLSEILSPGSQN 215
Score = 55 (24.4 bits), Expect = 6.7e-145, Sum P(7) = 6.7e-145
Identities = 32/133 (24%), Positives = 58/133 (43%)
Query: 167 SSDLSKHVDSLMQILSLLQSK-DHTQFVLNPVL---PDELHDATSLRDLDLFHECRDDDF 222
+ D+ + +D QI K +HT ++ N L P+ L ++LRDL H +
Sbjct: 142 NKDIIESLDRSSQINDFKTIKMNHTNYLRNFFLQTTPETLE--SNLRDL--LHSLEGESL 197
Query: 223 DDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGL 282
+D+LA + + ++++ D ++ S TP + + IAR+ + L
Sbjct: 198 NDLLA-----LLLSEILSPGSQNLQNDPTR-----SWLTPPMVLDATNRGNVIARSISSL 247
Query: 283 EDNQ-NTFSTFTL 294
+ NQ N F L
Sbjct: 248 QANQINWNRVFNL 260
Score = 54 (24.1 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 1022 DLYLKFLDKVNSKALNREIVQATYENC-KVLLG-SELIKSSSEER--SLLKNLGSWLGKL 1077
DL+ KFLD+ SK + V Y+ +V+LG S + S E L+ NL +L
Sbjct: 1784 DLF-KFLDQYTSKHAVSDAVSVVYKGTLRVILGISNDMPSFLIENHYELMNNLPPTYFQL 1842
Query: 1078 TIGRNQVLRAREIDPKSLII-EAYEKGLMIAVIPFTSKILE 1117
+N +L A PK++ + Y+ L + IP ++ E
Sbjct: 1843 ---KNVILSAI---PKNMTVPNPYDVDLNMEDIPACKELPE 1877
Score = 49 (22.3 bits), Expect = 6.0e-109, Sum P(7) = 6.0e-109
Identities = 23/89 (25%), Positives = 49/89 (55%)
Query: 1025 LKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERS-------LLKNLGSWLGKL 1077
LK L ++N KA N ++ T+E +VLL S + + S + S +++ L LG +
Sbjct: 949 LKLLIELNEKA-NWKL-SLTFE-VEVLLKSFNLTTKSLKPSNFINTPEVIETLSGALGSI 1005
Query: 1078 TIGRNQVLRAREIDPKSLIIEAYEKGLMI 1106
T+ + Q + R+I ++++ +++ ++I
Sbjct: 1006 TLEQQQTEQQRQI----ILMQQHQQQMLI 1030
Score = 46 (21.3 bits), Expect = 2.0e-145, Sum P(7) = 2.0e-145
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 8 VPSQIRFLLQSLNEANADSVFRELCQFIE 36
V +QI L +LN N +SV RE+ ++
Sbjct: 27 VIAQISLLFTTLNNDNFESVEREIRHILD 55
Score = 46 (21.3 bits), Expect = 1.5e-122, Sum P(7) = 1.5e-122
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 1265 PSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIK 1324
P +G+ QS +P +S S+P + T IN+ + G+ L + +MD++ +
Sbjct: 1159 PLKEGIRSTMQSLAPNLMSLSSSPAEELDT--AINENI---GIALVL--IEKASMDKSTQ 1211
Query: 1325 EIVSGIVQ 1332
++ ++Q
Sbjct: 1212 DLADQLMQ 1219
Score = 44 (20.5 bits), Expect = 1.1e-85, Sum P(7) = 1.1e-85
Identities = 35/189 (18%), Positives = 76/189 (40%)
Query: 574 DVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILK-LLKAHIGLITSTK 632
DV F ++F KE + F+ Q + + + + P K LL+ L + +
Sbjct: 681 DVAFRIIMRFAKEPPESKMFKFAVQAIY----AFRIRLAEYPQYCKDLLRDVPALKSQAQ 736
Query: 633 LSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYA-DDIEAEANS-------YFHQMFS-G 683
+ + I +A L + P+ ++ + + +A D++ + N +F
Sbjct: 737 VYQSI--VEAATLANAPKERSRPVQEMIPLKFFAVDEVSCQINQEGAPKDVVEKVLFVLN 794
Query: 684 QLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIK 743
+T+ + + K+S S F + + + + P Y + ++ V GS +
Sbjct: 795 NVTLANLNNKVDELKKSLTPNYFSWFSTYL--VTQRAKTEPNYHDLYSKVI-VAMGSGLL 851
Query: 744 HQLVTHLTL 752
HQ + ++TL
Sbjct: 852 HQFMVNVTL 860
Score = 44 (20.5 bits), Expect = 2.5e-62, Sum P(4) = 2.5e-62
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 83 STVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLD 128
ST+ S + + ++ E L +N E IGI L L + ++D
Sbjct: 1166 STMQSLAPNLMSLSSSPAEELDTAIN----ENIGIALVLIEKASMD 1207
Score = 41 (19.5 bits), Expect = 2.3e-85, Sum P(7) = 2.3e-85
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 1083 QVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILE 1117
Q+ A+ + + +++E EK IAV+ T IL+
Sbjct: 1093 QMALAKSV--REILLEVVEKSSGIAVVTTTKIILK 1125
Score = 41 (19.5 bits), Expect = 5.1e-62, Sum P(4) = 5.1e-62
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 1567 FLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEPGAS 1617
FL T+ + + +LH+ E ES+N +E+ + S +P S
Sbjct: 173 FLQTTPETLESNLRDLLHSLEGESLNDLLALLLSEILSPGSQNLQNDPTRS 223
Score = 41 (19.5 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 20/93 (21%), Positives = 40/93 (43%)
Query: 954 AAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYP-----WFAQY 1008
A E + T A + + + N I ++E K + I+++ YP WF+ +
Sbjct: 1946 AGIEYKRTSSNAVFNTKSSYYTLLFNLIQNGSIEMKYQIILSIVEQLRYPNIHTYWFS-F 2004
Query: 1009 MVMKRASIEPNFHDLYLKFLDKVNSKALNREIV 1041
