Query 000080
Match_columns 2389
No_of_seqs 459 out of 1132
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 13:39:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000080.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000080hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 99.9 4.1E-20 1.4E-24 230.8 58.5 204 27-285 4-220 (611)
2 2ymu_A WD-40 repeat protein; u 99.9 2.5E-18 8.6E-23 208.4 56.6 192 35-284 13-209 (577)
3 3ow8_A WD repeat-containing pr 99.9 5.3E-22 1.8E-26 228.9 20.0 171 2193-2385 135-309 (321)
4 4gqb_B Methylosome protein 50; 99.9 2.1E-21 7.1E-26 227.8 22.4 170 2193-2383 94-275 (344)
5 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.6E-21 5.5E-26 225.8 19.4 176 2192-2384 28-212 (345)
6 2ynn_A Coatomer subunit beta'; 99.9 1.5E-21 5.2E-26 221.8 18.4 143 2221-2384 15-159 (304)
7 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.9E-20 6.5E-25 216.9 27.3 213 35-286 102-335 (345)
8 2hes_X YDR267CP; beta-propelle 99.9 2.6E-21 8.8E-26 222.8 19.8 175 2193-2383 25-216 (330)
9 1got_B GT-beta; complex (GTP-b 99.9 4.4E-21 1.5E-25 221.3 19.7 169 2195-2385 157-331 (340)
10 1vyh_C Platelet-activating fac 99.9 6.1E-21 2.1E-25 226.7 21.4 173 2192-2385 162-357 (410)
11 3frx_A Guanine nucleotide-bind 99.9 5.9E-21 2E-25 218.9 20.3 175 2189-2385 27-215 (319)
12 3ow8_A WD repeat-containing pr 99.9 4.1E-21 1.4E-25 221.5 18.6 171 2193-2385 93-267 (321)
13 1vyh_C Platelet-activating fac 99.9 4E-21 1.4E-25 228.3 19.0 144 2221-2385 110-253 (410)
14 2ynn_A Coatomer subunit beta'; 99.9 9.4E-21 3.2E-25 215.3 21.2 173 2193-2385 68-247 (304)
15 4gqb_B Methylosome protein 50; 99.9 7.5E-21 2.6E-25 223.1 19.1 170 2193-2383 140-316 (344)
16 1pgu_A Actin interacting prote 99.9 7.8E-17 2.7E-21 195.2 54.2 212 29-285 6-237 (615)
17 2xzm_R RACK1; ribosome, transl 99.8 2.7E-20 9.3E-25 214.6 21.0 174 2191-2385 38-232 (343)
18 1nr0_A Actin interacting prote 99.8 4.2E-20 1.4E-24 230.7 21.5 144 2221-2385 149-343 (611)
19 3iz6_a 40S ribosomal protein R 99.8 3.6E-20 1.2E-24 217.3 19.1 175 2189-2385 167-363 (380)
20 2ymu_A WD-40 repeat protein; u 99.8 3.5E-20 1.2E-24 224.5 19.6 167 2193-2384 398-567 (577)
21 2pm7_B Protein transport prote 99.8 5.3E-20 1.8E-24 208.6 19.8 173 2192-2383 21-224 (297)
22 2pbi_B Guanine nucleotide-bind 99.8 9E-20 3.1E-24 212.7 21.8 171 2192-2384 166-344 (354)
23 4ery_A WD repeat-containing pr 99.8 8E-20 2.7E-24 205.8 20.5 144 2221-2385 25-168 (312)
24 2j04_B YDR362CP, TAU91; beta p 99.8 3.7E-20 1.3E-24 230.9 17.9 171 2191-2384 224-415 (524)
25 1got_B GT-beta; complex (GTP-b 99.8 1.4E-19 4.8E-24 208.9 20.1 171 2192-2385 67-245 (340)
26 3frx_A Guanine nucleotide-bind 99.8 1.7E-19 5.6E-24 206.9 20.0 169 2191-2383 76-254 (319)
27 4ery_A WD repeat-containing pr 99.8 3.2E-19 1.1E-23 200.9 21.3 172 2192-2385 35-211 (312)
28 2hes_X YDR267CP; beta-propelle 99.8 7.6E-20 2.6E-24 210.6 16.3 168 2193-2378 71-262 (330)
29 2pm7_B Protein transport prote 99.8 2.5E-19 8.5E-24 203.0 20.2 141 2221-2378 11-157 (297)
30 3dwl_C Actin-related protein 2 99.8 1E-19 3.5E-24 208.9 16.7 175 2193-2384 68-269 (377)
31 4h5i_A Guanine nucleotide-exch 99.8 6.2E-20 2.1E-24 215.7 14.8 184 2184-2384 139-330 (365)
32 1erj_A Transcriptional repress 99.8 2.8E-19 9.6E-24 210.7 20.4 173 2192-2385 135-329 (393)
33 4g56_B MGC81050 protein; prote 99.8 3.2E-19 1.1E-23 208.7 20.1 166 2200-2383 112-287 (357)
34 3dm0_A Maltose-binding peripla 99.8 2.5E-19 8.7E-24 225.9 19.9 175 2192-2385 395-580 (694)
35 4g56_B MGC81050 protein; prote 99.8 2.2E-19 7.6E-24 210.0 18.0 172 2193-2384 152-330 (357)
36 3sfz_A APAF-1, apoptotic pepti 99.8 3E-16 1E-20 208.7 50.0 214 32-286 609-871 (1249)
37 2pbi_B Guanine nucleotide-bind 99.8 3.7E-19 1.2E-23 207.6 19.3 172 2193-2385 77-259 (354)
38 1erj_A Transcriptional repress 99.8 6.1E-19 2.1E-23 207.8 20.6 144 2221-2385 125-275 (393)
39 3dwl_C Actin-related protein 2 99.8 2.6E-19 8.8E-24 205.5 16.3 175 2193-2385 24-224 (377)
40 4h5i_A Guanine nucleotide-exch 99.8 2.2E-18 7.4E-23 202.6 23.9 202 36-286 131-343 (365)
41 2xzm_R RACK1; ribosome, transl 99.8 8E-19 2.7E-23 202.4 19.1 137 2221-2379 23-175 (343)
42 4ggc_A P55CDC, cell division c 99.8 2E-18 6.8E-23 191.7 21.0 184 2192-2385 36-303 (318)
43 3bg1_A Protein SEC13 homolog; 99.8 3.3E-19 1.1E-23 204.1 15.2 187 2185-2385 64-281 (316)
44 4e54_B DNA damage-binding prot 99.8 3.3E-19 1.1E-23 212.4 15.2 144 2221-2382 121-266 (435)
45 3iz6_a 40S ribosomal protein R 99.8 7.7E-19 2.7E-23 206.0 17.5 176 2193-2384 121-316 (380)
46 3f3f_A Nucleoporin SEH1; struc 99.8 1.5E-18 5.1E-23 191.6 18.7 180 2191-2385 22-325 (351)
47 3bg1_A Protein SEC13 homolog; 99.8 1.5E-19 5E-24 207.1 10.6 175 2191-2383 24-233 (316)
48 4gga_A P55CDC, cell division c 99.8 4.1E-18 1.4E-22 201.7 22.6 187 2192-2385 116-383 (420)
49 4e54_B DNA damage-binding prot 99.8 7.3E-19 2.5E-23 209.5 15.7 179 2189-2385 129-315 (435)
50 2w18_A PALB2, fancn, partner a 99.8 6.4E-19 2.2E-23 211.2 14.4 167 2199-2385 153-345 (356)
51 3mmy_A MRNA export factor; mRN 99.8 3.7E-18 1.3E-22 191.8 19.5 176 2192-2385 54-334 (368)
52 3vl1_A 26S proteasome regulato 99.8 1.9E-18 6.5E-23 200.7 17.5 158 2195-2374 71-234 (420)
53 3vl1_A 26S proteasome regulato 99.8 1.9E-18 6.5E-23 200.7 16.2 170 2194-2385 111-310 (420)
54 2oaj_A Protein SNI1; WD40 repe 99.8 1.7E-18 6E-23 227.9 17.4 167 2191-2375 446-689 (902)
55 3f3f_A Nucleoporin SEH1; struc 99.8 7E-18 2.4E-22 186.2 19.1 118 2221-2352 13-142 (351)
56 2aq5_A Coronin-1A; WD40 repeat 99.8 6.5E-18 2.2E-22 197.7 19.4 143 2220-2383 82-237 (402)
57 4gq1_A NUP37; propeller, trans 99.8 3.3E-18 1.1E-22 202.3 16.9 182 2189-2383 98-376 (393)
58 3jrp_A Fusion protein of prote 99.8 1.9E-17 6.4E-22 187.4 22.1 180 2192-2385 69-275 (379)
59 2j04_B YDR362CP, TAU91; beta p 99.8 2.3E-18 7.8E-23 214.9 16.0 177 2194-2383 175-372 (524)
60 2pm9_A Protein WEB1, protein t 99.8 1.2E-17 4.1E-22 192.9 19.9 179 2193-2385 127-325 (416)
61 3lrv_A PRE-mRNA-splicing facto 99.8 3.8E-18 1.3E-22 196.4 15.6 143 2221-2383 127-277 (343)
62 4a11_B DNA excision repair pro 99.8 5.7E-17 1.9E-21 185.3 25.1 174 2193-2385 113-353 (408)
63 3jrp_A Fusion protein of prote 99.8 1.2E-17 4E-22 189.1 18.2 148 2221-2385 13-179 (379)
64 3ei3_B DNA damage-binding prot 99.8 1.7E-17 5.7E-22 191.8 19.8 173 2193-2385 87-270 (383)
65 4aow_A Guanine nucleotide-bind 99.7 9.9E-17 3.4E-21 179.8 25.0 173 2189-2385 137-325 (340)
66 3lrv_A PRE-mRNA-splicing facto 99.7 3.2E-18 1.1E-22 197.0 13.3 173 2189-2385 45-233 (343)
67 3k26_A Polycomb protein EED; W 99.7 1.6E-17 5.5E-22 187.1 18.6 178 2194-2385 87-306 (366)
68 1r5m_A SIR4-interacting protei 99.7 3.3E-17 1.1E-21 187.8 21.5 143 2220-2384 248-412 (425)
69 3i2n_A WD repeat-containing pr 99.7 2.2E-17 7.6E-22 185.8 19.7 170 2192-2382 129-337 (357)
70 2aq5_A Coronin-1A; WD40 repeat 99.7 5.8E-17 2E-21 189.7 23.5 175 2194-2387 146-334 (402)
71 3zwl_B Eukaryotic translation 99.7 3.5E-17 1.2E-21 184.0 20.8 150 2221-2385 34-237 (369)
72 1k8k_C P40, ARP2/3 complex 41 99.7 1.5E-17 5.2E-22 188.6 18.0 178 2193-2385 21-221 (372)
73 2j04_A TAU60, YPL007P, hypothe 99.7 4.3E-17 1.5E-21 205.6 23.8 174 2190-2384 95-285 (588)
74 1sq9_A Antiviral protein SKI8; 99.7 2.2E-17 7.4E-22 190.0 19.0 140 2220-2378 187-366 (397)
75 1k8k_C P40, ARP2/3 complex 41 99.7 3.6E-17 1.2E-21 185.6 20.5 175 2194-2384 66-262 (372)
76 3ei3_B DNA damage-binding prot 99.7 2E-17 7E-22 191.1 18.4 145 2221-2383 75-222 (383)
77 3zwl_B Eukaryotic translation 99.7 1.9E-16 6.5E-21 178.1 25.4 143 2221-2385 177-334 (369)
78 1gxr_A ESG1, transducin-like e 99.7 9.4E-17 3.2E-21 178.8 22.6 168 2193-2384 64-242 (337)
79 1r5m_A SIR4-interacting protei 99.7 8.5E-17 2.9E-21 184.4 22.5 154 2220-2385 150-349 (425)
80 3dw8_B Serine/threonine-protei 99.7 1.3E-17 4.4E-22 194.9 16.0 183 2191-2385 39-304 (447)
81 3mkq_A Coatomer beta'-subunit; 99.7 1.8E-17 6.2E-22 209.3 18.5 144 2221-2385 15-160 (814)
82 3k26_A Polycomb protein EED; W 99.7 7.2E-18 2.5E-22 189.9 13.2 141 2221-2384 71-247 (366)
83 1gxr_A ESG1, transducin-like e 99.7 2.4E-17 8.2E-22 183.6 16.8 150 2221-2385 53-202 (337)
84 3dm0_A Maltose-binding peripla 99.7 2.6E-17 9E-22 207.7 18.8 172 2192-2383 442-619 (694)
85 2xyi_A Probable histone-bindin 99.7 1.1E-16 3.9E-21 190.7 23.1 170 2194-2382 196-394 (430)
86 3dw8_B Serine/threonine-protei 99.7 1.1E-17 3.9E-22 195.3 14.1 150 2220-2385 29-246 (447)
87 3sfz_A APAF-1, apoptotic pepti 99.7 4E-17 1.4E-21 217.1 20.7 144 2222-2385 618-762 (1249)
88 4aez_A CDC20, WD repeat-contai 99.7 1.2E-16 4.2E-21 187.7 21.9 172 2193-2385 187-368 (401)
89 3mmy_A MRNA export factor; mRN 99.7 1.8E-16 6.1E-21 178.2 21.5 134 2221-2377 41-181 (368)
90 4aez_A CDC20, WD repeat-contai 99.7 1.2E-16 4E-21 187.9 20.1 162 2200-2383 110-276 (401)
91 4gq1_A NUP37; propeller, trans 99.7 1.7E-17 5.8E-22 196.2 11.2 146 2223-2385 93-274 (393)
92 2oaj_A Protein SNI1; WD40 repe 99.7 5.8E-17 2E-21 213.5 17.2 170 2193-2384 30-229 (902)
93 2pm9_A Protein WEB1, protein t 99.7 1.5E-16 5E-21 183.8 18.4 169 2200-2383 42-232 (416)
94 2vdu_B TRNA (guanine-N(7)-)-me 99.7 8.7E-17 3E-21 192.1 17.0 148 2221-2385 104-259 (450)
95 4ggc_A P55CDC, cell division c 99.7 2.9E-16 9.9E-21 174.4 19.8 142 2222-2385 28-169 (318)
96 3odt_A Protein DOA1; ubiquitin 99.7 1.7E-16 5.7E-21 175.5 17.8 165 2193-2382 115-282 (313)
97 3gre_A Serine/threonine-protei 99.7 6.8E-17 2.3E-21 190.0 15.3 180 2191-2385 75-280 (437)
98 2j04_A TAU60, YPL007P, hypothe 99.7 8.9E-17 3.1E-21 202.8 17.0 145 2221-2385 87-243 (588)
99 2w18_A PALB2, fancn, partner a 99.7 3.3E-17 1.1E-21 196.5 12.4 150 2185-2351 185-355 (356)
100 3v7d_B Cell division control p 99.7 1.8E-16 6E-21 188.0 18.3 173 2193-2385 133-329 (464)
101 4aow_A Guanine nucleotide-bind 99.7 3.6E-16 1.2E-20 175.2 19.7 174 2192-2385 51-234 (340)
102 3gre_A Serine/threonine-protei 99.7 2.2E-17 7.4E-22 194.2 10.3 173 2191-2385 181-428 (437)
103 2vdu_B TRNA (guanine-N(7)-)-me 99.7 4.5E-16 1.5E-20 186.0 21.4 171 2195-2385 118-326 (450)
104 3i2n_A WD repeat-containing pr 99.7 2.9E-16 9.8E-21 176.8 18.3 171 2193-2385 32-231 (357)
105 1sq9_A Antiviral protein SKI8; 99.7 1.4E-16 4.9E-21 183.2 16.0 151 2220-2385 122-310 (397)
106 2xyi_A Probable histone-bindin 99.7 5.7E-16 2E-20 184.7 21.3 144 2221-2381 183-336 (430)
107 3mkq_A Coatomer beta'-subunit; 99.7 2E-16 6.9E-21 199.8 18.3 173 2193-2385 26-205 (814)
108 4a11_B DNA excision repair pro 99.7 1.1E-15 3.6E-20 174.9 21.4 173 2191-2385 55-264 (408)
109 1pgu_A Actin interacting prote 99.7 2.9E-16 9.9E-21 190.2 17.3 142 2221-2385 448-602 (615)
110 1yfq_A Cell cycle arrest prote 99.7 5.4E-16 1.8E-20 174.4 17.9 175 2192-2385 112-311 (342)
111 3vu4_A KMHSV2; beta-propeller 99.7 6.1E-16 2.1E-20 180.7 17.3 162 2202-2385 118-324 (355)
112 3v7d_B Cell division control p 99.7 7.2E-16 2.4E-20 182.8 17.9 175 2194-2384 175-368 (464)
113 3odt_A Protein DOA1; ubiquitin 99.7 1.1E-15 3.9E-20 168.8 18.0 142 2221-2385 20-162 (313)
114 4gga_A P55CDC, cell division c 99.7 1.3E-15 4.5E-20 180.4 19.8 149 2215-2385 101-249 (420)
115 3jro_A Fusion protein of prote 99.7 6.2E-16 2.1E-20 198.9 17.4 176 2193-2385 22-226 (753)
116 2oit_A Nucleoporin 214KDA; NH2 99.6 3.3E-16 1.1E-20 190.0 13.0 144 2221-2383 94-257 (434)
117 3jro_A Fusion protein of prote 99.6 8.4E-16 2.9E-20 197.6 17.1 148 2221-2385 11-177 (753)
118 1yfq_A Cell cycle arrest prote 99.6 8.6E-16 2.9E-20 172.8 13.3 134 2221-2378 13-162 (342)
119 3vu4_A KMHSV2; beta-propeller 99.6 2.5E-15 8.6E-20 175.5 16.7 147 2222-2385 61-259 (355)
120 1p22_A F-BOX/WD-repeat protein 99.6 4.5E-15 1.5E-19 176.3 16.1 163 2193-2385 224-402 (435)
121 1p22_A F-BOX/WD-repeat protein 99.6 1.5E-14 5E-19 171.9 20.2 164 2193-2383 144-311 (435)
122 2ovr_B FBW7, F-BOX/WD repeat p 99.6 9.4E-15 3.2E-19 173.4 17.7 162 2194-2385 131-296 (445)
123 2ovr_B FBW7, F-BOX/WD repeat p 99.6 2.7E-14 9.4E-19 169.4 18.9 166 2192-2385 249-426 (445)
124 1l0q_A Surface layer protein; 99.5 1.4E-13 4.8E-18 158.9 18.2 139 2221-2382 33-173 (391)
125 3bws_A Protein LP49; two-domai 99.5 5.8E-14 2E-18 164.3 12.9 147 2223-2385 126-272 (433)
126 1l0q_A Surface layer protein; 99.5 8.4E-13 2.9E-17 152.4 19.0 142 2221-2385 75-218 (391)
127 2hqs_A Protein TOLB; TOLB, PAL 99.5 8.1E-13 2.8E-17 158.6 19.5 142 2221-2385 180-329 (415)
128 3bws_A Protein LP49; two-domai 99.5 5.1E-13 1.7E-17 156.4 16.9 142 2221-2382 171-318 (433)
129 2oit_A Nucleoporin 214KDA; NH2 99.4 2.9E-13 9.9E-18 164.4 10.1 153 2222-2385 39-211 (434)
130 1xfd_A DIP, dipeptidyl aminope 99.4 3.8E-13 1.3E-17 168.8 7.0 144 2223-2384 20-190 (723)
131 2ecf_A Dipeptidyl peptidase IV 99.3 2.6E-12 9E-17 162.0 13.1 145 2221-2384 38-226 (741)
132 2ojh_A Uncharacterized protein 99.3 5.4E-12 1.8E-16 136.9 13.4 144 2221-2383 43-189 (297)
133 2hqs_A Protein TOLB; TOLB, PAL 99.3 1.4E-11 4.6E-16 148.0 17.8 142 2221-2384 224-371 (415)
134 1xfd_A DIP, dipeptidyl aminope 99.3 4.9E-12 1.7E-16 158.8 12.9 145 2222-2383 63-271 (723)
135 2ojh_A Uncharacterized protein 99.3 9.9E-12 3.4E-16 134.8 13.3 146 2222-2384 131-289 (297)
136 3o4h_A Acylamino-acid-releasin 99.3 4.3E-12 1.5E-16 156.7 8.7 133 2223-2384 153-299 (582)
137 1nir_A Nitrite reductase; hemo 99.2 8.8E-11 3E-15 147.1 18.2 142 2222-2385 181-342 (543)
138 2ecf_A Dipeptidyl peptidase IV 99.2 1.1E-10 3.6E-15 147.5 18.5 213 39-290 37-324 (741)
139 1z68_A Fibroblast activation p 99.2 4.3E-12 1.5E-16 160.1 5.9 143 2222-2383 62-269 (719)
140 1nir_A Nitrite reductase; hemo 99.2 7.1E-11 2.4E-15 147.9 16.0 136 2226-2382 144-295 (543)
141 3scy_A Hypothetical bacterial 99.2 2.4E-10 8.2E-15 131.8 16.8 149 2221-2385 156-324 (361)
142 3vgz_A Uncharacterized protein 99.2 3.9E-10 1.3E-14 127.6 17.3 144 2223-2385 188-332 (353)
143 3hfq_A Uncharacterized protein 99.2 5.5E-10 1.9E-14 127.9 18.6 155 2222-2382 88-255 (347)
144 1z68_A Fibroblast activation p 99.2 2.5E-11 8.7E-16 153.1 8.3 137 2224-2384 20-186 (719)
145 1k32_A Tricorn protease; prote 99.1 1.1E-10 3.7E-15 155.3 14.0 142 2221-2383 339-488 (1045)
146 3vgz_A Uncharacterized protein 99.1 5.8E-10 2E-14 126.1 17.4 139 2222-2382 143-287 (353)
147 3u4y_A Uncharacterized protein 99.1 6.5E-10 2.2E-14 125.5 17.5 139 2225-2382 89-236 (331)
148 3hfq_A Uncharacterized protein 99.1 4.8E-10 1.6E-14 128.4 16.4 152 2221-2384 142-303 (347)
149 1ri6_A Putative isomerase YBHE 99.1 5.5E-10 1.9E-14 125.1 16.4 145 2222-2382 86-246 (343)
150 4a5s_A Dipeptidyl peptidase 4 99.1 5.5E-11 1.9E-15 152.4 8.5 141 2223-2383 20-187 (740)
151 3scy_A Hypothetical bacterial 99.1 1.2E-09 4.2E-14 126.0 18.3 141 2221-2375 212-360 (361)
152 1k32_A Tricorn protease; prote 99.1 2.6E-10 8.9E-15 151.7 14.6 143 2220-2382 379-572 (1045)
153 1ri6_A Putative isomerase YBHE 99.1 6.2E-10 2.1E-14 124.7 15.0 150 2222-2385 131-295 (343)
154 3u4y_A Uncharacterized protein 99.1 1.2E-09 4E-14 123.5 16.8 136 2226-2383 4-144 (331)
155 3o4h_A Acylamino-acid-releasin 99.1 2.4E-10 8.4E-15 141.2 10.5 134 2223-2383 113-262 (582)
156 2z3z_A Dipeptidyl aminopeptida 99.1 3.4E-10 1.2E-14 142.4 11.7 141 2221-2383 83-274 (706)
157 1jmx_B Amine dehydrogenase; ox 99.0 6.7E-10 2.3E-14 125.1 11.7 137 2225-2379 5-160 (349)
158 1jof_A Carboxy-CIS,CIS-muconat 99.0 2.2E-09 7.6E-14 125.5 15.8 148 2225-2384 88-272 (365)
159 2z3z_A Dipeptidyl aminopeptida 99.0 1.1E-09 3.7E-14 137.9 14.0 150 2220-2385 258-419 (706)
160 1pby_B Quinohemoprotein amine 99.0 2E-09 6.7E-14 120.4 13.8 139 2223-2383 85-296 (337)
161 1jof_A Carboxy-CIS,CIS-muconat 99.0 9.1E-10 3.1E-14 128.8 10.8 146 2223-2383 43-209 (365)
162 4a5s_A Dipeptidyl peptidase 4 98.9 2.7E-09 9.1E-14 137.0 14.1 139 2223-2382 65-275 (740)
163 1pby_B Quinohemoprotein amine 98.9 2.7E-09 9.1E-14 119.3 11.9 134 2232-2383 2-151 (337)
164 3azo_A Aminopeptidase; POP fam 98.9 2.3E-09 7.7E-14 134.0 10.4 146 2220-2383 130-310 (662)
165 3pe7_A Oligogalacturonate lyas 98.9 7.7E-09 2.6E-13 119.4 13.5 139 2225-2382 41-204 (388)
166 1jmx_B Amine dehydrogenase; ox 98.9 9E-09 3.1E-13 116.0 12.4 126 2222-2363 45-183 (349)
167 1q7f_A NHL, brain tumor CG1071 98.8 7.4E-08 2.5E-12 107.6 18.6 140 2222-2383 123-267 (286)
168 3fvz_A Peptidyl-glycine alpha- 98.8 1E-07 3.4E-12 110.5 19.9 144 2221-2383 25-213 (329)
169 2xdw_A Prolyl endopeptidase; a 98.8 3E-08 1E-12 126.6 15.2 146 2221-2382 126-301 (710)
170 2bkl_A Prolyl endopeptidase; m 98.8 1.8E-08 6.3E-13 128.4 12.7 142 2221-2379 122-283 (695)
171 3azo_A Aminopeptidase; POP fam 98.7 2.4E-08 8.1E-13 124.8 11.1 152 2225-2383 82-258 (662)
172 2gop_A Trilobed protease; beta 98.7 1.2E-07 4.1E-12 108.1 14.7 134 2222-2382 61-230 (347)
173 3pe7_A Oligogalacturonate lyas 98.7 1.3E-07 4.3E-12 109.4 14.1 140 2224-2382 85-253 (388)
174 3fvz_A Peptidyl-glycine alpha- 98.7 3.8E-07 1.3E-11 105.7 17.9 152 2222-2383 145-308 (329)
175 2oiz_A Aromatic amine dehydrog 98.6 2.8E-07 9.6E-12 109.2 15.9 90 2277-2380 259-361 (361)
176 1q7f_A NHL, brain tumor CG1071 98.6 6E-07 2.1E-11 100.3 16.9 140 2222-2384 79-224 (286)
177 2dg1_A DRP35, lactonase; beta 98.6 1.2E-06 4.1E-11 99.8 19.5 145 2222-2381 47-196 (333)
178 3c5m_A Oligogalacturonate lyas 98.5 5.3E-08 1.8E-12 111.9 5.9 141 2223-2382 39-204 (396)
179 1yr2_A Prolyl oligopeptidase; 98.5 7.8E-07 2.7E-11 114.5 15.2 145 2221-2382 164-331 (741)
180 2gop_A Trilobed protease; beta 98.5 1E-06 3.4E-11 100.5 13.8 133 2222-2384 17-187 (347)
181 2oiz_A Aromatic amine dehydrog 98.4 7.5E-07 2.6E-11 105.6 13.1 76 2224-2303 54-141 (361)
182 3e5z_A Putative gluconolactona 98.4 9.3E-07 3.2E-11 99.7 12.9 146 2222-2383 71-234 (296)
183 3e5z_A Putative gluconolactona 98.4 1.6E-06 5.6E-11 97.7 14.6 142 2223-2382 31-187 (296)
184 2dg1_A DRP35, lactonase; beta 98.4 5.5E-07 1.9E-11 102.6 9.8 139 2222-2384 8-152 (333)
185 3iuj_A Prolyl endopeptidase; h 98.4 1.8E-06 6E-11 110.9 14.5 142 2221-2380 130-293 (693)
186 1xip_A Nucleoporin NUP159; bet 98.3 1.6E-06 5.5E-11 105.9 12.8 131 2222-2384 90-231 (388)
187 3c5m_A Oligogalacturonate lyas 98.3 2.5E-06 8.6E-11 98.1 13.6 110 2221-2352 239-381 (396)
188 2xdw_A Prolyl endopeptidase; a 98.3 6.4E-06 2.2E-10 105.3 17.2 146 2222-2383 173-352 (710)
189 2bkl_A Prolyl endopeptidase; m 98.3 6.5E-06 2.2E-10 105.2 17.2 141 2223-2382 171-334 (695)
190 3no2_A Uncharacterized protein 98.3 3.2E-06 1.1E-10 97.3 12.1 131 2230-2383 4-141 (276)
191 1rwi_B Serine/threonine-protei 98.3 8.4E-06 2.9E-10 89.7 14.7 140 2222-2383 110-250 (270)
192 1xip_A Nucleoporin NUP159; bet 98.2 5.9E-06 2E-10 101.0 14.0 131 2221-2378 39-174 (388)
193 3no2_A Uncharacterized protein 98.2 1.6E-05 5.4E-10 91.5 16.3 157 2198-2384 19-182 (276)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 98.2 1.1E-05 3.9E-10 90.4 13.4 142 2221-2380 118-281 (314)
195 3g4e_A Regucalcin; six bladed 98.1 3E-05 1E-09 88.7 16.5 144 2220-2380 98-255 (297)
196 1rwi_B Serine/threonine-protei 98.1 1.9E-05 6.5E-10 86.9 13.1 139 2223-2383 70-208 (270)
197 2z2n_A Virginiamycin B lyase; 98.0 0.00015 5.2E-09 80.1 17.5 140 2221-2383 100-241 (299)
198 2qe8_A Uncharacterized protein 98.0 6.6E-05 2.2E-09 87.9 15.2 146 2222-2381 19-209 (343)
199 1qks_A Cytochrome CD1 nitrite 98.0 0.00014 4.6E-09 92.7 19.0 142 2222-2385 199-360 (567)
200 1qks_A Cytochrome CD1 nitrite 97.9 9E-05 3.1E-09 94.3 17.1 128 2229-2377 165-308 (567)
201 2ghs_A AGR_C_1268P; regucalcin 97.9 0.00014 4.9E-09 84.6 17.3 144 2220-2381 134-286 (326)
202 2z2n_A Virginiamycin B lyase; 97.9 0.0002 6.8E-09 79.2 17.5 139 2221-2383 142-282 (299)
203 3g4e_A Regucalcin; six bladed 97.9 0.00019 6.5E-09 82.0 16.8 146 2221-2382 55-214 (297)
204 3dsm_A Uncharacterized protein 97.9 0.0001 3.4E-09 85.9 14.7 145 2222-2382 86-240 (328)
205 1yr2_A Prolyl oligopeptidase; 97.8 0.00015 5.3E-09 93.5 15.2 138 2223-2375 212-372 (741)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.00031 1.1E-08 78.8 15.6 114 2223-2351 175-297 (314)
207 3dsm_A Uncharacterized protein 97.7 0.00044 1.5E-08 80.6 17.0 126 2223-2365 175-311 (328)
208 3iuj_A Prolyl endopeptidase; h 97.7 0.00024 8.2E-09 91.3 15.9 143 2223-2383 178-342 (693)
209 2qc5_A Streptogramin B lactona 97.6 0.0013 4.5E-08 72.7 17.8 141 2221-2383 105-246 (300)
210 2ghs_A AGR_C_1268P; regucalcin 97.6 0.00072 2.5E-08 78.7 16.1 144 2222-2382 92-245 (326)
211 2qc5_A Streptogramin B lactona 97.6 0.0013 4.5E-08 72.7 17.4 139 2222-2382 22-161 (300)
212 2qe8_A Uncharacterized protein 97.5 0.00067 2.3E-08 79.4 13.8 153 2222-2385 122-309 (343)
213 3hrp_A Uncharacterized protein 97.4 0.0012 4.1E-08 80.2 15.8 143 2225-2383 176-339 (409)
214 3hrp_A Uncharacterized protein 97.4 0.0015 5E-08 79.5 16.5 140 2223-2383 222-396 (409)
215 3dr2_A Exported gluconolactona 97.4 0.002 6.8E-08 73.8 16.1 138 2223-2381 48-202 (305)
216 3dr2_A Exported gluconolactona 97.3 0.00075 2.6E-08 77.3 11.3 135 2223-2381 134-291 (305)
217 3sjl_D Methylamine dehydrogena 97.2 0.0019 6.6E-08 79.1 13.8 117 2226-2363 39-177 (386)
218 2xe4_A Oligopeptidase B; hydro 97.2 0.00088 3E-08 87.4 11.5 115 2221-2352 175-303 (751)
219 2hz6_A Endoplasmic reticulum t 96.8 0.00075 2.6E-08 80.5 4.7 122 2231-2379 92-216 (369)
220 2hz6_A Endoplasmic reticulum t 96.7 0.00026 8.8E-09 84.5 -0.4 63 2230-2304 8-70 (369)
221 2mad_H Methylamine dehydrogena 96.6 0.013 4.4E-07 70.6 13.5 113 2227-2361 28-162 (373)
222 2mad_H Methylamine dehydrogena 96.5 0.02 6.9E-07 68.9 14.4 112 2224-2351 70-194 (373)
223 1kb0_A Quinohemoprotein alcoho 96.5 0.012 4.2E-07 76.2 13.1 127 2226-2365 319-517 (677)
224 3c75_H MADH, methylamine dehyd 96.1 0.029 9.9E-07 69.6 12.9 114 2229-2363 82-217 (426)
225 1fwx_A Nitrous oxide reductase 96.1 0.0089 3E-07 76.9 8.6 130 2241-2386 254-407 (595)
226 1mda_H Methylamine dehydrogena 96.1 0.015 5.1E-07 70.7 10.2 100 2233-2351 34-156 (368)
227 1yiq_A Quinohemoprotein alcoho 96.0 0.031 1.1E-06 72.6 13.3 167 2199-2379 280-530 (689)
228 2ece_A 462AA long hypothetical 95.9 0.029 9.9E-07 70.3 12.0 146 2223-2386 141-340 (462)
229 3sjl_D Methylamine dehydrogena 95.8 0.032 1.1E-06 68.6 11.7 76 2225-2303 83-170 (386)
230 2ece_A 462AA long hypothetical 95.8 0.062 2.1E-06 67.5 13.9 145 2229-2385 93-271 (462)
231 2fp8_A Strictosidine synthase; 95.3 0.27 9.1E-06 56.7 16.1 143 2223-2383 83-245 (322)
232 2iwa_A Glutamine cyclotransfer 94.8 0.28 9.5E-06 57.6 14.7 119 2222-2363 23-143 (266)
233 2xe4_A Oligopeptidase B; hydro 94.8 0.28 9.6E-06 64.3 16.3 100 2224-2336 225-336 (751)
234 1npe_A Nidogen, entactin; glyc 94.8 1.2 4E-05 50.0 19.0 141 2222-2381 38-181 (267)
235 3c75_H MADH, methylamine dehyd 94.2 0.16 5.4E-06 63.1 11.2 126 2225-2362 270-409 (426)
236 3nol_A Glutamine cyclotransfer 94.1 0.31 1.1E-05 57.3 12.7 115 2222-2362 45-162 (262)
237 1kb0_A Quinohemoprotein alcoho 93.8 0.095 3.3E-06 68.0 8.6 79 2241-2336 457-536 (677)
238 3hxj_A Pyrrolo-quinoline quino 93.8 0.45 1.5E-05 53.7 13.0 113 2223-2364 140-252 (330)
239 1yiq_A Quinohemoprotein alcoho 93.7 0.1 3.5E-06 67.9 8.6 79 2240-2335 454-533 (689)
240 1mda_H Methylamine dehydrogena 93.5 0.17 5.8E-06 61.6 9.6 86 2225-2327 269-365 (368)
241 3nok_A Glutaminyl cyclase; bet 93.5 0.75 2.6E-05 54.3 14.6 116 2222-2363 57-172 (268)
242 2iwa_A Glutamine cyclotransfer 93.5 0.97 3.3E-05 53.0 15.6 136 2225-2385 71-224 (266)
243 2fp8_A Strictosidine synthase; 93.5 1.1 3.7E-05 51.7 15.8 134 2222-2374 128-291 (322)
244 1fwx_A Nitrous oxide reductase 93.3 0.12 4.2E-06 66.6 8.3 117 2223-2351 280-429 (595)
245 1k3i_A Galactose oxidase precu 92.5 0.38 1.3E-05 61.8 11.1 116 2224-2351 190-321 (656)
246 3hxj_A Pyrrolo-quinoline quino 92.4 1 3.6E-05 50.7 13.3 130 2223-2381 180-309 (330)
247 3tc9_A Hypothetical hydrolase; 92.3 1.9 6.6E-05 52.9 16.5 138 2223-2381 140-284 (430)
248 1npe_A Nidogen, entactin; glyc 91.8 2.8 9.5E-05 46.9 15.8 137 2223-2382 125-266 (267)
249 2p4o_A Hypothetical protein; p 91.8 2.6 8.8E-05 48.5 15.8 109 2223-2351 35-145 (306)
250 3mbr_X Glutamine cyclotransfer 90.3 4.3 0.00015 47.3 15.8 117 2222-2363 23-141 (243)
251 3nol_A Glutamine cyclotransfer 90.3 1.5 5.2E-05 51.6 12.1 129 2232-2385 98-243 (262)
252 4hw6_A Hypothetical protein, I 89.9 2.9 0.0001 51.5 14.8 137 2223-2380 142-286 (433)
253 3nok_A Glutaminyl cyclase; bet 89.4 3.2 0.00011 49.1 13.8 131 2225-2381 101-249 (268)
254 2xbg_A YCF48-like protein; pho 88.9 22 0.00077 41.6 20.7 148 96-283 164-319 (327)
255 4hw6_A Hypothetical protein, I 88.7 5.9 0.0002 48.9 16.3 125 2223-2364 231-381 (433)
256 3a9g_A Putative uncharacterize 88.6 2.7 9.4E-05 50.3 13.0 107 2223-2338 32-153 (354)
257 2ad6_A Methanol dehydrogenase 88.5 2.7 9.2E-05 53.7 13.5 126 2226-2364 308-503 (571)
258 1kv9_A Type II quinohemoprotei 88.0 2.1 7.3E-05 55.5 12.3 154 2198-2365 274-498 (668)
259 3mbr_X Glutamine cyclotransfer 87.9 4.2 0.00014 47.4 13.3 126 2231-2381 75-218 (243)
260 3qqz_A Putative uncharacterize 87.1 15 0.00051 42.9 17.4 148 2223-2382 73-239 (255)
261 4a2l_A BT_4663, two-component 87.1 18 0.00062 47.2 20.2 145 2217-2380 354-511 (795)
262 1flg_A Protein (quinoprotein e 87.0 3.5 0.00012 52.9 13.2 124 2229-2365 331-526 (582)
263 2ism_A Putative oxidoreductase 86.8 2.4 8.2E-05 50.6 10.9 107 2223-2338 34-153 (352)
264 3q7m_A Lipoprotein YFGL, BAMB; 86.3 5.8 0.0002 46.3 13.6 117 2231-2363 53-170 (376)
265 2p4o_A Hypothetical protein; p 86.1 14 0.00046 42.6 16.3 143 2222-2381 74-226 (306)
266 1ijq_A LDL receptor, low-densi 86.0 16 0.00055 42.6 17.1 139 2223-2380 33-177 (316)
267 3q7m_A Lipoprotein YFGL, BAMB; 85.9 5.1 0.00018 46.8 12.9 112 2231-2369 239-351 (376)
268 3v65_B Low-density lipoprotein 85.6 14 0.00047 44.6 16.7 138 2222-2380 118-259 (386)
269 3tc9_A Hypothetical hydrolase; 85.5 4.4 0.00015 49.8 12.6 111 2222-2351 181-299 (430)
270 1cru_A Protein (soluble quinop 85.3 13 0.00046 46.2 16.9 113 2223-2338 30-162 (454)
271 4a2l_A BT_4663, two-component 85.2 14 0.00049 48.2 17.8 140 2220-2380 406-556 (795)
272 2xbg_A YCF48-like protein; pho 84.7 11 0.00038 44.2 15.0 106 2223-2350 125-231 (327)
273 3p5b_L Low density lipoprotein 83.9 25 0.00085 42.7 18.0 139 2222-2380 114-259 (400)
274 1tl2_A L10, protein (tachylect 83.5 3 0.0001 48.5 9.2 140 2223-2379 44-194 (236)
275 2ad6_A Methanol dehydrogenase 83.3 1.8 6.1E-05 55.3 8.1 82 2239-2337 442-524 (571)
276 3v64_C Agrin; beta propeller, 83.3 16 0.00056 43.4 15.8 137 2222-2379 75-215 (349)
277 2g8s_A Glucose/sorbosone dehyd 83.2 14 0.00049 44.1 15.3 108 2223-2338 21-148 (353)
278 2p9w_A MAL S 1 allergenic prot 83.0 11 0.00037 45.9 14.1 143 2225-2381 18-199 (334)
279 3pbp_A Nucleoporin NUP82; beta 82.7 24 0.00082 44.5 17.2 144 2223-2378 24-191 (452)
280 3das_A Putative oxidoreductase 81.3 13 0.00043 45.3 14.0 111 2223-2338 35-158 (347)
281 3v64_C Agrin; beta propeller, 81.3 29 0.00098 41.3 16.8 111 2223-2351 119-232 (349)
282 3qqz_A Putative uncharacterize 81.2 20 0.00069 41.8 15.1 111 2213-2337 21-138 (255)
283 3v9f_A Two-component system se 81.0 24 0.00083 46.0 17.4 141 2217-2381 360-509 (781)
284 3mkq_B Coatomer subunit alpha; 81.0 2.7 9.1E-05 47.0 7.3 96 1225-1363 34-129 (177)
285 3kya_A Putative phosphatase; s 78.8 35 0.0012 43.5 17.2 146 2223-2380 142-323 (496)
286 1kv9_A Type II quinohemoprotei 74.7 4.6 0.00016 52.5 8.0 82 2237-2335 434-516 (668)
287 3m0c_C LDL receptor, low-densi 74.7 43 0.0015 44.8 17.2 138 2222-2379 426-570 (791)
288 3v9f_A Two-component system se 74.6 52 0.0018 42.9 17.7 140 2219-2380 406-552 (781)
289 3sov_A LRP-6, low-density lipo 74.0 38 0.0013 40.0 14.9 139 2222-2379 37-178 (318)
290 1ijq_A LDL receptor, low-densi 73.7 86 0.003 36.5 17.7 121 2223-2363 123-246 (316)
291 1flg_A Protein (quinoprotein e 73.2 5.1 0.00018 51.4 7.8 81 2239-2336 464-546 (582)
292 1w6s_A Methanol dehydrogenase 72.2 23 0.00077 45.9 13.4 122 2229-2364 318-512 (599)
293 3sre_A PON1, serum paraoxonase 71.8 64 0.0022 39.3 16.4 141 2223-2380 115-280 (355)
294 3p5b_L Low density lipoprotein 70.8 1.2E+02 0.0041 36.8 18.6 110 2223-2351 162-275 (400)
295 3sov_A LRP-6, low-density lipo 68.8 1.4E+02 0.0047 35.3 18.0 110 2223-2351 82-195 (318)
296 3a9g_A Putative uncharacterize 67.1 19 0.00064 43.2 10.4 106 2223-2336 76-214 (354)
297 1k3i_A Galactose oxidase precu 65.9 23 0.00079 45.5 11.5 70 2276-2351 190-272 (656)
298 3v65_B Low-density lipoprotein 65.8 97 0.0033 37.3 16.3 120 2223-2364 205-327 (386)
299 2ism_A Putative oxidoreductase 64.9 18 0.00062 43.1 9.6 109 2223-2336 78-219 (352)
300 4a0p_A LRP6, LRP-6, low-densit 64.0 1.4E+02 0.0048 38.8 18.2 137 2223-2379 40-178 (628)
301 3sre_A PON1, serum paraoxonase 64.0 50 0.0017 40.3 13.3 101 2222-2338 167-285 (355)
302 3kya_A Putative phosphatase; s 62.9 56 0.0019 41.7 13.9 115 2222-2351 188-339 (496)
303 3pbp_A Nucleoporin NUP82; beta 62.7 18 0.00061 45.7 9.2 84 40-126 67-157 (452)
304 3ei3_A DNA damage-binding prot 60.9 39 0.0013 47.2 12.9 64 109-178 46-117 (1158)
305 1tl2_A L10, protein (tachylect 60.5 63 0.0022 37.8 12.5 121 2223-2358 91-213 (236)
306 3m0c_C LDL receptor, low-densi 59.7 90 0.0031 41.9 15.6 118 2223-2362 474-595 (791)
307 2wg3_C Hedgehog-interacting pr 59.0 71 0.0024 40.2 13.8 114 2223-2339 17-158 (463)
308 2p9w_A MAL S 1 allergenic prot 57.7 52 0.0018 40.1 11.8 105 2240-2352 99-214 (334)
309 1cru_A Protein (soluble quinop 56.7 51 0.0017 41.1 11.9 63 2223-2291 80-163 (454)
310 1w6s_A Methanol dehydrogenase 54.7 21 0.0007 46.3 8.2 81 2239-2336 451-533 (599)
311 3s94_A LRP-6, low-density lipo 53.8 1.5E+02 0.0051 38.5 15.8 137 2223-2379 43-183 (619)
312 4gq2_M Nucleoporin NUP120; bet 52.7 38 0.0013 46.1 10.6 37 2222-2258 238-274 (950)
313 3s94_A LRP-6, low-density lipo 51.7 2.3E+02 0.0078 36.8 17.1 136 2222-2378 351-490 (619)
314 3amr_A 3-phytase; beta-propell 51.0 92 0.0031 38.3 12.5 103 2231-2352 40-161 (355)
315 1n7d_A LDL receptor, low-densi 48.1 46 0.0016 43.7 10.0 111 2223-2351 456-569 (699)
316 2g8s_A Glucose/sorbosone dehyd 47.6 65 0.0022 38.4 10.4 108 2223-2336 69-214 (353)
317 1n7d_A LDL receptor, low-densi 47.3 61 0.0021 42.5 11.0 120 2223-2362 499-621 (699)
318 3bg1_B Nucleoporin NUP145; NPC 42.1 36 0.0012 42.8 7.3 40 1321-1361 176-215 (442)
319 1xi4_A Clathrin heavy chain; a 40.4 2.5E+02 0.0086 40.6 15.4 88 1316-1410 1056-1159(1630)
320 4a0p_A LRP6, LRP-6, low-densit 38.2 6E+02 0.02 33.0 17.9 132 2223-2376 83-217 (628)
321 3ii7_A Kelch-like protein 7; p 37.7 1.7E+02 0.0059 33.1 11.5 107 2229-2351 54-176 (306)
322 4gq2_M Nucleoporin NUP120; bet 35.3 56 0.0019 44.5 8.1 32 2272-2303 236-267 (950)
323 3s25_A Hypothetical 7-bladed b 34.8 2E+02 0.0068 34.0 11.7 125 2225-2381 58-198 (302)
324 3amr_A 3-phytase; beta-propell 34.4 3.9E+02 0.013 33.0 14.3 126 2223-2363 131-272 (355)
325 2vpj_A Kelch-like protein 12; 33.8 5.2E+02 0.018 29.0 14.6 106 2230-2351 159-276 (301)
326 3uq3_A Heat shock protein STI1 28.2 1.2E+02 0.004 32.2 7.5 68 1462-1556 140-207 (258)
327 3das_A Putative oxidoreductase 27.3 1.1E+02 0.0038 37.2 8.0 62 2272-2336 32-100 (347)
328 3mzk_B Protein transport prote 26.1 80 0.0027 39.9 6.6 74 1332-1409 160-239 (441)
329 2xzh_A Clathrin heavy chain 1; 24.6 1.1E+03 0.037 29.3 17.2 127 2220-2369 67-202 (365)
330 4fhn_B Nucleoporin NUP120; pro 23.1 50 0.0017 45.8 4.4 35 2224-2258 242-276 (1139)
331 3zwu_A Alkaline phosphatase PH 22.5 1.9E+02 0.0066 37.7 9.3 56 2225-2289 481-548 (592)
332 1bpo_A Protein (clathrin); cla 22.0 1.4E+03 0.047 29.6 16.2 129 2220-2370 66-202 (494)
333 2xcb_A PCRH, regulatory protei 20.7 3.1E+02 0.01 27.3 8.6 89 1306-1409 15-110 (142)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.92 E-value=4.1e-20 Score=230.81 Aligned_cols=204 Identities=16% Similarity=0.198 Sum_probs=149.0
Q ss_pred ccccccccCCCCCCCccee---ecCCCCCCeEEEEecCCcEEEEeCCCCcccccccccccceeeeeccCCCCCeeEEEEc
Q 000080 27 FLRSEFIPTAPTRSTSTID---WLPDFAGYSWVAYGASSLLVISHFPSPLSQEEALIGPIFRQVFALSDNSLPVTSISWS 103 (2389)
Q Consensus 27 ~~~~~~ip~ap~~~~~ai~---wlpD~~G~~~vAYasg~~vVI~~l~SP~~~~e~~~~p~~~Qviegh~d~~dVk~VaWS 103 (2389)
+.+..++||.|.+.|+... |+|| | ..+||+++..+.+..+.+ + +.. .++.+|.+ .|++|+||
T Consensus 4 ~~~~~~~~~~~~~~~g~~~~~~~spd--g-~~l~~~~~~~v~l~~~~~---~-~~~------~~~~~h~~--~v~~~~~s 68 (611)
T 1nr0_A 4 FSQTALFPSLPRTARGTAVVLGNTPA--G-DKIQYCNGTSVYTVPVGS---L-TDT------EIYTEHSH--QTTVAKTS 68 (611)
T ss_dssp CEEEEEECCCCCCCTTCCCCCEECTT--S-SEEEEEETTEEEEEETTC---S-SCC------EEECCCSS--CEEEEEEC
T ss_pred cccccEECCCCCcccCceeEEeeCCC--C-CEEEeCCCCEEEEecCCC---c-ccC------eEecCCCC--ceEEEEEC
Confidence 3557899999999988654 7898 8 499999987555544322 2 223 67788877 89999999
Q ss_pred CCCCCCCcEEE-ecCCeEEEEeeCCCCCCCCccceeeEEe-cccceEEEEeecCCCCeEEEEecc------eEEeeccCC
Q 000080 104 PETPSIGQLAA-ASENCIFVFAHDSASSKGSFCWSQNAIL-VQGTKVEAIEWTGSGDGIVAGGME------TVLWKKKNT 175 (2389)
Q Consensus 104 Pd~~~~GeIaA-SyDntIRVw~~d~~~~kgd~~W~~~~tL-~hssTV~sIAWSpdG~rLaSggdD------V~IW~~~~s 175 (2389)
|+ +..||+ +.|++||||.... + ...+..++ .|+..|++|+|+|+|++||++|++ +.+|+.+..
T Consensus 69 pd---g~~lasg~~d~~v~lWd~~~----~--~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~ 139 (611)
T 1nr0_A 69 PS---GYYCASGDVHGNVRIWDTTQ----T--THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 139 (611)
T ss_dssp TT---SSEEEEEETTSEEEEEESSS----T--TCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB
T ss_pred CC---CcEEEEEeCCCCEEEeECCC----C--cceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCC
Confidence 97 444443 4689999998651 1 12233444 378999999999999999988863 778885432
Q ss_pred cEEEEEEeeccccceEEEEeecCCCc--eEeeecccccccCCCCCCCceeEEEeeCCCccceeecccCCCCeeEEEeccC
Q 000080 176 LWEIAWKFKENYPQNLVSATWSIEGP--SATAASMSQLDLLGPKEAGKCVFICCSDGKSEYIKLELCHPQPVSMVQWRPS 253 (2389)
Q Consensus 176 ~Wecvwt~~~~~~~~ivsvaWSpdG~--fATag~dikf~~~~~~~~~kpV~V~~~dg~~~~~~ve~aH~qdVn~V~W~Ps 253 (2389)
. .++. .|...+.+++|+|+|. +|||+.|.. |.+|.. ....+......|...|++|+|+|
T Consensus 140 ~----~~l~-gh~~~v~~v~f~p~~~~~l~s~s~D~~------------v~lwd~-~~~~~~~~l~~H~~~V~~v~fsp- 200 (611)
T 1nr0_A 140 N----GNLT-GQARAMNSVDFKPSRPFRIISGSDDNT------------VAIFEG-PPFKFKSTFGEHTKFVHSVRYNP- 200 (611)
T ss_dssp C----BCCC-CCSSCEEEEEECSSSSCEEEEEETTSC------------EEEEET-TTBEEEEEECCCSSCEEEEEECT-
T ss_pred c----ceec-CCCCCceEEEECCCCCeEEEEEeCCCe------------EEEEEC-CCCeEeeeeccccCceEEEEECC-
Confidence 2 2233 3567788999999985 999998744 445532 22224445678999999999999
Q ss_pred CCCCCCCCCccccCceEEeeecCCeEEEEEee
Q 000080 254 TRRHSPGDTKRSQRHVLLTCCLDGTVRLWCEM 285 (2389)
Q Consensus 254 ~~~~~~~Dgk~~~~nILAScSdDgTVRLW~e~ 285 (2389)
||+. |||+|.||+||||+..
T Consensus 201 -------dg~~-----las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 201 -------DGSL-----FASTGGDGTIVLYNGV 220 (611)
T ss_dssp -------TSSE-----EEEEETTSCEEEEETT
T ss_pred -------CCCE-----EEEEECCCcEEEEECC
Confidence 6555 9999999999999954
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.89 E-value=2.5e-18 Score=208.36 Aligned_cols=192 Identities=19% Similarity=0.332 Sum_probs=145.3
Q ss_pred CCCCCCCcceeecCCCCCCeEEEEecCCcEEEEeCCCCcccccccccccceeeeeccCCCCCeeEEEEcCCCCCCCcEEE
Q 000080 35 TAPTRSTSTIDWLPDFAGYSWVAYGASSLLVISHFPSPLSQEEALIGPIFRQVFALSDNSLPVTSISWSPETPSIGQLAA 114 (2389)
Q Consensus 35 ~ap~~~~~ai~wlpD~~G~~~vAYasg~~vVI~~l~SP~~~~e~~~~p~~~Qviegh~d~~dVk~VaWSPd~~~~GeIaA 114 (2389)
.+|+....+++|+|| | .++|.|+.+..|..| +. .+ +.+ +.+.+|.. .|++++|||| +..||+
T Consensus 13 ~GH~~~V~~~a~spd--g-~~las~~~d~~v~iW--d~-~~-~~~------~~l~gh~~--~V~~l~fspd---g~~las 74 (577)
T 2ymu_A 13 EAHSSSVRGVAFSPD--G-QTIASASDDKTVKLW--NR-NG-QLL------QTLTGHSS--SVWGVAFSPD---GQTIAS 74 (577)
T ss_dssp CCCSSCEEEEEECTT--S-SCEEEEETTSEEEEE--CT-TS-CEE------EEEECCSS--CEEEEEECTT---SSEEEE
T ss_pred CCCCCcEEEEEECCC--C-CEEEEEeCCCEEEEE--EC-CC-CEE------EEEeCCCC--CEEEEEECCC---CCEEEE
Confidence 378899999999999 8 599999999999999 63 22 344 77888876 8999999998 444553
Q ss_pred -ecCCeEEEEeeCCCCCCCCccceeeEEec-ccceEEEEeecCCCCeEEEEecc--eEEeeccCCcEEEEEEeeccccce
Q 000080 115 -ASENCIFVFAHDSASSKGSFCWSQNAILV-QGTKVEAIEWTGSGDGIVAGGME--TVLWKKKNTLWEIAWKFKENYPQN 190 (2389)
Q Consensus 115 -SyDntIRVw~~d~~~~kgd~~W~~~~tL~-hssTV~sIAWSpdG~rLaSggdD--V~IW~~~~s~Wecvwt~~~~~~~~ 190 (2389)
+.|++|+||... + .+..++. |...|++++|+|+|++|++++.| +++|+........ . ..+...
T Consensus 75 ~~~d~~i~vWd~~-----~----~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~---~-~~~~~~ 141 (577)
T 2ymu_A 75 ASDDKTVKLWNRN-----G----QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQT---L-TGHSSS 141 (577)
T ss_dssp EETTSCEEEEETT-----S----CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEE---E-CCCSSC
T ss_pred EeCCCEEEEEECC-----C----CEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeee---c-cCCCCc
Confidence 468999999854 1 1334453 78899999999999999999998 8899865433322 2 345567
Q ss_pred EEEEeecCCCc-eEeeecccccccCCCCCCCceeEEEeeCCCccceeecccCCCCeeEEEeccCCCCCCCCCCccccCce
Q 000080 191 LVSATWSIEGP-SATAASMSQLDLLGPKEAGKCVFICCSDGKSEYIKLELCHPQPVSMVQWRPSTRRHSPGDTKRSQRHV 269 (2389)
Q Consensus 191 ivsvaWSpdG~-fATag~dikf~~~~~~~~~kpV~V~~~dg~~~~~~ve~aH~qdVn~V~W~Ps~~~~~~~Dgk~~~~nI 269 (2389)
+..+.++|++. +++++.+.. +.++. ...........|...|.++.|+| ||+.
T Consensus 142 v~~~~~~~~~~~~~~~~~~~~------------~~~~~--~~~~~~~~~~~~~~~v~~~~~~~--------~~~~----- 194 (577)
T 2ymu_A 142 VWGVAFSPDGQTIASASDDKT------------VKLWN--RNGQLLQTLTGHSSSVWGVAFSP--------DGQT----- 194 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSE------------EEEEC--TTSCEEEEEECCSSCEEEEEECT--------TSSC-----
T ss_pred eeeeeeecCCccceecccccc------------eeccc--cceeeeeeccCCCcceeeeeecC--------CCCE-----
Confidence 78889999999 888877533 12221 12223344568999999999999 5555
Q ss_pred EEeeecCCeEEEEEe
Q 000080 270 LLTCCLDGTVRLWCE 284 (2389)
Q Consensus 270 LAScSdDgTVRLW~e 284 (2389)
|+|++.||+|+||+.
T Consensus 195 l~~~~~d~~v~~w~~ 209 (577)
T 2ymu_A 195 IASASDDKTVKLWNR 209 (577)
T ss_dssp EEEEETTSEEEEECT
T ss_pred EEEEcCCCEEEEEeC
Confidence 999999999999983
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.88 E-value=5.3e-22 Score=228.91 Aligned_cols=171 Identities=12% Similarity=0.080 Sum_probs=144.9
Q ss_pred ccceeeccccccccccccccCCCC----cCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPPAT----VENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPP 2268 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~at----v~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~ 2268 (2389)
..+|+| +.+...++|+....... ...-.|.+++|+|+|++||+|+.|++|++||+.+++++.++.
T Consensus 135 ~~l~~g-~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~---------- 203 (321)
T 3ow8_A 135 QYLATG-THVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE---------- 203 (321)
T ss_dssp SEEEEE-CTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC----------
T ss_pred CEEEEE-cCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc----------
Confidence 455666 66666666665322111 112356999999999999999999999999999999988874
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEE
Q 000080 2269 YALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVV 2348 (2389)
Q Consensus 2269 GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrL 2348 (2389)
+|...|++++|+|||++||+|+.||+|++||++++ ....++.+|...|.+++|+| +|++|||+ +.|++|+|
T Consensus 204 ~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~-----~~~~~~~~h~~~v~~~~~sp-~~~~l~s~---s~D~~v~i 274 (321)
T 3ow8_A 204 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-----NLAGTLSGHASWVLNVAFCP-DDTHFVSS---SSDKSVKV 274 (321)
T ss_dssp CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC-----CEEEEECCCSSCEEEEEECT-TSSEEEEE---ETTSCEEE
T ss_pred ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc-----ceeEEEcCCCCceEEEEECC-CCCEEEEE---eCCCcEEE
Confidence 46688999999999999999999999999999976 35678899999999999999 99999997 48999999
Q ss_pred eeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2349 WDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2349 WD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
||+ .++++++++.+|.+.|++++++++|++++|-+
T Consensus 275 wd~--~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 275 WDV--GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp EET--TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EeC--CCCEEEEEEcCCCCcEEEEEECCCCCEEEEEe
Confidence 998 57788999999999999999999999888754
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.87 E-value=2.1e-21 Score=227.83 Aligned_cols=170 Identities=14% Similarity=0.089 Sum_probs=138.5
Q ss_pred ccceeeccccccccccccccCCCC--c------CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPPAT--V------ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAAN 2264 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~at--v------~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~ 2264 (2389)
+..++| +.|.+.++|+....... . +.-.|++|+|+|||++|||||.|++|++||+.+++++.++.
T Consensus 94 ~~l~~~-s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~------ 166 (344)
T 4gqb_B 94 RGILVA-SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR------ 166 (344)
T ss_dssp TEEEEE-ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC------
T ss_pred CeEEEE-ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc------
Confidence 456677 78888999987533211 1 12357999999999999999999999999999999999884
Q ss_pred CCCCCCCCCEEEEEECCCC-CEEEEEeCCCcEEEeeCCCCCccCcccceee--eecCCCeeEEEEecCCCCEEEEeecCC
Q 000080 2265 VPPPYALASISALQFDHYG-HRFASAALDGTVCTWQLEVGGRSNVRPMESC--LCFSSHAMDVSYITSSGSVIAAAGHSS 2341 (2389)
Q Consensus 2265 ~p~~GH~~~V~sVaFSPDG-~~LASgS~DgTVkLWDl~tggrs~~k~l~tl--~gHs~~V~sVAFSP~DGslLASAG~sS 2341 (2389)
||.+.|++++|+|+| +.||||+.||+|++||++++. +...+ ..|...+.+++|+|+++++||+| +
T Consensus 167 ----~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg---~ 234 (344)
T 4gqb_B 167 ----AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK-----PASQIGCSAPGYLPTSLAWHPQQSEVFVFG---D 234 (344)
T ss_dssp ----CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS-----CEEECC----CCCEEEEEECSSCTTEEEEE---E
T ss_pred ----CcCCceEEEEecCCCCCceeeeccccccccccccccc-----eeeeeecceeeccceeeeecCCCCcceEEe---c
Confidence 577999999999999 578999999999999999862 34333 45667899999999778899986 5
Q ss_pred CCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccch-hhhc
Q 000080 2342 NGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLN-FALS 2383 (2389)
Q Consensus 2342 ~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~-~~~s 2383 (2389)
.|++|+|||+ .++++++++.+|.+.|++++++|+|. +++|
T Consensus 235 ~dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~fsp~g~~~las 275 (344)
T 4gqb_B 235 ENGTVSLVDT--KSTSCVLSSAVHSQCVTGLVFSPHSVPFLAS 275 (344)
T ss_dssp TTSEEEEEES--CC--CCEEEECCSSCEEEEEECSSSSCCEEE
T ss_pred cCCcEEEEEC--CCCcEEEEEcCCCCCEEEEEEccCCCeEEEE
Confidence 8999999998 57888999999999999999999985 4544
No 5
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.87 E-value=1.6e-21 Score=225.82 Aligned_cols=176 Identities=14% Similarity=0.112 Sum_probs=144.4
Q ss_pred cccceeeccccccccccccccCC----C---CcCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCc--eeeEecccCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDPP----A---TVENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDK--ATATYGVLPA 2262 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~----a---tv~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk--~l~Tl~vl~g 2262 (2389)
..++|+| +.|.+.++|+..... . .-+.-.|++|+|+|+|++||+||.|++|+|||+.++. ++.++.
T Consensus 28 g~~las~-~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~---- 102 (345)
T 3fm0_A 28 GTLLASC-GGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE---- 102 (345)
T ss_dssp SSCEEEE-ETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC----
T ss_pred CCEEEEE-cCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc----
Confidence 4578888 899999999875321 0 1122357999999999999999999999999998774 455653
Q ss_pred CCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCC
Q 000080 2263 ANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSN 2342 (2389)
Q Consensus 2263 h~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~ 2342 (2389)
||...|++|+|+|||++||+|+.|++|++||++++. ....+..+.+|...|.+++|+| +|++||++ +.
T Consensus 103 ------~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~---s~ 170 (345)
T 3fm0_A 103 ------GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED--EYECVSVLNSHTQDVKHVVWHP-SQELLASA---SY 170 (345)
T ss_dssp ------CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS--CEEEEEEECCCCSCEEEEEECS-SSSCEEEE---ET
T ss_pred ------CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC--CeEEEEEecCcCCCeEEEEECC-CCCEEEEE---eC
Confidence 567899999999999999999999999999998753 2245677889999999999999 99999997 48
Q ss_pred CCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhcc
Q 000080 2343 GINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2343 D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
|++|+|||+......++..+.+|.+.|++++++|+|++.+|-
T Consensus 171 d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 171 DDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASC 212 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 999999997321113568899999999999999999988764
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.87 E-value=1.5e-21 Score=221.80 Aligned_cols=143 Identities=11% Similarity=0.141 Sum_probs=127.3
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.|++|+|||+|++||||+.|++|+|||+.+++++.++. +|...|++++|+|+|++||+|+.|++|++||+
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ----------VTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE----------CCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee----------ccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 46999999999999999999999999999999988874 35688999999999999999999999999999
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCC-CceEEEEeecCcEEEEeecc-cc
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPT-SSRASITCHEGLYDLFLPLK-LL 2378 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg-~~v~sL~GH~~~V~svA~~~-~~ 2378 (2389)
+++ +.+.++.+|...|++++|+| +|++|||| +.|++|+|||+. ++ ...+.+.+|...|.+++++| ++
T Consensus 85 ~~~-----~~~~~~~~h~~~v~~~~~~~-~~~~l~sg---s~D~~v~lWd~~--~~~~~~~~~~~h~~~v~~v~~~p~~~ 153 (304)
T 2ynn_A 85 NTG-----EKVVDFEAHPDYIRSIAVHP-TKPYVLSG---SDDLTVKLWNWE--NNWALEQTFEGHEHFVMCVAFNPKDP 153 (304)
T ss_dssp TTC-----CEEEEEECCSSCEEEEEECS-SSSEEEEE---ETTSCEEEEEGG--GTTEEEEEECCCCSCEEEEEECTTCT
T ss_pred CCC-----cEEEEEeCCCCcEEEEEEcC-CCCEEEEE---CCCCeEEEEECC--CCcchhhhhcccCCcEEEEEECCCCC
Confidence 987 46788899999999999999 89999997 599999999983 34 34678999999999999999 56
Q ss_pred hhhhcc
Q 000080 2379 NFALSK 2384 (2389)
Q Consensus 2379 ~~~~s~ 2384 (2389)
+..+|-
T Consensus 154 ~~l~sg 159 (304)
T 2ynn_A 154 STFASG 159 (304)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 666554
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.86 E-value=1.9e-20 Score=216.89 Aligned_cols=213 Identities=18% Similarity=0.345 Sum_probs=158.1
Q ss_pred CCCCCCCcceeecCCCCCCeEEEEecCCcEEEEeCCCCcccccccccccceeeeeccCCCCCeeEEEEcCCCCCCCcEEE
Q 000080 35 TAPTRSTSTIDWLPDFAGYSWVAYGASSLLVISHFPSPLSQEEALIGPIFRQVFALSDNSLPVTSISWSPETPSIGQLAA 114 (2389)
Q Consensus 35 ~ap~~~~~ai~wlpD~~G~~~vAYasg~~vVI~~l~SP~~~~e~~~~p~~~Qviegh~d~~dVk~VaWSPd~~~~GeIaA 114 (2389)
.+|+....+++|+|| | ..+|.|+.+..|..| +.....+. -..+.+.+|.. +|.+++|+|+ +..||+
T Consensus 102 ~~h~~~v~~v~~sp~--~-~~l~s~s~D~~v~iw--d~~~~~~~----~~~~~~~~h~~--~v~~~~~~p~---~~~l~s 167 (345)
T 3fm0_A 102 EGHENEVKSVAWAPS--G-NLLATCSRDKSVWVW--EVDEEDEY----ECVSVLNSHTQ--DVKHVVWHPS---QELLAS 167 (345)
T ss_dssp CCCSSCEEEEEECTT--S-SEEEEEETTSCEEEE--EECTTSCE----EEEEEECCCCS--CEEEEEECSS---SSCEEE
T ss_pred cCCCCCceEEEEeCC--C-CEEEEEECCCeEEEE--ECCCCCCe----EEEEEecCcCC--CeEEEEECCC---CCEEEE
Confidence 467788899999998 7 588888888888888 42222110 11256667765 8999999997 555654
Q ss_pred -ecCCeEEEEeeCCCCCCCCccceeeEEec-ccceEEEEeecCCCCeEEEEecc--eEEeec-------------cCCcE
Q 000080 115 -ASENCIFVFAHDSASSKGSFCWSQNAILV-QGTKVEAIEWTGSGDGIVAGGME--TVLWKK-------------KNTLW 177 (2389)
Q Consensus 115 -SyDntIRVw~~d~~~~kgd~~W~~~~tL~-hssTV~sIAWSpdG~rLaSggdD--V~IW~~-------------~~s~W 177 (2389)
+.|++|++|... ...|.+..++. |+..|++|+|+|+|++||+||.| |+||+. ....|
T Consensus 168 ~s~d~~i~~w~~~------~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~ 241 (345)
T 3fm0_A 168 ASYDDTVKLYREE------EDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241 (345)
T ss_dssp EETTSCEEEEEEE------TTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred EeCCCcEEEEEec------CCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence 578999999876 22577777775 89999999999999999999998 999984 13569
Q ss_pred EEEEEeeccccceEEEEeecCCCc-eEeeecccccccC---CCCCCCceeEEEeeCCCccceeecccCCCCeeEEEeccC
Q 000080 178 EIAWKFKENYPQNLVSATWSIEGP-SATAASMSQLDLL---GPKEAGKCVFICCSDGKSEYIKLELCHPQPVSMVQWRPS 253 (2389)
Q Consensus 178 ecvwt~~~~~~~~ivsvaWSpdG~-fATag~dikf~~~---~~~~~~kpV~V~~~dg~~~~~~ve~aH~qdVn~V~W~Ps 253 (2389)
+|+.++.+.|...+++++|+|+|. +||++++..++++ ...+...|.+.. ......+|..+|++|+|+|
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~-------~~~~~~~h~~~V~~v~~~p- 313 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSL-------TAHLHQAHSQDVNCVAWNP- 313 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEE-------EEEETTSSSSCEEEEEECS-
T ss_pred ceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEE-------EeeecccccCcEeEeEEeC-
Confidence 999988888888999999999988 9999997542222 111111111111 1123468999999999999
Q ss_pred CCCCCCCCCccccCceEEeeecCCeEEEEEeec
Q 000080 254 TRRHSPGDTKRSQRHVLLTCCLDGTVRLWCEMD 286 (2389)
Q Consensus 254 ~~~~~~~Dgk~~~~nILAScSdDgTVRLW~e~d 286 (2389)
+ ..++|||||+||+||||+...
T Consensus 314 -------~----~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 314 -------K----EPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp -------S----STTEEEEEETTSCEEEEEECC
T ss_pred -------C----CceEEEEcCCCCcEEEEEecC
Confidence 2 235799999999999999764
No 8
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.6e-21 Score=222.80 Aligned_cols=175 Identities=16% Similarity=0.160 Sum_probs=137.3
Q ss_pred ccceeeccccccccccccccC----CCCc----CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCC-------CceeeEe
Q 000080 2193 GIGASALGWETQDDFEDYVDP----PATV----ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGK-------DKATATY 2257 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~----~atv----~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~t-------Gk~l~Tl 2257 (2389)
+++|+| +.|.+.++|+.... ..++ +.-.|++|+|+|+|++||+||.|++|+|||+.. .+++.++
T Consensus 25 ~~las~-~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 103 (330)
T 2hes_X 25 GILATG-STDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAII 103 (330)
T ss_dssp TEEEEE-ESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEE
T ss_pred CEEEEE-cCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEE
Confidence 388898 88999999877431 1111 234679999999999999999999999999853 2345555
Q ss_pred cccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEe
Q 000080 2258 GVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAA 2337 (2389)
Q Consensus 2258 ~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASA 2337 (2389)
. ||...|++|+|+|||++||+|+.|++|++||++..+. ..+++..+.+|...|.+++|+| +|++|||+
T Consensus 104 ~----------~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~-~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~ 171 (330)
T 2hes_X 104 E----------GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE-EYECISVLQEHSQDVKHVIWHP-SEALLASS 171 (330)
T ss_dssp C--------------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC-CCEEEEEECCCSSCEEEEEECS-SSSEEEEE
T ss_pred c----------CCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC-CeEEEEEeccCCCceEEEEECC-CCCEEEEE
Confidence 2 5778999999999999999999999999999964321 2245677889999999999999 99999997
Q ss_pred ecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeeccc--chhhhc
Q 000080 2338 GHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKL--LNFALS 2383 (2389)
Q Consensus 2338 G~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~--~~~~~s 2383 (2389)
+.|++|||||+.....++++.+.+|.+.|++++++|+ +.+++|
T Consensus 172 ---s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 216 (330)
T 2hes_X 172 ---SYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCS 216 (330)
T ss_dssp ---ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEE
T ss_pred ---cCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEE
Confidence 4899999999742222578999999999999999998 555555
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.86 E-value=4.4e-21 Score=221.30 Aligned_cols=169 Identities=17% Similarity=0.204 Sum_probs=139.6
Q ss_pred ceeeccccccccccccccC--CCCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCC
Q 000080 2195 GASALGWETQDDFEDYVDP--PATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYA 2270 (2389)
Q Consensus 2195 ~Asg~~~d~~~~~~~~~d~--~atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH 2270 (2389)
.+++ +.|.+.++|+.... ..++ +.-.|.+++|+|++++|+||+.|++|++||+.+++++.++. +|
T Consensus 157 l~s~-s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~----------~h 225 (340)
T 1got_B 157 IVTS-SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT----------GH 225 (340)
T ss_dssp EEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC----------CC
T ss_pred EEEE-ECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc----------CC
Confidence 5566 67777888876321 1111 12357999999999999999999999999999999998884 46
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeee--ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEE
Q 000080 2271 LASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCL--CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVV 2348 (2389)
Q Consensus 2271 ~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~--gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrL 2348 (2389)
...|++|+|+|+|+.||+|+.||+|++||++++ +++.++. .+...|.+++|+| +|++||+| +.|++|+|
T Consensus 226 ~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g---~~d~~i~v 296 (340)
T 1got_B 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRAD-----QELMTYSHDNIICGITSVSFSK-SGRLLLAG---YDDFNCNV 296 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-----EEEEEECCTTCCSCEEEEEECT-TSSEEEEE---ETTSEEEE
T ss_pred cCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC-----cEEEEEccCCcccceEEEEECC-CCCEEEEE---CCCCeEEE
Confidence 788999999999999999999999999999975 2333332 3445799999999 99999997 48999999
Q ss_pred eeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2349 WDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2349 WD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
||+ .+++.+..+.+|.+.|.+++++|+|++.+|-.
T Consensus 297 wd~--~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 297 WDA--LKADRAGVLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp EET--TTCCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred EEc--ccCcEeeEeecCCCcEEEEEEcCCCCEEEEEc
Confidence 998 46778899999999999999999999887743
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.86 E-value=6.1e-21 Score=226.75 Aligned_cols=173 Identities=17% Similarity=0.168 Sum_probs=149.2
Q ss_pred cccceeeccccccccccccccC--CCCcC--ceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDP--PATVE--NISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPP 2267 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~--~atv~--ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~ 2267 (2389)
+.++|+| +.|.+.++|++... .+++. .-.|.+++|+|+|++|+|||.|++|++||+.+|+++.++.
T Consensus 162 ~~~l~sg-s~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~--------- 231 (410)
T 1vyh_C 162 GKLLASC-SADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--------- 231 (410)
T ss_dssp SSEEEEE-ETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE---------
T ss_pred CCEEEEE-eCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe---------
Confidence 3467888 88999999987422 22222 2367999999999999999999999999999999999884
Q ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCC-----------------
Q 000080 2268 PYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSS----------------- 2330 (2389)
Q Consensus 2268 ~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~D----------------- 2330 (2389)
||...|++++|+|||+.||+|+.||+|++||++++ .....+.+|...|.+++|+|+.
T Consensus 232 -~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 1vyh_C 232 -GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-----ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 305 (410)
T ss_dssp -CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-----CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred -CCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC-----ceeeEecCCCceEEEEEEcCcccccchhhhccccccccC
Confidence 46789999999999999999999999999999986 3567788999999999999931
Q ss_pred --CCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2331 --GSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2331 --GslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
|.+|||| +.|++|+|||+ .+++++.++.+|.+.|++++++|+|++++|-+
T Consensus 306 ~~g~~l~sg---s~D~~i~iwd~--~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 357 (410)
T 1vyh_C 306 KPGPFLLSG---SRDKTIKMWDV--STGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357 (410)
T ss_dssp --CCEEEEE---ETTSEEEEEET--TTTEEEEEEECCSSCEEEEEECSSSSCEEEEE
T ss_pred CCCCEEEEE---eCCCeEEEEEC--CCCceEEEEECCCCcEEEEEEcCCCCEEEEEe
Confidence 6789997 58999999998 57788999999999999999999999988754
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.86 E-value=5.9e-21 Score=218.86 Aligned_cols=175 Identities=13% Similarity=0.131 Sum_probs=147.9
Q ss_pred ccccccceeeccccccccccccccC-------CCCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecc
Q 000080 2189 PGYAGIGASALGWETQDDFEDYVDP-------PATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGV 2259 (2389)
Q Consensus 2189 ~g~~~~~Asg~~~d~~~~~~~~~d~-------~atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~v 2259 (2389)
|+...++|+| ++|.+.++|+.... ..++ +.-.|.+++|+|+|++|+|||.|++||+||+.+|+++.++.
T Consensus 27 ~~~~~~l~s~-s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~- 104 (319)
T 3frx_A 27 AGQPNLLLSA-SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV- 104 (319)
T ss_dssp SSCTTEEEEE-ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-
T ss_pred CCCccEEEEe-cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc-
Confidence 4455688999 99999999987421 1111 12357999999999999999999999999999999988884
Q ss_pred cCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecC-----CCCEE
Q 000080 2260 LPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITS-----SGSVI 2334 (2389)
Q Consensus 2260 l~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~-----DGslL 2334 (2389)
||...|++|+|+|+|+.|++|+.|++|++||++. +.+.++.+|...|.+++|+|. ++.+|
T Consensus 105 ---------~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l 169 (319)
T 3frx_A 105 ---------GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG------QCLATLLGHNDWVSQVRVVPNEKADDDSVTI 169 (319)
T ss_dssp ---------CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS------CEEEEECCCSSCEEEEEECCC------CCEE
T ss_pred ---------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC------CeEEEEeccCCcEEEEEEccCCCCCCCccEE
Confidence 4678999999999999999999999999999974 356788899999999999983 34589
Q ss_pred EEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2335 AAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2335 ASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+++ +.|++|++||+ .+.+....+.+|.+.|++++++|+|++++|-+
T Consensus 170 ~s~---~~d~~i~~wd~--~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~ 215 (319)
T 3frx_A 170 ISA---GNDKMVKAWNL--NQFQIEADFIGHNSNINTLTASPDGTLIASAG 215 (319)
T ss_dssp EEE---ETTSCEEEEET--TTTEEEEEECCCCSCEEEEEECTTSSEEEEEE
T ss_pred EEE---eCCCEEEEEEC--CcchhheeecCCCCcEEEEEEcCCCCEEEEEe
Confidence 987 48999999998 45667889999999999999999999888754
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.86 E-value=4.1e-21 Score=221.53 Aligned_cols=171 Identities=12% Similarity=0.173 Sum_probs=146.3
Q ss_pred ccceeeccccccccccccccCC--CCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPP--ATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPP 2268 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~--atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~ 2268 (2389)
.+.|++ +.|.+.++|+..... .++ ....+.+++|+|+|++||+|+.|++|++||+.+++...++.
T Consensus 93 ~~l~s~-s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~---------- 161 (321)
T 3ow8_A 93 PIAASS-SLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD---------- 161 (321)
T ss_dssp SEEEEE-ETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE----------
T ss_pred CEEEEE-eCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec----------
Confidence 456777 888888888764221 111 12345789999999999999999999999999999887774
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEE
Q 000080 2269 YALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVV 2348 (2389)
Q Consensus 2269 GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrL 2348 (2389)
+|...|.+++|+|||++||+|+.||+|++||++++ +.+.++.+|...|++++|+| +|++|||+ +.|++|+|
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~-----~~~~~~~~h~~~v~~l~~sp-d~~~l~s~---s~dg~i~i 232 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG-----KLLHTLEGHAMPIRSLTFSP-DSQLLVTA---SDDGYIKI 232 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-----EEEEEECCCSSCCCEEEECT-TSCEEEEE---CTTSCEEE
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC-----cEEEEEcccCCceeEEEEcC-CCCEEEEE---cCCCeEEE
Confidence 24578999999999999999999999999999986 46788899999999999999 99999997 58999999
Q ss_pred eeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2349 WDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2349 WD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
||+ .+++++..+.+|.+.|.+++++|+|++++|-+
T Consensus 233 wd~--~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s 267 (321)
T 3ow8_A 233 YDV--QHANLAGTLSGHASWVLNVAFCPDDTHFVSSS 267 (321)
T ss_dssp EET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEC--CCcceeEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 998 46778899999999999999999999887754
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.86 E-value=4e-21 Score=228.29 Aligned_cols=144 Identities=19% Similarity=0.282 Sum_probs=132.4
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
+|++++|||++++|||||.|++|++||+.+|+.+.++. ||.+.|++|+|+|+|++||+|+.|++|++||+
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~----------~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK----------GHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC----------CCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe----------ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 45999999999999999999999999999999988884 57789999999999999999999999999999
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchh
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~ 2380 (2389)
+++ +++.++.+|...|.+++|+| +|++|+|| +.|++|++||+ .++.+++++.+|...|.+++++++|++
T Consensus 180 ~~~-----~~~~~~~~h~~~V~~v~~~p-~~~~l~s~---s~D~~i~~wd~--~~~~~~~~~~~h~~~v~~~~~~~~g~~ 248 (410)
T 1vyh_C 180 QGF-----ECIRTMHGHDHNVSSVSIMP-NGDHIVSA---SRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTL 248 (410)
T ss_dssp TSS-----CEEECCCCCSSCEEEEEECS-SSSEEEEE---ETTSEEEEEET--TTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred CCC-----ceeEEEcCCCCCEEEEEEeC-CCCEEEEE---eCCCeEEEEEC--CCCcEEEEEeCCCccEEEEEECCCCCE
Confidence 875 46788899999999999999 99999997 48999999998 578889999999999999999999998
Q ss_pred hhccc
Q 000080 2381 ALSKC 2385 (2389)
Q Consensus 2381 ~~s~~ 2385 (2389)
+++-+
T Consensus 249 l~s~s 253 (410)
T 1vyh_C 249 IASCS 253 (410)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 87643
No 14
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.86 E-value=9.4e-21 Score=215.32 Aligned_cols=173 Identities=19% Similarity=0.249 Sum_probs=138.9
Q ss_pred ccceeeccccccccccccccCC--CCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCce-eeEecccCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPP--ATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKA-TATYGVLPAANVPP 2267 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~--atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~-l~Tl~vl~gh~~p~ 2267 (2389)
..+|+| +.|.+.++|+..... .++ +.-.|++|+|+|++++|+|||.|++|++||+.++.. ..++.
T Consensus 68 ~~l~s~-s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~--------- 137 (304)
T 2ynn_A 68 NWIIVG-SDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE--------- 137 (304)
T ss_dssp TEEEEE-ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC---------
T ss_pred CEEEEE-CCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc---------
Confidence 346667 777777888764221 111 123579999999999999999999999999988854 45552
Q ss_pred CCCCCCEEEEEECC-CCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecC-CCCEEEEeecCCCCCe
Q 000080 2268 PYALASISALQFDH-YGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITS-SGSVIAAAGHSSNGIN 2345 (2389)
Q Consensus 2268 ~GH~~~V~sVaFSP-DG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~-DGslLASAG~sS~D~T 2345 (2389)
||...|++|+|+| +++.||+|+.|++|++||++++. .......+|...+..++|+|. ++++|||+ +.|++
T Consensus 138 -~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~---s~D~~ 209 (304)
T 2ynn_A 138 -GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST----PNFTLTTGQERGVNYVDYYPLPDKPYMITA---SDDLT 209 (304)
T ss_dssp -CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS----CSEEEECCCTTCEEEEEECCSTTCCEEEEE---ETTSE
T ss_pred -ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC----ccceeccCCcCcEEEEEEEEcCCCCEEEEE---cCCCe
Confidence 5678999999999 68999999999999999998752 223333567788999999873 77899997 48999
Q ss_pred EEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2346 VVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2346 VrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
|+|||+ .++++++++.+|.+.|.+++++|++++++|-+
T Consensus 210 i~iWd~--~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s 247 (304)
T 2ynn_A 210 IKIWDY--QTKSCVATLEGHMSNVSFAVFHPTLPIIISGS 247 (304)
T ss_dssp EEEEET--TTTEEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEeC--CCCccceeeCCCCCCEEEEEECCCCCEEEEEc
Confidence 999998 56788999999999999999999999887754
No 15
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.85 E-value=7.5e-21 Score=223.10 Aligned_cols=170 Identities=15% Similarity=0.124 Sum_probs=137.2
Q ss_pred ccceeeccccccccccccccC--CCCcC--ceeEEEEEEcCCCC-eEEEEeCCCcEEEeecCCCceeeEecccCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDP--PATVE--NISTRAFSSHPLRP-FFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPP 2267 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~--~atv~--ni~VrsVAFsPdG~-~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~ 2267 (2389)
..+|+| +.|.+.++|+.... ..++. .-.|++++|+|+++ +|+|||.|++|++||+++++++.++..