++M + ++D L+ + + L R IV
Sbjct: 2005 VLMNMFKSD-EWNDQKLEVQEIILRNFLKRIIV 2036
Score = 39 (18.8 bits), Expect = 3.1e-85, Sum P(6) = 3.1e-85
Identities = 24/146 (16%), Positives = 62/146 (42%)
Query: 1315 VPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLK---DYAMESDETRIYNAAHLMVASLA 1371
+ +A+++ IK + + + E+V+ + E++I+ + +
Sbjct: 890 ITLALNKPIKHKNIAFREMLIEAYKENRLEIVVPFVTKILQRASESKIFKPPNPWTVGIL 949
Query: 1372 GSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLD-----LGCAVIEQ 1426
L + K + S++ ++ L+ + ++ L+ + + T + ++ LG +EQ
Sbjct: 950 KLLIELNEKANWKLSLTFEVEVLLKSFNLTTKSLKPSNFINTPEVIETLSGALGSITLEQ 1009
Query: 1427 AATDKAIQTIDGEIAQQLSLRRKHRE 1452
T++ Q I + QQ L + R+
Sbjct: 1010 QQTEQQRQIILMQQHQQQMLIYQQRQ 1035
Score = 37 (18.1 bits), Expect = 3.1e-84, Sum P(7) = 3.1e-84
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 1284 QLSTPIPNIGTHVIINQKLTALGLHLHFQR 1313
++S IPN ++ + +L L L QR
Sbjct: 331 KVSETIPNTKQSLLYLLSIASLNLELFLQR 360
Score = 37 (18.1 bits), Expect = 3.1e-84, Sum P(7) = 3.1e-84
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 1127 PPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFK-NLGVDM 1167
P P T ++ L A ++ P + D +V+FK +L + +
Sbjct: 270 PLMPTTASLSCLFAALHDGPVIDEFFSCDWKVIFKLDLAIQL 311
>CGD|CAL0001252 [details] [associations]
symbol:CDC39 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030015
"CCR4-NOT core complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0006368 "transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0007124 "pseudohyphal
growth" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0000749 "response to pheromone involved in
conjugation with cellular fusion" evidence=IEA] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
biotic stimulus" evidence=IMP] CGD:CAL0001252 GO:GO:0071216
GO:GO:0036180 GO:GO:0009267 GO:GO:0036170 EMBL:AACQ01000168
KO:K12604 InterPro:IPR007196 InterPro:IPR024557 Pfam:PF12842
Pfam:PF04054 RefSeq:XP_712097.1 ProteinModelPortal:Q59R01
STRING:Q59R01 GeneID:3646278 KEGG:cal:CaO19.1084 Uniprot:Q59R01
Length = 2016
Score = 496 (179.7 bits), Expect = 7.9e-143, Sum P(5) = 7.9e-143
Identities = 144/537 (26%), Positives = 248/537 (46%)
Query: 964 EAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDL 1023
E P ++DK+ F +NN++ N+ + E E+L E Y+ WF+ Y+V RA EPN H+L
Sbjct: 652 EEPPESIRDKLLFSVNNMTGENL--RLSEIQEVLTESYFAWFSDYLVSDRAKAEPNNHEL 709
Query: 1024 YLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQ 1083
Y K + + + I+ + + ++ + K S ER+ LKNLG+WLG++T+ ++
Sbjct: 710 YSKLVKSLANPIFFEYILNVSLKEVDYIIRN--FKDSRSERNQLKNLGAWLGRITLANDK 767
Query: 1084 VLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIY 1143
LR I K L++EAY+ + ++PF KIL+ Q S ++PPNPW + ++ +LAE+Y
Sbjct: 768 PLRRDYIALKFLLVEAYDFNSLPLILPFVCKILDQAQYSKVFKPPNPWVVGVMKVLAELY 827
Query: 1144 SMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVP 1203
+LK+ LKF+IEVL + + +KDI ++++++ E P + G S Q V
Sbjct: 828 ECADLKLQLKFEIEVLLNSFNMKIKDIEQSTIIRNHNPE----PTALARMFGISS-QSVN 882
Query: 1204 EVKPAIVSPLGHVDLPLDVASP-PNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISD 1262
L L ++ +P P + + P L + ++
Sbjct: 883 LANEMTRLSLEGSQLGNNIQAPFPQQIIESKQFPGISQPQM--QNVLQQQQQQQQQQQQQ 940
Query: 1263 QLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRA 1322
QLP Q L Q P Q + P + +I + H + +R ++ RA
Sbjct: 941 QLPPQQQL----PGQLP--PQQQAEPALDTSFSTLIGNSIFTQ--HANLRRAFQASLSRA 992
Query: 1323 IKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCK-- 1380
++E I + V TTK L+ KD+A E D + N+ + SL S A V+C
Sbjct: 993 VRECTPHICNKVVETVVTTTKALITKDFATERDIEKFRNSYQKLALSL--SHAMVSCNGR 1050
Query: 1381 ----EPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTI 1436
E + ++ L N+ + +A L A+Q N+ L +++ + + I
Sbjct: 1051 KALVETIEATMLQLLGNNPNEVPLAE--LNSAIQA----NVGLCVDIVDVLVGESILDII 1104
Query: 1437 DGEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDF 1493
+ + ++ LR H + F + S+ +P L LS Q ++YE F
Sbjct: 1105 EARMQTEVFLREHHTATAPNEPFIAEGASDYSLRLPNPLGLALTGLSAQQLKIYEHF 1161
Score = 476 (172.6 bits), Expect = 7.9e-143, Sum P(5) = 7.9e-143
Identities = 113/312 (36%), Positives = 173/312 (55%)
Query: 2096 NAELGVPV-RFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRN 2154
N++ G V YK R+ + +LHDFPEFL + H+ IP IQ+RNI+LSA P++
Sbjct: 1718 NSQQGPEVINVTYKAINRIFIGILHDFPEFLVECHYQLVTSIPRGYIQLRNIVLSATPKD 1777
Query: 2155 MRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELK 2214
+ +PDP T LK++ LPEI + P +F + L ++ V+++L+ PG + +
Sbjct: 1778 IHVPDPFTQGLKVERLPEINESPVVFYKPIEDLSKVGLKKPVENFLRIPAPG--LMRTIY 1835
Query: 2215 QKLLL-PPSEAASAG----TRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTA 2269
L L P E G +N+ LIN+LVL+VG+ ++ R + + SS A
Sbjct: 1836 NGLKLNQPKEVNELGYEETINFNIKLINALVLHVGISSVAD---RLPNNRGFNTKSSQVA 1892
Query: 2270 FLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAE------- 2322
LV L+ +TE +Y +NA ANQLRYPN+HTH+F ++L+ ++
Sbjct: 1893 LLVD--------LMNYGNTEFKYHLINAIANQLRYPNSHTHWFIGIILHFFSNNNIWNSN 1944
Query: 2323 ANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIR-CAPEIEKLF 2381
N+ ++QE ITRVL ER I N+PHPWGL I F EL+KN Y F+ F++ E++ +F
Sbjct: 1945 GNKLVVQEIITRVLLERRISNKPHPWGLTILFTELVKNGDYGFFELPFVKDSVEEVKNIF 2004
Query: 2382 ESVARSCGGLKP 2393
++ + G P
Sbjct: 2005 NVLSINVKGSTP 2016
Score = 307 (113.1 bits), Expect = 7.9e-143, Sum P(5) = 7.9e-143
Identities = 89/315 (28%), Positives = 155/315 (49%)
Query: 519 DCTIRILEICQELKILSSVLEMI---PSPFAIRLAVIAS-----QKELVDLE-KWLSINL 569
D ++L + + +L++ S AI++ V +S K ++D + K +
Sbjct: 302 DAADKVLTLASSFGLTQEILDIFWAFDSKIAIKILVESSLFGYDYKSVIDSKLKDPQVKT 361
Query: 570 STYKDVFFEECLKFVKEVQFGRSQDFS-AQPFHHSGALLNLYMEKIPVILKLLKAHIGLI 628
S Y+ + E L + + R Q AQ AL + KIP + LL+ I
Sbjct: 362 SIYQALC--EALDERAQKDYERGQQVQQAQQLQQQQALPPHQVLKIPTVYYLLEK-IKSS 418
Query: 629 TSTKLSEEIEKFQAVVLDSTPRL---QNG--EA--ADSSTSEGYADDIEAEANSYFHQMF 681
++ + Q ++L + PRL NG EA A+ S + +E E +Y+ +M+
Sbjct: 419 NGVVDAKTLRNLQLLLLTTYPRLINFGNGHDEAILANEEKSPFFPPSVEMEMKAYYSKMY 478
Query: 682 SGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSI 741
+ +L I+ +V ML + K S +F CMI +L +EY+FF +YP L ++LFG++
Sbjct: 479 NKELEIKEIVDMLTQMKASDDLHSQDVFACMIHSLLDEYKFFSEYPLSALASTSLLFGAL 538
Query: 742 IKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISH 801
++ L+ TL +AL + ++ +P DS +F F ++L F RL E+P YC H+L+
Sbjct: 539 LEKDLIQGTTLTVALNFIWESCNQPQDSHLFKFAVQSLYNFKSRLHEYPIYCKHLLECRS 598
Query: 802 LRSTHAELVAFIERA 816
L S HA++ ++ A
Sbjct: 599 L-SAHAKMYQIVKDA 612
Score = 253 (94.1 bits), Expect = 7.9e-143, Sum P(5) = 7.9e-143
Identities = 69/234 (29%), Positives = 116/234 (49%)
Query: 1872 QVSMLFAEWYQICELPGSNDAACT---RYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHC 1928
Q+ +FAEW ++ L +DA +V L Q+G+L + FF+ E+S+
Sbjct: 1458 QLGYIFAEWVRL--LTHGDDATNELQIEFVKGLIQSGILNNPEYVKTFFKAAIEISITSF 1515
Query: 1929 LSSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVK 1988
+ + T + A+D A L++ I+ VE I L K+L + +
Sbjct: 1516 ATEHELRSRTQHET-------YFAVDTLAMLIVRIVLL--VEDSKQAIDYLKKVLGIIIL 1566
Query: 1989 FILKDAEEKKASFNPRPYFRLFINWL---LDMSSLDP-VADGSNFQILSAFANAFHVLQP 2044
++ D E KA++N R YFR F + L D S LD V + + + F+ LQP
Sbjct: 1567 NLINDHETSKANWNERAYFRFFSSLLSTWCDASVLDEEVTVNLDVKFYNYLGELFNALQP 1626
Query: 2045 LKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAE 2098
+ +P F+FAW+ L+SHR ++PKLL +KG+ + +LL + L+F + + N +
Sbjct: 1627 IVLPGFTFAWISLISHRMYLPKLLELPERKGYATLVKLLSSALKFQQIYGNNKQ 1680
Score = 148 (57.2 bits), Expect = 7.9e-143, Sum P(5) = 7.9e-143
Identities = 49/221 (22%), Positives = 98/221 (44%)
Query: 1597 PAATELYAADSTEPVKEPGASSQSLPST-AAPERIGSSILEPSLQTRDALDKYHIVAQKL 1655
P +T + AA + P ++ S + + P+ I S + T + +V++
Sbjct: 1201 PVSTVVAAAPAPAPPQQQQQSKERIAQAQGVPDDIVSFEQLFTAITANCDKAVQLVSEVT 1260
Query: 1656 DALIGNDAREAEVQGVISEVPEII-LRCISRDEAALAVAQKVFKGLYENASNN-LHFSAH 1713
+ + + + +++ I I E L AQ L+ N + +
Sbjct: 1261 ETKLADLPPNHSIMAALTQALVIAQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIY 1320
Query: 1714 LAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDG 1773
+ IL + + K++ W+++S ++RKFN + + L++ +L+ + ++ + KLI
Sbjct: 1321 VVILDKLCEYSPSTAKDVIWWLVHSSDQRKFNMPVMLSLLKVQLIQPIKLDLSIGKLIKE 1380