T Consensus 140 ~~l~sg-s~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-------- 210 (344)
T 4gqb_B 140 TQAVSG-SKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC-------- 210 (344)
T ss_dssp SEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC---------
T ss_pred CEEEEE-eCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeec--------
Confidence 457777 78888888876421 12221 24679999999986 789999999999999999998887641
Q ss_pred CCCCCCEEEEEECCC-CCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCC-CEEEEeecCCCCCe
Q 000080 2268 PYALASISALQFDHY-GHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSG-SVIAAAGHSSNGIN 2345 (2389)
Q Consensus 2268 ~GH~~~V~sVaFSPD-G~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DG-slLASAG~sS~D~T 2345 (2389)
.+|...|.+++|+|+ ++.||+|+.||+|+|||++++ +++.++.+|...|++++|+| +| ++|||+ |.|++
T Consensus 211 ~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~-----~~~~~~~~h~~~v~~v~fsp-~g~~~lasg---s~D~~ 281 (344)
T 4gqb_B 211 SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST-----SCVLSSAVHSQCVTGLVFSP-HSVPFLASL---SEDCS 281 (344)
T ss_dssp ---CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-------CCEEEECCSSCEEEEEECS-SSSCCEEEE---ETTSC
T ss_pred ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC-----cEEEEEcCCCCCEEEEEEcc-CCCeEEEEE---eCCCe
Confidence 234567999999996 578999999999999999986 57889999999999999999 66 689986 58999
Q ss_pred EEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhc
Q 000080 2346 VVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2346 VrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s 2383 (2389)
|+|||+ .+++ +..+.+|++.|++++++|+|++.|.
T Consensus 282 i~vwd~--~~~~-~~~~~~H~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 282 LAVLDS--SLSE-LFRSQAHRDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp EEEECT--TCCE-EEEECCCSSCEEEEEECSSSTTEEE
T ss_pred EEEEEC--CCCc-EEEEcCCCCCEEEEEEeCCCCeEEE
Confidence 999997 3443 5678999999999999999998764
No 16
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.85 E-value=7.8e-17 Score=195.18 Aligned_cols=212 Identities=16% Similarity=0.223 Sum_probs=148.2
Q ss_pred ccccccCCCC---CCCcceeecCCCCCCeEEEEecCCcEEEEeCCCCcccccccccccceeeeeccCCCCC-eeEEEEcC
Q 000080 29 RSEFIPTAPT---RSTSTIDWLPDFAGYSWVAYGASSLLVISHFPSPLSQEEALIGPIFRQVFALSDNSLP-VTSISWSP 104 (2389)
Q Consensus 29 ~~~~ip~ap~---~~~~ai~wlpD~~G~~~vAYasg~~vVI~~l~SP~~~~e~~~~p~~~Qviegh~d~~d-Vk~VaWSP 104 (2389)
+..++|+.|. ....+++|+|| | .++|++++..+.+..++++....+.. +.+++|.. . |.+++|+|
T Consensus 6 ~~~~~~~~~~~~~~~v~~~~~spd--g-~~l~~~~~~~v~v~~~~~~~~~~~~~------~~~~~h~~--~~v~~~~~sp 74 (615)
T 1pgu_A 6 LKEIIPPQPSTQRNFTTHLSYDPT--T-NAIAYPCGKSAFVRCLDDGDSKVPPV------VQFTGHGS--SVVTTVKFSP 74 (615)
T ss_dssp EEEEECCCCCCCTTCCCCCEEETT--T-TEEEEEETTEEEEEECCSSCCSSCSE------EEECTTTT--SCEEEEEECS
T ss_pred hhhccCCCCCCccCceeEEEECCC--C-CEEEEecCCeEEEEECCCCCCccccc------eEEecCCC--ceEEEEEECc
Confidence 3455565555 44567889998 7 59999998877777655432222333 67788866 8 99999999
Q ss_pred --CCCCCCcEEE-ecCCeEEEEeeCCCCCCCCccceeeEEec-ccceEEEEeecCCCCeEEEEecc------eEEeeccC
Q 000080 105 --ETPSIGQLAA-ASENCIFVFAHDSASSKGSFCWSQNAILV-QGTKVEAIEWTGSGDGIVAGGME------TVLWKKKN 174 (2389)
Q Consensus 105 --d~~~~GeIaA-SyDntIRVw~~d~~~~kgd~~W~~~~tL~-hssTV~sIAWSpdG~rLaSggdD------V~IW~~~~ 174 (2389)
+ +..||+ +.|++|+||..+...........+...+. |...|.+++|+|+|++|++++.+ +.+|+..
T Consensus 75 ~~~---~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~- 150 (615)
T 1pgu_A 75 IKG---SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG- 150 (615)
T ss_dssp STT---CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC-
T ss_pred CCC---CCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC-
Confidence 8 555554 46899999987511001111234444554 78899999999999999999874 6778732
Q ss_pred CcEEEEEEeeccccceEEEEeecCCCc--eEeeecccccccCCCCCCCceeEEEeeCCCccceeecccCCC---CeeEEE
Q 000080 175 TLWEIAWKFKENYPQNLVSATWSIEGP--SATAASMSQLDLLGPKEAGKCVFICCSDGKSEYIKLELCHPQ---PVSMVQ 249 (2389)
Q Consensus 175 s~Wecvwt~~~~~~~~ivsvaWSpdG~--fATag~dikf~~~~~~~~~kpV~V~~~dg~~~~~~ve~aH~q---dVn~V~ 249 (2389)
+.+.++. .|...+.+++|+|+|. +||++.+.. +.+|... ..........|.. .|.+++
T Consensus 151 ---~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~------------v~vwd~~-~~~~~~~~~~~~~~~~~v~~~~ 213 (615)
T 1pgu_A 151 ---NSLGEVS-GHSQRINACHLKQSRPMRSMTVGDDGS------------VVFYQGP-PFKFSASDRTHHKQGSFVRDVE 213 (615)
T ss_dssp ---CEEEECC-SCSSCEEEEEECSSSSCEEEEEETTTE------------EEEEETT-TBEEEEEECSSSCTTCCEEEEE
T ss_pred ---Ccceeee-cCCccEEEEEECCCCCcEEEEEeCCCc------------EEEEeCC-CcceeeeecccCCCCceEEEEE
Confidence 2444444 4667788999999996 899888744 4455322 2223345567998 999999
Q ss_pred eccCCCCCCCCC-CccccCceEEeeecCCeEEEEEee
Q 000080 250 WRPSTRRHSPGD-TKRSQRHVLLTCCLDGTVRLWCEM 285 (2389)
Q Consensus 250 W~Ps~~~~~~~D-gk~~~~nILAScSdDgTVRLW~e~ 285 (2389)
|+| | ++ .|++++.||+|+||+..
T Consensus 214 ~~~--------~~~~-----~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 214 FSP--------DSGE-----FVITVGSDRKISCFDGK 237 (615)
T ss_dssp ECS--------TTCC-----EEEEEETTCCEEEEETT
T ss_pred ECC--------CCCC-----EEEEEeCCCeEEEEECC
Confidence 999 4 44 49999999999999954
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.84 E-value=2.7e-20 Score=214.59 Aligned_cols=174 Identities=11% Similarity=0.078 Sum_probs=143.1
Q ss_pred ccccceeeccccccccccccccCC---------CCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecc
Q 000080 2191 YAGIGASALGWETQDDFEDYVDPP---------ATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGV 2259 (2389)
Q Consensus 2191 ~~~~~Asg~~~d~~~~~~~~~d~~---------atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~v 2259 (2389)
...++|+| +.|.+.++|+..... .++ +.-.|.+++|+|++.+|+|||.|++|||||+.+++++.++.
T Consensus 38 d~~~l~sg-s~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~- 115 (343)
T 2xzm_R 38 DSPVLISG-SRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV- 115 (343)
T ss_dssp CCCEEEEE-ETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE-
T ss_pred CCCEEEEE-cCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-
Confidence 34578888 899999999875321 111 12357999999999999999999999999999999988884
Q ss_pred cCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCC--------
Q 000080 2260 LPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSG-------- 2331 (2389)
Q Consensus 2260 l~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DG-------- 2331 (2389)
||...|++|+|+|||+.||+|+.|++|++||+... .........+|...|.+++|+| ++
T Consensus 116 ---------~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~ 182 (343)
T 2xzm_R 116 ---------GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE---CKFSSAEKENHSDWVSCVRYSP-IMKSANKVQP 182 (343)
T ss_dssp ---------CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC---EEEECCTTTSCSSCEEEEEECC-CCCSCSCCCS
T ss_pred ---------CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC---ceeeeecccCCCceeeeeeecc-ccccccccCC
Confidence 46789999999999999999999999999999842 1112222347999999999999 65
Q ss_pred --CEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2332 --SVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2332 --slLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
.+||++ +.|++|+|||. ..+.+..+.+|.+.|.+++++|+|+++++-+
T Consensus 183 ~~~~l~s~---~~d~~i~iwd~---~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 183 FAPYFASV---GWDGRLKVWNT---NFQIRYTFKAHESNVNHLSISPNGKYIATGG 232 (343)
T ss_dssp SCCEEEEE---ETTSEEEEEET---TTEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCEEEEE---cCCCEEEEEcC---CCceeEEEcCccccceEEEECCCCCEEEEEc
Confidence 789987 48999999995 4566789999999999999999999987754
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.84 E-value=4.2e-20 Score=230.74 Aligned_cols=144 Identities=18% Similarity=0.227 Sum_probs=124.7
Q ss_pred eEEEEEEcCCCC-eEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2221 STRAFSSHPLRP-FFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2221 ~VrsVAFsPdG~-~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
.|++++|+|+++ .|||||.|++|++||..+++++.++. ||.+.|++|+|+|||++||||+.|++|+|||
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~----------~H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG----------EHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC----------CCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec----------cccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 569999999998 59999999999999999998888874 5779999999999999999999999999999
Q ss_pred CCCCCccCcccceeee-------ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc--------------
Q 000080 2300 LEVGGRSNVRPMESCL-------CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS-------------- 2358 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~-------gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~-------------- 2358 (2389)
+.++. +..++. +|.+.|.+++|+| ||++|||+ +.|++|||||+. ++++
T Consensus 219 ~~~g~-----~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~---s~D~~v~lWd~~--~~~~~~~~~~~~~~~~~~ 287 (611)
T 1nr0_A 219 GVDGT-----KTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASA---SADKTIKIWNVA--TLKVEKTIPVGTRIEDQQ 287 (611)
T ss_dssp TTTCC-----EEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEE---ETTSEEEEEETT--TTEEEEEEECCSSGGGCE
T ss_pred CCCCc-----EeeeeccccccccccCCCEEEEEECC-CCCEEEEE---eCCCeEEEEeCC--CCceeeeecCCCCcccee
Confidence 99863 344442 8999999999999 99999997 489999999973 3333
Q ss_pred -----------------------------eEEEEeecCcEEEEeecccchhhhccc
Q 000080 2359 -----------------------------RASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2359 -----------------------------v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
++.+.+|.+.|++++++|+|++++|-.
T Consensus 288 ~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s 343 (611)
T 1nr0_A 288 LGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSAD 343 (611)
T ss_dssp EEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 345678999999999999999988743
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.83 E-value=3.6e-20 Score=217.30 Aligned_cols=175 Identities=18% Similarity=0.223 Sum_probs=140.1
Q ss_pred ccccccceeeccccccccccccccCCC---------CcCceeEEEEEEcC-CCCeEEEEeCCCcEEEeecC-CCceeeEe
Q 000080 2189 PGYAGIGASALGWETQDDFEDYVDPPA---------TVENISTRAFSSHP-LRPFFLVGSSNTHIYLWEFG-KDKATATY 2257 (2389)
Q Consensus 2189 ~g~~~~~Asg~~~d~~~~~~~~~d~~a---------tv~ni~VrsVAFsP-dG~~LASGS~DgTIRLWDl~-tGk~l~Tl 2257 (2389)
|.....+++| ++|.+.++|+...... .-+...|.+++|+| ++.+|+|||.|++|++||++ +++++.++
T Consensus 167 ~~~~~~l~s~-s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~ 245 (380)
T 3iz6_a 167 PDQETRLITG-SGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTY 245 (380)
T ss_dssp SSSSSCEEEE-CTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEE
T ss_pred cCCCCEEEEE-CCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEE
Confidence 3334567888 8888888887642211 11224579999987 89999999999999999997 45677777
Q ss_pred cccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeec-------CCCeeEEEEecCC
Q 000080 2258 GVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCF-------SSHAMDVSYITSS 2330 (2389)
Q Consensus 2258 ~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gH-------s~~V~sVAFSP~D 2330 (2389)
. ||.+.|++|+|+|||++||||+.||+|++||++++ +++..+..| ...|.+++|+| +
T Consensus 246 ~----------~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~s~-~ 309 (380)
T 3iz6_a 246 H----------GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG-----HQLQVYNREPDRNDNELPIVTSVAFSI-S 309 (380)
T ss_dssp C----------CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT-----EEEEEECCCCSSSCCSSCSCSEEEECS-S
T ss_pred C----------CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC-----cEEEEecccccccccccCceEEEEECC-C
Confidence 3 57789999999999999999999999999999986 234444333 23589999999 9
Q ss_pred CCEEEEeecCCCCCeEEEeeCCCCCCCceEEE----EeecCcEEEEeecccchhhhccc
Q 000080 2331 GSVIAAAGHSSNGINVVVWDTLAPPTSSRASI----TCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2331 GslLASAG~sS~D~TVrLWD~l~~tg~~v~sL----~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
|++||+| +.|++|+|||+ ..++.+..+ .+|.+.|++++++|+|++.+|-.
T Consensus 310 g~~l~~g---~~dg~i~vwd~--~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 310 GRLLFAG---YSNGDCYVWDT--LLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp SSEEEEE---CTTSCEEEEET--TTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEEC
T ss_pred CCEEEEE---ECCCCEEEEEC--CCCceEEEEecccCCCCCceEEEEECCCCCEEEEee
Confidence 9999986 58999999998 456777777 78999999999999999887753
No 20
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.83 E-value=3.5e-20 Score=224.54 Aligned_cols=167 Identities=20% Similarity=0.167 Sum_probs=139.8
Q ss_pred ccceeeccccccccccccccC-CCCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDP-PATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPY 2269 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~-~atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~G 2269 (2389)
..+|++ +.|...++|+.... ..++ +.-.|.+++|+||+++|++|+.|++|++||. +++++.++. +
T Consensus 398 ~~l~~~-~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~----------~ 465 (577)
T 2ymu_A 398 QTIASA-SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLT----------G 465 (577)
T ss_dssp SCEEEE-ETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEE----------C
T ss_pred CEEEEE-eCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEc----------C
Confidence 346666 66667777754211 1111 1235699999999999999999999999996 678877774 4
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEe
Q 000080 2270 ALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVW 2349 (2389)
Q Consensus 2270 H~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLW 2349 (2389)
|...|++++|+|||++||+|+.|++|++||.. + +.+.++.+|...|++++|+| ||++|||+| .|++|+||
T Consensus 466 ~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~-----~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~---~dg~v~lw 535 (577)
T 2ymu_A 466 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G-----QLLQTLTGHSSSVRGVAFSP-DGQTIASAS---DDKTVKLW 535 (577)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETT-S-----CEEEEEECCSSCEEEEEECT-TSSCEEEEE---TTSEEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-C-----CEEEEEeCCCCCEEEEEEcC-CCCEEEEEE---CcCEEEEE
Confidence 67889999999999999999999999999964 3 46788999999999999999 999999974 89999999
Q ss_pred eCCCCCCCceEEEEeecCcEEEEeecccchhhhcc
Q 000080 2350 DTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2350 D~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
|. ++++++.+.+|.+.|++++++|+|++.+|-
T Consensus 536 d~---~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~ 567 (577)
T 2ymu_A 536 NR---NGQLLQTLTGHSSSVWGVAFSPDGQTIASA 567 (577)
T ss_dssp CT---TSCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred eC---CCCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 95 678899999999999999999999998874
No 21
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.83 E-value=5.3e-20 Score=208.55 Aligned_cols=173 Identities=11% Similarity=0.076 Sum_probs=138.5
Q ss_pred cccceeecccccccccccccc----CCCCcC--ceeEEEEEEcCC--CCeEEEEeCCCcEEEeecCCCc--eeeEecccC
Q 000080 2192 AGIGASALGWETQDDFEDYVD----PPATVE--NISTRAFSSHPL--RPFFLVGSSNTHIYLWEFGKDK--ATATYGVLP 2261 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d----~~atv~--ni~VrsVAFsPd--G~~LASGS~DgTIRLWDl~tGk--~l~Tl~vl~ 2261 (2389)
...+|+| ++|.+.++|+... ...++. .-.|++|+|+|+ |++|||||.|++|||||+.+++ ++.++.
T Consensus 21 g~~las~-s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~--- 96 (297)
T 2pm7_B 21 GKRMATC-SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHA--- 96 (297)
T ss_dssp SSEEEEE-ETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEEC---
T ss_pred CCEEEEE-eCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEee---
Confidence 4578888 8999999998742 222222 246799999864 8999999999999999998875 444442
Q ss_pred CCCCCCCCCCCCEEEEEECCC--CCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecC----------
Q 000080 2262 AANVPPPYALASISALQFDHY--GHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITS---------- 2329 (2389)
Q Consensus 2262 gh~~p~~GH~~~V~sVaFSPD--G~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~---------- 2329 (2389)
+|...|++|+|+|+ |+.||+|+.|++|++||+++++. .....+.+|...|.+++|+|.
T Consensus 97 -------~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~---~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 166 (297)
T 2pm7_B 97 -------VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT---TSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (297)
T ss_dssp -------CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC---BCCEEEECCSSCEEEEEECCCC---------
T ss_pred -------cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc---eeeeeeecccCccceEeecCCcccccccCCC
Confidence 46788999999998 89999999999999999987521 224667899999999999993
Q ss_pred --CCCEEEEeecCCCCCeEEEeeCCCCCCC----ceEEEEeecCcEEEEeecccc---hhhhc
Q 000080 2330 --SGSVIAAAGHSSNGINVVVWDTLAPPTS----SRASITCHEGLYDLFLPLKLL---NFALS 2383 (2389)
Q Consensus 2330 --DGslLASAG~sS~D~TVrLWD~l~~tg~----~v~sL~GH~~~V~svA~~~~~---~~~~s 2383 (2389)
++++|||| +.|++|||||+. +++ .++.|.+|++.|++++++|++ ++.+|
T Consensus 167 ~~~~~~l~sg---s~D~~v~lwd~~--~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las 224 (297)
T 2pm7_B 167 TKESRKFVTG---GADNLVKIWKYN--SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS 224 (297)
T ss_dssp ---CCEEEEE---ETTSCEEEEEEE--TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred CCCcceEEEE---cCCCcEEEEEEc--CCCceEEEEEEecCCCCceEEEEECCCCCCceEEEE
Confidence 25799997 489999999984 333 467899999999999999985 56555
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.83 E-value=9e-20 Score=212.75 Aligned_cols=171 Identities=16% Similarity=0.168 Sum_probs=140.4
Q ss_pred cccceeeccccccccccccccCC--CCc--CceeEEEEEEcC--CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDPP--ATV--ENISTRAFSSHP--LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANV 2265 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~--atv--~ni~VrsVAFsP--dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~ 2265 (2389)
+...+++ +.|.+.++|+..... .++ +...|.+++|+| +|++|+||+.|++|++||+++++++.++.
T Consensus 166 ~~~l~t~-s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~------- 237 (354)
T 2pbi_B 166 DMQILTA-SGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE------- 237 (354)
T ss_dssp SSEEEEE-ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC-------
T ss_pred CCEEEEE-eCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec-------
Confidence 3456777 788888888874221 111 123568889988 57899999999999999999999998874
Q ss_pred CCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeee--cCCCeeEEEEecCCCCEEEEeecCCCC
Q 000080 2266 PPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLC--FSSHAMDVSYITSSGSVIAAAGHSSNG 2343 (2389)
Q Consensus 2266 p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~g--Hs~~V~sVAFSP~DGslLASAG~sS~D 2343 (2389)
+|...|++|+|+|+|+.||+|+.|++|++||++++ +.+..+.. +...+.+++|+| +|++||++ +.|
T Consensus 238 ---~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~-----~~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g---~~d 305 (354)
T 2pbi_B 238 ---THESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD-----REVAIYSKESIIFGASSVDFSL-SGRLLFAG---YND 305 (354)
T ss_dssp ---CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-----EEEEEECCTTCCSCEEEEEECT-TSSEEEEE---ETT
T ss_pred ---CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-----cEEEEEcCCCcccceeEEEEeC-CCCEEEEE---ECC
Confidence 46789999999999999999999999999999875 23333332 345788999999 99999997 489
Q ss_pred CeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhcc
Q 000080 2344 INVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2344 ~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
++|+|||+ .+++.+..+.+|++.|++++++|+|++.+|-
T Consensus 306 ~~i~vwd~--~~~~~~~~l~~h~~~v~~l~~spdg~~l~sg 344 (354)
T 2pbi_B 306 YTINVWDV--LKGSRVSILFGHENRVSTLRVSPDGTAFCSG 344 (354)
T ss_dssp SCEEEEET--TTCSEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred CcEEEEEC--CCCceEEEEECCCCcEEEEEECCCCCEEEEE
Confidence 99999998 4678899999999999999999999988764
No 23
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.83 E-value=8e-20 Score=205.82 Aligned_cols=144 Identities=15% Similarity=0.194 Sum_probs=131.1
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.|++++|+|+|++||+|+.|++|++||+.+++...++. +|...|.+++|+|||++||+|+.||+|++||+
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----------GHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC----------CCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc----------cCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 46999999999999999999999999999999888773 46788999999999999999999999999999
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchh
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~ 2380 (2389)
+++ +.+..+.+|...|.+++|+| +|++||++ +.|++|++||+ .++++++.+.+|...|.+++++++|++
T Consensus 95 ~~~-----~~~~~~~~~~~~v~~~~~~~-~~~~l~s~---~~d~~i~iwd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~ 163 (312)
T 4ery_A 95 SSG-----KCLKTLKGHSNYVFCCNFNP-QSNLIVSG---SFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNRDGSL 163 (312)
T ss_dssp TTC-----CEEEEEECCSSCEEEEEECS-SSSEEEEE---ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred CCC-----cEEEEEcCCCCCEEEEEEcC-CCCEEEEE---eCCCcEEEEEC--CCCEEEEEecCCCCcEEEEEEcCCCCE
Confidence 986 46788899999999999999 99999997 48999999998 567889999999999999999999998
Q ss_pred hhccc
Q 000080 2381 ALSKC 2385 (2389)
Q Consensus 2381 ~~s~~ 2385 (2389)
.++-+
T Consensus 164 l~~~~ 168 (312)
T 4ery_A 164 IVSSS 168 (312)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77643
No 24
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.83 E-value=3.7e-20 Score=230.90 Aligned_cols=171 Identities=10% Similarity=0.071 Sum_probs=141.6
Q ss_pred ccccceeeccccccccccccccCCC-------------Cc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCce-e
Q 000080 2191 YAGIGASALGWETQDDFEDYVDPPA-------------TV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKA-T 2254 (2389)
Q Consensus 2191 ~~~~~Asg~~~d~~~~~~~~~d~~a-------------tv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~-l 2254 (2389)
..+++|++ +.|.+.++|+...... ++ +...|.+++|+|++ .||+||.||+|+|||+.+++. .
T Consensus 224 ~~~~LAs~-s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~ 301 (524)
T 2j04_B 224 LVGCLSFV-SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPS 301 (524)
T ss_dssp SSCEEEEE-ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCS
T ss_pred CCceEEEE-ecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCce
Confidence 45689999 8999999998753311 11 12467999999965 899999999999999987753 3
Q ss_pred eEecccCCCCCCCCCCCCCEEEE--EECCCC-CEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCC--CeeEEEEecC
Q 000080 2255 ATYGVLPAANVPPPYALASISAL--QFDHYG-HRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSS--HAMDVSYITS 2329 (2389)
Q Consensus 2255 ~Tl~vl~gh~~p~~GH~~~V~sV--aFSPDG-~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~--~V~sVAFSP~ 2329 (2389)
.++. +|...|++| +|+|+| ++|||||.|++|||||++++ ++..++.+|.. .|.+|+|+|
T Consensus 302 ~~~~----------~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~-----~~~~~~~~~~~~~~v~~v~fsp- 365 (524)
T 2j04_B 302 FYDQ----------VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI-----ATTKTTVSRFRGSNLVPVVYCP- 365 (524)
T ss_dssp EEEE----------CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH-----HHHCEEEEECSCCSCCCEEEET-
T ss_pred EEee----------cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC-----CcccccccccccCcccceEeCC-
Confidence 4453 467899999 689999 99999999999999999875 45567778864 588999999
Q ss_pred CCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhcc
Q 000080 2330 SGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2330 DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
+|+.+|++ +.|++|||||+ .++.+++++.+|.+.|++|+++|+|++++|-
T Consensus 366 ~~~~l~s~---~~d~tv~lwd~--~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sg 415 (524)
T 2j04_B 366 QIYSYIYS---DGASSLRAVPS--RAAFAVHPLVSRETTITAIGVSRLHPMVLAG 415 (524)
T ss_dssp TTTEEEEE---CSSSEEEEEET--TCTTCCEEEEECSSCEEEEECCSSCCBCEEE
T ss_pred CcCeEEEe---CCCCcEEEEEC--cccccceeeecCCCceEEEEeCCCCCeEEEE
Confidence 89999986 48999999998 4677889999999999999999999998874
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.82 E-value=1.4e-19 Score=208.87 Aligned_cols=171 Identities=12% Similarity=0.140 Sum_probs=143.0
Q ss_pred cccceeeccccccccccccccCCC--C--cCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCc----eeeEecccCCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDPPA--T--VENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDK----ATATYGVLPAA 2263 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~a--t--v~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk----~l~Tl~vl~gh 2263 (2389)
...+|++ +.|.+.++|+...... + .+.-.|.+++|+|+|++||+|+.|++|++||+.+++ ....+
T Consensus 67 ~~~l~s~-s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~------ 139 (340)
T 1got_B 67 SRLLLSA-SQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL------ 139 (340)
T ss_dssp SSEEEEE-ETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEE------
T ss_pred CCEEEEE-eCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEe------
Confidence 4567888 8889999997642211 1 122357999999999999999999999999998764 23333
Q ss_pred CCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCC
Q 000080 2264 NVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNG 2343 (2389)
Q Consensus 2264 ~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D 2343 (2389)
.||.+.|.+++|+|+++ +++++.|++|++||++++ +++.++.+|.+.|.+++|+| +|++|||+ +.|
T Consensus 140 ----~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~-----~~~~~~~~h~~~v~~~~~~~-~~~~l~sg---~~d 205 (340)
T 1got_B 140 ----AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG-----QQTTTFTGHTGDVMSLSLAP-DTRLFVSG---ACD 205 (340)
T ss_dssp ----ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT-----EEEEEECCCSSCEEEEEECT-TSSEEEEE---ETT
T ss_pred ----cCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC-----cEEEEEcCCCCceEEEEECC-CCCEEEEE---eCC
Confidence 25678999999999885 999999999999999986 46788899999999999999 99999997 489
Q ss_pred CeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2344 INVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2344 ~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
++|+|||+ .++++++.+.+|...|++++++|+|+..++-.
T Consensus 206 ~~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 245 (340)
T 1got_B 206 ASAKLWDV--REGMCRQTFTGHESDINAICFFPNGNAFATGS 245 (340)
T ss_dssp SCEEEEET--TTCSEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEEC--CCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc
Confidence 99999998 56788999999999999999999999877643
No 26
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.82 E-value=1.7e-19 Score=206.89 Aligned_cols=169 Identities=14% Similarity=0.152 Sum_probs=140.4
Q ss_pred ccccceeeccccccccccccccCC--CCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCC
Q 000080 2191 YAGIGASALGWETQDDFEDYVDPP--ATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVP 2266 (2389)
Q Consensus 2191 ~~~~~Asg~~~d~~~~~~~~~d~~--atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p 2266 (2389)
....+|+| ++|.+.++|+..... .++ +.-.|.+++|+|++++|+|||.|++|++||+. ++++.++.
T Consensus 76 dg~~l~s~-s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~-------- 145 (319)
T 3frx_A 76 DGAYALSA-SWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLL-------- 145 (319)
T ss_dssp TSSEEEEE-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEEC--------
T ss_pred CCCEEEEE-eCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEe--------
Confidence 34567888 899999999874221 111 12357999999999999999999999999994 67777763
Q ss_pred CCCCCCCEEEEEECCC------CCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecC
Q 000080 2267 PPYALASISALQFDHY------GHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHS 2340 (2389)
Q Consensus 2267 ~~GH~~~V~sVaFSPD------G~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~s 2340 (2389)
||...|.+++|+|+ +..|++|+.|++|++||++++ +....+.+|...|++++|+| +|++|||+
T Consensus 146 --~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~-----~~~~~~~~h~~~v~~~~~sp-~g~~l~s~--- 214 (319)
T 3frx_A 146 --GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF-----QIEADFIGHNSNINTLTASP-DGTLIASA--- 214 (319)
T ss_dssp --CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT-----EEEEEECCCCSCEEEEEECT-TSSEEEEE---
T ss_pred --ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc-----hhheeecCCCCcEEEEEEcC-CCCEEEEE---
Confidence 56789999999995 559999999999999999975 45677889999999999999 99999997
Q ss_pred CCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhc
Q 000080 2341 SNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2341 S~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s 2383 (2389)
+.|++|+|||+ .+++++..+.. .+.|.+++++|+|.++.+
T Consensus 215 ~~dg~i~iwd~--~~~~~~~~~~~-~~~v~~~~~sp~~~~la~ 254 (319)
T 3frx_A 215 GKDGEIMLWNL--AAKKAMYTLSA-QDEVFSLAFSPNRYWLAA 254 (319)
T ss_dssp ETTCEEEEEET--TTTEEEEEEEC-CSCEEEEEECSSSSEEEE
T ss_pred eCCCeEEEEEC--CCCcEEEEecC-CCcEEEEEEcCCCCEEEE
Confidence 48999999998 46677888875 468999999999988654
No 27
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.82 E-value=3.2e-19 Score=200.91 Aligned_cols=172 Identities=14% Similarity=0.178 Sum_probs=143.2
Q ss_pred cccceeeccccccccccccccCC--CCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDPP--ATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPP 2267 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~--atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~ 2267 (2389)
....|++ +.|...++|+..+.. ..+ +...|.+++|+|+|++|++|+.|++|++||+.+++++.++.
T Consensus 35 ~~~l~s~-~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~--------- 104 (312)
T 4ery_A 35 GEWLASS-SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK--------- 104 (312)
T ss_dssp SSEEEEE-ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---------
T ss_pred CCEEEEe-eCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEc---------
Confidence 3456777 777778887764221 111 22467999999999999999999999999999999988874
Q ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEE
Q 000080 2268 PYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVV 2347 (2389)
Q Consensus 2268 ~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVr 2347 (2389)
+|...|.+++|+|+|+.|++|+.||+|++||++++ +.+..+.+|...|.+++|+| +|++||++ +.|++|+
T Consensus 105 -~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~---~~d~~i~ 174 (312)
T 4ery_A 105 -GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-----KCLKTLPAHSDPVSAVHFNR-DGSLIVSS---SYDGLCR 174 (312)
T ss_dssp -CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-----CEEEEECCCSSCEEEEEECT-TSSEEEEE---ETTSCEE
T ss_pred -CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-----EEEEEecCCCCcEEEEEEcC-CCCEEEEE---eCCCcEE
Confidence 46788999999999999999999999999999986 46778889999999999999 99999997 4899999
Q ss_pred EeeCCCCCCCceEEE-EeecCcEEEEeecccchhhhccc
Q 000080 2348 VWDTLAPPTSSRASI-TCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2348 LWD~l~~tg~~v~sL-~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+||+ .+++++..+ ..|...+.+++++|+|++.++-+
T Consensus 175 ~wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 175 IWDT--ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp EEET--TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred EEEC--CCCceeeEEeccCCCceEEEEECCCCCEEEEEc
Confidence 9998 466777766 45677899999999999877643
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.82 E-value=7.6e-20 Score=210.62 Aligned_cols=168 Identities=10% Similarity=0.082 Sum_probs=130.7
Q ss_pred ccceeeccccccccccccccCC---------CCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCC----ceeeEe
Q 000080 2193 GIGASALGWETQDDFEDYVDPP---------ATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKD----KATATY 2257 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~---------atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tG----k~l~Tl 2257 (2389)
.++|+| ++|.+.++|+..... .++ +.-.|++|+|+|+|++|||||.|++|++||+.++ +++.++
T Consensus 71 ~~las~-s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~ 149 (330)
T 2hes_X 71 SLLAAG-SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL 149 (330)
T ss_dssp SEEEEE-ETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE
T ss_pred CEEEEE-eCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe
Confidence 467788 888888888763211 111 1236799999999999999999999999999432 345555
Q ss_pred cccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCC--CCEEE
Q 000080 2258 GVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSS--GSVIA 2335 (2389)
Q Consensus 2258 ~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~D--GslLA 2335 (2389)
. +|...|++|+|+|+|+.||||+.|++|++||+.++. .+++..+.+|...|++++|+| + +.+||
T Consensus 150 ~----------~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~---~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~ 215 (330)
T 2hes_X 150 Q----------EHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD---WECVAVLNGHEGTVWSSDFDK-TEGVFRLC 215 (330)
T ss_dssp C----------CCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE---EEEEEEECCCSSCEEEEEECC-SSSSCEEE
T ss_pred c----------cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC---eeEEEEccCCCCcEEEEEecC-CCCeeEEE
Confidence 3 467899999999999999999999999999997642 246788899999999999999 6 67899
Q ss_pred EeecCCCCCeEEEeeCCCCCC------CceEEEEe-ecCcEEEEeecccc
Q 000080 2336 AAGHSSNGINVVVWDTLAPPT------SSRASITC-HEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2336 SAG~sS~D~TVrLWD~l~~tg------~~v~sL~G-H~~~V~svA~~~~~ 2378 (2389)
|+ +.|++|+|||+..... .++..+.+ |...|+++++++.+
T Consensus 216 s~---s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~ 262 (330)
T 2hes_X 216 SG---SDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG 262 (330)
T ss_dssp EE---ETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS
T ss_pred EE---eCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC
Confidence 87 4899999999731111 23455655 99999999999766
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.82 E-value=2.5e-19 Score=203.05 Aligned_cols=141 Identities=19% Similarity=0.139 Sum_probs=118.8
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCC--ceeeEecccCCCCCCCCCCCCCEEEEEECCC--CCEEEEEeCCCcEE
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKD--KATATYGVLPAANVPPPYALASISALQFDHY--GHRFASAALDGTVC 2296 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tG--k~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD--G~~LASgS~DgTVk 2296 (2389)
.|++++|+|+|++|||||.|++|||||+.++ +++.++. ||.+.|++|+|+|+ |++|||||.||+|+
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~----------gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT----------GHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC----------CCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc----------cccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 4699999999999999999999999999743 5667763 57799999999874 99999999999999
Q ss_pred EeeCCCCCccCcccceeeeecCCCeeEEEEecCC--CCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEee
Q 000080 2297 TWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSS--GSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLP 2374 (2389)
Q Consensus 2297 LWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~D--GslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~ 2374 (2389)
|||++++. ...+..+.+|...|++++|+| + |.+||++ +.|++|+|||+..........+.+|...|.++++
T Consensus 81 iWd~~~~~---~~~~~~~~~h~~~v~~v~~~p-~~~g~~l~s~---s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~ 153 (297)
T 2pm7_B 81 IWKEENGR---WSQIAVHAVHSASVNSVQWAP-HEYGPMLLVA---SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 153 (297)
T ss_dssp EEEBSSSC---BCCCEEECCCSSCEEEEEECC-GGGCSEEEEE---ETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEE
T ss_pred EEEcCCCc---eEEEEEeecCCCceeEEEeCc-CCCCcEEEEE---ECCCcEEEEEecCCCceeeeeeecccCccceEee
Confidence 99999762 135667888999999999999 5 8999997 4899999999842111225788999999999999
Q ss_pred cccc
Q 000080 2375 LKLL 2378 (2389)
Q Consensus 2375 ~~~~ 2378 (2389)
+|++
T Consensus 154 ~p~~ 157 (297)
T 2pm7_B 154 APAT 157 (297)
T ss_dssp CCCC
T ss_pred cCCc
Confidence 9973
No 30
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.81 E-value=1e-19 Score=208.86 Aligned_cols=175 Identities=11% Similarity=0.025 Sum_probs=132.1
Q ss_pred ccceeeccccccccccccccCC-----CCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCce---eeEecccCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPP-----ATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKA---TATYGVLPA 2262 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~-----atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~---l~Tl~vl~g 2262 (2389)
..+|++ +.|...++|+..... ... +.-.|.+++|+|++++|++|+.|++|++||+.+++. ...+. +
T Consensus 68 ~~l~s~-s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~ 143 (377)
T 3dwl_C 68 NRIVTC-SQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLK---R 143 (377)
T ss_dssp CCEEEE-ETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEEC---S
T ss_pred CEEEEE-eCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEee---c
Confidence 356666 677777777765322 111 123679999999999999999999999999998873 55553 1
Q ss_pred CCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCc-------------cCcccceeeeecCCCeeEEEEecC
Q 000080 2263 ANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGR-------------SNVRPMESCLCFSSHAMDVSYITS 2329 (2389)
Q Consensus 2263 h~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggr-------------s~~k~l~tl~gHs~~V~sVAFSP~ 2329 (2389)
.|...|++++|+|||++||+|+.|++|++||+++++. ...+++.++ +|...|.+++|+|
T Consensus 144 ------~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp- 215 (377)
T 3dwl_C 144 ------PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP- 215 (377)
T ss_dssp ------SCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT-
T ss_pred ------ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC-
Confidence 2678999999999999999999999999999964310 001244555 8999999999999
Q ss_pred CCCEEEEeecCCCCCeEEEeeCCCCCCCc----eEEEEeecCcEEEEeecccchhhhcc
Q 000080 2330 SGSVIAAAGHSSNGINVVVWDTLAPPTSS----RASITCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2330 DGslLASAG~sS~D~TVrLWD~l~~tg~~----v~sL~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
+|++||++ +.|++|+|||+ .++++ ++.+.+|...|.+++++|+|+++++-
T Consensus 216 ~~~~l~~~---~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 216 SGNALAYA---GHDSSVTIAYP--SAPEQPPRALITVKLSQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp TSSCEEEE---ETTTEEC-CEE--CSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEE
T ss_pred CCCEEEEE---eCCCcEEEEEC--CCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEE
Confidence 99999997 48999999998 45666 88999999999999999999987764
No 31
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.81 E-value=6.2e-20 Score=215.68 Aligned_cols=184 Identities=11% Similarity=-0.024 Sum_probs=141.3
Q ss_pred cccccccccccceeeccccccccccccccCC--CCcC-ceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEeccc
Q 000080 2184 LAFGIPGYAGIGASALGWETQDDFEDYVDPP--ATVE-NISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVL 2260 (2389)
Q Consensus 2184 ~~~~~~g~~~~~Asg~~~d~~~~~~~~~d~~--atv~-ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl 2260 (2389)
.+|.--|.--..|++ ++|.+.++|+..... .+++ .-.|++|+|+|||++|++|++|+ +++|+..+++.+....
T Consensus 139 v~fSpDg~~la~as~-~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~-- 214 (365)
T 4h5i_A 139 VYISREGTVAAIASS-KVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKT-- 214 (365)
T ss_dssp EEECTTSSCEEEEES-CSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEEC--
T ss_pred EEEcCCCCEEEEEEC-CCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeee--
Confidence 345443443345667 788888998874221 1111 12568999999999999998665 6666666787665432
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCC----cEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEE
Q 000080 2261 PAANVPPPYALASISALQFDHYGHRFASAALDG----TVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAA 2336 (2389)
Q Consensus 2261 ~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~Dg----TVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLAS 2336 (2389)
..+|...|++|+|+|||+.+++++.|+ ++++||+..+. ........+.+|...|++++|+| ||++||+
T Consensus 215 ------~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~V~~~~~Sp-dg~~las 286 (365)
T 4h5i_A 215 ------DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGN-TSVLRSKQVTNRFKGITSMDVDM-KGELAVL 286 (365)
T ss_dssp ------CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTE-EEEEEEEEEESSCSCEEEEEECT-TSCEEEE
T ss_pred ------cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccce-ecceeeeeecCCCCCeEeEEECC-CCCceEE
Confidence 135678899999999999999999998 68999998652 11123456789999999999999 9999999
Q ss_pred eecCCCCCeEEEeeCCCCCCCceEEE-EeecCcEEEEeecccchhhhcc
Q 000080 2337 AGHSSNGINVVVWDTLAPPTSSRASI-TCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2337 AG~sS~D~TVrLWD~l~~tg~~v~sL-~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
| +.|++|+|||+ .++++++.+ .+|.+.|++|+++|+|++.+|-
T Consensus 287 g---s~D~~V~iwd~--~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 287 A---SNDNSIALVKL--KDLSMSKIFKQAHSFAITEVTISPDSTYVASV 330 (365)
T ss_dssp E---ETTSCEEEEET--TTTEEEEEETTSSSSCEEEEEECTTSCEEEEE
T ss_pred E---cCCCEEEEEEC--CCCcEEEEecCcccCCEEEEEECCCCCEEEEE
Confidence 7 48999999998 577888875 8999999999999999998874
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.81 E-value=2.8e-19 Score=210.67 Aligned_cols=173 Identities=14% Similarity=0.211 Sum_probs=140.2
Q ss_pred cccceeeccccccccccccccCC--CCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDPP--ATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPP 2267 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~--atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~ 2267 (2389)
+..+|+| +.|.+.++|+..... .++ +.-.|.+++|+|+|++|+|||.|++|++||+.++++..++.
T Consensus 135 g~~l~s~-~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--------- 204 (393)
T 1erj_A 135 GKFLATG-AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS--------- 204 (393)
T ss_dssp SSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---------
T ss_pred CCEEEEE-cCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE---------
Confidence 3467777 778888888764221 111 12357999999999999999999999999999999888774
Q ss_pred CCCCCCEEEEEECC-CCCEEEEEeCCCcEEEeeCCCCCccCcccceee-------eecCCCeeEEEEecCCCCEEEEeec
Q 000080 2268 PYALASISALQFDH-YGHRFASAALDGTVCTWQLEVGGRSNVRPMESC-------LCFSSHAMDVSYITSSGSVIAAAGH 2339 (2389)
Q Consensus 2268 ~GH~~~V~sVaFSP-DG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl-------~gHs~~V~sVAFSP~DGslLASAG~ 2339 (2389)
|...|.+++|+| ||++||+|+.||+|++||++++. .+..+ .+|...|.+++|+| +|++|||+
T Consensus 205 --~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~-----~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~-- 274 (393)
T 1erj_A 205 --IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF-----LVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSG-- 274 (393)
T ss_dssp --CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC-----EEEEEC------CCCSSCEEEEEECT-TSSEEEEE--
T ss_pred --cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc-----EEEeecccccCCCCCCCCEEEEEECC-CCCEEEEE--
Confidence 236799999999 89999999999999999999862 33333 68999999999999 99999997
Q ss_pred CCCCCeEEEeeCCCC----------CCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2340 SSNGINVVVWDTLAP----------PTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2340 sS~D~TVrLWD~l~~----------tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+.|++|+|||+... .+.+...+.+|.+.|.+++++++|++++|-+
T Consensus 275 -s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs 329 (393)
T 1erj_A 275 -SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS 329 (393)
T ss_dssp -ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE
T ss_pred -eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe
Confidence 48999999998321 2356778999999999999999999988754
No 33
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.81 E-value=3.2e-19 Score=208.70 Aligned_cols=166 Identities=10% Similarity=0.089 Sum_probs=132.6
Q ss_pred cccccccccccccCC--CCc------CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCC
Q 000080 2200 GWETQDDFEDYVDPP--ATV------ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYAL 2271 (2389)
Q Consensus 2200 ~~d~~~~~~~~~d~~--atv------~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~ 2271 (2389)
+.+.+.++|+..... ... +.-.|++|+|+|+|++||||+.|++|++||+.+++++.++. +|.
T Consensus 112 s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~----------~h~ 181 (357)
T 4g56_B 112 SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN----------AHS 181 (357)
T ss_dssp ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC----------CCS
T ss_pred ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc----------CCC
Confidence 456777888764221 111 12357999999999999999999999999999999998884 467
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEee
Q 000080 2272 ASISALQFDHYGH-RFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWD 2350 (2389)
Q Consensus 2272 ~~V~sVaFSPDG~-~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD 2350 (2389)
..|++|+|+|+|+ .|++++.||+|++||++++.. ........|...+.+++|+|+++.+||+| +.|++|+|||
T Consensus 182 ~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~---~~~~~~~~~~~~v~~v~~sp~~~~~la~g---~~d~~i~~wd 255 (357)
T 4g56_B 182 SEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP---ATRIDFCASDTIPTSVTWHPEKDDTFACG---DETGNVSLVN 255 (357)
T ss_dssp SCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC---BCBCCCTTCCSCEEEEEECTTSTTEEEEE---ESSSCEEEEE
T ss_pred CCEEEEEEccCCCceeeeeccCCceEEEECCCCce---eeeeeeccccccccchhhhhcccceEEEe---ecccceeEEE
Confidence 8999999999985 899999999999999998631 22233456778899999999667889986 4899999999
Q ss_pred CCCCCCCceEEEEeecCcEEEEeecccch-hhhc
Q 000080 2351 TLAPPTSSRASITCHEGLYDLFLPLKLLN-FALS 2383 (2389)
Q Consensus 2351 ~l~~tg~~v~sL~GH~~~V~svA~~~~~~-~~~s 2383 (2389)
+ .++++++.+.+|.+.|++++++|+|. +++|
T Consensus 256 ~--~~~~~~~~~~~~~~~v~~l~~sp~~~~~las 287 (357)
T 4g56_B 256 I--KNPDSAQTSAVHSQNITGLAYSYHSSPFLAS 287 (357)
T ss_dssp S--SCGGGCEEECCCSSCEEEEEECSSSSCCEEE
T ss_pred C--CCCcEeEEEeccceeEEEEEEcCCCCCEEEE
Confidence 8 46788999999999999999999985 4444
No 34
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.81 E-value=2.5e-19 Score=225.94 Aligned_cols=175 Identities=17% Similarity=0.137 Sum_probs=144.0
Q ss_pred cccceeeccccccccccccccCCCC-------c--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDPPAT-------V--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPA 2262 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~at-------v--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~g 2262 (2389)
.+++|+| +.|.+.++|+....... + +.-.|++++|+|+|++|+|||.|++|||||+.++++++++.
T Consensus 395 ~~~l~s~-s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~---- 469 (694)
T 3dm0_A 395 ADIIVSA-SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV---- 469 (694)
T ss_dssp CSEEEEE-ETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE----
T ss_pred CCEEEEE-eCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe----
Confidence 4578888 88999999987532111 1 12357999999999999999999999999999999988874
Q ss_pred CCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCC--CEEEEeecC
Q 000080 2263 ANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSG--SVIAAAGHS 2340 (2389)
Q Consensus 2263 h~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DG--slLASAG~s 2340 (2389)
||...|++|+|+|||++|+|||.|++|++||+.... .........+|...|.+++|+| ++ ..|+|+
T Consensus 470 ------~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~--~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~--- 537 (694)
T 3dm0_A 470 ------GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC--KYTISEGGEGHRDWVSCVRFSP-NTLQPTIVSA--- 537 (694)
T ss_dssp ------CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE--EEEECSSTTSCSSCEEEEEECS-CSSSCEEEEE---
T ss_pred ------CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc--ceeeccCCCCCCCcEEEEEEeC-CCCcceEEEE---
Confidence 477899999999999999999999999999987531 1111122357999999999999 65 578886
Q ss_pred CCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2341 SNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2341 S~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+.|++|+|||+ .+++++..+.+|.+.|++++++|+|++.+|-+
T Consensus 538 s~d~~v~vwd~--~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~ 580 (694)
T 3dm0_A 538 SWDKTVKVWNL--SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG 580 (694)
T ss_dssp ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred eCCCeEEEEEC--CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 48999999998 46677899999999999999999999988754
No 35
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.81 E-value=2.2e-19 Score=210.04 Aligned_cols=172 Identities=14% Similarity=0.111 Sum_probs=136.9
Q ss_pred ccceeeccccccccccccccC--CCCc--CceeEEEEEEcCCCC-eEEEEeCCCcEEEeecCCCceeeEecccCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDP--PATV--ENISTRAFSSHPLRP-FFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPP 2267 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~--~atv--~ni~VrsVAFsPdG~-~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~ 2267 (2389)
..+|+| +.|.+.++|+.... ...+ +.-.|++|+|+|+++ ++++|+.|++|++||+++++++..+. .
T Consensus 152 ~~l~sg-s~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~---~----- 222 (357)
T 4g56_B 152 TQAVSG-GKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRID---F----- 222 (357)
T ss_dssp SEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCC---C-----
T ss_pred CEEEEE-eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeee---e-----
Confidence 456777 77778888876421 1111 123579999999986 79999999999999999998776553 1
Q ss_pred CCCCCCEEEEEECCCC-CEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeE
Q 000080 2268 PYALASISALQFDHYG-HRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINV 2346 (2389)
Q Consensus 2268 ~GH~~~V~sVaFSPDG-~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TV 2346 (2389)
..|...|++|+|+|++ ++||+|+.|++|++||++++ +++.++.+|...|++++|+|+++++|||+ +.|++|
T Consensus 223 ~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~-----~~~~~~~~~~~~v~~l~~sp~~~~~lasg---s~D~~i 294 (357)
T 4g56_B 223 CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP-----DSAQTSAVHSQNITGLAYSYHSSPFLASI---SEDCTV 294 (357)
T ss_dssp TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG-----GGCEEECCCSSCEEEEEECSSSSCCEEEE---ETTSCE
T ss_pred ccccccccchhhhhcccceEEEeecccceeEEECCCC-----cEeEEEeccceeEEEEEEcCCCCCEEEEE---eCCCEE
Confidence 2356789999999985 78999999999999999976 46788999999999999999444689986 589999
Q ss_pred EEeeCCCCCCCceEEEEeecCcEEEEeecc-cchhhhcc
Q 000080 2347 VVWDTLAPPTSSRASITCHEGLYDLFLPLK-LLNFALSK 2384 (2389)
Q Consensus 2347 rLWD~l~~tg~~v~sL~GH~~~V~svA~~~-~~~~~~s~ 2384 (2389)
+|||+ .++++++. .+|.+.|++|+++| +++..+|-
T Consensus 295 ~iwd~--~~~~~~~~-~~H~~~V~~vafsP~d~~~l~s~ 330 (357)
T 4g56_B 295 AVLDA--DFSEVFRD-LSHRDFVTGVAWSPLDHSKFTTV 330 (357)
T ss_dssp EEECT--TSCEEEEE-CCCSSCEEEEEECSSSTTEEEEE
T ss_pred EEEEC--CCCcEeEE-CCCCCCEEEEEEeCCCCCEEEEE
Confidence 99998 45555554 48999999999998 67776653
No 36
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.81 E-value=3e-16 Score=208.68 Aligned_cols=214 Identities=12% Similarity=0.147 Sum_probs=150.8
Q ss_pred cccCCCCCCCcceeecCCCCCCeEEEEecCCcEEEEeCCCCcccccccccccceeeeeccCCCCCeeEEEEcCCCCCCCc
Q 000080 32 FIPTAPTRSTSTIDWLPDFAGYSWVAYGASSLLVISHFPSPLSQEEALIGPIFRQVFALSDNSLPVTSISWSPETPSIGQ 111 (2389)
Q Consensus 32 ~ip~ap~~~~~ai~wlpD~~G~~~vAYasg~~vVI~~l~SP~~~~e~~~~p~~~Qviegh~d~~dVk~VaWSPd~~~~Ge 111 (2389)
+.-.+|+....+++|+|| | .++|.|+.+..|..| +..++ +.+ +.+++|.. .|.+++|||+ +..
T Consensus 609 ~~~~~h~~~v~~~~~s~~--~-~~l~s~~~d~~i~vw--~~~~~-~~~------~~~~~h~~--~v~~~~~s~~---~~~ 671 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQD--G-QRIASCGADKTLQVF--KAETG-EKL------LDIKAHED--EVLCCAFSSD---DSY 671 (1249)
T ss_dssp EEECCCSSCEEEEEECTT--S-SEEEEEETTSCEEEE--ETTTC-CEE------EEECCCSS--CEEEEEECTT---SSE
T ss_pred EEEecccccEEEEEECCC--C-CEEEEEeCCCeEEEE--ECCCC-CEE------EEeccCCC--CEEEEEEecC---CCE
Confidence 344578888999999998 7 589999888888888 54333 333 56677766 8999999997 555
Q ss_pred EEE-ecCCeEEEEeeCCCCCCCCccceeeEEe-cccceEEEEeecCC--CCeEEEEecc--eEEeeccCCcEEEEEEeec
Q 000080 112 LAA-ASENCIFVFAHDSASSKGSFCWSQNAIL-VQGTKVEAIEWTGS--GDGIVAGGME--TVLWKKKNTLWEIAWKFKE 185 (2389)
Q Consensus 112 IaA-SyDntIRVw~~d~~~~kgd~~W~~~~tL-~hssTV~sIAWSpd--G~rLaSggdD--V~IW~~~~s~Wecvwt~~~ 185 (2389)
||+ +.|++|+||.... + .+..++ .|...|++++|+|+ +..+++|+.| +++|+..++. ++.++.
T Consensus 672 l~s~~~d~~v~vwd~~~----~----~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~~~~~- 740 (1249)
T 3sfz_A 672 IATCSADKKVKIWDSAT----G----KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CRNTMF- 740 (1249)
T ss_dssp EEEEETTSEEEEEETTT----C----CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EEEEEC-
T ss_pred EEEEeCCCeEEEEECCC----C----ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc--hhheec-
Confidence 554 4589999998762 2 233444 48889999999995 4578899887 9999976654 444444
Q ss_pred cccceEEEEeecCCCc-eEeeecccccccCCC----------------------------------CCC--------Cce
Q 000080 186 NYPQNLVSATWSIEGP-SATAASMSQLDLLGP----------------------------------KEA--------GKC 222 (2389)
Q Consensus 186 ~~~~~ivsvaWSpdG~-fATag~dikf~~~~~----------------------------------~~~--------~kp 222 (2389)
.|...+.+++|+|+|. +||++.+..+..|.. +.+ +..
T Consensus 741 ~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~ 820 (1249)
T 3sfz_A 741 GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNK 820 (1249)
T ss_dssp CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTE
T ss_pred CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCc
Confidence 4667788999999999 999988554222210 000 012
Q ss_pred eEEEeeCCCccceeecccCCCCeeEEEeccCCCCCCCCCCccccCceEEeeecCCeEEEEEeec
Q 000080 223 VFICCSDGKSEYIKLELCHPQPVSMVQWRPSTRRHSPGDTKRSQRHVLLTCCLDGTVRLWCEMD 286 (2389)
Q Consensus 223 V~V~~~dg~~~~~~ve~aH~qdVn~V~W~Ps~~~~~~~Dgk~~~~nILAScSdDgTVRLW~e~d 286 (2389)
+.+|..............|..+|.+++|+| +++ .|++++.||+|++|+...
T Consensus 821 v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp--------~~~-----~l~~~~~dg~v~vwd~~~ 871 (1249)
T 3sfz_A 821 VLLFDIHTSGLLAEIHTGHHSTIQYCDFSP--------YDH-----LAVIALSQYCVELWNIDS 871 (1249)
T ss_dssp EEEEETTTCCEEEEEECSSSSCCCEEEECS--------STT-----EEEEECSSSCEEEEETTT
T ss_pred EEEEEecCCCceeEEcCCCCCceEEEEEcC--------CCC-----EEEEEeCCCeEEEEEcCC
Confidence 233322222222334468999999999999 444 499999999999999553
No 37
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.81 E-value=3.7e-19 Score=207.63 Aligned_cols=172 Identities=15% Similarity=0.140 Sum_probs=143.1
Q ss_pred ccceeeccccccccccccccCCC--C--cCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCc------eeeEecccCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPPA--T--VENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDK------ATATYGVLPA 2262 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~a--t--v~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk------~l~Tl~vl~g 2262 (2389)
..+|+| +.|.+.++|+...... + .+...|.+++|+|+|.+||+|+.|++|++|++..+. ....+
T Consensus 77 ~~l~s~-s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~----- 150 (354)
T 2pbi_B 77 RRIVSS-SQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSV----- 150 (354)
T ss_dssp SEEEEE-ETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEE-----
T ss_pred CEEEEE-eCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceee-----
Confidence 568888 8899999997632211 1 122356899999999999999999999999986542 22333
Q ss_pred CCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecC-CCCEEEEeecCC
Q 000080 2263 ANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITS-SGSVIAAAGHSS 2341 (2389)
Q Consensus 2263 h~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~-DGslLASAG~sS 2341 (2389)
.+|...|++++|+|+|+.|++|+.|++|++||++++ +++.++.+|...|.+++|+|. +|++|||+ +
T Consensus 151 -----~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~-----~~~~~~~~h~~~v~~~~~~~~~~g~~l~sg---s 217 (354)
T 2pbi_B 151 -----AMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG-----QLLQSFHGHGADVLCLDLAPSETGNTFVSG---G 217 (354)
T ss_dssp -----EECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-----CEEEEEECCSSCEEEEEECCCSSCCEEEEE---E
T ss_pred -----eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-----eEEEEEcCCCCCeEEEEEEeCCCCCEEEEE---e
Confidence 247789999999999999999999999999999986 467889999999999999874 57899997 4
Q ss_pred CCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2342 NGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2342 ~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
.|++|++||+ .++++++.+.+|++.|++++++|+|+.+++-+
T Consensus 218 ~Dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 259 (354)
T 2pbi_B 218 CDKKAMVWDM--RSGQCVQAFETHESDVNSVRYYPSGDAFASGS 259 (354)
T ss_dssp TTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCeEEEEEC--CCCcEEEEecCCCCCeEEEEEeCCCCEEEEEe
Confidence 8999999998 57888999999999999999999999877643
No 38
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.80 E-value=6.1e-19 Score=207.79 Aligned_cols=144 Identities=21% Similarity=0.235 Sum_probs=126.0
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.|++++|+|||++||+|+.|++|++||+.+++.+.++. ||...|++++|+|||++|++|+.|++|++||+
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~----------~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~ 194 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ----------GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL 194 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC----------CCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc----------cCCCCEEEEEEcCCCCEEEEecCCCcEEEEEC
Confidence 46999999999999999999999999999999888874 46789999999999999999999999999999
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE-------EeecCcEEEEe
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI-------TCHEGLYDLFL 2373 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL-------~GH~~~V~svA 2373 (2389)
+++ +...++. |...+.+++|+|.+|++||++ +.|++|+|||+ .+++.+..+ .+|.+.|++++
T Consensus 195 ~~~-----~~~~~~~-~~~~v~~~~~~~~~~~~l~~~---s~d~~v~iwd~--~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 195 RTG-----QCSLTLS-IEDGVTTVAVSPGDGKYIAAG---SLDRAVRVWDS--ETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp TTT-----EEEEEEE-CSSCEEEEEECSTTCCEEEEE---ETTSCEEEEET--TTCCEEEEEC------CCCSSCEEEEE
T ss_pred CCC-----eeEEEEE-cCCCcEEEEEECCCCCEEEEE---cCCCcEEEEEC--CCCcEEEeecccccCCCCCCCCEEEEE
Confidence 986 2344443 667899999999889999997 48999999998 456667666 68999999999
Q ss_pred ecccchhhhccc
Q 000080 2374 PLKLLNFALSKC 2385 (2389)
Q Consensus 2374 ~~~~~~~~~s~~ 2385 (2389)
++|+|++.++-+
T Consensus 264 ~~~~g~~l~s~s 275 (393)
T 1erj_A 264 FTRDGQSVVSGS 275 (393)
T ss_dssp ECTTSSEEEEEE
T ss_pred ECCCCCEEEEEe
Confidence 999999887643
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.80 E-value=2.6e-19 Score=205.52 Aligned_cols=175 Identities=11% Similarity=0.020 Sum_probs=131.9
Q ss_pred ccceeecccccccccccccc----CCCCcC--ceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCc---eeeEecccCCC
Q 000080 2193 GIGASALGWETQDDFEDYVD----PPATVE--NISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDK---ATATYGVLPAA 2263 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d----~~atv~--ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk---~l~Tl~vl~gh 2263 (2389)
...|+| +.+...++|+... ...++. .-.|.+++|+|+|++||+|+.|++|++||+.+++ ...++
T Consensus 24 ~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~------ 96 (377)
T 3dwl_C 24 TEFVTT-TATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVL------ 96 (377)
T ss_dssp SEEECC-CSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEEC------
T ss_pred CEEEEe-cCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEe------
Confidence 456666 6677777777642 223332 2467999999999999999999999999999887 34433
Q ss_pred CCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeee-cCCCeeEEEEecCCCCEEEEeecCCC
Q 000080 2264 NVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLC-FSSHAMDVSYITSSGSVIAAAGHSSN 2342 (2389)
Q Consensus 2264 ~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~g-Hs~~V~sVAFSP~DGslLASAG~sS~ 2342 (2389)
.+|...|++++|+|||+.||+|+.|++|++||++++. .......+.+ |...|.+++|+| +|++||++ +.
T Consensus 97 ----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~---~~ 166 (377)
T 3dwl_C 97 ----LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN--DWWVSKHLKRPLRSTILSLDWHP-NNVLLAAG---CA 166 (377)
T ss_dssp ----CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-------CCCCEEECSSCCSCEEEEEECT-TSSEEEEE---ES
T ss_pred ----cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcc--cceeeeEeecccCCCeEEEEEcC-CCCEEEEE---eC
Confidence 2467899999999999999999999999999999862 1124667777 999999999999 99999997 48
Q ss_pred CCeEEEeeCCC----------------CCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2343 GINVVVWDTLA----------------PPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2343 D~TVrLWD~l~----------------~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
|++|++||+.. +.+++++.+ +|.+.|.+++++|+|+++++-+
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~ 224 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAG 224 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEE
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEe
Confidence 99999999721 124456667 9999999999999999887643
No 40
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.80 E-value=2.2e-18 Score=202.64 Aligned_cols=202 Identities=11% Similarity=0.070 Sum_probs=140.8
Q ss_pred CCCCCCcceeecCCCCCCeEEEEec--CCcEEEEeCCCCcccccccccccceeeeeccCCCCCeeEEEEcCCCCCCCcEE
Q 000080 36 APTRSTSTIDWLPDFAGYSWVAYGA--SSLLVISHFPSPLSQEEALIGPIFRQVFALSDNSLPVTSISWSPETPSIGQLA 113 (2389)
Q Consensus 36 ap~~~~~ai~wlpD~~G~~~vAYas--g~~vVI~~l~SP~~~~e~~~~p~~~Qviegh~d~~dVk~VaWSPd~~~~GeIa 113 (2389)
.|..-++.++|+|| | .++|.|+ ....|..| ++.+. +.. ..++ |.. +|.+|+|||| +..++
T Consensus 131 ~~~~~~~~v~fSpD--g-~~la~as~~~d~~i~iw--d~~~~-~~~------~~~~-~~~--~V~~v~fspd---g~~l~ 192 (365)
T 4h5i_A 131 NADDYTKLVYISRE--G-TVAAIASSKVPAIMRII--DPSDL-TEK------FEIE-TRG--EVKDLHFSTD---GKVVA 192 (365)
T ss_dssp CTTCCEEEEEECTT--S-SCEEEEESCSSCEEEEE--ETTTT-EEE------EEEE-CSS--CCCEEEECTT---SSEEE
T ss_pred CcccCEEEEEEcCC--C-CEEEEEECCCCCEEEEe--ECCCC-cEE------EEeC-CCC--ceEEEEEccC---CceEE
Confidence 44445678999999 7 3665555 45788888 65444 222 3344 333 6999999998 44455
Q ss_pred EecCCeEEEEeeCCCCCCCCccceeeEEe-cccceEEEEeecCCCCeEEEEecc------eEEeeccCCcEEEEEEe-ec
Q 000080 114 AASENCIFVFAHDSASSKGSFCWSQNAIL-VQGTKVEAIEWTGSGDGIVAGGME------TVLWKKKNTLWEIAWKF-KE 185 (2389)
Q Consensus 114 ASyDntIRVw~~d~~~~kgd~~W~~~~tL-~hssTV~sIAWSpdG~rLaSggdD------V~IW~~~~s~Wecvwt~-~~ 185 (2389)
+++++++++|+... + ......+. .|...|++++|+|+|+++++++.+ +.+|+.........-.. ..
T Consensus 193 s~s~~~~~~~~~~~----~--~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~ 266 (365)
T 4h5i_A 193 YITGSSLEVISTVT----G--SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT 266 (365)
T ss_dssp EECSSCEEEEETTT----C--CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccceeEEEEEecc----C--cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeec
Confidence 56788899988652 1 12222222 378899999999999999988865 55677665555443221 23
Q ss_pred cccceEEEEeecCCCc-eEeeecccccccCCCCCCCceeEEEeeCCCccceeecccCCCCeeEEEeccCCCCCCCCCCcc
Q 000080 186 NYPQNLVSATWSIEGP-SATAASMSQLDLLGPKEAGKCVFICCSDGKSEYIKLELCHPQPVSMVQWRPSTRRHSPGDTKR 264 (2389)
Q Consensus 186 ~~~~~ivsvaWSpdG~-fATag~dikf~~~~~~~~~kpV~V~~~dg~~~~~~ve~aH~qdVn~V~W~Ps~~~~~~~Dgk~ 264 (2389)
.|...+.+++|||||. +|||+.|.. |.+|.............+|...|++|+|+| ||+.
T Consensus 267 ~~~~~V~~~~~Spdg~~lasgs~D~~------------V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp--------dg~~ 326 (365)
T 4h5i_A 267 NRFKGITSMDVDMKGELAVLASNDNS------------IALVKLKDLSMSKIFKQAHSFAITEVTISP--------DSTY 326 (365)
T ss_dssp SSCSCEEEEEECTTSCEEEEEETTSC------------EEEEETTTTEEEEEETTSSSSCEEEEEECT--------TSCE
T ss_pred CCCCCeEeEEECCCCCceEEEcCCCE------------EEEEECCCCcEEEEecCcccCCEEEEEECC--------CCCE
Confidence 3556788999999999 999998743 555533222222334578999999999999 7777
Q ss_pred ccCceEEeeecCCeEEEEEeec
Q 000080 265 SQRHVLLTCCLDGTVRLWCEMD 286 (2389)
Q Consensus 265 ~~~nILAScSdDgTVRLW~e~d 286 (2389)
|||||.|+|||||++..
T Consensus 327 -----laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 327 -----VASVSAANTIHIIKLPL 343 (365)
T ss_dssp -----EEEEETTSEEEEEECCT
T ss_pred -----EEEEeCCCeEEEEEcCC
Confidence 99999999999999754
No 41
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.80 E-value=8e-19 Score=202.40 Aligned_cols=137 Identities=15% Similarity=0.269 Sum_probs=117.7
Q ss_pred eEEEEEE-----cC-CCCeEEEEeCCCcEEEeecCCCc-------eeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEE
Q 000080 2221 STRAFSS-----HP-LRPFFLVGSSNTHIYLWEFGKDK-------ATATYGVLPAANVPPPYALASISALQFDHYGHRFA 2287 (2389)
Q Consensus 2221 ~VrsVAF-----sP-dG~~LASGS~DgTIRLWDl~tGk-------~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LA 2287 (2389)
.|++|+| +| |+++|||||.|++||+||+.+++ +..++ .||...|++|+|+|+|++||
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l----------~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKAL----------TGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEE----------CCCSSCEEEEEECSSTTEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchh----------ccCCCceEEEEECCCCCEEE
Confidence 4599999 77 99999999999999999997543 34444 25778999999999999999
Q ss_pred EEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE---e
Q 000080 2288 SAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT---C 2364 (2389)
Q Consensus 2288 SgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~---G 2364 (2389)
||+.|++|+|||++++ +.+.++.+|...|.+++|+| +|++|||+| .|++|+|||+. +.+...+. +
T Consensus 93 s~s~D~~v~lwd~~~~-----~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~---~d~~i~~wd~~---~~~~~~~~~~~~ 160 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTG-----TTYKRFVGHQSEVYSVAFSP-DNRQILSAG---AEREIKLWNIL---GECKFSSAEKEN 160 (343)
T ss_dssp EEETTSEEEEEETTSS-----CEEEEEECCCSCEEEEEECS-STTEEEEEE---TTSCEEEEESS---SCEEEECCTTTS
T ss_pred EEcCCCcEEEEECCCC-----cEEEEEcCCCCcEEEEEECC-CCCEEEEEc---CCCEEEEEecc---CCceeeeecccC
Confidence 9999999999999986 46788899999999999999 999999974 89999999983 44444444 8
Q ss_pred ecCcEEEEeecccch
Q 000080 2365 HEGLYDLFLPLKLLN 2379 (2389)
Q Consensus 2365 H~~~V~svA~~~~~~ 2379 (2389)
|...|.+++++|++.
T Consensus 161 ~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 161 HSDWVSCVRYSPIMK 175 (343)
T ss_dssp CSSCEEEEEECCCCC
T ss_pred CCceeeeeeeccccc
Confidence 999999999999873
No 42
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.79 E-value=2e-18 Score=191.68 Aligned_cols=184 Identities=13% Similarity=0.132 Sum_probs=139.2
Q ss_pred cccceeeccccccccccccccC--CCCc----CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDP--PATV----ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANV 2265 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~--~atv----~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~ 2265 (2389)
++++|.| -|.+.++|+.... ..++ +...|.+|+|+|+|++|||||.|++|++||+.+++++.++. +|..
T Consensus 36 ~~~lAvg--~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~---~h~~ 110 (318)
T 4ggc_A 36 GNVLAVA--LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT---SHSA 110 (318)
T ss_dssp TSEEEEE--ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---CCSS
T ss_pred CCEEEEE--eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec---Cccc
Confidence 3467766 3778888886422 1111 22457999999999999999999999999999999887764 3331
Q ss_pred C----------------------------------CCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccc
Q 000080 2266 P----------------------------------PPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPM 2311 (2389)
Q Consensus 2266 p----------------------------------~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l 2311 (2389)
. ..+|...+..++|+++|+.|++++.||+|++||++++.. .....
T Consensus 111 ~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~ 189 (318)
T 4ggc_A 111 RVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG-GWVPL 189 (318)
T ss_dssp CEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT-BSCCS
T ss_pred eEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc-cccce
Confidence 1 356888999999999999999999999999999987521 00111
Q ss_pred eee--------------------------------------------eecCCCeeEEEEecCCCCEEEEeecCCCCCeEE
Q 000080 2312 ESC--------------------------------------------LCFSSHAMDVSYITSSGSVIAAAGHSSNGINVV 2347 (2389)
Q Consensus 2312 ~tl--------------------------------------------~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVr 2347 (2389)
... ..|...+..++|+| ++..+++++ ++.|++|+
T Consensus 190 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~s-g~~d~~i~ 267 (318)
T 4ggc_A 190 QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSP-HYKELISGH-GFAQNQLV 267 (318)
T ss_dssp EEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEET-TTTEEEEEE-CTTTCCEE
T ss_pred eeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecc-cccceEEEE-EcCCCEEE
Confidence 111 22444566777777 566666543 36899999
Q ss_pred EeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2348 VWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2348 LWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
|||+ .++++++.|.||++.|++++++|+|++.+|-+
T Consensus 268 iwd~--~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 268 IWKY--PTMAKVAELKGHTSRVLSLTMSPDGATVASAA 303 (318)
T ss_dssp EEET--TTCCEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEC--CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 9998 57888999999999999999999999988743
No 43
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.79 E-value=3.3e-19 Score=204.10 Aligned_cols=187 Identities=18% Similarity=0.145 Sum_probs=142.1
Q ss_pred ccccccccccceeeccccccccccccccCC----CCc--CceeEEEEEEcCC--CCeEEEEeCCCcEEEeecCCCceeeE
Q 000080 2185 AFGIPGYAGIGASALGWETQDDFEDYVDPP----ATV--ENISTRAFSSHPL--RPFFLVGSSNTHIYLWEFGKDKATAT 2256 (2389)
Q Consensus 2185 ~~~~~g~~~~~Asg~~~d~~~~~~~~~d~~----atv--~ni~VrsVAFsPd--G~~LASGS~DgTIRLWDl~tGk~l~T 2256 (2389)
+|.-+....++|++ ++|.+.++|+..... .+. +.-.|++|+|+|+ |.+||+|+.|++|++||+.++.....
T Consensus 64 ~~~~~~~~~~l~s~-s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 64 AWAHPMYGNILASC-SYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp EECCGGGSSCEEEE-ETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred EeCCCCCCCEEEEE-ECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 34333334678888 899999999875321 111 1235699999998 88999999999999999987643221
Q ss_pred ecccCCCCCCCCCCCCCEEEEEECCC-----------------CCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCC
Q 000080 2257 YGVLPAANVPPPYALASISALQFDHY-----------------GHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSS 2319 (2389)
Q Consensus 2257 l~vl~gh~~p~~GH~~~V~sVaFSPD-----------------G~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~ 2319 (2389)
...+ .+|...|.+++|+|+ |++||+|+.|++|+|||++.++ ..++..++.+|..
T Consensus 143 ~~~~-------~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~--~~~~~~~l~~h~~ 213 (316)
T 3bg1_A 143 KKIN-------NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG--QWKEEQKLEAHSD 213 (316)
T ss_dssp CCBT-------TSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS--CEEEEECCBCCSS
T ss_pred eeee-------ccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC--ccceeeecccCCC
Confidence 1111 356788999999998 5799999999999999997542 1235677899999
Q ss_pred CeeEEEEecCCC----CEEEEeecCCCCCeEEEeeCCCCC-CC-ceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2320 HAMDVSYITSSG----SVIAAAGHSSNGINVVVWDTLAPP-TS-SRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2320 ~V~sVAFSP~DG----slLASAG~sS~D~TVrLWD~l~~t-g~-~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
.|++|+|+| ++ ++|||+ +.|++|+|||+.... +. ..+.+.+|.+.|++++++|+|++.++-+
T Consensus 214 ~V~~v~~sp-~~~~~~~~las~---s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 214 WVRDVAWAP-SIGLPTSTIASC---SQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp CEEEEECCC-CSSCSCCEEEEE---ETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEE
T ss_pred ceEEEEecC-CCCCCCceEEEE---cCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEc
Confidence 999999999 65 899997 589999999974211 12 2456788999999999999999877643
No 44
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.79 E-value=3.3e-19 Score=212.43 Aligned_cols=144 Identities=18% Similarity=0.217 Sum_probs=119.4
Q ss_pred eEEEEEEcCC-CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECC-CCCEEEEEeCCCcEEEe
Q 000080 2221 STRAFSSHPL-RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDH-YGHRFASAALDGTVCTW 2298 (2389)
Q Consensus 2221 ~VrsVAFsPd-G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSP-DG~~LASgS~DgTVkLW 2298 (2389)
.|.+|+|||+ +.+||+|+.||+|+|||+.+++....+. ..||.+.|++|+|+| ||++|+|||.||+|++|
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~--------~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIK--------GIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEEC--------CCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEE--------ccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 4799999994 6699999999999999998887655443 136789999999998 68999999999999999
Q ss_pred eCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccc
Q 000080 2299 QLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~ 2378 (2389)
|++++ ..+.+.....+...+.+++|+| +|++||+| +.|++|+|||+ .++.+..+.+|.+.|++++++|++
T Consensus 193 d~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g---~~dg~i~~wd~---~~~~~~~~~~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 193 DFKGN---ILRVFASSDTINIWFCSLDVSA-SSRMVVTG---DNVGNVILLNM---DGKELWNLRMHKKKVTHVALNPCC 262 (435)
T ss_dssp ETTSC---EEEEEECCSSCSCCCCCEEEET-TTTEEEEE---CSSSBEEEEES---SSCBCCCSBCCSSCEEEEEECTTC
T ss_pred eccCC---ceeEEeccCCCCccEEEEEECC-CCCEEEEE---eCCCcEeeecc---CcceeEEEecccceEEeeeecCCC
Confidence 99864 1123333334555678999999 99999996 58999999997 467788999999999999999999
Q ss_pred hhhh
Q 000080 2379 NFAL 2382 (2389)
Q Consensus 2379 ~~~~ 2382 (2389)
+..|
T Consensus 263 ~~~~ 266 (435)
T 4e54_B 263 DWFL 266 (435)
T ss_dssp SSEE
T ss_pred ceEE
Confidence 8654
No 45
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.79 E-value=7.7e-19 Score=206.04 Aligned_cols=176 Identities=13% Similarity=0.183 Sum_probs=140.0
Q ss_pred ccceeeccccccccccccccC---------CCCcC--ceeEEEEEEcCCC-CeEEEEeCCCcEEEeecCCCceeeEeccc
Q 000080 2193 GIGASALGWETQDDFEDYVDP---------PATVE--NISTRAFSSHPLR-PFFLVGSSNTHIYLWEFGKDKATATYGVL 2260 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~---------~atv~--ni~VrsVAFsPdG-~~LASGS~DgTIRLWDl~tGk~l~Tl~vl 2260 (2389)
...|+| ++|...++|+.... ...+. .-.|.+++|+|++ ..|+|||.|++|++||+.+|+++.++..
T Consensus 121 ~~las~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~- 198 (380)
T 3iz6_a 121 QSVACG-GLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGS- 198 (380)
T ss_dssp SEEEEC-CSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECC-
T ss_pred CEEEEe-eCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeec-
Confidence 345666 67777777765311 01111 1245788999985 4799999999999999999999888741
Q ss_pred CCCCCCCCCCCCCEEEEEECC-CCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeec
Q 000080 2261 PAANVPPPYALASISALQFDH-YGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGH 2339 (2389)
Q Consensus 2261 ~gh~~p~~GH~~~V~sVaFSP-DG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~ 2339 (2389)
. .+.||...|.+++|+| +++.|+||+.||+|++||++..+ +++.++.+|.+.|++|+|+| +|++|||+
T Consensus 199 --~--~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~----~~~~~~~~h~~~v~~v~~~p-~~~~l~s~-- 267 (380)
T 3iz6_a 199 --E--FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS----RAVRTYHGHEGDINSVKFFP-DGQRFGTG-- 267 (380)
T ss_dssp --C--SSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC----CCCEEECCCSSCCCEEEECT-TSSEEEEE--
T ss_pred --c--cCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC----cceEEECCcCCCeEEEEEec-CCCeEEEE--
Confidence 1 1247889999999987 89999999999999999998643 56788899999999999999 99999997
Q ss_pred CCCCCeEEEeeCCCCCCCceEEEEeecC-------cEEEEeecccchhhhcc
Q 000080 2340 SSNGINVVVWDTLAPPTSSRASITCHEG-------LYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2340 sS~D~TVrLWD~l~~tg~~v~sL~GH~~-------~V~svA~~~~~~~~~s~ 2384 (2389)
+.|++|+|||+ .++++++.+..|.. .|++++++|+|+++++-
T Consensus 268 -s~D~~i~lwd~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g 316 (380)
T 3iz6_a 268 -SDDGTCRLFDM--RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAG 316 (380)
T ss_dssp -CSSSCEEEEET--TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEE
T ss_pred -cCCCeEEEEEC--CCCcEEEEecccccccccccCceEEEEECCCCCEEEEE
Confidence 59999999998 46777888876543 48999999999988764
No 46
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.79 E-value=1.5e-18 Score=191.56 Aligned_cols=180 Identities=13% Similarity=0.059 Sum_probs=141.3
Q ss_pred ccccceeeccccccccccccccCCC------Cc--CceeEEEEEEcC--CCCeEEEEeCCCcEEEeecCCC---------
Q 000080 2191 YAGIGASALGWETQDDFEDYVDPPA------TV--ENISTRAFSSHP--LRPFFLVGSSNTHIYLWEFGKD--------- 2251 (2389)
Q Consensus 2191 ~~~~~Asg~~~d~~~~~~~~~d~~a------tv--~ni~VrsVAFsP--dG~~LASGS~DgTIRLWDl~tG--------- 2251 (2389)
....+|++ +.|...++|+...... ++ +.-.|.+++|+| |+++|++|+.|++|++||+.++
T Consensus 22 ~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 100 (351)
T 3f3f_A 22 YGRHVATC-SSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRW 100 (351)
T ss_dssp SSSEEEEE-ETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSE
T ss_pred CCCEEEEe-eCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCc
Confidence 34467777 7888888888753211 11 224679999999 6999999999999999999887
Q ss_pred ceeeEecccCCCCCCCCCCCCCEEEEEECCC--CCEEEEEeCCCcEEEeeCCCCCcc-----------------------
Q 000080 2252 KATATYGVLPAANVPPPYALASISALQFDHY--GHRFASAALDGTVCTWQLEVGGRS----------------------- 2306 (2389)
Q Consensus 2252 k~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD--G~~LASgS~DgTVkLWDl~tggrs----------------------- 2306 (2389)
+.+.++. +|...|++++|+|+ |+.|++|+.||+|++||++++...
T Consensus 101 ~~~~~~~----------~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (351)
T 3f3f_A 101 NKLCTLN----------DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSD 170 (351)
T ss_dssp EEEEEEC----------CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCC
T ss_pred ceeeeec----------ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccce
Confidence 4455552 46788999999999 999999999999999999875210
Q ss_pred --------------------------------CcccceeeeecCCCeeEEEEecCCC----CEEEEeecCCCCCeEEEee
Q 000080 2307 --------------------------------NVRPMESCLCFSSHAMDVSYITSSG----SVIAAAGHSSNGINVVVWD 2350 (2389)
Q Consensus 2307 --------------------------------~~k~l~tl~gHs~~V~sVAFSP~DG----slLASAG~sS~D~TVrLWD 2350 (2389)
....+..+.+|...|.+++|+| +| ++|||+ +.|++|+|||
T Consensus 171 ~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~~~~~l~s~---~~dg~i~iwd 246 (351)
T 3f3f_A 171 FCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGRWYQLIATG---CKDGRIRIFK 246 (351)
T ss_dssp EEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-CSSCSSEEEEEE---ETTSCEEEEE
T ss_pred eEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-CCCCcceEEEEE---cCCCeEEEEe
Confidence 0012556778999999999999 77 799987 4899999999
Q ss_pred CCCC--------------------------------------------CCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2351 TLAP--------------------------------------------PTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2351 ~l~~--------------------------------------------tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+... +.+.+..+.+|.+.|++++++|+|++.++-+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 325 (351)
T 3f3f_A 247 ITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAG 325 (351)
T ss_dssp EEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEE
T ss_pred CCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEec
Confidence 8421 1145778899999999999999999887754
No 47
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.79 E-value=1.5e-19 Score=207.09 Aligned_cols=175 Identities=10% Similarity=0.052 Sum_probs=138.1
Q ss_pred ccccceeeccccccccccccccC----CCCcC--ceeEEEEEEcC--CCCeEEEEeCCCcEEEeecCCCc--eeeEeccc
Q 000080 2191 YAGIGASALGWETQDDFEDYVDP----PATVE--NISTRAFSSHP--LRPFFLVGSSNTHIYLWEFGKDK--ATATYGVL 2260 (2389)
Q Consensus 2191 ~~~~~Asg~~~d~~~~~~~~~d~----~atv~--ni~VrsVAFsP--dG~~LASGS~DgTIRLWDl~tGk--~l~Tl~vl 2260 (2389)
.+.++|+| ++|.+.++|+.... ..++. .-.|++|+|+| +|++|||||.|++|++||+.+++ ++.++.
T Consensus 24 ~g~~lasg-s~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~-- 100 (316)
T 3bg1_A 24 YGTRLATC-SSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHA-- 100 (316)
T ss_dssp GGCEEEEE-ETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEEC--
T ss_pred CCCEEEEE-eCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEcc--
Confidence 34578899 89999999987532 12221 24679999976 48999999999999999998875 444442
Q ss_pred CCCCCCCCCCCCCEEEEEECCC--CCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCC--------
Q 000080 2261 PAANVPPPYALASISALQFDHY--GHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSS-------- 2330 (2389)
Q Consensus 2261 ~gh~~p~~GH~~~V~sVaFSPD--G~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~D-------- 2330 (2389)
+|...|++|+|+|+ |+.||+|+.|++|++||++.++ .......+.+|...|.+++|+| +
T Consensus 101 --------~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~--~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~ 169 (316)
T 3bg1_A 101 --------GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG--QWEVKKINNAHTIGCNAVSWAP-AVVPGSLID 169 (316)
T ss_dssp --------CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSS--CEEECCBTTSSSSCBCCCEECC-CCCC-----
T ss_pred --------CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC--CcceeeeeccccCCcceEEEcc-ccCCccccc
Confidence 56789999999998 8999999999999999998752 1122455678999999999999 5
Q ss_pred ---------CCEEEEeecCCCCCeEEEeeCCCCCC--CceEEEEeecCcEEEEeecccc----hhhhc
Q 000080 2331 ---------GSVIAAAGHSSNGINVVVWDTLAPPT--SSRASITCHEGLYDLFLPLKLL----NFALS 2383 (2389)
Q Consensus 2331 ---------GslLASAG~sS~D~TVrLWD~l~~tg--~~v~sL~GH~~~V~svA~~~~~----~~~~s 2383 (2389)
|++|||+ +.|++|+|||+. ..+ ++++.|.+|.+.|++++++|++ +.++|
T Consensus 170 ~~~~~~~~~~~~l~sg---s~D~~v~lWd~~-~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las 233 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASG---GCDNLIKLWKEE-EDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIAS 233 (316)
T ss_dssp -CCSCCCCCCCBEECC---BTTSBCCEEEEC-TTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEE
T ss_pred cccccCccccceEEEe---cCCCeEEEEEeC-CCCccceeeecccCCCceEEEEecCCCCCCCceEEE
Confidence 5789986 589999999983 111 3577899999999999999987 55554
No 48
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.78 E-value=4.1e-18 Score=201.73 Aligned_cols=187 Identities=14% Similarity=0.181 Sum_probs=145.0
Q ss_pred cccceeeccccccccccccccCC--CC--c--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDPP--AT--V--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANV 2265 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~--at--v--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~ 2265 (2389)
+.++|-|+ |.+.++|+..... .. . ++..|.+|+|+|||++||+|+.|++|+|||+.+++++.++. +|..