Query: 1774 GRNKAATEFAISLLQTLVT-DESRVVI--SELHNLVDALAK 1811
N +FA SLL + T +E R + SE N +DAL+K
Sbjct: 1381 TNNPVVVKFAASLLTNIFTSEEMRPIALRSEFANTLDALSK 1421
Score = 52 (23.4 bits), Expect = 2.4e-86, Sum P(4) = 2.4e-86
Identities = 28/116 (24%), Positives = 52/116 (44%)
Query: 1707 NLHFSAHLAILAAIRD----VCKLVVKEL-TSWVIYSDEERKFNRDITMGLIRSELLNLA 1761
NL + ++ A+R+ +C VV+ + T+ ++ RDI R+ LA
Sbjct: 980 NLRRAFQASLSRAVRECTPHICNKVVETVVTTTKALITKDFATERDIEK--FRNSYQKLA 1037
Query: 1762 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKL-IEIV 1816
H A + GR ++LQ L + + V ++EL++ + A L ++IV
Sbjct: 1038 LSLSH-AMVSCNGRKALVETIEATMLQLLGNNPNEVPLAELNSAIQANVGLCVDIV 1092
Score = 50 (22.7 bits), Expect = 6.1e-116, Sum P(5) = 6.1e-116
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 683 GQLTIEAM--VQMLARFKESSVKREHSIFE------CMIGNLFE-EYRFFPKY 726
G+L I+ + +Q + ++ +++H + E + LFE +YR FP+Y
Sbjct: 188 GKLEIQVITKIQQQQQQQQQQQQQQHQLSEQDKKLNAFLNQLFEHDYRVFPEY 240
Score = 49 (22.3 bits), Expect = 1.5e-111, Sum P(4) = 1.5e-111
Identities = 25/75 (33%), Positives = 32/75 (42%)
Query: 1739 DEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVV 1798
D + + GLI+S +LN EY K KAA E +I+ T SR
Sbjct: 1475 DATNELQIEFVKGLIQSGILNNPEY----VKTFF----KAAIEISITSFATEHELRSRTQ 1526
Query: 1799 ISELHNLVDALAKLI 1813
E + VD LA LI
Sbjct: 1527 -HETYFAVDTLAMLI 1540
Score = 49 (22.3 bits), Expect = 4.9e-86, Sum P(4) = 4.9e-86
Identities = 45/214 (21%), Positives = 85/214 (39%)
Query: 1222 VASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQSQSPFS 1281
+ PP S G T +Q APL+ + + ++ + + P+ Q QS
Sbjct: 1169 IVPPPGSTGITQQQTQSLAPLQQQQQQQQQQQPVSTVVAAAPAPAPP----QQQQQSKER 1224
Query: 1282 VSQLSTPIPNIGTHVIINQKLTALGLHLH--FQRVVPIAMDRAIK-----EIVSGIVQRS 1334
++Q + +P+ V Q TA+ + Q V + + I++ + Q
Sbjct: 1225 IAQ-AQGVPD--DIVSFEQLFTAITANCDKAVQLVSEVTETKLADLPPNHSIMAALTQAL 1281
Query: 1335 VSIATQTTK--ELVLK--DYAM-----ESDETRIYNAAHLMVASLAGSLAHVTCKEPLRG 1385
V T K EL+LK YA+ ++ E + N ++++ + T K+ +
Sbjct: 1282 VIAQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIYVVILDKLCEYSPSTAKDVIWW 1341
Query: 1386 SISSQLRNSLQGLTIASELLEQAVQLVTNDNLDL 1419
+ S + + + LL+ VQL+ LDL
Sbjct: 1342 LVHSSDQRKFN-MPVMLSLLK--VQLIQPIKLDL 1372
Score = 48 (22.0 bits), Expect = 5.5e-58, Sum P(4) = 5.5e-58
Identities = 22/90 (24%), Positives = 37/90 (41%)
Query: 649 PRLQNGEAADSSTSEGYADDIEAEANSYFHQMFSG-QLTIEAMVQMLARFKESSVKR--- 704
P+ Q + ++G DDI + F Q+F+ + VQ+++ E+ +
Sbjct: 1215 PQQQQQSKERIAQAQGVPDDIVS-----FEQLFTAITANCDKAVQLVSEVTETKLADLPP 1269
Query: 705 EHSIFECMIGNLFEEYRFFPKYPERQLRIA 734
HSI + L KYPE L+ A
Sbjct: 1270 NHSIMAALTQALVIAQTNAIKYPELLLKAA 1299
Score = 47 (21.6 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 1128 PNPWTMAIL--GLLAE----IYSMPNLKMNLKFDIEVLFKNLGVDMKDITP 1172
P+PW + IL L+ + +P +K +++ +++ +F L +++K TP
Sbjct: 1967 PHPWGLTILFTELVKNGDYGFFELPFVKDSVE-EVKNIFNVLSINVKGSTP 2016
Score = 45 (20.9 bits), Expect = 5.1e-69, Sum P(4) = 5.1e-69
Identities = 35/148 (23%), Positives = 57/148 (38%)
Query: 1230 GPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGL-----FQASQSQSPFSVSQ 1284
GP +LL + P L D+ +A + +P +QGL F +S S +Q
Sbjct: 11 GPENLLPEKLLPSLLQIKPNEIDQGIALILAEILIPGSQGLSQGLTFASSLPGSNAKGAQ 70
Query: 1285 LSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKE 1344
L +I N + H+H Q + + R I+ V I Q S+ +
Sbjct: 71 LQACFKSIENSGKFNVNWYEVFNHVH-QYLFD-SSQRDIQPSVGSITQFLSSLDFKQEPI 128
Query: 1345 LVLKDYAMESDETRIYNAAHLMVASLAG 1372
+ +Y ++T +Y H AS G
Sbjct: 129 DIFLNYEWWFNKTLLY-ILHSSDASQGG 155
Score = 41 (19.5 bits), Expect = 2.2e-76, Sum P(4) = 2.2e-76
Identities = 33/139 (23%), Positives = 56/139 (40%)
Query: 2249 HQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYL---FLNAAAN-QLRY 2304
H+L++RT H ++ +L +V L + + Q +D + L LN + +
Sbjct: 1519 HELRSRTQH-ETYFAVDTLAMLIVRIVL-LVEDSKQAIDYLKKVLGIIILNLINDHETSK 1576
Query: 2305 PN-NHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRY 2363
N N YF F L + ++ E++T L V + G L ++ I P +
Sbjct: 1577 ANWNERAYFRFFSSLLSTWCDASVLDEEVT----VNLDVKFYNYLGELFNALQPIVLPGF 1632
Query: 2364 NFWNQSFIRCAPEIEKLFE 2382
F S I + KL E
Sbjct: 1633 TFAWISLISHRMYLPKLLE 1651
Score = 39 (18.8 bits), Expect = 2.1e-68, Sum P(4) = 2.1e-68
Identities = 15/66 (22%), Positives = 28/66 (42%)
Query: 37 YGIEGSTMMLQTCMDHLNLHGTGLKN----PQLESVVASVFKYIMDKPNFSTVFSQSVKI 92
+GI ++ L M L+L G+ L N P + ++ S + +P V Q +
Sbjct: 874 FGISSQSVNLANEMTRLSLEGSQLGNNIQAPFPQQIIESKQFPGISQPQMQNVLQQQQQQ 933
Query: 93 TEINEQ 98
+ +Q
Sbjct: 934 QQQQQQ 939
Score = 39 (18.8 bits), Expect = 2.3e-66, Sum P(3) = 2.3e-66
Identities = 9/49 (18%), Positives = 22/49 (44%)
Query: 2297 AAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRP 2345
A N ++YP + + L+ + ++ + +I V+ ++L P
Sbjct: 1284 AQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIYVVILDKLCEYSP 1332
>UNIPROTKB|Q59R01 [details] [associations]
symbol:CDC39 "Potential mRNA deadenylase and CCR4-NOT
complex subunit Cdc39p" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
CGD:CAL0001252 GO:GO:0071216 GO:GO:0036180 GO:GO:0009267
GO:GO:0036170 EMBL:AACQ01000168 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 RefSeq:XP_712097.1
ProteinModelPortal:Q59R01 STRING:Q59R01 GeneID:3646278
KEGG:cal:CaO19.1084 Uniprot:Q59R01
Length = 2016
Score = 496 (179.7 bits), Expect = 7.9e-143, Sum P(5) = 7.9e-143
Identities = 144/537 (26%), Positives = 248/537 (46%)
Query: 964 EAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDL 1023
E P ++DK+ F +NN++ N+ + E E+L E Y+ WF+ Y+V RA EPN H+L
Sbjct: 652 EEPPESIRDKLLFSVNNMTGENL--RLSEIQEVLTESYFAWFSDYLVSDRAKAEPNNHEL 709
Query: 1024 YLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQ 1083
Y K + + + I+ + + ++ + K S ER+ LKNLG+WLG++T+ ++
Sbjct: 710 YSKLVKSLANPIFFEYILNVSLKEVDYIIRN--FKDSRSERNQLKNLGAWLGRITLANDK 767
Query: 1084 VLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIY 1143
LR I K L++EAY+ + ++PF KIL+ Q S ++PPNPW + ++ +LAE+Y
Sbjct: 768 PLRRDYIALKFLLVEAYDFNSLPLILPFVCKILDQAQYSKVFKPPNPWVVGVMKVLAELY 827
Query: 1144 SMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVP 1203
+LK+ LKF+IEVL + + +KDI ++++++ E P + G S Q V
Sbjct: 828 ECADLKLQLKFEIEVLLNSFNMKIKDIEQSTIIRNHNPE----PTALARMFGISS-QSVN 882
Query: 1204 EVKPAIVSPLGHVDLPLDVASP-PNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISD 1262
L L ++ +P P + + P L + ++
Sbjct: 883 LANEMTRLSLEGSQLGNNIQAPFPQQIIESKQFPGISQPQM--QNVLQQQQQQQQQQQQQ 940
Query: 1263 QLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRA 1322
QLP Q L Q P Q + P + +I + H + +R ++ RA
Sbjct: 941 QLPPQQQL----PGQLP--PQQQAEPALDTSFSTLIGNSIFTQ--HANLRRAFQASLSRA 992
Query: 1323 IKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCK-- 1380
++E I + V TTK L+ KD+A E D + N+ + SL S A V+C
Sbjct: 993 VRECTPHICNKVVETVVTTTKALITKDFATERDIEKFRNSYQKLALSL--SHAMVSCNGR 1050
Query: 1381 ----EPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTI 1436
E + ++ L N+ + +A L A+Q N+ L +++ + + I
Sbjct: 1051 KALVETIEATMLQLLGNNPNEVPLAE--LNSAIQA----NVGLCVDIVDVLVGESILDII 1104
Query: 1437 DGEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDF 1493
+ + ++ LR H + F + S+ +P L LS Q ++YE F
Sbjct: 1105 EARMQTEVFLREHHTATAPNEPFIAEGASDYSLRLPNPLGLALTGLSAQQLKIYEHF 1161
Score = 476 (172.6 bits), Expect = 7.9e-143, Sum P(5) = 7.9e-143
Identities = 113/312 (36%), Positives = 173/312 (55%)
Query: 2096 NAELGVPV-RFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRN 2154
N++ G V YK R+ + +LHDFPEFL + H+ IP IQ+RNI+LSA P++
Sbjct: 1718 NSQQGPEVINVTYKAINRIFIGILHDFPEFLVECHYQLVTSIPRGYIQLRNIVLSATPKD 1777
Query: 2155 MRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELK 2214
+ +PDP T LK++ LPEI + P +F + L ++ V+++L+ PG + +
Sbjct: 1778 IHVPDPFTQGLKVERLPEINESPVVFYKPIEDLSKVGLKKPVENFLRIPAPG--LMRTIY 1835
Query: 2215 QKLLL-PPSEAASAG----TRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTA 2269
L L P E G +N+ LIN+LVL+VG+ ++ R + + SS A
Sbjct: 1836 NGLKLNQPKEVNELGYEETINFNIKLINALVLHVGISSVAD---RLPNNRGFNTKSSQVA 1892
Query: 2270 FLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAE------- 2322
LV L+ +TE +Y +NA ANQLRYPN+HTH+F ++L+ ++
Sbjct: 1893 LLVD--------LMNYGNTEFKYHLINAIANQLRYPNSHTHWFIGIILHFFSNNNIWNSN 1944