T Consensus 116 ~n~lAvgl--d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~---~h~~ 190 (420)
T 4gga_A 116 GNVLAVAL--DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT---SHSA 190 (420)
T ss_dssp TSEEEEEE--TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---CCSS
T ss_pred CCEEEEEe--CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEe---CCCC
Confidence 45777663 7889999874221 11 1 12457999999999999999999999999999999887764 3431
Q ss_pred C----------------------------------CCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccc
Q 000080 2266 P----------------------------------PPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPM 2311 (2389)
Q Consensus 2266 p----------------------------------~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l 2311 (2389)
. ..+|...|..+.++|+|+.+++++.||+|++||+.++. .....+
T Consensus 191 ~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~-~~~~~~ 269 (420)
T 4gga_A 191 RVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE-GGWVPL 269 (420)
T ss_dssp CEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCS-SCSCCS
T ss_pred ceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccc-ccceee
Confidence 1 35788999999999999999999999999999998863 222456
Q ss_pred eeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCC---------------------------------------
Q 000080 2312 ESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTL--------------------------------------- 2352 (2389)
Q Consensus 2312 ~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l--------------------------------------- 2352 (2389)
.....|...|.+++|+|.++.++|++| ++.|++|+|||+.
T Consensus 270 ~~~~~~~~~V~~~~~~p~~~~~la~~~-gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~i 348 (420)
T 4gga_A 270 QTFTQHQGAVKAVAWCPWQSNVLATGG-GTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVI 348 (420)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEE-CTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEE
T ss_pred eeecccCCceeeeeeCCCcccEEEEEe-ecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEE
Confidence 677788888888888887677777654 4567777777641
Q ss_pred --CCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2353 --APPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2353 --~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
.+++++++.|.||++.|++++++|+|++++|-+
T Consensus 349 wd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s 383 (420)
T 4gga_A 349 WKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAA 383 (420)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 134566788999999999999999999988753
No 49
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.78 E-value=7.3e-19 Score=209.48 Aligned_cols=179 Identities=12% Similarity=0.003 Sum_probs=138.8
Q ss_pred ccccccceeeccccccccccccccCC--CCc----CceeEEEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecccC
Q 000080 2189 PGYAGIGASALGWETQDDFEDYVDPP--ATV----ENISTRAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGVLP 2261 (2389)
Q Consensus 2189 ~g~~~~~Asg~~~d~~~~~~~~~d~~--atv----~ni~VrsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~ 2261 (2389)
|-...++|+| +.|...++|++.... ..+ +.-.|.+|+|+| ++.+|+|||.|++|++||+.++.. .++. .
T Consensus 129 P~~~~~lasG-s~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~-~~~~--~ 204 (435)
T 4e54_B 129 PTHPSTVAVG-SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL-RVFA--S 204 (435)
T ss_dssp SSCTTCEEEE-ETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE-EEEE--C
T ss_pred CCCCCEEEEE-eCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce-eEEe--c
Confidence 3445688999 899999999874221 111 123679999998 689999999999999999975544 4443 1
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCC
Q 000080 2262 AANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSS 2341 (2389)
Q Consensus 2262 gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS 2341 (2389)
.| .+...|.+++|+|||++||+|+.||+|++||++. +.+.++.+|...|.+++|+|.+..+||++ +
T Consensus 205 ~~-----~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~------~~~~~~~~h~~~v~~v~~~p~~~~~~~s~---s 270 (435)
T 4e54_B 205 SD-----TINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG------KELWNLRMHKKKVTHVALNPCCDWFLATA---S 270 (435)
T ss_dssp CS-----SCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS------CBCCCSBCCSSCEEEEEECTTCSSEEEEE---E
T ss_pred cC-----CCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc------ceeEEEecccceEEeeeecCCCceEEEEe---c
Confidence 22 2446789999999999999999999999999974 35677889999999999999333478886 4
Q ss_pred CCCeEEEeeCCCCCCC-ceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2342 NGINVVVWDTLAPPTS-SRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2342 ~D~TVrLWD~l~~tg~-~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
.|++|+|||+...... .+....+|.+.|++++++|+|++.++-+
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~ 315 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD 315 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc
Confidence 8999999998422211 2344578999999999999999988755
No 50
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.78 E-value=6.4e-19 Score=211.20 Aligned_cols=167 Identities=8% Similarity=0.003 Sum_probs=125.8
Q ss_pred ccccccccccccccCCCC-----cCceeEEEEEEcC---CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCC
Q 000080 2199 LGWETQDDFEDYVDPPAT-----VENISTRAFSSHP---LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYA 2270 (2389)
Q Consensus 2199 ~~~d~~~~~~~~~d~~at-----v~ni~VrsVAFsP---dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH 2270 (2389)
-+.+.+.+++++...-+. .+...++.++|+| ++.+|||||.|+||||||+.+|++++++. +|. .|
T Consensus 153 ~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~---g~~----~~ 225 (356)
T 2w18_A 153 TLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMH---IDD----SY 225 (356)
T ss_dssp SSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEE---CCC------
T ss_pred cCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEc---CCC----cc
Confidence 468999999998432222 2223557789999 78999999999999999999999999985 331 23
Q ss_pred CCCEEEEEECCCCCEE------------EEEeCCCcEEEeeCCCCCccCcccceee-----eecCCCeeEEEEecCCCCE
Q 000080 2271 LASISALQFDHYGHRF------------ASAALDGTVCTWQLEVGGRSNVRPMESC-----LCFSSHAMDVSYITSSGSV 2333 (2389)
Q Consensus 2271 ~~~V~sVaFSPDG~~L------------ASgS~DgTVkLWDl~tggrs~~k~l~tl-----~gHs~~V~sVAFSP~DGsl 2333 (2389)
...|.+++|||||+++ |||+.|+||++||+.++ +.+..+ .||.....+..++ |.+
T Consensus 226 v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg-----k~l~v~~~~~p~Gh~~~~lsg~~s---g~~ 297 (356)
T 2w18_A 226 QASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT-----LSVGVMLYCLPPGQAGRFLEGDVK---DHC 297 (356)
T ss_dssp -CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT-----EEEEEEEECCCTTCCCCEEEEEEE---TTE
T ss_pred eeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC-----EEEEEEEeeccCCCcceeEccccC---CCE
Confidence 4679999999999987 77999999999999986 233333 3777665544444 688
Q ss_pred EEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEE-EEeecccchhhhccc
Q 000080 2334 IAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYD-LFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2334 LASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~-svA~~~~~~~~~s~~ 2385 (2389)
+|++ +.|+||||||+ .+++++++|.+|.+.+. +++++|+|++.+|-+
T Consensus 298 lASg---S~DgTIkIWDl--~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 298 AAAI---LTSGTIAIWDL--LLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp EEEE---ETTSCEEEEET--TTCSEEEEECCC--CCCCEEEECSSSSEEEEEC
T ss_pred EEEE---cCCCcEEEEEC--CCCcEEEEecCCCCCeEEEEEECCCCCEEEEEE
Confidence 9986 58999999998 68899999999998876 599999999988755
No 51
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.78 E-value=3.7e-18 Score=191.84 Aligned_cols=176 Identities=10% Similarity=0.100 Sum_probs=141.9
Q ss_pred cccceeeccccccccccccccCCCCc------CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDPPATV------ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANV 2265 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~atv------~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~ 2265 (2389)
...+|+| +.|...++|+.......+ +.-.|.+++|+|++++|++|+.|++|++||+.+++.+...
T Consensus 54 g~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-------- 124 (368)
T 3mmy_A 54 GNFLIAG-SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIA-------- 124 (368)
T ss_dssp SEEEEEE-ETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--------
T ss_pred ceEEEEE-CCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeec--------
Confidence 3677888 778888888875311111 1246799999999999999999999999999999877654
Q ss_pred CCCCCCCCEEEEEE--CCCCCEEEEEeCCCcEEEeeCCCCCccC------------------------------------
Q 000080 2266 PPPYALASISALQF--DHYGHRFASAALDGTVCTWQLEVGGRSN------------------------------------ 2307 (2389)
Q Consensus 2266 p~~GH~~~V~sVaF--SPDG~~LASgS~DgTVkLWDl~tggrs~------------------------------------ 2307 (2389)
+|...|++++| +|+|+.|++|+.||+|++||++++....
T Consensus 125 ---~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 201 (368)
T 3mmy_A 125 ---QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQP 201 (368)
T ss_dssp ---ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSC
T ss_pred ---cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecccc
Confidence 25688999999 9999999999999999999998752000
Q ss_pred -------------------------------------------------cccceeeeecCC------------CeeEEEE
Q 000080 2308 -------------------------------------------------VRPMESCLCFSS------------HAMDVSY 2326 (2389)
Q Consensus 2308 -------------------------------------------------~k~l~tl~gHs~------------~V~sVAF 2326 (2389)
......+.+|.. .|.+++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 281 (368)
T 3mmy_A 202 SEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAF 281 (368)
T ss_dssp EEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEE
T ss_pred chhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEE
Confidence 012234455554 6999999
Q ss_pred ecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2327 ITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2327 SP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+| +|++||++| .|++|+|||+ .++++++.+.+|.+.|++++++|+|++.++-.
T Consensus 282 sp-~~~~l~s~~---~dg~i~iwd~--~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 282 HP-VHGTLATVG---SDGRFSFWDK--DARTKLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp CT-TTCCEEEEE---TTSCEEEEET--TTTEEEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred ec-CCCEEEEEc---cCCeEEEEEC--CCCcEEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 99 999999974 8999999998 46788999999999999999999999987654
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.78 E-value=1.9e-18 Score=200.69 Aligned_cols=158 Identities=13% Similarity=0.152 Sum_probs=124.5
Q ss_pred ceeeccccccccccccc--cCCCCcCc-eeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCC
Q 000080 2195 GASALGWETQDDFEDYV--DPPATVEN-ISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYAL 2271 (2389)
Q Consensus 2195 ~Asg~~~d~~~~~~~~~--d~~atv~n-i~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~ 2271 (2389)
+|++ +.|...++|+.. .....+.. -.+...+|+|+|++||+|+.|++|++||+.+++++..+. +|.
T Consensus 71 l~~~-~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----------~h~ 139 (420)
T 3vl1_A 71 LYKA-RLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ----------AHV 139 (420)
T ss_dssp EEEE-EETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT----------SSS
T ss_pred EEEE-EcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc----------ccc
Confidence 4444 455566666553 12222222 123455799999999999999999999999888877653 467
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeC
Q 000080 2272 ASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDT 2351 (2389)
Q Consensus 2272 ~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~ 2351 (2389)
..|++++|+|||+.||+|+.||+|++||++++ +.+.++.+|...|.+++|+| +|++||++ +.|++|++||+
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-----~~~~~~~~h~~~v~~~~~~~-~~~~l~s~---~~d~~v~iwd~ 210 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDG-----SNPRTLIGHRATVTDIAIID-RGRNVLSA---SLDGTIRLWEC 210 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CCCEEEECCSSCEEEEEEET-TTTEEEEE---ETTSCEEEEET
T ss_pred CccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-----cCceEEcCCCCcEEEEEEcC-CCCEEEEE---cCCCcEEEeEC
Confidence 89999999999999999999999999999986 35678899999999999999 99999997 48999999998
Q ss_pred CCCCCCceEEEEe---ecCcEEEEee
Q 000080 2352 LAPPTSSRASITC---HEGLYDLFLP 2374 (2389)
Q Consensus 2352 l~~tg~~v~sL~G---H~~~V~svA~ 2374 (2389)
.++++++.+.+ |...|.++++
T Consensus 211 --~~~~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 211 --GTGTTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp --TTTEEEEEECBTTBTTCCEEEEEE
T ss_pred --CCCceeEEeecCCCCCCCccEEEE
Confidence 46777888875 4455555554
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.77 E-value=1.9e-18 Score=200.73 Aligned_cols=170 Identities=12% Similarity=0.077 Sum_probs=131.1
Q ss_pred cceeeccccccccccccccC--CCC--cCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCC
Q 000080 2194 IGASALGWETQDDFEDYVDP--PAT--VENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPY 2269 (2389)
Q Consensus 2194 ~~Asg~~~d~~~~~~~~~d~--~at--v~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~G 2269 (2389)
++|+| +.+...++|+.... ... -+.-.|++++|+|++++|++|+.|++|++||+.+++++.++. +
T Consensus 111 ~l~~~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~----------~ 179 (420)
T 3vl1_A 111 RFILG-TTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI----------G 179 (420)
T ss_dssp EEEEE-ETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE----------C
T ss_pred EEEEE-ECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc----------C
Confidence 45555 55666666654311 111 122357999999999999999999999999999999988874 4
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeee---cCCCeeEEE---------------------
Q 000080 2270 ALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLC---FSSHAMDVS--------------------- 2325 (2389)
Q Consensus 2270 H~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~g---Hs~~V~sVA--------------------- 2325 (2389)
|...|++++|+|||+.||+|+.||+|++||++++ +++..+.+ |...|.+++
T Consensus 180 h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~ 254 (420)
T 3vl1_A 180 HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG-----TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLE 254 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT-----EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTC
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC-----ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceE
Confidence 6789999999999999999999999999999986 34445443 445555555
Q ss_pred EecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE-EeecCcEEEEeecccch-hhhccc
Q 000080 2326 YITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI-TCHEGLYDLFLPLKLLN-FALSKC 2385 (2389)
Q Consensus 2326 FSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL-~GH~~~V~svA~~~~~~-~~~s~~ 2385 (2389)
|+| +|++||++ +.|++|+|||+ .+++.+..+ .+|...|++++++|+|+ ++++-+
T Consensus 255 ~s~-~~~~l~~~---~~dg~i~i~d~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~ 310 (420)
T 3vl1_A 255 FGT-YGKYVIAG---HVSGVITVHNV--FSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY 310 (420)
T ss_dssp SSC-TTEEEEEE---ETTSCEEEEET--TTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE
T ss_pred EcC-CCCEEEEE---cCCCeEEEEEC--CCCceeEEcccccCCCceeEEEeCCCCCEEEEEe
Confidence 467 89999986 48999999998 456666655 55899999999999998 666543
No 54
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.77 E-value=1.7e-18 Score=227.85 Aligned_cols=167 Identities=9% Similarity=0.065 Sum_probs=132.0
Q ss_pred ccccceeeccccccccccccccCCC-C--------------cCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCc---
Q 000080 2191 YAGIGASALGWETQDDFEDYVDPPA-T--------------VENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDK--- 2252 (2389)
Q Consensus 2191 ~~~~~Asg~~~d~~~~~~~~~d~~a-t--------------v~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk--- 2252 (2389)
...++|+| ++|.+.|+|++..... + -+...|++|+|+|||++||+|+.|++|||||+.+++
T Consensus 446 dg~~laSg-s~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~ 524 (902)
T 2oaj_A 446 YGTAFITG-HSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYS 524 (902)
T ss_dssp EEEEEEEE-ETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--
T ss_pred cCcEEEEe-cCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccC
Confidence 44589999 9999999999864321 1 122468999999999999999999999999998763
Q ss_pred ------------------------------------------eeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe
Q 000080 2253 ------------------------------------------ATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA 2290 (2389)
Q Consensus 2253 ------------------------------------------~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS 2290 (2389)
++.++ .+|.+.|++|+||||| +||+|+
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l----------~~h~~~V~svafSpdG-~lAsgs 593 (902)
T 2oaj_A 525 VENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAV----------HANKGKTSAINNSNIG-FVGIAY 593 (902)
T ss_dssp -------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEE----------CCCSCSEEEEEECBTS-EEEEEE
T ss_pred ccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEE----------EcCCCcEEEEEecCCc-EEEEEe
Confidence 23444 2467999999999999 999999
Q ss_pred CCCcEEEeeCCCCCccCcc--cceeee-ecCCCeeEEEEe-----cCCC---CEEEEeecCCCCCeEEEeeCCC-CCCCc
Q 000080 2291 LDGTVCTWQLEVGGRSNVR--PMESCL-CFSSHAMDVSYI-----TSSG---SVIAAAGHSSNGINVVVWDTLA-PPTSS 2358 (2389)
Q Consensus 2291 ~DgTVkLWDl~tggrs~~k--~l~tl~-gHs~~V~sVAFS-----P~DG---slLASAG~sS~D~TVrLWD~l~-~tg~~ 2358 (2389)
.|++|+|||++++. .+. .+..+. +|+..|++|+|+ | || ++||+| +.|++|++||++. .+|++
T Consensus 594 ~D~tv~lwd~~~~~--~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~-Dg~~~~~l~sg---s~D~tv~~wd~~p~~~g~~ 667 (902)
T 2oaj_A 594 AAGSLMLIDRRGPA--IIYMENIREISGAQSACVTCIEFVIMEYGD-DGYSSILMVCG---TDMGEVITYKILPASGGKF 667 (902)
T ss_dssp TTSEEEEEETTTTE--EEEEEEGGGTCSSCCCCEEEEEEEEEECTT-SSSEEEEEEEE---ETTSEEEEEEEEECGGGCE
T ss_pred CCCcEEEEECCCCe--EEEEeehhHhccccccceEEEEEEEEecCC-CCCcceEEEEE---ecCCcEEEEEEecCCCCcE
Confidence 99999999998641 100 112343 899999999999 8 64 899997 5999999999732 36778
Q ss_pred eEEEEeec-----CcEEEEeec
Q 000080 2359 RASITCHE-----GLYDLFLPL 2375 (2389)
Q Consensus 2359 v~sL~GH~-----~~V~svA~~ 2375 (2389)
+..|.+|. +.|.++++.
T Consensus 668 ~~~~~~~~~~~~~~~v~~i~~~ 689 (902)
T 2oaj_A 668 DVQLMDITNVTSKGPIHKIDAF 689 (902)
T ss_dssp EEEEEEEEECCSSCCCCEEEEE
T ss_pred EEEecCceecCCCCceEEEEeE
Confidence 89999996 778888753
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.77 E-value=7e-18 Score=186.24 Aligned_cols=118 Identities=20% Similarity=0.249 Sum_probs=100.4
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCc----eeeEecccCCCCCCCCCCCCCEEEEEECC--CCCEEEEEeCCCc
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDK----ATATYGVLPAANVPPPYALASISALQFDH--YGHRFASAALDGT 2294 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk----~l~Tl~vl~gh~~p~~GH~~~V~sVaFSP--DG~~LASgS~DgT 2294 (2389)
.|.+++|+|+|++||+|+.||+|++||+.++. .+.++. +|...|++|+|+| ||++||+|+.||+
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR----------AHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE----------CCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceec----------cCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 46999999999999999999999999998774 444443 4678999999999 7999999999999
Q ss_pred EEEeeCCCCCc----cCcccceeeeecCCCeeEEEEecCC--CCEEEEeecCCCCCeEEEeeCC
Q 000080 2295 VCTWQLEVGGR----SNVRPMESCLCFSSHAMDVSYITSS--GSVIAAAGHSSNGINVVVWDTL 2352 (2389)
Q Consensus 2295 VkLWDl~tggr----s~~k~l~tl~gHs~~V~sVAFSP~D--GslLASAG~sS~D~TVrLWD~l 2352 (2389)
|++||++++.. ...+++..+.+|...|.+++|+| + |++||++ +.|++|+|||+.
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~---~~dg~v~iwd~~ 142 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACL---GNDGILRLYDAL 142 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEE---ETTCEEEEEECS
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEe---cCCCcEEEecCC
Confidence 99999987521 01134677889999999999999 7 9999997 489999999973
No 56
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.76 E-value=6.5e-18 Score=197.74 Aligned_cols=143 Identities=14% Similarity=0.181 Sum_probs=125.9
Q ss_pred eeEEEEEEcC-CCCeEEEEeCCCcEEEeecCCC-------ceeeEecccCCCCCCCCCCCCCEEEEEECCCC-CEEEEEe
Q 000080 2220 ISTRAFSSHP-LRPFFLVGSSNTHIYLWEFGKD-------KATATYGVLPAANVPPPYALASISALQFDHYG-HRFASAA 2290 (2389)
Q Consensus 2220 i~VrsVAFsP-dG~~LASGS~DgTIRLWDl~tG-------k~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG-~~LASgS 2290 (2389)
-.|.+++|+| ++++||+|+.||+|++||+.++ +++.++. +|...|++|+|+|+| +.|++|+
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~----------~h~~~v~~~~~~p~~~~~l~s~~ 151 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE----------GHTKRVGIVAWHPTAQNVLLSAG 151 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE----------CCSSCEEEEEECSSBTTEEEEEE
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec----------CCCCeEEEEEECcCCCCEEEEEc
Confidence 3579999999 9999999999999999999988 4555653 467899999999998 7999999
Q ss_pred CCCcEEEeeCCCCCccCcccceee--eecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE-EeecC
Q 000080 2291 LDGTVCTWQLEVGGRSNVRPMESC--LCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI-TCHEG 2367 (2389)
Q Consensus 2291 ~DgTVkLWDl~tggrs~~k~l~tl--~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL-~GH~~ 2367 (2389)
.||+|++||++++ ++..++ .+|...|.+++|+| +|++||++ +.|++|+|||+ .+++.++.+ .+|.+
T Consensus 152 ~dg~i~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~---~~d~~i~iwd~--~~~~~~~~~~~~~~~ 220 (402)
T 2aq5_A 152 CDNVILVWDVGTG-----AAVLTLGPDVHPDTIYSVDWSR-DGALICTS---CRDKRVRVIEP--RKGTVVAEKDRPHEG 220 (402)
T ss_dssp TTSCEEEEETTTT-----EEEEEECTTTCCSCEEEEEECT-TSSCEEEE---ETTSEEEEEET--TTTEEEEEEECSSCS
T ss_pred CCCEEEEEECCCC-----CccEEEecCCCCCceEEEEECC-CCCEEEEE---ecCCcEEEEeC--CCCceeeeeccCCCC
Confidence 9999999999986 466777 78999999999999 99999997 48999999998 466778888 79988
Q ss_pred c-EEEEeecccchhhhc
Q 000080 2368 L-YDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2368 ~-V~svA~~~~~~~~~s 2383 (2389)
. +.+++++++|+++.+
T Consensus 221 ~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 221 TRPVHAVFVSEGKILTT 237 (402)
T ss_dssp SSCCEEEECSTTEEEEE
T ss_pred CcceEEEEcCCCcEEEE
Confidence 7 899999999988765
No 57
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.76 E-value=3.3e-18 Score=202.31 Aligned_cols=182 Identities=10% Similarity=-0.008 Sum_probs=131.7
Q ss_pred ccccccceeeccccccccccccccCC-------CCcC--ceeEEEEEEcC--------CCCeEEEEeCCCcEEEeecCCC
Q 000080 2189 PGYAGIGASALGWETQDDFEDYVDPP-------ATVE--NISTRAFSSHP--------LRPFFLVGSSNTHIYLWEFGKD 2251 (2389)
Q Consensus 2189 ~g~~~~~Asg~~~d~~~~~~~~~d~~-------atv~--ni~VrsVAFsP--------dG~~LASGS~DgTIRLWDl~tG 2251 (2389)
+-...++|++ +.|.+.++|+..... .++. .-.|.+|+|+| ||++|||||.|++|||||+.++
T Consensus 98 ~~~~~~las~-~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 98 PVYSLFLACV-CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CEEEEEEEEE-ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred CCCCCEEEEE-eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 3344568888 899999999764221 1121 23579999998 8999999999999999999888
Q ss_pred ceeeEecccCCCCCCCCCCCCCEEEEEECCCC-CEEEEEeCCCcEEEeeCCCCCccC--------------------ccc
Q 000080 2252 KATATYGVLPAANVPPPYALASISALQFDHYG-HRFASAALDGTVCTWQLEVGGRSN--------------------VRP 2310 (2389)
Q Consensus 2252 k~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG-~~LASgS~DgTVkLWDl~tggrs~--------------------~k~ 2310 (2389)
.++.++. +|...|.+|+|+|+| ++||+|+.||+|++||++++.... ...
T Consensus 177 ~~~~~~~----------~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 177 GPILAGY----------PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EEEEEEE----------ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred ceeeeec----------CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 8766653 255889999999998 589999999999999998862100 000
Q ss_pred ceeeeecCCCeeEEEEecCCCCEEEEeec---------------------------------------------------
Q 000080 2311 MESCLCFSSHAMDVSYITSSGSVIAAAGH--------------------------------------------------- 2339 (2389)
Q Consensus 2311 l~tl~gHs~~V~sVAFSP~DGslLASAG~--------------------------------------------------- 2339 (2389)
.....+|...|.+++|+++||+.|++++.
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred eeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 11234677777778777446666554310
Q ss_pred --------CCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhc
Q 000080 2340 --------SSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2340 --------sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s 2383 (2389)
++.|++|+|||+ .+++++..+.+|...|++|+++|+|+...+
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~--~~~~~~~~~~~~~~~V~svafspdG~~LA~ 376 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINT--YEKDSNSIPIQLGMPIVDFCWHQDGSHLAI 376 (393)
T ss_dssp CTTEEEEEETTTTEEEEEET--TCTTCCEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCEEEEEECCCCEEEEEEC--CCCcEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 145677777776 456677788889999999999999998654
No 58
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.9e-17 Score=187.38 Aligned_cols=180 Identities=14% Similarity=0.121 Sum_probs=137.9
Q ss_pred cccceeeccccccccccccccCC----CCc--CceeEEEEEEcCC--CCeEEEEeCCCcEEEeecCCCceeeEecccCCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDPP----ATV--ENISTRAFSSHPL--RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAA 2263 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~----atv--~ni~VrsVAFsPd--G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh 2263 (2389)
...+|++ +.|...++|+..... ... +.-.|.+++|+|+ +++|++|+.|++|++||+.++....... +
T Consensus 69 ~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~--- 143 (379)
T 3jrp_A 69 GTILASC-SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII-I--- 143 (379)
T ss_dssp CSEEEEE-ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEE-E---
T ss_pred CCEEEEe-ccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEE-e---
Confidence 4566777 777788888764321 111 2246799999999 9999999999999999998885433322 1
Q ss_pred CCCCCCCCCCEEEEEECC-------------CCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCC
Q 000080 2264 NVPPPYALASISALQFDH-------------YGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSS 2330 (2389)
Q Consensus 2264 ~~p~~GH~~~V~sVaFSP-------------DG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~D 2330 (2389)
.+|...|++++|+| ||+.|++|+.||+|++||++++.. .......+.+|...|.+++|+| +
T Consensus 144 ----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~h~~~v~~~~~sp-~ 217 (379)
T 3jrp_A 144 ----DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ-TYVLESTLEGHSDWVRDVAWSP-T 217 (379)
T ss_dssp ----ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT-EEEEEEEECCCSSCEEEEEECC-C
T ss_pred ----cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc-ceeeEEEEecccCcEeEEEECC-C
Confidence 14568899999999 799999999999999999987631 1234567889999999999999 7
Q ss_pred ---CCEEEEeecCCCCCeEEEeeCCCCCCCceEE---EEeecCcEEEEeecccchhhhccc
Q 000080 2331 ---GSVIAAAGHSSNGINVVVWDTLAPPTSSRAS---ITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2331 ---GslLASAG~sS~D~TVrLWD~l~~tg~~v~s---L~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
|++||++ +.|++|+|||+.......... ...|...|++++++|+|++.++-+
T Consensus 218 ~~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 218 VLLRSYLASV---SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp CSSSEEEEEE---ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred CCCCCeEEEE---eCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 8999997 489999999984222122222 244999999999999999887643
No 59
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.76 E-value=2.3e-18 Score=214.89 Aligned_cols=177 Identities=9% Similarity=-0.023 Sum_probs=129.8
Q ss_pred cceeeccccccccccccccCCC------Cc--CceeEEEEEEcCC------CCeEEEEeCCCcEEEeecCCCceee--Ee
Q 000080 2194 IGASALGWETQDDFEDYVDPPA------TV--ENISTRAFSSHPL------RPFFLVGSSNTHIYLWEFGKDKATA--TY 2257 (2389)
Q Consensus 2194 ~~Asg~~~d~~~~~~~~~d~~a------tv--~ni~VrsVAFsPd------G~~LASGS~DgTIRLWDl~tGk~l~--Tl 2257 (2389)
+.|++ ++|.+.++|++..... ++ +...|++|+|+|+ +.+|||||.||+|||||+.++++.. .+
T Consensus 175 ~laS~-s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~ 253 (524)
T 2j04_B 175 MFDKE-KHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK 253 (524)
T ss_dssp --------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred hhccC-CCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce
Confidence 45777 8888899998743211 11 1235799999997 5799999999999999998775320 00
Q ss_pred cccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEE--EEecCCC-CEE
Q 000080 2258 GVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDV--SYITSSG-SVI 2334 (2389)
Q Consensus 2258 ~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sV--AFSP~DG-slL 2334 (2389)
.. ........||...|++|+|+|++ .||+|+.||+|+|||++++. .+...+.+|...|++| +|+| +| ++|
T Consensus 254 ~~-~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~----~~~~~~~~H~~~V~sv~~~~s~-~g~~~l 326 (524)
T 2j04_B 254 MC-EKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE----VPSFYDQVHDSYILSVSTAYSD-FEDTVV 326 (524)
T ss_dssp CC-CSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS----SCSEEEECSSSCEEEEEEECCT-TSCCEE
T ss_pred ee-cCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC----CceEEeecccccEEEEEEEcCC-CCCeEE
Confidence 00 00000013577899999999975 89999999999999999763 4667789999999999 5666 88 899
Q ss_pred EEeecCCCCCeEEEeeCCCCCCCceEEEEeecC--cEEEEeecccchhhhc
Q 000080 2335 AAAGHSSNGINVVVWDTLAPPTSSRASITCHEG--LYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2335 ASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~--~V~svA~~~~~~~~~s 2383 (2389)
||+ |.|++|||||+ .++++++.+.+|.. .|.+++++|+|...++
T Consensus 327 aS~---S~D~tvklWD~--~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s 372 (524)
T 2j04_B 327 STV---AVDGYFYIFNP--KDIATTKTTVSRFRGSNLVPVVYCPQIYSYIY 372 (524)
T ss_dssp EEE---ETTSEEEEECG--GGHHHHCEEEEECSCCSCCCEEEETTTTEEEE
T ss_pred EEe---ccCCeEEEEEC--CCCCcccccccccccCcccceEeCCCcCeEEE
Confidence 997 58999999998 45677889999975 4889999999877665
No 60
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.2e-17 Score=192.86 Aligned_cols=179 Identities=11% Similarity=0.144 Sum_probs=145.1
Q ss_pred ccceeeccccccccccccccCC--------CCc-----CceeEEEEEEcCC-CCeEEEEeCCCcEEEeecCCCceeeEec
Q 000080 2193 GIGASALGWETQDDFEDYVDPP--------ATV-----ENISTRAFSSHPL-RPFFLVGSSNTHIYLWEFGKDKATATYG 2258 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~--------atv-----~ni~VrsVAFsPd-G~~LASGS~DgTIRLWDl~tGk~l~Tl~ 2258 (2389)
.++|++ +.|...++|+..... ..+ +.-.|.+++|+|+ +.+|++|+.|++|++||+.+++++.++.
T Consensus 127 ~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 205 (416)
T 2pm9_A 127 NVLASG-GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS 205 (416)
T ss_dssp TBEEEE-CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC
T ss_pred CEEEEE-cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe
Confidence 355666 666777777664322 111 2236799999999 7899999999999999999999888875
Q ss_pred ccCCCCCCCCCCCCCEEEEEECCCC-CEEEEEeCCC---cEEEeeCCCCCccCcccceeee-ecCCCeeEEEEecCCCCE
Q 000080 2259 VLPAANVPPPYALASISALQFDHYG-HRFASAALDG---TVCTWQLEVGGRSNVRPMESCL-CFSSHAMDVSYITSSGSV 2333 (2389)
Q Consensus 2259 vl~gh~~p~~GH~~~V~sVaFSPDG-~~LASgS~Dg---TVkLWDl~tggrs~~k~l~tl~-gHs~~V~sVAFSP~DGsl 2333 (2389)
. |. +..+|...|++++|+|+| +.|++++.|+ +|++||++++. .+...+. +|...|.+++|+|.+|++
T Consensus 206 ~---~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~----~~~~~~~~~~~~~v~~~~~s~~~~~~ 277 (416)
T 2pm9_A 206 Y---TS-PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN----TPLQTLNQGHQKGILSLDWCHQDEHL 277 (416)
T ss_dssp C---CC-CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT----SCSBCCCSCCSSCEEEEEECSSCSSC
T ss_pred c---cc-cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC----CCcEEeecCccCceeEEEeCCCCCCe
Confidence 2 21 123557889999999998 7999999999 99999999863 4667777 899999999999978899
Q ss_pred EEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccc-hhhhccc
Q 000080 2334 IAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLL-NFALSKC 2385 (2389)
Q Consensus 2334 LASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~-~~~~s~~ 2385 (2389)
||++ +.|++|+|||+ .+++.+..+.+|.+.|++++++|+| +++++-+
T Consensus 278 l~s~---~~dg~v~~wd~--~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 278 LLSS---GRDNTVLLWNP--ESAEQLSQFPARGNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp EEEE---ESSSEEEEECS--SSCCEEEEEECSSSCCCCEEECTTCTTEEEECC
T ss_pred EEEE---eCCCCEEEeeC--CCCccceeecCCCCceEEEEECCCCCCEEEEEe
Confidence 9997 48999999998 5678899999999999999999999 6666543
No 61
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.76 E-value=3.8e-18 Score=196.41 Aligned_cols=143 Identities=11% Similarity=0.046 Sum_probs=114.3
Q ss_pred eEEEEEEcC--CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEe
Q 000080 2221 STRAFSSHP--LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTW 2298 (2389)
Q Consensus 2221 ~VrsVAFsP--dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLW 2298 (2389)
.|.+++|+| ++++|+|||.|++|++||+.+++++..+. . .|...|++++|+|||++||+|+.||+|++|
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~---~------~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS---A------KSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC---C------CSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe---c------CCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 479999999 99999999999999999999999876653 1 244579999999999999999999999999
Q ss_pred eCCCCCccCcccceeeee-cCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE---eecCcEE--EE
Q 000080 2299 QLEVGGRSNVRPMESCLC-FSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT---CHEGLYD--LF 2372 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~g-Hs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~---GH~~~V~--sv 2372 (2389)
|++++. ....++.+ |...|.+++|+| +|.+||+++ +| +|+|||+. +.+++++++ +|...+. ++
T Consensus 198 d~~~~~----~~~~~~~~~h~~~v~~l~fs~-~g~~l~s~~---~~-~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T 3lrv_A 198 NLSSPD----QASSRFPVDEEAKIKEVKFAD-NGYWMVVEC---DQ-TVVCFDLR--KDVGTLAYPTYTIPEFKTGTVTY 266 (343)
T ss_dssp ESSCTT----SCCEECCCCTTSCEEEEEECT-TSSEEEEEE---SS-BEEEEETT--SSTTCBSSCCCBC-----CCEEE
T ss_pred ECCCCC----CCccEEeccCCCCEEEEEEeC-CCCEEEEEe---CC-eEEEEEcC--CCCcceeecccccccccccceEE
Confidence 999863 22256777 999999999999 999999963 44 99999984 445544433 3555555 69
Q ss_pred eecccchhhhc
Q 000080 2373 LPLKLLNFALS 2383 (2389)
Q Consensus 2373 A~~~~~~~~~s 2383 (2389)
+++|+|++.++
T Consensus 267 ~~~~~g~~l~~ 277 (343)
T 3lrv_A 267 DIDDSGKNMIA 277 (343)
T ss_dssp EECTTSSEEEE
T ss_pred EECCCCCEEEE
Confidence 99999999876
No 62
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.76 E-value=5.7e-17 Score=185.34 Aligned_cols=174 Identities=11% Similarity=0.138 Sum_probs=137.4
Q ss_pred ccceeeccccccccccccccCCC--Cc-CceeEEEEEEcCCCC---eEEEEeCCCcEEEeecCCCceeeEecccCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPPA--TV-ENISTRAFSSHPLRP---FFLVGSSNTHIYLWEFGKDKATATYGVLPAANVP 2266 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~a--tv-~ni~VrsVAFsPdG~---~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p 2266 (2389)
.+.+++ +.+...++|+...... .. ..-.+.+++|+|.++ ++++|+.|++|++||+.+++.+.++.
T Consensus 113 ~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-------- 183 (408)
T 4a11_B 113 GMFTSS-SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ-------- 183 (408)
T ss_dssp TCEEEE-ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC--------
T ss_pred cEEEEE-eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec--------
Confidence 356666 6777777776632111 11 112468889999554 99999999999999999999888874
Q ss_pred CCCCCCCEEEEEECCCCC-EEEEEeCCCcEEEeeCCCCCccCcccceee---------------eecCCCeeEEEEecCC
Q 000080 2267 PPYALASISALQFDHYGH-RFASAALDGTVCTWQLEVGGRSNVRPMESC---------------LCFSSHAMDVSYITSS 2330 (2389)
Q Consensus 2267 ~~GH~~~V~sVaFSPDG~-~LASgS~DgTVkLWDl~tggrs~~k~l~tl---------------~gHs~~V~sVAFSP~D 2330 (2389)
+|...|++++|+|+|+ .||+|+.||+|++||++++. .++..+ .+|...|.+++|+| +
T Consensus 184 --~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 256 (408)
T 4a11_B 184 --GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS----GCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-D 256 (408)
T ss_dssp --CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS----CCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-T
T ss_pred --CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC----cccccccccccccceeeccccccccCceeEEEEcC-C
Confidence 3668899999999998 59999999999999998753 233333 67999999999999 9
Q ss_pred CCEEEEeecCCCCCeEEEeeCCC---------------------------------------------CCCCceEEEEee
Q 000080 2331 GSVIAAAGHSSNGINVVVWDTLA---------------------------------------------PPTSSRASITCH 2365 (2389)
Q Consensus 2331 GslLASAG~sS~D~TVrLWD~l~---------------------------------------------~tg~~v~sL~GH 2365 (2389)
|++||+++ .|++|++||+.. .+++.+..+.+|
T Consensus 257 ~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 333 (408)
T 4a11_B 257 GLHLLTVG---TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGH 333 (408)
T ss_dssp SSEEEEEE---TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCC
T ss_pred CCEEEEec---CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccC
Confidence 99999974 899999999732 233557888999
Q ss_pred cCcEEEEeecccchhhhccc
Q 000080 2366 EGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2366 ~~~V~svA~~~~~~~~~s~~ 2385 (2389)
.+.|++++++|+|++.++-+
T Consensus 334 ~~~v~~~~~s~~~~~l~s~~ 353 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELYSGS 353 (408)
T ss_dssp SSCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEEEcCCCCEEEEEC
Confidence 99999999999999887654
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.2e-17 Score=189.11 Aligned_cols=148 Identities=18% Similarity=0.110 Sum_probs=125.1
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecC--CCceeeEecccCCCCCCCCCCCCCEEEEEECCC--CCEEEEEeCCCcEE
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFG--KDKATATYGVLPAANVPPPYALASISALQFDHY--GHRFASAALDGTVC 2296 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~--tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD--G~~LASgS~DgTVk 2296 (2389)
.|++++|+|+|++||+|+.|++|++||+. +++.+.++. +|...|++|+|+|+ |+.||+|+.||+|+
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT----------GHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC----------CCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec----------CCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 46999999999999999999999999997 445566663 46789999999988 99999999999999
Q ss_pred EeeCCCCCccCcccceeeeecCCCeeEEEEecCC--CCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEee
Q 000080 2297 TWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSS--GSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLP 2374 (2389)
Q Consensus 2297 LWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~D--GslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~ 2374 (2389)
+||++++. ......+.+|...|.+++|+| + |++|+++ +.|++|++||+..........+.+|...|.++++
T Consensus 83 iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~---~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 83 IWKEENGR---WSQIAVHAVHSASVNSVQWAP-HEYGPLLLVA---SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp EEEEETTE---EEEEEEECCCSSCEEEEEECC-GGGCSEEEEE---ETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred EEEcCCCc---eeEeeeecCCCcceEEEEeCC-CCCCCEEEEe---cCCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 99999862 136777888999999999999 7 8999997 4899999999853322346788999999999999
Q ss_pred cc-------------cchhhhccc
Q 000080 2375 LK-------------LLNFALSKC 2385 (2389)
Q Consensus 2375 ~~-------------~~~~~~s~~ 2385 (2389)
+| +++++++-+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~ 179 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGG 179 (379)
T ss_dssp CCCC----------CTTCEEEEEE
T ss_pred cCccccccccccCCCCCCEEEEEe
Confidence 99 577776543
No 64
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.75 E-value=1.7e-17 Score=191.81 Aligned_cols=173 Identities=13% Similarity=0.034 Sum_probs=139.1
Q ss_pred ccceeeccccccccccccccCCCC--c----CceeEEEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPPAT--V----ENISTRAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANV 2265 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~at--v----~ni~VrsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~ 2265 (2389)
.++|+| +.|...++|+....... . +.-.|.+++|+| ++++|++|+.|++|++||+. ++.+.++. .+
T Consensus 87 ~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~---~~-- 159 (383)
T 3ei3_B 87 TTVAVG-SKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS-GSVIQVFA---KT-- 159 (383)
T ss_dssp TEEEEE-EBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT-SCEEEEEE---CC--
T ss_pred CEEEEE-cCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC-CCceEEEe---cc--
Confidence 467777 77778888877422111 1 234679999999 78999999999999999997 46666664 22
Q ss_pred CCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCC-EEEEeecCCCCC
Q 000080 2266 PPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGS-VIAAAGHSSNGI 2344 (2389)
Q Consensus 2266 p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGs-lLASAG~sS~D~ 2344 (2389)
.+|...|++++|+|+|+.||+|+.||+|++||++ + +++.++.+|...|.+++|+| +|+ +||++ +.|+
T Consensus 160 --~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~-----~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~---~~d~ 227 (383)
T 3ei3_B 160 --DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-G-----HEIFKEKLHKAKVTHAEFNP-RCDWLMATS---SVDA 227 (383)
T ss_dssp --CCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-S-----CEEEEEECSSSCEEEEEECS-SCTTEEEEE---ETTS
T ss_pred --CCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-C-----CEEEEeccCCCcEEEEEECC-CCCCEEEEE---eCCC
Confidence 2466889999999999999999999999999995 3 46788899999999999999 888 89987 4899
Q ss_pred eEEEeeCCCCC--CCceEEEEeecCcEEEEeecc-cchhhhccc
Q 000080 2345 NVVVWDTLAPP--TSSRASITCHEGLYDLFLPLK-LLNFALSKC 2385 (2389)
Q Consensus 2345 TVrLWD~l~~t--g~~v~sL~GH~~~V~svA~~~-~~~~~~s~~ 2385 (2389)
+|+|||+.... +.++..+ +|.+.|++++++| +|+++++-+
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 228 TVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp EEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEE
T ss_pred EEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEc
Confidence 99999984211 4456666 7999999999999 999888754
No 65
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.75 E-value=9.9e-17 Score=179.76 Aligned_cols=173 Identities=10% Similarity=0.058 Sum_probs=133.2
Q ss_pred ccccccceeeccccccccccccccCCC-----CcCceeEEEEEEcCCC--CeEEEEeCCCcEEEeecCCCceeeEecccC
Q 000080 2189 PGYAGIGASALGWETQDDFEDYVDPPA-----TVENISTRAFSSHPLR--PFFLVGSSNTHIYLWEFGKDKATATYGVLP 2261 (2389)
Q Consensus 2189 ~g~~~~~Asg~~~d~~~~~~~~~d~~a-----tv~ni~VrsVAFsPdG--~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~ 2261 (2389)
.......+++ +.|...++|+...... .-+.-.|..++|++++ .++++|+.|++|++||+.+++++.++.
T Consensus 137 ~~~~~~l~s~-s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~--- 212 (340)
T 4aow_A 137 SSDNRQIVSG-SRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI--- 212 (340)
T ss_dssp CTTSSCEEEE-ETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC---
T ss_pred eecCccceee-cCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec---
Confidence 3445567777 7777777776531111 0112346888999875 478999999999999999999988873
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCC
Q 000080 2262 AANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSS 2341 (2389)
Q Consensus 2262 gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS 2341 (2389)
+|.+.|++|+|+|||++||+|+.||+|++||++++ +++..+.+| ..|..++|+| ++.+++++
T Consensus 213 -------~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~-----~~~~~~~~~-~~v~~~~~~~-~~~~~~~~---- 274 (340)
T 4aow_A 213 -------GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG-----KHLYTLDGG-DIINALCFSP-NRYWLCAA---- 274 (340)
T ss_dssp -------CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT-----EEEEEEECS-SCEEEEEECS-SSSEEEEE----
T ss_pred -------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC-----ceeeeecCC-ceEEeeecCC-CCceeecc----
Confidence 46789999999999999999999999999999975 456666544 6799999999 87777653
Q ss_pred CCCeEEEeeCCCCCCCceEE---------EEeecCcEEEEeecccchhhhccc
Q 000080 2342 NGINVVVWDTLAPPTSSRAS---------ITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2342 ~D~TVrLWD~l~~tg~~v~s---------L~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
.|++|+|||+ .++..+.. ..+|...|++++++|+|++.++-+
T Consensus 275 ~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 275 TGPSIKIWDL--EGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp ETTEEEEEET--TTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEEC--CCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 6899999997 33333433 457999999999999999988744
No 66
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=3.2e-18 Score=197.00 Aligned_cols=173 Identities=12% Similarity=0.000 Sum_probs=135.6
Q ss_pred ccccccceeeccccccccccccccCC--CCcCceeEEEEEEcCCCCeEEEEeCCCcEEEeecC---------CCceeeEe
Q 000080 2189 PGYAGIGASALGWETQDDFEDYVDPP--ATVENISTRAFSSHPLRPFFLVGSSNTHIYLWEFG---------KDKATATY 2257 (2389)
Q Consensus 2189 ~g~~~~~Asg~~~d~~~~~~~~~d~~--atv~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~---------tGk~l~Tl 2257 (2389)
.....+.|+| +.|.+.++|+..+.. .++..-.|++++|||+ ++|||.|++|++|+.. +++.++.+
T Consensus 45 ~~d~~~l~sg-~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~ 120 (343)
T 3lrv_A 45 YYDKWVCMCR-CEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREI 120 (343)
T ss_dssp SEEEEEEEEE-EETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred cCCCCEEEEE-CCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEe
Confidence 3455678888 899999999875321 1121224567789998 9999999999999765 44444444
Q ss_pred cccCCCCCCCCCCCCCEEEEEECC--CCCEEEEEeCCCcEEEeeCCCCCccCcccceee-eecCCCeeEEEEecCCCCEE
Q 000080 2258 GVLPAANVPPPYALASISALQFDH--YGHRFASAALDGTVCTWQLEVGGRSNVRPMESC-LCFSSHAMDVSYITSSGSVI 2334 (2389)
Q Consensus 2258 ~vl~gh~~p~~GH~~~V~sVaFSP--DG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl-~gHs~~V~sVAFSP~DGslL 2334 (2389)
. .+|.+.|.+++|+| +|++||+|+.||+|++||++++. ++... ..|...|.+++|+| ||.+|
T Consensus 121 ~---------~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~-----~~~~~~~~~~~~i~~~~~~p-dg~~l 185 (343)
T 3lrv_A 121 E---------VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS-----QYIVHSAKSDVEYSSGVLHK-DSLLL 185 (343)
T ss_dssp E---------CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC-----EEEEECCCSSCCCCEEEECT-TSCEE
T ss_pred e---------cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc-----EEEEEecCCCCceEEEEECC-CCCEE
Confidence 2 24668899999999 99999999999999999999862 34333 33556899999999 99999
Q ss_pred EEeecCCCCCeEEEeeCCCCCCCce-EEEEe-ecCcEEEEeecccchhhhccc
Q 000080 2335 AAAGHSSNGINVVVWDTLAPPTSSR-ASITC-HEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2335 ASAG~sS~D~TVrLWD~l~~tg~~v-~sL~G-H~~~V~svA~~~~~~~~~s~~ 2385 (2389)
|+| +.|++|+|||+ .+++.+ ..+.+ |.+.|++++++|+|++.++-+
T Consensus 186 asg---~~dg~i~iwd~--~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 186 ALY---SPDGILDVYNL--SSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp EEE---CTTSCEEEEES--SCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE
T ss_pred EEE---cCCCEEEEEEC--CCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe
Confidence 996 58999999998 466666 88998 999999999999999887754
No 67
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.75 E-value=1.6e-17 Score=187.06 Aligned_cols=178 Identities=13% Similarity=0.124 Sum_probs=133.8
Q ss_pred cceeeccccccccccccccC--CCCc--CceeEEEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCC
Q 000080 2194 IGASALGWETQDDFEDYVDP--PATV--ENISTRAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPP 2268 (2389)
Q Consensus 2194 ~~Asg~~~d~~~~~~~~~d~--~atv--~ni~VrsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~ 2268 (2389)
++|+| +.|...++|+.... ..++ +.-.|.+++|+| ++++|++|+.|++|++||+.+++.+..+..+ .
T Consensus 87 ~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------~ 158 (366)
T 3k26_A 87 LLAVA-GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV-------E 158 (366)
T ss_dssp EEEEE-ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECST-------T
T ss_pred EEEEe-cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccc-------c
Confidence 45555 55556666654311 1111 123579999999 9999999999999999999999988887422 2
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCcc-----------------------CcccceeeeecCCCeeEEE
Q 000080 2269 YALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRS-----------------------NVRPMESCLCFSSHAMDVS 2325 (2389)
Q Consensus 2269 GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs-----------------------~~k~l~tl~gHs~~V~sVA 2325 (2389)
+|...|++++|+|+|+.|++|+.||+|++||++++... ....+....+|...|.+++
T Consensus 159 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 159 GHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred cccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 46789999999999999999999999999999875200 0001223334999999999
Q ss_pred EecCCCCEEEEeecCCCCCeEEEeeCCCCCC------------CceEEEEeecCcEEEEeeccc--chhhhccc
Q 000080 2326 YITSSGSVIAAAGHSSNGINVVVWDTLAPPT------------SSRASITCHEGLYDLFLPLKL--LNFALSKC 2385 (2389)
Q Consensus 2326 FSP~DGslLASAG~sS~D~TVrLWD~l~~tg------------~~v~sL~GH~~~V~svA~~~~--~~~~~s~~ 2385 (2389)
|+ |++|+++ +.|++|++||+..... ..+..+.+|...|++++++|+ |++.++-+
T Consensus 239 ~~---~~~l~~~---~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~ 306 (366)
T 3k26_A 239 WL---GDLILSK---SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN 306 (366)
T ss_dssp EE---TTEEEEE---CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC
T ss_pred Ec---CCEEEEE---ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe
Confidence 99 4789986 5899999999732111 237889999999999999999 99887654
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.75 E-value=3.3e-17 Score=187.84 Aligned_cols=143 Identities=15% Similarity=0.084 Sum_probs=127.4
Q ss_pred eeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
-.|.+++|+|++++|++|+.|++|++||+.+++.+.++. +|...|.+++|+|+| .|++++.||+|++||
T Consensus 248 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----------~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d 316 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFY----------GHSQSIVSASWVGDD-KVISCSMDGSVRLWS 316 (425)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEEC----------CCSSCEEEEEEETTT-EEEEEETTSEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEec----------CCCccEEEEEECCCC-EEEEEeCCCcEEEEE
Confidence 357999999999999999999999999999998888773 356889999999999 999999999999999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCC--------------------ce
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTS--------------------SR 2359 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~--------------------~v 2359 (2389)
++++ +++..+.+|...|.+++|+| +|++||++ +.|++|+|||+ .+++ .+
T Consensus 317 ~~~~-----~~~~~~~~~~~~i~~~~~s~-~~~~l~~~---~~dg~i~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (425)
T 1r5m_A 317 LKQN-----TLLALSIVDGVPIFAGRISQ-DGQKYAVA---FMDGQVNVYDL--KKLNSKSRSLYGNRDGILNPLPIPLY 385 (425)
T ss_dssp TTTT-----EEEEEEECTTCCEEEEEECT-TSSEEEEE---ETTSCEEEEEC--HHHHC--------------CEECCEE
T ss_pred CCCC-----cEeEecccCCccEEEEEEcC-CCCEEEEE---ECCCeEEEEEC--CCCccceeeeecccccccCcccchhh
Confidence 9986 46778889999999999999 99999997 48999999998 3444 68
Q ss_pred EEEEeecC--cEEEEeecccchhhhcc
Q 000080 2360 ASITCHEG--LYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2360 ~sL~GH~~--~V~svA~~~~~~~~~s~ 2384 (2389)
..+.+|.. .|++++++|+|++.++-
T Consensus 386 ~~~~~~~~~~~v~~~~~s~~~~~l~~~ 412 (425)
T 1r5m_A 386 ASYQSSQDNDYIFDLSWNCAGNKISVA 412 (425)
T ss_dssp EEECCTTCCCCEEEEEECTTSSEEEEE
T ss_pred hhhcCcccCCceEEEEccCCCceEEEE
Confidence 99999987 99999999999987654
No 69
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.75 E-value=2.2e-17 Score=185.75 Aligned_cols=170 Identities=12% Similarity=0.086 Sum_probs=134.4
Q ss_pred cccceeeccccccccccccccCC---CCcC------ceeEEEEE----EcCCCCeEEEEeCCCcEEEeecCCCceeeEec
Q 000080 2192 AGIGASALGWETQDDFEDYVDPP---ATVE------NISTRAFS----SHPLRPFFLVGSSNTHIYLWEFGKDKATATYG 2258 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~---atv~------ni~VrsVA----FsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~ 2258 (2389)
....|++ +.|...++|+..... .++. ...|++++ |+|++++|++|+.|++|++||+.+++.+...
T Consensus 129 ~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~- 206 (357)
T 3i2n_A 129 APEIVTG-SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET- 206 (357)
T ss_dssp CCEEEEE-ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE-
T ss_pred ccEEEEE-eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec-
Confidence 3456666 677777777765322 1111 12578888 7899999999999999999999998875543
Q ss_pred ccCCCCCCCCCCCCCEEEEEECC---CCCEEEEEeCCCcEEEeeCCCCCccCccccee-----eeecCCCeeEEEEecCC
Q 000080 2259 VLPAANVPPPYALASISALQFDH---YGHRFASAALDGTVCTWQLEVGGRSNVRPMES-----CLCFSSHAMDVSYITSS 2330 (2389)
Q Consensus 2259 vl~gh~~p~~GH~~~V~sVaFSP---DG~~LASgS~DgTVkLWDl~tggrs~~k~l~t-----l~gHs~~V~sVAFSP~D 2330 (2389)
+|...|++++|+| +|+.|++|+.||+|++||++++ ++... +.+|...|.+++|+| +
T Consensus 207 ----------~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~-~ 270 (357)
T 3i2n_A 207 ----------NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ-----HPTKGFASVSEKAHKSTVWQVRHLP-Q 270 (357)
T ss_dssp ----------ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE-----ETTTEEEEEEEECCSSCEEEEEEET-T
T ss_pred ----------CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC-----CcccceeeeccCCCcCCEEEEEECC-C
Confidence 2457899999999 9999999999999999999875 23333 348999999999999 8
Q ss_pred CC-EEEEeecCCCCCeEEEeeCCCCCC-----------------CceEEEEeecCcEEEEeecccchhhh
Q 000080 2331 GS-VIAAAGHSSNGINVVVWDTLAPPT-----------------SSRASITCHEGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2331 Gs-lLASAG~sS~D~TVrLWD~l~~tg-----------------~~v~sL~GH~~~V~svA~~~~~~~~~ 2382 (2389)
|+ +||++ +.|++|+|||+..... +++..+.+|.+.|++++++|+|++.+
T Consensus 271 ~~~~l~~~---~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 337 (357)
T 3i2n_A 271 NRELFLTA---GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLC 337 (357)
T ss_dssp EEEEEEEE---ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEE
T ss_pred CCcEEEEE---eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEE
Confidence 88 88886 4899999999842111 35788999999999999999999887
No 70
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.75 E-value=5.8e-17 Score=189.72 Aligned_cols=175 Identities=11% Similarity=0.045 Sum_probs=137.8
Q ss_pred cceeeccccccccccccccC--CCCc----CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCC
Q 000080 2194 IGASALGWETQDDFEDYVDP--PATV----ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPP 2267 (2389)
Q Consensus 2194 ~~Asg~~~d~~~~~~~~~d~--~atv----~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~ 2267 (2389)
++|++ +.|...++|+.... ..++ +.-.|.+++|+|+|++|++|+.|++|++||+++++.+.++. .+
T Consensus 146 ~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~----- 217 (402)
T 2aq5_A 146 VLLSA-GCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKD--RP----- 217 (402)
T ss_dssp EEEEE-ETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE--CS-----
T ss_pred EEEEE-cCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeec--cC-----
Confidence 56666 66777777765421 1122 23457999999999999999999999999999999888873 12
Q ss_pred CCCCC-CEEEEEECCCCCEEEEE---eCCCcEEEeeCCCCCccCcccceee-eecCCCeeEEEEecCCCCEEEEeecCCC
Q 000080 2268 PYALA-SISALQFDHYGHRFASA---ALDGTVCTWQLEVGGRSNVRPMESC-LCFSSHAMDVSYITSSGSVIAAAGHSSN 2342 (2389)
Q Consensus 2268 ~GH~~-~V~sVaFSPDG~~LASg---S~DgTVkLWDl~tggrs~~k~l~tl-~gHs~~V~sVAFSP~DGslLASAG~sS~ 2342 (2389)
|.+ .+.+++|+|||+.|++| +.|++|++||++++. .++... ..|...+.+++|+| +|++|+++| +.
T Consensus 218 --~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~g--~~ 288 (402)
T 2aq5_A 218 --HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE----EPLSLQELDTSSGVLLPFFDP-DTNIVYLCG--KG 288 (402)
T ss_dssp --SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS----SCSEEEECCCCSSCEEEEEET-TTTEEEEEE--TT
T ss_pred --CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc----CCceEEeccCCCceeEEEEcC-CCCEEEEEE--cC
Confidence 334 48999999999999999 899999999999863 233332 25778899999999 899998665 57
Q ss_pred CCeEEEeeCCCCCCCc-eEEEEeec--CcEEEEeecccchhhhccccc
Q 000080 2343 GINVVVWDTLAPPTSS-RASITCHE--GLYDLFLPLKLLNFALSKCRC 2387 (2389)
Q Consensus 2343 D~TVrLWD~l~~tg~~-v~sL~GH~--~~V~svA~~~~~~~~~s~~~~ 2387 (2389)
|++|++||+. +++. ++.+..|. +.|.+++++|+|.++++.|..
T Consensus 289 dg~i~i~d~~--~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~ 334 (402)
T 2aq5_A 289 DSSIRYFEIT--SEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEI 334 (402)
T ss_dssp CSCEEEEEEC--SSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEE
T ss_pred CCeEEEEEec--CCCcceEeecccccCCcccceEEecccccceeccee
Confidence 9999999983 4443 77777765 999999999999999988763
No 71
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.75 E-value=3.5e-17 Score=184.00 Aligned_cols=150 Identities=13% Similarity=0.149 Sum_probs=119.3
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.|.+++|+|+|++||+|+.|++|++||+.+++.+.++. +|...|++++|+|||++||+++.||+|++||+
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD----------GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC----------CCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh----------hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 45999999999999999999999999999999988874 46789999999999999999999999999999
Q ss_pred CCCCccC----------------------------------------------------cccceeeeecCC--CeeEEEE
Q 000080 2301 EVGGRSN----------------------------------------------------VRPMESCLCFSS--HAMDVSY 2326 (2389)
Q Consensus 2301 ~tggrs~----------------------------------------------------~k~l~tl~gHs~--~V~sVAF 2326 (2389)
+++.... ..+...+.+|.. .+.+++|
T Consensus 104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 104 SNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 8762100 001112222333 6677777
Q ss_pred ecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2327 ITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2327 SP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+| +|++||++ +.|++|++||+. ...+.+..+.+|.+.|.+++++|+|+++++-+
T Consensus 184 ~~-~~~~l~~~---~~dg~i~i~d~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 237 (369)
T 3zwl_B 184 ST-KGKYIIAG---HKDGKISKYDVS-NNYEYVDSIDLHEKSISDMQFSPDLTYFITSS 237 (369)
T ss_dssp CG-GGCEEEEE---ETTSEEEEEETT-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred cC-CCCEEEEE---cCCCEEEEEECC-CCcEeEEEEecCCCceeEEEECCCCCEEEEec
Confidence 77 77777775 478999999973 12566889999999999999999999887654
No 72
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.74 E-value=1.5e-17 Score=188.63 Aligned_cols=178 Identities=8% Similarity=0.003 Sum_probs=139.1
Q ss_pred ccceeeccccccccccccccC----CCCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDP----PATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVP 2266 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~----~atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p 2266 (2389)
.+.|.+ +.+...++|+.... ..++ +.-.|.+++|+|+|++|++|+.|++|++||+.+++....+..
T Consensus 21 ~~l~~~-~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~------- 92 (372)
T 1k8k_C 21 TQIAIC-PNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI------- 92 (372)
T ss_dssp SEEEEE-CSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEEC-------
T ss_pred CEEEEE-eCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEe-------
Confidence 345555 55666666655322 1222 123579999999999999999999999999998886665531
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccc-eeeeecCCCeeEEEEecCCCCEEEEeecCCCCCe
Q 000080 2267 PPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPM-ESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGIN 2345 (2389)
Q Consensus 2267 ~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l-~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~T 2345 (2389)
.+|...|++++|+|+|++||+|+.||+|++||++++. ..... ....+|...|.+++|+| +|++||++ +.|++
T Consensus 93 -~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~--~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~---~~dg~ 165 (372)
T 1k8k_C 93 -LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN--DWWVCKHIKKPIRSTVLSLDWHP-NSVLLAAG---SCDFK 165 (372)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTT--TEEEEEEECTTCCSCEEEEEECT-TSSEEEEE---ETTSC
T ss_pred -ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCC--cceeeeeeecccCCCeeEEEEcC-CCCEEEEE---cCCCC
Confidence 2466889999999999999999999999999999762 11112 22367899999999999 99999997 48999
Q ss_pred EEEeeCC----------------CCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2346 VVVWDTL----------------APPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2346 VrLWD~l----------------~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
|++||+. .+.++++..+.+|.+.|.+++++|+|+++++-+
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 221 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS 221 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe
Confidence 9999963 245677899999999999999999999887654
No 73
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.74 E-value=4.3e-17 Score=205.64 Aligned_cols=174 Identities=9% Similarity=0.034 Sum_probs=132.8
Q ss_pred cccccceeeccccccccccccc------cCCCCcCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCce-------eeE
Q 000080 2190 GYAGIGASALGWETQDDFEDYV------DPPATVENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKA-------TAT 2256 (2389)
Q Consensus 2190 g~~~~~Asg~~~d~~~~~~~~~------d~~atv~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~-------l~T 2256 (2389)
..+.++|++ +.+.+.++|+.. ++...+..-.|++++|||||++||+|++||+|+|||+.+++. +.+
T Consensus 95 PdG~~LAs~-s~dg~V~iwd~~~~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~t 173 (588)
T 2j04_A 95 PIDDWMAVL-SNNGNVSVFKDNKMLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESS 173 (588)
T ss_dssp SSSSCEEEE-ETTSCEEEEETTEEEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEE
T ss_pred CCCCEEEEE-eCCCcEEEEeCCceeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeee
Confidence 355667777 778888888621 122222222479999999999999999999999999988753 566
Q ss_pred ecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceee-eecCCCeeEEEEecCCCCEEE
Q 000080 2257 YGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESC-LCFSSHAMDVSYITSSGSVIA 2335 (2389)
Q Consensus 2257 l~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl-~gHs~~V~sVAFSP~DGslLA 2335 (2389)
+. .| ..||.++|.+|+||||| +|+++.|++|++||+..+. ......++ .+|...|.+|+|+ |+.||
T Consensus 174 i~---~~---~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~--~~~~~~tL~~~h~~~V~svaFs---g~~LA 240 (588)
T 2j04_A 174 IR---LS---DAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASS--HQPVSRMIQNASRRKITDLKIV---DYKVV 240 (588)
T ss_dssp EE---CS---CTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSS--SCCCEEEEECCCSSCCCCEEEE---TTEEE
T ss_pred ee---cc---cccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCc--cccceeeecccccCcEEEEEEE---CCEEE
Confidence 53 33 25788999999999999 9999999999999998752 11123456 4788999999999 48999
Q ss_pred EeecCCCCCeEEEeeCCCCCCCceEEEE-eecCcEEEEee--cccchhhhcc
Q 000080 2336 AAGHSSNGINVVVWDTLAPPTSSRASIT-CHEGLYDLFLP--LKLLNFALSK 2384 (2389)
Q Consensus 2336 SAG~sS~D~TVrLWD~l~~tg~~v~sL~-GH~~~V~svA~--~~~~~~~~s~ 2384 (2389)
+++ |++|+|||+ .++....+. ||.+.|+.+++ +|+|..+++-
T Consensus 241 Sa~----~~tIkLWd~---~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a 285 (588)
T 2j04_A 241 LTC----PGYVHKIDL---KNYSISSLKTGSLENFHIIPLNHEKESTILLMS 285 (588)
T ss_dssp EEC----SSEEEEEET---TTTEEEEEECSCCSCCCEEEETTCSSCEEEEEC
T ss_pred EEe----CCeEEEEEC---CCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEE
Confidence 862 689999997 234443444 99999999999 9999776654
No 74
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.74 E-value=2.2e-17 Score=189.99 Aligned_cols=140 Identities=18% Similarity=0.154 Sum_probs=124.6
Q ss_pred eeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCC---CCCEEEEEECCCCCEEEEEeCC---C
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYA---LASISALQFDHYGHRFASAALD---G 2293 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH---~~~V~sVaFSPDG~~LASgS~D---g 2293 (2389)
..|.+++|+|++ +|++|+.|++|++||+.+++.+.++... .+| ...|++++|+|+|+.||+|+.| |
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g 258 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQ-------HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFG 258 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECC-------C---CCCCCEEEEEECSSTTEEEEEEEETTEE
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecc-------ccccccCCccceEEECCCCCEEEEEecCCCCc
Confidence 456899999999 9999999999999999999988887521 125 6889999999999999999999 9
Q ss_pred cEEEeeCCCCCccCcccceeeee-------------cCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceE
Q 000080 2294 TVCTWQLEVGGRSNVRPMESCLC-------------FSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRA 2360 (2389)
Q Consensus 2294 TVkLWDl~tggrs~~k~l~tl~g-------------Hs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~ 2360 (2389)
+|++||++++ +++..+.+ |...|.+++|+| +|++||++ +.|++|+|||+ .+++++.
T Consensus 259 ~i~i~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~---~~dg~i~iwd~--~~~~~~~ 327 (397)
T 1sq9_A 259 CITLYETEFG-----ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSA---GWDGKLRFWDV--KTKERIT 327 (397)
T ss_dssp EEEEEETTTC-----CEEEEECBC--------CCBSBSSCEEEEEECS-SSSEEEEE---ETTSEEEEEET--TTTEEEE
T ss_pred eEEEEECCCC-----cccceeccCcccccccccccccCCcEEEEEECC-CCCEEEEE---eCCCeEEEEEc--CCCceeE
Confidence 9999999986 46777888 999999999999 99999997 48999999998 5678899
Q ss_pred EEE------ee---------------cCcEEEEeecccc
Q 000080 2361 SIT------CH---------------EGLYDLFLPLKLL 2378 (2389)
Q Consensus 2361 sL~------GH---------------~~~V~svA~~~~~ 2378 (2389)
.+. +| ...|++++++|+|
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 328 TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred EEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 999 88 9999999999999
No 75
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.74 E-value=3.6e-17 Score=185.60 Aligned_cols=175 Identities=13% Similarity=0.037 Sum_probs=137.0
Q ss_pred cceeeccccccccccccccCC----C--CcCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCce---eeEecccCCCC
Q 000080 2194 IGASALGWETQDDFEDYVDPP----A--TVENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKA---TATYGVLPAAN 2264 (2389)
Q Consensus 2194 ~~Asg~~~d~~~~~~~~~d~~----a--tv~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~---l~Tl~vl~gh~ 2264 (2389)
..|++ +.|...++|+..... . .-..-.|.+++|+|++++|++|+.|++|++||+.+++. ...+.
T Consensus 66 ~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~------ 138 (372)
T 1k8k_C 66 RIVTC-GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIK------ 138 (372)
T ss_dssp EEEEE-ETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEEC------
T ss_pred EEEEE-cCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeee------
Confidence 45555 556666666653221 0 11123569999999999999999999999999988763 23331
Q ss_pred CCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCC-------------ccCcccceeeeecCCCeeEEEEecCCC
Q 000080 2265 VPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGG-------------RSNVRPMESCLCFSSHAMDVSYITSSG 2331 (2389)
Q Consensus 2265 ~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tgg-------------rs~~k~l~tl~gHs~~V~sVAFSP~DG 2331 (2389)
.+|...|++++|+|+|+.|++|+.||+|++||++... ....+++..+.+|...|.+++|+| +|
T Consensus 139 ---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 214 (372)
T 1k8k_C 139 ---KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NG 214 (372)
T ss_dssp ---TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SS
T ss_pred ---cccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CC
Confidence 2467889999999999999999999999999975210 001146677889999999999999 99
Q ss_pred CEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhcc
Q 000080 2332 SVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2332 slLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
++||++ +.|++|++||+ .+++++..+.+|...|.+++++|+|+++.+-
T Consensus 215 ~~l~~~---~~d~~i~i~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 215 SRVAWV---SHDSTVCLADA--DKKMAVATLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp SEEEEE---ETTTEEEEEEG--GGTTEEEEEECSSCCEEEEEEEETTEEEEEE
T ss_pred CEEEEE---eCCCEEEEEEC--CCCceeEEEccCCCCeEEEEEecCCCEEEEE
Confidence 999997 48999999998 4678899999999999999999999876543
No 76
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.74 E-value=2e-17 Score=191.08 Aligned_cols=145 Identities=11% Similarity=0.112 Sum_probs=124.3
Q ss_pred eEEEEEEcCCC-CeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECC-CCCEEEEEeCCCcEEEe
Q 000080 2221 STRAFSSHPLR-PFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDH-YGHRFASAALDGTVCTW 2298 (2389)
Q Consensus 2221 ~VrsVAFsPdG-~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSP-DG~~LASgS~DgTVkLW 2298 (2389)
.|.+++|+|+| ++||+|+.|++|++||+.+++....+.. .+|...|++++|+| +|+.|++|+.|++|++|
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG--------MGPGDAITGMKFNQFNTNQLFVSSIRGATTLR 146 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC--------CSTTCBEEEEEEETTEEEEEEEEETTTEEEEE
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec--------CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEE
Confidence 56999999999 8999999999999999998887776631 25779999999999 78999999999999999
Q ss_pred eCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccc
Q 000080 2299 QLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~ 2378 (2389)
|++.. ..+.+....+|...|.+++|+| +|++||++ +.|++|++||+ .++.+..+.+|.+.|.+++++|++
T Consensus 147 d~~~~---~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~---~~d~~i~i~d~---~~~~~~~~~~h~~~v~~~~~~~~~ 216 (383)
T 3ei3_B 147 DFSGS---VIQVFAKTDSWDYWYCCVDVSV-SRQMLATG---DSTGRLLLLGL---DGHEIFKEKLHKAKVTHAEFNPRC 216 (383)
T ss_dssp ETTSC---EEEEEECCCCSSCCEEEEEEET-TTTEEEEE---ETTSEEEEEET---TSCEEEEEECSSSCEEEEEECSSC
T ss_pred ECCCC---ceEEEeccCCCCCCeEEEEECC-CCCEEEEE---CCCCCEEEEEC---CCCEEEEeccCCCcEEEEEECCCC
Confidence 99853 2233344445668899999999 99999997 48999999997 477899999999999999999999
Q ss_pred h-hhhc
Q 000080 2379 N-FALS 2383 (2389)
Q Consensus 2379 ~-~~~s 2383 (2389)
+ .+++
T Consensus 217 ~~~l~s 222 (383)
T 3ei3_B 217 DWLMAT 222 (383)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 8 4554
No 77
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.9e-16 Score=178.08 Aligned_cols=143 Identities=10% Similarity=0.017 Sum_probs=125.5
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCC-CceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGK-DKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~t-Gk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
.+.+++|+|+|++|++|+.|++|++||+.+ ++.+.++. +|...|.+++|+|||+.|++++.||+|++||
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d 246 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID----------LHEKSISDMQFSPDLTYFITSSRDTNSFLVD 246 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE----------CCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe----------cCCCceeEEEECCCCCEEEEecCCceEEEEE
Confidence 679999999999999999999999999998 67777764 3568899999999999999999999999999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCC--------------eEEEeeCCCCCCCceEEEEee
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGI--------------NVVVWDTLAPPTSSRASITCH 2365 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~--------------TVrLWD~l~~tg~~v~sL~GH 2365 (2389)
++++ +.+..+. |...+..++|+| +|+++++++ .++ .|++||+ .+++.+..+.+|
T Consensus 247 ~~~~-----~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~---~~~~~~~~~~~~~~~~~~i~~~d~--~~~~~~~~~~~~ 314 (369)
T 3zwl_B 247 VSTL-----QVLKKYE-TDCPLNTAVITP-LKEFIILGG---GQEAKDVTTTSANEGKFEARFYHK--IFEEEIGRVQGH 314 (369)
T ss_dssp TTTC-----CEEEEEE-CSSCEEEEEECS-SSSEEEEEE---CCC-------------CEEEEEET--TTCCEEEEEECC
T ss_pred CCCC-----ceeeeec-CCCCceeEEecC-CCceEEEee---cCCCceEEEEecCCCcceeEEEec--CCCcchhheecc
Confidence 9986 3445554 788999999999 999999874 455 8999998 577889999999
Q ss_pred cCcEEEEeecccchhhhccc
Q 000080 2366 EGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2366 ~~~V~svA~~~~~~~~~s~~ 2385 (2389)
.+.|++++++|+|++.++-+
T Consensus 315 ~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 315 FGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEE
T ss_pred cCcEEEEEECCCCCEEEEEc
Confidence 99999999999999887754
No 78
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.74 E-value=9.4e-17 Score=178.79 Aligned_cols=168 Identities=13% Similarity=0.112 Sum_probs=134.6
Q ss_pred ccceeeccccccccccccccCC--CCc-------CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCc--eeeEecccC
Q 000080 2193 GIGASALGWETQDDFEDYVDPP--ATV-------ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDK--ATATYGVLP 2261 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~--atv-------~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk--~l~Tl~vl~ 2261 (2389)
...|++ + +...++|+..... ..+ +.-.|.+++|+|++++|++|+.|++|++||+.+++ ....+.
T Consensus 64 ~~l~~~-~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--- 138 (337)
T 1gxr_A 64 RHVYTG-G-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT--- 138 (337)
T ss_dssp SEEEEE-C-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE---
T ss_pred cEEEEc-C-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc---
Confidence 345555 4 6666677654211 111 22357999999999999999999999999999887 344442
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCC
Q 000080 2262 AANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSS 2341 (2389)
Q Consensus 2262 gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS 2341 (2389)
+|...|++++|+|+|+.|++++.||+|++||++++ ++...+.+|...|.+++|+| +|++|+++ +
T Consensus 139 -------~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~-----~~~~~~~~~~~~i~~~~~~~-~~~~l~~~---~ 202 (337)
T 1gxr_A 139 -------SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-----TLVRQFQGHTDGASCIDISN-DGTKLWTG---G 202 (337)
T ss_dssp -------CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-----EEEEEECCCSSCEEEEEECT-TSSEEEEE---E
T ss_pred -------cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-----ceeeeeecccCceEEEEECC-CCCEEEEE---e
Confidence 35688999999999999999999999999999976 46778889999999999999 99999997 4
Q ss_pred CCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhcc
Q 000080 2342 NGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2342 ~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
.|++|++||+ .+++.+..+. |.+.+.+++++|+|++.+.-
T Consensus 203 ~dg~i~~~d~--~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~ 242 (337)
T 1gxr_A 203 LDNTVRSWDL--REGRQLQQHD-FTSQIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp TTSEEEEEET--TTTEEEEEEE-CSSCEEEEEECTTSSEEEEE
T ss_pred cCCcEEEEEC--CCCceEeeec-CCCceEEEEECCCCCEEEEE
Confidence 8999999998 3556666664 89999999999999987654
No 79
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.74 E-value=8.5e-17 Score=184.42 Aligned_cols=154 Identities=12% Similarity=0.048 Sum_probs=130.2
Q ss_pred eeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCC------------------------------------
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAA------------------------------------ 2263 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh------------------------------------ 2263 (2389)
-.|.+++|+|++++|++|+.|++|++||+.+++.+..+......
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 229 (425)
T 1r5m_A 150 APIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAI 229 (425)
T ss_dssp SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCE
T ss_pred ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeE
Confidence 35799999999999999999999999999999887766421100
Q ss_pred --------C--CCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCE
Q 000080 2264 --------N--VPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSV 2333 (2389)
Q Consensus 2264 --------~--~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGsl 2333 (2389)
. ....+|...|++++|+|+|+.|++++.||+|++||++++ ++...+.+|...|.+++|+| +| +
T Consensus 230 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-----~~~~~~~~~~~~i~~~~~~~-~~-~ 302 (425)
T 1r5m_A 230 FVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG-----NSQNCFYGHSQSIVSASWVG-DD-K 302 (425)
T ss_dssp EEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB-----SCSEEECCCSSCEEEEEEET-TT-E
T ss_pred EEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-----ccceEecCCCccEEEEEECC-CC-E
Confidence 0 001257789999999999999999999999999999975 46777888999999999999 87 8
Q ss_pred EEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2334 IAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2334 LASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
|+++ +.|++|++||+ .+++.+..+.+|...|.+++++|+|++.++-+
T Consensus 303 l~~~---~~d~~i~i~d~--~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 303 VISC---SMDGSVRLWSL--KQNTLLALSIVDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp EEEE---ETTSEEEEEET--TTTEEEEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred EEEE---eCCCcEEEEEC--CCCcEeEecccCCccEEEEEEcCCCCEEEEEE
Confidence 8886 48999999998 46778899999999999999999999877644
No 80
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.74 E-value=1.3e-17 Score=194.92 Aligned_cols=183 Identities=11% Similarity=0.088 Sum_probs=134.5
Q ss_pred ccccceeeccccccccccccccCCC-------------Cc--Cc------------eeEEEEEEcCCC--CeEEEEeCCC
Q 000080 2191 YAGIGASALGWETQDDFEDYVDPPA-------------TV--EN------------ISTRAFSSHPLR--PFFLVGSSNT 2241 (2389)
Q Consensus 2191 ~~~~~Asg~~~d~~~~~~~~~d~~a-------------tv--~n------------i~VrsVAFsPdG--~~LASGS~Dg 2241 (2389)
.+..+|+| +.|...++|+...... ++ +. -.|.+|+|+|++ .+|++|+.|+
T Consensus 39 ~g~~la~g-~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~ 117 (447)
T 3dw8_B 39 SGELLATG-DKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDK 117 (447)
T ss_dssp SSSEEEEE-ETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSS
T ss_pred CCCEEEEE-cCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCC
Confidence 34566777 7777777777642210 11 11 236899999999 7999999999
Q ss_pred cEEEeecCCCceeeEecccCCCC------------------------------CCCCCCCCCEEEEEECCCCCEEEEEeC
Q 000080 2242 HIYLWEFGKDKATATYGVLPAAN------------------------------VPPPYALASISALQFDHYGHRFASAAL 2291 (2389)
Q Consensus 2242 TIRLWDl~tGk~l~Tl~vl~gh~------------------------------~p~~GH~~~V~sVaFSPDG~~LASgS~ 2291 (2389)
+|++||+.+++.......+.++. .-..+|...|++++|+|||+.||+| .
T Consensus 118 ~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~ 196 (447)
T 3dw8_B 118 TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-D 196 (447)
T ss_dssp CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-C
T ss_pred eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-C
Confidence 99999998765432100000000 0013688999999999999999999 7
Q ss_pred CCcEEEeeCCCCCccCcccce-------eeeecCCCeeEEEEecCCC-CEEEEeecCCCCCeEEEeeCCCCCCCc----e
Q 000080 2292 DGTVCTWQLEVGGRSNVRPME-------SCLCFSSHAMDVSYITSSG-SVIAAAGHSSNGINVVVWDTLAPPTSS----R 2359 (2389)
Q Consensus 2292 DgTVkLWDl~tggrs~~k~l~-------tl~gHs~~V~sVAFSP~DG-slLASAG~sS~D~TVrLWD~l~~tg~~----v 2359 (2389)
|++|++||+++++ +.+. ++.+|...|.+++|+| +| ++||++ +.|++|+|||+. +++. +
T Consensus 197 d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~---~~dg~i~iwd~~--~~~~~~~~~ 266 (447)
T 3dw8_B 197 DLRINLWHLEITD----RSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYS---SSKGTIRLCDMR--ASALCDRHS 266 (447)
T ss_dssp SSEEEEEETTEEE----EEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEE---ETTSCEEEEETT--TCSSSCTTC
T ss_pred CCeEEEEECCCCC----ceeeeeecccccccccCcceEEEEECC-CCCcEEEEE---eCCCeEEEEECc--CCcccccee
Confidence 9999999999542 2332 4678999999999999 77 999997 489999999983 4554 7
Q ss_pred EEEEeecC------------cEEEEeecccchhhhccc
Q 000080 2360 ASITCHEG------------LYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2360 ~sL~GH~~------------~V~svA~~~~~~~~~s~~ 2385 (2389)
+.+.+|.+ .|.+++++|+|+++++-.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 304 (447)
T 3dw8_B 267 KLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD 304 (447)
T ss_dssp EEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE
T ss_pred eEeccCCCccccccccccCceEEEEEECCCCCEEEEee
Confidence 89999987 999999999999987643
No 81
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.74 E-value=1.8e-17 Score=209.28 Aligned_cols=144 Identities=11% Similarity=0.164 Sum_probs=129.4
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.|++++|||+|++||+|+.||+|++||+.+|+.+.++. +|...|++++|+|||++||+|+.||+|++||+
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~----------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ----------VTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE----------CCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe----------cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 46999999999999999999999999999999988874 46688999999999999999999999999999
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCC-CceEEEEeecCcEEEEeecc-cc
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPT-SSRASITCHEGLYDLFLPLK-LL 2378 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg-~~v~sL~GH~~~V~svA~~~-~~ 2378 (2389)
+++ +.+.++.+|.+.|++++|+| +|++||++ +.|++|++||+. ++ ...+.+.+|...|.+++++| +|
T Consensus 85 ~~~-----~~~~~~~~~~~~v~~~~~s~-~~~~l~~~---~~dg~i~vw~~~--~~~~~~~~~~~~~~~v~~~~~~p~~~ 153 (814)
T 3mkq_A 85 NTG-----EKVVDFEAHPDYIRSIAVHP-TKPYVLSG---SDDLTVKLWNWE--NNWALEQTFEGHEHFVMCVAFNPKDP 153 (814)
T ss_dssp TTC-----CEEEEEECCSSCEEEEEECS-SSSEEEEE---ETTSEEEEEEGG--GTSEEEEEEECCSSCEEEEEEETTEE
T ss_pred CCC-----cEEEEEecCCCCEEEEEEeC-CCCEEEEE---cCCCEEEEEECC--CCceEEEEEcCCCCcEEEEEEEcCCC
Confidence 987 46778889999999999999 99999987 489999999983 34 55789999999999999999 88
Q ss_pred hhhhccc
Q 000080 2379 NFALSKC 2385 (2389)
Q Consensus 2379 ~~~~s~~ 2385 (2389)
+.+++-+
T Consensus 154 ~~l~~~~ 160 (814)
T 3mkq_A 154 STFASGC 160 (814)
T ss_dssp EEEEEEE
T ss_pred CEEEEEe
Confidence 8777654
No 82
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.73 E-value=7.2e-18 Score=189.89 Aligned_cols=141 Identities=16% Similarity=0.138 Sum_probs=119.5
Q ss_pred eEEEEEEcCC----CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECC-CCCEEEEEeCCCcE
Q 000080 2221 STRAFSSHPL----RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDH-YGHRFASAALDGTV 2295 (2389)
Q Consensus 2221 ~VrsVAFsPd----G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSP-DG~~LASgS~DgTV 2295 (2389)
.|.+++|+|+ |++|++|+.|++|++||+.+++.+.++. +|...|++++|+| +|+.||+|+.||+|
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~----------~~~~~i~~~~~~~~~~~~l~s~~~dg~i 140 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV----------GHGNAINELKFHPRDPNLLLSVSKDHAL 140 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE----------SCCSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec----------CCCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 4799999999 6799999999999999999999988874 4668999999999 99999999999999
Q ss_pred EEeeCCCCCccCcccceee---eecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEE-----------
Q 000080 2296 CTWQLEVGGRSNVRPMESC---LCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRAS----------- 2361 (2389)
Q Consensus 2296 kLWDl~tggrs~~k~l~tl---~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~s----------- 2361 (2389)
++||++++ +....+ .+|...|.+++|+| +|++|++++ .|++|++||+. +++.++.