Query: 2323 ANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIR-CAPEIEKLF 2381
N+ ++QE ITRVL ER I N+PHPWGL I F EL+KN Y F+ F++ E++ +F
Sbjct: 1945 GNKLVVQEIITRVLLERRISNKPHPWGLTILFTELVKNGDYGFFELPFVKDSVEEVKNIF 2004
Query: 2382 ESVARSCGGLKP 2393
++ + G P
Sbjct: 2005 NVLSINVKGSTP 2016
Score = 307 (113.1 bits), Expect = 7.9e-143, Sum P(5) = 7.9e-143
Identities = 89/315 (28%), Positives = 155/315 (49%)
Query: 519 DCTIRILEICQELKILSSVLEMI---PSPFAIRLAVIAS-----QKELVDLE-KWLSINL 569
D ++L + + +L++ S AI++ V +S K ++D + K +
Sbjct: 302 DAADKVLTLASSFGLTQEILDIFWAFDSKIAIKILVESSLFGYDYKSVIDSKLKDPQVKT 361
Query: 570 STYKDVFFEECLKFVKEVQFGRSQDFS-AQPFHHSGALLNLYMEKIPVILKLLKAHIGLI 628
S Y+ + E L + + R Q AQ AL + KIP + LL+ I
Sbjct: 362 SIYQALC--EALDERAQKDYERGQQVQQAQQLQQQQALPPHQVLKIPTVYYLLEK-IKSS 418
Query: 629 TSTKLSEEIEKFQAVVLDSTPRL---QNG--EA--ADSSTSEGYADDIEAEANSYFHQMF 681
++ + Q ++L + PRL NG EA A+ S + +E E +Y+ +M+
Sbjct: 419 NGVVDAKTLRNLQLLLLTTYPRLINFGNGHDEAILANEEKSPFFPPSVEMEMKAYYSKMY 478
Query: 682 SGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSI 741
+ +L I+ +V ML + K S +F CMI +L +EY+FF +YP L ++LFG++
Sbjct: 479 NKELEIKEIVDMLTQMKASDDLHSQDVFACMIHSLLDEYKFFSEYPLSALASTSLLFGAL 538
Query: 742 IKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISH 801
++ L+ TL +AL + ++ +P DS +F F ++L F RL E+P YC H+L+
Sbjct: 539 LEKDLIQGTTLTVALNFIWESCNQPQDSHLFKFAVQSLYNFKSRLHEYPIYCKHLLECRS 598
Query: 802 LRSTHAELVAFIERA 816
L S HA++ ++ A
Sbjct: 599 L-SAHAKMYQIVKDA 612
Score = 253 (94.1 bits), Expect = 7.9e-143, Sum P(5) = 7.9e-143
Identities = 69/234 (29%), Positives = 116/234 (49%)
Query: 1872 QVSMLFAEWYQICELPGSNDAACT---RYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHC 1928
Q+ +FAEW ++ L +DA +V L Q+G+L + FF+ E+S+
Sbjct: 1458 QLGYIFAEWVRL--LTHGDDATNELQIEFVKGLIQSGILNNPEYVKTFFKAAIEISITSF 1515
Query: 1929 LSSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVK 1988
+ + T + A+D A L++ I+ VE I L K+L + +
Sbjct: 1516 ATEHELRSRTQHET-------YFAVDTLAMLIVRIVLL--VEDSKQAIDYLKKVLGIIIL 1566
Query: 1989 FILKDAEEKKASFNPRPYFRLFINWL---LDMSSLDP-VADGSNFQILSAFANAFHVLQP 2044
++ D E KA++N R YFR F + L D S LD V + + + F+ LQP
Sbjct: 1567 NLINDHETSKANWNERAYFRFFSSLLSTWCDASVLDEEVTVNLDVKFYNYLGELFNALQP 1626
Query: 2045 LKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAE 2098
+ +P F+FAW+ L+SHR ++PKLL +KG+ + +LL + L+F + + N +
Sbjct: 1627 IVLPGFTFAWISLISHRMYLPKLLELPERKGYATLVKLLSSALKFQQIYGNNKQ 1680
Score = 148 (57.2 bits), Expect = 7.9e-143, Sum P(5) = 7.9e-143
Identities = 49/221 (22%), Positives = 98/221 (44%)
Query: 1597 PAATELYAADSTEPVKEPGASSQSLPST-AAPERIGSSILEPSLQTRDALDKYHIVAQKL 1655
P +T + AA + P ++ S + + P+ I S + T + +V++
Sbjct: 1201 PVSTVVAAAPAPAPPQQQQQSKERIAQAQGVPDDIVSFEQLFTAITANCDKAVQLVSEVT 1260
Query: 1656 DALIGNDAREAEVQGVISEVPEII-LRCISRDEAALAVAQKVFKGLYENASNN-LHFSAH 1713
+ + + + +++ I I E L AQ L+ N + +
Sbjct: 1261 ETKLADLPPNHSIMAALTQALVIAQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIY 1320
Query: 1714 LAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDG 1773
+ IL + + K++ W+++S ++RKFN + + L++ +L+ + ++ + KLI
Sbjct: 1321 VVILDKLCEYSPSTAKDVIWWLVHSSDQRKFNMPVMLSLLKVQLIQPIKLDLSIGKLIKE 1380
Query: 1774 GRNKAATEFAISLLQTLVT-DESRVVI--SELHNLVDALAK 1811
N +FA SLL + T +E R + SE N +DAL+K
Sbjct: 1381 TNNPVVVKFAASLLTNIFTSEEMRPIALRSEFANTLDALSK 1421
Score = 52 (23.4 bits), Expect = 2.4e-86, Sum P(4) = 2.4e-86
Identities = 28/116 (24%), Positives = 52/116 (44%)
Query: 1707 NLHFSAHLAILAAIRD----VCKLVVKEL-TSWVIYSDEERKFNRDITMGLIRSELLNLA 1761
NL + ++ A+R+ +C VV+ + T+ ++ RDI R+ LA
Sbjct: 980 NLRRAFQASLSRAVRECTPHICNKVVETVVTTTKALITKDFATERDIEK--FRNSYQKLA 1037
Query: 1762 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKL-IEIV 1816
H A + GR ++LQ L + + V ++EL++ + A L ++IV
Sbjct: 1038 LSLSH-AMVSCNGRKALVETIEATMLQLLGNNPNEVPLAELNSAIQANVGLCVDIV 1092
Score = 50 (22.7 bits), Expect = 6.1e-116, Sum P(5) = 6.1e-116
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 683 GQLTIEAM--VQMLARFKESSVKREHSIFE------CMIGNLFE-EYRFFPKY 726
G+L I+ + +Q + ++ +++H + E + LFE +YR FP+Y