T Consensus 141 ~iwd~~~~-----~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~---~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~ 209 (366)
T 3k26_A 141 RLWNIQTD-----TLVAIFGGVEGHRDEVLSADYDL-LGEKIMSCG---MDHSLKLWRIN--SKRMMNAIKESYDYNPNK 209 (366)
T ss_dssp EEEETTTT-----EEEEEECSTTSCSSCEEEEEECT-TSSEEEEEE---TTSCEEEEESC--SHHHHHHHHHHHTCCGGG
T ss_pred EEEEeecC-----eEEEEecccccccCceeEEEECC-CCCEEEEec---CCCCEEEEECC--CCccccccceeEEecCCC
Confidence 99999986 344555 68999999999999 999999974 89999999983 3333333
Q ss_pred -----------------EEeecCcEEEEeecccchhhhcc
Q 000080 2362 -----------------ITCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2362 -----------------L~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
+.+|.+.|.+++++ |+++++-
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~ 247 (366)
T 3k26_A 210 TNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSK 247 (366)
T ss_dssp CSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEE
T ss_pred CcccccceeeccCccccccCCcceEEEEEEc--CCEEEEE
Confidence 33499999999998 6666654
No 83
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.73 E-value=2.4e-17 Score=183.55 Aligned_cols=150 Identities=11% Similarity=0.064 Sum_probs=126.4
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.|.+++|+|+|++|++|+ |++|++||+.+++....+..+.. .+|...|++++|+|||+.|++|+.||+|++||+
T Consensus 53 ~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDC-----LNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp CCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEEC-----SCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred ceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccc-----cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 458899999999999999 99999999988764433321111 246789999999999999999999999999999
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchh
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~ 2380 (2389)
+++. ......+.+|...|.+++|+| +|++|+++ +.|++|++||+ .+++.+..+.+|.+.|.+++++|+|++
T Consensus 127 ~~~~---~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~---~~dg~v~~~d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~ 197 (337)
T 1gxr_A 127 AAPT---PRIKAELTSSAPACYALAISP-DSKVCFSC---CSDGNIAVWDL--HNQTLVRQFQGHTDGASCIDISNDGTK 197 (337)
T ss_dssp CCC-----EEEEEEECSSSCEEEEEECT-TSSEEEEE---ETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred CCCC---cceeeecccCCCceEEEEECC-CCCEEEEE---eCCCcEEEEeC--CCCceeeeeecccCceEEEEECCCCCE
Confidence 9862 135677888999999999999 99999987 48999999998 466778999999999999999999998
Q ss_pred hhccc
Q 000080 2381 ALSKC 2385 (2389)
Q Consensus 2381 ~~s~~ 2385 (2389)
+++-+
T Consensus 198 l~~~~ 202 (337)
T 1gxr_A 198 LWTGG 202 (337)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87644
No 84
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.73 E-value=2.6e-17 Score=207.70 Aligned_cols=172 Identities=15% Similarity=0.135 Sum_probs=138.8
Q ss_pred cccceeeccccccccccccccCC--CCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDPP--ATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPP 2267 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~--atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~ 2267 (2389)
..++|+| ++|.+.++|+..... .++ +.-.|.+++|+|++++|+|||.|++|++||... .+..++. .. .
T Consensus 442 g~~l~sg-s~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~--~~----~ 513 (694)
T 3dm0_A 442 GQFALSG-SWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG-ECKYTIS--EG----G 513 (694)
T ss_dssp SSEEEEE-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS-CEEEEEC--SS----T
T ss_pred CCEEEEE-eCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC-Ccceeec--cC----C
Confidence 3567888 889999999874221 111 223579999999999999999999999999854 4443332 11 1
Q ss_pred CCCCCCEEEEEECCCC--CEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCe
Q 000080 2268 PYALASISALQFDHYG--HRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGIN 2345 (2389)
Q Consensus 2268 ~GH~~~V~sVaFSPDG--~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~T 2345 (2389)
.+|...|++++|+|++ ..|++|+.|++|++||++++ +...++.+|.+.|++++|+| +|++|||+ +.|++
T Consensus 514 ~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~-----~~~~~~~~h~~~v~~v~~sp-dg~~l~sg---~~Dg~ 584 (694)
T 3dm0_A 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC-----KLRSTLAGHTGYVSTVAVSP-DGSLCASG---GKDGV 584 (694)
T ss_dssp TSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC-----CEEEEECCCSSCEEEEEECT-TSSEEEEE---ETTSB
T ss_pred CCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC-----cEEEEEcCCCCCEEEEEEeC-CCCEEEEE---eCCCe
Confidence 3688999999999998 68999999999999999975 46678899999999999999 99999997 48999
Q ss_pred EEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhc
Q 000080 2346 VVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2346 VrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s 2383 (2389)
|+|||+ .+++++..+.. ...|.+++++|++.++.+
T Consensus 585 i~iwd~--~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~ 619 (694)
T 3dm0_A 585 VLLWDL--AEGKKLYSLEA-NSVIHALCFSPNRYWLCA 619 (694)
T ss_dssp CEEEET--TTTEEEECCBC-SSCEEEEEECSSSSEEEE
T ss_pred EEEEEC--CCCceEEEecC-CCcEEEEEEcCCCcEEEE
Confidence 999998 46677777764 567999999999987654
No 85
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.73 E-value=1.1e-16 Score=190.71 Aligned_cols=170 Identities=16% Similarity=0.168 Sum_probs=135.1
Q ss_pred cceeeccccccccccccccC---------CCC--cCceeEEEEEEcC-CCCeEEEEeCCCcEEEeecCCC---ceeeEec
Q 000080 2194 IGASALGWETQDDFEDYVDP---------PAT--VENISTRAFSSHP-LRPFFLVGSSNTHIYLWEFGKD---KATATYG 2258 (2389)
Q Consensus 2194 ~~Asg~~~d~~~~~~~~~d~---------~at--v~ni~VrsVAFsP-dG~~LASGS~DgTIRLWDl~tG---k~l~Tl~ 2258 (2389)
.+++| +.+....+|+.... ... .+...|.+++|+| ++.+|++|+.|++|++||++++ +.+.++.
T Consensus 196 ~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~ 274 (430)
T 2xyi_A 196 YLLSA-SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD 274 (430)
T ss_dssp EEEEE-CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE
T ss_pred eEEEE-eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee
Confidence 56666 66667777766431 111 1223579999999 6789999999999999999987 4555553
Q ss_pred ccCCCCCCCCCCCCCEEEEEECCCCC-EEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCC-CEEEE
Q 000080 2259 VLPAANVPPPYALASISALQFDHYGH-RFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSG-SVIAA 2336 (2389)
Q Consensus 2259 vl~gh~~p~~GH~~~V~sVaFSPDG~-~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DG-slLAS 2336 (2389)
+|...|++|+|+|+|+ .||+|+.||+|++||+++.+ .++.++.+|...|.+++|+| +| .+||+
T Consensus 275 ----------~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~----~~~~~~~~h~~~v~~i~~sp-~~~~~l~s 339 (430)
T 2xyi_A 275 ----------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSP-HNETILAS 339 (430)
T ss_dssp ----------CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT----SCSEEEECCSSCEEEEEECS-SCTTEEEE
T ss_pred ----------cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC----CCeEEeecCCCCEEEEEECC-CCCCEEEE
Confidence 3568899999999997 79999999999999999753 57888899999999999999 66 57888
Q ss_pred eecCCCCCeEEEeeCCCCC------------CCceEEEEeecCcEEEEeecccchhhh
Q 000080 2337 AGHSSNGINVVVWDTLAPP------------TSSRASITCHEGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2337 AG~sS~D~TVrLWD~l~~t------------g~~v~sL~GH~~~V~svA~~~~~~~~~ 2382 (2389)
+| .|++|+|||+.... .+.+..+.+|.+.|++++++|+++|.|
T Consensus 340 ~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 394 (430)
T 2xyi_A 340 SG---TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWII 394 (430)
T ss_dssp EE---TTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEE
T ss_pred Ee---CCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEE
Confidence 64 89999999984211 255778899999999999999999644
No 86
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.73 E-value=1.1e-17 Score=195.31 Aligned_cols=150 Identities=9% Similarity=0.100 Sum_probs=117.4
Q ss_pred eeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCc-----------eeeEecccCCCCCCCCCCC------------CCEEE
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDK-----------ATATYGVLPAANVPPPYAL------------ASISA 2276 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk-----------~l~Tl~vl~gh~~p~~GH~------------~~V~s 2276 (2389)
-.|.+|+|+|+|++||+|+.||+|+|||+.+++ ...++. ||. ..|++
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~----------~h~~~~~~~~~~~~~~~V~~ 98 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ----------SHEPEFDYLKSLEIEEKINK 98 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE----------CCCCEEEGGGTEEECCCCCE
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc----------cccccccccccccccCceEE
Confidence 356999999999999999999999999998877 355553 455 77999
Q ss_pred EEECCCC--CEEEEEeCCCcEEEeeCCCCCcc--------------------C--------------ccccee-eeecCC
Q 000080 2277 LQFDHYG--HRFASAALDGTVCTWQLEVGGRS--------------------N--------------VRPMES-CLCFSS 2319 (2389)
Q Consensus 2277 VaFSPDG--~~LASgS~DgTVkLWDl~tggrs--------------------~--------------~k~l~t-l~gHs~ 2319 (2389)
|+|+|+| ..|++|+.||+|++||+.++... . ..+... ..+|..
T Consensus 99 l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 99 IRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 9999999 89999999999999999763100 0 000112 368999
Q ss_pred CeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceE-------EEEeecCcEEEEeecccc-hhhhccc
Q 000080 2320 HAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRA-------SITCHEGLYDLFLPLKLL-NFALSKC 2385 (2389)
Q Consensus 2320 ~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~-------sL~GH~~~V~svA~~~~~-~~~~s~~ 2385 (2389)
.|.+++|+| +|++||++ .|++|+|||+. ..+++++ .+.+|.+.|++++++|+| +.+++-+
T Consensus 179 ~v~~~~~~~-~~~~l~s~----~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~ 246 (447)
T 3dw8_B 179 HINSISINS-DYETYLSA----DDLRINLWHLE-ITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS 246 (447)
T ss_dssp CCCEEEECT-TSSEEEEE----CSSEEEEEETT-EEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE
T ss_pred ceEEEEEcC-CCCEEEEe----CCCeEEEEECC-CCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe
Confidence 999999999 99999984 59999999983 1233344 256899999999999999 7776643
No 87
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.73 E-value=4e-17 Score=217.07 Aligned_cols=144 Identities=10% Similarity=0.068 Sum_probs=130.5
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
|.+++|+|||++||+|+.||+|++||+.+++++.++. +|.+.|++++|+|||++||+|+.||+|++||++
T Consensus 618 v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~----------~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK----------AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC----------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec----------cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 5899999999999999999999999999999988874 467899999999999999999999999999999
Q ss_pred CCCccCcccceeeeecCCCeeEEEEecC-CCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchh
Q 000080 2302 VGGRSNVRPMESCLCFSSHAMDVSYITS-SGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2302 tggrs~~k~l~tl~gHs~~V~sVAFSP~-DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~ 2380 (2389)
++ +++.++.+|...|.+++|+|+ ++.++|++ +.|++|++||+ .+++++.++.+|.+.|++++++|+|++
T Consensus 688 ~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg---~~d~~v~vwd~--~~~~~~~~~~~h~~~v~~~~~sp~~~~ 757 (1249)
T 3sfz_A 688 TG-----KLVHTYDEHSEQVNCCHFTNKSNHLLLATG---SNDFFLKLWDL--NQKECRNTMFGHTNSVNHCRFSPDDEL 757 (1249)
T ss_dssp TC-----CEEEEEECCSSCEEEEEECSSSSCCEEEEE---ETTSCEEEEET--TSSSEEEEECCCSSCEEEEEECSSTTE
T ss_pred CC-----ceEEEEcCCCCcEEEEEEecCCCceEEEEE---eCCCeEEEEEC--CCcchhheecCCCCCEEEEEEecCCCE
Confidence 87 467888999999999999994 34578886 58999999998 577889999999999999999999998
Q ss_pred hhccc
Q 000080 2381 ALSKC 2385 (2389)
Q Consensus 2381 ~~s~~ 2385 (2389)
.++-+
T Consensus 758 l~s~s 762 (1249)
T 3sfz_A 758 LASCS 762 (1249)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87754
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.72 E-value=1.2e-16 Score=187.74 Aligned_cols=172 Identities=10% Similarity=0.101 Sum_probs=134.7
Q ss_pred ccceeeccccccccccccccCCCC---c--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPPAT---V--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPP 2267 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~at---v--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~ 2267 (2389)
.+.++| +.+....+|+....... . +.-.|.+++|+|+|++|++|+.|++|++||+.+++.+.++.
T Consensus 187 ~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~--------- 256 (401)
T 4aez_A 187 HVLSSG-SRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT--------- 256 (401)
T ss_dssp TEEEEE-ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC---------
T ss_pred CEEEEE-cCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec---------
Confidence 345556 66666667765321111 1 12367999999999999999999999999999999888773
Q ss_pred CCCCCCEEEEEECCCC-CEEEEEe--CCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCC
Q 000080 2268 PYALASISALQFDHYG-HRFASAA--LDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGI 2344 (2389)
Q Consensus 2268 ~GH~~~V~sVaFSPDG-~~LASgS--~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~ 2344 (2389)
+|...|.+++|+|+| +.+++|+ .|++|++||++++ +++.++. |...|.+++|+| +|+.|++++ ++.|+
T Consensus 257 -~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~-----~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~-g~~dg 327 (401)
T 4aez_A 257 -NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG-----ARVNTVD-AGSQVTSLIWSP-HSKEIMSTH-GFPDN 327 (401)
T ss_dssp -CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC-----CEEEEEE-CSSCEEEEEECS-SSSEEEEEE-CTTTC
T ss_pred -CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC-----CEEEEEe-CCCcEEEEEECC-CCCeEEEEe-ecCCC
Confidence 356889999999987 5677765 7999999999986 3455554 677899999999 899999863 35899
Q ss_pred eEEEeeCCCCCCCc--eEEEEeecCcEEEEeecccchhhhccc
Q 000080 2345 NVVVWDTLAPPTSS--RASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2345 TVrLWD~l~~tg~~--v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+|+|||+. +++. +..+.+|.+.|.+++++|+|++.++-+
T Consensus 328 ~i~v~~~~--~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 328 NLSIWSYS--SSGLTKQVDIPAHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp EEEEEEEE--TTEEEEEEEEECCSSCCCEEEECTTSSEEEEEC
T ss_pred cEEEEecC--CccceeEEEecCCCCCEEEEEECCCCCEEEEEe
Confidence 99999983 4334 455889999999999999999887653
No 89
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.72 E-value=1.8e-16 Score=178.23 Aligned_cols=134 Identities=15% Similarity=0.197 Sum_probs=112.6
Q ss_pred eEEEEEEcCC---CCeEEEEeCCCcEEEeecCC-Ccee-eEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcE
Q 000080 2221 STRAFSSHPL---RPFFLVGSSNTHIYLWEFGK-DKAT-ATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTV 2295 (2389)
Q Consensus 2221 ~VrsVAFsPd---G~~LASGS~DgTIRLWDl~t-Gk~l-~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTV 2295 (2389)
.|.+|+|+|+ |++||+|+.|++|++||+.+ ++.+ .++. +|...|++++|+|||++||+|+.||+|
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~l~s~~~dg~v 110 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ----------MHTGPVLDVCWSDDGSKVFTASCDKTA 110 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE----------ECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec----------cccCCEEEEEECcCCCEEEEEcCCCcE
Confidence 4699999999 69999999999999999987 5554 4453 467899999999999999999999999
Q ss_pred EEeeCCCCCccCcccceeeeecCCCeeEEEE--ecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEe
Q 000080 2296 CTWQLEVGGRSNVRPMESCLCFSSHAMDVSY--ITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFL 2373 (2389)
Q Consensus 2296 kLWDl~tggrs~~k~l~tl~gHs~~V~sVAF--SP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA 2373 (2389)
++||++++ + .....+|...|.+++| +| +|++|+++ +.|++|++||+ .+++.++.+..|. .+.++.
T Consensus 111 ~iwd~~~~-----~-~~~~~~~~~~v~~~~~~~~~-~~~~l~~~---~~dg~i~vwd~--~~~~~~~~~~~~~-~~~~~~ 177 (368)
T 3mmy_A 111 KMWDLSSN-----Q-AIQIAQHDAPVKTIHWIKAP-NYSCVMTG---SWDKTLKFWDT--RSSNPMMVLQLPE-RCYCAD 177 (368)
T ss_dssp EEEETTTT-----E-EEEEEECSSCEEEEEEEECS-SCEEEEEE---ETTSEEEEECS--SCSSCSEEEECSS-CEEEEE
T ss_pred EEEEcCCC-----C-ceeeccccCceEEEEEEeCC-CCCEEEEc---cCCCcEEEEEC--CCCcEEEEEecCC-CceEEE
Confidence 99999976 2 2346789999999999 77 88999997 48999999998 4677888888775 566666
Q ss_pred eccc
Q 000080 2374 PLKL 2377 (2389)
Q Consensus 2374 ~~~~ 2377 (2389)
+...
T Consensus 178 ~~~~ 181 (368)
T 3mmy_A 178 VIYP 181 (368)
T ss_dssp EETT
T ss_pred ecCC
Confidence 6554
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.71 E-value=1.2e-16 Score=187.88 Aligned_cols=162 Identities=14% Similarity=0.161 Sum_probs=136.1
Q ss_pred cccccccccccccCCC--C--c-CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCE
Q 000080 2200 GWETQDDFEDYVDPPA--T--V-ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASI 2274 (2389)
Q Consensus 2200 ~~d~~~~~~~~~d~~a--t--v-~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V 2274 (2389)
+.+...++|+...... . . +.-.|.+++|+|+|++|++|+.||+|++||+.+++.+.++. +|...|
T Consensus 110 ~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----------~~~~~v 179 (401)
T 4aez_A 110 ALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA----------GHQARV 179 (401)
T ss_dssp EETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC----------CCSSCE
T ss_pred ECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec----------CCCCce
Confidence 4566667776532111 1 1 23467999999999999999999999999999999988874 467899
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCC
Q 000080 2275 SALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAP 2354 (2389)
Q Consensus 2275 ~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~ 2354 (2389)
.+++| +|+.|++|+.||+|++||+++.+ .....+.+|...|.+++|+| +|++||++ +.|++|++||+ .
T Consensus 180 ~~~~~--~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~s~---~~d~~v~iwd~--~ 247 (401)
T 4aez_A 180 GCLSW--NRHVLSSGSRSGAIHHHDVRIAN----HQIGTLQGHSSEVCGLAWRS-DGLQLASG---GNDNVVQIWDA--R 247 (401)
T ss_dssp EEEEE--ETTEEEEEETTSEEEEEETTSSS----CEEEEEECCSSCEEEEEECT-TSSEEEEE---ETTSCEEEEET--T
T ss_pred EEEEE--CCCEEEEEcCCCCEEEEecccCc----ceeeEEcCCCCCeeEEEEcC-CCCEEEEE---eCCCeEEEccC--C
Confidence 99999 67899999999999999999653 46788899999999999999 99999997 48999999998 4
Q ss_pred CCCceEEEEeecCcEEEEeecccchhhhc
Q 000080 2355 PTSSRASITCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2355 tg~~v~sL~GH~~~V~svA~~~~~~~~~s 2383 (2389)
+++.+..+.+|...|.+++++|+|+..+.
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~p~~~~ll~ 276 (401)
T 4aez_A 248 SSIPKFTKTNHNAAVKAVAWCPWQSNLLA 276 (401)
T ss_dssp CSSEEEEECCCSSCCCEEEECTTSTTEEE
T ss_pred CCCccEEecCCcceEEEEEECCCCCCEEE
Confidence 56778999999999999999999877664
No 91
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.70 E-value=1.7e-17 Score=196.24 Aligned_cols=146 Identities=14% Similarity=0.093 Sum_probs=113.4
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeE--ecccCCCCCCCCCCCCCEEEEEECC--------CCCEEEEEeCC
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATAT--YGVLPAANVPPPYALASISALQFDH--------YGHRFASAALD 2292 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~T--l~vl~gh~~p~~GH~~~V~sVaFSP--------DG~~LASgS~D 2292 (2389)
....++|++.+||+||.|++|||||..++++... +.. ..||.+.|++|+|+| ||++|||||.|
T Consensus 93 ~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~-------~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGG-------KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp ----CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECT-------TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred ceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecc-------cCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 4457788899999999999999999988876432 222 347889999999998 99999999999
Q ss_pred CcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceE------------
Q 000080 2293 GTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRA------------ 2360 (2389)
Q Consensus 2293 gTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~------------ 2360 (2389)
+||||||++++ .+...+.+|...|.+|+|+|+++.+||++ +.|++|||||+. +++...
T Consensus 166 ~tv~~Wd~~~~-----~~~~~~~~~~~~v~~v~~~p~~~~~l~~~---~~d~~v~~wd~~--t~~~~~~~~~~~~~~~~~ 235 (393)
T 4gq1_A 166 CTLIIWRLTDE-----GPILAGYPLSSPGISVQFRPSNPNQLIVG---ERNGNIRIFDWT--LNLSAEENSQTELVKNPW 235 (393)
T ss_dssp SEEEEEEEETT-----EEEEEEEECSSCEEEEEEETTEEEEEEEE---ETTSEEEEEETT--CCC----------CSCCC
T ss_pred CeEEEEECCCC-----ceeeeecCCCCCcEEEEECCCCCceEEec---CCCCEEEEEECC--CCcccccccccCCcccce
Confidence 99999999875 35677788999999999999444588886 589999999983 332221
Q ss_pred -------------EEEeecCcEEEEeec-ccchhhhccc
Q 000080 2361 -------------SITCHEGLYDLFLPL-KLLNFALSKC 2385 (2389)
Q Consensus 2361 -------------sL~GH~~~V~svA~~-~~~~~~~s~~ 2385 (2389)
...+|...|.+++++ ++|+.+++-+
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s 274 (393)
T 4gq1_A 236 LLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMC 274 (393)
T ss_dssp SEEEESGGGC------CCSSSCSEEEEETTTTCEEEEEC
T ss_pred EEecccccceeeeecccccccceeeeeecCCCCEEEEEe
Confidence 235788889999886 7888887754
No 92
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.70 E-value=5.8e-17 Score=213.47 Aligned_cols=170 Identities=7% Similarity=0.000 Sum_probs=137.8
Q ss_pred ccceeeccccccccccccccCCC--Cc-CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPPA--TV-ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPY 2269 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~a--tv-~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~G 2269 (2389)
.++|+| +.|.+.++|+...... .. +...|++|+|+| |++|||||.|++|++||+.+++++.++.
T Consensus 30 ~~lAsg-s~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~----------- 96 (902)
T 2oaj_A 30 NLLAIA-TVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF----------- 96 (902)
T ss_dssp TEEEEE-ETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-----------
T ss_pred CEEEEE-eCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-----------
Confidence 577888 8888888887532111 11 124679999999 8899999999999999999999988874
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccc---------eeeeecCCCeeEEEEecCCCCEEEEeecC
Q 000080 2270 ALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPM---------ESCLCFSSHAMDVSYITSSGSVIAAAGHS 2340 (2389)
Q Consensus 2270 H~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l---------~tl~gHs~~V~sVAFSP~DGslLASAG~s 2340 (2389)
|...|++|+|+|+|++||+|+.||+|++||++++. . .++ ..+.+|.+.|.+++|+|+++.+||+|
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~--~-~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g--- 170 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQ--L-SSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS--- 170 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTE--E-EEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE---
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCc--c-ccceeccccccccccccCCCCeEEEEEccCCCCEEEEE---
Confidence 23679999999999999999999999999999752 1 111 34578999999999999556788875
Q ss_pred CCCCeEEEeeCCCCCCCceEEEEee------------------cCcEEEEeecccchhhhcc
Q 000080 2341 SNGINVVVWDTLAPPTSSRASITCH------------------EGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2341 S~D~TVrLWD~l~~tg~~v~sL~GH------------------~~~V~svA~~~~~~~~~s~ 2384 (2389)
+.|++| |||+ .++++++.+.+| .+.|++++++|+|+++++-
T Consensus 171 ~~dg~v-lWd~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg 229 (902)
T 2oaj_A 171 YEYVTL-TYSL--VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI 229 (902)
T ss_dssp CSSCEE-EEET--TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE
T ss_pred eCCCcE-EEEC--CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE
Confidence 589999 9998 466778888776 5789999999999988764
No 93
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.5e-16 Score=183.82 Aligned_cols=169 Identities=11% Similarity=0.144 Sum_probs=131.8
Q ss_pred ccccccccccccc-----CCCCcC-ceeEEEEEEcCCCCeEEEEeCCCcEEEeecCC----CceeeEecccCCCCCCCCC
Q 000080 2200 GWETQDDFEDYVD-----PPATVE-NISTRAFSSHPLRPFFLVGSSNTHIYLWEFGK----DKATATYGVLPAANVPPPY 2269 (2389)
Q Consensus 2200 ~~d~~~~~~~~~d-----~~atv~-ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~t----Gk~l~Tl~vl~gh~~p~~G 2269 (2389)
+.|...++|+... +..+.. .-.|.+++|+|+|++||+|+.|++|++||+.+ .+.+.++. +
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~----------~ 111 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS----------N 111 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC----------C
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc----------C
Confidence 5566667776542 222222 24679999999999999999999999999987 34666552 4
Q ss_pred CCCCEEEEEECCC-CCEEEEEeCCCcEEEeeCCCCCcc----CcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCC
Q 000080 2270 ALASISALQFDHY-GHRFASAALDGTVCTWQLEVGGRS----NVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGI 2344 (2389)
Q Consensus 2270 H~~~V~sVaFSPD-G~~LASgS~DgTVkLWDl~tggrs----~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~ 2344 (2389)
|...|++++|+|+ +++||+|+.||+|++||++++... ....+....+|...|.+++|+|+++.+||++ +.|+
T Consensus 112 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~dg 188 (416)
T 2pm9_A 112 HSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA---GSSN 188 (416)
T ss_dssp SSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEE---SSSS
T ss_pred CccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEE---cCCC
Confidence 6789999999999 899999999999999999986200 1112234578999999999999337899986 5899
Q ss_pred eEEEeeCCCCCCCceEEEEee------cCcEEEEeecccch-hhhc
Q 000080 2345 NVVVWDTLAPPTSSRASITCH------EGLYDLFLPLKLLN-FALS 2383 (2389)
Q Consensus 2345 TVrLWD~l~~tg~~v~sL~GH------~~~V~svA~~~~~~-~~~s 2383 (2389)
+|++||+ .+++.+..+..| ...|.+++++|+|. .+++
T Consensus 189 ~v~iwd~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 189 FASIWDL--KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CEEEEET--TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred CEEEEEC--CCCCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 9999998 466778888877 89999999999984 4443
No 94
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.70 E-value=8.7e-17 Score=192.11 Aligned_cols=148 Identities=11% Similarity=0.032 Sum_probs=127.3
Q ss_pred eEEEEEEcCCCCeE-EEEeCCCcEEEeecC--CCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEE
Q 000080 2221 STRAFSSHPLRPFF-LVGSSNTHIYLWEFG--KDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCT 2297 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~L-ASGS~DgTIRLWDl~--tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkL 2297 (2389)
.|++++|+|+|++| |+|+.|++|++||+. +++++.++. .| +|...|++|+|+|||++||+|+.||+|++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~---~~-----~~~~~v~~~~~sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK---RF-----CFSKRPNAISIAEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE---EE-----ECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee---cc-----cCCCCceEEEEcCCCCEEEEEeCCCcEEE
Confidence 46999999999996 999999999999998 888888774 12 24578999999999999999999999999
Q ss_pred eeCCCCCccCcc-cceeeeecCCCeeEEEEecCC---CCEEEEeecCCCCCeEEEeeCCCCCCCceEE-EEeecCcEEEE
Q 000080 2298 WQLEVGGRSNVR-PMESCLCFSSHAMDVSYITSS---GSVIAAAGHSSNGINVVVWDTLAPPTSSRAS-ITCHEGLYDLF 2372 (2389)
Q Consensus 2298 WDl~tggrs~~k-~l~tl~gHs~~V~sVAFSP~D---GslLASAG~sS~D~TVrLWD~l~~tg~~v~s-L~GH~~~V~sv 2372 (2389)
|++.++. ... +...+.+|...|.+++|+| + |++||++ +.|++|+|||+ .+++++.. +.+|.+.|+++
T Consensus 176 ~~~~~~~--~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~---~~d~~i~vwd~--~~~~~~~~~~~~h~~~v~~~ 247 (450)
T 2vdu_B 176 IDINSIP--EEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITS---DRDEHIKISHY--PQCFIVDKWLFGHKHFVSSI 247 (450)
T ss_dssp EETTSCC--CSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEE---ETTSCEEEEEE--SCTTCEEEECCCCSSCEEEE
T ss_pred EecCCcc--cccccceeeecccCceEEEEEcC-CCCCCcEEEEE---cCCCcEEEEEC--CCCceeeeeecCCCCceEEE
Confidence 9998863 112 4557889999999999999 8 8999997 48999999998 56777777 66999999999
Q ss_pred eecccchhhhccc
Q 000080 2373 LPLKLLNFALSKC 2385 (2389)
Q Consensus 2373 A~~~~~~~~~s~~ 2385 (2389)
+++ +|+++++-+
T Consensus 248 ~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 248 CCG-KDYLLLSAG 259 (450)
T ss_dssp EEC-STTEEEEEE
T ss_pred EEC-CCCEEEEEe
Confidence 999 999888754
No 95
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.70 E-value=2.9e-16 Score=174.39 Aligned_cols=142 Identities=12% Similarity=0.092 Sum_probs=119.8
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
...|+|||++ +||+| .|++|||||+.+|+++++++ .| +|...|++|+|+|+|++||||+.||+|++||++
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~---~~-----~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~ 97 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQ---ME-----QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ 97 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEE---CC-----STTCCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEE---ec-----CCCCeEEEEEECCCCCEEEEEECCCcEEEeecC
Confidence 4568999986 67665 59999999999999998875 22 467889999999999999999999999999999
Q ss_pred CCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhh
Q 000080 2302 VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFA 2381 (2389)
Q Consensus 2302 tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~ 2381 (2389)
++ +++.++.+|...+.++++. +.+||++ +.|+++++|+.. .....+..+.+|...+.++++++.|+..
T Consensus 98 ~~-----~~~~~~~~h~~~~~~~~~~---~~~l~s~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 165 (318)
T 4ggc_A 98 QQ-----KRLRNMTSHSARVGSLSWN---SYILSSG---SRSGHIHHHDVR-VAEHHVATLSGHSQEVCGLRWAPDGRHL 165 (318)
T ss_dssp TT-----EEEEEEECCSSCEEEEEEE---TTEEEEE---ETTSEEEEEETT-SSSCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred Cc-----eeEEEecCccceEEEeecC---CCEEEEE---ecCCceEeeecC-CCceeEEEEcCccCceEEEEEcCCCCEE
Confidence 86 5778889999988766655 4889986 589999999973 2334578999999999999999999988
Q ss_pred hccc
Q 000080 2382 LSKC 2385 (2389)
Q Consensus 2382 ~s~~ 2385 (2389)
++-+
T Consensus 166 ~s~~ 169 (318)
T 4ggc_A 166 ASGG 169 (318)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7643
No 96
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.7e-16 Score=175.45 Aligned_cols=165 Identities=18% Similarity=0.220 Sum_probs=132.0
Q ss_pred ccceeeccccccccccccccCCCCc--CceeEEEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPPATV--ENISTRAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPY 2269 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~atv--~ni~VrsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~G 2269 (2389)
...+++ +.+...++|+........ +.-.|.+++|+| ++++|++|+.|++|++|| .++.+.++. . .
T Consensus 115 ~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~---~------~ 182 (313)
T 3odt_A 115 GVVISG-SWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFS---G------I 182 (313)
T ss_dssp TEEEEE-ETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEEC---S------S
T ss_pred CEEEEE-eCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEe---c------c
Confidence 345555 555556666522111111 123568999999 999999999999999999 456666664 1 2
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEe
Q 000080 2270 ALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVW 2349 (2389)
Q Consensus 2270 H~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLW 2349 (2389)
|...|.+++|+|+|+ |++|+.||+|++||++++ +++..+.+|...|.+++|+| +|. |+++ +.|++|++|
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~~i~~~~~~~-~~~-l~~~---~~dg~v~iw 251 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG-----DVLRTYEGHESFVYCIKLLP-NGD-IVSC---GEDRTVRIW 251 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC-----CEEEEEECCSSCEEEEEECT-TSC-EEEE---ETTSEEEEE
T ss_pred CcccEEEEEEcCCCe-EEEccCCCeEEEEECCch-----hhhhhhhcCCceEEEEEEec-CCC-EEEE---ecCCEEEEE
Confidence 568899999999998 999999999999999986 46788899999999999999 875 6676 489999999
Q ss_pred eCCCCCCCceEEEEeecCcEEEEeecccchhhh
Q 000080 2350 DTLAPPTSSRASITCHEGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2350 D~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~ 2382 (2389)
|+ .+++.++.+.+|.+.|++++++|+|+++.
T Consensus 252 d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 282 (313)
T 3odt_A 252 SK--ENGSLKQVITLPAISIWSVDCMSNGDIIV 282 (313)
T ss_dssp CT--TTCCEEEEEECSSSCEEEEEECTTSCEEE
T ss_pred EC--CCCceeEEEeccCceEEEEEEccCCCEEE
Confidence 98 56788999999999999999999998553
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.70 E-value=6.8e-17 Score=189.98 Aligned_cols=180 Identities=6% Similarity=-0.043 Sum_probs=139.9
Q ss_pred ccccceeecccccccccccccc---CC--C-Cc---CceeEEEEEEcCCCCeEEEEeCCCcEEEeecC---CCceeeEec
Q 000080 2191 YAGIGASALGWETQDDFEDYVD---PP--A-TV---ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFG---KDKATATYG 2258 (2389)
Q Consensus 2191 ~~~~~Asg~~~d~~~~~~~~~d---~~--a-tv---~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~---tGk~l~Tl~ 2258 (2389)
....+|+| +.|.+.++|+... .. . .. +.-.|.+++|+|++++|++|+.|++|++||+. +|+++.++.
T Consensus 75 ~~~~l~s~-s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 153 (437)
T 3gre_A 75 ETPYLITG-SDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLN 153 (437)
T ss_dssp SSCEEEEE-ETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEE
T ss_pred CCCEEEEe-cCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccc
Confidence 34578888 8888999998754 11 1 11 13468999999999999999999999999994 666655442
Q ss_pred ccCCCC-----CCCCCCCCCEEEEE--ECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeee--cCCCeeEEEEecC
Q 000080 2259 VLPAAN-----VPPPYALASISALQ--FDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLC--FSSHAMDVSYITS 2329 (2389)
Q Consensus 2259 vl~gh~-----~p~~GH~~~V~sVa--FSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~g--Hs~~V~sVAFSP~ 2329 (2389)
+|. ..+.++...+.+++ ++|||+.|++|+.||+|++||++++ +++.++.+ |...|.+++|+|
T Consensus 154 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-----~~~~~~~~~~h~~~v~~~~~s~- 224 (437)
T 3gre_A 154 ---CECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL-----ERLQIIENSPRHGAVSSICIDE- 224 (437)
T ss_dssp ---EEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC-----CEEEEEECCGGGCCEEEEEECT-
T ss_pred ---cceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-----eeeEEEccCCCCCceEEEEECC-
Confidence 110 00111346677777 6689999999999999999999986 46777888 899999999999
Q ss_pred CCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE-eecCcEEEE----eecccchhhhccc
Q 000080 2330 SGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT-CHEGLYDLF----LPLKLLNFALSKC 2385 (2389)
Q Consensus 2330 DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~-GH~~~V~sv----A~~~~~~~~~s~~ 2385 (2389)
+|++||++ +.|++|+|||+ .++++++++. +|...|+++ +++++|+++++-+
T Consensus 225 ~~~~l~s~---~~dg~i~iwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 225 ECCVLILG---TTRGIIDIWDI--RFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp TSCEEEEE---ETTSCEEEEET--TTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES
T ss_pred CCCEEEEE---cCCCeEEEEEc--CCccEEEEEecCCCCceEEEEeccccCCCccEEEEEc
Confidence 89999997 48999999998 4577788886 788899999 5566787777643
No 98
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.70 E-value=8.9e-17 Score=202.76 Aligned_cols=145 Identities=10% Similarity=0.076 Sum_probs=113.7
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.|++|+|||||++||++|.||+|++||.. + ++.++ . |.++.+ ...|.+|+|||||++||+|+.||+|+|||+
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~-~-~l~~l---~-~~~~~~--~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDN-K-MLTNL---D-SKGNLS--SRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETT-E-EEEEC---C-CSSCST--TTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCC-c-eeeec---c-CCCccc--cccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 56999999999999999999999999953 3 55554 3 432111 246999999999999999999999999999
Q ss_pred CCCCccCcc----cceee----eecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc---eEEEE-eecCc
Q 000080 2301 EVGGRSNVR----PMESC----LCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS---RASIT-CHEGL 2368 (2389)
Q Consensus 2301 ~tggrs~~k----~l~tl----~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~---v~sL~-GH~~~ 2368 (2389)
.++. ... .+.++ .||...|.+|+|+| || ||++ +.|++||+||+. .++. .++|. +|...
T Consensus 159 ~~~~--l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laas---s~D~tVrlWd~~--~~~~~~~~~tL~~~h~~~ 228 (588)
T 2j04_A 159 RKNS--ENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAA---LSNNSVFSMTVS--ASSHQPVSRMIQNASRRK 228 (588)
T ss_dssp CCCT--TTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEE---ETTCCEEEECCC--SSSSCCCEEEEECCCSSC
T ss_pred CCCc--cccccceeeeeeecccccccccEEEEEEcC-Cc--EEEE---eCCCeEEEEECC--CCccccceeeecccccCc
Confidence 9752 101 24565 67889999999999 88 5555 379999999983 3332 46784 89999
Q ss_pred EEEEeecccchhhhccc
Q 000080 2369 YDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2369 V~svA~~~~~~~~~s~~ 2385 (2389)
|.+++++ |+.++|-|
T Consensus 229 V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 229 ITDLKIV--DYKVVLTC 243 (588)
T ss_dssp CCCEEEE--TTEEEEEC
T ss_pred EEEEEEE--CCEEEEEe
Confidence 9999999 67777655
No 99
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.70 E-value=3.3e-17 Score=196.52 Aligned_cols=150 Identities=13% Similarity=0.081 Sum_probs=114.9
Q ss_pred cccc-ccccccceeeccccccccccccccC--CCCcC-----ceeEEEEEEcCCCCeE------------EEEeCCCcEE
Q 000080 2185 AFGI-PGYAGIGASALGWETQDDFEDYVDP--PATVE-----NISTRAFSSHPLRPFF------------LVGSSNTHIY 2244 (2389)
Q Consensus 2185 ~~~~-~g~~~~~Asg~~~d~~~~~~~~~d~--~atv~-----ni~VrsVAFsPdG~~L------------ASGS~DgTIR 2244 (2389)
+|.. +|....+|+| ++|.+.++|+.... ..++. ...|.+++|||||+++ +||+.|++||
T Consensus 185 ~fs~~~g~~~~LaSg-S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIk 263 (356)
T 2w18_A 185 TFAEVQGMQEALLGT-TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLI 263 (356)
T ss_dssp EEEEEETSTTEEEEE-ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEE
T ss_pred EeeccCCCCceEEEe-cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEE
Confidence 5555 7888999999 99999999987522 23332 1245778999999986 7799999999
Q ss_pred EeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCee-E
Q 000080 2245 LWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAM-D 2323 (2389)
Q Consensus 2245 LWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~-s 2323 (2389)
+||..+|+++.++... . |.||...+.+..++ |..+|+|+.|+||||||++++ +.+.++.+|...+. .
T Consensus 264 lWd~~tgk~l~v~~~~----~-p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tG-----k~l~tL~gH~~~vvs~ 331 (356)
T 2w18_A 264 VINPKTTLSVGVMLYC----L-PPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLG-----QCTALLPPVSDQHWSF 331 (356)
T ss_dssp EEETTTTEEEEEEEEC----C-CTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTC-----SEEEEECCC--CCCCE
T ss_pred EEECCCCEEEEEEEee----c-cCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCC-----cEEEEecCCCCCeEEE
Confidence 9999999988775310 1 23666666555555 999999999999999999997 47788999988766 5
Q ss_pred EEEecCCCCEEEEeecCCCCCeEEEeeC
Q 000080 2324 VSYITSSGSVIAAAGHSSNGINVVVWDT 2351 (2389)
Q Consensus 2324 VAFSP~DGslLASAG~sS~D~TVrLWD~ 2351 (2389)
++|+| ||++|||| |.|+||||||+
T Consensus 332 vafSP-DG~~LaSG---S~D~TIklWd~ 355 (356)
T 2w18_A 332 VKWSG-TDSHLLAG---QKDGNIFVYHY 355 (356)
T ss_dssp EEECS-SSSEEEEE---CTTSCEEEEEE
T ss_pred EEECC-CCCEEEEE---ECCCcEEEecC
Confidence 89999 99999996 69999999995
No 100
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.70 E-value=1.8e-16 Score=187.96 Aligned_cols=173 Identities=12% Similarity=0.119 Sum_probs=137.8
Q ss_pred ccceeeccccccccccccccC--CCCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDP--PATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPP 2268 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~--~atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~ 2268 (2389)
+..|+| +.|...++|+.... ..++ +.-.|.+++|+|++ +|++|+.||+|++||+.+++++.++.
T Consensus 133 ~~l~sg-s~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~---------- 200 (464)
T 3v7d_B 133 NYVITG-ADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFE---------- 200 (464)
T ss_dssp TEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEEC----------
T ss_pred CEEEEE-cCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEEC----------
Confidence 356666 66777777765321 1111 22367999999998 99999999999999999999988874
Q ss_pred CCCCCEEEEEEC--CCCCEEEEEeCCCcEEEeeCCCCCccC------------------cccceeeeecCCCeeEEEEec
Q 000080 2269 YALASISALQFD--HYGHRFASAALDGTVCTWQLEVGGRSN------------------VRPMESCLCFSSHAMDVSYIT 2328 (2389)
Q Consensus 2269 GH~~~V~sVaFS--PDG~~LASgS~DgTVkLWDl~tggrs~------------------~k~l~tl~gHs~~V~sVAFSP 2328 (2389)
+|.+.|++++|+ |+|+.|++|+.||+|++||++++.... ...+..+.+|...|.++ ++
T Consensus 201 ~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 278 (464)
T 3v7d_B 201 GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SG 278 (464)
T ss_dssp CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EE
T ss_pred CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cC
Confidence 467899999998 688999999999999999999763100 00155678899988877 55
Q ss_pred CCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2329 SSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2329 ~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+|++|+++ +.|++|++||+ .+++++..+.+|.+.|.+++++++|++.++-+
T Consensus 279 -~~~~l~~~---~~d~~i~vwd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 279 -HGNIVVSG---SYDNTLIVWDV--AQMKCLYILSGHTDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp -ETTEEEEE---ETTSCEEEEET--TTTEEEEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred -CCCEEEEE---eCCCeEEEEEC--CCCcEEEEecCCCCCEEEEEEcCCCCEEEEEe
Confidence 67999997 48999999998 46788999999999999999999999887654
No 101
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.69 E-value=3.6e-16 Score=175.23 Aligned_cols=174 Identities=14% Similarity=0.109 Sum_probs=143.5
Q ss_pred cccceeeccccccccccccccCCCC-------cC--ceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDPPAT-------VE--NISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPA 2262 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~~at-------v~--ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~g 2262 (2389)
..++|+| +.|.+.++|++...... +. .-.|.+++|+|+|++|++|+.|++|++|+...+.......
T Consensus 51 ~~~l~S~-s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~---- 125 (340)
T 4aow_A 51 PDMILSA-SRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV---- 125 (340)
T ss_dssp TTEEEEE-ETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE----
T ss_pred CCEEEEE-cCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec----
Confidence 4688999 99999999987533211 11 2367999999999999999999999999998887766653
Q ss_pred CCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCC-CCEEEEeecCC
Q 000080 2263 ANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSS-GSVIAAAGHSS 2341 (2389)
Q Consensus 2263 h~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~D-GslLASAG~sS 2341 (2389)
.+...+..+.++|+++.|++|+.|+.+++||+.... .......+|...+..++|+++. ..+++++ +
T Consensus 126 ------~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~---~ 192 (340)
T 4aow_A 126 ------GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC----KYTVQDESHSEWVSCVRFSPNSSNPIIVSC---G 192 (340)
T ss_dssp ------CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE----EEEECSSSCSSCEEEEEECSCSSSCEEEEE---E
T ss_pred ------CCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc----eEEEEeccccCcccceEEccCCCCcEEEEE---c
Confidence 244779999999999999999999999999998642 3455677899999999999842 3467775 4
Q ss_pred CCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2342 NGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2342 ~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
.|++|++||+ .+++++..+.+|++.|++++++|+|+++++-+
T Consensus 193 ~d~~i~i~d~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 193 WDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp TTSCEEEEET--TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEEC--CCCceeeEecCCCCcEEEEEECCCCCEEEEEe
Confidence 8999999998 56777899999999999999999999887643
No 102
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.69 E-value=2.2e-17 Score=194.19 Aligned_cols=173 Identities=8% Similarity=0.074 Sum_probs=133.0
Q ss_pred ccccceeeccccccccccccccC--CCCc----CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCC
Q 000080 2191 YAGIGASALGWETQDDFEDYVDP--PATV----ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAAN 2264 (2389)
Q Consensus 2191 ~~~~~Asg~~~d~~~~~~~~~d~--~atv----~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~ 2264 (2389)
...+.++| +.|...++|+.... ..++ +.-.|.+++|+|++++|++|+.||+|++||+++++++.++..
T Consensus 181 ~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----- 254 (437)
T 3gre_A 181 EKSLLVAL-TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF----- 254 (437)
T ss_dssp SCEEEEEE-ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC-----
T ss_pred CCCEEEEE-eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec-----
Confidence 34566777 77777788876422 1111 234679999999999999999999999999999999988741
Q ss_pred CCCCCCCCCEEEE----EECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeee------------------------e
Q 000080 2265 VPPPYALASISAL----QFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCL------------------------C 2316 (2389)
Q Consensus 2265 ~p~~GH~~~V~sV----aFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~------------------------g 2316 (2389)
+|...|++| +|+|||+.||+|+.||+|++||++++. ....+. +
T Consensus 255 ----~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 255 ----GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH-----CQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp ----TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE-----EEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred ----CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc-----EEEEEEcCCCCCccceecccccccccceecc
Confidence 345789999 555679999999999999999999862 233333 3
Q ss_pred --cCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEe------------------------------
Q 000080 2317 --FSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITC------------------------------ 2364 (2389)
Q Consensus 2317 --Hs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~G------------------------------ 2364 (2389)
|...|++++|++ |++|+|+ +.|++|++||+ .++++++.+.+
T Consensus 326 ~~~~~~v~~l~~~~--~~~l~s~---~~d~~i~~wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (437)
T 3gre_A 326 IRSLNALSTISVSN--DKILLTD---EATSSIVMFSL--NELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTH 398 (437)
T ss_dssp CCSGGGGCCEEEET--TEEEEEE---GGGTEEEEEET--TCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-----
T ss_pred cccCCceEEEEECC--ceEEEec---CCCCeEEEEEC--CCcccceEEecccccCceEEEEEeecceEEEEEeccccccc
Confidence 667788999994 6899987 48999999998 46677777776
Q ss_pred -------ecCcEEEEeeccc--chhhhccc
Q 000080 2365 -------HEGLYDLFLPLKL--LNFALSKC 2385 (2389)
Q Consensus 2365 -------H~~~V~svA~~~~--~~~~~s~~ 2385 (2389)
|.+.|++++.+++ +..++|-.
T Consensus 399 ~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~ 428 (437)
T 3gre_A 399 SVDDSLYHHDIINSISTCEVDETPLLVACD 428 (437)
T ss_dssp --------CCCEEEEEEEESSSSEEEEEEE
T ss_pred ccCcccccccceeeEeeeccCCceEEEEEc
Confidence 8999999999988 65666543
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.69 E-value=4.5e-16 Score=186.00 Aligned_cols=171 Identities=9% Similarity=-0.004 Sum_probs=137.8
Q ss_pred ceeeccccccccccccc--c--CCCCcC----ceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceee-EecccCCCCC
Q 000080 2195 GASALGWETQDDFEDYV--D--PPATVE----NISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATA-TYGVLPAANV 2265 (2389)
Q Consensus 2195 ~Asg~~~d~~~~~~~~~--d--~~atv~----ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~-Tl~vl~gh~~ 2265 (2389)
.|++ +.|...++|+.. . ....+. ...|.+++|+|+|++|++|+.|++|++||+.+++... ....+
T Consensus 118 ~~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~----- 191 (450)
T 2vdu_B 118 IACA-DSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPI----- 191 (450)
T ss_dssp EEEE-GGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCS-----
T ss_pred EEEE-CCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceee-----
Confidence 4777 778888888874 1 111121 1357999999999999999999999999998887554 11111
Q ss_pred CCCCCCCCEEEEEECCC---CCEEEEEeCCCcEEEeeCCCCCccCccccee-eeecCCCeeEEEEecCCCCEEEEeecCC
Q 000080 2266 PPPYALASISALQFDHY---GHRFASAALDGTVCTWQLEVGGRSNVRPMES-CLCFSSHAMDVSYITSSGSVIAAAGHSS 2341 (2389)
Q Consensus 2266 p~~GH~~~V~sVaFSPD---G~~LASgS~DgTVkLWDl~tggrs~~k~l~t-l~gHs~~V~sVAFSP~DGslLASAG~sS 2341 (2389)
.+|...|++|+|+|| |++|++|+.|++|++||++++ +.+.. +.+|...|.+++|+ +|++||++ +
T Consensus 192 --~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~-----~~~~~~~~~h~~~v~~~~~s--d~~~l~s~---~ 259 (450)
T 2vdu_B 192 --LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC-----FIVDKWLFGHKHFVSSICCG--KDYLLLSA---G 259 (450)
T ss_dssp --EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT-----TCEEEECCCCSSCEEEEEEC--STTEEEEE---E
T ss_pred --ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC-----ceeeeeecCCCCceEEEEEC--CCCEEEEE---e
Confidence 246789999999999 999999999999999999986 34555 66899999999999 78999997 4
Q ss_pred CCCeEEEeeCCCCCCCceEEEEee-------------------------cCcEEEEeecccchhhhccc
Q 000080 2342 NGINVVVWDTLAPPTSSRASITCH-------------------------EGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2342 ~D~TVrLWD~l~~tg~~v~sL~GH-------------------------~~~V~svA~~~~~~~~~s~~ 2385 (2389)
.|++|+|||+ .++++++.+..| ...|.+++++|+|+++++-|
T Consensus 260 ~d~~v~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 260 GDDKIFAWDW--KTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp SSSEEEEEET--TTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred CCCeEEEEEC--CCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 8999999998 567888888744 36789999999999988766
No 104
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.69 E-value=2.9e-16 Score=176.76 Aligned_cols=171 Identities=10% Similarity=0.091 Sum_probs=132.0
Q ss_pred ccceeeccc---cccccccccccCCCC-c----CceeEEEEEEcCC---CCeEEEEeCCCcEEEeecCCCc-eeeEeccc
Q 000080 2193 GIGASALGW---ETQDDFEDYVDPPAT-V----ENISTRAFSSHPL---RPFFLVGSSNTHIYLWEFGKDK-ATATYGVL 2260 (2389)
Q Consensus 2193 ~~~Asg~~~---d~~~~~~~~~d~~at-v----~ni~VrsVAFsPd---G~~LASGS~DgTIRLWDl~tGk-~l~Tl~vl 2260 (2389)
.+.|.| ++ |...++|+....... . +.-.|.+++|+|+ |++|++|+.|++|++||+.+++ .+.++.
T Consensus 32 ~l~~~~-s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-- 108 (357)
T 3i2n_A 32 KFVTMG-NFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVK-- 108 (357)
T ss_dssp EEEEEE-C--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEEC--
T ss_pred eEEEec-CccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEE--
Confidence 345556 55 777778876422111 1 1236799999999 7999999999999999999888 777763
Q ss_pred CCCCCCCCCCCCCEEEE------EECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCC----CeeEEE----E
Q 000080 2261 PAANVPPPYALASISAL------QFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSS----HAMDVS----Y 2326 (2389)
Q Consensus 2261 ~gh~~p~~GH~~~V~sV------aFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~----~V~sVA----F 2326 (2389)
+|...|+++ +|+|+|+.|++|+.||+|++||++++. .+...+..|.+ .|.+++ |
T Consensus 109 --------~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 109 --------GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD----DPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp --------CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS----SCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred --------ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC----CcceeccccCCCCCCceEEEEEEecc
Confidence 467889999 568999999999999999999999863 35666666655 889998 6
Q ss_pred ecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecc---cchhhhccc
Q 000080 2327 ITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLK---LLNFALSKC 2385 (2389)
Q Consensus 2327 SP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~---~~~~~~s~~ 2385 (2389)
+| +|++|+++ +.|++|++||+. +++ ......|.+.|.+++++| ++++.++-+
T Consensus 177 ~~-~~~~l~~~---~~d~~i~i~d~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~ 231 (357)
T 3i2n_A 177 NQ-EERVVCAG---YDNGDIKLFDLR--NMA-LRWETNIKNGVCSLEFDRKDISMNKLVATS 231 (357)
T ss_dssp C--CCCEEEEE---ETTSEEEEEETT--TTE-EEEEEECSSCEEEEEESCSSSSCCEEEEEE
T ss_pred CC-CCCEEEEE---ccCCeEEEEECc--cCc-eeeecCCCCceEEEEcCCCCCCCCEEEEEC
Confidence 67 99999997 489999999983 333 455678999999999999 888877643
No 105
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.69 E-value=1.4e-16 Score=183.17 Aligned_cols=151 Identities=17% Similarity=0.153 Sum_probs=124.5
Q ss_pred eeEEEEEEc----CCCCe-EEEEeCCCcEEEeecCC------Cceee-----EecccCCCCCCCCCCCCCEEEEEECCCC
Q 000080 2220 ISTRAFSSH----PLRPF-FLVGSSNTHIYLWEFGK------DKATA-----TYGVLPAANVPPPYALASISALQFDHYG 2283 (2389)
Q Consensus 2220 i~VrsVAFs----PdG~~-LASGS~DgTIRLWDl~t------Gk~l~-----Tl~vl~gh~~p~~GH~~~V~sVaFSPDG 2283 (2389)
-.|.+++|+ |++++ |++|+.|++|++||+.+ ++.+. ++. ++...+..|...|++++|+|+|
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~ 198 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQ---GTVESPMTPSQFATSVDISERG 198 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEE---EEECCSSSSCCCCCEEEECTTS
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceee---eeeccccCCCCCceEEEECCCc
Confidence 457999999 99999 99999999999999988 76665 552 1000001256889999999999
Q ss_pred CEEEEEeCCCcEEEeeCCCCCccCcccceeeee---c---CCCeeEEEEecCCCCEEEEeecCCCC---CeEEEeeCCCC
Q 000080 2284 HRFASAALDGTVCTWQLEVGGRSNVRPMESCLC---F---SSHAMDVSYITSSGSVIAAAGHSSNG---INVVVWDTLAP 2354 (2389)
Q Consensus 2284 ~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~g---H---s~~V~sVAFSP~DGslLASAG~sS~D---~TVrLWD~l~~ 2354 (2389)
.|++|+.||+|++||++++ +++..+.+ | ...|.+++|+| +|++||+++ .| ++|+|||+ .
T Consensus 199 -~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~---~d~~~g~i~i~d~--~ 266 (397)
T 1sq9_A 199 -LIATGFNNGTVQISELSTL-----RPLYNFESQHSMINNSNSIRSVKFSP-QGSLLAIAH---DSNSFGCITLYET--E 266 (397)
T ss_dssp -EEEEECTTSEEEEEETTTT-----EEEEEEECCC---CCCCCEEEEEECS-STTEEEEEE---EETTEEEEEEEET--T
T ss_pred -eEEEEeCCCcEEEEECCCC-----ceeEEEeccccccccCCccceEEECC-CCCEEEEEe---cCCCCceEEEEEC--C
Confidence 9999999999999999975 46777888 9 99999999999 899999974 77 99999998 4
Q ss_pred CCCceEEEEe-------------ecCcEEEEeecccchhhhccc
Q 000080 2355 PTSSRASITC-------------HEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2355 tg~~v~sL~G-------------H~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+++.+..+.+ |.+.|.+++++|+|++.++-+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 310 (397)
T 1sq9_A 267 FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 310 (397)
T ss_dssp TCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred CCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe
Confidence 6788999999 999999999999999887754
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.69 E-value=5.7e-16 Score=184.73 Aligned_cols=144 Identities=15% Similarity=0.195 Sum_probs=121.6
Q ss_pred eEEEEEEcCCCC-eEEEEeCCCcEEEeecCCCce-------eeEecccCCCCCCCCCCCCCEEEEEECC-CCCEEEEEeC
Q 000080 2221 STRAFSSHPLRP-FFLVGSSNTHIYLWEFGKDKA-------TATYGVLPAANVPPPYALASISALQFDH-YGHRFASAAL 2291 (2389)
Q Consensus 2221 ~VrsVAFsPdG~-~LASGS~DgTIRLWDl~tGk~-------l~Tl~vl~gh~~p~~GH~~~V~sVaFSP-DG~~LASgS~ 2291 (2389)
.|.+++|+|+++ +|++|+.||+|++||+.++.. ...+ .+|...|.+|+|+| +++.||+++.
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~----------~~h~~~v~~v~~~p~~~~~l~s~~~ 252 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIF----------TGHTAVVEDVAWHLLHESLFGSVAD 252 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEE----------CCCSSCEEEEEECSSCTTEEEEEET
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceee----------cCCCCCEeeeEEeCCCCCEEEEEeC
Confidence 568899999999 999999999999999987432 2222 25678999999999 6799999999
Q ss_pred CCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCC-EEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEE
Q 000080 2292 DGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGS-VIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYD 2370 (2389)
Q Consensus 2292 DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGs-lLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~ 2370 (2389)
||+|++||++++. ..+++..+.+|...|++++|+| +|. +||++ +.|++|+|||+. ..++.++.+.+|.+.|+
T Consensus 253 dg~i~i~d~~~~~--~~~~~~~~~~~~~~v~~i~~~p-~~~~~l~tg---~~dg~v~vwd~~-~~~~~~~~~~~h~~~v~ 325 (430)
T 2xyi_A 253 DQKLMIWDTRNNN--TSKPSHTVDAHTAEVNCLSFNP-YSEFILATG---SADKTVALWDLR-NLKLKLHSFESHKDEIF 325 (430)
T ss_dssp TSEEEEEETTCSC--SSSCSEEEECCSSCEEEEEECS-SCTTEEEEE---ETTSEEEEEETT-CTTSCSEEEECCSSCEE
T ss_pred CCeEEEEECCCCC--CCcceeEeecCCCCeEEEEeCC-CCCCEEEEE---eCCCeEEEEeCC-CCCCCeEEeecCCCCEE
Confidence 9999999999863 2356778889999999999999 666 78886 489999999984 22466899999999999
Q ss_pred EEeecccchhh
Q 000080 2371 LFLPLKLLNFA 2381 (2389)
Q Consensus 2371 svA~~~~~~~~ 2381 (2389)
+++++|+|++.
T Consensus 326 ~i~~sp~~~~~ 336 (430)
T 2xyi_A 326 QVQWSPHNETI 336 (430)
T ss_dssp EEEECSSCTTE
T ss_pred EEEECCCCCCE
Confidence 99999999763
No 107
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.69 E-value=2e-16 Score=199.80 Aligned_cols=173 Identities=13% Similarity=0.121 Sum_probs=140.0
Q ss_pred ccceeeccccccccccccccC--CCC--cCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDP--PAT--VENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPP 2268 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~--~at--v~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~ 2268 (2389)
...|.+ +.+...++|+.... ..+ .+..+|++++|+|+|++||+|+.||+|++||+.+|+.+.++.
T Consensus 26 ~~la~~-~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~---------- 94 (814)
T 3mkq_A 26 PWVLTT-LYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE---------- 94 (814)
T ss_dssp SEEEEE-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE----------
T ss_pred CEEEEE-eCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe----------
Confidence 345555 45556666665311 111 123467999999999999999999999999999999988874
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEE
Q 000080 2269 YALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVV 2348 (2389)
Q Consensus 2269 GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrL 2348 (2389)
+|.+.|++++|+|||++||+|+.||+|++||++++. .....+.+|...|.+++|+|.+|+.|+++ +.|++|++
T Consensus 95 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~----~~~~~~~~~~~~v~~~~~~p~~~~~l~~~---~~dg~v~v 167 (814)
T 3mkq_A 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW----ALEQTFEGHEHFVMCVAFNPKDPSTFASG---CLDRTVKV 167 (814)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS----EEEEEEECCSSCEEEEEEETTEEEEEEEE---ETTSEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc----eEEEEEcCCCCcEEEEEEEcCCCCEEEEE---eCCCeEEE
Confidence 467889999999999999999999999999998763 45677889999999999999778899987 48999999
Q ss_pred eeCCCCCCCceEEEEeec-CcEEEEeecc--cchhhhccc
Q 000080 2349 WDTLAPPTSSRASITCHE-GLYDLFLPLK--LLNFALSKC 2385 (2389)
Q Consensus 2349 WD~l~~tg~~v~sL~GH~-~~V~svA~~~--~~~~~~s~~ 2385 (2389)
||+ .+++....+..|. ..+.+++++| +|+++++-+
T Consensus 168 wd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 168 WSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp EET--TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred EEC--CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 998 4566677776665 8999999998 888877643
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.68 E-value=1.1e-15 Score=174.86 Aligned_cols=173 Identities=14% Similarity=0.099 Sum_probs=138.0
Q ss_pred ccccceeeccccccccccccccCCC--Cc---------------CceeEEEEEEcC-CCCeEEEEeCCCcEEEeecCCCc
Q 000080 2191 YAGIGASALGWETQDDFEDYVDPPA--TV---------------ENISTRAFSSHP-LRPFFLVGSSNTHIYLWEFGKDK 2252 (2389)
Q Consensus 2191 ~~~~~Asg~~~d~~~~~~~~~d~~a--tv---------------~ni~VrsVAFsP-dG~~LASGS~DgTIRLWDl~tGk 2252 (2389)
....+|+| +.|...++|+...... .. +.-.|.+++|+| ++++|++|+.|++|++||+.+++
T Consensus 55 ~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 133 (408)
T 4a11_B 55 EGRYMLSG-GSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ 133 (408)
T ss_dssp TCCEEEEE-ETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE
T ss_pred CCCEEEEE-cCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc
Confidence 34556677 6777777877642211 11 334679999999 78899999999999999999999
Q ss_pred eeeEecccCCCCCCCCCCCCCEEEEEECCC---CCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecC
Q 000080 2253 ATATYGVLPAANVPPPYALASISALQFDHY---GHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITS 2329 (2389)
Q Consensus 2253 ~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD---G~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~ 2329 (2389)
.+..+. +...+.+++|+|+ ++.+++|+.||+|++||++++ +.+..+.+|...|.+++|+|
T Consensus 134 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-----~~~~~~~~~~~~v~~~~~~~- 196 (408)
T 4a11_B 134 TADVFN-----------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG-----SCSHILQGHRQEILAVSWSP- 196 (408)
T ss_dssp EEEEEE-----------CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS-----CCCEEECCCCSCEEEEEECS-
T ss_pred cceecc-----------CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc-----ceeeeecCCCCcEEEEEECC-
Confidence 888774 2366999999985 559999999999999999986 46778889999999999999
Q ss_pred CCC-EEEEeecCCCCCeEEEeeCCCCCCCceEEE---------------EeecCcEEEEeecccchhhhccc
Q 000080 2330 SGS-VIAAAGHSSNGINVVVWDTLAPPTSSRASI---------------TCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2330 DGs-lLASAG~sS~D~TVrLWD~l~~tg~~v~sL---------------~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+|+ +||++ +.|++|++||+.. ...++..+ .+|.+.|.+++++|+|++.++-+
T Consensus 197 ~~~~ll~~~---~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 197 RYDYILATA---SADSRVKLWDVRR-ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp SCTTEEEEE---ETTSCEEEEETTC-SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcEEEEE---cCCCcEEEEECCC-CCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec
Confidence 777 68886 4899999999842 22345555 68999999999999999877643
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.68 E-value=2.9e-16 Score=190.21 Aligned_cols=142 Identities=13% Similarity=0.127 Sum_probs=121.8
Q ss_pred eEEEEEEcCCCCeEEEEeC-CCcEEEeecCCCcee-eEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEe
Q 000080 2221 STRAFSSHPLRPFFLVGSS-NTHIYLWEFGKDKAT-ATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTW 2298 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~-DgTIRLWDl~tGk~l-~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLW 2298 (2389)
.+.+++|+ +++|++|+. |++|++||+.+++.. ..+ .+|...|++++|+|||++||+|+.||+|++|
T Consensus 448 ~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~----------~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw 515 (615)
T 1pgu_A 448 PGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLK----------TPLRAKPSYISISPSETYIAAGDVMGKILLY 515 (615)
T ss_dssp CEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECS----------SCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CceEEEEc--CCEEEEeecCCCeEEEEECCCcccccccc----------CCccCceEEEEECCCCCEEEEcCCCCeEEEe
Confidence 46778888 889999999 999999999877654 222 2467899999999999999999999999999
Q ss_pred eCCCCCccCcccceeeee-cCCCeeEEEEecC---------CCCEEEEeecCCCCCeEEEeeCCCCCC-CceEEEEeecC
Q 000080 2299 QLEVGGRSNVRPMESCLC-FSSHAMDVSYITS---------SGSVIAAAGHSSNGINVVVWDTLAPPT-SSRASITCHEG 2367 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~g-Hs~~V~sVAFSP~---------DGslLASAG~sS~D~TVrLWD~l~~tg-~~v~sL~GH~~ 2367 (2389)
|++++ +++..+.+ |...|.+++|+|. +|++||++ +.|++|+|||+ .++ ++++.+.+|..
T Consensus 516 ~~~~~-----~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~---~~dg~i~iw~~--~~~~~~~~~~~~h~~ 585 (615)
T 1pgu_A 516 DLQSR-----EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG---SLDTNIFIYSV--KRPMKIIKALNAHKD 585 (615)
T ss_dssp ETTTT-----EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEE---ETTSCEEEEES--SCTTCCEEETTSSTT
T ss_pred eCCCC-----cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEE---cCCCcEEEEEC--CCCceechhhhcCcc
Confidence 99986 45677777 9999999999984 78999997 48999999998 344 67899999999
Q ss_pred cEEEEeecccchhhhccc
Q 000080 2368 LYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2368 ~V~svA~~~~~~~~~s~~ 2385 (2389)
.|++++++|+|+ .++-+
T Consensus 586 ~v~~l~~s~~~~-l~s~~ 602 (615)
T 1pgu_A 586 GVNNLLWETPST-LVSSG 602 (615)
T ss_dssp CEEEEEEEETTE-EEEEE
T ss_pred ceEEEEEcCCCC-eEEec
Confidence 999999999999 66543
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.67 E-value=5.4e-16 Score=174.42 Aligned_cols=175 Identities=11% Similarity=0.105 Sum_probs=135.2
Q ss_pred cccceeecccccccccccccc-----------CCCCc-CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCC-CceeeEec
Q 000080 2192 AGIGASALGWETQDDFEDYVD-----------PPATV-ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGK-DKATATYG 2258 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d-----------~~atv-~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~t-Gk~l~Tl~ 2258 (2389)
..+.+++ ++|...++|+... +..++ ....|.+++|+|++ +++|+.|++|++||+.+ ++......
T Consensus 112 ~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~ 188 (342)
T 1yfq_A 112 DDKLIAA-SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIE 188 (342)
T ss_dssp TTEEEEE-ETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEE
T ss_pred CCEEEEE-cCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceee
Confidence 3455666 6666777776532 12222 22467999999998 99999999999999988 65432211
Q ss_pred ccCCCCCCCCCCCCCEEEEEECC-CCCEEEEEeCCCcEEEeeCCCCCc-cCcccceeeeecCC---------CeeEEEEe
Q 000080 2259 VLPAANVPPPYALASISALQFDH-YGHRFASAALDGTVCTWQLEVGGR-SNVRPMESCLCFSS---------HAMDVSYI 2327 (2389)
Q Consensus 2259 vl~gh~~p~~GH~~~V~sVaFSP-DG~~LASgS~DgTVkLWDl~tggr-s~~k~l~tl~gHs~---------~V~sVAFS 2327 (2389)
. ..|...|++|+|+| +|+.||+|+.||+|++||++.++. ...++...+.+|.. .|.+++|+
T Consensus 189 ~--------~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 260 (342)
T 1yfq_A 189 E--------SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS 260 (342)
T ss_dssp E--------CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEEC
T ss_pred e--------cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEc
Confidence 1 13557899999999 999999999999999999987510 00146677788865 99999999
Q ss_pred cCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEee-cCcEEEEeecccchhhhccc
Q 000080 2328 TSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCH-EGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2328 P~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH-~~~V~svA~~~~~~~~~s~~ 2385 (2389)
| +|++||++ +.|++|++||+ .+++.+..+.+| .+.|++++ ++|++.++-+
T Consensus 261 ~-~~~~l~~~---~~dg~i~vwd~--~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s 311 (342)
T 1yfq_A 261 P-RHKFLYTA---GSDGIISCWNL--QTRKKIKNFAKFNEDSVVKIA--CSDNILCLAT 311 (342)
T ss_dssp T-TTCCEEEE---ETTSCEEEEET--TTTEEEEECCCCSSSEEEEEE--ECSSEEEEEE
T ss_pred C-CCCEEEEe---cCCceEEEEcC--ccHhHhhhhhcccCCCceEec--CCCCeEEEEe
Confidence 9 99999997 48999999998 467788999999 99999999 9999887654
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.66 E-value=6.1e-16 Score=180.66 Aligned_cols=162 Identities=10% Similarity=0.058 Sum_probs=117.1
Q ss_pred cccccccccccC---CCCcCceeEEEEEEcCCCCeEEE--EeCCCcEEEeecCCCc----------------eeeEeccc
Q 000080 2202 ETQDDFEDYVDP---PATVENISTRAFSSHPLRPFFLV--GSSNTHIYLWEFGKDK----------------ATATYGVL 2260 (2389)
Q Consensus 2202 d~~~~~~~~~d~---~atv~ni~VrsVAFsPdG~~LAS--GS~DgTIRLWDl~tGk----------------~l~Tl~vl 2260 (2389)
+...++|++.+. ..++.. +...++++| .++|. |+.||+|++||+.+++ ++.++
T Consensus 118 ~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~--- 191 (355)
T 3vu4_A 118 GDVISVFKFGNPWKRITDDIR-FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI--- 191 (355)
T ss_dssp TTEEEEEESSTTCCBSSCCEE-EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEE---
T ss_pred cCEEEEEECCCCceeeEEecc-CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE---
Confidence 455666666433 222222 345567888 55555 7899999999998876 14444
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCc-EEEeeCCCCCccCcccceeee-e-cCCCeeEEEEecCCCCEEEEe
Q 000080 2261 PAANVPPPYALASISALQFDHYGHRFASAALDGT-VCTWQLEVGGRSNVRPMESCL-C-FSSHAMDVSYITSSGSVIAAA 2337 (2389)
Q Consensus 2261 ~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgT-VkLWDl~tggrs~~k~l~tl~-g-Hs~~V~sVAFSP~DGslLASA 2337 (2389)
.+|.+.|++|+|+|||++||||+.||+ |++||++++ +++.++. + |...|++++|+| ||++||++
T Consensus 192 -------~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~-----~~~~~~~~g~h~~~v~~~~~s~-~~~~l~s~ 258 (355)
T 3vu4_A 192 -------KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG-----VLVREFRRGLDRADVVDMKWST-DGSKLAVV 258 (355)
T ss_dssp -------CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC-----CEEEEEECTTCCSCEEEEEECT-TSCEEEEE
T ss_pred -------EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC-----cEEEEEEcCCCCCcEEEEEECC-CCCEEEEE
Confidence 257799999999999999999999999 999999987 4667777 6 999999999999 99999997
Q ss_pred ecCCCCCeEEEeeCCCCCCCceEEEEe---------------------ecCcEEEEeecccchhhhccc
Q 000080 2338 GHSSNGINVVVWDTLAPPTSSRASITC---------------------HEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2338 G~sS~D~TVrLWD~l~~tg~~v~sL~G---------------------H~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+.|++|+|||+..........+.+ +......+|.+++|+.++.-|
T Consensus 259 ---s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~ 324 (355)
T 3vu4_A 259 ---SDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWP 324 (355)
T ss_dssp ---ETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEET
T ss_pred ---ECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEe
Confidence 489999999984322222222211 122236788999988776654
No 112
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.66 E-value=7.2e-16 Score=182.76 Aligned_cols=175 Identities=17% Similarity=0.200 Sum_probs=134.1
Q ss_pred cceeeccccccccccccccC--CCCc--CceeEEEEEEc--CCCCeEEEEeCCCcEEEeecCCCceeeEeccc-------
Q 000080 2194 IGASALGWETQDDFEDYVDP--PATV--ENISTRAFSSH--PLRPFFLVGSSNTHIYLWEFGKDKATATYGVL------- 2260 (2389)
Q Consensus 2194 ~~Asg~~~d~~~~~~~~~d~--~atv--~ni~VrsVAFs--PdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl------- 2260 (2389)
..++| +.|.+.++|+.... ..+. +.-.|.+++|+ |++++|++|+.|++|++||+.+++........
T Consensus 175 ~l~s~-s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 175 ILVSG-STDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp EEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred EEEEE-eCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence 66777 77888888876422 1111 22356888888 68899999999999999999887643221000
Q ss_pred --CCCC----CCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEE
Q 000080 2261 --PAAN----VPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVI 2334 (2389)
Q Consensus 2261 --~gh~----~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslL 2334 (2389)
+..+ ....||...|.++ +|+|+.|++|+.||+|++||++++ +++..+.+|...|.+++|+| +|++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~-----~~~~~~~~~~~~v~~~~~~~-~~~~l 325 (464)
T 3v7d_B 254 HTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM-----KCLYILSGHTDRIYSTIYDH-ERKRC 325 (464)
T ss_dssp SCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT-----EEEEEECCCSSCEEEEEEET-TTTEE
T ss_pred eccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC-----cEEEEecCCCCCEEEEEEcC-CCCEE
Confidence 0000 0013567888877 789999999999999999999986 57788899999999999999 99999
Q ss_pred EEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhcc
Q 000080 2335 AAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2335 ASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
|++ +.|++|++||+ .++++++.+.+|.+.|.+++++ +++.++-
T Consensus 326 ~sg---~~dg~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~ 368 (464)
T 3v7d_B 326 ISA---SMDTTIRIWDL--ENGELMYTLQGHTALVGLLRLS--DKFLVSA 368 (464)
T ss_dssp EEE---ETTSCEEEEET--TTTEEEEEECCCSSCEEEEEEC--SSEEEEE
T ss_pred EEE---eCCCcEEEEEC--CCCcEEEEEeCCCCcEEEEEEc--CCEEEEE
Confidence 997 48999999998 5678899999999999999997 4565553
No 113
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.1e-15 Score=168.80 Aligned_cols=142 Identities=12% Similarity=0.062 Sum_probs=122.6
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.|++++| |++++||+|+.||+|++||+.+++....+. +|...|++++|+|+|+.||+|+.||+|++||+
T Consensus 20 ~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVY----------TGQGFLNSVCYDSEKELLLFGGKDTMINGVPL 88 (313)
T ss_dssp CEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEE----------ECSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred CcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEee----------cCCccEEEEEECCCCCEEEEecCCCeEEEEEe
Confidence 4599999 999999999999999999999888877764 35688999999999999999999999999999
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecc-cch
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLK-LLN 2379 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~-~~~ 2379 (2389)
.... ..+++..+.+|...|.+++|. +++|+++ +.|++|++|| .++.+..+.+|.+.+.+++.++ +++
T Consensus 89 ~~~~--~~~~~~~~~~~~~~i~~~~~~---~~~l~~~---~~d~~i~~~d----~~~~~~~~~~~~~~v~~~~~~~~~~~ 156 (313)
T 3odt_A 89 FATS--GEDPLYTLIGHQGNVCSLSFQ---DGVVISG---SWDKTAKVWK----EGSLVYNLQAHNASVWDAKVVSFSEN 156 (313)
T ss_dssp TCCT--TSCC-CEECCCSSCEEEEEEE---TTEEEEE---ETTSEEEEEE----TTEEEEEEECCSSCEEEEEEEETTTT
T ss_pred eecC--CCCcccchhhcccCEEEEEec---CCEEEEE---eCCCCEEEEc----CCcEEEecccCCCceeEEEEccCCCC
Confidence 8752 235678889999999999994 4788886 4899999999 3567899999999999999988 888
Q ss_pred hhhccc
Q 000080 2380 FALSKC 2385 (2389)
Q Consensus 2380 ~~~s~~ 2385 (2389)
..++-+
T Consensus 157 ~l~~~~ 162 (313)
T 3odt_A 157 KFLTAS 162 (313)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 776644
No 114
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.66 E-value=1.3e-15 Score=180.40 Aligned_cols=149 Identities=11% Similarity=0.083 Sum_probs=123.1
Q ss_pred CCcCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCc
Q 000080 2215 ATVENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGT 2294 (2389)
Q Consensus 2215 atv~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgT 2294 (2389)
...+..+..-|+|+++ ++||+| .|++|||||..+|++++++. .| +|...|++|+|+|||++||+|+.||+
T Consensus 101 ~~~~d~y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~---~~-----~~~~~V~sv~fspdg~~lasgs~Dg~ 170 (420)
T 4gga_A 101 EIRNDYYLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQ---ME-----QPGEYISSVAWIKEGNYLAVGTSSAE 170 (420)
T ss_dssp TCCCCTTCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEE---CC-----STTCCEEEEEECTTSSEEEEEETTSC
T ss_pred CCcccccceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEE---ec-----CCCCcEEEEEECCCCCEEEEEECCCe
Confidence 3333333456799986 477766 59999999999999988875 22 46688999999999999999999999
Q ss_pred EEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEee
Q 000080 2295 VCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLP 2374 (2389)
Q Consensus 2295 VkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~ 2374 (2389)
|+|||++++ +.+.++.+|...+.++++++ .+|+++ +.|+++++||.. .....+..+.+|...+..+..
T Consensus 171 v~iWd~~~~-----~~~~~~~~h~~~v~~~s~~~---~~l~sg---s~d~~i~~~d~~-~~~~~~~~~~~h~~~~~~~~~ 238 (420)
T 4gga_A 171 VQLWDVQQQ-----KRLRNMTSHSARVGSLSWNS---YILSSG---SRSGHIHHHDVR-VAEHHVATLSGHSQEVCGLRW 238 (420)
T ss_dssp EEEEETTTT-----EEEEEECCCSSCEEEEEEET---TEEEEE---ETTSEEEEEETT-SSSCEEEEEECCSSCEEEEEE
T ss_pred EEEEEcCCC-----cEEEEEeCCCCceEEEeeCC---CEEEEE---eCCCceeEeeec-ccceeeEEecccccceeeeee
Confidence 999999986 57788999999999887765 889986 589999999984 234457899999999999999
Q ss_pred cccchhhhccc
Q 000080 2375 LKLLNFALSKC 2385 (2389)
Q Consensus 2375 ~~~~~~~~s~~ 2385 (2389)
+++|+..++-+
T Consensus 239 ~~~g~~l~s~~ 249 (420)
T 4gga_A 239 APDGRHLASGG 249 (420)
T ss_dssp CTTSSEEEEEE
T ss_pred cCCCCeeeeee
Confidence 99999887654
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.65 E-value=6.2e-16 Score=198.87 Aligned_cols=176 Identities=11% Similarity=0.061 Sum_probs=140.8
Q ss_pred ccceeeccccccccccccccC----CCCc--CceeEEEEEEcCC--CCeEEEEeCCCcEEEeecCCCc--eeeEecccCC
Q 000080 2193 GIGASALGWETQDDFEDYVDP----PATV--ENISTRAFSSHPL--RPFFLVGSSNTHIYLWEFGKDK--ATATYGVLPA 2262 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~----~atv--~ni~VrsVAFsPd--G~~LASGS~DgTIRLWDl~tGk--~l~Tl~vl~g 2262 (2389)
...|+| +.|...++|+.... ..++ +.-.|++++|+|+ |++|+||+.||+|++||+.+++ .+..+.
T Consensus 22 ~~latg-~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~---- 96 (753)
T 3jro_A 22 KRLATC-SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA---- 96 (753)
T ss_dssp CCEEEE-ETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEEC----
T ss_pred CeEEEE-ECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccccc----
Confidence 466777 77778888876411 1111 1236799999998 9999999999999999999887 444442
Q ss_pred CCCCCCCCCCCEEEEEECCC--CCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecC-----------
Q 000080 2263 ANVPPPYALASISALQFDHY--GHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITS----------- 2329 (2389)
Q Consensus 2263 h~~p~~GH~~~V~sVaFSPD--G~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~----------- 2329 (2389)
+|...|++|+|+|+ |+.|++|+.||+|++||++++. ......+.+|...|.+++|+|.
T Consensus 97 ------~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~---~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~ 167 (753)
T 3jro_A 97 ------VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG---TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGT 167 (753)
T ss_dssp ------CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS---CCCCEEEECCSSCEEEEEECCCC---------C
T ss_pred ------CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC---CcceeEeecCCCceEEEEecCcccccccccccC
Confidence 46789999999999 9999999999999999999863 1345677899999999999994
Q ss_pred -CCCEEEEeecCCCCCeEEEeeCCCCCC--CceEEEEeecCcEEEEeeccc---chhhhccc
Q 000080 2330 -SGSVIAAAGHSSNGINVVVWDTLAPPT--SSRASITCHEGLYDLFLPLKL---LNFALSKC 2385 (2389)
Q Consensus 2330 -DGslLASAG~sS~D~TVrLWD~l~~tg--~~v~sL~GH~~~V~svA~~~~---~~~~~s~~ 2385 (2389)
+|.+|+++ +.|++|++||+..... ..+..+.+|.+.|++++++|+ |+++++-+
T Consensus 168 ~d~~~l~sg---s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 168 KESRKFVTG---GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp GGGCCEEEE---ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred CCCCEEEEE---ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 48999997 4899999999842211 446788999999999999999 88887643
No 116
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.65 E-value=3.3e-16 Score=190.01 Aligned_cols=144 Identities=13% Similarity=0.070 Sum_probs=117.4
Q ss_pred eEEEEEEcCCCCeEE----EEeCCCcEEEeecCCC--------ceeeEecccCCCCCCCCCCCCCEEEEEECCC-CCEEE
Q 000080 2221 STRAFSSHPLRPFFL----VGSSNTHIYLWEFGKD--------KATATYGVLPAANVPPPYALASISALQFDHY-GHRFA 2287 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LA----SGS~DgTIRLWDl~tG--------k~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD-G~~LA 2287 (2389)
.|++++|+|+|++|| ||+.|++|++||+.++ +.+..+..+ .||...|++|+|+|+ ++.||
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-------~~h~~~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLL-------KDAGGMVIDMKWNPTVPSMVA 166 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECC-------CSGGGSEEEEEECSSCTTEEE
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeecc-------CCCCCceEEEEECCCCCCEEE
Confidence 368999999999999 8999999999998765 222333322 356789999999998 89999
Q ss_pred EEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecC
Q 000080 2288 SAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEG 2367 (2389)
Q Consensus 2288 SgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~ 2367 (2389)
+|+.||+|++||++++ .......+|...|.+++|+| +|++||+| +.|++|++||+. ++....+..|..