Sbjct: 188 GKLEIQVITKIQQQQQQQQQQQQQQHQLSEQDKKLNAFLNQLFEHDYRVFPEY 240
Score = 49 (22.3 bits), Expect = 1.5e-111, Sum P(4) = 1.5e-111
Identities = 25/75 (33%), Positives = 32/75 (42%)
Query: 1739 DEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVV 1798
D + + GLI+S +LN EY K KAA E +I+ T SR
Sbjct: 1475 DATNELQIEFVKGLIQSGILNNPEY----VKTFF----KAAIEISITSFATEHELRSRTQ 1526
Query: 1799 ISELHNLVDALAKLI 1813
E + VD LA LI
Sbjct: 1527 -HETYFAVDTLAMLI 1540
Score = 49 (22.3 bits), Expect = 4.9e-86, Sum P(4) = 4.9e-86
Identities = 45/214 (21%), Positives = 85/214 (39%)
Query: 1222 VASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQSQSPFS 1281
+ PP S G T +Q APL+ + + ++ + + P+ Q QS
Sbjct: 1169 IVPPPGSTGITQQQTQSLAPLQQQQQQQQQQQPVSTVVAAAPAPAPP----QQQQQSKER 1224
Query: 1282 VSQLSTPIPNIGTHVIINQKLTALGLHLH--FQRVVPIAMDRAIK-----EIVSGIVQRS 1334
++Q + +P+ V Q TA+ + Q V + + I++ + Q
Sbjct: 1225 IAQ-AQGVPD--DIVSFEQLFTAITANCDKAVQLVSEVTETKLADLPPNHSIMAALTQAL 1281
Query: 1335 VSIATQTTK--ELVLK--DYAM-----ESDETRIYNAAHLMVASLAGSLAHVTCKEPLRG 1385
V T K EL+LK YA+ ++ E + N ++++ + T K+ +
Sbjct: 1282 VIAQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIYVVILDKLCEYSPSTAKDVIWW 1341
Query: 1386 SISSQLRNSLQGLTIASELLEQAVQLVTNDNLDL 1419
+ S + + + LL+ VQL+ LDL
Sbjct: 1342 LVHSSDQRKFN-MPVMLSLLK--VQLIQPIKLDL 1372
Score = 48 (22.0 bits), Expect = 5.5e-58, Sum P(4) = 5.5e-58
Identities = 22/90 (24%), Positives = 37/90 (41%)
Query: 649 PRLQNGEAADSSTSEGYADDIEAEANSYFHQMFSG-QLTIEAMVQMLARFKESSVKR--- 704
P+ Q + ++G DDI + F Q+F+ + VQ+++ E+ +
Sbjct: 1215 PQQQQQSKERIAQAQGVPDDIVS-----FEQLFTAITANCDKAVQLVSEVTETKLADLPP 1269
Query: 705 EHSIFECMIGNLFEEYRFFPKYPERQLRIA 734
HSI + L KYPE L+ A
Sbjct: 1270 NHSIMAALTQALVIAQTNAIKYPELLLKAA 1299
Score = 47 (21.6 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 1128 PNPWTMAIL--GLLAE----IYSMPNLKMNLKFDIEVLFKNLGVDMKDITP 1172
P+PW + IL L+ + +P +K +++ +++ +F L +++K TP
Sbjct: 1967 PHPWGLTILFTELVKNGDYGFFELPFVKDSVE-EVKNIFNVLSINVKGSTP 2016
Score = 45 (20.9 bits), Expect = 5.1e-69, Sum P(4) = 5.1e-69
Identities = 35/148 (23%), Positives = 57/148 (38%)
Query: 1230 GPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGL-----FQASQSQSPFSVSQ 1284
GP +LL + P L D+ +A + +P +QGL F +S S +Q
Sbjct: 11 GPENLLPEKLLPSLLQIKPNEIDQGIALILAEILIPGSQGLSQGLTFASSLPGSNAKGAQ 70
Query: 1285 LSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKE 1344
L +I N + H+H Q + + R I+ V I Q S+ +
Sbjct: 71 LQACFKSIENSGKFNVNWYEVFNHVH-QYLFD-SSQRDIQPSVGSITQFLSSLDFKQEPI 128
Query: 1345 LVLKDYAMESDETRIYNAAHLMVASLAG 1372
+ +Y ++T +Y H AS G
Sbjct: 129 DIFLNYEWWFNKTLLY-ILHSSDASQGG 155
Score = 41 (19.5 bits), Expect = 2.2e-76, Sum P(4) = 2.2e-76
Identities = 33/139 (23%), Positives = 56/139 (40%)
Query: 2249 HQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYL---FLNAAAN-QLRY 2304
H+L++RT H ++ +L +V L + + Q +D + L LN + +
Sbjct: 1519 HELRSRTQH-ETYFAVDTLAMLIVRIVL-LVEDSKQAIDYLKKVLGIIILNLINDHETSK 1576
Query: 2305 PN-NHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRY 2363
N N YF F L + ++ E++T L V + G L ++ I P +
Sbjct: 1577 ANWNERAYFRFFSSLLSTWCDASVLDEEVT----VNLDVKFYNYLGELFNALQPIVLPGF 1632
Query: 2364 NFWNQSFIRCAPEIEKLFE 2382
F S I + KL E
Sbjct: 1633 TFAWISLISHRMYLPKLLE 1651
Score = 39 (18.8 bits), Expect = 2.1e-68, Sum P(4) = 2.1e-68
Identities = 15/66 (22%), Positives = 28/66 (42%)
Query: 37 YGIEGSTMMLQTCMDHLNLHGTGLKN----PQLESVVASVFKYIMDKPNFSTVFSQSVKI 92
+GI ++ L M L+L G+ L N P + ++ S + +P V Q +
Sbjct: 874 FGISSQSVNLANEMTRLSLEGSQLGNNIQAPFPQQIIESKQFPGISQPQMQNVLQQQQQQ 933
Query: 93 TEINEQ 98
+ +Q
Sbjct: 934 QQQQQQ 939
Score = 39 (18.8 bits), Expect = 2.3e-66, Sum P(3) = 2.3e-66
Identities = 9/49 (18%), Positives = 22/49 (44%)
Query: 2297 AAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRP 2345
A N ++YP + + L+ + ++ + +I V+ ++L P
Sbjct: 1284 AQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIYVVILDKLCEYSP 1332
>RGD|1308009 [details] [associations]
symbol:Cnot1 "CCR4-NOT transcription complex, subunit 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010606 "positive regulation of cytoplasmic mRNA