T Consensus 167 s~s~Dg~v~iwD~~~~-----~~~~~~~~~~~~v~~v~wsp-dg~~lasg---s~dg~v~iwd~~---~~~~~~~~~~~~ 234 (434)
T 2oit_A 167 VCLADGSIAVLQVTET-----VKVCATLPSTVAVTSVCWSP-KGKQLAVG---KQNGTVVQYLPT---LQEKKVIPCPPF 234 (434)
T ss_dssp EEETTSCEEEEEESSS-----EEEEEEECGGGCEEEEEECT-TSSCEEEE---ETTSCEEEECTT---CCEEEEECCCTT
T ss_pred EEECCCeEEEEEcCCC-----cceeeccCCCCceeEEEEcC-CCCEEEEE---cCCCcEEEEccC---CcccccccCCcc
Confidence 9999999999999985 23455667999999999999 89999997 489999999972 455666766543
Q ss_pred -------cEEEEeecccchhhhc
Q 000080 2368 -------LYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2368 -------~V~svA~~~~~~~~~s 2383 (2389)
.|.++++++++.|+++
T Consensus 235 ~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 235 YESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp CCTTSCEEEEEEEEEETTEEEEE
T ss_pred cCCCCceeEEEEEEecCceEEEE
Confidence 7899999998888744
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.64 E-value=8.4e-16 Score=197.64 Aligned_cols=148 Identities=18% Similarity=0.108 Sum_probs=125.8
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCC--CceeeEecccCCCCCCCCCCCCCEEEEEECCC--CCEEEEEeCCCcEE
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGK--DKATATYGVLPAANVPPPYALASISALQFDHY--GHRFASAALDGTVC 2296 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~t--Gk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD--G~~LASgS~DgTVk 2296 (2389)
.|++++|+|+|++|++|+.||+|++||+.+ ++.+.++. +|.+.|++|+|+|+ |+.||+|+.||+|+
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~----------~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT----------GHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC----------CCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc----------CCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 569999999999999999999999999974 45566653 56789999999998 99999999999999
Q ss_pred EeeCCCCCccCcccceeeeecCCCeeEEEEecCC--CCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEee
Q 000080 2297 TWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSS--GSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLP 2374 (2389)
Q Consensus 2297 LWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~D--GslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~ 2374 (2389)
+||++++. ......+.+|...|.+++|+| + |++++++ +.|++|++||+..........+.+|...|.++++
T Consensus 81 vwd~~~~~---~~~~~~~~~h~~~V~~v~~sp-~~~~~~l~sg---s~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~ 153 (753)
T 3jro_A 81 IWKEENGR---WSQIAVHAVHSASVNSVQWAP-HEYGPLLLVA---SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 153 (753)
T ss_dssp EEEEETTE---EEEEEEECCCSSCEEEEEECC-GGGCSEEEEE---ETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEE
T ss_pred EEECCCCc---ccccccccCCCCCeEEEEECC-CCCCCEEEEE---eCCCcEEEEEeecCCCcceeEeecCCCceEEEEe
Confidence 99999862 236778889999999999999 7 9999997 4899999999853323446788999999999999
Q ss_pred cc-------------cchhhhccc
Q 000080 2375 LK-------------LLNFALSKC 2385 (2389)
Q Consensus 2375 ~~-------------~~~~~~s~~ 2385 (2389)
+| +|+.+++-+
T Consensus 154 ~p~~~~~~~~~~~~~d~~~l~sgs 177 (753)
T 3jro_A 154 APATIEEDGEHNGTKESRKFVTGG 177 (753)
T ss_dssp CCCC---------CGGGCCEEEEE
T ss_pred cCcccccccccccCCCCCEEEEEE
Confidence 99 577776644
No 118
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.63 E-value=8.6e-16 Score=172.79 Aligned_cols=134 Identities=9% Similarity=-0.004 Sum_probs=114.5
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCc---eeeEecccCCCCCCCCCCCCCEEEEEECCCCC-EEEEEeCCCcEE
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDK---ATATYGVLPAANVPPPYALASISALQFDHYGH-RFASAALDGTVC 2296 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk---~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~-~LASgS~DgTVk 2296 (2389)
.|.+++|+|+|++|++|+.|++|++||+.+++ ....+. +|...|++++|+|+|+ .|++|+.||+|+
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL----------RYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE----------ECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee----------ecCCceEEEEECCCCCcEEEEEcCCCeEE
Confidence 46999999999999999999999999998887 222321 3668899999999999 999999999999
Q ss_pred EeeC-CCCCccCcccceeeee--cCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCC---------CCceEEEEe
Q 000080 2297 TWQL-EVGGRSNVRPMESCLC--FSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPP---------TSSRASITC 2364 (2389)
Q Consensus 2297 LWDl-~tggrs~~k~l~tl~g--Hs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~t---------g~~v~sL~G 2364 (2389)
+||+ +++ ....+.+ |...|.+++|+| +++|+++ +.|++|++||+. + +++++.+.
T Consensus 83 ~wd~~~~~------~~~~~~~~~~~~~v~~l~~~~--~~~l~s~---~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~- 148 (342)
T 1yfq_A 83 KVDLIGSP------SFQALTNNEANLGICRICKYG--DDKLIAA---SWDGLIEVIDPR--NYGDGVIAVKNLNSNNTK- 148 (342)
T ss_dssp EECSSSSS------SEEECBSCCCCSCEEEEEEET--TTEEEEE---ETTSEEEEECHH--HHTTBCEEEEESCSSSSS-
T ss_pred EEEeccCC------ceEeccccCCCCceEEEEeCC--CCEEEEE---cCCCeEEEEccc--ccccccccccCCeeeEEe-
Confidence 9999 865 2366778 999999999999 7889887 489999999973 4 55566666
Q ss_pred ecCcEEEEeecccc
Q 000080 2365 HEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2365 H~~~V~svA~~~~~ 2378 (2389)
|.+.|.++++++++
T Consensus 149 ~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 149 VKNKIFTMDTNSSR 162 (342)
T ss_dssp SCCCEEEEEECSSE
T ss_pred eCCceEEEEecCCc
Confidence 99999999999988
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.62 E-value=2.5e-15 Score=175.45 Aligned_cols=147 Identities=9% Similarity=-0.045 Sum_probs=117.5
Q ss_pred EEEEEEcCCCCeE-EEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCC-----------------
Q 000080 2222 TRAFSSHPLRPFF-LVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYG----------------- 2283 (2389)
Q Consensus 2222 VrsVAFsPdG~~L-ASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG----------------- 2283 (2389)
+..+++.++++.+ ++|+.|++|++||+.+|+++.++. |...|.+|+|+|++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-----------~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~ 129 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-----------VDAPVKDLFLSREFIVVSYGDVISVFKFGNP 129 (355)
T ss_dssp CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-----------CSSCEEEEEECSSEEEEEETTEEEEEESSTT
T ss_pred eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-----------CCCceEEEEEcCCEEEEEEcCEEEEEECCCC
Confidence 3567888888876 578889999999999999888774 23578888888864
Q ss_pred ------------------CEEEE--EeCCCcEEEeeCCCCCc----------cCccc-ceeeeecCCCeeEEEEecCCCC
Q 000080 2284 ------------------HRFAS--AALDGTVCTWQLEVGGR----------SNVRP-MESCLCFSSHAMDVSYITSSGS 2332 (2389)
Q Consensus 2284 ------------------~~LAS--gS~DgTVkLWDl~tggr----------s~~k~-l~tl~gHs~~V~sVAFSP~DGs 2332 (2389)
+.+|. |+.||+|++||++++.. ...++ +..+.+|.+.|.+++|+| ||+
T Consensus 130 ~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~ 208 (355)
T 3vu4_A 130 WKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSD 208 (355)
T ss_dssp CCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSS
T ss_pred ceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCC
Confidence 34444 57889999999987520 00123 678899999999999999 999
Q ss_pred EEEEeecCCCCCe-EEEeeCCCCCCCceEEEE-e-ecCcEEEEeecccchhhhccc
Q 000080 2333 VIAAAGHSSNGIN-VVVWDTLAPPTSSRASIT-C-HEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2333 lLASAG~sS~D~T-VrLWD~l~~tg~~v~sL~-G-H~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+|||+ +.|++ |+|||+ .++++++.+. | |.+.|++++++|+|++.++-+
T Consensus 209 ~l~s~---s~d~~~v~iwd~--~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 209 MVATC---SQDGTIIRVFKT--EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp EEEEE---ETTCSEEEEEET--TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEE
T ss_pred EEEEE---eCCCCEEEEEEC--CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEE
Confidence 99997 48999 999998 5788899998 6 999999999999999987643
No 120
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.60 E-value=4.5e-15 Score=176.29 Aligned_cols=163 Identities=14% Similarity=0.164 Sum_probs=132.1
Q ss_pred ccceeeccccccccccccccCCCC-------cCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDPPAT-------VENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANV 2265 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~~at-------v~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~ 2265 (2389)
++.++| +.|...++|+....... -+...|.+++| ++++|++|+.|++|++||+.+++++.++.
T Consensus 224 ~~l~s~-s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~------- 293 (435)
T 1p22_A 224 GMMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN------- 293 (435)
T ss_dssp TEEEEE-ETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE-------
T ss_pred CEEEEe-eCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEc-------
Confidence 466777 77777788876432111 11236688888 88999999999999999999999998884
Q ss_pred CCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCe
Q 000080 2266 PPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGIN 2345 (2389)
Q Consensus 2266 p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~T 2345 (2389)
+|...|.+++| +|+.+++|+.||+|++||++++ +++.++.+|...|.+++| +|++||+| +.|++
T Consensus 294 ---~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~-----~~~~~~~~h~~~v~~~~~---~~~~l~sg---~~dg~ 357 (435)
T 1p22_A 294 ---GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG-----ACLRVLEGHEELVRCIRF---DNKRIVSG---AYDGK 357 (435)
T ss_dssp ---CCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTC-----CEEEEECCCSSCEEEEEC---CSSEEEEE---ETTSC
T ss_pred ---CCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCC-----CEEEEEeCCcCcEEEEEe---cCCEEEEE---eCCCc
Confidence 46688999999 5789999999999999999986 467888999999999998 46899987 48999
Q ss_pred EEEeeCCCCCCC---------ceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2346 VVVWDTLAPPTS---------SRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2346 VrLWD~l~~tg~---------~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
|+|||+. +++ +++.+.+|.+.|.++++ +|++.++-+
T Consensus 358 i~vwd~~--~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s 402 (435)
T 1p22_A 358 IKVWDLV--AALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS 402 (435)
T ss_dssp EEEEEHH--HHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECC
T ss_pred EEEEECC--CCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEe
Confidence 9999973 222 68999999999999999 677766543
No 121
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.60 E-value=1.5e-14 Score=171.95 Aligned_cols=164 Identities=13% Similarity=0.158 Sum_probs=128.6
Q ss_pred ccceeeccccccccccccccC--CCCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCC
Q 000080 2193 GIGASALGWETQDDFEDYVDP--PATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPP 2268 (2389)
Q Consensus 2193 ~~~Asg~~~d~~~~~~~~~d~--~atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~ 2268 (2389)
...|+| +.|...++|+.... ..++ +...|.+++| ++++|++|+.||+|++||+.+++++.++.
T Consensus 144 ~~l~~g-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~---------- 210 (435)
T 1p22_A 144 QKIVSG-LRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI---------- 210 (435)
T ss_dssp SEEEEE-ESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEEC----------
T ss_pred CEEEEE-eCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEc----------
Confidence 345555 56666666665321 1111 1235688888 88999999999999999999999988874
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEE
Q 000080 2269 YALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVV 2348 (2389)
Q Consensus 2269 GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrL 2348 (2389)
+|...|.+++|++ +.|++|+.||+|++||++++. .......+.+|...|.+++| +|++||+| +.|++|++
T Consensus 211 ~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~---~~~~l~s~---~~dg~i~v 280 (435)
T 1p22_A 211 HHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT--DITLRRVLVGHRAAVNVVDF---DDKYIVSA---SGDRTIKV 280 (435)
T ss_dssp CCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSS--CCEEEEEECCCSSCEEEEEE---ETTEEEEE---ETTSEEEE
T ss_pred CCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCC--CceeeeEecCCCCcEEEEEe---CCCEEEEE---eCCCeEEE
Confidence 4678899999974 599999999999999999863 22333678899999999999 35899987 48999999
Q ss_pred eeCCCCCCCceEEEEeecCcEEEEeecccchhhhc
Q 000080 2349 WDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2349 WD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s 2383 (2389)
||+ .++++++.+.+|.+.|.++++. ++..++
T Consensus 281 wd~--~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 311 (435)
T 1p22_A 281 WNT--STCEFVRTLNGHKRGIACLQYR--DRLVVS 311 (435)
T ss_dssp EET--TTCCEEEEEECCSSCEEEEEEE--TTEEEE
T ss_pred EEC--CcCcEEEEEcCCCCcEEEEEeC--CCEEEE
Confidence 998 5678899999999999999984 555554
No 122
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.59 E-value=9.4e-15 Score=173.39 Aligned_cols=162 Identities=14% Similarity=0.171 Sum_probs=127.7
Q ss_pred cceeeccccccccccccccC--CCCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCC
Q 000080 2194 IGASALGWETQDDFEDYVDP--PATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPY 2269 (2389)
Q Consensus 2194 ~~Asg~~~d~~~~~~~~~d~--~atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~G 2269 (2389)
..|+| +.|...++|+.... ..++ +...|++++|+ +.+|++|+.|++|++||+.+++++.++. +
T Consensus 131 ~l~sg-~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~----------~ 197 (445)
T 2ovr_B 131 RIVSG-SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLY----------G 197 (445)
T ss_dssp EEEEE-ETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEEC----------C
T ss_pred EEEEE-ECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEEC----------C
Confidence 34555 55666666655311 1111 12356899998 5699999999999999999999988874 4
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEe
Q 000080 2270 ALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVW 2349 (2389)
Q Consensus 2270 H~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLW 2349 (2389)
|...|.+++|+ ++.|++|+.||+|++||++++ +++..+.+|...|.+++| +|++||++ +.|++|++|
T Consensus 198 h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~-----~~~~~~~~~~~~v~~~~~---~~~~l~~~---~~dg~i~iw 264 (445)
T 2ovr_B 198 HTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG-----QCLHVLMGHVAAVRCVQY---DGRRVVSG---AYDFMVKVW 264 (445)
T ss_dssp CSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC-----CEEEEEECCSSCEEEEEE---CSSCEEEE---ETTSCEEEE
T ss_pred CCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC-----cEEEEEcCCcccEEEEEE---CCCEEEEE---cCCCEEEEE
Confidence 67889999995 678999999999999999986 467788899999999998 46788886 489999999
Q ss_pred eCCCCCCCceEEEEeecCcEEEEeecccchhhhccc
Q 000080 2350 DTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2350 D~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
|+ .+++++..+.+|.+.|.++++ +|+++++-+
T Consensus 265 d~--~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 296 (445)
T 2ovr_B 265 DP--ETETCLHTLQGHTNRVYSLQF--DGIHVVSGS 296 (445)
T ss_dssp EG--GGTEEEEEECCCSSCEEEEEE--CSSEEEEEE
T ss_pred EC--CCCcEeEEecCCCCceEEEEE--CCCEEEEEe
Confidence 97 467788999999999999998 677766543
No 123
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.57 E-value=2.7e-14 Score=169.44 Aligned_cols=166 Identities=13% Similarity=0.125 Sum_probs=131.9
Q ss_pred cccceeeccccccccccccccC--CCCc--CceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCC
Q 000080 2192 AGIGASALGWETQDDFEDYVDP--PATV--ENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPP 2267 (2389)
Q Consensus 2192 ~~~~Asg~~~d~~~~~~~~~d~--~atv--~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~ 2267 (2389)
....++| +.|...++|+.... ..++ +...|.+++| ++.++++|+.|++|++||+.+++++.++.
T Consensus 249 ~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------- 316 (445)
T 2ovr_B 249 GRRVVSG-AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT--------- 316 (445)
T ss_dssp SSCEEEE-ETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEEC---------
T ss_pred CCEEEEE-cCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEc---------
Confidence 4456666 66777777765321 1111 1235688888 89999999999999999999999998874
Q ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeee---cCCCeeEEEEecCCCCEEEEeecCCCCC
Q 000080 2268 PYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLC---FSSHAMDVSYITSSGSVIAAAGHSSNGI 2344 (2389)
Q Consensus 2268 ~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~g---Hs~~V~sVAFSP~DGslLASAG~sS~D~ 2344 (2389)
+|...|.++++ +|+.|++|+.||+|++||++++ +++.++.+ |...|.+++|++ ++||++ +.|+
T Consensus 317 -~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~-----~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~---~~dg 382 (445)
T 2ovr_B 317 -GHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTG-----QCLQTLQGPNKHQSAVTCLQFNK---NFVITS---SDDG 382 (445)
T ss_dssp -CCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTC-----CEEEEECSTTSCSSCEEEEEECS---SEEEEE---ETTS
T ss_pred -CCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCC-----cEEEEEccCCCCCCCEEEEEECC---CEEEEE---eCCC
Confidence 35678888777 5789999999999999999986 35666665 889999999965 789987 4899
Q ss_pred eEEEeeCCCCCCCceEEE-----EeecCcEEEEeecccchhhhccc
Q 000080 2345 NVVVWDTLAPPTSSRASI-----TCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2345 TVrLWD~l~~tg~~v~sL-----~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+|+|||+ .+++.++.+ .+|.+.|++++++|+|.++.+-+
T Consensus 383 ~v~iwd~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 383 TVKLWDL--KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp EEEEEET--TTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEEC
T ss_pred eEEEEEC--CCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcc
Confidence 9999998 567788888 47999999999999999876543
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.52 E-value=1.4e-13 Score=158.85 Aligned_cols=139 Identities=8% Similarity=0.024 Sum_probs=112.3
Q ss_pred eEEEEEEcCCCCeE-EEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEE-EEeCCCcEEEe
Q 000080 2221 STRAFSSHPLRPFF-LVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFA-SAALDGTVCTW 2298 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~L-ASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LA-SgS~DgTVkLW 2298 (2389)
.+++++|+|+|++| ++++.|++|++||+.+++.+.++. . | ..|.+++|+|||++|+ +++.|++|++|
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~---~-------~-~~v~~~~~spdg~~l~~~~~~~~~v~v~ 101 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP---A-------G-SSPQGVAVSPDGKQVYVTNMASSTLSVI 101 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE---C-------S-SSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE---C-------C-CCccceEECCCCCEEEEEECCCCEEEEE
Confidence 35899999999976 788899999999999999988874 1 2 3799999999999875 55577999999
Q ss_pred eCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccc
Q 000080 2299 QLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~ 2378 (2389)
|++++ +....+.. ...+.+++|+| +|+.|+.++ +.|++|++||+ .+++.+..+..| ..+.+++++|+|
T Consensus 102 d~~~~-----~~~~~~~~-~~~~~~~~~s~-dg~~l~~~~--~~~~~v~~~d~--~~~~~~~~~~~~-~~~~~~~~~~dg 169 (391)
T 1l0q_A 102 DTTSN-----TVAGTVKT-GKSPLGLALSP-DGKKLYVTN--NGDKTVSVINT--VTKAVINTVSVG-RSPKGIAVTPDG 169 (391)
T ss_dssp ETTTT-----EEEEEEEC-SSSEEEEEECT-TSSEEEEEE--TTTTEEEEEET--TTTEEEEEEECC-SSEEEEEECTTS
T ss_pred ECCCC-----eEEEEEeC-CCCcceEEECC-CCCEEEEEe--CCCCEEEEEEC--CCCcEEEEEecC-CCcceEEECCCC
Confidence 99986 34455544 45789999999 889774333 58999999998 466778888866 456999999999
Q ss_pred hhhh
Q 000080 2379 NFAL 2382 (2389)
Q Consensus 2379 ~~~~ 2382 (2389)
++++
T Consensus 170 ~~l~ 173 (391)
T 1l0q_A 170 TKVY 173 (391)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 8763
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.50 E-value=5.8e-14 Score=164.29 Aligned_cols=147 Identities=7% Similarity=-0.062 Sum_probs=121.2
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCC
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEV 2302 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~t 2302 (2389)
.+++|+|++.++++++.|++|++||+.+|+.++.... + ...+|...|++++|+|+|+.+++++.|++|++||+++
T Consensus 126 ~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--~---~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 126 KSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPP--E---KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp CCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCC--H---HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred eEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCc--c---cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 4679999888999999999999999999988764321 0 0125678999999999999999999999999999998
Q ss_pred CCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhh
Q 000080 2303 GGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2303 ggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~ 2382 (2389)
+ +...++..|...+.+++|+| +|+.+++++ +.|++|++||+ .+++.+..+..| ..+.+++++|+|++++
T Consensus 201 ~-----~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~--~~~~~i~~~d~--~~~~~~~~~~~~-~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 201 L-----AYKATVDLTGKWSKILLYDP-IRDLVYCSN--WISEDISVIDR--KTKLEIRKTDKI-GLPRGLLLSKDGKELY 269 (433)
T ss_dssp C-----CEEEEEECSSSSEEEEEEET-TTTEEEEEE--TTTTEEEEEET--TTTEEEEECCCC-SEEEEEEECTTSSEEE
T ss_pred c-----eEEEEEcCCCCCeeEEEEcC-CCCEEEEEe--cCCCcEEEEEC--CCCcEEEEecCC-CCceEEEEcCCCCEEE
Confidence 6 35677778999999999999 888886554 57999999998 456667777754 5699999999998877
Q ss_pred ccc
Q 000080 2383 SKC 2385 (2389)
Q Consensus 2383 s~~ 2385 (2389)
.-+
T Consensus 270 ~~~ 272 (433)
T 3bws_A 270 IAQ 272 (433)
T ss_dssp EEE
T ss_pred EEE
Confidence 644
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.46 E-value=8.4e-13 Score=152.44 Aligned_cols=142 Identities=12% Similarity=0.054 Sum_probs=114.2
Q ss_pred eEEEEEEcCCCCeE-EEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEE-EEEeCCCcEEEe
Q 000080 2221 STRAFSSHPLRPFF-LVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRF-ASAALDGTVCTW 2298 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~L-ASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~L-ASgS~DgTVkLW 2298 (2389)
.+.+++|+|+|++| ++++.|++|++||+.+++.+..+. . ...+.+++|+|||+.| ++++.|++|++|
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~--------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 143 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK---T--------GKSPLGLALSPDGKKLYVTNNGDKTVSVI 143 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---C--------SSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe---C--------CCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 56899999999976 566678999999999999887764 1 2568999999999977 788899999999
Q ss_pred eCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccc
Q 000080 2299 QLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~ 2378 (2389)
|++++ +....+..| ..+.+++|+| +|+.|+.++ +.|++|++||+ .+++++..+. |...+.+++++|+|
T Consensus 144 d~~~~-----~~~~~~~~~-~~~~~~~~~~-dg~~l~~~~--~~~~~v~~~d~--~~~~~~~~~~-~~~~~~~~~~~~~g 211 (391)
T 1l0q_A 144 NTVTK-----AVINTVSVG-RSPKGIAVTP-DGTKVYVAN--FDSMSISVIDT--VTNSVIDTVK-VEAAPSGIAVNPEG 211 (391)
T ss_dssp ETTTT-----EEEEEEECC-SSEEEEEECT-TSSEEEEEE--TTTTEEEEEET--TTTEEEEEEE-CSSEEEEEEECTTS
T ss_pred ECCCC-----cEEEEEecC-CCcceEEECC-CCCEEEEEe--CCCCEEEEEEC--CCCeEEEEEe-cCCCccceEECCCC
Confidence 99986 345555555 4679999999 888774433 58899999998 4556666665 67789999999999
Q ss_pred hhhhccc
Q 000080 2379 NFALSKC 2385 (2389)
Q Consensus 2379 ~~~~s~~ 2385 (2389)
++++.-+
T Consensus 212 ~~l~~~~ 218 (391)
T 1l0q_A 212 TKAYVTN 218 (391)
T ss_dssp SEEEEEE
T ss_pred CEEEEEe
Confidence 9877543
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.46 E-value=8.1e-13 Score=158.56 Aligned_cols=142 Identities=10% Similarity=0.010 Sum_probs=114.0
Q ss_pred eEEEEEEcCCCCeEEEEeCCC---cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEE-EEeCCCc--
Q 000080 2221 STRAFSSHPLRPFFLVGSSNT---HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFA-SAALDGT-- 2294 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~Dg---TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LA-SgS~DgT-- 2294 (2389)
.|.+++|||||+.||+++.|+ +|++||+.+|++.. +. +|...|.+++|||||++|| +++.|+.
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~----------~~~~~~~~~~~spdg~~la~~~~~~g~~~ 248 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VA----------SFPRHNGAPAFSPDGSKLAFALSKTGSLN 248 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EE----------CCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-ee----------cCCCcccCEEEcCCCCEEEEEEecCCCce
Confidence 568999999999999999886 99999999998754 32 2446799999999999998 7777665
Q ss_pred EEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCC--eEEEeeCCCCCCCceEEEEeecCcEEEE
Q 000080 2295 VCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGI--NVVVWDTLAPPTSSRASITCHEGLYDLF 2372 (2389)
Q Consensus 2295 VkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~--TVrLWD~l~~tg~~v~sL~GH~~~V~sv 2372 (2389)
|++||++++. ...+..|...+.+++|+| ||+.||+++ ..|+ .|.+||+ .++ .+..+..|...+.++
T Consensus 249 i~~~d~~~~~------~~~l~~~~~~~~~~~~sp-dg~~l~~~s--~~~g~~~i~~~d~--~~~-~~~~l~~~~~~~~~~ 316 (415)
T 2hqs_A 249 LYVMDLASGQ------IRQVTDGRSNNTEPTWFP-DSQNLAFTS--DQAGRPQVYKVNI--NGG-APQRITWEGSQNQDA 316 (415)
T ss_dssp EEEEETTTCC------EEECCCCSSCEEEEEECT-TSSEEEEEE--CTTSSCEEEEEET--TSS-CCEECCCSSSEEEEE
T ss_pred EEEEECCCCC------EEeCcCCCCcccceEECC-CCCEEEEEE--CCCCCcEEEEEEC--CCC-CEEEEecCCCcccCe
Confidence 9999998762 356678889999999999 999999864 2345 5677786 333 356677788899999
Q ss_pred eecccchhhhccc
Q 000080 2373 LPLKLLNFALSKC 2385 (2389)
Q Consensus 2373 A~~~~~~~~~s~~ 2385 (2389)
+++|+|++++.-.
T Consensus 317 ~~spdG~~l~~~~ 329 (415)
T 2hqs_A 317 DVSSDGKFMVMVS 329 (415)
T ss_dssp EECTTSSEEEEEE
T ss_pred EECCCCCEEEEEE
Confidence 9999999877543
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.46 E-value=5.1e-13 Score=156.36 Aligned_cols=142 Identities=8% Similarity=0.000 Sum_probs=115.4
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEE-EEEeCCCcEEEee
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRF-ASAALDGTVCTWQ 2299 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~L-ASgS~DgTVkLWD 2299 (2389)
.|.+++|+|+|+++++++.|++|++||+.+++.+.++. +|...+.+++|+|||+.+ ++++.|++|++||
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD----------LTGKWSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE----------CSSSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc----------CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 57999999999999999999999999999999888774 255789999999999988 5556899999999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCC-----CCCeEEEeeCCCCCCCceEEEEeecCcEEEEee
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSS-----NGINVVVWDTLAPPTSSRASITCHEGLYDLFLP 2374 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS-----~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~ 2374 (2389)
++++ +....+..+ ..+.+++|+| +|+.|++++.+. .|++|++||+ .+++.+.. ..|.+.+.++++
T Consensus 241 ~~~~-----~~~~~~~~~-~~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~--~~~~~~~~-~~~~~~~~~~~~ 310 (433)
T 3bws_A 241 RKTK-----LEIRKTDKI-GLPRGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSM--DKEKLIDT-IGPPGNKRHIVS 310 (433)
T ss_dssp TTTT-----EEEEECCCC-SEEEEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEET--TTTEEEEE-EEEEECEEEEEE
T ss_pred CCCC-----cEEEEecCC-CCceEEEEcC-CCCEEEEEECCCCccccCCCeEEEEEC--CCCcEEee-ccCCCCcceEEE
Confidence 9976 344555444 4589999999 999999875322 4889999998 34454444 468889999999
Q ss_pred cccchhhh
Q 000080 2375 LKLLNFAL 2382 (2389)
Q Consensus 2375 ~~~~~~~~ 2382 (2389)
+|+|++++
T Consensus 311 ~~~g~~l~ 318 (433)
T 3bws_A 311 GNTENKIY 318 (433)
T ss_dssp CSSTTEEE
T ss_pred CCCCCEEE
Confidence 99998653
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.40 E-value=2.9e-13 Score=164.42 Aligned_cols=153 Identities=6% Similarity=-0.068 Sum_probs=115.5
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCC----------ceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEE----
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKD----------KATATYGVLPAANVPPPYALASISALQFDHYGHRFA---- 2287 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tG----------k~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LA---- 2287 (2389)
+..++++|++.++++|+.|+ |++|+..+- ..+.... +... ..|...|++|+|+|||++||
T Consensus 39 ~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKV--QGLL---VPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECC--CCEE---ECCSSCEEEEEECTTSCEEEEEEE
T ss_pred ccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccC--cccc---ccCCCcccEEEEcCCCCEEEEEEe
Confidence 36679999999999999998 999885311 0111111 0000 11346799999999999999
Q ss_pred EEeCCCcEEEeeCCCC-----Cc-cCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEE
Q 000080 2288 SAALDGTVCTWQLEVG-----GR-SNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRAS 2361 (2389)
Q Consensus 2288 SgS~DgTVkLWDl~tg-----gr-s~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~s 2361 (2389)
+|+.|++|++||++++ .. .....+..+.+|...|.+++|+|.++++||++ +.|++|+|||+. ++..+..
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~---s~Dg~v~iwD~~--~~~~~~~ 187 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC---LADGSIAVLQVT--ETVKVCA 187 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE---ETTSCEEEEEES--SSEEEEE
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE---ECCCeEEEEEcC--CCcceee
Confidence 8999999999999764 00 01112456678999999999999548999997 489999999983 4556677
Q ss_pred EEeecCcEEEEeecccchhhhccc
Q 000080 2362 ITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2362 L~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
..+|...|++++.+|+|++.++-+
T Consensus 188 ~~~~~~~v~~v~wspdg~~lasgs 211 (434)
T 2oit_A 188 TLPSTVAVTSVCWSPKGKQLAVGK 211 (434)
T ss_dssp EECGGGCEEEEEECTTSSCEEEEE
T ss_pred ccCCCCceeEEEEcCCCCEEEEEc
Confidence 788999999999999999887654
No 130
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.36 E-value=3.8e-13 Score=168.77 Aligned_cols=144 Identities=6% Similarity=-0.098 Sum_probs=111.1
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC---------C
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD---------G 2293 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D---------g 2293 (2389)
.+++|+|||+++++ +.|++|++||+.+|++...+. +|. .+...|.+++|||||++||+++.| +
T Consensus 20 ~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~---~~~----~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 20 PEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIE---GKK----IESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEEC---TTT----TTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred cccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEec---ccc----ccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 56699999998877 789999999999998877663 221 111259999999999999999885 7
Q ss_pred cEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcE----
Q 000080 2294 TVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLY---- 2369 (2389)
Q Consensus 2294 TVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V---- 2369 (2389)
+|.+||++++. .+.+....+|...+..++||| ||+.||+++ +++|++||+ .+++..+....|...+
T Consensus 92 ~i~~~d~~~~~---~~~l~~~~~~~~~~~~~~~SP-dG~~la~~~----~~~i~~~~~--~~g~~~~~~~~~~~~~~~~g 161 (723)
T 1xfd_A 92 YYVLSKIPHGD---PQSLDPPEVSNAKLQYAGWGP-KGQQLIFIF----ENNIYYCAH--VGKQAIRVVSTGKEGVIYNG 161 (723)
T ss_dssp EEEEEESSSCC---CEECCCTTCCSCCCSBCCBCS-STTCEEEEE----TTEEEEESS--SSSCCEEEECCCBTTTEEEE
T ss_pred eEEEEECCCCc---eEeccCCccccccccccEECC-CCCEEEEEE----CCeEEEEEC--CCCceEEEecCCCCCceECc
Confidence 78899999863 133444455666688999999 999999863 479999998 4566666655555444
Q ss_pred --------------EEEeecccchhhhcc
Q 000080 2370 --------------DLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2370 --------------~svA~~~~~~~~~s~ 2384 (2389)
.+++++|+|++++.-
T Consensus 162 ~~~~v~~ee~~~~~~~~~~SpDg~~la~~ 190 (723)
T 1xfd_A 162 LSDWLYEEEILKTHIAHWWSPDGTRLAYA 190 (723)
T ss_dssp ECCHHHHHTTSSSSEEEEECTTSSEEEEE
T ss_pred ccceeEEEEeccCcceEEECCCCCEEEEE
Confidence 899999999987653
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.34 E-value=2.6e-12 Score=161.99 Aligned_cols=145 Identities=11% Similarity=0.060 Sum_probs=112.1
Q ss_pred eEEEEEEcCCCCeEEEEeC-CC-----cEEEeecCCCceeeEecccCCCCCCCCCCC----------------------C
Q 000080 2221 STRAFSSHPLRPFFLVGSS-NT-----HIYLWEFGKDKATATYGVLPAANVPPPYAL----------------------A 2272 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~-Dg-----TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~----------------------~ 2272 (2389)
.|++++|+|||++|++++. |+ +|++||+.+|+..+.+. .+ ++. .
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD---SK-----VVLPGTETLSDEEKARRERQRIAAMT 109 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEEC---GG-----GTC--------------------CCE
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccc---hh-----hcccccccccchhhhhhhhhhhcccc
Confidence 3488999999999999998 88 99999999998776653 11 111 2
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCC
Q 000080 2273 SISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTL 2352 (2389)
Q Consensus 2273 ~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l 2352 (2389)
.|.+++|||||++||+++. ++|++||+.+++ . .....+..|...+.+++||| ||++||++ .+++|++||+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~--~-~~~~~l~~~~~~~~~~~~SP-DG~~la~~----~~~~i~~~d~- 179 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEG--K-AAVRQLTHGEGFATDAKLSP-KGGFVSFI----RGRNLWVIDL- 179 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCS--T-TSCCBCCCSSSCEEEEEECT-TSSEEEEE----ETTEEEEEET-
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCC--c-ceEEEcccCCcccccccCCC-CCCEEEEE----eCCcEEEEec-
Confidence 3789999999999999997 999999998751 0 02345667888999999999 99999986 3569999997
Q ss_pred CCCCCceEEEEeecCc----------------EEEEeecccchhhhcc
Q 000080 2353 APPTSSRASITCHEGL----------------YDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2353 ~~tg~~v~sL~GH~~~----------------V~svA~~~~~~~~~s~ 2384 (2389)
.+++..+....+... +.+++++|+|++++.-
T Consensus 180 -~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~ 226 (741)
T 2ecf_A 180 -ASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYA 226 (741)
T ss_dssp -TTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEE
T ss_pred -CCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEE
Confidence 344444433444432 4789999999987654
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.33 E-value=5.4e-12 Score=136.95 Aligned_cols=144 Identities=12% Similarity=-0.003 Sum_probs=109.4
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCC-CceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe--CCCcEEE
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGK-DKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA--LDGTVCT 2297 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~t-Gk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS--~DgTVkL 2297 (2389)
.|.+++|+|||++|++++ |+.|++||+.+ ++....+. ++ +...|.+++|+|||++|++++ .|+.++|
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~---~~------~~~~~~~~~~spdg~~l~~~~~~~~~~~~l 112 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDT---GF------ATICNNDHGISPDGALYAISDKVEFGKSAI 112 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCC---TT------CCCBCSCCEECTTSSEEEEEECTTTSSCEE
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecc---cc------ccccccceEECCCCCEEEEEEeCCCCcceE
Confidence 458999999999999987 78999999988 77655442 21 236789999999999999999 5567777
Q ss_pred eeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeeccc
Q 000080 2298 WQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKL 2377 (2389)
Q Consensus 2298 WDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~ 2377 (2389)
|.+...+ .....+..+. .+..++|+| ||+.|+.++ +.|++++||++... +.....+..|...+.+++++|+
T Consensus 113 ~~~~~~~----~~~~~~~~~~-~~~~~~~sp-dg~~l~~~~--~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~s~d 183 (297)
T 2ojh_A 113 YLLPSTG----GTPRLMTKNL-PSYWHGWSP-DGKSFTYCG--IRDQVFDIYSMDID-SGVETRLTHGEGRNDGPDYSPD 183 (297)
T ss_dssp EEEETTC----CCCEECCSSS-SEEEEEECT-TSSEEEEEE--EETTEEEEEEEETT-TCCEEECCCSSSCEEEEEECTT
T ss_pred EEEECCC----CceEEeecCC-CccceEECC-CCCEEEEEE--CCCCceEEEEEECC-CCcceEcccCCCccccceECCC
Confidence 7665322 1233444343 488999999 899888433 47899999997422 3456778889999999999999
Q ss_pred chhhhc
Q 000080 2378 LNFALS 2383 (2389)
Q Consensus 2378 ~~~~~s 2383 (2389)
|++++.
T Consensus 184 g~~l~~ 189 (297)
T 2ojh_A 184 GRWIYF 189 (297)
T ss_dssp SSEEEE
T ss_pred CCEEEE
Confidence 997653
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.33 E-value=1.4e-11 Score=148.01 Aligned_cols=142 Identities=9% Similarity=0.024 Sum_probs=109.3
Q ss_pred eEEEEEEcCCCCeEE-EEeCCCc--EEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC-CC--c
Q 000080 2221 STRAFSSHPLRPFFL-VGSSNTH--IYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL-DG--T 2294 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LA-SGS~DgT--IRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~-Dg--T 2294 (2389)
.+.+++|+|||+.|| +++.|+. |++||+.+++.. .+. +|...+.+++|||||++|+.++. |+ .
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~----------~~~~~~~~~~~spdg~~l~~~s~~~g~~~ 292 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVT----------DGRSNNTEPTWFPDSQNLAFTSDQAGRPQ 292 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECC----------CCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCc----------CCCCcccceEECCCCCEEEEEECCCCCcE
Confidence 458999999999888 7777665 999999888763 332 24578999999999999999887 45 5
Q ss_pred EEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEee
Q 000080 2295 VCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLP 2374 (2389)
Q Consensus 2295 VkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~ 2374 (2389)
|.+||+.++. ...+..|...+.+++|+| ||++||+++....+.+|++||+ .+++ +..+..|. .+.++++
T Consensus 293 i~~~d~~~~~------~~~l~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~--~~~~-~~~l~~~~-~~~~~~~ 361 (415)
T 2hqs_A 293 VYKVNINGGA------PQRITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDL--ATGG-VQVLSSTF-LDETPSL 361 (415)
T ss_dssp EEEEETTSSC------CEECCCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEET--TTCC-EEECCCSS-SCEEEEE
T ss_pred EEEEECCCCC------EEEEecCCCcccCeEECC-CCCEEEEEECcCCceEEEEEEC--CCCC-EEEecCCC-CcCCeEE
Confidence 7777888752 344556778899999999 9999998752212468999997 3444 46677675 8999999
Q ss_pred cccchhhhcc
Q 000080 2375 LKLLNFALSK 2384 (2389)
Q Consensus 2375 ~~~~~~~~s~ 2384 (2389)
+|+|++++.-
T Consensus 362 spdg~~l~~~ 371 (415)
T 2hqs_A 362 APNGTMVIYS 371 (415)
T ss_dssp CTTSSEEEEE
T ss_pred cCCCCEEEEE
Confidence 9999987653
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.31 E-value=4.9e-12 Score=158.83 Aligned_cols=145 Identities=9% Similarity=0.009 Sum_probs=109.1
Q ss_pred EEEEEEcCCCCeEEEEeCC---------CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC
Q 000080 2222 TRAFSSHPLRPFFLVGSSN---------THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD 2292 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~D---------gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D 2292 (2389)
|.+++|||||++||+++.| ++|++||+.+|++ +.+.. + .+|...|..++|||||++||.++.
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~---~----~~~~~~~~~~~~SPdG~~la~~~~- 133 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDP---P----EVSNAKLQYAGWGPKGQQLIFIFE- 133 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCC---T----TCCSCCCSBCCBCSSTTCEEEEET-
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccC---C----ccccccccccEECCCCCEEEEEEC-
Confidence 5889999999999999875 7888999998876 33321 1 245567999999999999999997
Q ss_pred CcEEEeeCCCCCccCcccceeeeecCC------------------CeeEEEEecCCCCEEEEeecCC-------------
Q 000080 2293 GTVCTWQLEVGGRSNVRPMESCLCFSS------------------HAMDVSYITSSGSVIAAAGHSS------------- 2341 (2389)
Q Consensus 2293 gTVkLWDl~tggrs~~k~l~tl~gHs~------------------~V~sVAFSP~DGslLASAG~sS------------- 2341 (2389)
++|++||+.++. .......+.. .+.+++||| ||+.||+++...
T Consensus 134 ~~i~~~~~~~g~-----~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~ 207 (723)
T 1xfd_A 134 NNIYYCAHVGKQ-----AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTG 207 (723)
T ss_dssp TEEEEESSSSSC-----CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSS
T ss_pred CeEEEEECCCCc-----eEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCC
Confidence 799999999863 2222222222 237899999 999999874210
Q ss_pred ------------------CCCeEEEeeCCCCCCCceEEEEee------cCcEEEEeecccchhhhc
Q 000080 2342 ------------------NGINVVVWDTLAPPTSSRASITCH------EGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2342 ------------------~D~TVrLWD~l~~tg~~v~sL~GH------~~~V~svA~~~~~~~~~s 2383 (2389)
.+.+|++||+ .++++...+..| ...+.+++++|+|+++++
T Consensus 208 ~~~~~~~~~~~~~~G~~~~~~~l~~~d~--~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~ 271 (723)
T 1xfd_A 208 SIYPTVKPYHYPKAGSENPSISLHVIGL--NGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVT 271 (723)
T ss_dssp SSSCCCEEEECCBTTSCCCEEEEEEEES--SSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEE
T ss_pred cCCCcceeccCCCCCCCCCeeEEEEEEC--CCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEE
Confidence 0128999997 455556777765 678999999999998754
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.30 E-value=9.9e-12 Score=134.85 Aligned_cols=146 Identities=10% Similarity=-0.005 Sum_probs=111.7
Q ss_pred EEEEEEcCCCCeEE-EEeCCCcEEEeecCC-CceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe-CCCcEEEe
Q 000080 2222 TRAFSSHPLRPFFL-VGSSNTHIYLWEFGK-DKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA-LDGTVCTW 2298 (2389)
Q Consensus 2222 VrsVAFsPdG~~LA-SGS~DgTIRLWDl~t-Gk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS-~DgTVkLW 2298 (2389)
+..++|+|||++|+ +++.|++++||++.. +.....+. .|...+.+++|+|||+.|+.++ .|++++||
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~----------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 200 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT----------HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIW 200 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC----------CSSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc----------cCCCccccceECCCCCEEEEEecCCCCccEE
Confidence 57889999999877 888999999999642 22333331 2447799999999999888776 59999999
Q ss_pred eCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCC--------CCCeEEEeeCCCCCCCc--eEEEEeecCc
Q 000080 2299 QLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSS--------NGINVVVWDTLAPPTSS--RASITCHEGL 2368 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS--------~D~TVrLWD~l~~tg~~--v~sL~GH~~~ 2368 (2389)
++...+ .....+..|...+.+++|+| ||++||+++... .++.|.+||+ .+++. +..+.+|...
T Consensus 201 ~~~~~~----~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~--~~~~~~~~~~~~~~~~~ 273 (297)
T 2ojh_A 201 RVRVDG----SSVERITDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLMDM--DGGNVETLFDLFGGQGT 273 (297)
T ss_dssp EEETTS----SCEEECCCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEEET--TSCSCEEEEEEEESTTT
T ss_pred EECCCC----CCcEEEecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCceEEEEEec--CCCCceeeeccCCCCcc
Confidence 987432 34566777888899999999 999999875211 1257999998 34444 4556689999
Q ss_pred EEEEeecccchhhhcc
Q 000080 2369 YDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2369 V~svA~~~~~~~~~s~ 2384 (2389)
+.+++++|+|++++.-
T Consensus 274 ~~~~~~spdg~~l~~~ 289 (297)
T 2ojh_A 274 MNSPNWSPDGDEFAYV 289 (297)
T ss_dssp SCSCCBCTTSSEEEEE
T ss_pred cccceECCCCCEEEEE
Confidence 9999999999987654
No 136
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.26 E-value=4.3e-12 Score=156.73 Aligned_cols=133 Identities=11% Similarity=-0.023 Sum_probs=109.0
Q ss_pred EEEEEcCCCCeEEEEeCC----CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCC--cEE
Q 000080 2223 RAFSSHPLRPFFLVGSSN----THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDG--TVC 2296 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~D----gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~Dg--TVk 2296 (2389)
.+++|+|||++||+++.| ++|++||+.+|+.. ++. +|...+.+++|||||++||+++.|+ +|+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~----------~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~ 221 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFD----------SGEGSFSSASISPGMKVTAGLETAREARLV 221 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EEC----------CSSCEEEEEEECTTSCEEEEEECSSCEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Eee----------cCCCccccceECCCCCEEEEccCCCeeEEE
Confidence 678999999999999988 89999999888764 442 3457799999999999999999999 999
Q ss_pred EeeCCCCCccCcccceeeeecCCCeeEEE--------EecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCc
Q 000080 2297 TWQLEVGGRSNVRPMESCLCFSSHAMDVS--------YITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGL 2368 (2389)
Q Consensus 2297 LWDl~tggrs~~k~l~tl~gHs~~V~sVA--------FSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~ 2368 (2389)
+||++++. .. .+.+|...+.+++ |+| ||.+++++ +.|++++||++ ++.+. .+.+.
T Consensus 222 ~~d~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~sp-dg~~~~~~---~~~g~~~l~~~----g~~~~---~~~~~ 284 (582)
T 3o4h_A 222 TVDPRDGS-----VE-DLELPSKDFSSYRPTAITWLGYLP-DGRLAVVA---RREGRSAVFID----GERVE---APQGN 284 (582)
T ss_dssp EECTTTCC-----EE-ECCCSCSHHHHHCCSEEEEEEECT-TSCEEEEE---EETTEEEEEET----TEEEC---CCSSE
T ss_pred EEcCCCCc-----EE-EccCCCcChhhhhhccccceeEcC-CCcEEEEE---EcCCcEEEEEE----CCeec---cCCCc
Confidence 99999862 23 6677888888888 999 88888886 48999999997 44433 45577
Q ss_pred EEEEeecccchhhhcc
Q 000080 2369 YDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2369 V~svA~~~~~~~~~s~ 2384 (2389)
|.+++++ +|+++++.
T Consensus 285 v~~~~~s-dg~~l~~~ 299 (582)
T 3o4h_A 285 HGRVVLW-RGKLVTSH 299 (582)
T ss_dssp EEEEEEE-TTEEEEEE
T ss_pred eEEEEec-CCEEEEEE
Confidence 8899999 88887653
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.23 E-value=8.8e-11 Score=147.07 Aligned_cols=142 Identities=8% Similarity=-0.038 Sum_probs=112.0
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeec--CCCceeeEecccCCCCCCCCCCCCCEEEEEECC----CCCEEEEEe-CCCc
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEF--GKDKATATYGVLPAANVPPPYALASISALQFDH----YGHRFASAA-LDGT 2294 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl--~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSP----DG~~LASgS-~DgT 2294 (2389)
++.++|+|||++|++++.|++|++||+ .+++++.++. +...++.|+||| ||+++++++ .|++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-----------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~ 249 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-----------IGIEARSVESSKFKGYEDRYTIAGAYWPPQ 249 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-----------CCSEEEEEEECCSTTCTTTEEEEEEEESSE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-----------cCCCcceEEeCCCcCCCCCEEEEEEccCCe
Confidence 588999999999999999999999999 8898888874 125689999999 999999998 5899
Q ss_pred EEEeeCCCCCccCcccceeeee----------c-CCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceE--E
Q 000080 2295 VCTWQLEVGGRSNVRPMESCLC----------F-SSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRA--S 2361 (2389)
Q Consensus 2295 VkLWDl~tggrs~~k~l~tl~g----------H-s~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~--s 2361 (2389)
|++||..++ +++.++.. | ...+.+++|+|+++.++++. ..+++|.+||+. +.+.+. .
T Consensus 250 v~v~D~~t~-----~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~---~~~g~i~vvd~~--~~~~l~~~~ 319 (543)
T 1nir_A 250 FAIMDGETL-----EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV---KETGKVLLVNYK--DIDNLTVTS 319 (543)
T ss_dssp EEEEETTTC-----CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE---TTTTEEEEEECT--TSSSCEEEE
T ss_pred EEEEecccc-----ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE---CCCCeEEEEEec--CCCcceeEE
Confidence 999999886 34444433 3 23789999999444455553 689999999983 444433 4
Q ss_pred EEeecCcEEEEeecccchhhhccc
Q 000080 2362 ITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2362 L~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+ .|...+..++++|+|++++.-+
T Consensus 320 i-~~~~~~~~~~~spdg~~l~va~ 342 (543)
T 1nir_A 320 I-GAAPFLHDGGWDSSHRYFMTAA 342 (543)
T ss_dssp E-ECCSSCCCEEECTTSCEEEEEE
T ss_pred e-ccCcCccCceECCCCCEEEEEe
Confidence 4 4777888999999999876543
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.22 E-value=1.1e-10 Score=147.52 Aligned_cols=213 Identities=11% Similarity=0.023 Sum_probs=132.6
Q ss_pred CCCcceeecCCCCCCeEEEEecC-Cc-----EEEEeCCCCcccccccccccceeeeeccCCC------------------
Q 000080 39 RSTSTIDWLPDFAGYSWVAYGAS-SL-----LVISHFPSPLSQEEALIGPIFRQVFALSDNS------------------ 94 (2389)
Q Consensus 39 ~~~~ai~wlpD~~G~~~vAYasg-~~-----vVI~~l~SP~~~~e~~~~p~~~Qviegh~d~------------------ 94 (2389)
.....++|+|| | .++||++. .. -|..| +...+ +. ++.+.++.+.
T Consensus 37 ~~~~~~~~Spd--G-~~la~~~~~d~~~~~~~i~~~--d~~~g-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (741)
T 2ecf_A 37 PTLMKPKVAPD--G-SRVTFLRGKDSDRNQLDLWSY--DIGSG-QT------RLLVDSKVVLPGTETLSDEEKARRERQR 104 (741)
T ss_dssp CCCEEEEECTT--S-SEEEEEECCSSCTTEEEEEEE--ETTTC-CE------EEEECGGGTC------------------
T ss_pred CCCCCceEecC--C-CEEEEEeccCCCCcccEEEEE--ECCCC-ce------eEccchhhcccccccccchhhhhhhhhh
Confidence 35678999999 8 59999986 43 45555 33323 22 2445444331
Q ss_pred ----CCeeEEEEcCCCCCCCcEEEecCCeEEEEeeCCCCCCCCccceeeEEecccceEEEEeecCCCCeEEEEecc-eEE
Q 000080 95 ----LPVTSISWSPETPSIGQLAAASENCIFVFAHDSASSKGSFCWSQNAILVQGTKVEAIEWTGSGDGIVAGGME-TVL 169 (2389)
Q Consensus 95 ----~dVk~VaWSPd~~~~GeIaASyDntIRVw~~d~~~~kgd~~W~~~~tL~hssTV~sIAWSpdG~rLaSggdD-V~I 169 (2389)
..|..++|||| +..|+.+++++|++|..+... +... .....+...|..++|||||++||+++++ |.+
T Consensus 105 ~~~~~~v~~~~~SpD---g~~l~~~~~~~i~~~d~~~~~-~~~~----~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~ 176 (741)
T 2ecf_A 105 IAAMTGIVDYQWSPD---AQRLLFPLGGELYLYDLKQEG-KAAV----RQLTHGEGFATDAKLSPKGGFVSFIRGRNLWV 176 (741)
T ss_dssp --CCEESCCCEECTT---SSEEEEEETTEEEEEESSSCS-TTSC----CBCCCSSSCEEEEEECTTSSEEEEEETTEEEE
T ss_pred hccccCcceeEECCC---CCEEEEEeCCcEEEEECCCCC-cceE----EEcccCCcccccccCCCCCCEEEEEeCCcEEE
Confidence 13899999998 666776677999999876210 0011 1111356789999999999999998886 999
Q ss_pred eeccCCcEEEEEEeeccccce----------------EEEEeecCCCc-eEeeecccc---------------------c
Q 000080 170 WKKKNTLWEIAWKFKENYPQN----------------LVSATWSIEGP-SATAASMSQ---------------------L 211 (2389)
Q Consensus 170 W~~~~s~Wecvwt~~~~~~~~----------------ivsvaWSpdG~-fATag~dik---------------------f 211 (2389)
|+..++....+. ..+... +.+++|||||. +|+++.+.. |
T Consensus 177 ~d~~~g~~~~~~---~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 177 IDLASGRQMQLT---ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp EETTTTEEEECC---CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred EecCCCCEEEec---cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 997766554332 122221 24579999999 888876421 2
Q ss_pred ccCCCCCCCceeEEEeeCC-Cccceeecc--cCCCCeeEEEeccCCCCCCCCCCccccCceEEeeec-----CCeEEEEE
Q 000080 212 DLLGPKEAGKCVFICCSDG-KSEYIKLEL--CHPQPVSMVQWRPSTRRHSPGDTKRSQRHVLLTCCL-----DGTVRLWC 283 (2389)
Q Consensus 212 ~~~~~~~~~kpV~V~~~dg-~~~~~~ve~--aH~qdVn~V~W~Ps~~~~~~~Dgk~~~~nILAScSd-----DgTVRLW~ 283 (2389)
...+..+....++++..++ .. ...+.. .|...|..++| | ||+. |+.++. |++|++|+
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-p--------Dg~~-----l~~~~~~~~~~~~~i~~~d 318 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQ-TQWIDLGKEQDIYLARVNW-R--------DPQH-----LSFQRQSRDQKKLDLVEVT 318 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCC-CEEECCCSCSSEEEEEEEE-E--------ETTE-----EEEEEEETTSSEEEEEEEE
T ss_pred CCCCCCCCeeEEEEEECCCCCc-eEEecCCCCcceEEEEEEe-C--------CCCE-----EEEEEecccCCeEEEEEEE
Confidence 2111111223456664333 22 222322 58889999999 9 7777 665543 67888888
Q ss_pred eecCCcc
Q 000080 284 EMDSGKT 290 (2389)
Q Consensus 284 e~d~Gk~ 290 (2389)
.. .|+.
T Consensus 319 ~~-~g~~ 324 (741)
T 2ecf_A 319 LA-SNQQ 324 (741)
T ss_dssp TT-TCCE
T ss_pred CC-CCce
Confidence 43 3443
No 139
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.22 E-value=4.3e-12 Score=160.05 Aligned_cols=143 Identities=13% Similarity=0.142 Sum_probs=104.5
Q ss_pred EEEEEEcCCCCeEEEEeC---------CCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC
Q 000080 2222 TRAFSSHPLRPFFLVGSS---------NTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD 2292 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~---------DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D 2292 (2389)
|.+++|||||++||+++. |++|++||+.+|+.+...+ + ...|..++|||||++||.++ |
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l----------~~~~~~~~~SPDG~~la~~~-~ 129 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-L----------PRPIQYLCWSPVGSKLAYVY-Q 129 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-C----------CSSBCCEEECSSTTCEEEEE-T
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-c----------CcccccceECCCCCEEEEEE-C
Confidence 588999999999999887 8999999999887632111 1 14588999999999999996 7
Q ss_pred CcEEEeeCCCCCccCcccceeeeecCCCe-----------------eEEEEecCCCCEEEEeecCC--------------
Q 000080 2293 GTVCTWQLEVGGRSNVRPMESCLCFSSHA-----------------MDVSYITSSGSVIAAAGHSS-------------- 2341 (2389)
Q Consensus 2293 gTVkLWDl~tggrs~~k~l~tl~gHs~~V-----------------~sVAFSP~DGslLASAG~sS-------------- 2341 (2389)
++|++||+.++.. .. .+..++...| .+++||| ||+.||+++...
T Consensus 130 ~~i~~~~~~~g~~---~~-l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~ 204 (719)
T 1z68_A 130 NNIYLKQRPGDPP---FQ-ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDE 204 (719)
T ss_dssp TEEEEESSTTSCC---EE-CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSS
T ss_pred CeEEEEeCCCCCc---EE-EecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCC
Confidence 8999999988631 11 1122333322 4899999 999999874210
Q ss_pred -----------------CCCeEEEeeCCCCCCCce--------EEEEeecCcEEEEeecccchhhhc
Q 000080 2342 -----------------NGINVVVWDTLAPPTSSR--------ASITCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2342 -----------------~D~TVrLWD~l~~tg~~v--------~sL~GH~~~V~svA~~~~~~~~~s 2383 (2389)
.+.+|++||+ .+++.+ ..+.+|...+.+++.+|+|+.+++
T Consensus 205 ~~~~~~~~~yp~~g~~~~~~~l~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~ 269 (719)
T 1z68_A 205 QYPRTINIPYPKAGAKNPVVRIFIIDT--TYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQ 269 (719)
T ss_dssp SSCEEEEEECCBTTSCCCEEEEEEEES--SCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEE
T ss_pred CCccceeecCCCCCCCCCeeEEEEEEC--CCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEE
Confidence 0118999997 344432 224578889999999999987765
No 140
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.21 E-value=7.1e-11 Score=147.89 Aligned_cols=136 Identities=9% Similarity=-0.016 Sum_probs=112.1
Q ss_pred EEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC--CCC
Q 000080 2226 SSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL--EVG 2303 (2389)
Q Consensus 2226 AFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl--~tg 2303 (2389)
+|+|++.++++++.|++|++||..+++++.++.. ||. ++.++|||||++|++++.|++|++||+ +++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~---------g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~ 212 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT---------GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP 212 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC---------STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec---------Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC
Confidence 4899999999999999999999999999988851 232 899999999999999999999999999 665
Q ss_pred CccCcccceeeeecCCCeeEEEEec--C-CCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEe----------ecC-cE
Q 000080 2304 GRSNVRPMESCLCFSSHAMDVSYIT--S-SGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITC----------HEG-LY 2369 (2389)
Q Consensus 2304 grs~~k~l~tl~gHs~~V~sVAFSP--~-DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~G----------H~~-~V 2369 (2389)
+.+.++. +...++.++|+| + ||++|++++ ..|++|+|||. .+.++++.+.. |.+ .+
T Consensus 213 -----~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~--~~~~~v~v~D~--~t~~~~~~i~~~g~~~~~~~~~~~~~v 282 (543)
T 1nir_A 213 -----TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGA--YWPPQFAIMDG--ETLEPKQIVSTRGMTVDTQTYHPEPRV 282 (543)
T ss_dssp -----EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEE--EESSEEEEEET--TTCCEEEEEECCEECSSSCCEESCCCE
T ss_pred -----cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEE--ccCCeEEEEec--cccccceeecccCcccCccccccCCce
Confidence 4556665 456789999997 1 688888864 36899999997 57788888865 444 78
Q ss_pred EEEeecccchhhh
Q 000080 2370 DLFLPLKLLNFAL 2382 (2389)
Q Consensus 2370 ~svA~~~~~~~~~ 2382 (2389)
..+++++++++.+
T Consensus 283 ~~i~~s~~~~~~~ 295 (543)
T 1nir_A 283 AAIIASHEHPEFI 295 (543)
T ss_dssp EEEEECSSSSEEE
T ss_pred EEEEECCCCCEEE
Confidence 9999999876543
No 141
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.18 E-value=2.4e-10 Score=131.82 Aligned_cols=149 Identities=11% Similarity=0.107 Sum_probs=104.4
Q ss_pred eEEEEEEcCCCCeEE-EEeCCCcEEEeecCCCce------e------eEecccCCCCCCCCCCCCCEEEEEECCCCCEEE
Q 000080 2221 STRAFSSHPLRPFFL-VGSSNTHIYLWEFGKDKA------T------ATYGVLPAANVPPPYALASISALQFDHYGHRFA 2287 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LA-SGS~DgTIRLWDl~tGk~------l------~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LA 2287 (2389)
.++.++|+|||++|+ ++..+++|++|++..+.. + .... .+ +...++.++|+|||++++
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~--------~~~~~~~~~~spdg~~l~ 226 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK-VA--------PGSGPRHLIFNSDGKFAY 226 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-CC--------TTCCEEEEEECTTSSEEE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee-cC--------CCCCCeEEEEcCCCCEEE
Confidence 357899999999654 455689999999875432 1 1221 11 125578999999999887
Q ss_pred EEe-CCCcEEEeeCCCCCccCccccee---eeecCCCeeEEEEecCCCCEEEEeecCCC-CCeEEEeeCCCCCCC--ceE
Q 000080 2288 SAA-LDGTVCTWQLEVGGRSNVRPMES---CLCFSSHAMDVSYITSSGSVIAAAGHSSN-GINVVVWDTLAPPTS--SRA 2360 (2389)
Q Consensus 2288 SgS-~DgTVkLWDl~tggrs~~k~l~t---l~gHs~~V~sVAFSP~DGslLASAG~sS~-D~TVrLWD~l~~tg~--~v~ 2360 (2389)
+++ .+++|++||++++. ...+.. ...+.....+++|+| ||++|+.++ .. +++|+|||+...+++ .+.
T Consensus 227 v~~~~~~~v~v~~~~~g~---~~~~~~~~~~~~~~~~~~~i~~sp-dg~~l~v~~--~~~~~~i~v~~~~~~~g~~~~~~ 300 (361)
T 3scy_A 227 LINEIGGTVIAFRYADGM---LDEIQTVAADTVNAQGSGDIHLSP-DGKYLYASN--RLKADGVAIFKVDETNGTLTKVG 300 (361)
T ss_dssp EEETTTCEEEEEEEETTE---EEEEEEEESCSSCCCCEEEEEECT-TSSEEEEEE--CSSSCEEEEEEECTTTCCEEEEE
T ss_pred EEcCCCCeEEEEEecCCc---eEEeEEEecCCCCCCCcccEEECC-CCCEEEEEC--CCCCCEEEEEEEcCCCCcEEEee
Confidence 777 69999999998652 122222 233445578999999 999887653 34 689999998433444 244
Q ss_pred EEEeecCcEEEEeecccchhhhccc
Q 000080 2361 SITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2361 sL~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
.+.. ...+..++++|+|++++.-+
T Consensus 301 ~~~~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 301 YQLT-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp EEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred EecC-CCCCceEEECCCCCEEEEEE
Confidence 5554 55788999999999876544
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.16 E-value=3.9e-10 Score=127.57 Aligned_cols=144 Identities=6% Similarity=-0.056 Sum_probs=109.9
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC-CCcEEEeeCC
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL-DGTVCTWQLE 2301 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~-DgTVkLWDl~ 2301 (2389)
..++|+|||++|+.++.|+.|++||..+++.+.++.. + ..++...+..++|+|||+++..++. +++|.+||++
T Consensus 188 ~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~--~----~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 261 (353)
T 3vgz_A 188 TGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL--L----DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTR 261 (353)
T ss_dssp CCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC--C----CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT
T ss_pred ceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc--C----CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 5669999999999999999999999999998877642 1 1245567899999999997766665 5999999999
Q ss_pred CCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhh
Q 000080 2302 VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFA 2381 (2389)
Q Consensus 2302 tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~ 2381 (2389)
++. .+..+.... ...++|+| ||+.|..++ ..|++|.+||+ .+++.+..+..+ ..+.+++++++|+++
T Consensus 262 ~~~-----~~~~~~~~~--~~~~~~s~-dg~~l~v~~--~~~~~v~~~d~--~~~~~~~~~~~~-~~~~~~~~s~dg~~l 328 (353)
T 3vgz_A 262 NGN-----ILAKVAAPE--SLAVLFNP-ARNEAYVTH--RQAGKVSVIDA--KSYKVVKTFDTP-THPNSLALSADGKTL 328 (353)
T ss_dssp TCC-----EEEEEECSS--CCCEEEET-TTTEEEEEE--TTTTEEEEEET--TTTEEEEEEECC-SEEEEEEECTTSCEE
T ss_pred CCc-----EEEEEEcCC--CceEEECC-CCCEEEEEE--CCCCeEEEEEC--CCCeEEEEEecC-CCCCeEEEcCCCCEE
Confidence 863 334443322 25699999 888665543 57899999997 456667777654 478999999999966
Q ss_pred hccc
Q 000080 2382 LSKC 2385 (2389)
Q Consensus 2382 ~s~~ 2385 (2389)
+--+
T Consensus 329 ~v~~ 332 (353)
T 3vgz_A 329 YVSV 332 (353)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5433
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.16 E-value=5.5e-10 Score=127.85 Aligned_cols=155 Identities=7% Similarity=-0.038 Sum_probs=104.6
Q ss_pred EEEEEEcCCCCeEEEEe-CCCcEEEeecC-CCce--eeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEE
Q 000080 2222 TRAFSSHPLRPFFLVGS-SNTHIYLWEFG-KDKA--TATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCT 2297 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS-~DgTIRLWDl~-tGk~--l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkL 2297 (2389)
+..++|+|||++|++++ .|++|++||+. +|+. +..+. ..+....+..+...+.+++|+|||+.+++...+++|++
T Consensus 88 p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~ 166 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQ-HSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYV 166 (347)
T ss_dssp CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEE-CCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceee-cCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEE
Confidence 36789999999888887 78999999995 3432 33321 11110000012346999999999998888888999999
Q ss_pred eeCCCCCccCcccceeeeecC-CCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc--eEEEEeec------Cc
Q 000080 2298 WQLEVGGRSNVRPMESCLCFS-SHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS--RASITCHE------GL 2368 (2389)
Q Consensus 2298 WDl~tggrs~~k~l~tl~gHs-~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~--v~sL~GH~------~~ 2368 (2389)
||+...++ +........+. ..+..++|+| ||++|+.++ ..+++|++||+...+++. ++.+..+. ..
T Consensus 167 ~~~~~~g~--~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~--~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 3hfq_A 167 YNVSDAGQ--LSEQSVLTMEAGFGPRHLVFSP-DGQYAFLAG--ELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNG 241 (347)
T ss_dssp EEECTTSC--EEEEEEEECCTTCCEEEEEECT-TSSEEEEEE--TTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCE
T ss_pred EEECCCCc--EEEeeeEEcCCCCCCceEEECC-CCCEEEEEe--CCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCc
Confidence 99984321 12222222222 3678899999 999777654 578999999984323432 34444444 45
Q ss_pred EEEEeecccchhhh
Q 000080 2369 YDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2369 V~svA~~~~~~~~~ 2382 (2389)
+..++++|+|+++.
T Consensus 242 ~~~i~~spdG~~l~ 255 (347)
T 3hfq_A 242 AAAIRLSHDGHFLY 255 (347)
T ss_dssp EEEEEECTTSCEEE
T ss_pred ceeEEECCCCCEEE
Confidence 88999999999763
No 144
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.16 E-value=2.5e-11 Score=153.11 Aligned_cols=137 Identities=9% Similarity=-0.004 Sum_probs=101.5
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCC---CEEEEEECCCCCEEEEEeC---------
Q 000080 2224 AFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALA---SISALQFDHYGHRFASAAL--------- 2291 (2389)
Q Consensus 2224 sVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~---~V~sVaFSPDG~~LASgS~--------- 2291 (2389)
+++|+|||++++++ .|++|++||+.+|++...+. + |.. .|.+++|||||++||+++.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~---~-------~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~ 88 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILS---N-------RTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSY 88 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEEC---H-------HHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEc---c-------ccccccceeeEEECCCCCeEEEEecCceeEEeec
Confidence 45999999766654 69999999999998876653 1 212 3899999999999999987
Q ss_pred CCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE-EeecC---
Q 000080 2292 DGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI-TCHEG--- 2367 (2389)
Q Consensus 2292 DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL-~GH~~--- 2367 (2389)
|++|++||++++. ......+ ...+.+++||| ||+.||++ .|++|++||+ .++++.+.. .+|..
T Consensus 89 ~~~i~~~d~~~g~---~~~~~~l---~~~~~~~~~SP-DG~~la~~----~~~~i~~~~~--~~g~~~~l~~~~~~~~v~ 155 (719)
T 1z68_A 89 TATYYIYDLSNGE---FVRGNEL---PRPIQYLCWSP-VGSKLAYV----YQNNIYLKQR--PGDPPFQITFNGRENKIF 155 (719)
T ss_dssp EEEEEEEETTTTE---ECCSSCC---CSSBCCEEECS-STTCEEEE----ETTEEEEESS--TTSCCEECCCCCBTTTEE
T ss_pred ceEEEEEECCCCc---cccceec---CcccccceECC-CCCEEEEE----ECCeEEEEeC--CCCCcEEEecCCCcCCeE
Confidence 8999999999862 1000222 25688899999 99999986 4789999997 344443321 33333
Q ss_pred -----cE---------EEEeecccchhhhcc
Q 000080 2368 -----LY---------DLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2368 -----~V---------~svA~~~~~~~~~s~ 2384 (2389)
+| .+++.+|+|+++++-
T Consensus 156 ~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~ 186 (719)
T 1z68_A 156 NGIPDWVYEEEMLATKYALWWSPNGKFLAYA 186 (719)
T ss_dssp ESSCCHHHHHHTTCSSCCEEECTTSSEEEEE
T ss_pred cccccceeeeecccCcccEEECCCCCEEEEE
Confidence 32 489999999988753
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.15 E-value=1.1e-10 Score=155.33 Aligned_cols=142 Identities=14% Similarity=0.033 Sum_probs=116.7
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEE-EeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIY-LWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIR-LWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
.++.++|+ ||+.|++++.+.+|. +||+.+++.. .+. +|...|.+++|||||++||+++.|++|++||
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~----------~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d 406 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFE----------ENLGNVFAMGVDRNGKFAVVANDRFEIMTVD 406 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECC----------CCCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-Eec----------CCccceeeeEECCCCCEEEEECCCCeEEEEE
Confidence 67899999 999999999999999 9999776643 331 3457899999999999999999999999999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecC-------CCCCeEEEeeCCCCCCCceEEEEeecCcEEEE
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHS-------SNGINVVVWDTLAPPTSSRASITCHEGLYDLF 2372 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~s-------S~D~TVrLWD~l~~tg~~v~sL~GH~~~V~sv 2372 (2389)
++++. ......+|.+.+.+++|+| ||++||+++.. ..+++|++||+ .+++ +..+..|...+.++
T Consensus 407 ~~tg~-----~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~--~~g~-~~~l~~~~~~~~~~ 477 (1045)
T 1k32_A 407 LETGK-----PTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDM--EGRK-IFAATTENSHDYAP 477 (1045)
T ss_dssp TTTCC-----EEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEET--TTTE-EEECSCSSSBEEEE
T ss_pred CCCCc-----eEEeccCCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEEC--CCCc-EEEeeCCCcccCCc
Confidence 99862 3344558999999999999 99999987521 12359999997 3444 78888999999999
Q ss_pred eecccchhhhc
Q 000080 2373 LPLKLLNFALS 2383 (2389)
Q Consensus 2373 A~~~~~~~~~s 2383 (2389)
+++|+|++++.
T Consensus 478 ~~spdG~~l~~ 488 (1045)
T 1k32_A 478 AFDADSKNLYY 488 (1045)
T ss_dssp EECTTSCEEEE
T ss_pred eEcCCCCEEEE
Confidence 99999997654
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.14 E-value=5.8e-10 Score=126.10 Aligned_cols=139 Identities=17% Similarity=0.096 Sum_probs=109.0
Q ss_pred EEEEEEcCCCCeEEEEe--CCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2222 TRAFSSHPLRPFFLVGS--SNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS--~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
++.++|+|+|++++.++ .|++|++||..+++.+.++. . +...+..++|+|||+++++++.|+.|.+||
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~---~-------~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d 212 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ---N-------TGKMSTGLALDSEGKRLYTTNADGELITID 212 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC---C-------CCTTCCCCEEETTTTEEEEECTTSEEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec---C-------CCCccceEEECCCCCEEEEEcCCCeEEEEE
Confidence 58899999999776665 58999999999999887763 1 124478899999999999999999999999
Q ss_pred CCCCCccCcccceeee----ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeec
Q 000080 2300 LEVGGRSNVRPMESCL----CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPL 2375 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~----gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~ 2375 (2389)
++++. ...... ++...+.+++|+| ||+.|+.++ ..++.|.+||+ .+++.+..+..+. -..++++
T Consensus 213 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~--~~~~~v~~~d~--~~~~~~~~~~~~~--~~~~~~s 280 (353)
T 3vgz_A 213 TADNK-----ILSRKKLLDDGKEHFFINISLDT-ARQRAFITD--SKAAEVLVVDT--RNGNILAKVAAPE--SLAVLFN 280 (353)
T ss_dssp TTTTE-----EEEEEECCCSSSCCCEEEEEEET-TTTEEEEEE--SSSSEEEEEET--TTCCEEEEEECSS--CCCEEEE
T ss_pred CCCCe-----EEEEEEcCCCCCCcccceEEECC-CCCEEEEEe--CCCCEEEEEEC--CCCcEEEEEEcCC--CceEEEC
Confidence 99862 333333 3566788999999 888777654 46799999998 4667777776544 2579999
Q ss_pred ccchhhh
Q 000080 2376 KLLNFAL 2382 (2389)
Q Consensus 2376 ~~~~~~~ 2382 (2389)
|+|++++
T Consensus 281 ~dg~~l~ 287 (353)
T 3vgz_A 281 PARNEAY 287 (353)
T ss_dssp TTTTEEE
T ss_pred CCCCEEE
Confidence 9998654
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.13 E-value=6.5e-10 Score=125.52 Aligned_cols=139 Identities=10% Similarity=0.133 Sum_probs=103.3
Q ss_pred EEEcCCCCeEEEEeCCC---cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEE-EEEeCCCc-EEEee
Q 000080 2225 FSSHPLRPFFLVGSSNT---HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRF-ASAALDGT-VCTWQ 2299 (2389)
Q Consensus 2225 VAFsPdG~~LASGS~Dg---TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~L-ASgS~DgT-VkLWD 2299 (2389)
++|+|||++|+++..++ +|++||+.+++.+.++. . .....+++|+|||+++ ++...+++ |++|+
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~---~--------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP---I--------PYDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE---C--------CTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE---C--------CCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 79999999999665553 99999999999887764 1 1346899999999855 55566688 99999
Q ss_pred CCCCCccCcccc-eeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc---eEEEEeecCcEEEEeec
Q 000080 2300 LEVGGRSNVRPM-ESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS---RASITCHEGLYDLFLPL 2375 (2389)
Q Consensus 2300 l~tggrs~~k~l-~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~---v~sL~GH~~~V~svA~~ 2375 (2389)
+...+. .... .....+......++|+| ||++|+.++ ..+++|++||+ .+++. +..+.. ...+..++++
T Consensus 158 ~~~~g~--~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~--~~~~~v~v~d~--~~~~~~~~~~~~~~-~~~~~~~~~s 229 (331)
T 3u4y_A 158 IDADGV--LFDTGQEFISGGTRPFNITFTP-DGNFAFVAN--LIGNSIGILET--QNPENITLLNAVGT-NNLPGTIVVS 229 (331)
T ss_dssp ECTTCC--EEEEEEEEECSSSSEEEEEECT-TSSEEEEEE--TTTTEEEEEEC--SSTTSCEEEEEEEC-SSCCCCEEEC
T ss_pred ECCCCc--EeecCCccccCCCCccceEECC-CCCEEEEEe--CCCCeEEEEEC--CCCcccceeeeccC-CCCCceEEEC
Confidence 986531 1111 12223445688999999 898665553 57899999997 46676 777774 4677899999
Q ss_pred ccchhhh
Q 000080 2376 KLLNFAL 2382 (2389)
Q Consensus 2376 ~~~~~~~ 2382 (2389)
|+|++++
T Consensus 230 pdg~~l~ 236 (331)
T 3u4y_A 230 RDGSTVY 236 (331)
T ss_dssp TTSSEEE
T ss_pred CCCCEEE
Confidence 9999764
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.13 E-value=4.8e-10 Score=128.37 Aligned_cols=152 Identities=9% Similarity=0.065 Sum_probs=105.9
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecC-CCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEE-EeCCCcEEEe
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFG-KDKATATYGVLPAANVPPPYALASISALQFDHYGHRFAS-AALDGTVCTW 2298 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~-tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LAS-gS~DgTVkLW 2298 (2389)
.+..++|+|||++++++..+++|++||+. +|+...... ...+ . ...++.++|+|||++++. +..+++|++|
T Consensus 142 ~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~-~~~~----~--g~~p~~~~~spdg~~l~v~~~~~~~v~v~ 214 (347)
T 3hfq_A 142 HIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSV-LTME----A--GFGPRHLVFSPDGQYAFLAGELSSQIASL 214 (347)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEE-EECC----T--TCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeee-EEcC----C--CCCCceEEECCCCCEEEEEeCCCCEEEEE
Confidence 35889999999988888889999999998 565432211 0011 1 135789999999995555 5678999999
Q ss_pred eCCCCCccCcccceeeeecC------CCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCC--CceEEEEeecCcEE
Q 000080 2299 QLEVGGRSNVRPMESCLCFS------SHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPT--SSRASITCHEGLYD 2370 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gHs------~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg--~~v~sL~GH~~~V~ 2370 (2389)
++..... ..........+. ..+.+++|+| ||++|+.++ ..+++|++||+. +.+ +.+..+..|...+.
T Consensus 215 ~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~--~~~~~v~v~~~~-~~g~~~~~~~~~~~~~~~~ 289 (347)
T 3hfq_A 215 KYDTQTG-AFTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFLYVSN--RGYNTLAVFAVT-ADGHLTLIQQISTEGDFPR 289 (347)
T ss_dssp EEETTTT-EEEEEEEEESSCTTCCSCCEEEEEEECT-TSCEEEEEE--ETTTEEEEEEEC-GGGCEEEEEEEECSSSCCC
T ss_pred EecCCCC-ceEEeeeeeecCCCCCCCCcceeEEECC-CCCEEEEEe--CCCCEEEEEEEC-CCCcEEEeEEEecCCCCcC
Confidence 9875210 112223333222 3488899999 999875443 468999999983 222 33566777777899
Q ss_pred EEeecccchhhhcc
Q 000080 2371 LFLPLKLLNFALSK 2384 (2389)
Q Consensus 2371 svA~~~~~~~~~s~ 2384 (2389)
.++++|+|++++.-
T Consensus 290 ~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 290 DFDLDPTEAFVVVV 303 (347)
T ss_dssp EEEECTTSSEEEEE
T ss_pred eEEECCCCCEEEEE
Confidence 99999999987653
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.13 E-value=5.5e-10 Score=125.12 Aligned_cols=145 Identities=8% Similarity=0.074 Sum_probs=100.9
Q ss_pred EEEEEEcCCCCeEEEEe-CCCcEEEeecCCC---ceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe-CCCcEE
Q 000080 2222 TRAFSSHPLRPFFLVGS-SNTHIYLWEFGKD---KATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA-LDGTVC 2296 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS-~DgTIRLWDl~tG---k~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS-~DgTVk 2296 (2389)
+..++|+|+|++|++++ .|++|++||+.+| +.+.++. .+ ..+.+++|+|||+++++++ .|++|+
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~--------~~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE---GL--------DGCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC---CC--------TTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc---CC--------CCceEEEECCCCCEEEEecCCCCEEE
Confidence 36789999999776655 5899999999544 3344432 21 3488999999999888887 899999
Q ss_pred EeeCCCCCccCcccce--eeee-cCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc--eEEEEe----e--
Q 000080 2297 TWQLEVGGRSNVRPME--SCLC-FSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS--RASITC----H-- 2365 (2389)
Q Consensus 2297 LWDl~tggrs~~k~l~--tl~g-Hs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~--v~sL~G----H-- 2365 (2389)
+||+++.++ ..... .... ....+..++|+| +|++|+.++ ..+++|++||+...+++. ++.+.. |
T Consensus 155 ~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p-dg~~l~~~~--~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (343)
T 1ri6_A 155 LFTVSDDGH--LVAQDPAEVTTVEGAGPRHMVFHP-NEQYAYCVN--ELNSSVDVWELKDPHGNIECVQTLDMMPENFSD 229 (343)
T ss_dssp EEEECTTSC--EEEEEEEEEECSTTCCEEEEEECT-TSSEEEEEE--TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCS
T ss_pred EEEecCCCc--eeeecccccccCCCCCcceEEECC-CCCEEEEEe--CCCCEEEEEEecCCCCcEEEEeeccccCccccc
Confidence 999987221 12212 2222 335788999999 899776553 578999999984333333 233331 1
Q ss_pred cCcEEEEeecccchhhh
Q 000080 2366 EGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2366 ~~~V~svA~~~~~~~~~ 2382 (2389)
...+..++++|+|++++
T Consensus 230 ~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 230 TRWAADIHITPDGRHLY 246 (343)
T ss_dssp CCCEEEEEECTTSSEEE
T ss_pred cCCccceEECCCCCEEE
Confidence 23566899999998765
No 150
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.11 E-value=5.5e-11 Score=152.40 Aligned_cols=141 Identities=10% Similarity=-0.011 Sum_probs=104.7
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCC---------
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDG--------- 2293 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~Dg--------- 2293 (2389)
.+++|+|||++|+++ |++|++||+.+|++...+. +|... .+......++|||||++||.++.|+
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLE---NSTFD--EFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEEC---TTTTT--TCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCceEEEEe---chhhh--hhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 567999999999996 9999999999999876663 44211 1112234589999999999999984
Q ss_pred cEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceE-EEEeecCcE---
Q 000080 2294 TVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRA-SITCHEGLY--- 2369 (2389)
Q Consensus 2294 TVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~-sL~GH~~~V--- 2369 (2389)
.+.+||++++. ...+..|...+..++||| ||+.||.+ .|++|.+||+ .+++..+ +..++.+.+
T Consensus 93 ~~~~~d~~~~~------~~~l~~~~~~~~~~~~SP-dG~~la~~----~~~~i~~~~~--~~~~~~~lt~~g~~~~~~~g 159 (740)
T 4a5s_A 93 SYDIYDLNKRQ------LITEERIPNNTQWVTWSP-VGHKLAYV----WNNDIYVKIE--PNLPSYRITWTGKEDIIYNG 159 (740)
T ss_dssp EEEEEETTTTE------ECCSSCCCTTEEEEEECS-STTCEEEE----ETTEEEEESS--TTSCCEECCSCCBTTTEEES
T ss_pred EEEEEECCCCc------EEEcccCCCcceeeEECC-CCCEEEEE----ECCeEEEEEC--CCCceEEEcCCCCccceecC
Confidence 45699999862 234567888999999999 99999985 5789999997 3444432 223443322
Q ss_pred --------------EEEeecccchhhhc
Q 000080 2370 --------------DLFLPLKLLNFALS 2383 (2389)
Q Consensus 2370 --------------~svA~~~~~~~~~s 2383 (2389)
..++.||||+++..
T Consensus 160 ~~~~v~~ee~~~~~~~~~wSpDg~~la~ 187 (740)
T 4a5s_A 160 ITDWVYEEEVFSAYSALWWSPNGTFLAY 187 (740)
T ss_dssp BCCHHHHHHTSSSSBCEEECTTSSEEEE
T ss_pred cccccccchhcCCCcceEECCCCCEEEE
Confidence 34899999997764
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.10 E-value=1.2e-09 Score=125.98 Aligned_cols=141 Identities=7% Similarity=0.038 Sum_probs=100.3
Q ss_pred eEEEEEEcCCCCeEEEEe-CCCcEEEeecCCCce--eeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC--CCcE
Q 000080 2221 STRAFSSHPLRPFFLVGS-SNTHIYLWEFGKDKA--TATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL--DGTV 2295 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS-~DgTIRLWDl~tGk~--l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~--DgTV 2295 (2389)
..+.++|+|||++++.++ .+++|++||+.+|+. +.++... +++......++|||||++|+++.. +++|
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~-------~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD-------TVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC-------SSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC-------CCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 458899999999877666 799999999987764 3333211 223456799999999998866555 5999
Q ss_pred EEeeCC--CCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE-EeecCcEEEE
Q 000080 2296 CTWQLE--VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI-TCHEGLYDLF 2372 (2389)
Q Consensus 2296 kLWDl~--tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL-~GH~~~V~sv 2372 (2389)
++|++. ++ ..+.+..+.. ...+.+++|+| ||++|++++ ..+++|++|++...+++..... ..|...+.||
T Consensus 285 ~v~~~~~~~g---~~~~~~~~~~-g~~~~~~~~sp-dg~~l~~~~--~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v 357 (361)
T 3scy_A 285 AIFKVDETNG---TLTKVGYQLT-GIHPRNFIITP-NGKYLLVAC--RDTNVIQIFERDQATGLLTDIKKDIKVDKPVCL 357 (361)
T ss_dssp EEEEECTTTC---CEEEEEEEEC-SSCCCEEEECT-TSCEEEEEE--TTTTEEEEEEECTTTCCEEECSCCEECSSEEEE
T ss_pred EEEEEcCCCC---cEEEeeEecC-CCCCceEEECC-CCCEEEEEE--CCCCCEEEEEEECCCCcEeecceeeeCCCCeEE
Confidence 999996 33 1234444443 45788999999 999888874 4789999987643455543322 3466678888
Q ss_pred eec
Q 000080 2373 LPL 2375 (2389)
Q Consensus 2373 A~~ 2375 (2389)
++.
T Consensus 358 ~~~ 360 (361)
T 3scy_A 358 KFV 360 (361)
T ss_dssp EEE
T ss_pred EEc
Confidence 875
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.10 E-value=2.6e-10 Score=151.69 Aligned_cols=143 Identities=13% Similarity=0.072 Sum_probs=114.5
Q ss_pred eeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCC------
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDG------ 2293 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~Dg------ 2293 (2389)
..+..++|+|||++||+++.|++|++||+.+|+....+. +|...|.+++|||||++||+++.++
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~----------~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER----------SREAMITDFTISDNSRFIAYGFPLKHGETDG 448 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----------CSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc----------CCCCCccceEECCCCCeEEEEecCccccccC
Confidence 356899999999999999999999999999998776653 3457789999999999999998765
Q ss_pred ----cEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCC---------------
Q 000080 2294 ----TVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAP--------------- 2354 (2389)
Q Consensus 2294 ----TVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~--------------- 2354 (2389)
+|++||+.++ + ...+..|...+.+++|+| ||+.|+++ +.++..++|+....
T Consensus 449 ~~~~~i~l~d~~~g-----~-~~~l~~~~~~~~~~~~sp-dG~~l~~~---s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1045)
T 1k32_A 449 YVMQAIHVYDMEGR-----K-IFAATTENSHDYAPAFDA-DSKNLYYL---SYRSLDPSPDRVVLNFSFEVVSKPFVIPL 518 (1045)
T ss_dssp CCEEEEEEEETTTT-----E-EEECSCSSSBEEEEEECT-TSCEEEEE---ESCCCCCEECSSSSCEECCSCBEEEEEES
T ss_pred CCCCeEEEEECCCC-----c-EEEeeCCCcccCCceEcC-CCCEEEEE---ecccCCcCcchhccccccccCceeEEEEe
Confidence 9999999975 2 566778888999999999 99999986 36666677763100
Q ss_pred ------------------------CC--CceEEEEeecCcEEEEeecccchhhh
Q 000080 2355 ------------------------PT--SSRASITCHEGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2355 ------------------------tg--~~v~sL~GH~~~V~svA~~~~~~~~~ 2382 (2389)
.+ ..+..+..|.+.+..++++|+|...+
T Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~ 572 (1045)
T 1k32_A 519 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 572 (1045)
T ss_dssp STTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEE
T ss_pred CCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEE
Confidence 01 12456667888999999999998554
No 153
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.10 E-value=6.2e-10 Score=124.73 Aligned_cols=150 Identities=13% Similarity=0.117 Sum_probs=103.2
Q ss_pred EEEEEEcCCCCeEEEEe-CCCcEEEeecCC-Cceee----EecccCCCCCCCCCCCCCEEEEEECCCCCEEEEE-eCCCc
Q 000080 2222 TRAFSSHPLRPFFLVGS-SNTHIYLWEFGK-DKATA----TYGVLPAANVPPPYALASISALQFDHYGHRFASA-ALDGT 2294 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS-~DgTIRLWDl~t-Gk~l~----Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASg-S~DgT 2294 (2389)
+..++|+|+|++|++++ .|++|++||+.+ ++... .+. .+ ....++.++|+|||++++.+ ..|++
T Consensus 131 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~---~~------~~~~~~~~~~~pdg~~l~~~~~~~~~ 201 (343)
T 1ri6_A 131 CHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVT---TV------EGAGPRHMVFHPNEQYAYCVNELNSS 201 (343)
T ss_dssp BCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEE---CS------TTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred ceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccc---cC------CCCCcceEEECCCCCEEEEEeCCCCE
Confidence 36679999999888777 899999999987 65432 221 11 12468999999999977555 48999
Q ss_pred EEEeeCCCCCccCcccceeee----ec--CCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCC--CceEEEEeec
Q 000080 2295 VCTWQLEVGGRSNVRPMESCL----CF--SSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPT--SSRASITCHE 2366 (2389)
Q Consensus 2295 VkLWDl~tggrs~~k~l~tl~----gH--s~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg--~~v~sL~GH~ 2366 (2389)
|++||++.... ......... +| ...+.+++|+| ||+.|+.++ +.|++|++||+...++ +.+..+..+.
T Consensus 202 i~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~i~~s~-dg~~l~v~~--~~~~~i~v~d~~~~~~~~~~~~~~~~~~ 277 (343)
T 1ri6_A 202 VDVWELKDPHG-NIECVQTLDMMPENFSDTRWAADIHITP-DGRHLYACD--RTASLITVFSVSEDGSVLSKEGFQPTET 277 (343)
T ss_dssp EEEEESSCTTS-CCEEEEEEECSCTTCCSCCCEEEEEECT-TSSEEEEEE--TTTTEEEEEEECTTSCCEEEEEEEECSS
T ss_pred EEEEEecCCCC-cEEEEeeccccCccccccCCccceEECC-CCCEEEEEe--cCCCEEEEEEEcCCCCceEEeeeecCCC
Confidence 99999964210 111122222 11 23566899999 888877543 5789999999842222 2345566555
Q ss_pred CcEEEEeecccchhhhccc
Q 000080 2367 GLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2367 ~~V~svA~~~~~~~~~s~~ 2385 (2389)
. +..++++|+|++++.-+
T Consensus 278 ~-~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 278 Q-PRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp S-CCCEEECTTSSEEEEEC
T ss_pred c-cceEEECCCCCEEEEec
Confidence 4 88999999999876544
No 154
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.09 E-value=1.2e-09 Score=123.47 Aligned_cols=136 Identities=7% Similarity=-0.096 Sum_probs=101.2
Q ss_pred EEcCCCCe-EEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC-CCcEEEeeCCCC
Q 000080 2226 SSHPLRPF-FLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL-DGTVCTWQLEVG 2303 (2389)
Q Consensus 2226 AFsPdG~~-LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~-DgTVkLWDl~tg 2303 (2389)
.|.+++++ +++++.|++|++||..+|+.+.++.. +...+ .++|+|||+++++++. |++|.+||++++
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~----------~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 72 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL----------GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE 72 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC----------CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc----------cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC
Confidence 56776664 88899999999999999998777641 12446 9999999996666655 899999999986
Q ss_pred CccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCC-C--eEEEeeCCCCCCCceEEEEeecCcEEEEeecccchh
Q 000080 2304 GRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNG-I--NVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2304 grs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D-~--TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~ 2380 (2389)
. .....+..+.....+++|+| ||++|+++ ..+ + +|++||+ .+++.++.+..+ ....+++++|+|++
T Consensus 73 ~----~~~~~~~~~~~~~~~~~~s~-dg~~l~~~---~~~~~~~~i~v~d~--~~~~~~~~~~~~-~~~~~~~~spdg~~ 141 (331)
T 3u4y_A 73 P----PKVVAIQEGQSSMADVDITP-DDQFAVTV---TGLNHPFNMQSYSF--LKNKFISTIPIP-YDAVGIAISPNGNG 141 (331)
T ss_dssp S----CEEEEEEECSSCCCCEEECT-TSSEEEEC---CCSSSSCEEEEEET--TTTEEEEEEECC-TTEEEEEECTTSSC
T ss_pred c----eeEEecccCCCCccceEECC-CCCEEEEe---cCCCCcccEEEEEC--CCCCeEEEEECC-CCccceEECCCCCE
Confidence 2 11556666666655599999 99999853 233 3 9999998 456667777644 45689999999997
Q ss_pred hhc
Q 000080 2381 ALS 2383 (2389)
Q Consensus 2381 ~~s 2383 (2389)
++.
T Consensus 142 l~~ 144 (331)
T 3u4y_A 142 LIL 144 (331)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.06 E-value=2.4e-10 Score=141.16 Aligned_cols=134 Identities=14% Similarity=0.056 Sum_probs=104.5
Q ss_pred EEEEEcCCCC--eEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC----CcEE
Q 000080 2223 RAFSSHPLRP--FFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD----GTVC 2296 (2389)
Q Consensus 2223 rsVAFsPdG~--~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D----gTVk 2296 (2389)
+..+|+|||+ .+++++.|+++ |||+.+|+..+... + + . .+++|||||++||+++.| ++|+
T Consensus 113 ~~~~~s~dg~~~~~~s~~~~~~~-l~d~~~g~~~~l~~----~------~-~--~~~~~spDG~~la~~~~~~~~~~~i~ 178 (582)
T 3o4h_A 113 RILSGVDTGEAVVFTGATEDRVA-LYALDGGGLRELAR----L------P-G--FGFVSDIRGDLIAGLGFFGGGRVSLF 178 (582)
T ss_dssp EEEEEEECSSCEEEEEECSSCEE-EEEEETTEEEEEEE----E------S-S--CEEEEEEETTEEEEEEEEETTEEEEE
T ss_pred eeeeeCCCCCeEEEEecCCCCce-EEEccCCcEEEeec----C------C-C--ceEEECCCCCEEEEEEEcCCCCeEEE
Confidence 3457788775 56666666655 99999887655442 1 1 2 889999999999999988 8899
Q ss_pred EeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCC--eEEEeeCCCCCCCceEEEEeecCcEEEEe-
Q 000080 2297 TWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGI--NVVVWDTLAPPTSSRASITCHEGLYDLFL- 2373 (2389)
Q Consensus 2297 LWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~--TVrLWD~l~~tg~~v~sL~GH~~~V~svA- 2373 (2389)
+||++++. ...+.+|.+.+.+++||| ||+.||++ ..|+ +|++||+ .+++.. .+.+|...+..++
T Consensus 179 ~~d~~~g~------~~~l~~~~~~~~~~~~Sp-DG~~l~~~---~~~~~~~i~~~d~--~~~~~~-~~~~~~~~~~~~~~ 245 (582)
T 3o4h_A 179 TSNLSSGG------LRVFDSGEGSFSSASISP-GMKVTAGL---ETAREARLVTVDP--RDGSVE-DLELPSKDFSSYRP 245 (582)
T ss_dssp EEETTTCC------CEEECCSSCEEEEEEECT-TSCEEEEE---ECSSCEEEEEECT--TTCCEE-ECCCSCSHHHHHCC
T ss_pred EEcCCCCC------ceEeecCCCccccceECC-CCCEEEEc---cCCCeeEEEEEcC--CCCcEE-EccCCCcChhhhhh
Confidence 99999862 346778999999999999 99999964 4677 8999997 455555 7788998888888
Q ss_pred -------ecccchhhhc
Q 000080 2374 -------PLKLLNFALS 2383 (2389)
Q Consensus 2374 -------~~~~~~~~~s 2383 (2389)
++|+|..+.+
T Consensus 246 ~~~~~~~~spdg~~~~~ 262 (582)
T 3o4h_A 246 TAITWLGYLPDGRLAVV 262 (582)
T ss_dssp SEEEEEEECTTSCEEEE
T ss_pred ccccceeEcCCCcEEEE
Confidence 9999954443
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.05 E-value=3.4e-10 Score=142.40 Aligned_cols=141 Identities=10% Similarity=0.005 Sum_probs=102.5
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.|.+++|||| +.++.+ .|++|++||+.+++...... +...+.+++|||||++||++ .|++|++||+
T Consensus 83 ~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~-----------~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~ 148 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFD-----------TNEETASLDFSPVGDRVAYV-RNHNLYIARG 148 (706)
T ss_dssp CCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEEC-----------CTTCCTTCEECTTSSEEEEE-ETTEEEEEEC
T ss_pred CceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEccC-----------CcccccCCcCCCCCCEEEEE-ECCeEEEEec
Confidence 4589999999 655554 45999999998887655432 23558889999999999995 6899999999
Q ss_pred CC-----CCccCcccceeeeecCC--------------CeeEEEEecCCCCEEEEeecC---------------------
Q 000080 2301 EV-----GGRSNVRPMESCLCFSS--------------HAMDVSYITSSGSVIAAAGHS--------------------- 2340 (2389)
Q Consensus 2301 ~t-----ggrs~~k~l~tl~gHs~--------------~V~sVAFSP~DGslLASAG~s--------------------- 2340 (2389)
.+ +. .......+.. .+.+++||| ||+.||+++..
T Consensus 149 ~~~~~~~g~-----~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 222 (706)
T 2z3z_A 149 GKLGEGMSR-----AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP 222 (706)
T ss_dssp BCTTSCCCC-----CEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEE
T ss_pred CcccccCCC-----cEEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEE
Confidence 87 62 2221122222 247899999 99999987411
Q ss_pred ---------CCCCeEEEeeCCCCCCCceEEE--EeecCcEEEEeecccchhhhc
Q 000080 2341 ---------SNGINVVVWDTLAPPTSSRASI--TCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2341 ---------S~D~TVrLWD~l~~tg~~v~sL--~GH~~~V~svA~~~~~~~~~s 2383 (2389)
..+.+|++||+ .+++..... ..|...+.+++++|+|++++.
T Consensus 223 ~~y~~~g~~~~~~~l~~~d~--~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 274 (706)
T 2z3z_A 223 LYYPMAGTPSHHVTVGIYHL--ATGKTVYLQTGEPKEKFLTNLSWSPDENILYV 274 (706)
T ss_dssp ECCCBTTSCCCEEEEEEEET--TTTEEEECCCCSCTTCEEEEEEECTTSSEEEE
T ss_pred eeCCCCCCCCCeeEEEEEEC--CCCceEeeccCCCCceeEeeEEEECCCCEEEE
Confidence 14578999998 344433322 257788999999999998765
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.03 E-value=6.7e-10 Score=125.12 Aligned_cols=137 Identities=7% Similarity=-0.019 Sum_probs=101.2
Q ss_pred EEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEE-EEEeCCCcEEEeeCCCC
Q 000080 2225 FSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRF-ASAALDGTVCTWQLEVG 2303 (2389)
Q Consensus 2225 VAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~L-ASgS~DgTVkLWDl~tg 2303 (2389)
+++++++.++++++.|++|++||..+++.+.++.. + ....+..++|+|||+++ ++++.+++|.+||++++
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~---~------~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM---P------DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC 75 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC---S------SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec---C------CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC
Confidence 47899999999999999999999999998887741 1 11246899999999865 56668999999999986
Q ss_pred CccCcccceeee-ec-----CCCeeEEEEecCCCCEEEEeecC---------CCCCeEEEeeCCCCCC---CceEEEEee
Q 000080 2304 GRSNVRPMESCL-CF-----SSHAMDVSYITSSGSVIAAAGHS---------SNGINVVVWDTLAPPT---SSRASITCH 2365 (2389)
Q Consensus 2304 grs~~k~l~tl~-gH-----s~~V~sVAFSP~DGslLASAG~s---------S~D~TVrLWD~l~~tg---~~v~sL~GH 2365 (2389)
+....+. ++ ...+.+++|+| ||++|++++.. ..+++|.+||+ .++ +.+..+. +
T Consensus 76 -----~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~-~ 146 (349)
T 1jmx_B 76 -----KNTFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFST--ADGLEAKPVRTFP-M 146 (349)
T ss_dssp -----EEEEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEG--GGGGGBCCSEEEE-C
T ss_pred -----cEEEEEEcccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEEC--CCccccceeeecc-C
Confidence 2333333 22 22367899999 99999986410 01489999997 332 2244555 4
Q ss_pred cCcEEEEeecccch
Q 000080 2366 EGLYDLFLPLKLLN 2379 (2389)
Q Consensus 2366 ~~~V~svA~~~~~~ 2379 (2389)
...+.+++++|+|+
T Consensus 147 ~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 147 PRQVYLMRAADDGS 160 (349)
T ss_dssp CSSCCCEEECTTSC
T ss_pred CCcccceeECCCCc
Confidence 45789999999998
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.02 E-value=2.2e-09 Score=125.52 Aligned_cols=148 Identities=12% Similarity=0.007 Sum_probs=103.9
Q ss_pred EEEcCCCC--eEEEEe-------------CCCcEEEeecC-CCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEE
Q 000080 2225 FSSHPLRP--FFLVGS-------------SNTHIYLWEFG-KDKATATYGVLPAANVPPPYALASISALQFDHYGHRFAS 2288 (2389)
Q Consensus 2225 VAFsPdG~--~LASGS-------------~DgTIRLWDl~-tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LAS 2288 (2389)
++|+|||+ ++++++ .|+++++|++. +|+...++..++ + .+...+.+++|||||++|++
T Consensus 88 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~-~-----~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 88 NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE-Y-----QENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE-C-----CTTCCEEEEEECTTSSEEEE
T ss_pred EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEE-e-----CCCCcceEEEECCCCCEEEE
Confidence 58999999 455653 79999999997 576554443111 1 12356999999999998887
Q ss_pred Ee-CCCcEEEeeCC-CCCccCcccceeee--ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCce---EE
Q 000080 2289 AA-LDGTVCTWQLE-VGGRSNVRPMESCL--CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSR---AS 2361 (2389)
Q Consensus 2289 gS-~DgTVkLWDl~-tggrs~~k~l~tl~--gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v---~s 2361 (2389)
++ .+++|++||++ ++. ...+..+. .|...++.++|+| ||++|++++ ..+++|++|++...+++.. +.
T Consensus 162 ~~~~~~~v~~~~~~~~g~---~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~--~~~~~v~v~~~~~~~g~~~~~~~~ 235 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGE---VELVGSVDAPDPGDHPRWVAMHP-TGNYLYALM--EAGNRICEYVIDPATHMPVYTHHS 235 (365)
T ss_dssp EETTTTEEEEEEECTTSC---EEEEEEEECSSTTCCEEEEEECT-TSSEEEEEE--TTTTEEEEEEECTTTCCEEEEEEE
T ss_pred EcCCCCEEEEEEECCCCC---EEEeeeEecCCCCCCCCEeEECC-CCCEEEEEE--CCCCeEEEEEEeCCCCcEEEccce
Confidence 76 47899999998 652 12233333 2466789999999 999988764 4678999998743345432 22
Q ss_pred EE-------eecC------cEEEEe-ecccchhhhcc
Q 000080 2362 IT-------CHEG------LYDLFL-PLKLLNFALSK 2384 (2389)
Q Consensus 2362 L~-------GH~~------~V~svA-~~~~~~~~~s~ 2384 (2389)
+. +|.+ .+..++ ++|+|+++..-
T Consensus 236 ~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~ 272 (365)
T 1jof_A 236 FPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFAS 272 (365)
T ss_dssp EESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred EEcCCCCcCCcccccccccccccEEEECCCCCEEEEE
Confidence 32 2333 588999 99999987543
No 159
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.02 E-value=1.1e-09 Score=137.90 Aligned_cols=150 Identities=11% Similarity=0.024 Sum_probs=110.5
Q ss_pred eeEEEEEEcCCCCeEEEEeCCC-----cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECC--CCCEEEEEeCC
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSNT-----HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDH--YGHRFASAALD 2292 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~Dg-----TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSP--DG~~LASgS~D 2292 (2389)
..+++++|+|||++|++++.|+ +|++||+.+|+...++.. +.+ .+....+.+++|+| ||+++++++.|
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~-~~~----~~~~~~~~~~~~sp~~dg~~l~~~~~~ 332 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV-ETD----KHYVEPLHPLTFLPGSNNQFIWQSRRD 332 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE-EEC----SSCCCCCSCCEECTTCSSEEEEEECTT
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE-ccC----CCeECccCCceeecCCCCEEEEEEccC
Confidence 3568999999999999988876 999999999944444321 111 11112357889999 99999999999
Q ss_pred CcEEEeeCCCCCccCcccceeeeecCCCeeE-EEEecCCCCEEEEeecCCCCC----eEEEeeCCCCCCCceEEEEeecC
Q 000080 2293 GTVCTWQLEVGGRSNVRPMESCLCFSSHAMD-VSYITSSGSVIAAAGHSSNGI----NVVVWDTLAPPTSSRASITCHEG 2367 (2389)
Q Consensus 2293 gTVkLWDl~tggrs~~k~l~tl~gHs~~V~s-VAFSP~DGslLASAG~sS~D~----TVrLWD~l~~tg~~v~sL~GH~~ 2367 (2389)
++++||++...+ .....+..|...+.+ ++|+| ||+.|+.++ +.++ .|..||+ .+++ +..+. |..
T Consensus 333 g~~~l~~~~~~~----~~~~~l~~~~~~v~~~~~~sp-dg~~l~~~~--~~~~~~~~~l~~~d~--~~~~-~~~l~-~~~ 401 (706)
T 2z3z_A 333 GWNHLYLYDTTG----RLIRQVTKGEWEVTNFAGFDP-KGTRLYFES--TEASPLERHFYCIDI--KGGK-TKDLT-PES 401 (706)
T ss_dssp SSCEEEEEETTS----CEEEECCCSSSCEEEEEEECT-TSSEEEEEE--SSSCTTCBEEEEEET--TCCC-CEESC-CSS
T ss_pred CccEEEEEECCC----CEEEecCCCCeEEEeeeEEcC-CCCEEEEEe--cCCCCceEEEEEEEc--CCCC-ceecc-CCC
Confidence 999999887322 345667778888887 89999 898887764 3444 5666665 3333 55555 788
Q ss_pred cEEEEeecccchhhhccc
Q 000080 2368 LYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2368 ~V~svA~~~~~~~~~s~~ 2385 (2389)
.+.+++++|+|++++..|
T Consensus 402 ~~~~~~~spdg~~l~~~~ 419 (706)
T 2z3z_A 402 GMHRTQLSPDGSAIIDIF 419 (706)
T ss_dssp SEEEEEECTTSSEEEEEE
T ss_pred ceEEEEECCCCCEEEEEe
Confidence 899999999999887654
No 160
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.00 E-value=2e-09 Score=120.40 Aligned_cols=139 Identities=9% Similarity=-0.003 Sum_probs=102.8
Q ss_pred EEEEEcCCCCeEEEEe------------CCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe
Q 000080 2223 RAFSSHPLRPFFLVGS------------SNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA 2290 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS------------~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS 2290 (2389)
..++|+|||++|++++ .|++|++||+.+++.+..+.. ...+.+++|+|||++|+++
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-----------~~~~~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-----------PRQITMLAWARDGSKLYGL- 152 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-----------CSSCCCEEECTTSSCEEEE-
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-----------CCCcceeEECCCCCEEEEe-
Confidence 5579999999988886 689999999999888777641 1346789999999988888
Q ss_pred CCCcEEEeeCCCCCcc-----C--ccc-----------------------------------------------------
Q 000080 2291 LDGTVCTWQLEVGGRS-----N--VRP----------------------------------------------------- 2310 (2389)
Q Consensus 2291 ~DgTVkLWDl~tggrs-----~--~k~----------------------------------------------------- 2310 (2389)
++.|++||++++... . ..+
T Consensus 153 -~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 231 (337)
T 1pby_B 153 -GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp -SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred -CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence 689999999875210 0 000
Q ss_pred -ceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhc
Q 000080 2311 -MESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2311 -l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s 2383 (2389)
...+..|...+.+++|+| ||++|+++ |++|++||+ .+++.++.+.. ...+.+++++|+|++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~s~-dg~~l~~~-----~~~v~~~d~--~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~ 296 (337)
T 1pby_B 232 AMREVRIMDVFYFSTAVNP-AKTRAFGA-----YNVLESFDL--EKNASIKRVPL-PHSYYSVNVSTDGSTVWL 296 (337)
T ss_dssp EEEEEEECSSCEEEEEECT-TSSEEEEE-----ESEEEEEET--TTTEEEEEEEC-SSCCCEEEECTTSCEEEE
T ss_pred eEeecCCCCCceeeEEECC-CCCEEEEe-----CCeEEEEEC--CCCcCcceecC-CCceeeEEECCCCCEEEE
Confidence 001122334566799999 99999874 589999997 45666677764 356789999999997654
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.98 E-value=9.1e-10 Score=128.77 Aligned_cols=146 Identities=8% Similarity=-0.020 Sum_probs=102.4
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecC-CCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCE--EEEEe---------
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFG-KDKATATYGVLPAANVPPPYALASISALQFDHYGHR--FASAA--------- 2290 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~-tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~--LASgS--------- 2290 (2389)
..++|+|||++|++++.+ +|++||+. +|+.+..... +. .| .+..++|+|||++ +++++
T Consensus 43 ~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~-~~-----~g---~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 43 SWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH-PI-----GG---HPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp SEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE-EC-----CS---SGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred cEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe-ec-----CC---CCccEEECCCCCEEEEEEecCCcceeccc
Confidence 667999999999999988 99999997 7876544321 11 11 2455899999994 55653
Q ss_pred ----CCCcEEEeeCCCCCccCcccceeee-ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc--eEEEE
Q 000080 2291 ----LDGTVCTWQLEVGGRSNVRPMESCL-CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS--RASIT 2363 (2389)
Q Consensus 2291 ----~DgTVkLWDl~tggrs~~k~l~tl~-gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~--v~sL~ 2363 (2389)
.||++++|++...++ ....+..+. .+...+.+++|+| ||++|+++. ..+++|++||+. ++++. +..+.
T Consensus 113 ~~~~~~g~v~v~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~--~~~~~v~~~~~~-~~g~~~~~~~~~ 187 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGK-LEKNVQNYEYQENTGIHGMVFDP-TETYLYSAD--LTANKLWTHRKL-ASGEVELVGSVD 187 (365)
T ss_dssp EESSSCCEEEEEEECTTCC-EEEEEEEEECCTTCCEEEEEECT-TSSEEEEEE--TTTTEEEEEEEC-TTSCEEEEEEEE
T ss_pred eeecCCceEEEEccCCCCc-CcceEeeEEeCCCCcceEEEECC-CCCEEEEEc--CCCCEEEEEEEC-CCCCEEEeeeEe
Confidence 799999999974321 111111111 2557899999999 999888763 356799999983 14443 23444
Q ss_pred e--ecCcEEEEeecccchhhhc
Q 000080 2364 C--HEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2364 G--H~~~V~svA~~~~~~~~~s 2383 (2389)
. |..+++.++++|+|+++..
T Consensus 188 ~~~~g~~p~~~~~spdg~~l~v 209 (365)
T 1jof_A 188 APDPGDHPRWVAMHPTGNYLYA 209 (365)
T ss_dssp CSSTTCCEEEEEECTTSSEEEE
T ss_pred cCCCCCCCCEeEECCCCCEEEE
Confidence 2 4567999999999998754
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.95 E-value=2.7e-09 Score=136.99 Aligned_cols=139 Identities=12% Similarity=0.069 Sum_probs=100.4
Q ss_pred EEEEEcCCCCeEEEEeCC---------CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCC
Q 000080 2223 RAFSSHPLRPFFLVGSSN---------THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDG 2293 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~D---------gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~Dg 2293 (2389)
.+++|||||++||.++.| +.+.+||+.+|++.+ +. +|...+..++|||||++||.++ |+
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~----------~~~~~~~~~~~SPdG~~la~~~-~~ 132 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EE----------RIPNNTQWVTWSPVGHKLAYVW-NN 132 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SS----------CCCTTEEEEEECSSTTCEEEEE-TT
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-cc----------cCCCcceeeEECCCCCEEEEEE-CC
Confidence 457999999999999987 455699999988643 31 2346799999999999999995 68
Q ss_pred cEEEeeCCCCCccCcccceeeeecCCCe-----------------eEEEEecCCCCEEEEeecCCCCC------------
Q 000080 2294 TVCTWQLEVGGRSNVRPMESCLCFSSHA-----------------MDVSYITSSGSVIAAAGHSSNGI------------ 2344 (2389)
Q Consensus 2294 TVkLWDl~tggrs~~k~l~tl~gHs~~V-----------------~sVAFSP~DGslLASAG~sS~D~------------ 2344 (2389)
.|++||+.++.. +. .+..++...+ .+++||| ||+.||.+.. ++.
T Consensus 133 ~i~~~~~~~~~~---~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~--d~~~v~~~~~~~~~~ 205 (740)
T 4a5s_A 133 DIYVKIEPNLPS---YR-ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQF--NDTEVPLIEYSFYSD 205 (740)
T ss_dssp EEEEESSTTSCC---EE-CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEE--ECTTCCEEEEEECCS
T ss_pred eEEEEECCCCce---EE-EcCCCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEE--cccCCceEEEEeecC
Confidence 999999987631 11 1223333222 3489999 9999998631 111
Q ss_pred -----------------------eEEEeeCCCCC---CC--ceEEEE------eecCcEEEEeecccchhhh
Q 000080 2345 -----------------------NVVVWDTLAPP---TS--SRASIT------CHEGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2345 -----------------------TVrLWD~l~~t---g~--~v~sL~------GH~~~V~svA~~~~~~~~~ 2382 (2389)
+|+|||+ .+ ++ ....+. +|...+..++.+|+|++++
T Consensus 206 ~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~ 275 (740)
T 4a5s_A 206 ESLQYPKTVRVPYPKAGAVNPTVKFFVVNT--DSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISL 275 (740)
T ss_dssp TTCSSCEEEEEECCBTTSCCCEEEEEEEET--TSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEE
T ss_pred CCCCCCcceeecCCCCcCcCCeeEEEEEEC--CCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEE
Confidence 5788887 34 42 344554 3888899999999999644
No 163
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.94 E-value=2.7e-09 Score=119.33 Aligned_cols=134 Identities=9% Similarity=0.046 Sum_probs=98.8
Q ss_pred CeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCC-CEEEEEECCCCCEE-EEEeCCCcEEEeeCCCCCccCcc
Q 000080 2232 PFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALA-SISALQFDHYGHRF-ASAALDGTVCTWQLEVGGRSNVR 2309 (2389)
Q Consensus 2232 ~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~-~V~sVaFSPDG~~L-ASgS~DgTVkLWDl~tggrs~~k 2309 (2389)
++|++++.|++|++||..+++.+.++.. ++.. .+..++|+|||+.+ ++++.+++|.+||+.++.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~---------~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~----- 67 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITI---------ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE----- 67 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEEC---------TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC-----
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEc---------CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC-----
Confidence 4799999999999999999998877641 1112 37889999999765 666778999999999863
Q ss_pred cceeee-ec----CCCeeEEEEecCCCCEEEEeecCC---------CCCeEEEeeCCCCCCCceEEEEeecCcEEEEeec
Q 000080 2310 PMESCL-CF----SSHAMDVSYITSSGSVIAAAGHSS---------NGINVVVWDTLAPPTSSRASITCHEGLYDLFLPL 2375 (2389)
Q Consensus 2310 ~l~tl~-gH----s~~V~sVAFSP~DGslLASAG~sS---------~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~ 2375 (2389)
.+..+. ++ ...+.+++|+| ||+.|++++.+. .|+.|++||+ .+++.++.+.. ...+.+++++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~--~~~~~~~~~~~-~~~~~~~~~s 143 (337)
T 1pby_B 68 TLGRIDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDA--ETLSRRKAFEA-PRQITMLAWA 143 (337)
T ss_dssp EEEEEECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEET--TTTEEEEEEEC-CSSCCCEEEC
T ss_pred eEeeEEcCCcccccccccceEECC-CCCEEEEEecccccccccccccCceEEEEEC--CCCcEEEEEeC-CCCcceeEEC
Confidence 333332 12 22567899999 999888762100 4799999997 45566666664 4568889999
Q ss_pred ccchhhhc
Q 000080 2376 KLLNFALS 2383 (2389)
Q Consensus 2376 ~~~~~~~s 2383 (2389)
|+|++++.
T Consensus 144 ~dg~~l~~ 151 (337)
T 1pby_B 144 RDGSKLYG 151 (337)
T ss_dssp TTSSCEEE
T ss_pred CCCCEEEE
Confidence 99997653
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.90 E-value=2.3e-09 Score=133.96 Aligned_cols=146 Identities=13% Similarity=0.024 Sum_probs=100.9
Q ss_pred eeEEEEEEcCCCCeEEEEeCC----------CcEEEeecCC------CceeeEecccCCCCCCCCCCCCCEEEEEECCCC
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSN----------THIYLWEFGK------DKATATYGVLPAANVPPPYALASISALQFDHYG 2283 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~D----------gTIRLWDl~t------Gk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG 2283 (2389)
..+.+++|+|||+.|++++.| .+|++||+.+ ++. ..+. .. +...+.+++|||||
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~--~~-------~~~~~~~~~~SpDG 199 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELS--DD-------AHRFVTGPRLSPDG 199 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESS--CS-------CSSEECCCEECTTS
T ss_pred ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEE--ec-------CCCcccCceECCCC
Confidence 456899999999999999988 6999999987 543 3331 01 23678899999999
Q ss_pred CEEEEEeCCC--------cEEEeeCC-CCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCC--eEEEeeCC
Q 000080 2284 HRFASAALDG--------TVCTWQLE-VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGI--NVVVWDTL 2352 (2389)
Q Consensus 2284 ~~LASgS~Dg--------TVkLWDl~-tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~--TVrLWD~l 2352 (2389)
++||.++.|+ +|++||++ ++. .........+|...+.+++|+| ||++++++ +.|+ +|.+||+
T Consensus 200 ~~la~~~~~~~~~~~~~~~i~~~d~~~~g~--~~~~~~l~~~~~~~~~~~~~sp-dg~l~~~~---~~~~~~~l~~~~~- 272 (662)
T 3azo_A 200 RQAVWLAWDHPRMPWEGTELKTARVTEDGR--FADTRTLLGGPEEAIAQAEWAP-DGSLIVAT---DRTGWWNLHRVDP- 272 (662)
T ss_dssp SEEEEEEECTTCCTTTCEEEEEEEECTTSC--EEEEEEEEEETTBCEEEEEECT-TSCEEEEE---CTTSSCEEEEECT-
T ss_pred CEEEEEECCCCCCCCCCcEEEEEEECCCCc--ccccEEeCCCCCceEcceEECC-CCeEEEEE---CCCCCeEEEEEEC-
Confidence 9999988664 79999998 441 0012222345678899999999 99977765 4667 4555554
Q ss_pred CCCCCceEEEEeecCc--------EEEEeecccchhhhc
Q 000080 2353 APPTSSRASITCHEGL--------YDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2353 ~~tg~~v~sL~GH~~~--------V~svA~~~~~~~~~s 2383 (2389)
.+++..+.+.+|... +.+++++++|+.+.+
T Consensus 273 -~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~ 310 (662)
T 3azo_A 273 -ATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVV 310 (662)
T ss_dssp -TTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEE
T ss_pred -CCCceeecccccccccCccccccCceEeEeCCCEEEEE
Confidence 344433333333322 457888888876654
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.88 E-value=7.7e-09 Score=119.41 Aligned_cols=139 Identities=6% Similarity=-0.136 Sum_probs=102.6
Q ss_pred EEEcCCCCeEEEEeC-CCc--EEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2225 FSSHPLRPFFLVGSS-NTH--IYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2225 VAFsPdG~~LASGS~-DgT--IRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
.+|+|||++||.++. |++ |.+||+.+|+..+... +|...+..++|||||++||.++.|++|++||+.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~----------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~ 110 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE----------GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLA 110 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC----------SSCBCSSSCEECTTSSEEEEEETTTEEEEEETT
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee----------CCCCCccceEEcCCCCEEEEEeCCCeEEEEECC
Confidence 589999999999988 774 8888998887665431 233445567899999999999999999999999
Q ss_pred CCCccCcccceeeeecCCCeeEEE--EecCCCCEEEEee-------------------cCCCCCeEEEeeCCCCCCCceE
Q 000080 2302 VGGRSNVRPMESCLCFSSHAMDVS--YITSSGSVIAAAG-------------------HSSNGINVVVWDTLAPPTSSRA 2360 (2389)
Q Consensus 2302 tggrs~~k~l~tl~gHs~~V~sVA--FSP~DGslLASAG-------------------~sS~D~TVrLWD~l~~tg~~v~ 2360 (2389)
++. .......+...+.... ++| ||++|+... ....+..|.+||+ .++ .+.
T Consensus 111 ~g~-----~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~--~~g-~~~ 181 (388)
T 3pe7_A 111 TLE-----ENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL--KTG-EST 181 (388)
T ss_dssp TCC-----EEEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET--TTC-CEE
T ss_pred CCc-----ceeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEEC--CCC-ceE
Confidence 873 2223344555554444 477 999998421 0124578999997 344 467
Q ss_pred EEEeecCcEEEEeecc-cchhhh
Q 000080 2361 SITCHEGLYDLFLPLK-LLNFAL 2382 (2389)
Q Consensus 2361 sL~GH~~~V~svA~~~-~~~~~~ 2382 (2389)
.+..|...+..++++| +|++++
T Consensus 182 ~l~~~~~~~~~~~~sp~dg~~l~ 204 (388)
T 3pe7_A 182 VILQENQWLGHPIYRPYDDSTVA 204 (388)
T ss_dssp EEEEESSCEEEEEEETTEEEEEE
T ss_pred EeecCCccccccEECCCCCCEEE
Confidence 7778889999999999 998765
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.86 E-value=9e-09 Score=115.95 Aligned_cols=126 Identities=12% Similarity=0.136 Sum_probs=88.7
Q ss_pred EEEEEEcCCCCe-EEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC--------
Q 000080 2222 TRAFSSHPLRPF-FLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD-------- 2292 (2389)
Q Consensus 2222 VrsVAFsPdG~~-LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D-------- 2292 (2389)
+..++|+|||++ +++++.+++|++||+.+++.+.++.. ++. +..+...+..++|+|||++|++++.|
T Consensus 45 ~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~--~~~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL--SSV--PGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp SCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES--CCS--TTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc--ccc--cccccccccceEECCCCCEEEEEccccccccccc
Confidence 367899999985 45667899999999999988776641 110 00002347889999999999999976
Q ss_pred ----CcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE
Q 000080 2293 ----GTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT 2363 (2389)
Q Consensus 2293 ----gTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~ 2363 (2389)
++|.+||++++. ..+.+.... +...+.+++|+| ||++++ ++ . .|++||+ .+++.+..+.
T Consensus 121 ~~~~~~i~~~d~~~~~--~~~~~~~~~-~~~~~~~~~~s~-dg~l~~-~~---~--~i~~~d~--~~~~~~~~~~ 183 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGL--EAKPVRTFP-MPRQVYLMRAAD-DGSLYV-AG---P--DIYKMDV--KTGKYTVALP 183 (349)
T ss_dssp EECCCEEEEEEGGGGG--GBCCSEEEE-CCSSCCCEEECT-TSCEEE-ES---S--SEEEECT--TTCCEEEEEC
T ss_pred ccCCCeEEEEECCCcc--ccceeeecc-CCCcccceeECC-CCcEEE-cc---C--cEEEEeC--CCCceecccc
Confidence 999999998852 113333433 445688999999 889554 32 2 3999997 4555555554
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.83 E-value=7.4e-08 Score=107.63 Aligned_cols=140 Identities=9% Similarity=0.100 Sum_probs=110.1
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
++.|+++|+|+++++.+.++.|++||. +|+.+.++.. .++...++.|+|+|+|+.+++.+.+++|++||.+
T Consensus 123 ~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~--------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 123 PRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGC--------SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEEC--------TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCC--------CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence 488999999999999889999999996 5777766631 1234678999999999999999999999999985
Q ss_pred CCCccCcccceeeee--cCCCeeEEEEecCCCCEEEEeecCCCCC-eEEEeeCCCCCCCceEEEEeecC--cEEEEeecc
Q 000080 2302 VGGRSNVRPMESCLC--FSSHAMDVSYITSSGSVIAAAGHSSNGI-NVVVWDTLAPPTSSRASITCHEG--LYDLFLPLK 2376 (2389)
Q Consensus 2302 tggrs~~k~l~tl~g--Hs~~V~sVAFSP~DGslLASAG~sS~D~-TVrLWD~l~~tg~~v~sL~GH~~--~V~svA~~~ 2376 (2389)
. +.+.++.. +...+.+++++| +|+++++. ..++ .|++||. .++.+..+..|.. .+..++.++
T Consensus 194 g------~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~---~~~~~~i~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 194 G------QYLRQIGGEGITNYPIGVGINS-NGEILIAD---NHNNFNLTIFTQ---DGQLISALESKVKHAQCFDVALMD 260 (286)
T ss_dssp C------CEEEEESCTTTSCSEEEEEECT-TCCEEEEE---CSSSCEEEEECT---TSCEEEEEEESSCCSCEEEEEEET
T ss_pred C------CEEEEEccCCccCCCcEEEECC-CCCEEEEe---CCCCEEEEEECC---CCCEEEEEcccCCCCcceeEEECC
Confidence 3 23334433 336788999999 89998875 3554 9999995 5777888877654 377999999
Q ss_pred cchhhhc
Q 000080 2377 LLNFALS 2383 (2389)
Q Consensus 2377 ~~~~~~s 2383 (2389)
+|+..++
T Consensus 261 ~g~l~vs 267 (286)
T 1q7f_A 261 DGSVVLA 267 (286)
T ss_dssp TTEEEEE
T ss_pred CCcEEEE
Confidence 9987665
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.82 E-value=1e-07 Score=110.47 Aligned_cols=144 Identities=9% Similarity=0.058 Sum_probs=111.4
Q ss_pred eEEEEEEcCCCCeEEEEeCC------------------------CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEE
Q 000080 2221 STRAFSSHPLRPFFLVGSSN------------------------THIYLWEFGKDKATATYGVLPAANVPPPYALASISA 2276 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~D------------------------gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~s 2276 (2389)
.+.+|+++|+|+++++++.+ ++|++||..+|+.+..+. .++......
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~---------~~~~~~p~g 95 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG---------KNLFYLPHG 95 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC---------TTTCSSEEE
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC---------CCccCCceE
Confidence 35899999999999999888 589999998899877663 134567899
Q ss_pred EEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceee---------eecCCCeeEEEEecCCCCEEEEeecCC-CCCeE
Q 000080 2277 LQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESC---------LCFSSHAMDVSYITSSGSVIAAAGHSS-NGINV 2346 (2389)
Q Consensus 2277 VaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl---------~gHs~~V~sVAFSP~DGslLASAG~sS-~D~TV 2346 (2389)
|+|+|+|+.+++.+.+++|+.||..... ..+.++ .++-....+|+|+|.+|.++++. + .++.|
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~----~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d---~~~~~~I 168 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKE----GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSD---GYCNSRI 168 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSS----CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEE---CSSCCEE
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCe----EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEe---CCCCCeE
Confidence 9999999999999999999999986421 234444 34555788999999678988874 3 58899
Q ss_pred EEeeCCCCCCCceEEEEee----------cCcEEEEeeccc-chhhhc
Q 000080 2347 VVWDTLAPPTSSRASITCH----------EGLYDLFLPLKL-LNFALS 2383 (2389)
Q Consensus 2347 rLWD~l~~tg~~v~sL~GH----------~~~V~svA~~~~-~~~~~s 2383 (2389)
++||. .++.+..+... -.....++++++ |+..++
T Consensus 169 ~~~~~---~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~ 213 (329)
T 3fvz_A 169 VQFSP---SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA 213 (329)
T ss_dssp EEECT---TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE
T ss_pred EEEcC---CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE
Confidence 99994 57777777533 334889999998 554443
No 169
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.78 E-value=3e-08 Score=126.57 Aligned_cols=146 Identities=10% Similarity=-0.057 Sum_probs=105.8
Q ss_pred eEEEEEEcCCCCeEEEEeCCC-----cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCc-
Q 000080 2221 STRAFSSHPLRPFFLVGSSNT-----HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGT- 2294 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~Dg-----TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgT- 2294 (2389)
.+.+++|||||++||.+++++ +|++||+.+|+.+.... + + ..+.+++|||||+.|+.++.|++
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~--~--------~-~~~~~~~wspDg~~l~~~~~~~~~ 194 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL--E--------R-VKFSCMAWTHDGKGMFYNAYPQQD 194 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE--E--------E-ECSCCEEECTTSSEEEEEECCCCS
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc--c--------C-cccceEEEEeCCCEEEEEEECCcc
Confidence 357889999999999877654 99999999998765321 1 1 22678999999999999999887
Q ss_pred ---------------EEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCC--CCeEEEeeCCCCC--
Q 000080 2295 ---------------VCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSN--GINVVVWDTLAPP-- 2355 (2389)
Q Consensus 2295 ---------------VkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~--D~TVrLWD~l~~t-- 2355 (2389)
|++|++.++. .....+.....|...+.+++|+| ||++|+.++..+. +..|.+||+. +
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~-~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~--~~~ 270 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQ-SEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQ--QES 270 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCG-GGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGG--GSS
T ss_pred ccccccccccCCCCEEEEEECCCCc-ccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECc--ccc
Confidence 9999998862 11112223333566788999999 9999987642121 6789999973 2
Q ss_pred ----CC-ceEEEEeecCcEEEEeecccchhhh
Q 000080 2356 ----TS-SRASITCHEGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2356 ----g~-~v~sL~GH~~~V~svA~~~~~~~~~ 2382 (2389)
++ ..+.|..|...+.. ..+++|++++
T Consensus 271 ~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~ 301 (710)
T 2xdw_A 271 NGITGILKWVKLIDNFEGEYD-YVTNEGTVFT 301 (710)
T ss_dssp SSSCSSCCCEEEECSSSSCEE-EEEEETTEEE
T ss_pred cccCCccceEEeeCCCCcEEE-EEeccCCEEE
Confidence 22 47888888877765 3677777654
No 170
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.77 E-value=1.8e-08 Score=128.37 Aligned_cols=142 Identities=6% Similarity=-0.113 Sum_probs=99.6
Q ss_pred eEEEEEEcCCCCeEE-----EEeCCCcEEEeecCCCcee-eEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCc
Q 000080 2221 STRAFSSHPLRPFFL-----VGSSNTHIYLWEFGKDKAT-ATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGT 2294 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LA-----SGS~DgTIRLWDl~tGk~l-~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgT 2294 (2389)
.+.+++|||||++|| +|+++.+|++||+.+|+.+ ..- ++ + .....++|||||+.|+.++.|.+
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~--~~-------~--~~~~~~~wspDg~~l~~~~~d~~ 190 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV--IE-------G--GKYATPKWTPDSKGFYYEWLPTD 190 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC--BS-------C--CTTCCCEECTTSSEEEEEECCCC
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc--cC-------c--ccccceEEecCCCEEEEEEecCC
Confidence 458889999999999 7777889999999998864 211 11 1 11268999999999999999988
Q ss_pred -------------EEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCC-CCCeEEEeeCCCCCCCceE
Q 000080 2295 -------------VCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSS-NGINVVVWDTLAPPTSSRA 2360 (2389)
Q Consensus 2295 -------------VkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS-~D~TVrLWD~l~~tg~~v~ 2360 (2389)
|++|++.++. .....+.....|...+.+++|+| ||++||.++... ....|.+||. + +...+
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~-~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~--~-~~~~~ 265 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEP-SKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRP--G-EKDFR 265 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCG-GGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECT--T-CSSCE
T ss_pred CCCccccCCCCCEEEEEECCCCc-hhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcC--C-CCceE
Confidence 9999999862 11123444455667889999999 999998764111 1125666653 2 33467
Q ss_pred EEEeecCcEEEEeecccch
Q 000080 2361 SITCHEGLYDLFLPLKLLN 2379 (2389)
Q Consensus 2361 sL~GH~~~V~svA~~~~~~ 2379 (2389)
.|..|...+..... ++|+
T Consensus 266 ~l~~~~~~~~~~~~-~~g~ 283 (695)
T 2bkl_A 266 LLVKGVGAKYEVHA-WKDR 283 (695)
T ss_dssp EEEECSSCCEEEEE-ETTE
T ss_pred EeecCCCceEEEEe-cCCc
Confidence 77777776666554 4554
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.72 E-value=2.4e-08 Score=124.83 Aligned_cols=152 Identities=6% Similarity=-0.063 Sum_probs=99.6
Q ss_pred EEEc--CCCCe-EEEEeC-CCcEEEeecC-CC-ceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC------
Q 000080 2225 FSSH--PLRPF-FLVGSS-NTHIYLWEFG-KD-KATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD------ 2292 (2389)
Q Consensus 2225 VAFs--PdG~~-LASGS~-DgTIRLWDl~-tG-k~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D------ 2292 (2389)
.+|+ |||+. ||.++. +..|++||.. +| .....+. .. +...|...+.+++|||||++||+++.|
T Consensus 82 ~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~---~~--~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~ 156 (662)
T 3azo_A 82 WAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLT---PV--SAVGGGLRWADPVLLPERGEVWCMAEEFTGEGP 156 (662)
T ss_dssp EEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECS---CC--CCSTTCEEEEEEEEETTTTEEEEEEEEECSSST
T ss_pred ceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEecc---CC--ccCCCCccccCcEECCCCCEEEEEEecccCCCC
Confidence 3454 99998 776654 5667777764 02 3334442 11 001145679999999999999999988
Q ss_pred ----CcEEEeeCCCCCccCcccceeee-ecCCCeeEEEEecCCCCEEEEeecCC-----CCCeEEEeeCCCCCC---Cce
Q 000080 2293 ----GTVCTWQLEVGGRSNVRPMESCL-CFSSHAMDVSYITSSGSVIAAAGHSS-----NGINVVVWDTLAPPT---SSR 2359 (2389)
Q Consensus 2293 ----gTVkLWDl~tggrs~~k~l~tl~-gHs~~V~sVAFSP~DGslLASAG~sS-----~D~TVrLWD~l~~tg---~~v 2359 (2389)
.+|++||+.++..........+. .+...+.+++||| ||+.||.++... ...+|++||+. .++ +..
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~-~~g~~~~~~ 234 (662)
T 3azo_A 157 SDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVT-EDGRFADTR 234 (662)
T ss_dssp TCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEEC-TTSCEEEEE
T ss_pred CCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEEC-CCCcccccE
Confidence 68999999872000000123444 5567788899999 999999764211 11479999972 134 233
Q ss_pred EEEEeecCcEEEEeecccchhhhc
Q 000080 2360 ASITCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2360 ~sL~GH~~~V~svA~~~~~~~~~s 2383 (2389)
+...+|...+..++++|+|+.+.+
T Consensus 235 ~l~~~~~~~~~~~~~spdg~l~~~ 258 (662)
T 3azo_A 235 TLLGGPEEAIAQAEWAPDGSLIVA 258 (662)
T ss_dssp EEEEETTBCEEEEEECTTSCEEEE
T ss_pred EeCCCCCceEcceEECCCCeEEEE
Confidence 344556789999999999986554
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.69 E-value=1.2e-07 Score=108.08 Aligned_cols=134 Identities=8% Similarity=-0.013 Sum_probs=93.0
Q ss_pred EEEEEEcCCCCeEEEEeCCC-----cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC----
Q 000080 2222 TRAFSSHPLRPFFLVGSSNT-----HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD---- 2292 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~Dg-----TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D---- 2292 (2389)
+..++|+|||++||.++.++ .|.+||+.+|+..+... +.. |..++|||||+.||.++.+
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-----------~~~-~~~~~wspdg~~l~~~~~~~~~~ 128 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE-----------AKN-IRSLEWNEDSRKLLIVGFKRRED 128 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE-----------ESE-EEEEEECTTSSEEEEEEECCCC-
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc-----------CCC-ccceeECCCCCEEEEEEccCCCc
Confidence 47789999999999887653 48888988887655432 113 9999999999999998743
Q ss_pred -----------------------CcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCC-C--C-e
Q 000080 2293 -----------------------GTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSN-G--I-N 2345 (2389)
Q Consensus 2293 -----------------------gTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~-D--~-T 2345 (2389)
..|.+||++++. ....+.. . .+.+++|+| || +++++..... . . .
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~-----~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~ 199 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE-----VIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKF 199 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTE-----EEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCC
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCe-----EEeeecC-C-CcccccCCC-Ce-EEEEEeccccccccccc
Confidence 579999998762 2233444 3 788999999 88 7776532111 0 2 5
Q ss_pred EEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhh
Q 000080 2346 VVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2346 VrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~ 2382 (2389)
.+||.+. + ..+..+..| ..+..+ +|+|++++
T Consensus 200 ~~l~~~d--~-~~~~~l~~~-~~~~~~--spdg~~l~ 230 (347)
T 2gop_A 200 WDIYIWE--D-GKEEKMFEK-VSFYAV--DSDGERIL 230 (347)
T ss_dssp EEEEEEE--T-TEEEEEEEE-ESEEEE--EECSSCEE
T ss_pred ccEEEeC--C-CceEEeccC-cceeeE--CCCCCEEE
Confidence 6677653 2 335666666 556554 89998765
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.66 E-value=1.3e-07 Score=109.37 Aligned_cols=140 Identities=7% Similarity=-0.044 Sum_probs=101.6
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEE--EECCCCCEEEEE------------
Q 000080 2224 AFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISAL--QFDHYGHRFASA------------ 2289 (2389)
Q Consensus 2224 sVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sV--aFSPDG~~LASg------------ 2289 (2389)
.++|+|||+.|+.++.|++|++||+.+|+....+.. +...+... .++|||+.++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~----------~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~ 154 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV----------PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTD 154 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC----------CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec----------hhhcccccceeECCCCCeeccccccCcccccccc
Confidence 348999999999999999999999999987665531 22445443 459999999853
Q ss_pred ----------eCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCC---CCeEEEeeCCCCCC
Q 000080 2290 ----------ALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSN---GINVVVWDTLAPPT 2356 (2389)
Q Consensus 2290 ----------S~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~---D~TVrLWD~l~~tg 2356 (2389)
+.++.|.+||+.++. ...+..+...+..++|+|.||+.||.+..+.. +..|.+||+ .+
T Consensus 155 ~~~~~~~~~~~~~~~l~~~d~~~g~------~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~---~~ 225 (388)
T 3pe7_A 155 WKKFHEFYFTKPCCRLMRVDLKTGE------STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINE---DG 225 (388)
T ss_dssp HHHHHHHGGGCCCEEEEEEETTTCC------EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEET---TS
T ss_pred cchhhhhhccCCcceEEEEECCCCc------eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeC---CC
Confidence 345789999999862 34455677789999999866788887642111 336777775 34
Q ss_pred CceEEEEeecC--cEEEEeecccchhhh
Q 000080 2357 SSRASITCHEG--LYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2357 ~~v~sL~GH~~--~V~svA~~~~~~~~~ 2382 (2389)
..++.+..+.. .+..++++|+|++++
T Consensus 226 ~~~~~l~~~~~~~~~~~~~~spdg~~l~ 253 (388)
T 3pe7_A 226 TNMRKVKTHAEGESCTHEFWVPDGSALV 253 (388)
T ss_dssp CCCEESCCCCTTEEEEEEEECTTSSCEE
T ss_pred CceEEeeeCCCCcccccceECCCCCEEE
Confidence 45666665653 577899999999764
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.66 E-value=3.8e-07 Score=105.69 Aligned_cols=152 Identities=13% Similarity=0.179 Sum_probs=113.5
Q ss_pred EEEEEEcC-CCCeEEEEe-CCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCC-CCEEEEEeCCCcEEEe
Q 000080 2222 TRAFSSHP-LRPFFLVGS-SNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHY-GHRFASAALDGTVCTW 2298 (2389)
Q Consensus 2222 VrsVAFsP-dG~~LASGS-~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD-G~~LASgS~DgTVkLW 2298 (2389)
.+.|+|+| +|.++++.+ .++.|++|| .+|+.+.++........+.+++....+.|+|+|+ |+.+++...+++|++|
T Consensus 145 P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~ 223 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCF 223 (329)
T ss_dssp EEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEE
Confidence 37889999 899999997 799999999 5788877764210000112345567899999999 8899999999999999
Q ss_pred eCCCCCccCcccceee--eecCCCeeEEEEecCCCCEEEEeec----CCCCCeEEEeeCCCCCCCceEEE---EeecCcE
Q 000080 2299 QLEVGGRSNVRPMESC--LCFSSHAMDVSYITSSGSVIAAAGH----SSNGINVVVWDTLAPPTSSRASI---TCHEGLY 2369 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl--~gHs~~V~sVAFSP~DGslLASAG~----sS~D~TVrLWD~l~~tg~~v~sL---~GH~~~V 2369 (2389)
|.++|. .+.++ .++...+++++|+| |..+++.|. ++.+.+|++||+ .+++.+..+ .+|-...
T Consensus 224 ~~~~G~-----~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~--~~g~~~~~~~~~~~~~~~p 294 (329)
T 3fvz_A 224 KTDTKE-----FVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNF--SSGEIIDVFKPVRKHFDMP 294 (329)
T ss_dssp ETTTCC-----EEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEET--TTCCEEEEECCSSSCCSSE
T ss_pred ECCCCc-----EEEEEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEc--CCCeEEEEEcCCCCccCCe
Confidence 998762 33343 35667889999998 555555431 134568999997 567778887 4788889
Q ss_pred EEEeecccchhhhc
Q 000080 2370 DLFLPLKLLNFALS 2383 (2389)
Q Consensus 2370 ~svA~~~~~~~~~s 2383 (2389)
..|+++++|+..++
T Consensus 295 ~~ia~~~dG~lyva 308 (329)
T 3fvz_A 295 HDIVASEDGTVYIG 308 (329)
T ss_dssp EEEEECTTSEEEEE
T ss_pred eEEEECCCCCEEEE
Confidence 99999999965554
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.63 E-value=2.8e-07 Score=109.19 Aligned_cols=90 Identities=8% Similarity=-0.036 Sum_probs=73.5
Q ss_pred EEECCCCCEEEEEeC-----------CCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCe
Q 000080 2277 LQFDHYGHRFASAAL-----------DGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGIN 2345 (2389)
Q Consensus 2277 VaFSPDG~~LASgS~-----------DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~T 2345 (2389)
++|+|||+++..+.. +++|.+||++++ +.+.++..+. +++++|+| ||++|++++ . ++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-----~~v~~i~~~~--p~~ia~sp-dg~~l~v~n---~-~~ 326 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-----QRVARIPGRD--ALSMTIDQ-QRNLMLTLD---G-GN 326 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-----EEEEEEECTT--CCEEEEET-TTTEEEEEC---S-SC
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC-----cEEEEEecCC--eeEEEECC-CCCEEEEeC---C-Ce
Confidence 689999887766543 358999999986 4677777776 89999999 999999863 4 89
Q ss_pred EEEeeCCCCCC--CceEEEEeecCcEEEEeecccchh
Q 000080 2346 VVVWDTLAPPT--SSRASITCHEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2346 VrLWD~l~~tg--~~v~sL~GH~~~V~svA~~~~~~~ 2380 (2389)
|.+||+ .++ +.++++..+-..-+.++++|+|++
T Consensus 327 v~v~D~--~t~~l~~~~~i~~~G~~P~~~~~~p~G~~ 361 (361)
T 2oiz_A 327 VNVYDI--SQPEPKLLRTIEGAAEASLQVQFHPVGGT 361 (361)
T ss_dssp EEEEEC--SSSSCEEEEEETTSCSSEEEEEECCCSCC
T ss_pred EEEEEC--CCCcceeeEEeccCCCCcEEEEecCCCCC
Confidence 999997 577 778888777778889999999974
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.60 E-value=6e-07 Score=100.29 Aligned_cols=140 Identities=9% Similarity=0.012 Sum_probs=107.4
Q ss_pred EEEEEE-cCCCCeEEEEeC-CCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2222 TRAFSS-HPLRPFFLVGSS-NTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2222 VrsVAF-sPdG~~LASGS~-DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
+..+++ .++|.+++++.. ++.|++|| .+|+.+.++.. ++...++.|+|+|+|+.+++.+.++.|++||
T Consensus 79 p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~---------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 148 (286)
T 1q7f_A 79 PNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGA---------TILQHPRGVTVDNKGRIIVVECKVMRVIIFD 148 (286)
T ss_dssp EEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECT---------TTCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecC---------ccCCCceEEEEeCCCCEEEEECCCCEEEEEc
Confidence 377899 588888888754 89999999 57888777631 2346789999999999999999999999999
Q ss_pred CCCCCccCcccceeee--ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEee--cCcEEEEeec
Q 000080 2300 LEVGGRSNVRPMESCL--CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCH--EGLYDLFLPL 2375 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~--gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH--~~~V~svA~~ 2375 (2389)
.. + +.+..+. ++...+++++++| +|+++++. +.++.|++||. .++.+..+..+ ......++++
T Consensus 149 ~~-g-----~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~---~~~~~i~~~~~---~g~~~~~~~~~g~~~~p~~i~~d 215 (286)
T 1q7f_A 149 QN-G-----NVLHKFGCSKHLEFPNGVVVND-KQEIFISD---NRAHCVKVFNY---EGQYLRQIGGEGITNYPIGVGIN 215 (286)
T ss_dssp TT-S-----CEEEEEECTTTCSSEEEEEECS-SSEEEEEE---GGGTEEEEEET---TCCEEEEESCTTTSCSEEEEEEC
T ss_pred CC-C-----CEEEEeCCCCccCCcEEEEECC-CCCEEEEE---CCCCEEEEEcC---CCCEEEEEccCCccCCCcEEEEC
Confidence 65 2 1233332 4556789999999 89988874 46889999995 46667777543 4678899999
Q ss_pred ccchhhhcc
Q 000080 2376 KLLNFALSK 2384 (2389)
Q Consensus 2376 ~~~~~~~s~ 2384 (2389)
++|+..++-
T Consensus 216 ~~G~l~v~~ 224 (286)
T 1q7f_A 216 SNGEILIAD 224 (286)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEEEEe
Confidence 999876654
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.60 E-value=1.2e-06 Score=99.80 Aligned_cols=145 Identities=11% Similarity=0.031 Sum_probs=101.8
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC----CcEEE
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD----GTVCT 2297 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D----gTVkL 2297 (2389)
+.+++|+|+|+++++++.++.|++||..+++...... .+...|.+++|+|||+.++++..+ +.|.+
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~----------~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV----------SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE----------CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee----------CCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 3778999999999999999999999998887654331 123669999999999999988887 79999
Q ss_pred eeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecC-CCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecc
Q 000080 2298 WQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHS-SNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLK 2376 (2389)
Q Consensus 2298 WDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~s-S~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~ 2376 (2389)
||.+++. ...+..-..+...+++++++| +|+++++...+ ..+.+.+||.+. +.+..+..+..+...+..+++++
T Consensus 117 ~d~~~~~---~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~i~~~~ 191 (333)
T 2dg1_A 117 ATENGDN---LQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVS-PDFRTVTPIIQNISVANGIALST 191 (333)
T ss_dssp ECTTSCS---CEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEEC-TTSCCEEEEEEEESSEEEEEECT
T ss_pred EeCCCCE---EEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEe-CCCCEEEEeecCCCcccceEECC
Confidence 9998752 111111113456789999999 89988874200 012244555542 22334555555666788999999
Q ss_pred cchhh
Q 000080 2377 LLNFA 2381 (2389)
Q Consensus 2377 ~~~~~ 2381 (2389)
+|+++
T Consensus 192 dg~~l 196 (333)
T 2dg1_A 192 DEKVL 196 (333)
T ss_dssp TSSEE
T ss_pred CCCEE
Confidence 99743
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.53 E-value=5.3e-08 Score=111.93 Aligned_cols=141 Identities=9% Similarity=-0.125 Sum_probs=93.9
Q ss_pred EEEEEcCCCCeEEEEeCC---CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2223 RAFSSHPLRPFFLVGSSN---THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~D---gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
..++|+|||++||.++.+ ..|.+||+.+|+..+.. .+ +......++|||||++||.++.+++|.+||
T Consensus 39 ~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~----~~------~~~~~~~~~~spdg~~l~~~~~~~~l~~~d 108 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT----EG------KGDNTFGGFISTDERAFFYVKNELNLMKVD 108 (396)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC----CS------SCBCTTTCEECTTSSEEEEEETTTEEEEEE
T ss_pred ecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee----cC------CCCccccceECCCCCEEEEEEcCCcEEEEE
Confidence 445899999998877653 47889999888754322 11 112223378999999999999999999999
Q ss_pred CCCCCccCcccceeeeecCCCeeE-------------------EEEecCCCCEEEEee--cCCCCCeEEEeeCCCCCCCc
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMD-------------------VSYITSSGSVIAAAG--HSSNGINVVVWDTLAPPTSS 2358 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~s-------------------VAFSP~DGslLASAG--~sS~D~TVrLWD~l~~tg~~ 2358 (2389)
+.++. .......+.....+ ++++| +|+.++.+. ....+..|.+||+ .+++
T Consensus 109 ~~~~~-----~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~--~~g~- 179 (396)
T 3c5m_A 109 LETLE-----EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDI--ETGE- 179 (396)
T ss_dssp TTTCC-----EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEET--TTCC-
T ss_pred CCCCC-----cEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEEC--CCCc-
Confidence 98762 22222334443333 34566 666665421 0135678999997 3444
Q ss_pred eEEEEeecCcEEEEeecc-cchhhh
Q 000080 2359 RASITCHEGLYDLFLPLK-LLNFAL 2382 (2389)
Q Consensus 2359 v~sL~GH~~~V~svA~~~-~~~~~~ 2382 (2389)
...+..+...+..++++| +|++++
T Consensus 180 ~~~~~~~~~~~~~~~~sp~dg~~l~ 204 (396)
T 3c5m_A 180 LEVIHQDTAWLGHPIYRPFDDSTVG 204 (396)
T ss_dssp EEEEEEESSCEEEEEEETTEEEEEE
T ss_pred EEeeccCCcccccceECCCCCCEEE
Confidence 455557888999999999 787543
No 179
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.47 E-value=7.8e-07 Score=114.53 Aligned_cols=145 Identities=10% Similarity=-0.010 Sum_probs=100.7
Q ss_pred eEEEEEEcCCCCeEEEEeCC-----CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCc-
Q 000080 2221 STRAFSSHPLRPFFLVGSSN-----THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGT- 2294 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~D-----gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgT- 2294 (2389)
.+.+++|||||++||.++++ .+|++||+.+|+.+.... +...+..++|||| +.|+.++.|++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-----------~~~~~~~~~wspD-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-----------KWVKFSGLAWLGN-DALLYSRFAEPK 231 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-----------EEEESCCCEESTT-SEEEEEECCCC-
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-----------CCceeccEEEECC-CEEEEEEecCcc
Confidence 45788999999999988765 579999999998754311 0112357899999 99999998876
Q ss_pred -------------EEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCC--CCCeEEEeeCCCCCC--C
Q 000080 2295 -------------VCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSS--NGINVVVWDTLAPPT--S 2357 (2389)
Q Consensus 2295 -------------VkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS--~D~TVrLWD~l~~tg--~ 2357 (2389)
|++|++.++. +....+.....|...+.+++||| ||++|+.++... .+..|.+||+. ++ +
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~-~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~--~~~~~ 307 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQ-SADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVT--NGKIG 307 (741)
T ss_dssp -------CCCCCEEEEEETTSCG-GGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEE--TTEEC
T ss_pred cccccccCCCCCEEEEEECCCCc-hhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECC--CCCCc
Confidence 8999998762 11122333333444688999999 999988764222 24589999973 33 3
Q ss_pred ceEEEEeecCcEEEEeecccchhhh
Q 000080 2358 SRASITCHEGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2358 ~v~sL~GH~~~V~svA~~~~~~~~~ 2382 (2389)
+...|..+...+.... +++|++++
T Consensus 308 ~~~~l~~~~~~~~~~~-~~dg~~l~ 331 (741)
T 1yr2_A 308 PVTALIPDLKAQWDFV-DGVGDQLW 331 (741)
T ss_dssp CCEEEECSSSSCEEEE-EEETTEEE
T ss_pred ccEEecCCCCceEEEE-eccCCEEE
Confidence 2677777776666553 47777654
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.45 E-value=1e-06 Score=100.55 Aligned_cols=133 Identities=7% Similarity=0.008 Sum_probs=93.9
Q ss_pred EEEEEEcCCCCeEEEEe---------CCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC
Q 000080 2222 TRAFSSHPLRPFFLVGS---------SNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD 2292 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS---------~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D 2292 (2389)
+..+++ ||+.+|... .+++|++||+.+|+... + ..+..++|||||++||.++.+
T Consensus 17 ~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l--------------~~~~~~~~SpDg~~la~~~~~ 79 (347)
T 2gop_A 17 LSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I--------------ENATMPRISPDGKKIAFMRAN 79 (347)
T ss_dssp EEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E--------------ESCEEEEECTTSSEEEEEEEE
T ss_pred cccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c--------------ccCCCeEECCCCCEEEEEEec
Confidence 366677 999887642 37889999998876432 2 237899999999999998865
Q ss_pred ---Cc--EEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecC------------------------CCC
Q 000080 2293 ---GT--VCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHS------------------------SNG 2343 (2389)
Q Consensus 2293 ---gT--VkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~s------------------------S~D 2343 (2389)
+. |.+||+.++. . ..+..+.. +.+++|+| ||+.||.++.. ..+
T Consensus 80 ~~~~~~~l~~~~~~~g~-----~-~~l~~~~~-~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 151 (347)
T 2gop_A 80 EEKKVSEIWVADLETLS-----S-KKILEAKN-IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEK 151 (347)
T ss_dssp TTTTEEEEEEEETTTTE-----E-EEEEEESE-EEEEEECT-TSSEEEEEEECCCC---------CCCC---------CE
T ss_pred cCCCcceEEEEECCCCc-----e-EEEEcCCC-ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCcc
Confidence 33 7777887652 2 22233334 89999999 99999986411 013
Q ss_pred CeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhhcc
Q 000080 2344 INVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2344 ~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
..|.+||+ .+++.++.+.. . .+..++.+|+| .+++.
T Consensus 152 ~~l~~~d~--~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 152 TTFWIFDT--ESEEVIEEFEK-P-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp EEEEEEET--TTTEEEEEEEE-E-TTCEEEEETTE-EEEEE
T ss_pred ceEEEEEC--CCCeEEeeecC-C-CcccccCCCCe-EEEEE
Confidence 57999997 34444466766 4 88899999999 66653
No 181
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.45 E-value=7.5e-07 Score=105.56 Aligned_cols=76 Identities=8% Similarity=0.021 Sum_probs=58.6
Q ss_pred EEEEcCCCCeEEEEe----------CCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC--
Q 000080 2224 AFSSHPLRPFFLVGS----------SNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL-- 2291 (2389)
Q Consensus 2224 sVAFsPdG~~LASGS----------~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~-- 2291 (2389)
.++|||||+++.+++ .|++|.+||..+++.+.++...+.+ ..+......++|||||++|.++..
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~----~~~g~~p~~i~~spdg~~l~v~n~~~ 129 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR----VQGLNYDGLFRQTTDGKFIVLQNASP 129 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB----CCBCCCGGGEEECTTSSEEEEEEESS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc----cccCCCcceEEECCCCCEEEEECCCC
Confidence 789999999988876 3778999999999988877421111 011245678999999999988863
Q ss_pred CCcEEEeeCCCC
Q 000080 2292 DGTVCTWQLEVG 2303 (2389)
Q Consensus 2292 DgTVkLWDl~tg 2303 (2389)
+++|.+||++++
T Consensus 130 ~~~v~v~d~~~~ 141 (361)
T 2oiz_A 130 ATSIGIVDVAKG 141 (361)
T ss_dssp SEEEEEEETTTT
T ss_pred CCeEEEEECCCC
Confidence 689999998764
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.44 E-value=9.3e-07 Score=99.72 Aligned_cols=146 Identities=9% Similarity=-0.002 Sum_probs=100.1
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCC--------
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDG-------- 2293 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~Dg-------- 2293 (2389)
+.+++++|+|+++++.+.++.|.+||..+|+.........+ .....++.++|+|||+.+++.+.+|
T Consensus 71 ~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~ 144 (296)
T 3e5z_A 71 QNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEG------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGY 144 (296)
T ss_dssp EEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETT------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSS
T ss_pred cceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCC------CCCCCCCCEEECCCCCEEEECCccccccccccc
Confidence 47899999999999888889999999988876443321111 1124578899999999999843221
Q ss_pred -------cEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc---eEEEE
Q 000080 2294 -------TVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS---RASIT 2363 (2389)
Q Consensus 2294 -------TVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~---v~sL~ 2363 (2389)
.-+||.+...+ .+..+..+....+.++|+| ||++|++. +.++.|++||+. ++++. ...+.
T Consensus 145 ~~~~~~~~~~l~~~~~~g-----~~~~~~~~~~~~~gi~~s~-dg~~lv~~---~~~~~i~~~~~~-~~g~~~~~~~~~~ 214 (296)
T 3e5z_A 145 GGEMELPGRWVFRLAPDG-----TLSAPIRDRVKPNGLAFLP-SGNLLVSD---TGDNATHRYCLN-ARGETEYQGVHFT 214 (296)
T ss_dssp CCCCCSSSCEEEEECTTS-----CEEEEECCCSSEEEEEECT-TSCEEEEE---TTTTEEEEEEEC-SSSCEEEEEEEEC
T ss_pred cccccCCCcEEEEECCCC-----CEEEeecCCCCCccEEECC-CCCEEEEe---CCCCeEEEEEEC-CCCcCcCCCeEee
Confidence 22555554422 2344456677789999999 99988553 578899999984 23433 23344
Q ss_pred eecCcEEEEeecccchhhhc
Q 000080 2364 CHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2364 GH~~~V~svA~~~~~~~~~s 2383 (2389)
.+.+.+..++.+++|+..++
T Consensus 215 ~~~~~p~~i~~d~~G~l~v~ 234 (296)
T 3e5z_A 215 VEPGKTDGLRVDAGGLIWAS 234 (296)
T ss_dssp CSSSCCCSEEEBTTSCEEEE
T ss_pred CCCCCCCeEEECCCCCEEEE
Confidence 45566678889999875443
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.43 E-value=1.6e-06 Score=97.73 Aligned_cols=142 Identities=11% Similarity=-0.005 Sum_probs=100.8
Q ss_pred EEEEEcCCCC-eEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2223 RAFSSHPLRP-FFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2223 rsVAFsPdG~-~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
.+++|+|+|+ +++++..++.|+.||..++ ...+.. +...+.+++|+|||+.+++...++.|.+||.+
T Consensus 31 eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~----------~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH----------PSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES----------SCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred cCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC----------CCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 6779999999 8889999999999999776 555531 23568999999999999998889999999998
Q ss_pred CCCccCccccee-eee-cCCCeeEEEEecCCCCEEEEeec-CC-----------CCCeEEEeeCCCCCCCceEEEEeecC
Q 000080 2302 VGGRSNVRPMES-CLC-FSSHAMDVSYITSSGSVIAAAGH-SS-----------NGINVVVWDTLAPPTSSRASITCHEG 2367 (2389)
Q Consensus 2302 tggrs~~k~l~t-l~g-Hs~~V~sVAFSP~DGslLASAG~-sS-----------~D~TVrLWD~l~~tg~~v~sL~GH~~ 2367 (2389)
++.. ..+.. ..+ ....+++++++| +|++++|... ++ +.+.-+||.+. +. ..+..+..+..
T Consensus 99 ~g~~---~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~-~~-g~~~~~~~~~~ 172 (296)
T 3e5z_A 99 GGEW---ESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA-PD-GTLSAPIRDRV 172 (296)
T ss_dssp TCCE---EEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC-TT-SCEEEEECCCS
T ss_pred CCcE---EEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEEC-CC-CCEEEeecCCC
Confidence 7631 11111 111 123567899999 9999997310 01 00122455542 22 44666777888
Q ss_pred cEEEEeecccchhhh
Q 000080 2368 LYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2368 ~V~svA~~~~~~~~~ 2382 (2389)
....++++|+|+..+
T Consensus 173 ~~~gi~~s~dg~~lv 187 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLV 187 (296)
T ss_dssp SEEEEEECTTSCEEE
T ss_pred CCccEEECCCCCEEE
Confidence 889999999998654
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.40 E-value=5.5e-07 Score=102.58 Aligned_cols=139 Identities=9% Similarity=0.019 Sum_probs=103.0
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
|.+++|+|++..+++.+.|++++.| .++...++. + +...+.+++|+|||+.++++..++.|.+||.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~-------~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~ 74 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTI---TAEPWLEIS---K-------KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPE 74 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEE---S-------SCCCEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred cceeeecCCccceeEEeecccCccc---ccceeEEEe---c-------cCccccCcEECCCCCEEEEECCCCEEEEEeCC
Confidence 3667899999988888999999999 345555552 2 33668999999999988899999999999998
Q ss_pred CCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCC----CeEEEeeCCCCCCCceEEEE--eecCcEEEEeec
Q 000080 2302 VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNG----INVVVWDTLAPPTSSRASIT--CHEGLYDLFLPL 2375 (2389)
Q Consensus 2302 tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D----~TVrLWD~l~~tg~~v~sL~--GH~~~V~svA~~ 2375 (2389)
++. .......+...+.+++++| +|++++++ ..+ +.|.+||. .++.....+. .+...+..++.+
T Consensus 75 ~~~-----~~~~~~~~~~~~~~i~~~~-dg~l~v~~---~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~~~~~i~~d 143 (333)
T 2dg1_A 75 TKE-----IKRPFVSHKANPAAIKIHK-DGRLFVCY---LGDFKSTGGIFAATE--NGDNLQDIIEDLSTAYCIDDMVFD 143 (333)
T ss_dssp TCC-----EEEEEECSSSSEEEEEECT-TSCEEEEE---CTTSSSCCEEEEECT--TSCSCEEEECSSSSCCCEEEEEEC
T ss_pred CCc-----EEEEeeCCCCCcceEEECC-CCcEEEEe---CCCCCCCceEEEEeC--CCCEEEEEEccCccCCcccceEEC
Confidence 762 1111224667899999999 89988874 244 68999996 2333322332 245678999999
Q ss_pred ccchhhhcc
Q 000080 2376 KLLNFALSK 2384 (2389)
Q Consensus 2376 ~~~~~~~s~ 2384 (2389)
++|+..++-
T Consensus 144 ~~g~l~v~~ 152 (333)
T 2dg1_A 144 SKGGFYFTD 152 (333)
T ss_dssp TTSCEEEEE
T ss_pred CCCCEEEEe
Confidence 999876653
No 185
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.37 E-value=1.8e-06 Score=110.86 Aligned_cols=142 Identities=11% Similarity=0.030 Sum_probs=99.8
Q ss_pred eEEEEEEcCCCCeEE-----EEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCE--EEEEECCCCCEEEEEeCCC
Q 000080 2221 STRAFSSHPLRPFFL-----VGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASI--SALQFDHYGHRFASAALDG 2293 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LA-----SGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V--~sVaFSPDG~~LASgS~Dg 2293 (2389)
.+.+++|||||++|| +|+++.+|++||+.+|+.+..-. ..+ .+++|+ ||+.|+.++.|.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-------------~~~k~~~~~Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-------------KDVKFSGISWL-GNEGFFYSSYDK 195 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-------------EEEESCCCEEE-TTTEEEEEESSC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-------------CCceeccEEEe-CCCEEEEEEecC
Confidence 457889999999998 56667899999999998654311 123 578999 999999999986
Q ss_pred c-------------EEEeeCCCCCccCcccceeeee-cCCCeeEEEEecCCCCEEEEee-cCCCCCeEEEeeCCCCCCCc
Q 000080 2294 T-------------VCTWQLEVGGRSNVRPMESCLC-FSSHAMDVSYITSSGSVIAAAG-HSSNGINVVVWDTLAPPTSS 2358 (2389)
Q Consensus 2294 T-------------VkLWDl~tggrs~~k~l~tl~g-Hs~~V~sVAFSP~DGslLASAG-~sS~D~TVrLWD~l~~tg~~ 2358 (2389)
+ |++|++.++. .....+..... |.....+++|+| ||++|+... .+..++.|.+||+.. ....
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~-~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~-~~~~ 272 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQ-EDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQ-ENAP 272 (693)
T ss_dssp CC-------CCCCEEEEEETTSCG-GGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTS-TTCC
T ss_pred cccccccccCCCcEEEEEECCCCc-ccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCC-CCCc
Confidence 5 9999998863 11123444444 566678899999 999875432 222446899999732 1224
Q ss_pred eEEEEeecCcEEEEeecccchh
Q 000080 2359 RASITCHEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2359 v~sL~GH~~~V~svA~~~~~~~ 2380 (2389)
...|..+.+..... .+++|++
T Consensus 273 ~~~l~~~~~~~~~~-~~~~g~~ 293 (693)
T 3iuj_A 273 LLTVQGDLDADVSL-VDNKGST 293 (693)
T ss_dssp CEEEECSSSSCEEE-EEEETTE
T ss_pred eEEEeCCCCceEEE-EeccCCE
Confidence 67788887776654 3445543
No 186
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.35 E-value=1.6e-06 Score=105.86 Aligned_cols=131 Identities=8% Similarity=-0.029 Sum_probs=99.7
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
|+.|+| |+.+|+.+ .|+.|++||+.+-....+.. . |...|.++.+.+. .+|+++.||+|.+||+.
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~---~-------~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVT---S-------FEKPVFQLKNVNN--TLVILNSVNDLSALDLR 154 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEE---E-------CSSCEEEEEECSS--EEEEEETTSEEEEEETT
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccc---e-------eecceeeEEecCC--CEEEEECCCCEEEEEcc
Confidence 589999 99999998 88999999997665444432 2 3456888888765 39999999999999999
Q ss_pred CCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc--eEEE------E---eecCcEE
Q 000080 2302 VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS--RASI------T---CHEGLYD 2370 (2389)
Q Consensus 2302 tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~--v~sL------~---GH~~~V~ 2370 (2389)
.+. . .. +...|.+++||| +| ++.| ..|++|++|+. ..+.+ .+.+ . +|...|.
T Consensus 155 ~~~-----~-~~---~~~~Vs~v~WSp-kG--~~vg---~~dg~i~~~~~--~~~~~~~k~~I~~Pp~~~~~~~~~~~V~ 217 (388)
T 1xip_A 155 TKS-----T-KQ---LAQNVTSFDVTN-SQ--LAVL---LKDRSFQSFAW--RNGEMEKQFEFSLPSELEELPVEEYSPL 217 (388)
T ss_dssp TCC-----E-EE---EEESEEEEEECS-SE--EEEE---ETTSCEEEEEE--ETTEEEEEEEECCCHHHHTSCTTTSEEE
T ss_pred CCc-----c-cc---ccCCceEEEEcC-Cc--eEEE---EcCCcEEEEcC--CCccccccceecCCcccccccCCCeeEE
Confidence 752 1 11 446899999999 88 4443 37899999986 22232 4456 2 4788899
Q ss_pred EEeecccchhhhcc
Q 000080 2371 LFLPLKLLNFALSK 2384 (2389)
Q Consensus 2371 svA~~~~~~~~~s~ 2384 (2389)
+|...+.+.|.++-
T Consensus 218 sI~wl~~~~flv~y 231 (388)
T 1xip_A 218 SVTILSPQDFLAVF 231 (388)
T ss_dssp EEEESSSSEEEEEE
T ss_pred EEEEecCCeEEEEE
Confidence 99999999998863
No 187
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.34 E-value=2.5e-06 Score=98.12 Aligned_cols=110 Identities=10% Similarity=-0.075 Sum_probs=80.0
Q ss_pred eEEEEEEcCCCCeEEEEeCC-----CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECC-CCCEEEEEe----
Q 000080 2221 STRAFSSHPLRPFFLVGSSN-----THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDH-YGHRFASAA---- 2290 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~D-----gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSP-DG~~LASgS---- 2290 (2389)
.+..++|+|||++|+.++.+ ++|++||+.+|+...... . ++ .. ++|+| ||+.+++++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~-------~~----~~-~~~s~~dg~~l~~~~~~~p 305 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-M-------PP----CS-HLMSNFDGSLMVGDGCDAP 305 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-C-------CS----EE-EEEECSSSSEEEEEECCC-
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-C-------CC----CC-CCccCCCCceEEEecCCcc
Confidence 46889999999988887765 559999998887544321 1 11 23 89999 999999865
Q ss_pred ------------CCCcEEEeeCCCCCccCcccceeeeecCC-----------CeeEEEEecCCCCEEEEeecCCCCCeEE
Q 000080 2291 ------------LDGTVCTWQLEVGGRSNVRPMESCLCFSS-----------HAMDVSYITSSGSVIAAAGHSSNGINVV 2347 (2389)
Q Consensus 2291 ------------~DgTVkLWDl~tggrs~~k~l~tl~gHs~-----------~V~sVAFSP~DGslLASAG~sS~D~TVr 2347 (2389)
.++.|.+||++++. ...+..|.. .+.+++|+| ||+.|+.++ ..++...
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~s--~~~~~~~ 376 (396)
T 3c5m_A 306 VDVADADSYNIENDPFLYVLNTKAKS------AQKLCKHSTSWDVLDGDRQITHPHPSFTP-NDDGVLFTS--DFEGVPA 376 (396)
T ss_dssp ---------CCCCCCEEEEEETTTTB------CCEEEECCCCCCCBTTBSSTTCCCCEECT-TSSEEEEEE--CTTSSCE
T ss_pred eeeccccccccCCCCcEEEEecccCc------eEEccCCCCccccccccccCCCCCceEcc-CCCeEEEEe--cCCCCce
Confidence 35789999998752 234455554 256789999 999998864 4566777
Q ss_pred EeeCC
Q 000080 2348 VWDTL 2352 (2389)
Q Consensus 2348 LWD~l 2352 (2389)
||.+.