processing body assembly" evidence=ISO] [GO:0030014 "CCR4-NOT
complex" evidence=ISO] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033147 "negative regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0042974
"retinoic acid receptor binding" evidence=ISO] [GO:0048387
"negative regulation of retinoic acid receptor signaling pathway"
evidence=ISO] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISO]
[GO:1900153 "positive regulation of nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=ISO]
[GO:2000036 "regulation of stem cell maintenance" evidence=ISO]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=ISO]
RGD:1308009 GO:GO:0005778 GO:GO:0000932 InterPro:IPR007196
Pfam:PF04054 UniGene:Rn.56498 EMBL:BC086325 IPI:IPI00359049
STRING:Q5RK32 PRIDE:Q5RK32 UCSC:RGD:1308009 HOVERGEN:HBG106203
InParanoid:Q5RK32 ArrayExpress:Q5RK32 Genevestigator:Q5RK32
Uniprot:Q5RK32
Length = 455
Score = 1275 (453.9 bits), Expect = 1.1e-128, P = 1.1e-128
Identities = 251/448 (56%), Positives = 320/448 (71%)
Query: 1953 IDIYAKLMLSILKCCPVEQGS-SKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFI 2011
+D + +L+ ++K + +KI LL+K+L + V +L+D + +++ F PY R+FI
Sbjct: 15 LDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFI 74
Query: 2012 NWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGN 2071
LL++++ + V + NFQ L+AF N FH+L+P K P F +AWLEL+SHR F+ ++L
Sbjct: 75 MLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLAHT 134
Query: 2072 GQ-KGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHF 2130
Q KGWP +LL++L ++L PFLRN EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+
Sbjct: 135 PQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHY 194
Query: 2131 TFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAK 2190
FCDVIPP+CIQ+RN+ILSAFPRNMRLPDP TPNLK+D+L EI PRI + +
Sbjct: 195 GFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PP 253
Query: 2191 QMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQ 2250
Q + D+D YLKT P +FLS+L+ L + + G RYN+ LIN+LVLYVG QAI
Sbjct: 254 QFKKDLDSYLKTRSP-VTFLSDLRSNLQV----SNEPGNRYNLQLINALVLYVGTQAI-- 306
Query: 2251 LQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTH 2310
+H + G+ S++ SA +DIFQ L DLDTEGRYLFLNA ANQLRYPN+HTH
Sbjct: 307 -----AHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTH 361
Query: 2311 YFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSF 2370
YFS +LYL+AEAN E IQEQITRVL ERLIVNRPHPWGLLITFIELIKNP + FWN F
Sbjct: 362 YFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEF 421
Query: 2371 IRCAPEIEKLFESVARSCGGLKPVDDSM 2398
+ CAPEIEKLF+SVA+ C G K M
Sbjct: 422 VHCAPEIEKLFQSVAQCCMGQKQAQQVM 449
>DICTYBASE|DDB_G0287399 [details] [associations]
symbol:DDB_G0287399 species:44689 "Dictyostelium
discoideum" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0287399
GO:GO:0005576 EMBL:AAFI02000100 eggNOG:NOG12793 RefSeq:XP_637288.1
EnsemblProtists:DDB0187468 GeneID:8626120 KEGG:ddi:DDB_G0287399
OMA:ETINIFH Uniprot:Q54KD5
Length = 486
Score = 125 (49.1 bits), Expect = 0.00087, P = 0.00087
Identities = 42/145 (28%), Positives = 73/145 (50%)
Query: 1502 SSQGSHA-MSAGSLTSSGDAAQASAYGLAGGQGNQGYSS--SAGST-----GFDAVSRPS 1553
SS GS S+G+++SSG A+ ++ G G + G SS S+GS+ G + S+
Sbjct: 52 SSSGSGTGQSSGTVSSSGSASNNTSSGSQSGNASSGSSSGSSSGSSSGSSSGSSSGSQSG 111
Query: 1554 DVASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKE 1613
+ +SG++ S S+G S + G + G + S+S NA+ P++ ++ S++
Sbjct: 112 NASSGSSSSGSSGSQSGN-ASSGTSSGSSSSSGSSQSGNASSGPSSGTTSSSGSSQSESS 170
Query: 1614 PGASSQSLPSTAAPERIGSSILEPS 1638
++ S PS+ GSS E S
Sbjct: 171 QSGNASSGPSSGTTSSSGSSQSESS 195
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 2408 2352 0.00098 126 3 11 22 0.39 34
41 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 635 (67 KB)
Total size of DFA: 802 KB (2338 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 214.94u 0.21s 215.15t Elapsed: 00:00:13
Total cpu time: 214.97u 0.21s 215.18t Elapsed: 00:00:13
Start: Thu May 9 20:24:26 2013 End: Thu May 9 20:24:39 2013