T Consensus 377 l~~~~ 381 (396)
T 3c5m_A 377 IYIAD 381 (396)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87764
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.30 E-value=6.4e-06 Score=105.32 Aligned_cols=146 Identities=9% Similarity=0.022 Sum_probs=103.2
Q ss_pred EEEEEEcCCCCeEEEEeCCCc----------------EEEeecCCCce--eeEecccCCCCCCCCCCCCCEEEEEECCCC
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTH----------------IYLWEFGKDKA--TATYGVLPAANVPPPYALASISALQFDHYG 2283 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgT----------------IRLWDl~tGk~--l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG 2283 (2389)
+.+++|+|||+.|+.++.|+. |++|++++++. +..+. . +.|...+..++|||||
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~---~-----~~~~~~~~~~~~SpDg 244 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAE---F-----PDEPKWMGGAELSDDG 244 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEEC---C-----TTCTTCEEEEEECTTS
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEec---c-----CCCCeEEEEEEEcCCC
Confidence 356799999999999998877 99999998873 23332 1 1244678999999999
Q ss_pred CEEEEEeC-----CCcEEEeeCCC------CCccCcccceeeeecCCCeeEEEEecCCCCEEEEeec-CCCCCeEEEeeC
Q 000080 2284 HRFASAAL-----DGTVCTWQLEV------GGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGH-SSNGINVVVWDT 2351 (2389)
Q Consensus 2284 ~~LASgS~-----DgTVkLWDl~t------ggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~-sS~D~TVrLWD~ 2351 (2389)
++|+.++. +..|.+||+.+ +. .....+..|...+.. .|+| +|+.|+..+. +..+..|.+||+
T Consensus 245 ~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~----~~~~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~ 318 (710)
T 2xdw_A 245 RYVLLSIREGCDPVNRLWYCDLQQESNGITGI----LKWVKLIDNFEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDF 318 (710)
T ss_dssp CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS----CCCEEEECSSSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEET
T ss_pred CEEEEEEEccCCCccEEEEEECcccccccCCc----cceEEeeCCCCcEEE-EEec-cCCEEEEEECCCCCCCEEEEEeC
Confidence 99998875 67899999986 41 135666777776665 4888 7887775431 112447999997
Q ss_pred CCCCCC--ceEEEEeecC--cEEEEeecccchhhhc
Q 000080 2352 LAPPTS--SRASITCHEG--LYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2352 l~~tg~--~v~sL~GH~~--~V~svA~~~~~~~~~s 2383 (2389)
. +++ ..+.+..|.. .+..++.++++..+++
T Consensus 319 ~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~ 352 (710)
T 2xdw_A 319 T--DPEESKWKVLVPEHEKDVLEWVACVRSNFLVLC 352 (710)
T ss_dssp T--SCCGGGCEEEECCCSSCEEEEEEEETTTEEEEE
T ss_pred C--CCCcccceeccCCCCCCeEEEEEEEcCCEEEEE
Confidence 3 332 3567777765 5778888866555544
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.30 E-value=6.5e-06 Score=105.16 Aligned_cols=141 Identities=11% Similarity=-0.047 Sum_probs=95.8
Q ss_pred EEEEEcCCCCeEEEEeCCCc-------------EEEeecCCCce--eeEecccCCCCCCCCCCCCCEEEEEECCCCCEEE
Q 000080 2223 RAFSSHPLRPFFLVGSSNTH-------------IYLWEFGKDKA--TATYGVLPAANVPPPYALASISALQFDHYGHRFA 2287 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgT-------------IRLWDl~tGk~--l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LA 2287 (2389)
..++|+|||+.|+.++.|.+ |++|++++++. ...+. . ++|...+.+++|||||++|+
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~---~-----~~~~~~~~~~~~SpDG~~l~ 242 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHE---R-----TGDPTTFLQSDLSRDGKYLF 242 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEEC---C-----CCCTTCEEEEEECTTSCCEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEe---c-----CCCCEEEEEEEECCCCCEEE
Confidence 46799999999999999887 99999998873 23332 1 23446799999999999999
Q ss_pred EEeCCC----cEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc--eEE
Q 000080 2288 SAALDG----TVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS--RAS 2361 (2389)
Q Consensus 2288 SgS~Dg----TVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~--v~s 2361 (2389)
.++.++ .|.+||..++ ....+..+...+....+ | +|++++++..+..+++|.+||+. +++. .+.
T Consensus 243 ~~~~~~~~~~~l~~~~~~~~------~~~~l~~~~~~~~~~~~-~-~g~l~~~s~~~~~~~~l~~~d~~--~~~~~~~~~ 312 (695)
T 2bkl_A 243 VYILRGWSENDVYWKRPGEK------DFRLLVKGVGAKYEVHA-W-KDRFYVLTDEGAPRQRVFEVDPA--KPARASWKE 312 (695)
T ss_dssp EEEEETTTEEEEEEECTTCS------SCEEEEECSSCCEEEEE-E-TTEEEEEECTTCTTCEEEEEBTT--BCSGGGCEE
T ss_pred EEEeCCCCceEEEEEcCCCC------ceEEeecCCCceEEEEe-c-CCcEEEEECCCCCCCEEEEEeCC--CCCccCCeE
Confidence 988776 6666665443 34556667777777777 5 45555554222246899999973 3332 345
Q ss_pred EEee--cCcEEEEeecccchhhh
Q 000080 2362 ITCH--EGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2362 L~GH--~~~V~svA~~~~~~~~~ 2382 (2389)
+..| ...+..++++ ++..++
T Consensus 313 l~~~~~~~~l~~~~~~-~~~lv~ 334 (695)
T 2bkl_A 313 IVPEDSSASLLSVSIV-GGHLSL 334 (695)
T ss_dssp EECCCSSCEEEEEEEE-TTEEEE
T ss_pred EecCCCCCeEEEEEEE-CCEEEE
Confidence 5444 4457777777 444333
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.27 E-value=3.2e-06 Score=97.27 Aligned_cols=131 Identities=8% Similarity=0.017 Sum_probs=97.1
Q ss_pred CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcc
Q 000080 2230 LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVR 2309 (2389)
Q Consensus 2230 dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k 2309 (2389)
.+++|++++.|+.|++||..+|+.+.++.. + ....+++++++|||+.|+ +.++.|+.||. +| +
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~---~------~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G-----~ 66 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL---E------KGWECNSVAATKAGEILF--SYSKGAKMITR-DG-----R 66 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC---C------TTCCCCEEEECTTSCEEE--ECBSEEEEECT-TS-----C
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC---C------ccCCCcCeEECCCCCEEE--eCCCCEEEECC-CC-----C
Confidence 368999999999999999999999988851 1 113578999999999999 46889999999 66 3
Q ss_pred cceeeeec-CCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE------eecCcEEEEeecccchhhh
Q 000080 2310 PMESCLCF-SSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT------CHEGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2310 ~l~tl~gH-s~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~------GH~~~V~svA~~~~~~~~~ 2382 (2389)
.+..+..+ ...+.++++.| ||++|++.+ ..++.|..+| +.++.+..+. ++......+++.++|+..+
T Consensus 67 ~~W~~~~~~~~~~~~~~~~~-dG~~lv~~~--~~~~~v~~vd---~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv 140 (276)
T 3no2_A 67 ELWNIAAPAGCEMQTARILP-DGNALVAWC--GHPSTILEVN---MKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLV 140 (276)
T ss_dssp EEEEEECCTTCEEEEEEECT-TSCEEEEEE--STTEEEEEEC---TTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEE
T ss_pred EEEEEcCCCCccccccEECC-CCCEEEEec--CCCCEEEEEe---CCCCEEEEEeccCCCCcccccccCceECCCCCEEE
Confidence 45555544 35788999999 999998753 1255666666 4677777664 2333455677888888766
Q ss_pred c
Q 000080 2383 S 2383 (2389)
Q Consensus 2383 s 2383 (2389)
+
T Consensus 141 ~ 141 (276)
T 3no2_A 141 P 141 (276)
T ss_dssp E
T ss_pred E
Confidence 4
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.25 E-value=8.4e-06 Score=89.67 Aligned_cols=140 Identities=9% Similarity=0.043 Sum_probs=101.1
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
++.++++|+|+++++.+.++.|..||.++....... ..+...++.|+++|+|+.+++...++.|..||..
T Consensus 110 p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~----------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 110 PEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP----------FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC----------CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred CcceEECCCCCEEEEECCCCEEEEEECCCceeEeec----------cccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 488999999999998888999999987655432211 0122457889999999999998889999999988
Q ss_pred CCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE-EeecCcEEEEeecccchh
Q 000080 2302 VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI-TCHEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2302 tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL-~GH~~~V~svA~~~~~~~ 2380 (2389)
.+. .......+...+.++++.+ +|.++++. ..++.|.+||. .+..+..+ ..+-..+.+++.+++|+.
T Consensus 180 ~~~-----~~~~~~~~~~~p~~i~~d~-~g~l~v~~---~~~~~v~~~~~---~~~~~~~~~~~~~~~p~~i~~~~~g~l 247 (270)
T 1rwi_B 180 SNN-----QVVLPFTDITAPWGIAVDE-AGTVYVTE---HNTNQVVKLLA---GSTTSTVLPFTGLNTPLAVAVDSDRTV 247 (270)
T ss_dssp TCC-----EEECCCSSCCSEEEEEECT-TCCEEEEE---TTTSCEEEECT---TCSCCEECCCCSCSCEEEEEECTTCCE
T ss_pred CCc-----eEeecccCCCCceEEEECC-CCCEEEEE---CCCCcEEEEcC---CCCcceeeccCCCCCceeEEECCCCCE
Confidence 642 1111222336788999999 88888874 46788999996 23333332 234467899999999985
Q ss_pred hhc
Q 000080 2381 ALS 2383 (2389)
Q Consensus 2381 ~~s 2383 (2389)
.++
T Consensus 248 ~v~ 250 (270)
T 1rwi_B 248 YVA 250 (270)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 192
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.23 E-value=5.9e-06 Score=100.98 Aligned_cols=131 Identities=9% Similarity=0.073 Sum_probs=94.5
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCce-e----eEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcE
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKA-T----ATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTV 2295 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~-l----~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTV 2295 (2389)
++..+++++.+.++++|+.| .+++|++...+. . ..++ +....+ +.. |++|+| ||+.|+++ .|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~--~~~~~~---lp~-V~~l~f--d~~~L~v~-~~~~l 108 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLT--FKWEKE---IPD-VIFVCF--HGDQVLVS-TRNAL 108 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCC--CSEEEE---CTT-EEEEEE--ETTEEEEE-ESSEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhcccccccc--ceEEee---CCC-eeEEEE--CCCEEEEE-cCCcE
Confidence 45778999999999999998 477798653330 0 0010 000001 225 999999 99999999 88999
Q ss_pred EEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeec
Q 000080 2296 CTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPL 2375 (2389)
Q Consensus 2296 kLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~ 2375 (2389)
++||+.+.. ...+...|...+.++.+.+++ +|.+ +.||+|.+||+. .+...+ +..+|+|++-|
T Consensus 109 ~v~dv~sl~-----~~~~~~~~~~~v~~i~~~~p~---~av~---~~dG~L~v~dl~--~~~~~~----~~~~Vs~v~WS 171 (388)
T 1xip_A 109 YSLDLEELS-----EFRTVTSFEKPVFQLKNVNNT---LVIL---NSVNDLSALDLR--TKSTKQ----LAQNVTSFDVT 171 (388)
T ss_dssp EEEESSSTT-----CEEEEEECSSCEEEEEECSSE---EEEE---ETTSEEEEEETT--TCCEEE----EEESEEEEEEC
T ss_pred EEEEchhhh-----ccCccceeecceeeEEecCCC---EEEE---ECCCCEEEEEcc--CCcccc----ccCCceEEEEc
Confidence 999998742 234556788889999888733 6665 489999999983 333332 66789999999
Q ss_pred ccc
Q 000080 2376 KLL 2378 (2389)
Q Consensus 2376 ~~~ 2378 (2389)
|+|
T Consensus 172 pkG 174 (388)
T 1xip_A 172 NSQ 174 (388)
T ss_dssp SSE
T ss_pred CCc
Confidence 999
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.21 E-value=1.6e-05 Score=91.53 Aligned_cols=157 Identities=8% Similarity=-0.041 Sum_probs=112.3
Q ss_pred eccccccccccccccCCCCcCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEE
Q 000080 2198 ALGWETQDDFEDYVDPPATVENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISAL 2277 (2389)
Q Consensus 2198 g~~~d~~~~~~~~~d~~atv~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sV 2277 (2389)
.+.-++-+.+|.+..+.. ..++++++.|+|++|+ +.++.|+.||. +|+.+..+.. ++...+.++
T Consensus 19 ~~d~~tG~~~w~~~~~~~----~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~---------~~~~~~~~~ 82 (276)
T 3no2_A 19 IINKDTKEIVWEYPLEKG----WECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA---------PAGCEMQTA 82 (276)
T ss_dssp EEETTTTEEEEEEECCTT----CCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC---------CTTCEEEEE
T ss_pred EEECCCCeEEEEeCCCcc----CCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC---------CCCcccccc
Confidence 445556667777632210 1347789999999999 45888999998 8999988851 122468999
Q ss_pred EECCCCCEEEEEeC-CCcEEEeeCCCCCccCcccceeee------ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEee
Q 000080 2278 QFDHYGHRFASAAL-DGTVCTWQLEVGGRSNVRPMESCL------CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWD 2350 (2389)
Q Consensus 2278 aFSPDG~~LASgS~-DgTVkLWDl~tggrs~~k~l~tl~------gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD 2350 (2389)
++.|||+.+++.+. +++|..+|. +| +.+.++. ++....+.+++.+ +|++|++. +.++.|..||
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~vd~-~G-----k~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~---~~~~~v~~~d 152 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEVNM-KG-----EVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPL---FATSEVREIA 152 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEECT-TS-----CEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEE---TTTTEEEEEC
T ss_pred EECCCCCEEEEecCCCCEEEEEeC-CC-----CEEEEEeccCCCCcccccccCceECC-CCCEEEEe---cCCCEEEEEC
Confidence 99999999999988 777777775 33 1222221 2223455678888 99999985 5889999999
Q ss_pred CCCCCCCceEEEEeecCcEEEEeecccchhhhcc
Q 000080 2351 TLAPPTSSRASITCHEGLYDLFLPLKLLNFALSK 2384 (2389)
Q Consensus 2351 ~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~s~ 2384 (2389)
. .++.+.++..+ +...+++..+.|+..+.-
T Consensus 153 ~---~G~~~w~~~~~-~~~~~~~~~~~g~~~v~~ 182 (276)
T 3no2_A 153 P---NGQLLNSVKLS-GTPFSSAFLDNGDCLVAC 182 (276)
T ss_dssp T---TSCEEEEEECS-SCCCEEEECTTSCEEEEC
T ss_pred C---CCCEEEEEECC-CCccceeEcCCCCEEEEe
Confidence 6 48888888764 456678888888876643
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.16 E-value=1.1e-05 Score=90.37 Aligned_cols=142 Identities=6% Similarity=0.028 Sum_probs=101.4
Q ss_pred eEEEEEEcCCCCeEEEEeCC---------------CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEEC----C
Q 000080 2221 STRAFSSHPLRPFFLVGSSN---------------THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFD----H 2281 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~D---------------gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFS----P 2281 (2389)
.+++++++|+|+++++.+.+ +.|..||.. |+...... +......++|+ |
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-----------~~~~~~~i~~~~~~d~ 185 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-----------AFQFPNGIAVRHMNDG 185 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-----------EESSEEEEEEEECTTS
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-----------CCCCcceEEEecccCC
Confidence 35788999999998887765 567777765 65443321 12446889999 9
Q ss_pred CCCEE-EEEeCCCcEEEeeCC-CCCccCcccceeeeecC-CCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc
Q 000080 2282 YGHRF-ASAALDGTVCTWQLE-VGGRSNVRPMESCLCFS-SHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS 2358 (2389)
Q Consensus 2282 DG~~L-ASgS~DgTVkLWDl~-tggrs~~k~l~tl~gHs-~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~ 2358 (2389)
||+.+ ++...++.|.+||++ ++.....+.+..+.++. .....+++.+ +|++.++. ..++.|.+||. .+++.
T Consensus 186 dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~---~~~~~i~~~d~--~~g~~ 259 (314)
T 1pjx_A 186 RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DNNLLVAN---WGSSHIEVFGP--DGGQP 259 (314)
T ss_dssp CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEE---ETTTEEEEECT--TCBSC
T ss_pred CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CCCEEEEE---cCCCEEEEEcC--CCCcE
Confidence 99654 555678999999986 33100001233344444 5678899999 89988874 35789999996 34667
Q ss_pred eEEEEeecCcEEEEeecccchh
Q 000080 2359 RASITCHEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2359 v~sL~GH~~~V~svA~~~~~~~ 2380 (2389)
+..+..+...+.+++++++|++
T Consensus 260 ~~~~~~~~~~~~~i~~~~dg~~ 281 (314)
T 1pjx_A 260 KMRIRCPFEKPSNLHFKPQTKT 281 (314)
T ss_dssp SEEEECSSSCEEEEEECTTSSE
T ss_pred eEEEeCCCCCceeEEECCCCCE
Confidence 7888888889999999999984
No 195
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.14 E-value=3e-05 Score=88.67 Aligned_cols=144 Identities=13% Similarity=0.022 Sum_probs=99.8
Q ss_pred eeEEEEEEcCCCCeEEEEeCC---------CcEEEeecCC-CceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEE-EE
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSN---------THIYLWEFGK-DKATATYGVLPAANVPPPYALASISALQFDHYGHRF-AS 2288 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~D---------gTIRLWDl~t-Gk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~L-AS 2288 (2389)
..+..++++|+|+++++...+ .+.+||.+.. |+...... +....+.++|+|||+.| ++
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~-----------~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD-----------QVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE-----------EESBEEEEEECTTSCEEEEE
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee-----------ccccccceEEcCCCCEEEEe
Confidence 456889999999988765332 3345665543 44332221 12446899999999865 66
Q ss_pred EeCCCcEEEeeC--CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeec
Q 000080 2289 AALDGTVCTWQL--EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHE 2366 (2389)
Q Consensus 2289 gS~DgTVkLWDl--~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~ 2366 (2389)
.+.+++|..||+ ++|..++.+.+..+..+.+....+++.+ +|++.++. ..++.|..||. .+++.+..+..+.
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~---~~~~~v~~~d~--~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVAC---YNGGRVIRLDP--VTGKRLQTVKLPV 240 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEE---ETTTEEEEECT--TTCCEEEEEECSS
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEE---cCCCEEEEEcC--CCceEEEEEECCC
Confidence 677899999997 4442111122333444456778999999 89988764 35678999996 3578889998888
Q ss_pred CcEEEEeec-ccchh
Q 000080 2367 GLYDLFLPL-KLLNF 2380 (2389)
Q Consensus 2367 ~~V~svA~~-~~~~~ 2380 (2389)
..++++++. |+++.
T Consensus 241 ~~~t~~~f~g~d~~~ 255 (297)
T 3g4e_A 241 DKTTSCCFGGKNYSE 255 (297)
T ss_dssp SBEEEEEEESGGGCE
T ss_pred CCceEEEEeCCCCCE
Confidence 899999998 88775
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.09 E-value=1.9e-05 Score=86.88 Aligned_cols=139 Identities=9% Similarity=-0.012 Sum_probs=97.1
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCC
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEV 2302 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~t 2302 (2389)
++|+++|+|+++++.. ++.|+.||...+. ...+. . +....++.++++|+|+.+++...++.|..||..+
T Consensus 70 ~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~-~~~~~---~------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 138 (270)
T 1rwi_B 70 QGLAVDGAGTVYVTDF-NNRVVTLAAGSNN-QTVLP---F------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS 138 (270)
T ss_dssp CCEEECTTCCEEEEET-TTEEEEECTTCSC-CEECC---C------CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC
T ss_pred ceeEECCCCCEEEEcC-CCEEEEEeCCCce-Eeeee---c------CCcCCCcceEECCCCCEEEEECCCCEEEEEECCC
Confidence 6789999999888766 8899999985443 33332 1 1235689999999999999988899999998765
Q ss_pred CCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhhh
Q 000080 2303 GGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2303 ggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~~ 2382 (2389)
.. ...........+.++++.| +|+++++. ..++.|.+||.. ..........+......++..++|+..+
T Consensus 139 ~~-----~~~~~~~~~~~p~~i~~~~-~g~l~v~~---~~~~~i~~~~~~--~~~~~~~~~~~~~~p~~i~~d~~g~l~v 207 (270)
T 1rwi_B 139 KT-----QTVLPFTGLNDPDGVAVDN-SGNVYVTD---TDNNRVVKLEAE--SNNQVVLPFTDITAPWGIAVDEAGTVYV 207 (270)
T ss_dssp CS-----CEECCCCSCCSCCCEEECT-TCCEEEEE---GGGTEEEEECTT--TCCEEECCCSSCCSEEEEEECTTCCEEE
T ss_pred ce-----eEeeccccCCCceeEEEeC-CCCEEEEE---CCCCEEEEEecC--CCceEeecccCCCCceEEEECCCCCEEE
Confidence 31 1111122334678899999 89988874 356899999962 2222222233446788999999986554
Q ss_pred c
Q 000080 2383 S 2383 (2389)
Q Consensus 2383 s 2383 (2389)
+
T Consensus 208 ~ 208 (270)
T 1rwi_B 208 T 208 (270)
T ss_dssp E
T ss_pred E
Confidence 4
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.97 E-value=0.00015 Score=80.07 Aligned_cols=140 Identities=8% Similarity=0.005 Sum_probs=101.8
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.+.+++++|+|.++++...++.|..||. +|+... +. .+ .+...+..++++|+|+.+++...++.|..||.
T Consensus 100 ~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~-~~-------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 100 APYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YE-LP-------NKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EE-CS-------STTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ec-CC-------CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 3488999999999998888999999998 666443 21 11 12356899999999999998888899999999
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE--EeecCcEEEEeecccc
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI--TCHEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL--~GH~~~V~svA~~~~~ 2378 (2389)
++. ... .....+...+.++++.+ +|++.++. ..++.|.+||. +++ +..+ ..+...+.+++.+++|
T Consensus 170 -~g~---~~~-~~~~~~~~~~~~i~~~~-~g~l~v~~---~~~~~i~~~~~---~g~-~~~~~~~~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 170 -SGD---ITE-FKIPTPASGPVGITKGN-DDALWFVE---IIGNKIGRITT---SGE-ITEFKIPTPNARPHAITAGAGI 236 (299)
T ss_dssp -TCC---EEE-EECSSTTCCEEEEEECT-TSSEEEEE---TTTTEEEEECT---TCC-EEEEECSSTTCCEEEEEECSTT
T ss_pred -CCc---EEE-eeCCCCCCcceeEEECC-CCCEEEEc---cCCceEEEECC---CCc-EEEEECCCCCCCceeEEECCCC
Confidence 542 111 12233456688999999 89988764 35788999996 333 3333 3355778899999998
Q ss_pred hhhhc
Q 000080 2379 NFALS 2383 (2389)
Q Consensus 2379 ~~~~s 2383 (2389)
+.-++
T Consensus 237 ~l~v~ 241 (299)
T 2z2n_A 237 DLWFT 241 (299)
T ss_dssp CEEEE
T ss_pred CEEEe
Confidence 85443
No 198
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.97 E-value=6.6e-05 Score=87.88 Aligned_cols=146 Identities=9% Similarity=0.011 Sum_probs=98.0
Q ss_pred EEEEEEcCCCCeEEEEe--CCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC-----CCc
Q 000080 2222 TRAFSSHPLRPFFLVGS--SNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL-----DGT 2294 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS--~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~-----DgT 2294 (2389)
...|+++|+|+++++.. .++.++||.+.+|+. ..| |.......+|...+..|+|+|+|+.+++-+. ++.
T Consensus 19 p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~---p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 19 PGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPF---PPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp EEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EES---CCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred cceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecC---CCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 37789999999999964 334488888865653 333 2211112356788999999999988777655 689
Q ss_pred EEEeeCCCCCccCcccceeee------ecCCCeeEEEEecCCCCEEEEeecCC---CCCeEEEeeCCCCCCCceEEEEee
Q 000080 2295 VCTWQLEVGGRSNVRPMESCL------CFSSHAMDVSYITSSGSVIAAAGHSS---NGINVVVWDTLAPPTSSRASITCH 2365 (2389)
Q Consensus 2295 VkLWDl~tggrs~~k~l~tl~------gHs~~V~sVAFSP~DGslLASAG~sS---~D~TVrLWD~l~~tg~~v~sL~GH 2365 (2389)
|..||++++. .+.++. .+....+++++.|++|..+++. + .++.|.+||+ .+++..+.+.+|
T Consensus 95 i~~~d~~tg~-----~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd---~~~~~~~~i~v~d~--~~g~~~r~~~~~ 164 (343)
T 2qe8_A 95 LVAWDTLNNQ-----LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISD---PAPDDKAALIRVDL--QTGLAARVLQGY 164 (343)
T ss_dssp EEEEETTTTE-----EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEE---CCSGGGCEEEEEET--TTCCEEEECTTC
T ss_pred EEEEECCCCe-----EEEEEECChhhcccccccceEEEecCCCEEEEEc---CccCCCCeEEEEEC--CCCCEEEEecCC
Confidence 9999999862 223222 2334678999998456666653 3 5789999997 344444444443
Q ss_pred c-----------------------------CcEEEEeecccchhh
Q 000080 2366 E-----------------------------GLYDLFLPLKLLNFA 2381 (2389)
Q Consensus 2366 ~-----------------------------~~V~svA~~~~~~~~ 2381 (2389)
. ..+..+|.+|+|++.
T Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~l 209 (343)
T 2qe8_A 165 PGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWL 209 (343)
T ss_dssp TTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEE
T ss_pred CcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEE
Confidence 1 246789999999754
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.96 E-value=0.00014 Score=92.74 Aligned_cols=142 Identities=6% Similarity=-0.028 Sum_probs=101.1
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecC--CCceeeEecccCCCCCCCCCCCCCEEEEEEC----CCCCEEEEEe-CCCc
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFG--KDKATATYGVLPAANVPPPYALASISALQFD----HYGHRFASAA-LDGT 2294 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~--tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFS----PDG~~LASgS-~DgT 2294 (2389)
+..++|+|||+++.+++.|++|.+||+. +++.+.++.+ | ..-+.++|| |||+++.++. .+++
T Consensus 199 p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~---------G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~ 267 (567)
T 1qks_A 199 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI---------G--SEARSIETSKMEGWEDKYAIAGAYWPPQ 267 (567)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC---------C--SEEEEEEECCSTTCTTTEEEEEEEETTE
T ss_pred ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec---------C--CCCceeEEccccCCCCCEEEEEEccCCe
Confidence 4678999999999999999999999995 7777777641 1 236899999 7998777766 4599
Q ss_pred EEEeeCCCCCccCcccceeee--e--------cC-CCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc--eEE
Q 000080 2295 VCTWQLEVGGRSNVRPMESCL--C--------FS-SHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS--RAS 2361 (2389)
Q Consensus 2295 VkLWDl~tggrs~~k~l~tl~--g--------Hs-~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~--v~s 2361 (2389)
|.++|..+. +++.+.. + |. ..+..+.++++....+++. .++++|.++|+. +.+. +..
T Consensus 268 v~ViD~~t~-----~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~---~~~g~v~~vd~~--~~~~~~v~~ 337 (567)
T 1qks_A 268 YVIMDGETL-----EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV---KETGKILLVDYT--DLNNLKTTE 337 (567)
T ss_dssp EEEEETTTC-----CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE---TTTTEEEEEETT--CSSEEEEEE
T ss_pred EEEEECCCC-----cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe---cCCCeEEEEecC--CCccceeee
Confidence 999998875 2333322 1 22 2678899998434445443 578999999983 2222 333
Q ss_pred EEeecCcEEEEeecccchhhhccc
Q 000080 2362 ITCHEGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2362 L~GH~~~V~svA~~~~~~~~~s~~ 2385 (2389)
+. .......++++++|++++.-|
T Consensus 338 i~-~~~~~~d~~~~pdgr~~~va~ 360 (567)
T 1qks_A 338 IS-AERFLHDGGLDGSHRYFITAA 360 (567)
T ss_dssp EE-CCSSEEEEEECTTSCEEEEEE
T ss_pred ee-ccccccCceECCCCCEEEEEe
Confidence 32 334456788999999987655
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.94 E-value=9e-05 Score=94.34 Aligned_cols=128 Identities=12% Similarity=0.005 Sum_probs=95.5
Q ss_pred CCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC--CCCcc
Q 000080 2229 PLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE--VGGRS 2306 (2389)
Q Consensus 2229 PdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~--tggrs 2306 (2389)
|.+.++++.+.|++|.++|..+++.+.++.+ | ..+..++|||||+++.+++.|++|.+||+. ++
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~---------g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--- 230 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT---------G--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--- 230 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC---------S--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC---
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC---------C--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCC---
Confidence 4556788899999999999999998888741 1 347799999999999999999999999996 54
Q ss_pred CcccceeeeecCCCeeEEEEec---CCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEe----------ecC-cEEEE
Q 000080 2307 NVRPMESCLCFSSHAMDVSYIT---SSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITC----------HEG-LYDLF 2372 (2389)
Q Consensus 2307 ~~k~l~tl~gHs~~V~sVAFSP---~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~G----------H~~-~V~sv 2372 (2389)
+.+.++.. ....+.++|++ +||++++.+. ..+++|.|+|. .+.+.++.+.- |.. .+..+
T Consensus 231 --~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n--~~~~~v~ViD~--~t~~~~~~i~~~~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 231 --TTVAEIKI-GSEARSIETSKMEGWEDKYAIAGA--YWPPQYVIMDG--ETLEPKKIQSTRGMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp --CEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEE--EETTEEEEEET--TTCCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred --cEeEEEec-CCCCceeEEccccCCCCCEEEEEE--ccCCeEEEEEC--CCCcEEEEEeccccccccccccCCCceEEE
Confidence 34444443 23467899993 3999988874 47799999996 46666666541 333 45556
Q ss_pred eeccc
Q 000080 2373 LPLKL 2377 (2389)
Q Consensus 2373 A~~~~ 2377 (2389)
..+++
T Consensus 304 ~~s~~ 308 (567)
T 1qks_A 304 LASHY 308 (567)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 65554
No 201
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.94 E-value=0.00014 Score=84.59 Aligned_cols=144 Identities=10% Similarity=-0.001 Sum_probs=96.1
Q ss_pred eeEEEEEEcCCCCeEEEEeCC----CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEE-EEeCCCc
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSN----THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFA-SAALDGT 2294 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~D----gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LA-SgS~DgT 2294 (2389)
..+..++++|+|+++++...+ .+.+||.+.+|+...... +......++|+|||+.|. +.+.++.
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~-----------~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-----------DISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-----------EESSEEEEEECTTSCEEEEEETTTCE
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeC-----------CCcccCCeEEcCCCCEEEEEECCCCE
Confidence 356899999999987765432 234444443555432221 124468999999998764 4456799
Q ss_pred EEEeeCC--CC-CccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEE
Q 000080 2295 VCTWQLE--VG-GRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDL 2371 (2389)
Q Consensus 2295 VkLWDl~--tg-grs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~s 2371 (2389)
|.+||+. +| .....+.+..+..+......+++.+ +|.+.++. ..++.|..||. +++.+..+..+...+++
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~---~~~~~v~~~d~---~g~~~~~i~~~~~~~~~ 275 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNAR---WGEGAVDRYDT---DGNHIARYEVPGKQTTC 275 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEE---ETTTEEEEECT---TCCEEEEEECSCSBEEE
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEE---eCCCEEEEECC---CCCEEEEEECCCCCcEE
Confidence 9999986 44 2111122333333345677899998 88887764 24678999995 56677888888888999
Q ss_pred Eeec-ccchhh
Q 000080 2372 FLPL-KLLNFA 2381 (2389)
Q Consensus 2372 vA~~-~~~~~~ 2381 (2389)
+++. ++++..
T Consensus 276 ~af~g~d~~~L 286 (326)
T 2ghs_A 276 PAFIGPDASRL 286 (326)
T ss_dssp EEEESTTSCEE
T ss_pred EEEecCCCCEE
Confidence 9998 887643
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.93 E-value=0.0002 Score=79.19 Aligned_cols=139 Identities=4% Similarity=-0.096 Sum_probs=102.6
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.+..+++.|+|.++++...++.|..||. +|+... +. ++. +...+.+++++|+|+.+++...++.|..||.
T Consensus 142 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~-~~~-------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 142 YPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-FK-IPT-------PASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EE-CSS-------TTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE-ee-CCC-------CCCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 3488999999999998888899999998 776543 21 111 2356899999999999998888999999999
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE--EeecCcEEEEeecccc
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI--TCHEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL--~GH~~~V~svA~~~~~ 2378 (2389)
++. ........+...+.++++.+ +|++.++. ..++.|..||. ++ .+..+ .++...+.+++. ++|
T Consensus 212 -~g~----~~~~~~~~~~~~~~~i~~~~-~g~l~v~~---~~~~~i~~~d~---~g-~~~~~~~~~~~~~~~~i~~-~~g 277 (299)
T 2z2n_A 212 -SGE----ITEFKIPTPNARPHAITAGA-GIDLWFTE---WGANKIGRLTS---NN-IIEEYPIQIKSAEPHGICF-DGE 277 (299)
T ss_dssp -TCC----EEEEECSSTTCCEEEEEECS-TTCEEEEE---TTTTEEEEEET---TT-EEEEEECSSSSCCEEEEEE-CSS
T ss_pred -CCc----EEEEECCCCCCCceeEEECC-CCCEEEec---cCCceEEEECC---CC-ceEEEeCCCCCCccceEEe-cCC
Confidence 552 11122334557789999999 89988764 35788999996 23 33333 355677899999 888
Q ss_pred hhhhc
Q 000080 2379 NFALS 2383 (2389)
Q Consensus 2379 ~~~~s 2383 (2389)
+.-++
T Consensus 278 ~l~v~ 282 (299)
T 2z2n_A 278 TIWFA 282 (299)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 76554
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.88 E-value=0.00019 Score=82.03 Aligned_cols=146 Identities=8% Similarity=-0.025 Sum_probs=94.9
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC--------
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD-------- 2292 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D-------- 2292 (2389)
.+.+++++|+|+++++. +..|.+||..+|+...... .+.. .....++.++++|||+.+++...+
T Consensus 55 ~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~-~~~~-----~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~ 126 (297)
T 3g4e_A 55 PVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLAT-VDND-----KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLE 126 (297)
T ss_dssp CEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEE-CCTT-----CSSEEEEEEEECTTSCEEEEEEECCSBTTBCC
T ss_pred ceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEe-cCCC-----CCCCCCCCEEECCCCCEEEecCCccccccccc
Confidence 45889999999976653 5689999998887543322 1111 123568999999999988876443
Q ss_pred -CcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc-----eEEEEeec
Q 000080 2293 -GTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS-----RASITCHE 2366 (2389)
Q Consensus 2293 -gTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~-----v~sL~GH~ 2366 (2389)
.+-+||.+...+ ....+..+-...+.++|+| ||+.|..+. +.++.|.+||+...++.. +..+..+.
T Consensus 127 ~~~~~l~~~d~~g-----~~~~~~~~~~~pngi~~sp-dg~~lyv~~--~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~ 198 (297)
T 3g4e_A 127 RHQGALYSLFPDH-----HVKKYFDQVDISNGLDWSL-DHKIFYYID--SLSYSVDAFDYDLQTGQISNRRSVYKLEKEE 198 (297)
T ss_dssp TTCEEEEEECTTS-----CEEEEEEEESBEEEEEECT-TSCEEEEEE--GGGTEEEEEEECTTTCCEEEEEEEEECCGGG
T ss_pred CCCcEEEEEECCC-----CEEEEeeccccccceEEcC-CCCEEEEec--CCCCcEEEEeccCCCCcccCcEEEEECCCCC
Confidence 445777776533 1222333445678899999 888665443 567899999973234432 12223344
Q ss_pred CcEEEEeecccchhhh
Q 000080 2367 GLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2367 ~~V~svA~~~~~~~~~ 2382 (2389)
+....++..++|+.-+
T Consensus 199 ~~p~g~~~d~~G~lwv 214 (297)
T 3g4e_A 199 QIPDGMCIDAEGKLWV 214 (297)
T ss_dssp CEEEEEEEBTTSCEEE
T ss_pred CCCCeeEECCCCCEEE
Confidence 5677888888887444
No 204
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.88 E-value=0.0001 Score=85.94 Aligned_cols=145 Identities=4% Similarity=-0.088 Sum_probs=99.0
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe-CCCcEEEeeC
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA-LDGTVCTWQL 2300 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS-~DgTVkLWDl 2300 (2389)
.+.|+++|+|+++++...+++|.+||..+++.+.++.+ +.. .++......+++ .+|+.+++.. .+++|.++|+
T Consensus 86 p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~--g~~---~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC--PDM---DMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp EEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC--TTC---CTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEET
T ss_pred CcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc--CCc---cccCCCcceEEE-ECCEEEEEcCCCCCEEEEEEC
Confidence 38889999997777766899999999999988777642 110 122234566777 4555555554 4899999999
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCC--------CCeEEEeeCCCCCCCceEEEEeec-CcEEE
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSN--------GINVVVWDTLAPPTSSRASITCHE-GLYDL 2371 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~--------D~TVrLWD~l~~tg~~v~sL~GH~-~~V~s 2371 (2389)
+++. ...++.. .....+++++| +|++++++. +.. .++|.++|. .+++.+..+.-.. .....
T Consensus 160 ~t~~-----~~~~i~~-g~~p~~i~~~~-dG~l~v~~~-~~~~~~~~~~~~~~v~~id~--~t~~v~~~~~~~~g~~p~~ 229 (328)
T 3dsm_A 160 ETDK-----VVDELTI-GIQPTSLVMDK-YNKMWTITD-GGYEGSPYGYEAPSLYRIDA--ETFTVEKQFKFKLGDWPSE 229 (328)
T ss_dssp TTTE-----EEEEEEC-SSCBCCCEECT-TSEEEEEBC-CBCTTCSSCBCCCEEEEEET--TTTEEEEEEECCTTCCCEE
T ss_pred CCCe-----EEEEEEc-CCCccceEEcC-CCCEEEEEC-CCccCCccccCCceEEEEEC--CCCeEEEEEecCCCCCcee
Confidence 9862 3333332 23456799999 899887742 110 278999997 3555555665322 36889
Q ss_pred Eeecccchhhh
Q 000080 2372 FLPLKLLNFAL 2382 (2389)
Q Consensus 2372 vA~~~~~~~~~ 2382 (2389)
++++|+|+++.
T Consensus 230 la~~~d~~~ly 240 (328)
T 3dsm_A 230 VQLNGTRDTLY 240 (328)
T ss_dssp EEECTTSCEEE
T ss_pred EEEecCCCEEE
Confidence 99999998764
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.77 E-value=0.00015 Score=93.46 Aligned_cols=138 Identities=9% Similarity=0.019 Sum_probs=91.6
Q ss_pred EEEEEcCCCCeEEEEeCCCc--------------EEEeecCCCce--eeEecccCCCCCCCCCCCCCEEEEEECCCCCEE
Q 000080 2223 RAFSSHPLRPFFLVGSSNTH--------------IYLWEFGKDKA--TATYGVLPAANVPPPYALASISALQFDHYGHRF 2286 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgT--------------IRLWDl~tGk~--l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~L 2286 (2389)
.+++|+|| +.|+.++.|+. |++|++++++. ...+. . ++|...+.++.|||||++|
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~---~-----~~~~~~~~~~~~SpDG~~l 282 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA---T-----PELPKRGHGASVSSDGRWV 282 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC---C-----TTCTTCEEEEEECTTSCEE
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec---c-----CCCCeEEEEEEECCCCCEE
Confidence 46799999 99998887765 99999988863 23332 1 1233568999999999999
Q ss_pred EEEeCCC-----cEEEeeCCCCCccCccc-ceeeeecCCCeeEEEEecCCCCEEEEeec-CCCCCeEEEeeCCCCCCCce
Q 000080 2287 ASAALDG-----TVCTWQLEVGGRSNVRP-MESCLCFSSHAMDVSYITSSGSVIAAAGH-SSNGINVVVWDTLAPPTSSR 2359 (2389)
Q Consensus 2287 ASgS~Dg-----TVkLWDl~tggrs~~k~-l~tl~gHs~~V~sVAFSP~DGslLASAG~-sS~D~TVrLWD~l~~tg~~v 2359 (2389)
+..+.++ .|.+||++++. .. ...+..+...+.... +| +|+.|+..+- +..+..|.+||+..+.++..
T Consensus 283 ~~~~~~~~~~~~~l~~~d~~~~~----~~~~~~l~~~~~~~~~~~-~~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 356 (741)
T 1yr2_A 283 VITSSEGTDPVNTVHVARVTNGK----IGPVTALIPDLKAQWDFV-DG-VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFD 356 (741)
T ss_dssp EEEEECTTCSCCEEEEEEEETTE----ECCCEEEECSSSSCEEEE-EE-ETTEEEEEECTTCTTCEEEEEECSSSSCEEE
T ss_pred EEEEEccCCCcceEEEEECCCCC----CcccEEecCCCCceEEEE-ec-cCCEEEEEECCCCCCCEEEEEeCCCCccccE
Confidence 9988655 89999998651 12 455666666666554 47 7888776531 11245699999731111223
Q ss_pred EEEEeecCcEEEEeec
Q 000080 2360 ASITCHEGLYDLFLPL 2375 (2389)
Q Consensus 2360 ~sL~GH~~~V~svA~~ 2375 (2389)
..+..|...+..++++
T Consensus 357 ~l~~~~~~~l~~~~~~ 372 (741)
T 1yr2_A 357 TVVPESKDNLESVGIA 372 (741)
T ss_dssp EEECCCSSEEEEEEEE
T ss_pred EEecCCCCeEEEEEEE
Confidence 3445555556677776
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.76 E-value=0.00031 Score=78.84 Aligned_cols=114 Identities=9% Similarity=0.158 Sum_probs=83.6
Q ss_pred EEEEEc----CCCCe-EEEEeCCCcEEEeecC-CCcee--eEecccCCCCCCCCCCC-CCEEEEEECCCCCEEEEEeCCC
Q 000080 2223 RAFSSH----PLRPF-FLVGSSNTHIYLWEFG-KDKAT--ATYGVLPAANVPPPYAL-ASISALQFDHYGHRFASAALDG 2293 (2389)
Q Consensus 2223 rsVAFs----PdG~~-LASGS~DgTIRLWDl~-tGk~l--~Tl~vl~gh~~p~~GH~-~~V~sVaFSPDG~~LASgS~Dg 2293 (2389)
..++++ |+|+. +++.+.++.|++||.. +|+.. ..+..++ ++. ..+..++++++|+.+++...++
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-------~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP-------GTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC-------CCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC-------CCCCCCCCceEECCCCCEEEEEcCCC
Confidence 678999 99964 5666678999999986 45421 1222111 233 5578999999999999999999
Q ss_pred cEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeC
Q 000080 2294 TVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDT 2351 (2389)
Q Consensus 2294 TVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~ 2351 (2389)
.|..||.+++ +.+..+..+...+.+++|+| +|+.|..++ ..++.|..||+
T Consensus 248 ~i~~~d~~~g-----~~~~~~~~~~~~~~~i~~~~-dg~~l~v~~--~~~~~l~~~~~ 297 (314)
T 1pjx_A 248 HIEVFGPDGG-----QPKMRIRCPFEKPSNLHFKP-QTKTIFVTE--HENNAVWKFEW 297 (314)
T ss_dssp EEEEECTTCB-----SCSEEEECSSSCEEEEEECT-TSSEEEEEE--TTTTEEEEEEC
T ss_pred EEEEEcCCCC-----cEeEEEeCCCCCceeEEECC-CCCEEEEEe--CCCCeEEEEeC
Confidence 9999999865 23445556667899999998 888444332 46678999997
No 207
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.74 E-value=0.00044 Score=80.61 Aligned_cols=126 Identities=6% Similarity=-0.028 Sum_probs=90.2
Q ss_pred EEEEEcCCCCeEEEEeCC----------CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC
Q 000080 2223 RAFSSHPLRPFFLVGSSN----------THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD 2292 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~D----------gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D 2292 (2389)
..++++|+|++++++..+ ++|.++|..+++.+.++.. +. | ...+.++|+|||++|-.+..
T Consensus 175 ~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~-~~------g--~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 175 TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF-KL------G--DWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC-CT------T--CCCEEEEECTTSCEEEEESS-
T ss_pred cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec-CC------C--CCceeEEEecCCCEEEEEcc-
Confidence 456999999988887765 8999999999988777641 11 1 35799999999998888765
Q ss_pred CcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecC-CCCCeEEEeeCCCCCCCceEEEEee
Q 000080 2293 GTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHS-SNGINVVVWDTLAPPTSSRASITCH 2365 (2389)
Q Consensus 2293 gTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~s-S~D~TVrLWD~l~~tg~~v~sL~GH 2365 (2389)
+|.+||++++. . ........+......++++|++|.+.++...+ ..+++|.+||. .++.++++.--
T Consensus 245 -~v~~~d~~t~~--~-~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~---~g~~~~~i~~G 311 (328)
T 3dsm_A 245 -DIWRMPVEADR--V-PVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP---QGKLIDEFYVG 311 (328)
T ss_dssp -SEEEEETTCSS--C-CSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT---TCCEEEEEEEE
T ss_pred -EEEEEECCCCc--e-eeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC---CCCEEEEEEec
Confidence 99999998863 1 11111111245688999999677777763000 25789999996 37778887643
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.73 E-value=0.00024 Score=91.34 Aligned_cols=143 Identities=8% Similarity=0.025 Sum_probs=96.9
Q ss_pred EEEEEcCCCCeEEEEeCCCc-------------EEEeecCCCce--eeEecccCCCCCCCCC-CCCCEEEEEECCCCCEE
Q 000080 2223 RAFSSHPLRPFFLVGSSNTH-------------IYLWEFGKDKA--TATYGVLPAANVPPPY-ALASISALQFDHYGHRF 2286 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgT-------------IRLWDl~tGk~--l~Tl~vl~gh~~p~~G-H~~~V~sVaFSPDG~~L 2286 (2389)
.+++|+ ||+.|+.++.|.. |++|++++++. +..+.. .+ |..++.+++|||||++|
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~--------~~~~~~~~~~~~~SpDg~~l 248 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA--------IPAQHHRYVGATVTEDDRFL 248 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESC--------SGGGCCSEEEEEECTTSCEE
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEec--------CCCCCeEEEEEEEcCCCCEE
Confidence 467999 9999999998854 99999988764 333321 12 33568899999999988
Q ss_pred EEEeC----CCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc--eE
Q 000080 2287 ASAAL----DGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS--RA 2360 (2389)
Q Consensus 2287 ASgS~----DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~--v~ 2360 (2389)
+..+. ++.|.+||++++. .....+..+....... ++++++.+++++..+.....|.+||+. ++.. .+
T Consensus 249 ~~~~~~~~~~~~i~~~d~~~~~----~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~--~~~~~~~~ 321 (693)
T 3iuj_A 249 LISAANSTSGNRLYVKDLSQEN----APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAA--NPGPAHWR 321 (693)
T ss_dssp EEEEESSSSCCEEEEEETTSTT----CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETT--SCCGGGCE
T ss_pred EEEEccCCCCcEEEEEECCCCC----CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC--CCCccccE
Confidence 65443 3589999998752 2456667777766665 566344555554211123678889973 3333 46
Q ss_pred EEEeecCcEEEEeecccchhhhc
Q 000080 2361 SITCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2361 sL~GH~~~V~svA~~~~~~~~~s 2383 (2389)
.|..|...+. +++++|++++.
T Consensus 322 ~l~~~~~~~~--~~s~~g~~lv~ 342 (693)
T 3iuj_A 322 DLIPERQQVL--TVHSGSGYLFA 342 (693)
T ss_dssp EEECCCSSCE--EEEEETTEEEE
T ss_pred EEecCCCCEE--EEEEECCEEEE
Confidence 7888887776 77888887653
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.63 E-value=0.0013 Score=72.70 Aligned_cols=141 Identities=7% Similarity=-0.019 Sum_probs=100.6
Q ss_pred eEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeC
Q 000080 2221 STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2221 ~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl 2300 (2389)
.+..+++.|+|.++++...++.|..+|.. |+.. .+. ++. ....+..++++|+|+.+++...++.|..+|.
T Consensus 105 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~-~~~-------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 105 GPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYD-LPN-------KGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEE-CSS-------TTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred CCccceECCCCCEEEEccCCCeEEEECCC-CCEE-Ecc-CCC-------CCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 34889999999999988878999999986 6654 232 111 2356899999999998888888899999998
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceE-EEEeecCcEEEEeecccch
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRA-SITCHEGLYDLFLPLKLLN 2379 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~-sL~GH~~~V~svA~~~~~~ 2379 (2389)
++. ........+...+.++++.+ +|++.++. ..++.|.++|. +++... .+..+...+.+++..++|+
T Consensus 175 -~g~----~~~~~~~~~~~~~~~i~~d~-~g~l~v~~---~~~~~i~~~~~---~g~~~~~~~~~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 175 -TGK----LEEYPLPTNAAAPVGITSGN-DGALWFVE---IMGNKIGRITT---TGEISEYDIPTPNARPHAITAGKNSE 242 (300)
T ss_dssp -TCC----EEEEECSSTTCCEEEEEECT-TSSEEEEE---TTTTEEEEECT---TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred -CCc----EEEeeCCCCCCCcceEEECC-CCCEEEEc---cCCCEEEEEcC---CCcEEEEECCCCCCCceEEEECCCCC
Confidence 442 11122233456788999999 89988764 35678999996 333322 2334556788999999987
Q ss_pred hhhc
Q 000080 2380 FALS 2383 (2389)
Q Consensus 2380 ~~~s 2383 (2389)
--++
T Consensus 243 l~v~ 246 (300)
T 2qc5_A 243 IWFT 246 (300)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4443
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.60 E-value=0.00072 Score=78.71 Aligned_cols=144 Identities=9% Similarity=-0.004 Sum_probs=90.6
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC----CcEEE
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD----GTVCT 2297 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D----gTVkL 2297 (2389)
+.+++++|+|+++++. .+ .|.+||..+|+...... .+.. .....++.++++|||+.+++...+ ++..|
T Consensus 92 v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~-~~~~-----~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l 163 (326)
T 2ghs_A 92 GSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE-LESD-----LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSI 163 (326)
T ss_dssp EEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC-SSTT-----CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEE
T ss_pred ceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee-CCCC-----CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEE
Confidence 5888999999988864 44 49999998887543221 1110 112568999999999988766532 34556
Q ss_pred eeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCC-Cc--eEEE---EeecCcEEE
Q 000080 2298 WQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPT-SS--RASI---TCHEGLYDL 2371 (2389)
Q Consensus 2298 WDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg-~~--v~sL---~GH~~~V~s 2371 (2389)
|.+.++ + +..+..+....+.++|+| ||+.|..+. +.++.|.+||+...++ +. .+.+ ..+.+....
T Consensus 164 ~~~~~g-~-----~~~~~~~~~~~~~i~~s~-dg~~lyv~~--~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~g 234 (326)
T 2ghs_A 164 YHVAKG-K-----VTKLFADISIPNSICFSP-DGTTGYFVD--TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDG 234 (326)
T ss_dssp EEEETT-E-----EEEEEEEESSEEEEEECT-TSCEEEEEE--TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEE
T ss_pred EEEeCC-c-----EEEeeCCCcccCCeEEcC-CCCEEEEEE--CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCe
Confidence 655433 1 222223334678899999 888765543 4678999999731233 21 1222 223455677
Q ss_pred Eeecccchhhh
Q 000080 2372 FLPLKLLNFAL 2382 (2389)
Q Consensus 2372 vA~~~~~~~~~ 2382 (2389)
++..++|+.-+
T Consensus 235 i~~d~~G~lwv 245 (326)
T 2ghs_A 235 SVCDAEGHIWN 245 (326)
T ss_dssp EEECTTSCEEE
T ss_pred eEECCCCCEEE
Confidence 88888887544
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.60 E-value=0.0013 Score=72.66 Aligned_cols=139 Identities=9% Similarity=0.023 Sum_probs=100.2
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
.++|++.++|+++++...++.|..||.. ++.. .+. ++ .+...+.+|+++++|+.+++...++.|..+|..
T Consensus 22 p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~-~~-------~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 22 PYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFE-VP-------TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEE-CS-------STTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred cceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEE-CC-------CCCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 4889999999999988889999999986 6543 332 12 123679999999999999988888999999987
Q ss_pred CCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceE-EEEeecCcEEEEeecccchh
Q 000080 2302 VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRA-SITCHEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2302 tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~-sL~GH~~~V~svA~~~~~~~ 2380 (2389)
+. ............+.++++.+ +|++.++. ..++.|..+|. .++... .+......+..++..++|+.
T Consensus 92 -g~----~~~~~~~~~~~~~~~i~~~~-~g~l~v~~---~~~~~i~~~~~---~g~~~~~~~~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 92 -GG----FTEYPLPQPDSGPYGITEGL-NGDIWFTQ---LNGDRIGKLTA---DGTIYEYDLPNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp -SC----EEEEECSSTTCCEEEEEECS-TTCEEEEE---TTTTEEEEECT---TSCEEEEECSSTTCCEEEEEECTTSSE
T ss_pred -CC----eEEecCCCCCCCCccceECC-CCCEEEEc---cCCCeEEEECC---CCCEEEccCCCCCCCceeEEECCCCCE
Confidence 42 11122222446788999998 89988864 35778999996 233321 22323456888999998874
Q ss_pred hh
Q 000080 2381 AL 2382 (2389)
Q Consensus 2381 ~~ 2382 (2389)
.+
T Consensus 160 ~v 161 (300)
T 2qc5_A 160 WF 161 (300)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.49 E-value=0.00067 Score=79.38 Aligned_cols=153 Identities=5% Similarity=-0.013 Sum_probs=100.1
Q ss_pred EEEEEEcCC-CCeEEEEe---CCCcEEEeecCCCceeeEecccCCCC-C-C------CCC--------------CCCCEE
Q 000080 2222 TRAFSSHPL-RPFFLVGS---SNTHIYLWEFGKDKATATYGVLPAAN-V-P------PPY--------------ALASIS 2275 (2389)
Q Consensus 2222 VrsVAFsPd-G~~LASGS---~DgTIRLWDl~tGk~l~Tl~vl~gh~-~-p------~~G--------------H~~~V~ 2275 (2389)
...|+++|+ |..+++.+ .++.|++||+.+|+..+.+. +|. + + ..| -...+.
T Consensus 122 ~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~---~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 198 (343)
T 2qe8_A 122 VNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ---GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVN 198 (343)
T ss_dssp CCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT---TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEE
T ss_pred cceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec---CCCcccccccceeECCEEEEeccCCCceeceecccc
Confidence 367799986 55667776 78999999998888766552 221 0 0 000 012468
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeeCCCC----Cc-cCcccc--eeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEE
Q 000080 2276 ALQFDHYGHRFASAALDGTVCTWQLEVG----GR-SNVRPM--ESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVV 2348 (2389)
Q Consensus 2276 sVaFSPDG~~LASgS~DgTVkLWDl~tg----gr-s~~k~l--~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrL 2348 (2389)
.|+|||||++|..++.+++ +||.+.+. +. +..+.. ....++.+....+++++ +|.++++. ..++.|.+
T Consensus 199 gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~---~~~~~V~~ 273 (343)
T 2qe8_A 199 GIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGD---LAHSAIGV 273 (343)
T ss_dssp EEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEE---GGGTEEEE
T ss_pred eeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEc---cCCCeEEE
Confidence 8999999999999988876 77766431 00 000001 12235556667899999 89998874 57889999
Q ss_pred eeCCCCCCCceEEEEee--cCcEEEEeecccchhhhccc
Q 000080 2349 WDTLAPPTSSRASITCH--EGLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2349 WD~l~~tg~~v~sL~GH--~~~V~svA~~~~~~~~~s~~ 2385 (2389)
||. .+++ +..+... -....++++.++|+..++-+
T Consensus 274 ~d~--~~G~-~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 274 ITS--ADRA-YKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EET--TTTE-EEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred EEC--CCCC-EEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 995 2344 4444433 45688999999887555443
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.45 E-value=0.0012 Score=80.18 Aligned_cols=143 Identities=8% Similarity=-0.056 Sum_probs=96.4
Q ss_pred EEEcCCCCeEEEEeCCC--cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCC
Q 000080 2225 FSSHPLRPFFLVGSSNT--HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEV 2302 (2389)
Q Consensus 2225 VAFsPdG~~LASGS~Dg--TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~t 2302 (2389)
++|+|+|+.|+.+..++ .|..||...+.....+..... .+...+++++|+|++..|..+..+++|+.||.++
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~------~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~ 249 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGS------TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKT 249 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCT------TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTT
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccc------hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCC
Confidence 79999999988888766 799999876665444421111 1235678999999544444478889999999987
Q ss_pred CCccCccccee--eeecCCCe-e-EEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeec------------
Q 000080 2303 GGRSNVRPMES--CLCFSSHA-M-DVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHE------------ 2366 (2389)
Q Consensus 2303 ggrs~~k~l~t--l~gHs~~V-~-sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~------------ 2366 (2389)
+.. ..+.. ..++.... . .++|+|.+|.++++- +.++.|+.||. .++ +..+.|+.
T Consensus 250 ~~~---~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d---~~~~~I~~~~~---~g~-~~~~~g~~~~~g~~dg~~~~ 319 (409)
T 3hrp_A 250 QEV---TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD---QNLSSVYKITP---DGE-CEWFCGSATQKTVQDGLREE 319 (409)
T ss_dssp CCE---EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE---TTTTEEEEECT---TCC-EEEEEECTTCCSCBCEEGGG
T ss_pred CCE---EEEecccccCCCCCCccccEEEeCCCCEEEEEe---CCCCEEEEEec---CCC-EEEEEeCCCCCCcCCCcccc
Confidence 521 11111 12233332 2 899999557777763 57889999996 333 66677764
Q ss_pred ---CcEEEEeecccchhhhc
Q 000080 2367 ---GLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2367 ---~~V~svA~~~~~~~~~s 2383 (2389)
+....++++++|+..++
T Consensus 320 ~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 320 ALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp CBCSSEEEEEECTTCCEEEE
T ss_pred cEeCCCeEEEEeCCCCEEEE
Confidence 45778999999985554
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.45 E-value=0.0015 Score=79.47 Aligned_cols=140 Identities=9% Similarity=-0.035 Sum_probs=97.1
Q ss_pred EEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCE--EEEEECC-CCCEEEEEeCCCcEEEe
Q 000080 2223 RAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASI--SALQFDH-YGHRFASAALDGTVCTW 2298 (2389)
Q Consensus 2223 rsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V--~sVaFSP-DG~~LASgS~DgTVkLW 2298 (2389)
+.++++| +|.+++ +..+++|+.||..++... .+...+ ..++...- ..++|+| +|+.+++-..+++|+.|
T Consensus 222 ~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~-~~~~~~-----~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~ 294 (409)
T 3hrp_A 222 GAVALDETEEWLYF-VDSNKNFGRFNVKTQEVT-LIKQLE-----LSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKI 294 (409)
T ss_dssp CBCEECTTSSEEEE-ECTTCEEEEEETTTCCEE-EEEECC-----CCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCeEEE-EECCCcEEEEECCCCCEE-EEeccc-----ccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 6679999 566555 567889999999877632 331110 01122222 3999999 57888888889999999
Q ss_pred eCCCCCccCcccceeeeecC---------------CCeeEEEEecCCCCEEEEeecCC-CCCeEEEeeCCCCCCCceEEE
Q 000080 2299 QLEVGGRSNVRPMESCLCFS---------------SHAMDVSYITSSGSVIAAAGHSS-NGINVVVWDTLAPPTSSRASI 2362 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gHs---------------~~V~sVAFSP~DGslLASAG~sS-~D~TVrLWD~l~~tg~~v~sL 2362 (2389)
|.... +..+.++. .....++|+| +|+++++- + .++.|+.||+ ++ ..+.++
T Consensus 295 ~~~g~-------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad---~~~~~~I~~~~~--~~-G~v~~~ 360 (409)
T 3hrp_A 295 TPDGE-------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVD---GFKGYCLRKLDI--LD-GYVSTV 360 (409)
T ss_dssp CTTCC-------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEE---TTTTCEEEEEET--TT-TEEEEE
T ss_pred ecCCC-------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEe---CCCCCEEEEEEC--CC-CEEEEE
Confidence 87631 23333432 3578999999 89988763 6 7889999996 23 347788
Q ss_pred Eee---------------cCcEEEEeecccchhhhc
Q 000080 2363 TCH---------------EGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2363 ~GH---------------~~~V~svA~~~~~~~~~s 2383 (2389)
.|+ -+....||.+++|+..++
T Consensus 361 ~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVa 396 (409)
T 3hrp_A 361 AGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIA 396 (409)
T ss_dssp EECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEE
T ss_pred eCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEE
Confidence 887 245789999999876554
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.41 E-value=0.002 Score=73.82 Aligned_cols=138 Identities=7% Similarity=-0.075 Sum_probs=92.1
Q ss_pred EEEEEcCCCC-eEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2223 RAFSSHPLRP-FFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2223 rsVAFsPdG~-~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
...+|+|+|+ ++.++..++.|..|+. +|+ +..+.. +...+..++++|||+.+++...++.|.+||..
T Consensus 48 egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~----------~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLD----------ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEE----------SCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeC----------CCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 5569999999 7788889999999998 565 334431 12568999999999988887788999999986
Q ss_pred CCCccCccccee-eee-cCCCeeEEEEecCCCCEEEEe---ecCC-----------CCCeEEEeeCCCCCCCceEEEEee
Q 000080 2302 VGGRSNVRPMES-CLC-FSSHAMDVSYITSSGSVIAAA---GHSS-----------NGINVVVWDTLAPPTSSRASITCH 2365 (2389)
Q Consensus 2302 tggrs~~k~l~t-l~g-Hs~~V~sVAFSP~DGslLASA---G~sS-----------~D~TVrLWD~l~~tg~~v~sL~GH 2365 (2389)
+. ...+.. ..+ ....++++++.| +|++.+|- |... ..+.|..+|. .+++ +..+. +
T Consensus 116 -g~---~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~--~~g~-~~~~~-~ 186 (305)
T 3dr2_A 116 -GQ---AHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP--DGSP-LQRMA-D 186 (305)
T ss_dssp -SC---EEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS--SSCC-CEEEE-E
T ss_pred -CC---EEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcC--CCCc-EEEEe-c
Confidence 42 111111 111 123467899999 99999872 1100 0234555664 2343 33344 5
Q ss_pred cCcEEEEeecccchhh
Q 000080 2366 EGLYDLFLPLKLLNFA 2381 (2389)
Q Consensus 2366 ~~~V~svA~~~~~~~~ 2381 (2389)
......++++|+|++.
T Consensus 187 ~~~p~gl~~spdg~~l 202 (305)
T 3dr2_A 187 LDHPNGLAFSPDEQTL 202 (305)
T ss_dssp ESSEEEEEECTTSSEE
T ss_pred CCCCcceEEcCCCCEE
Confidence 5667889999999853
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.32 E-value=0.00075 Score=77.29 Aligned_cols=135 Identities=10% Similarity=0.024 Sum_probs=91.3
Q ss_pred EEEEEcCCCCeEEE----EeC-------------CCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCE
Q 000080 2223 RAFSSHPLRPFFLV----GSS-------------NTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHR 2285 (2389)
Q Consensus 2223 rsVAFsPdG~~LAS----GS~-------------DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~ 2285 (2389)
..++++|+|++++| |.. .+.|..+|..+|+...... ......++|+|||+.
T Consensus 134 ~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~------------~~~p~gl~~spdg~~ 201 (305)
T 3dr2_A 134 NDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMAD------------LDHPNGLAFSPDEQT 201 (305)
T ss_dssp CCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEE------------ESSEEEEEECTTSSE
T ss_pred CCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEec------------CCCCcceEEcCCCCE
Confidence 56799999999997 442 2568888876676433211 134688999999998
Q ss_pred EEEEeCC------CcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCce
Q 000080 2286 FASAALD------GTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSR 2359 (2389)
Q Consensus 2286 LASgS~D------gTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v 2359 (2389)
|..+..+ +.|..||+..++....+.+.. ...+....+++.+ +|++.+++ .+ .|.+||. .++.+
T Consensus 202 lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~--~~~~~pdgi~~d~-~G~lwv~~----~~-gv~~~~~---~g~~~ 270 (305)
T 3dr2_A 202 LYVSQTPEQGHGSVEITAFAWRDGALHDRRHFAS--VPDGLPDGFCVDR-GGWLWSSS----GT-GVCVFDS---DGQLL 270 (305)
T ss_dssp EEEEECCC---CCCEEEEEEEETTEEEEEEEEEC--CSSSCCCSEEECT-TSCEEECC----SS-EEEEECT---TSCEE
T ss_pred EEEEecCCcCCCCCEEEEEEecCCCccCCeEEEE--CCCCCCCeEEECC-CCCEEEec----CC-cEEEECC---CCCEE
Confidence 8777765 789999987531000011111 1234455688999 89977652 33 4999995 57777
Q ss_pred EEEEeecCcEEEEeecccchhh
Q 000080 2360 ASITCHEGLYDLFLPLKLLNFA 2381 (2389)
Q Consensus 2360 ~sL~GH~~~V~svA~~~~~~~~ 2381 (2389)
..+..+. .+.++++.++++..
T Consensus 271 ~~~~~~~-~~~~~~f~~d~~~L 291 (305)
T 3dr2_A 271 GHIPTPG-TASNCTFDQAQQRL 291 (305)
T ss_dssp EEEECSS-CCCEEEECTTSCEE
T ss_pred EEEECCC-ceeEEEEeCCCCEE
Confidence 8887655 68889998888643
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.21 E-value=0.0019 Score=79.13 Aligned_cols=117 Identities=12% Similarity=-0.016 Sum_probs=83.9
Q ss_pred EEcCCCCeEEEEeC-----CCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe----------
Q 000080 2226 SSHPLRPFFLVGSS-----NTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA---------- 2290 (2389)
Q Consensus 2226 AFsPdG~~LASGS~-----DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS---------- 2290 (2389)
...|+++.+..... +++|.+.|..+++.+.++.+ |. .. . |+|||||+++..++
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v---------G~-~P-~-va~spDG~~lyVan~~~~r~~~G~ 106 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG---------GF-LP-N-PVVADDGSFIAHASTVFSRIARGE 106 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE---------CS-SC-E-EEECTTSSCEEEEEEEEEETTEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC---------CC-CC-c-EEECCCCCEEEEEcccccccccCC
Confidence 56899997666554 68999999999998888742 22 22 4 99999999887765
Q ss_pred CCCcEEEeeCCCCCccCcccceeeeec-------CCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE
Q 000080 2291 LDGTVCTWQLEVGGRSNVRPMESCLCF-------SSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT 2363 (2389)
Q Consensus 2291 ~DgTVkLWDl~tggrs~~k~l~tl~gH-------s~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~ 2363 (2389)
.+++|.+||..+. +.+.++.-- ...-..++|+| ||++|..+.. ..+++|.++|+ .+++.+.++.
T Consensus 107 ~~~~VsviD~~t~-----~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~-~~~~~VsVID~--~t~~vv~tI~ 177 (386)
T 3sjl_D 107 RTDYVEVFDPVTL-----LPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQF-SPAPAVGVVDL--EGKAFKRMLD 177 (386)
T ss_dssp EEEEEEEECTTTC-----CEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEEC-SSSCEEEEEET--TTTEEEEEEE
T ss_pred CCCEEEEEECCCC-----eEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEc-CCCCeEEEEEC--CCCcEEEEEE
Confidence 4789999999986 344444211 12345699999 9998776531 13689999998 4666666664
No 218
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.21 E-value=0.00088 Score=87.42 Aligned_cols=115 Identities=8% Similarity=-0.019 Sum_probs=76.4
Q ss_pred eEEEEEEc-CCCCeEEEEe-----CCCcEEEeecCCC-ceeeE-ecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC
Q 000080 2221 STRAFSSH-PLRPFFLVGS-----SNTHIYLWEFGKD-KATAT-YGVLPAANVPPPYALASISALQFDHYGHRFASAALD 2292 (2389)
Q Consensus 2221 ~VrsVAFs-PdG~~LASGS-----~DgTIRLWDl~tG-k~l~T-l~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D 2292 (2389)
.+.+.+|| |||++||-+. +..+|+++|+.+| +.+.. +. ....+++|+|||+.|+-.+.|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-------------~~~~~~~WspDg~~l~y~~~d 241 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-------------GTNGEIVWGPDHTSLFYVTKD 241 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-------------EECSCCEECSSTTEEEEEEEC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-------------CceeeEEEecCCCEEEEEEEC
Confidence 45778999 9999888443 3346999999988 63221 10 113468899999999988876
Q ss_pred -----CcEEEeeCCCCCccCcccceeee-ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCC
Q 000080 2293 -----GTVCTWQLEVGGRSNVRPMESCL-CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTL 2352 (2389)
Q Consensus 2293 -----gTVkLWDl~tggrs~~k~l~tl~-gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l 2352 (2389)
..|.+|++.++. + .....+. .......+++++| ||+.|+..........|.++|+.
T Consensus 242 ~~~~~~~v~~~~lgt~~-~--~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 242 ETLRENKVWRHVMGKLQ-S--EDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp TTCCEEEEEEEETTSCG-G--GCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESS
T ss_pred CCCCCCEEEEEECCCCc-h--hcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECC
Confidence 358888887752 1 1112222 2334566889999 99988865433345568888873
No 219
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.77 E-value=0.00075 Score=80.53 Aligned_cols=122 Identities=9% Similarity=-0.028 Sum_probs=65.7
Q ss_pred CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCccc
Q 000080 2231 RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRP 2310 (2389)
Q Consensus 2231 G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~ 2310 (2389)
+..|++|+.|++|+.||..+|+.+.++. . + . .+.++|+|+.+.+++.|++|+.||.++|. .
T Consensus 92 ~~~v~~g~~dg~v~a~D~~tG~~~w~~~---~-------~-~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~-----~ 152 (369)
T 2hz6_A 92 DGILYMGKKQDIWYVIDLLTGEKQQTLS---S-------A-F---ADSLSPSTSLLYLGRTEYTITMYDTKTRE-----L 152 (369)
T ss_dssp ---CCCCEEEEEEEEECCC------------------------------------EEEEEEEEEEECCCSSSSS-----C
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEec---C-------C-C---cccccccCCEEEEEecCCEEEEEECCCCC-----E
Confidence 4567788999999999999999887763 1 1 1 24678899999999999999999999973 2
Q ss_pred ceeeeecCCCeeEEEEecC---CCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccch
Q 000080 2311 MESCLCFSSHAMDVSYITS---SGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLN 2379 (2389)
Q Consensus 2311 l~tl~gHs~~V~sVAFSP~---DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~ 2379 (2389)
..+...+. ....++.++ ++.+++ + +.|+.|..||. .+++.+.++.-...-+...+.+++|.
T Consensus 153 ~W~~~~~~--~~~~~~~~~~~~~~~v~~-~---~~dg~v~a~d~--~tG~~~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 153 RWNATYFD--YAASLPEDDVDYKMSHFV-S---NGDGLVVTVDS--ESGDVLWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp CCEEEEEE--ECCBCCCCCTTCCCCEEE-E---ETSCEEEEECT--TTCCEEEEEECSSCEEEEEECTTSSC
T ss_pred EEeEeccc--ccCccccCCccccceEEE-E---CCCCEEEEEEC--CCCcEEEEecCCCceEEEEEecCCce
Confidence 22222111 122333331 145554 3 47899999997 57777777764333334566666664
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.65 E-value=0.00026 Score=84.53 Aligned_cols=63 Identities=10% Similarity=0.027 Sum_probs=44.1
Q ss_pred CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCC
Q 000080 2230 LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGG 2304 (2389)
Q Consensus 2230 dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tgg 2304 (2389)
++..+++|+.|++|+.||..+|+.+.++.. +.+.+..+.++|+.+++++.||+|+.||.++|.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~------------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~ 70 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE------------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNE 70 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC------------CCSCCCC-----CCEEECTTTCCEEEC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC------------CCceecceEcCCCEEEEeCCCCEEEEEECCCCc
Confidence 577899999999999999999999888751 224455566889899999999999999998873
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.58 E-value=0.013 Score=70.58 Aligned_cols=113 Identities=11% Similarity=-0.043 Sum_probs=75.7
Q ss_pred EcCCCCeEEEEeC--CC---cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe----------C
Q 000080 2227 SHPLRPFFLVGSS--NT---HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA----------L 2291 (2389)
Q Consensus 2227 FsPdG~~LASGS~--Dg---TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS----------~ 2291 (2389)
..|+++++..... +. +|.++|..+++.+.++. .|. . ..++|||||+++..+. .
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~---------~g~-~--p~i~~spDg~~lyv~n~~~~~~~rg~~ 95 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVN---------GGF-L--PNPVAAHSGSEFALASTSFSRIAKGKR 95 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEec---------CCC-C--CCeEECCCCCEEEEEeccccccccCCC
Confidence 4467765444332 22 89999999999887763 122 2 2899999999998886 4
Q ss_pred CCcEEEeeCCCCCccCcccceeeeec-------CCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEE
Q 000080 2292 DGTVCTWQLEVGGRSNVRPMESCLCF-------SSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRAS 2361 (2389)
Q Consensus 2292 DgTVkLWDl~tggrs~~k~l~tl~gH-------s~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~s 2361 (2389)
|++|.++|+.+.. .+.+..-- ...-..++|+| ||++|..+.. ..+++|.++| . +++.+..
T Consensus 96 ~~~v~viD~~t~~-----~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~-~~~~~v~viD-~--t~~~~~~ 162 (373)
T 2mad_H 96 TDYVEVFDPVTFL-----PIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQF-AAGPAVGLVV-Q--GGSSDDQ 162 (373)
T ss_pred CCeEEEEECCCCc-----EEEEEECCCccccccCCCccceEECC-CCCEEEEEec-CCCCeEEEEE-C--CCCEEeE
Confidence 7899999998752 33322110 12345799999 9999887631 1257899999 4 4555555
No 222
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.49 E-value=0.02 Score=68.89 Aligned_cols=112 Identities=8% Similarity=-0.135 Sum_probs=70.7
Q ss_pred EEEEcCCCCeEEEEe----------CCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC--
Q 000080 2224 AFSSHPLRPFFLVGS----------SNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL-- 2291 (2389)
Q Consensus 2224 sVAFsPdG~~LASGS----------~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~-- 2291 (2389)
.++|||||+++..+. .|++|.+||..+.+.+.+... ++......| ..-..++|||||++|..+..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~-~~~~~~~~g--~~p~~~~~spDG~~l~v~n~~~ 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIEL-PDAPRFDVG--PYSWMNANTPNNADLLFFQFAA 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEEC-CCccccccC--CCccceEECCCCCEEEEEecCC
Confidence 569999999888775 378899999998888777642 200000001 22468999999999998874
Q ss_pred CCcEEEeeCCCCCccCccccee-eeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeC
Q 000080 2292 DGTVCTWQLEVGGRSNVRPMES-CLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDT 2351 (2389)
Q Consensus 2292 DgTVkLWDl~tggrs~~k~l~t-l~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~ 2351 (2389)
+++|.++| +++. ...+ .. ... ++.+.|...+.+++. +.|+++.++|.
T Consensus 147 ~~~v~viD-~t~~-----~~~~~i~-~~~---~~~~~~~~~~~~~~~---~~dg~~~~vd~ 194 (373)
T 2mad_H 147 GPAVGLVV-QGGS-----SDDQLLS-SPT---CYHIHPGAPSTFYLL---CAQGGLAKTDH 194 (373)
T ss_pred CCeEEEEE-CCCC-----EEeEEcC-CCc---eEEEEeCCCceEEEE---cCCCCEEEEEC
Confidence 58899999 8762 3333 22 111 244555222333332 35666666664
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.47 E-value=0.012 Score=76.24 Aligned_cols=127 Identities=14% Similarity=0.131 Sum_probs=87.7
Q ss_pred EEcCCC---CeEEEEeCCCcEEEeecCCCceeeEecccCCC----------------------C---CC-CCCCCCCEEE
Q 000080 2226 SSHPLR---PFFLVGSSNTHIYLWEFGKDKATATYGVLPAA----------------------N---VP-PPYALASISA 2276 (2389)
Q Consensus 2226 AFsPdG---~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh----------------------~---~p-~~GH~~~V~s 2276 (2389)
....+| +.|+.++.||.|+++|..+|+.+..+..-+.. . .| ..|...+ ..
T Consensus 319 ~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w-~~ 397 (677)
T 1kb0_A 319 DIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNW-HP 397 (677)
T ss_dssp EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCS-SC
T ss_pred ecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCC-CC
Confidence 444588 78999999999999999999987665311000 0 00 1122122 36
Q ss_pred EEECCCCCEEEEEeCC-------------------------------------------CcEEEeeCCCCCccCccccee
Q 000080 2277 LQFDHYGHRFASAALD-------------------------------------------GTVCTWQLEVGGRSNVRPMES 2313 (2389)
Q Consensus 2277 VaFSPDG~~LASgS~D-------------------------------------------gTVkLWDl~tggrs~~k~l~t 2313 (2389)
++|+|++.++.+.+.| |+|..||+++| +.+.+
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG-----~~~W~ 472 (677)
T 1kb0_A 398 MSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ-----KAAWS 472 (677)
T ss_dssp CEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT-----EEEEE
T ss_pred ceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC-----cEEee
Confidence 8999999888776542 78999999997 34444
Q ss_pred eeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEee
Q 000080 2314 CLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCH 2365 (2389)
Q Consensus 2314 l~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH 2365 (2389)
.. +...+.+..+++ +|.++..+ +.|+++++||. .+++.+.++.-.
T Consensus 473 ~~-~~~~~~~g~~~~-~g~~v~~g---~~dg~l~a~D~--~tG~~lw~~~~~ 517 (677)
T 1kb0_A 473 VE-HVSPWNGGTLTT-AGNVVFQG---TADGRLVAYHA--ATGEKLWEAPTG 517 (677)
T ss_dssp EE-ESSSCCCCEEEE-TTTEEEEE---CTTSEEEEEET--TTCCEEEEEECS
T ss_pred cC-CCCCCcCcceEe-CCCEEEEE---CCCCcEEEEEC--CCCceeeeeeCC
Confidence 43 334455666777 66777764 58999999997 578888888643
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.08 E-value=0.029 Score=69.61 Aligned_cols=114 Identities=11% Similarity=-0.039 Sum_probs=78.7
Q ss_pred CCCCeEEEE-eCC----CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe----------CCC
Q 000080 2229 PLRPFFLVG-SSN----THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA----------LDG 2293 (2389)
Q Consensus 2229 PdG~~LASG-S~D----gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS----------~Dg 2293 (2389)
|+++.+... ..+ ++|.+.|..+++.+.++.+ |. .. .|+|||||+++..+. .++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v---------G~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~~ 149 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG---------GF-LP--HPVAAEDGSFFAQASTVFERIARGKRTD 149 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE---------CS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC---------CC-CC--ceEECCCCCEEEEEeccccccccCCCCC
Confidence 566644433 333 7999999999999888752 22 23 799999999887776 478
Q ss_pred cEEEeeCCCCCccCcccceeee-e------cCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE
Q 000080 2294 TVCTWQLEVGGRSNVRPMESCL-C------FSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT 2363 (2389)
Q Consensus 2294 TVkLWDl~tggrs~~k~l~tl~-g------Hs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~ 2363 (2389)
+|.++|..++ +.+.++. + ....-..++|+| ||++|..+.. ..+++|-+-|+ .+.+.+..+.
T Consensus 150 ~VsviD~~t~-----~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~-~~~~~VsVID~--~t~kvv~~I~ 217 (426)
T 3c75_H 150 YVEVFDPVTF-----LPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQF-SPAPAVGVVDL--EGKTFDRMLD 217 (426)
T ss_dssp EEEEECTTTC-----CEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEEC-SSSCEEEEEET--TTTEEEEEEE
T ss_pred EEEEEECCCC-----cEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEec-CCCCeEEEEEC--CCCeEEEEEE
Confidence 9999999986 2344332 1 012345689999 8988877531 13688999998 4556566664
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.08 E-value=0.0089 Score=76.90 Aligned_cols=130 Identities=9% Similarity=0.016 Sum_probs=82.4
Q ss_pred CcEEEeecCC--Cce-eeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEE-EeCCCcEEEeeCCCCCc---cCc----c
Q 000080 2241 THIYLWEFGK--DKA-TATYGVLPAANVPPPYALASISALQFDHYGHRFAS-AALDGTVCTWQLEVGGR---SNV----R 2309 (2389)
Q Consensus 2241 gTIRLWDl~t--Gk~-l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LAS-gS~DgTVkLWDl~tggr---s~~----k 2309 (2389)
+.|.+-|..+ ++. +.+..+ . .....|.|||||+++.. +-.+.+|.+.|+++... ..+ .
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipv---g--------~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~ 322 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPI---A--------NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSA 322 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEE---E--------SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGG
T ss_pred CcEEEEeCcccCCceeEEEEec---C--------CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccc
Confidence 3589999887 554 444421 1 23478999999985555 55889999999985300 000 0
Q ss_pred cceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCC--------CCCceEEEEeecCc-----EEEEeecc
Q 000080 2310 PMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAP--------PTSSRASITCHEGL-----YDLFLPLK 2376 (2389)
Q Consensus 2310 ~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~--------tg~~v~sL~GH~~~-----V~svA~~~ 2376 (2389)
...+.. -....+-++|+| ||....+. -.|++|..||+..+ ..+.++++.-|-.. ...++.++
T Consensus 323 v~~~v~-vG~gP~h~aF~~-dG~aY~t~---~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~ 397 (595)
T 1fwx_A 323 VVAEPE-LGLGPLHTAFDG-RGNAYTSL---FLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA 397 (595)
T ss_dssp EEECCB-CCSCEEEEEECT-TSEEEEEE---TTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC
T ss_pred eEEEcC-CCCCcceEEECC-CCeEEEEE---ecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC
Confidence 111211 124567899999 88444443 48899999997321 13457777665442 22446689
Q ss_pred cchhhhcccc
Q 000080 2377 LLNFALSKCR 2386 (2389)
Q Consensus 2377 ~~~~~~s~~~ 2386 (2389)
+|+|+++-||
T Consensus 398 DGk~l~~~Nk 407 (595)
T 1fwx_A 398 TNDWLVCLSK 407 (595)
T ss_dssp CSSEEEEEES
T ss_pred CCCEEEEcCC
Confidence 9999998886
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.06 E-value=0.015 Score=70.68 Aligned_cols=100 Identities=10% Similarity=-0.092 Sum_probs=72.0
Q ss_pred eEEEEeCCC----cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe----------CCCcEEEe
Q 000080 2233 FFLVGSSNT----HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA----------LDGTVCTW 2298 (2389)
Q Consensus 2233 ~LASGS~Dg----TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS----------~DgTVkLW 2298 (2389)
.+++-..++ +|.+.|..+++.+.++.+ |. .. .++|||||+++..+. .|++|.+|
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~v---------G~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~Vsvi 101 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLG---------AF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVF 101 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEE---------CT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeC---------CC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 455555454 899999999999988752 23 23 699999999888886 47999999
Q ss_pred eCCCCCccCcccceeeeec-------CCCeeEEEEecCCCCEEEEeecCCCCCeEEE--eeC
Q 000080 2299 QLEVGGRSNVRPMESCLCF-------SSHAMDVSYITSSGSVIAAAGHSSNGINVVV--WDT 2351 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gH-------s~~V~sVAFSP~DGslLASAG~sS~D~TVrL--WD~ 2351 (2389)
|+.++ +.+.++.-. ......++|+| ||++|..+-. ..+++|.+ +|+
T Consensus 102 D~~T~-----~vv~~I~v~~~~~~~~g~~P~~ia~Sp-DGk~lyVan~-~~~~~v~V~~iD~ 156 (368)
T 1mda_H 102 DPVTF-----LPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLF-GSSAAAGLSVPGA 156 (368)
T ss_dssp CTTTC-----CEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEEC-SSSCEEEEEETTT
T ss_pred ECCCC-----CEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEcc-CCCCeEEEEEEch
Confidence 99987 345555322 02245699999 8988887521 13567888 997
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.01 E-value=0.031 Score=72.64 Aligned_cols=167 Identities=10% Similarity=0.054 Sum_probs=100.1
Q ss_pred ccccccccccccccCCCC-----cCceeEEEEEEcCCCC---eEEEEeCCCcEEEeecCCCceeeEecccC---------
Q 000080 2199 LGWETQDDFEDYVDPPAT-----VENISTRAFSSHPLRP---FFLVGSSNTHIYLWEFGKDKATATYGVLP--------- 2261 (2389)
Q Consensus 2199 ~~~d~~~~~~~~~d~~at-----v~ni~VrsVAFsPdG~---~LASGS~DgTIRLWDl~tGk~l~Tl~vl~--------- 2261 (2389)
+.-++-+.+|.+...... ..+. ..-.....+|+ .++.++.||.++++|..+|+.+......+
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~-~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~ 358 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQH-MILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDM 358 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSC-EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEET
T ss_pred EEccCCceeEeeecCCcccccccCCCC-cEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCc
Confidence 455666777776421111 1111 11113334675 79999999999999999999874322100
Q ss_pred ----------------CCC----CC-CCCCCCCEEEEEECCCCCEEEEEeC-----------------------------
Q 000080 2262 ----------------AAN----VP-PPYALASISALQFDHYGHRFASAAL----------------------------- 2291 (2389)
Q Consensus 2262 ----------------gh~----~p-~~GH~~~V~sVaFSPDG~~LASgS~----------------------------- 2291 (2389)
... .| ..|...+ ..++|+|+.+.+.+.+.
T Consensus 359 ~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w-~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 437 (689)
T 1yiq_A 359 KTGRPILDEENAAYWKNGKRNLVTPAFWGAHDW-QPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTG 437 (689)
T ss_dssp TTTEEEECHHHHCTTTSSSCEEESSCTTCSSCS-SCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEEC
T ss_pred cCCCcccchhhccccCCCCeeEeCCCcccccCC-CcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccc
Confidence 000 00 0111111 24899999888877632
Q ss_pred ----------------CCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCC
Q 000080 2292 ----------------DGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPP 2355 (2389)
Q Consensus 2292 ----------------DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~t 2355 (2389)
+|+|+.||++|| +...+...+. .+..-.++. .|.++..+ +.|+.++.||. .+
T Consensus 438 ~~p~~~~~~~~~~~~~~g~l~A~D~~tG-----~~~W~~~~~~-~~~~g~~~t-agglvf~g---t~dg~l~a~D~--~t 505 (689)
T 1yiq_A 438 MMPEGAEGLLEMAKSWSGKLIAWDPVKQ-----QAAWEVPYVT-IFNGGTLST-AGNLVFEG---SADGRVIAYAA--DT 505 (689)
T ss_dssp CCCSSHHHHHHHHTTCEEEEEEEETTTT-----EEEEEEEESS-SCCCCEEEE-TTTEEEEE---CTTSEEEEEET--TT
T ss_pred ccCcccccCCCCCCCcceeEEEEECCCC-----CeEeEccCCC-CccCccceE-CCCEEEEE---CCCCcEEEEEC--CC
Confidence 488999999997 3455554443 334446777 67778775 68999999997 68
Q ss_pred CCceEEEEeecCcE-EEEeecccch
Q 000080 2356 TSSRASITCHEGLY-DLFLPLKLLN 2379 (2389)
Q Consensus 2356 g~~v~sL~GH~~~V-~svA~~~~~~ 2379 (2389)
++.+.+++...+.+ .-+.+..+|+
T Consensus 506 G~~lw~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 506 GEKLWEQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp CCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CccceeeeCCCCcccCceEEEECCE
Confidence 88888887543222 2344444554
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.92 E-value=0.029 Score=70.33 Aligned_cols=146 Identities=8% Similarity=0.004 Sum_probs=98.1
Q ss_pred EEEEEcCCCCeEEEEeCC------CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe------
Q 000080 2223 RAFSSHPLRPFFLVGSSN------THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA------ 2290 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~D------gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS------ 2290 (2389)
+.+...|+| +++|...| +.|-+.|..+++.+.++.. ..+ | ...-+.+.|+|+++.+.|..
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~-~~~--~----~~~~Yd~~~~p~~~~mvsS~wg~p~~ 212 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEI-DRG--D----QYLAYDFWWNLPNEVLVSSEWAVPNT 212 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCS-BCT--T----CCCCCCEEEETTTTEEEECBCCCHHH
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEcc-CCC--C----ccccceEEECCCCCEEEEccCcCccc
Confidence 667899999 88887777 7999999999999888752 111 1 12235688899999998885
Q ss_pred -------------CCCcEEEeeCCCCCccCcccceeeee--cCCCeeEEEE--ecCCCCEEEEeecCC-----CCCeEEE
Q 000080 2291 -------------LDGTVCTWQLEVGGRSNVRPMESCLC--FSSHAMDVSY--ITSSGSVIAAAGHSS-----NGINVVV 2348 (2389)
Q Consensus 2291 -------------~DgTVkLWDl~tggrs~~k~l~tl~g--Hs~~V~sVAF--SP~DGslLASAG~sS-----~D~TVrL 2348 (2389)
.+++|.+||+.++ +.+.++.- .......++| +| +|+++-.+. . .+++|.+
T Consensus 213 ~~~g~~~~~~~~~~~d~V~v~D~~~~-----k~~~tI~vg~~g~~P~~i~f~~~P-dg~~aYV~~--e~~~~~Lss~V~v 284 (462)
T 2ece_A 213 IEDGLKLEHLKDRYGNRIHFWDLRKR-----KRIHSLTLGEENRMALELRPLHDP-TKLMGFINM--VVSLKDLSSSIWL 284 (462)
T ss_dssp HTTCCCTTTHHHHSCCEEEEEETTTT-----EEEEEEESCTTEEEEEEEEECSST-TCCEEEEEE--EEETTTCCEEEEE
T ss_pred cccccchhhhhhccCCEEEEEECCCC-----cEeeEEecCCCCCccceeEeeECC-CCCEEEEEE--eeeccCCCceEEE
Confidence 3799999999975 23334332 1123445666 88 888777652 4 5678888
Q ss_pred eeCCCCCCCc--eEEE--Eee----------------cCcEEEEeecccchhhhcccc
Q 000080 2349 WDTLAPPTSS--RASI--TCH----------------EGLYDLFLPLKLLNFALSKCR 2386 (2389)
Q Consensus 2349 WD~l~~tg~~--v~sL--~GH----------------~~~V~svA~~~~~~~~~s~~~ 2386 (2389)
|... .++. ++.+ ... .+....++.+++|+|..--||
T Consensus 285 ~~~d--~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnr 340 (462)
T 2ece_A 285 WFYE--DGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLW 340 (462)
T ss_dssp EEEE--TTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEET
T ss_pred EEec--CCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeC
Confidence 7753 1221 1221 111 244678899999999876555
No 229
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.85 E-value=0.032 Score=68.59 Aligned_cols=76 Identities=13% Similarity=-0.057 Sum_probs=56.2
Q ss_pred EEEcCCCCeEEEEe----------CCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC--C
Q 000080 2225 FSSHPLRPFFLVGS----------SNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL--D 2292 (2389)
Q Consensus 2225 VAFsPdG~~LASGS----------~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~--D 2292 (2389)
++++|||+++..++ .+++|.+||..+++.+.++.+ ++....+ ....-+.++|+|||+++..+.. +
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v-~~g~r~~--~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIEL-PDAPRFL--VGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEE-TTCCCCC--BSCCGGGEEECTTSSEEEEEECSSS
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEEC-CCccccc--cCCCCceEEEcCCCCEEEEEEcCCC
Confidence 79999999876655 477899999999998888742 2100000 0123467999999998887763 7
Q ss_pred CcEEEeeCCCC
Q 000080 2293 GTVCTWQLEVG 2303 (2389)
Q Consensus 2293 gTVkLWDl~tg 2303 (2389)
++|.++|++++
T Consensus 160 ~~VsVID~~t~ 170 (386)
T 3sjl_D 160 PAVGVVDLEGK 170 (386)
T ss_dssp CEEEEEETTTT
T ss_pred CeEEEEECCCC
Confidence 99999999986
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.77 E-value=0.062 Score=67.45 Aligned_cols=145 Identities=14% Similarity=0.081 Sum_probs=93.8
Q ss_pred CCCCe-EEEEeCCCcEEEeecCCC----ceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC------CcEEE
Q 000080 2229 PLRPF-FLVGSSNTHIYLWEFGKD----KATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD------GTVCT 2297 (2389)
Q Consensus 2229 PdG~~-LASGS~DgTIRLWDl~tG----k~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D------gTVkL 2297 (2389)
+++++ +++|-.+.+|++.|+.+. +.+++.+. +.-....| ...=+.+.++||| .++++..| |+|-+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~--~~~~~~~g-~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEP--EEVKKVSG-YSRLHTVHCGPDA-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECH--HHHHHHHC-EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeech--hhcccccC-CCcccceeECCCe-EEEEcCCCcCCCCCCeEEE
Confidence 78885 556778899999999755 55565520 00000001 1234678999999 88888877 89999
Q ss_pred eeCCCCCccCcccceeee---ecCCCeeEEEEecCCCCEEEEeecC----------------CCCCeEEEeeCCCCCCCc
Q 000080 2298 WQLEVGGRSNVRPMESCL---CFSSHAMDVSYITSSGSVIAAAGHS----------------SNGINVVVWDTLAPPTSS 2358 (2389)
Q Consensus 2298 WDl~tggrs~~k~l~tl~---gHs~~V~sVAFSP~DGslLASAG~s----------------S~D~TVrLWD~l~~tg~~ 2358 (2389)
.|.+++ +.+.++. +-....+++.|+| +++++.|+-++ ..+.+|.+||+ .+++.
T Consensus 169 lD~~T~-----~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~--~~~k~ 240 (462)
T 2ece_A 169 LDHYSF-----EPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL--RKRKR 240 (462)
T ss_dssp ECTTTC-----CEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET--TTTEE
T ss_pred EECCCC-----eEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEEC--CCCcE
Confidence 999986 2344443 1224456788999 89999885211 12789999998 34556
Q ss_pred eEEEEeec--CcEEE--Eeecccchhhhccc
Q 000080 2359 RASITCHE--GLYDL--FLPLKLLNFALSKC 2385 (2389)
Q Consensus 2359 v~sL~GH~--~~V~s--vA~~~~~~~~~s~~ 2385 (2389)
++++.--. ..... ++++|+|++|.--|
T Consensus 241 ~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~ 271 (462)
T 2ece_A 241 IHSLTLGEENRMALELRPLHDPTKLMGFINM 271 (462)
T ss_dssp EEEEESCTTEEEEEEEEECSSTTCCEEEEEE
T ss_pred eeEEecCCCCCccceeEeeECCCCCEEEEEE
Confidence 77776421 12333 45599998875443
No 231
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.29 E-value=0.27 Score=56.74 Aligned_cols=143 Identities=10% Similarity=0.017 Sum_probs=84.2
Q ss_pred EEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecc-cCCCCCCCCCCCCCEEEEEECC-CCCEEEEEeC--------
Q 000080 2223 RAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGV-LPAANVPPPYALASISALQFDH-YGHRFASAAL-------- 2291 (2389)
Q Consensus 2223 rsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~v-l~gh~~p~~GH~~~V~sVaFSP-DG~~LASgS~-------- 2291 (2389)
..|++.| +|+++++... +.|..+|..+++ +.++.. .++ ........|++.| +|+..++-..
T Consensus 83 ~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g~-~~~~~~~~~~------~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCY-YHLSVVGSEGGH-ATQLATSVDG------VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp EEEEEETTTTEEEEEETT-TEEEEECTTCEE-CEEEESEETT------EECSCEEEEEECTTTCCEEEEESCSSCCTTCH
T ss_pred ceEEEcCCCCcEEEEECC-CCEEEEeCCCCE-EEEecccCCC------CcccccceEEEecCCCEEEEECCccccccccc
Confidence 6789998 7776665443 448888976554 333321 011 1124578999999 9998887543
Q ss_pred ---------CCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE
Q 000080 2292 ---------DGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI 2362 (2389)
Q Consensus 2292 ---------DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL 2362 (2389)
++.|..+|..++. +..+..--...+.++++| ||+.|..+- +.++.|..+|+..........+
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~------~~~~~~~~~~p~gia~~~-dg~~lyv~d--~~~~~I~~~~~~~~~~~~~~~~ 225 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKE------TTLLLKELHVPGGAEVSA-DSSFVLVAE--FLSHQIVKYWLEGPKKGTAEVL 225 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTE------EEEEEEEESCCCEEEECT-TSSEEEEEE--GGGTEEEEEESSSTTTTCEEEE
T ss_pred ceehcccCCCceEEEEeCCCCE------EEEeccCCccCcceEECC-CCCEEEEEe--CCCCeEEEEECCCCcCCccceE
Confidence 4678888887641 111111123456799999 888554332 3567899998731111122233
Q ss_pred EeecCcEEEEeecccchhhhc
Q 000080 2363 TCHEGLYDLFLPLKLLNFALS 2383 (2389)
Q Consensus 2363 ~GH~~~V~svA~~~~~~~~~s 2383 (2389)
....+ -..++..++|+.-++
T Consensus 226 ~~~~g-P~gi~~d~~G~l~va 245 (322)
T 2fp8_A 226 VKIPN-PGNIKRNADGHFWVS 245 (322)
T ss_dssp EECSS-EEEEEECTTSCEEEE
T ss_pred EeCCC-CCCeEECCCCCEEEE
Confidence 22223 566788888875444
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.85 E-value=0.28 Score=57.56 Aligned_cols=119 Identities=7% Similarity=-0.032 Sum_probs=76.0
Q ss_pred EEEEEEcCCCCeEEEEeC--CCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2222 TRAFSSHPLRPFFLVGSS--NTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~--DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
...++|+|||.++++.+. +++|+..|..+|+.++++. ++.+ .....+++. +++..++.-.+++|.++|
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~~~--------~fgeGi~~~-g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK-MDDS--------YFGEGLTLL-NEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE-CCTT--------CCEEEEEEE-TTEEEEEETTCSEEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe-cCCC--------cceEEEEEe-CCEEEEEEecCCEEEEEE
Confidence 367799999887777664 6899999999999888864 2222 223445554 234555566789999999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT 2363 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~ 2363 (2389)
.++. +.+.++.--... ...+++ ||+.|..+ ..+++|.+.|+ .+.+.+.++.
T Consensus 93 ~~t~-----~v~~~i~~g~~~--g~glt~-Dg~~l~vs---~gs~~l~viD~--~t~~v~~~I~ 143 (266)
T 2iwa_A 93 RRTL-----SNIKNFTHQMKD--GWGLAT-DGKILYGS---DGTSILYEIDP--HTFKLIKKHN 143 (266)
T ss_dssp TTTT-----EEEEEEECCSSS--CCEEEE-CSSSEEEE---CSSSEEEEECT--TTCCEEEEEE
T ss_pred CCCC-----cEEEEEECCCCC--eEEEEE-CCCEEEEE---CCCCeEEEEEC--CCCcEEEEEE
Confidence 9986 344444211122 234666 55555443 24679999997 4555555554
No 233
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.83 E-value=0.28 Score=64.25 Aligned_cols=100 Identities=10% Similarity=0.060 Sum_probs=62.6
Q ss_pred EEEEcCCCCeEEEEeCC-----CcEEEeecCCCce--eeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC---CC
Q 000080 2224 AFSSHPLRPFFLVGSSN-----THIYLWEFGKDKA--TATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL---DG 2293 (2389)
Q Consensus 2224 sVAFsPdG~~LASGS~D-----gTIRLWDl~tGk~--l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~---Dg 2293 (2389)
+++|+|||+.|+-.+.| ..|+++++++++. +..+.. . +......+.+||||++|+..+. ..
T Consensus 225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~--~-------~~~~~~~~~~SpDg~~l~~~~~~~~~~ 295 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEE--H-------NPLFSAFMYKAADTNTLCIGSQSPETA 295 (751)
T ss_dssp CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEEC--C-------CTTCEEEEEECTTSSEEEEEEECSSCE
T ss_pred eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEec--C-------CCceEEEEEECCCCCEEEEEecCCCCc
Confidence 46899999988877766 4799999988753 233431 1 1245778999999999987763 34
Q ss_pred cEEEeeCCCCCccCccc-ceee-eecCCCeeEEEEecCCCCEEEE
Q 000080 2294 TVCTWQLEVGGRSNVRP-MESC-LCFSSHAMDVSYITSSGSVIAA 2336 (2389)
Q Consensus 2294 TVkLWDl~tggrs~~k~-l~tl-~gHs~~V~sVAFSP~DGslLAS 2336 (2389)
.|.++|+.++. . .+ +..+ .+.....+++.|+. ++.++..
T Consensus 296 ~l~~~d~~~~~-~--~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~ 336 (751)
T 2xe4_A 296 EVHLLDLRKGN-A--HNTLEIVRPREKGVRYDVQMHG-TSHLVIL 336 (751)
T ss_dssp EEEEEESSSCT-T--CCCEEESSCCCTTCCEEEEEET-TTEEEEE
T ss_pred eEEEEECCCCC-C--CceeEEeecCCCCceEEEeeee-CCEEEEE
Confidence 57788988751 0 11 0222 23344555665554 3344444
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.77 E-value=1.2 Score=49.96 Aligned_cols=141 Identities=10% Similarity=0.003 Sum_probs=86.2
Q ss_pred EEEEEEcCCC-CeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCC-CEEEEEeCCCcEEEee
Q 000080 2222 TRAFSSHPLR-PFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYG-HRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2222 VrsVAFsPdG-~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG-~~LASgS~DgTVkLWD 2299 (2389)
...++++|++ .++++-..++.|..+|...+.. .++. +. .......|+|+|++ +.+.+-...++|...+
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~--~~-------~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~ 107 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTII--RQ-------DLGSPEGIALDHLGRTIFWTDSQLDRIEVAK 107 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEE--CT-------TCCCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEEE--EC-------CCCCccEEEEEecCCeEEEEECCCCEEEEEE
Confidence 4788999965 4666666788999999864443 3331 11 12457999999975 5555666778999999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE-eecCcEEEEeecccc
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT-CHEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~-GH~~~V~svA~~~~~ 2378 (2389)
+.... .+.+ ........+++++.|++|.+.++. .....+.|...++ .++..+.+. ..-..-..++.++++
T Consensus 108 ~~g~~---~~~~--~~~~~~~P~~i~vd~~~g~lyv~~-~~~~~~~I~~~~~---dg~~~~~~~~~~~~~P~gia~d~~~ 178 (267)
T 1npe_A 108 MDGTQ---RRVL--FDTGLVNPRGIVTDPVRGNLYWTD-WNRDNPKIETSHM---DGTNRRILAQDNLGLPNGLTFDAFS 178 (267)
T ss_dssp TTSCS---CEEE--ECSSCSSEEEEEEETTTTEEEEEE-CCSSSCEEEEEET---TSCCCEEEECTTCSCEEEEEEETTT
T ss_pred cCCCC---EEEE--EECCCCCccEEEEeeCCCEEEEEE-CCCCCcEEEEEec---CCCCcEEEEECCCCCCcEEEEcCCC
Confidence 87421 1111 111124568999999445555553 1112467888886 234444442 222446688888877
Q ss_pred hhh
Q 000080 2379 NFA 2381 (2389)
Q Consensus 2379 ~~~ 2381 (2389)
+++
T Consensus 179 ~~l 181 (267)
T 1npe_A 179 SQL 181 (267)
T ss_dssp TEE
T ss_pred CEE
Confidence 643
No 235
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.19 E-value=0.16 Score=63.11 Aligned_cols=126 Identities=10% Similarity=0.044 Sum_probs=81.7
Q ss_pred EEEcCCCCeEEEEeCCCcEEEeecCCCcee--eEecccCCCCCCCCC-CCCCEEEEEECCCCCEEEEEeC----------
Q 000080 2225 FSSHPLRPFFLVGSSNTHIYLWEFGKDKAT--ATYGVLPAANVPPPY-ALASISALQFDHYGHRFASAAL---------- 2291 (2389)
Q Consensus 2225 VAFsPdG~~LASGS~DgTIRLWDl~tGk~l--~Tl~vl~gh~~p~~G-H~~~V~sVaFSPDG~~LASgS~---------- 2291 (2389)
++|.|+|..++-.+.+++|.+.|...+... .++........+ .| .-.....++|+|||+++-.+..
T Consensus 270 ~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~-~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~ 348 (426)
T 3c75_H 270 PAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA-DDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAA 348 (426)
T ss_dssp CEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG-GTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSC
T ss_pred eeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc-cccccCCceeeEEcCCCCEEEEEecccccccccCC
Confidence 378999997777778899999998655421 222110000000 00 0011224689999987666542
Q ss_pred CCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCC-EEEEeecCCCCCeEEEeeCCCCCCCceEEE
Q 000080 2292 DGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGS-VIAAAGHSSNGINVVVWDTLAPPTSSRASI 2362 (2389)
Q Consensus 2292 DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGs-lLASAG~sS~D~TVrLWD~l~~tg~~v~sL 2362 (2389)
+++|.+.|+.+. +.+.++.-- ...+.++|+| ||+ ++.++- ..+++|-++|+ .+.+.++++
T Consensus 349 s~~VsVID~~T~-----kvv~~I~vg-~~P~gia~sp-Dg~~~lyv~n--~~s~~VsVID~--~t~kvv~tI 409 (426)
T 3c75_H 349 SRFVVVLNAETG-----ERINKIELG-HEIDSINVSQ-DAEPLLYALS--AGTQTLHIYDA--ATGEELRSV 409 (426)
T ss_dssp EEEEEEEETTTC-----CEEEEEEEE-EEECEEEECC-SSSCEEEEEE--TTTTEEEEEET--TTCCEEEEE
T ss_pred CCEEEEEECCCC-----eEEEEEECC-CCcCeEEEcc-CCCEEEEEEc--CCCCeEEEEEC--CCCCEEEEe
Confidence 468999999986 344444321 2477899999 898 887763 35899999998 577778886
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.07 E-value=0.31 Score=57.25 Aligned_cols=115 Identities=11% Similarity=0.096 Sum_probs=73.3
Q ss_pred EEEEEEcCCCCeEEEEeCCC--cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEE-EeCCCcEEEe
Q 000080 2222 TRAFSSHPLRPFFLVGSSNT--HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFAS-AALDGTVCTW 2298 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~Dg--TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LAS-gS~DgTVkLW 2298 (2389)
+..+.|+ ++.++.|++.+| +|+..|+.+|+.+++.. ++. ........++|++|-. .-.++++.++
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~~----------~~FgeGit~~g~~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIE-LGK----------RYFGEGISDWKDKIVGLTWKNGLGFVW 112 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEE-CCT----------TCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEe-cCC----------ccceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 4777999 788899998877 99999999999888774 221 1233333345555544 4458999999
Q ss_pred eCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE
Q 000080 2299 QLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI 2362 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL 2362 (2389)
|.++. +.+.++.- ...-+. +.+ ||+.|..+ ..+++|.++|+ .+.+.+.++
T Consensus 113 D~~t~-----~~~~ti~~-~~eG~g--lt~-dg~~L~~S---dGs~~i~~iDp--~T~~v~~~I 162 (262)
T 3nol_A 113 NIRNL-----RQVRSFNY-DGEGWG--LTH-NDQYLIMS---DGTPVLRFLDP--ESLTPVRTI 162 (262)
T ss_dssp ETTTC-----CEEEEEEC-SSCCCC--EEE-CSSCEEEC---CSSSEEEEECT--TTCSEEEEE
T ss_pred ECccC-----cEEEEEEC-CCCceE--Eec-CCCEEEEE---CCCCeEEEEcC--CCCeEEEEE
Confidence 99986 24444432 222233 445 45555442 23567999997 344555554
No 237
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=93.81 E-value=0.095 Score=68.04 Aligned_cols=79 Identities=13% Similarity=0.187 Sum_probs=57.3
Q ss_pred CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeee-ecCC
Q 000080 2241 THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCL-CFSS 2319 (2389)
Q Consensus 2241 gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~-gHs~ 2319 (2389)
++|+.||..+|+.+-.+.. ...+....++++|.++..++.||+++.||.++|. .+.++. ++..
T Consensus 457 g~l~A~D~~tG~~~W~~~~-----------~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~-----~lw~~~~~~~~ 520 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH-----------VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE-----KLWEAPTGTGV 520 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE-----------SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC-----EEEEEECSSCC
T ss_pred cEEEEEeCCCCcEEeecCC-----------CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc-----eeeeeeCCCCc
Confidence 8899999999998877641 1224455678889899999999999999999983 444443 3444
Q ss_pred CeeEEEEecCCCCEEEE
Q 000080 2320 HAMDVSYITSSGSVIAA 2336 (2389)
Q Consensus 2320 ~V~sVAFSP~DGslLAS 2336 (2389)
...-+.|.+ +|+.++.
T Consensus 521 ~~~p~~y~~-~G~~~v~ 536 (677)
T 1kb0_A 521 VAAPSTYMV-DGRQYVS 536 (677)
T ss_dssp CSCCEEEEE-TTEEEEE
T ss_pred ccCCEEEEe-CCEEEEE
Confidence 445678887 7765443
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=93.80 E-value=0.45 Score=53.74 Aligned_cols=113 Identities=9% Similarity=0.030 Sum_probs=75.9
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCC
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEV 2302 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~t 2302 (2389)
.++...++|.+++ |+.|+.|..+|.. |+.+..+.. +...+.++.+.++|+.++++ +.|..+| .+
T Consensus 140 ~~~~~~~~g~l~v-gt~~~~l~~~d~~-g~~~~~~~~----------~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~ 203 (330)
T 3hxj_A 140 ATPIVSEDGTIYV-GSNDNYLYAINPD-GTEKWRFKT----------NDAITSAASIGKDGTIYFGS---DKVYAIN-PD 203 (330)
T ss_dssp SCCEECTTSCEEE-ECTTSEEEEECTT-SCEEEEEEC----------SSCCCSCCEECTTCCEEEES---SSEEEEC-TT
T ss_pred eeeEEcCCCEEEE-EcCCCEEEEECCC-CCEeEEEec----------CCCceeeeEEcCCCEEEEEe---CEEEEEC-CC
Confidence 3446777887555 6788999999987 887766641 12457778888999877655 8899999 65
Q ss_pred CCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEe
Q 000080 2303 GGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITC 2364 (2389)
Q Consensus 2303 ggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~G 2364 (2389)
+. ...........+.+++..+ +|.+.+.+ .++.|..+|. +++.+..+..
T Consensus 204 g~-----~~~~~~~~~~~~~~~~~~~-~g~l~v~t----~~~gl~~~~~---~g~~~~~~~~ 252 (330)
T 3hxj_A 204 GT-----EKWNFYAGYWTVTRPAISE-DGTIYVTS----LDGHLYAINP---DGTEKWRFKT 252 (330)
T ss_dssp SC-----EEEEECCSSCCCSCCEECT-TSCEEEEE----TTTEEEEECT---TSCEEEEEEC
T ss_pred Cc-----EEEEEccCCcceeceEECC-CCeEEEEc----CCCeEEEECC---CCCEeEEeeC
Confidence 52 3333333446677888888 78877753 5666777773 4555554443
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=93.69 E-value=0.1 Score=67.89 Aligned_cols=79 Identities=15% Similarity=0.195 Sum_probs=56.6
Q ss_pred CCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeee-cC
Q 000080 2240 NTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLC-FS 2318 (2389)
Q Consensus 2240 DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~g-Hs 2318 (2389)
+|+|+.||..+|+.+-.+.. + ..+..-.++..|..+..|+.||+++.||.++| +.+.++.. +.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~---~--------~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG-----~~lw~~~~~~~ 517 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPY---V--------TIFNGGTLSTAGNLVFEGSADGRVIAYAADTG-----EKLWEQPAASG 517 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEE---S--------SSCCCCEEEETTTEEEEECTTSEEEEEETTTC-----CEEEEEECSSC
T ss_pred ceeEEEEECCCCCeEeEccC---C--------CCccCccceECCCEEEEECCCCcEEEEECCCC-----ccceeeeCCCC
Confidence 58999999999998877641 1 11233467778889999999999999999998 34555443 33
Q ss_pred CCeeEEEEecCCCCEEE
Q 000080 2319 SHAMDVSYITSSGSVIA 2335 (2389)
Q Consensus 2319 ~~V~sVAFSP~DGslLA 2335 (2389)
....-++|.. ||+..+
T Consensus 518 ~~~~p~ty~~-~G~qyv 533 (689)
T 1yiq_A 518 VMAAPVTYSV-DGEQYV 533 (689)
T ss_dssp CCSCCEEEEE-TTEEEE
T ss_pred cccCceEEEE-CCEEEE
Confidence 3345588888 777444
No 240
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=93.54 E-value=0.17 Score=61.58 Aligned_cols=86 Identities=5% Similarity=-0.123 Sum_probs=60.3
Q ss_pred EEEcCCCCeEEEEeC---------CCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCC-EEEEEe-CCC
Q 000080 2225 FSSHPLRPFFLVGSS---------NTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGH-RFASAA-LDG 2293 (2389)
Q Consensus 2225 VAFsPdG~~LASGS~---------DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~-~LASgS-~Dg 2293 (2389)
++|+|||+.+..+.. +..+.++|+.+++.+.++.+ | ...+.|+|+|||+ .+++.. .++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v---------g--~~p~gi~~s~Dg~~l~va~~~~~~ 337 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN---------G--HDSDAIIAAQDGASDNYANSAGTE 337 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE---------E--EEECEEEECCSSSCEEEEEETTTT
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC---------C--CCcceEEECCCCCEEEEEccCCCC
Confidence 689999997665432 23456999999998887642 1 2479999999997 566666 599
Q ss_pred cEEEeeCCCCCccCcccceeeeecCCCeeEEEEe
Q 000080 2294 TVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYI 2327 (2389)
Q Consensus 2294 TVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFS 2327 (2389)
+|.++|++++ +.+.++.-.. ....+++.
T Consensus 338 ~VsVID~~t~-----kvv~~I~vg~-~P~~i~~~ 365 (368)
T 1mda_H 338 VLDIYDAASD-----QDQSSVELDK-GPESLSVQ 365 (368)
T ss_dssp EEEEEESSSC-----EEEEECCCCS-CCCEEECC
T ss_pred eEEEEECCCC-----cEEEEEECCC-CCCEEEee
Confidence 9999999986 3555554332 23345444
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.54 E-value=0.75 Score=54.29 Aligned_cols=116 Identities=9% Similarity=0.065 Sum_probs=76.6
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
+..+.|+ ++.++.|.+.+|.|+..|+.+|+.+++. +++. ..--.+++.. ++.+...-.++++.++|.+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~--------~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLGN--------IFAEGLASDG-ERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTT--------CCEEEEEECS-SCEEEEESSSCEEEEEETT
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCC--------cceeEEEEeC-CEEEEEEccCCEEEEEECC
Confidence 4677898 4788999999999999999999987776 3322 2223455542 3566666678999999999
Q ss_pred CCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE
Q 000080 2302 VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT 2363 (2389)
Q Consensus 2302 tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~ 2363 (2389)
+. +.+.++.- ...-+.++ + ||+.|..+ ..+++|.++|+ .+.+.+.+++
T Consensus 125 Tl-----~~~~ti~~-~~eGwGLt--~-Dg~~L~vS---dGs~~l~~iDp--~T~~v~~~I~ 172 (268)
T 3nok_A 125 PP-----QRERTTRY-SGEGWGLC--Y-WNGKLVRS---DGGTMLTFHEP--DGFALVGAVQ 172 (268)
T ss_dssp TT-----EEEEEEEC-SSCCCCEE--E-ETTEEEEE---CSSSEEEEECT--TTCCEEEEEE
T ss_pred cC-----cEEEEEeC-CCceeEEe--c-CCCEEEEE---CCCCEEEEEcC--CCCeEEEEEE
Confidence 86 34444432 23334455 4 45655553 23678999997 4555555543
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.53 E-value=0.97 Score=53.02 Aligned_cols=136 Identities=6% Similarity=-0.071 Sum_probs=93.6
Q ss_pred EEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCC
Q 000080 2225 FSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGG 2304 (2389)
Q Consensus 2225 VAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tgg 2304 (2389)
++++. ++++++.-.+++|.++|..+.+.+.++.. + + ++ + ..++|||+++..+..+++|.+.|.++..
T Consensus 71 i~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~i~~-g---~---~~-g----~glt~Dg~~l~vs~gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 71 LTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKNFTH-Q---M---KD-G----WGLATDGKILYGSDGTSILYEIDPHTFK 137 (266)
T ss_dssp EEEET-TEEEEEETTCSEEEEEETTTTEEEEEEEC-C---S---SS-C----CEEEECSSSEEEECSSSEEEEECTTTCC
T ss_pred EEEeC-CEEEEEEecCCEEEEEECCCCcEEEEEEC-C---C---CC-e----EEEEECCCEEEEECCCCeEEEEECCCCc
Confidence 45552 34556666889999999999999888741 1 0 11 2 3377899888888889999999998852
Q ss_pred ccCcccceeee-e----cCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeec-------------
Q 000080 2305 RSNVRPMESCL-C----FSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHE------------- 2366 (2389)
Q Consensus 2305 rs~~k~l~tl~-g----Hs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~------------- 2366 (2389)
...+.. + .-...+.+.|. +|++.|+. ..+++|.+=|+ .+++.+..+.-..
T Consensus 138 -----v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~---~~~~~V~vID~--~tg~V~~~I~~~g~~~~~~~~~~~~~ 205 (266)
T 2iwa_A 138 -----LIKKHNVKYNGHRVIRLNELEYI--NGEVWANI---WQTDCIARISA--KDGTLLGWILLPNLRKKLIDEGFRDI 205 (266)
T ss_dssp -----EEEEEECEETTEECCCEEEEEEE--TTEEEEEE---TTSSEEEEEET--TTCCEEEEEECHHHHHHHHHTTCTTC
T ss_pred -----EEEEEEECCCCcccccceeEEEE--CCEEEEec---CCCCeEEEEEC--CCCcEEEEEECCCccccccccccccc
Confidence 233322 1 11246788888 57777764 35678999997 5778888886320
Q ss_pred CcEEEEeecccchhhhccc
Q 000080 2367 GLYDLFLPLKLLNFALSKC 2385 (2389)
Q Consensus 2367 ~~V~svA~~~~~~~~~s~~ 2385 (2389)
.....+|++++|++++--+
T Consensus 206 ~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 206 DVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp CCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEEcCCCCEEEEEC
Confidence 3457999999998876443
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=93.48 E-value=1.1 Score=51.70 Aligned_cols=134 Identities=8% Similarity=0.033 Sum_probs=81.2
Q ss_pred EEEEEEcC-CCCeEEEEeC-----------------CCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCC
Q 000080 2222 TRAFSSHP-LRPFFLVGSS-----------------NTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYG 2283 (2389)
Q Consensus 2222 VrsVAFsP-dG~~LASGS~-----------------DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG 2283 (2389)
...|++.| +|.++++-.. ++.|..+|..+++.......+ ..-..|+|+|||
T Consensus 128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~-----------~~p~gia~~~dg 196 (322)
T 2fp8_A 128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKEL-----------HVPGGAEVSADS 196 (322)
T ss_dssp EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEE-----------SCCCEEEECTTS
T ss_pred cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCC-----------ccCcceEECCCC
Confidence 36789999 9998887543 477899998767643322111 223679999999
Q ss_pred CEE-EEEeCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecC-------CCCCeEEEeeCCCCC
Q 000080 2284 HRF-ASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHS-------SNGINVVVWDTLAPP 2355 (2389)
Q Consensus 2284 ~~L-ASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~s-------S~D~TVrLWD~l~~t 2355 (2389)
++| ++-+.++.|..+++.... ......+....+ ...+++.+ +|++.++.... +..+.|..+|. .
T Consensus 197 ~~lyv~d~~~~~I~~~~~~~~~---~~~~~~~~~~~g-P~gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~---~ 268 (322)
T 2fp8_A 197 SFVLVAEFLSHQIVKYWLEGPK---KGTAEVLVKIPN-PGNIKRNA-DGHFWVSSSEELDGNMHGRVDPKGIKFDE---F 268 (322)
T ss_dssp SEEEEEEGGGTEEEEEESSSTT---TTCEEEEEECSS-EEEEEECT-TSCEEEEEEEETTSSTTSCEEEEEEEECT---T
T ss_pred CEEEEEeCCCCeEEEEECCCCc---CCccceEEeCCC-CCCeEECC-CCCEEEEecCcccccccCCCccEEEEECC---C
Confidence 855 454667899999987531 011112111223 67899999 89988764210 01245666663 4
Q ss_pred CCceEEEEeec----CcEEEEee
Q 000080 2356 TSSRASITCHE----GLYDLFLP 2374 (2389)
Q Consensus 2356 g~~v~sL~GH~----~~V~svA~ 2374 (2389)
++.+..+.... ..+++++.
T Consensus 269 G~~~~~~~~~~g~~~~~~~~~~~ 291 (322)
T 2fp8_A 269 GNILEVIPLPPPFAGEHFEQIQE 291 (322)
T ss_dssp SCEEEEEECCTTTTTSCCCEEEE
T ss_pred CCEEEEEECCCCCccccceEEEE
Confidence 66566665442 23555554
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=93.33 E-value=0.12 Score=66.61 Aligned_cols=117 Identities=13% Similarity=0.086 Sum_probs=78.3
Q ss_pred EEEEEcCCCCe-EEEEeCCCcEEEeecCCCc------------eeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEE
Q 000080 2223 RAFSSHPLRPF-FLVGSSNTHIYLWEFGKDK------------ATATYGVLPAANVPPPYALASISALQFDHYGHRFASA 2289 (2389)
Q Consensus 2223 rsVAFsPdG~~-LASGS~DgTIRLWDl~tGk------------~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASg 2289 (2389)
..+.|+|||++ ++++-.+.+|.++|+.+.+ .+... +.| ..-+.++|+|||+...+.
T Consensus 280 hGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v---------~vG--~gP~h~aF~~dG~aY~t~ 348 (595)
T 1fwx_A 280 HGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP---------ELG--LGPLHTAFDGRGNAYTSL 348 (595)
T ss_dssp CCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC---------BCC--SCEEEEEECTTSEEEEEE
T ss_pred eEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc---------CCC--CCcceEEECCCCeEEEEE
Confidence 55799999996 5556689999999998543 12221 122 346999999999778889
Q ss_pred eCCCcEEEeeCCCCC-----ccCcccceeeee-----cCCCeeEEEEecCCCCEEEEeecCCCCCe----------EEEe
Q 000080 2290 ALDGTVCTWQLEVGG-----RSNVRPMESCLC-----FSSHAMDVSYITSSGSVIAAAGHSSNGIN----------VVVW 2349 (2389)
Q Consensus 2290 S~DgTVkLWDl~tgg-----rs~~k~l~tl~g-----Hs~~V~sVAFSP~DGslLASAG~sS~D~T----------VrLW 2349 (2389)
-.|++|..||++++. ....+.+.++.- |.....+++++| ||++|.++--.|.|+- -+|.
T Consensus 349 ~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~-DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~ 427 (595)
T 1fwx_A 349 FLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA-TNDWLVCLSKFSKDRFLNVGPLKPENDQLI 427 (595)
T ss_dssp TTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC-CSSEEEEEESCCTTSSCCCCSSCCEEEEEE
T ss_pred ecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC-CCCEEEEcCCCCccccccCCCCCCCcceEE
Confidence 999999999998620 000123344333 322223456788 9999987644455663 2888
Q ss_pred eC
Q 000080 2350 DT 2351 (2389)
Q Consensus 2350 D~ 2351 (2389)
|+
T Consensus 428 di 429 (595)
T 1fwx_A 428 DI 429 (595)
T ss_dssp EC
T ss_pred Ec
Confidence 97
No 245
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.47 E-value=0.38 Score=61.75 Aligned_cols=116 Identities=12% Similarity=0.079 Sum_probs=74.5
Q ss_pred EEEEcC-CCCeEEEEeCCC-----------cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe-
Q 000080 2224 AFSSHP-LRPFFLVGSSNT-----------HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA- 2290 (2389)
Q Consensus 2224 sVAFsP-dG~~LASGS~Dg-----------TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS- 2290 (2389)
++++.| +|++++.|+.+. .+.+||..+++-...- ..+. .+.....++++.+||+.++.|+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~-~~~~------~~~~~~~~~~~~~~g~lyv~GG~ 262 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT-VTVT------KHDMFCPGISMDGNGQIVVTGGN 262 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE-EEEC------SCCCSSCEEEECTTSCEEEECSS
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc-ccCC------CCCCccccccCCCCCCEEEeCCC
Confidence 557888 999999998654 6899999888632211 1111 1223456788999999999999
Q ss_pred CCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCC---CCCeEEEeeC
Q 000080 2291 LDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSS---NGINVVVWDT 2351 (2389)
Q Consensus 2291 ~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS---~D~TVrLWD~ 2351 (2389)
.++++.+||..+..= ..+..+. ....--+++..+ +|++++.||... .-+++.+||.
T Consensus 263 ~~~~v~~yd~~t~~W---~~~~~~~-~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 263 DAKKTSLYDSSSDSW---IPGPDMQ-VARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp STTCEEEEEGGGTEE---EECCCCS-SCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEET
T ss_pred CCCceEEecCcCCce---eECCCCC-ccccccceEEec-CCeEEEEeCcccCCcccccceEeCC
Confidence 456899999987410 1111111 111112466777 899999987211 1167999997
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=92.39 E-value=1 Score=50.75 Aligned_cols=130 Identities=7% Similarity=-0.025 Sum_probs=84.4
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCC
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEV 2302 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~t 2302 (2389)
.++.+.++|.+++.. +.|..+| .+|+.+..+.. ....+.++++.++|+..+ ++.++.|..+|. +
T Consensus 180 ~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~----------~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~-~ 243 (330)
T 3hxj_A 180 SAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYA----------GYWTVTRPAISEDGTIYV-TSLDGHLYAINP-D 243 (330)
T ss_dssp SCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECC----------SSCCCSCCEECTTSCEEE-EETTTEEEEECT-T
T ss_pred eeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEcc----------CCcceeceEECCCCeEEE-EcCCCeEEEECC-C
Confidence 445778888877654 7899999 78887666531 125588889999987655 555677777774 3
Q ss_pred CCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccchhh
Q 000080 2303 GGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLNFA 2381 (2389)
Q Consensus 2303 ggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~~~ 2381 (2389)
+ +.+.........+.++++.+ +|.+.+. +.++.|..+|. +++.+..+.-....+.++...++|+..
T Consensus 244 g-----~~~~~~~~~~~~~~~~~~~~-~g~l~v~----t~~ggl~~~d~---~g~~~~~~~~~~~~~~~~~~d~~g~l~ 309 (330)
T 3hxj_A 244 G-----TEKWRFKTGKRIESSPVIGN-TDTIYFG----SYDGHLYAINP---DGTEKWNFETGSWIIATPVIDENGTIY 309 (330)
T ss_dssp S-----CEEEEEECSSCCCSCCEECT-TSCEEEE----CTTCEEEEECT---TSCEEEEEECSSCCCSCCEECTTCCEE
T ss_pred C-----CEeEEeeCCCCccccceEcC-CCeEEEe----cCCCCEEEECC---CCcEEEEEEcCCccccceEEcCCCEEE
Confidence 3 23334433344445566666 7777664 46778888884 566666665555556677776666543
No 247
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=92.27 E-value=1.9 Score=52.93 Aligned_cols=138 Identities=12% Similarity=0.062 Sum_probs=80.8
Q ss_pred EEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC-CCc---EEE
Q 000080 2223 RAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL-DGT---VCT 2297 (2389)
Q Consensus 2223 rsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~-DgT---VkL 2297 (2389)
..|+++| ++..|..+...+.|+.+|..+++. .++. + ....-..|+|+|+|++|..+.. ++. .-+
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-~~~~--~--------~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~ 208 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-STVY--S--------GLSKVRTICWTHEADSMIITNDQNNNDRPNNY 208 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-EEEE--C--------CCSCEEEEEECTTSSEEEEEECCSCTTSEEEE
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-EEEe--c--------CCCCcceEEEeCCCCEEEEEeCCCCcccceEE
Confidence 5679998 344444434448999999866554 3432 1 1245799999999995554443 332 233
Q ss_pred eeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEee--cCcEEEEeec
Q 000080 2298 WQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCH--EGLYDLFLPL 2375 (2389)
Q Consensus 2298 WDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH--~~~V~svA~~ 2375 (2389)
|-...++ ......+.. -....++++.|.+|.++++- ..++.|..+|. .+..+..+... ...-+.++++
T Consensus 209 ~~~~~g~---~~~~~~l~~-~~~p~giavdp~~g~lyv~d---~~~~~V~~~~~---~~~~~~~~~~~~~~~~P~gia~~ 278 (430)
T 3tc9_A 209 ILTRESG---FKVITELTK-GQNCNGAETHPINGELYFNS---WNAGQVFRYDF---TTQETTPLFTIQDSGWEFHIQFH 278 (430)
T ss_dssp EEEGGGT---SCSEEEEEE-CSSCCCEEECTTTCCEEEEE---TTTTEEEEEET---TTTEEEEEEECSSSSCCEEEEEC
T ss_pred EEeCCCc---eeeeeeecc-CCCceEEEEeCCCCEEEEEE---CCCCEEEEEEC---CCCcEEEEEEcCCCCcceeEEEc
Confidence 3333331 111123332 24456799999778887763 35678888886 23333222211 1345689999
Q ss_pred ccchhh
Q 000080 2376 KLLNFA 2381 (2389)
Q Consensus 2376 ~~~~~~ 2381 (2389)
|+|+++
T Consensus 279 pdG~~l 284 (430)
T 3tc9_A 279 PSGNYA 284 (430)
T ss_dssp TTSSEE
T ss_pred CCCCEE
Confidence 999853
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=91.80 E-value=2.8 Score=46.87 Aligned_cols=137 Identities=11% Similarity=-0.000 Sum_probs=83.0
Q ss_pred EEEEEcCCCC-eEEEEeC--CCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCC-EEEEEeCCCcEEEe
Q 000080 2223 RAFSSHPLRP-FFLVGSS--NTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGH-RFASAALDGTVCTW 2298 (2389)
Q Consensus 2223 rsVAFsPdG~-~LASGS~--DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~-~LASgS~DgTVkLW 2298 (2389)
+.++++|++. ++++... .+.|+.+++. |+....+.. . ....-..++++|+|+ .+++-...++|...
T Consensus 125 ~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d-g~~~~~~~~--~-------~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWNRDNPKIETSHMD-GTNRRILAQ--D-------NLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EEEEEETTTTEEEEEECCSSSCEEEEEETT-SCCCEEEEC--T-------TCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cEEEEeeCCCEEEEEECCCCCcEEEEEecC-CCCcEEEEE--C-------CCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 7889999654 5555433 4789888874 554444320 1 124568999999875 45666677899999
Q ss_pred eCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeec-CcEEEEeeccc
Q 000080 2299 QLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHE-GLYDLFLPLKL 2377 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~-~~V~svA~~~~ 2377 (2389)
|+.... ......+ ......++.. +|.++++. ..++.|...|. .+++.++.+.-.. .....++..|+
T Consensus 195 ~~~g~~-----~~~~~~~-~~~P~gi~~d--~~~lyva~---~~~~~v~~~d~--~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 195 NPAQPG-----RRKVLEG-LQYPFAVTSY--GKNLYYTD---WKTNSVIAMDL--AISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp ETTEEE-----EEEEEEC-CCSEEEEEEE--TTEEEEEE---TTTTEEEEEET--TTTEEEEEECCSSCCCCCCEEEECS
T ss_pred ecCCCc-----eEEEecC-CCCceEEEEe--CCEEEEEE---CCCCeEEEEeC--CCCCceEEEccccccccceeeecCc
Confidence 997531 1111222 2334567654 45566553 35678999996 4566677774322 24567778887
Q ss_pred chhhh
Q 000080 2378 LNFAL 2382 (2389)
Q Consensus 2378 ~~~~~ 2382 (2389)
+...+
T Consensus 262 ~~~~~ 266 (267)
T 1npe_A 262 QCPQG 266 (267)
T ss_dssp CC---
T ss_pred cCCCC
Confidence 76543
No 249
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=91.76 E-value=2.6 Score=48.53 Aligned_cols=109 Identities=14% Similarity=0.104 Sum_probs=69.5
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCc--EEEeeC
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGT--VCTWQL 2300 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgT--VkLWDl 2300 (2389)
..++++|+|+++++-..++.|..||.. ++....+. . + .....|+|+|||+.+++....+. |..+|.
T Consensus 35 egia~~~~g~lyv~d~~~~~I~~~d~~-g~~~~~~~-~-------~---~~p~gia~~~dG~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHEVGEIVSITPD-GNQQIHAT-V-------E---GKVSGLAFTSNGDLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEEE-C-------S---SEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred ceEEECCCCCEEEEeCCCCeEEEECCC-CceEEEEe-C-------C---CCceeEEEcCCCcEEEEeccCCcceEEEEcC
Confidence 667999999998888889999999975 44443332 1 1 34889999999997776654434 555566
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeC
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDT 2351 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~ 2351 (2389)
.++. ...+.... .......++..+ ++..+++- +.++.|...|.
T Consensus 103 ~~g~---~~~~~~~~-~~~~~~g~~~~~-~~~~~v~d---~~~g~i~~~d~ 145 (306)
T 2p4o_A 103 SDGT---VETLLTLP-DAIFLNGITPLS-DTQYLTAD---SYRGAIWLIDV 145 (306)
T ss_dssp TTSC---EEEEEECT-TCSCEEEEEESS-SSEEEEEE---TTTTEEEEEET
T ss_pred CCCe---EEEEEeCC-CccccCcccccC-CCcEEEEE---CCCCeEEEEeC
Confidence 6652 12222221 123345666666 56666653 35677777775
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=90.35 E-value=4.3 Score=47.25 Aligned_cols=117 Identities=6% Similarity=0.006 Sum_probs=73.4
Q ss_pred EEEEEEcCCCCeEEEEeCCC--cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2222 TRAFSSHPLRPFFLVGSSNT--HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~Dg--TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
+-.+.|++ +.++.|.+.+| .|+..|+.+|+.+++.. ++++ ..--.+++. +++.+...-.++++.++|
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~-l~~~--------~fgeGi~~~-~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAE-VPPP--------YFGAGIVAW-RDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEE-CCTT--------CCEEEEEEE-TTEEEEEESSSSEEEEEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEe-CCCC--------cceeEEEEe-CCEEEEEEeeCCEEEEEE
Confidence 35668997 77888888764 99999999999888764 2222 112333443 235555566789999999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT 2363 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~ 2363 (2389)
.++. +.+.++. ....-+.++ ++.+++++|- .+++|.++|. .+.+.+.+++
T Consensus 92 ~~tl-----~~~~ti~-~~~~Gwglt--~dg~~L~vSd----gs~~l~~iDp--~t~~~~~~I~ 141 (243)
T 3mbr_X 92 LATL-----TPRARFR-YPGEGWALT--SDDSHLYMSD----GTAVIRKLDP--DTLQQVGSIK 141 (243)
T ss_dssp TTTT-----EEEEEEE-CSSCCCEEE--ECSSCEEEEC----SSSEEEEECT--TTCCEEEEEE
T ss_pred CCcC-----cEEEEEe-CCCCceEEe--eCCCEEEEEC----CCCeEEEEeC--CCCeEEEEEE
Confidence 9986 3444443 223334454 5234555553 3578999997 3444455543
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=90.33 E-value=1.5 Score=51.57 Aligned_cols=129 Identities=9% Similarity=0.049 Sum_probs=88.3
Q ss_pred CeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccc
Q 000080 2232 PFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPM 2311 (2389)
Q Consensus 2232 ~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l 2311 (2389)
++++..-.++++.++|..+.+.+.++.. +++ + ..+++||++|.....+++|.++|.++.. ..
T Consensus 98 ~ly~ltw~~~~v~v~D~~t~~~~~ti~~-~~e--------G----~glt~dg~~L~~SdGs~~i~~iDp~T~~-----v~ 159 (262)
T 3nol_A 98 KIVGLTWKNGLGFVWNIRNLRQVRSFNY-DGE--------G----WGLTHNDQYLIMSDGTPVLRFLDPESLT-----PV 159 (262)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEEC-SSC--------C----CCEEECSSCEEECCSSSEEEEECTTTCS-----EE
T ss_pred EEEEEEeeCCEEEEEECccCcEEEEEEC-CCC--------c----eEEecCCCEEEEECCCCeEEEEcCCCCe-----EE
Confidence 3444445799999999999999998852 111 2 2345789888888888999999999862 22
Q ss_pred eeee----ecC-CCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEee------------cCcEEEEee
Q 000080 2312 ESCL----CFS-SHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCH------------EGLYDLFLP 2374 (2389)
Q Consensus 2312 ~tl~----gHs-~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH------------~~~V~svA~ 2374 (2389)
.+.. +.. ..++.+.|. +|++.|.. -.+++|.+-|. .+++.+..+.-. .+--+.||+
T Consensus 160 ~~I~V~~~g~~~~~lNELe~~--~G~lyan~---w~~~~I~vIDp--~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~ 232 (262)
T 3nol_A 160 RTITVTAHGEELPELNELEWV--DGEIFANV---WQTNKIVRIDP--ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAW 232 (262)
T ss_dssp EEEECEETTEECCCEEEEEEE--TTEEEEEE---TTSSEEEEECT--TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEE
T ss_pred EEEEeccCCccccccceeEEE--CCEEEEEE---ccCCeEEEEEC--CCCcEEEEEECCcCccccccccCcCCceEEEEE
Confidence 2221 111 445677886 68888764 35778999997 577777777642 123478999
Q ss_pred cccchhhhccc
Q 000080 2375 LKLLNFALSKC 2385 (2389)
Q Consensus 2375 ~~~~~~~~s~~ 2385 (2389)
+|++++.+--|
T Consensus 233 dp~~~~lfVTG 243 (262)
T 3nol_A 233 DKEHHRLFVTG 243 (262)
T ss_dssp ETTTTEEEEEE
T ss_pred cCCCCEEEEEC
Confidence 99988765433
No 252
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=89.86 E-value=2.9 Score=51.50 Aligned_cols=137 Identities=9% Similarity=0.025 Sum_probs=79.6
Q ss_pred EEEEEcCC---CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC---CcEE
Q 000080 2223 RAFSSHPL---RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD---GTVC 2296 (2389)
Q Consensus 2223 rsVAFsPd---G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D---gTVk 2296 (2389)
..|+++|+ |.++++-.. +.|+.+|..+|+...... .......|+|+|+|+.+++-... ..-.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~-----------~~~~P~giavd~dG~lyVad~~~~~~~~gv 209 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTT-----------NIGQCADVNFTLNGDMVVVDDQSSDTNTGI 209 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECC-----------CCSCEEEEEECTTCCEEEEECCSCTTSEEE
T ss_pred ceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeec-----------CCCCccEEEECCCCCEEEEcCCCCcccceE
Confidence 56799995 666665444 899999997776543321 12458999999999966655422 1211
Q ss_pred EeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEee--cCcEEEEee
Q 000080 2297 TWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCH--EGLYDLFLP 2374 (2389)
Q Consensus 2297 LWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH--~~~V~svA~ 2374 (2389)
++-...++. .....+. .-....++++.|.+|.+.++- ..++.|+.+|. .++.....+... ...-..+|+
T Consensus 210 ~~~~~~~~~---~~~~~~~-~~~~P~giavd~~~G~lyv~d---~~~~~V~~~d~--~~g~~~~~~~~~~~~~~~~~ia~ 280 (433)
T 4hw6_A 210 YLFTRASGF---TERLSLC-NARGAKTCAVHPQNGKIYYTR---YHHAMISSYDP--ATGTLTEEEVMMDTKGSNFHIVW 280 (433)
T ss_dssp EEECGGGTT---CCEEEEE-ECSSBCCCEECTTTCCEEECB---TTCSEEEEECT--TTCCEEEEEEECSCCSSCEEEEE
T ss_pred EEEECCCCe---ecccccc-ccCCCCEEEEeCCCCeEEEEE---CCCCEEEEEEC--CCCeEEEEEeccCCCCCcccEEE
Confidence 221122210 1011222 234456789998678877652 46678888886 234432333221 122346999
Q ss_pred cccchh
Q 000080 2375 LKLLNF 2380 (2389)
Q Consensus 2375 ~~~~~~ 2380 (2389)
+|+|++
T Consensus 281 dpdG~~ 286 (433)
T 4hw6_A 281 HPTGDW 286 (433)
T ss_dssp CTTSSE
T ss_pred eCCCCE
Confidence 999984
No 253
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.38 E-value=3.2 Score=49.09 Aligned_cols=131 Identities=6% Similarity=-0.004 Sum_probs=89.5
Q ss_pred EEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCC
Q 000080 2225 FSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGG 2304 (2389)
Q Consensus 2225 VAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tgg 2304 (2389)
+++.. +++++..-.++.+.++|..+.+.+.++.. ++ + + + .+++||++|..+..+++|.++|.++..
T Consensus 101 it~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~-~~-------e-G--w--GLt~Dg~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 101 LASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRY-SG-------E-G--W--GLCYWNGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp EEECS-SCEEEEESSSCEEEEEETTTTEEEEEEEC-SS-------C-C--C--CEEEETTEEEEECSSSEEEEECTTTCC
T ss_pred EEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeC-CC-------c-e--e--EEecCCCEEEEECCCCEEEEEcCCCCe
Confidence 44543 34555556899999999999999999852 11 1 2 2 344789998888889999999999862
Q ss_pred ccCcccceeee--ecC---CCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEee------------c-
Q 000080 2305 RSNVRPMESCL--CFS---SHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCH------------E- 2366 (2389)
Q Consensus 2305 rs~~k~l~tl~--gHs---~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH------------~- 2366 (2389)
.+.+.. .+. ..++.+.|. +|++.|.. -.+++|.+=|. .+++.+..+.-. .
T Consensus 167 -----v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanv---w~s~~I~vIDp--~TG~V~~~Idl~~L~~~~~~~~~~~~ 234 (268)
T 3nok_A 167 -----LVGAVQVKLRGQPVELINELECA--NGVIYANI---WHSSDVLEIDP--ATGTVVGVIDASALTRAVAGQVTNPE 234 (268)
T ss_dssp -----EEEEEECEETTEECCCEEEEEEE--TTEEEEEE---TTCSEEEEECT--TTCBEEEEEECHHHHHHHTTTCCCTT
T ss_pred -----EEEEEEeCCCCcccccccccEEe--CCEEEEEE---CCCCeEEEEeC--CCCcEEEEEECCCCcccccccccCcC
Confidence 222221 122 245677777 68887764 35678888897 577777777643 1
Q ss_pred CcEEEEeecccchhh
Q 000080 2367 GLYDLFLPLKLLNFA 2381 (2389)
Q Consensus 2367 ~~V~svA~~~~~~~~ 2381 (2389)
+--+.||.+|++++.
T Consensus 235 ~vlNGIA~dp~~~rl 249 (268)
T 3nok_A 235 AVLNGIAVEPGSGRI 249 (268)
T ss_dssp CCEEEEEECTTTCCE
T ss_pred CceEEEEEcCCCCEE
Confidence 234689999987754
No 254
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.89 E-value=22 Score=41.62 Aligned_cols=148 Identities=9% Similarity=0.161 Sum_probs=82.5
Q ss_pred CeeEEEEcCCCCCCCcEEE-ecCCeEEEEeeCCCCCCCCccceeeEEecccceEEEEeecCCCCeEEEEecc-eEEee-c
Q 000080 96 PVTSISWSPETPSIGQLAA-ASENCIFVFAHDSASSKGSFCWSQNAILVQGTKVEAIEWTGSGDGIVAGGME-TVLWK-K 172 (2389)
Q Consensus 96 dVk~VaWSPd~~~~GeIaA-SyDntIRVw~~d~~~~kgd~~W~~~~tL~hssTV~sIAWSpdG~rLaSggdD-V~IW~-~ 172 (2389)
.+..+++.|+ +.+++ +.++.|..- .| .+.-.|.... ......+.+++++++|+.++.+.+. +.++. .
T Consensus 164 ~~~~~~~~~~----~~~~~~g~~G~~~~S-~d----~gG~tW~~~~-~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D 233 (327)
T 2xbg_A 164 VMRNLNRSPS----GEYVAVSSRGSFYST-WE----PGQTAWEPHN-RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPD 233 (327)
T ss_dssp CEEEEEECTT----SCEEEEETTSSEEEE-EC----TTCSSCEEEE-CCSSSCEEEEEECTTSCEEEEETTTEEEEEETT
T ss_pred ceEEEEEcCC----CcEEEEECCCcEEEE-eC----CCCCceeECC-CCCCCccceeEECCCCCEEEEeCCceEEEecCC
Confidence 5889999995 55554 444443222 12 1123687753 2345688999999999776655444 33442 2
Q ss_pred cCCcEEEEEEeec--cccceEEEEeecCCCc-eEeeecccccccCCCCCCCceeEEEeeCCCccceeec--ccCCCCeeE
Q 000080 173 KNTLWEIAWKFKE--NYPQNLVSATWSIEGP-SATAASMSQLDLLGPKEAGKCVFICCSDGKSEYIKLE--LCHPQPVSM 247 (2389)
Q Consensus 173 ~~s~Wecvwt~~~--~~~~~ivsvaWSpdG~-fATag~dikf~~~~~~~~~kpV~V~~~dg~~~~~~ve--~aH~qdVn~ 247 (2389)
....|+.+- .+ .....++++++.+++. +|.+. ... ++.- .|+........ ..++.+++.
T Consensus 234 ~G~tW~~~~--~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~------------i~~S-~DgG~tW~~~~~~~~~~~~~~~ 297 (327)
T 2xbg_A 234 NSENWGELL--SPLRRNSVGFLDLAYRTPNEVWLAGG-AGA------------LLCS-QDGGQTWQQDVDVKKVPSNFYK 297 (327)
T ss_dssp EEEEECCCB--CTTSSCCSCEEEEEESSSSCEEEEES-TTC------------EEEE-SSTTSSCEECGGGTTSSSCCCE
T ss_pred CCCeeEecc--CCcccCCcceEEEEecCCCEEEEEeC-CCe------------EEEe-CCCCcccEEcCccCCCCCCeEE
Confidence 234565431 11 1223578888999888 55433 221 2211 13222233333 235688999
Q ss_pred EEeccCCCCCCCCCCccccCceEEeeecCCeEEEEE
Q 000080 248 VQWRPSTRRHSPGDTKRSQRHVLLTCCLDGTVRLWC 283 (2389)
Q Consensus 248 V~W~Ps~~~~~~~Dgk~~~~nILAScSdDgTVRLW~ 283 (2389)
|.+.+ .+.++.++.||+|.-++
T Consensus 298 v~~~~--------------~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 298 ILFFS--------------PDQGFILGQKGILLRYV 319 (327)
T ss_dssp EEEEE--------------TTEEEEECSTTEEEEEC
T ss_pred EEEEC--------------CCceEEEcCCceEEEEc
Confidence 99975 12366777899765443
No 255
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=88.73 E-value=5.9 Score=48.86 Aligned_cols=125 Identities=6% Similarity=-0.039 Sum_probs=78.2
Q ss_pred EEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCC-EEEEEeCCCcEEEeeC
Q 000080 2223 RAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGH-RFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2223 rsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~-~LASgS~DgTVkLWDl 2300 (2389)
..++++| +|.++++-..++.|+.+|..+|+...++... + ....-..|+|+|+|+ .+++-...+.|+.++.
T Consensus 231 ~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~-------~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-D-------TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp CCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-S-------CCSSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred CEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-C-------CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 4469999 8888888778899999999878763333111 1 112335799999998 5666667789999876
Q ss_pred CCCCccCcccceeeeec---------------CCCeeEEEE---------ecCCCCEEEEeecCCCCCeEEEeeCCCCCC
Q 000080 2301 EVGGRSNVRPMESCLCF---------------SSHAMDVSY---------ITSSGSVIAAAGHSSNGINVVVWDTLAPPT 2356 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gH---------------s~~V~sVAF---------SP~DGslLASAG~sS~D~TVrLWD~l~~tg 2356 (2389)
..... .......+.+. -..-..++| .+ +|.+.++- +..+.|+..|. .+
T Consensus 303 d~~~~-~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~-~g~lyvaD---~~n~~I~~~~~---~G 374 (433)
T 4hw6_A 303 NRETG-KLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED-EYDFYFCD---RDSHTVRVLTP---EG 374 (433)
T ss_dssp CTTTC-CBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC-CEEEEEEE---TTTTEEEEECT---TS
T ss_pred CCCCc-ccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC-CCcEEEEE---CCCCEEEEECC---CC
Confidence 52110 00111222221 123567999 55 77877763 56788998883 34
Q ss_pred CceEEEEe
Q 000080 2357 SSRASITC 2364 (2389)
Q Consensus 2357 ~~v~sL~G 2364 (2389)
.+.++.|
T Consensus 375 -~v~t~~G 381 (433)
T 4hw6_A 375 -RVTTYAG 381 (433)
T ss_dssp -EEEEEEC
T ss_pred -CEEEEEe
Confidence 4555554
No 256
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.64 E-value=2.7 Score=50.35 Aligned_cols=107 Identities=10% Similarity=0.119 Sum_probs=63.8
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCC----CCEEEEEeC---C---
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHY----GHRFASAAL---D--- 2292 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD----G~~LASgS~---D--- 2292 (2389)
+.++|.|||+++++ ..++.|+++| .+|+ ..+..++-. ..-......|+|+|| |..+++-+. +
T Consensus 32 ~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~--~~~~~~~v~----~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 32 WSIAPLGGGRYLVT-ERPGRLVLIS-PSGK--KLVASFDVA----NVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp EEEEEEETTEEEEE-ETTTEEEEEC-SSCE--EEEEECCCC----CSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred eEEEEcCCCeEEEE-eCCCEEEEEe-CCCc--eEeecccee----ecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 78899999997776 4569999998 4665 222211100 001245899999998 666666543 3
Q ss_pred -CcEEEeeCCCCC-c-cCccccee-eee-cCCCeeEEEEecCCCCEEEEee
Q 000080 2293 -GTVCTWQLEVGG-R-SNVRPMES-CLC-FSSHAMDVSYITSSGSVIAAAG 2338 (2389)
Q Consensus 2293 -gTVkLWDl~tgg-r-s~~k~l~t-l~g-Hs~~V~sVAFSP~DGslLASAG 2338 (2389)
+.|..++...+. . ...+.+.. +.. .......++|.| ||.+.++.|
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G 153 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTG 153 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEEC
Confidence 567777765421 0 00112211 221 112346799999 999998865
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.50 E-value=2.7 Score=53.66 Aligned_cols=126 Identities=13% Similarity=0.024 Sum_probs=78.8
Q ss_pred EEcCCCC---eEEEEeCCCcEEEeecCCCceeeEecccCCCC----------CC--------------------CCCCCC
Q 000080 2226 SSHPLRP---FFLVGSSNTHIYLWEFGKDKATATYGVLPAAN----------VP--------------------PPYALA 2272 (2389)
Q Consensus 2226 AFsPdG~---~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~----------~p--------------------~~GH~~ 2272 (2389)
...++|+ .++.++.+|.++..|..+|+.+..+..-+..+ .| ..|..+
T Consensus 308 ~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~ 387 (571)
T 2ad6_A 308 DQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHN 387 (571)
T ss_dssp EEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSC
T ss_pred ecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccC
Confidence 3346884 67889999999999999999876654211000 00 001111
Q ss_pred CEEEEEECCCCCEEEEEe-------------------------------------CCCcEEEeeCCCCCccCcccceeee
Q 000080 2273 SISALQFDHYGHRFASAA-------------------------------------LDGTVCTWQLEVGGRSNVRPMESCL 2315 (2389)
Q Consensus 2273 ~V~sVaFSPDG~~LASgS-------------------------------------~DgTVkLWDl~tggrs~~k~l~tl~ 2315 (2389)
+ ..++|+|++.++...+ .+|.|..||+++|. ...+..
T Consensus 388 w-~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~-----~~W~~~ 461 (571)
T 2ad6_A 388 Q-GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK-----AKWTKW 461 (571)
T ss_dssp S-CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC-----EEEEEE
T ss_pred C-CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC-----EEEEec
Confidence 1 3578999987776653 35889999999873 333332
Q ss_pred ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEe
Q 000080 2316 CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITC 2364 (2389)
Q Consensus 2316 gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~G 2364 (2389)
+...+.+..+.. .|.++..+ +.|++|+.+|. .+++.+.++.-
T Consensus 462 -~~~~~~~~~~~t-~gg~v~~g---~~dg~l~a~D~--~tG~~lw~~~~ 503 (571)
T 2ad6_A 462 -EKFAAWGGTLYT-KGGLVWYA---TLDGYLKALDN--KDGKELWNFKM 503 (571)
T ss_dssp -ESSCCCSBCEEE-TTTEEEEE---CTTSEEEEEET--TTCCEEEEEEC
T ss_pred -CCCCccceeEEE-CCCEEEEE---cCCCeEEEEEC--CCCCEEEEEeC
Confidence 222333334444 34555554 58999999997 57888887763
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=87.96 E-value=2.1 Score=55.49 Aligned_cols=154 Identities=9% Similarity=0.031 Sum_probs=88.7
Q ss_pred eccccccccccccccCCCC-cCc---eeEEEEEEcCCCC---eEEEEeCCCcEEEeecCCCceeeEecccC---------
Q 000080 2198 ALGWETQDDFEDYVDPPAT-VEN---ISTRAFSSHPLRP---FFLVGSSNTHIYLWEFGKDKATATYGVLP--------- 2261 (2389)
Q Consensus 2198 g~~~d~~~~~~~~~d~~at-v~n---i~VrsVAFsPdG~---~LASGS~DgTIRLWDl~tGk~l~Tl~vl~--------- 2261 (2389)
.+.-++-+.+|.+...... .+. .+.....+..+|+ .++.++.||.++++|..+|+.+......+
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~ 353 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL 353 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccc
Confidence 3455677777776421111 000 0111123334775 79999999999999999999874332100
Q ss_pred --C-----CC----------CC--CCCCCCCEEEEEECCCCCEEEEE---------------------------------
Q 000080 2262 --A-----AN----------VP--PPYALASISALQFDHYGHRFASA--------------------------------- 2289 (2389)
Q Consensus 2262 --g-----h~----------~p--~~GH~~~V~sVaFSPDG~~LASg--------------------------------- 2289 (2389)
+ +. .| ..|| .+ ..++|+|+..++-..
T Consensus 354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~-~w-~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 431 (668)
T 1kv9_A 354 ATGRPVEAPGVRYEKEPIVMWPSPFGAH-NW-HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDV 431 (668)
T ss_dssp TTCCEEECTTTTCSSSCEEESSCTTCSS-CS-SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCC
T ss_pred ccCCccccccccccCCeeEECCCCcccc-CC-CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCC
Confidence 0 00 00 0011 00 137888886654431
Q ss_pred ---eCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEee
Q 000080 2290 ---ALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCH 2365 (2389)
Q Consensus 2290 ---S~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH 2365 (2389)
..+|+|.-||+++| +.......+ ......++.. .|.++..+ +.|+.|+.||. .+++.+..+.-.
T Consensus 432 p~~~~~g~l~A~D~~tG-----~~~W~~~~~-~~~~~~~~~t-~gg~vf~g---~~dg~l~a~d~--~tG~~l~~~~~~ 498 (668)
T 1kv9_A 432 PAAVVSGALLAWDPVKQ-----KAAWKVPYP-THWNGGTLST-AGNLVFQG---TAAGQMHAYSA--DKGEALWQFEAQ 498 (668)
T ss_dssp CGGGCEEEEEEEETTTT-----EEEEEEEES-SSCCCCEEEE-TTTEEEEE---CTTSEEEEEET--TTCCEEEEEECS
T ss_pred CCCCccceEEEEeCCCC-----cEEEEccCC-CCCcCceeEe-CCCEEEEE---CCcccchhhhh--hcChhheEecCC
Confidence 23588999999997 234343322 2333345555 56777764 58999999997 577777777543
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=87.87 E-value=4.2 Score=47.37 Aligned_cols=126 Identities=7% Similarity=0.022 Sum_probs=86.1
Q ss_pred CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCccc
Q 000080 2231 RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRP 2310 (2389)
Q Consensus 2231 G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~ 2310 (2389)
+++++..-.++++.++|..+.+.+.++.. + ++ + ..+.+||++|..+..+++|.++|.++.. .
T Consensus 75 ~~ly~ltw~~~~v~v~D~~tl~~~~ti~~-~-------~~-G----wglt~dg~~L~vSdgs~~l~~iDp~t~~-----~ 136 (243)
T 3mbr_X 75 DRLIQLTWRNHEGFVYDLATLTPRARFRY-P-------GE-G----WALTSDDSHLYMSDGTAVIRKLDPDTLQ-----Q 136 (243)
T ss_dssp TEEEEEESSSSEEEEEETTTTEEEEEEEC-S-------SC-C----CEEEECSSCEEEECSSSEEEEECTTTCC-----E
T ss_pred CEEEEEEeeCCEEEEEECCcCcEEEEEeC-C-------CC-c----eEEeeCCCEEEEECCCCeEEEEeCCCCe-----E
Confidence 44555556899999999999999998851 1 11 2 2345788888888889999999999862 2
Q ss_pred ceeeee--cC---CCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEee------------c-CcEEEE
Q 000080 2311 MESCLC--FS---SHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCH------------E-GLYDLF 2372 (2389)
Q Consensus 2311 l~tl~g--Hs---~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH------------~-~~V~sv 2372 (2389)
+.+..- +. ..++.+.+. +|++.|.. -.+..|.+-|. .+++.+..+.-. . +--+.|
T Consensus 137 ~~~I~V~~~g~~~~~lNeLe~~--~G~lyanv---w~s~~I~vIDp--~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGI 209 (243)
T 3mbr_X 137 VGSIKVTAGGRPLDNLNELEWV--NGELLANV---WLTSRIARIDP--ASGKVVAWIDLQALVPDADALTDSTNDVLNGI 209 (243)
T ss_dssp EEEEECEETTEECCCEEEEEEE--TTEEEEEE---TTTTEEEEECT--TTCBEEEEEECGGGSTTTTSCCCTTSSCEEEE
T ss_pred EEEEEEccCCcccccceeeEEe--CCEEEEEE---CCCCeEEEEEC--CCCCEEEEEECCcCccccccccCCcCCceEEE
Confidence 232221 11 345667766 67887764 25668889897 577777777632 1 234689
Q ss_pred eecccchhh
Q 000080 2373 LPLKLLNFA 2381 (2389)
Q Consensus 2373 A~~~~~~~~ 2381 (2389)
|.+|++++.
T Consensus 210 A~d~~~~~l 218 (243)
T 3mbr_X 210 AFDAEHDRL 218 (243)
T ss_dssp EEETTTTEE
T ss_pred EEcCCCCEE
Confidence 999987754
No 260
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=87.12 E-value=15 Score=42.86 Aligned_cols=148 Identities=8% Similarity=0.064 Sum_probs=93.6
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCce---eeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKA---TATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~---l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
-.|++.++|.++++.-.++.+.++++..... +...+ ++-... + .......|+++|++++|-++.+-...+||.
T Consensus 73 EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~-~~~~~~--~-~N~g~EGLA~d~~~~~L~va~E~~p~~i~~ 148 (255)
T 3qqz_A 73 ETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIK-IPLQES--P-TNCGFEGLAYSRQDHTFWFFKEKNPIEVYK 148 (255)
T ss_dssp EEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEE-CCCSSC--C-CSSCCEEEEEETTTTEEEEEEESSSEEEEE
T ss_pred HHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeec-cccccc--c-ccCCcceEEEeCCCCEEEEEECcCCceEEE
Confidence 4568889998877765778899998865542 22222 110000 1 235589999999998888888777777776
Q ss_pred CCCCCccCcccceee-------eecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCce--EEEE-eec---
Q 000080 2300 LEVGGRSNVRPMESC-------LCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSR--ASIT-CHE--- 2366 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl-------~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v--~sL~-GH~--- 2366 (2389)
+. |-. ....+.-. .-+-....+++|.|.+|++++.+ ...+.+-..|. .++.+ ..|. |..
T Consensus 149 ~~-g~~-~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS---~~s~~L~~~d~---~g~~~~~~~L~~g~~~l~ 220 (255)
T 3qqz_A 149 VN-GLL-SSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLS---HESRALQEVTL---VGEVIGEMSLTKGSRGLS 220 (255)
T ss_dssp EE-STT-CSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEE---TTTTEEEEECT---TCCEEEEEECSTTGGGCS
T ss_pred Ec-ccc-cCCceeeecchhhccccccCCceeEEEcCCCCeEEEEE---CCCCeEEEEcC---CCCEEEEEEcCCccCCcc
Confidence 65 200 00111111 11344678999999999988874 57888999995 45543 3343 221
Q ss_pred ---CcEEEEeecccchhhh
Q 000080 2367 ---GLYDLFLPLKLLNFAL 2382 (2389)
Q Consensus 2367 ---~~V~svA~~~~~~~~~ 2382 (2389)
.+.-.||+.++|+--+
T Consensus 221 ~~~~qpEGia~d~~G~lyI 239 (255)
T 3qqz_A 221 HNIKQAEGVAMDASGNIYI 239 (255)
T ss_dssp SCCCSEEEEEECTTCCEEE
T ss_pred cccCCCCeeEECCCCCEEE
Confidence 2556899999997433
No 261
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=87.10 E-value=18 Score=47.22 Aligned_cols=145 Identities=10% Similarity=0.094 Sum_probs=91.6
Q ss_pred cCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCC-CCCCCCEEEEEECCCCCEEEEEeCCCcE
Q 000080 2217 VENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPP-PYALASISALQFDHYGHRFASAALDGTV 2295 (2389)
Q Consensus 2217 v~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~-~GH~~~V~sVaFSPDG~~LASgS~DgTV 2295 (2389)
+.+..|+++...++|.+.+ |+.++-|..||..+++... +...++. +. .-....|++++..++|+.|-.|+.++.|
T Consensus 354 l~~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~-~~~~~~~--~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl 429 (795)
T 4a2l_A 354 LSDNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTS-YTLQEDE--SARGIGSNNIKAVYVDEKKSLVYIGTHAGGL 429 (795)
T ss_dssp CSCSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEE-ECCC--------CCSCSCEEEEEEETTTTEEEEEETTTEE
T ss_pred CCCCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEE-EecCCCC--cccCCCCccEEEEEEcCCCCEEEEEeCcCce
Confidence 3344579999999998666 6777779999987776433 3210000 00 0123679999999999856667777789
Q ss_pred EEeeCCCCCccCcccceeee-----ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEe------
Q 000080 2296 CTWQLEVGGRSNVRPMESCL-----CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITC------ 2364 (2389)
Q Consensus 2296 kLWDl~tggrs~~k~l~tl~-----gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~G------ 2364 (2389)
..+|.+++. +..+. .+...|.+++..+ +|++.+.+ .+ -+.+||. .+ .....+..
T Consensus 430 ~~~d~~~~~------~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt----~~-Gl~~~~~--~~-~~~~~~~~~~~~~~ 494 (795)
T 4a2l_A 430 SILHRNSGQ------VENFNQRNSQLVNENVYAILPDG-EGNLWLGT----LS-ALVRFNP--EQ-RSFTTIEKEKDGTP 494 (795)
T ss_dssp EEEETTTCC------EEEECTTTSCCSCSCEEEEEECS-SSCEEEEE----SS-CEEEEET--TT-TEEEECCBCTTCCB
T ss_pred eEEeCCCCc------EEEeecCCCCcCCCeeEEEEECC-CCCEEEEe----cC-ceeEEeC--CC-CeEEEccccccccc
Confidence 999998752 11111 2346799999888 88877643 33 4778885 22 22222221
Q ss_pred -ecCcEEEEeecccchh
Q 000080 2365 -HEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2365 -H~~~V~svA~~~~~~~ 2380 (2389)
+.+.|.++...++|+.
T Consensus 495 ~~~~~i~~i~~d~~g~l 511 (795)
T 4a2l_A 495 VVSKQITTLFRDSHKRL 511 (795)
T ss_dssp CCCCCEEEEEECTTCCE
T ss_pred cCCceEEEEEECCCCCE
Confidence 2356777777777753
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=86.99 E-value=3.5 Score=52.88 Aligned_cols=124 Identities=9% Similarity=-0.004 Sum_probs=75.9
Q ss_pred CCCC---eEEEEeCCCcEEEeecCCCceeeEecccCCC------------------CCC------------------CCC
Q 000080 2229 PLRP---FFLVGSSNTHIYLWEFGKDKATATYGVLPAA------------------NVP------------------PPY 2269 (2389)
Q Consensus 2229 PdG~---~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh------------------~~p------------------~~G 2269 (2389)
.+|+ .++.++.||.++.+|..+|+.+..+..-+.- ..| ..|
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~G 410 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLG 410 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTC
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCcc
Confidence 5784 7889999999999999999987665311000 000 011
Q ss_pred CCCCEEEEEECCCCCEEEEEe---------------------------------CCCcEEEeeCCCCCccCcccceeeee
Q 000080 2270 ALASISALQFDHYGHRFASAA---------------------------------LDGTVCTWQLEVGGRSNVRPMESCLC 2316 (2389)
Q Consensus 2270 H~~~V~sVaFSPDG~~LASgS---------------------------------~DgTVkLWDl~tggrs~~k~l~tl~g 2316 (2389)
..++ ..++|+|+..++.... .+|+|.-||+.+|. ...+...
T Consensus 411 g~~w-~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~-----~~W~~~~ 484 (582)
T 1flg_A 411 GKNW-NPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGK-----VVWEHKE 484 (582)
T ss_dssp SSCS-SCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCC-----EEEEEEE
T ss_pred ccCC-CCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCC-----EEEEecC
Confidence 1111 2568888865444332 36899999999973 3333322
Q ss_pred cCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEee
Q 000080 2317 FSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCH 2365 (2389)
Q Consensus 2317 Hs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH 2365 (2389)
+ ..+..-.... .|.++..+ +.|+.++.+|. .+++.+..++..
T Consensus 485 ~-~~~~~g~~~t-agglvf~g---~~dg~l~A~D~--~tG~~lW~~~~~ 526 (582)
T 1flg_A 485 H-LPLWAGVLAT-AGNLVFTG---TGDGYFKAFDA--KSGKELWKFQTG 526 (582)
T ss_dssp S-SCCCSCCEEE-TTTEEEEE---CTTSEEEEEET--TTCCEEEEEECS
T ss_pred C-CCCcccceEe-CCCEEEEE---CCCCcEEEEEC--CCCCEEEEecCC
Confidence 2 1222222233 34566664 58999999997 678888877653
No 263
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=86.76 E-value=2.4 Score=50.63 Aligned_cols=107 Identities=12% Similarity=0.083 Sum_probs=63.9
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCC----CCEEEEEeCC-----C
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHY----GHRFASAALD-----G 2293 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD----G~~LASgS~D-----g 2293 (2389)
+.++|.|||+++++ ..++.|++++ +|+.. .+..++.. ..-......|+|+|| |..+++-+.+ +
T Consensus 34 ~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~-~~~~~~v~----~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 34 WALAFLPDGGMLIA-ERPGRIRLFR--EGRLS-TYAELSVY----HRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp EEEEECTTSCEEEE-ETTTEEEEEE--TTEEE-EEEECCCC----CSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred eEEEEcCCCeEEEE-eCCCeEEEEE--CCCcc-EeecceEe----ecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 78899999997776 4569999998 45432 22111100 011245799999999 5666665543 6
Q ss_pred cEEEeeCCCCCccCccccee-ee---ecCCCeeEEEEecCCCCEEEEee
Q 000080 2294 TVCTWQLEVGGRSNVRPMES-CL---CFSSHAMDVSYITSSGSVIAAAG 2338 (2389)
Q Consensus 2294 TVkLWDl~tggrs~~k~l~t-l~---gHs~~V~sVAFSP~DGslLASAG 2338 (2389)
.|..+++..+.-...+.+.+ +. +.......++|.| ||.+.++.|
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEEC
Confidence 67777776321000012221 22 1112336899999 999988865
No 264
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.28 E-value=5.8 Score=46.33 Aligned_cols=117 Identities=7% Similarity=-0.042 Sum_probs=68.1
Q ss_pred CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCC-CCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcc
Q 000080 2231 RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYA-LASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVR 2309 (2389)
Q Consensus 2231 G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH-~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k 2309 (2389)
+..+..++.++.|+.+|..+|+.+-.+.. +... +.... ...+.+ ....++..+..++.|+.|..+|.++|.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~-~~~~-~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~----- 124 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSL-AEKD-GWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGT----- 124 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC-CC----CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCC-----
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecC-cccc-ccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCC-----
Confidence 55677778899999999999998766541 1110 00000 122322 122346678888999999999999973
Q ss_pred cceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE
Q 000080 2310 PMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT 2363 (2389)
Q Consensus 2310 ~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~ 2363 (2389)
...............+.. +|.+++. +.|+.|..+|. .+++.+....
T Consensus 125 ~~W~~~~~~~~~~~p~~~--~~~v~v~----~~~g~l~~~d~--~tG~~~W~~~ 170 (376)
T 3q7m_A 125 VAWQTKVAGEALSRPVVS--DGLVLIH----TSNGQLQALNE--ADGAVKWTVN 170 (376)
T ss_dssp EEEEEECSSCCCSCCEEE--TTEEEEE----CTTSEEEEEET--TTCCEEEEEE
T ss_pred EEEEEeCCCceEcCCEEE--CCEEEEE----cCCCeEEEEEC--CCCcEEEEEe
Confidence 233332222111122222 4555543 46888999996 4666665554
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=86.06 E-value=14 Score=42.57 Aligned_cols=143 Identities=7% Similarity=0.013 Sum_probs=77.7
Q ss_pred EEEEEEcCCCCeEEEEeCCC--cEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2222 TRAFSSHPLRPFFLVGSSNT--HIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~Dg--TIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
...|++.|+|+++++..... .|..+|..+|+...... .+. ...-..+++.++++.+++-+.++.|...|
T Consensus 74 p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~-~~~--------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d 144 (306)
T 2p4o_A 74 VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLT-LPD--------AIFLNGITPLSDTQYLTADSYRGAIWLID 144 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEE-CTT--------CSCEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred ceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEe-CCC--------ccccCcccccCCCcEEEEECCCCeEEEEe
Confidence 46789999999877765433 46667777777543322 111 13346667777777777766788888888
Q ss_pred CCCCCccCcc---c-ce--eeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc--eEEEEeecCcEEE
Q 000080 2300 LEVGGRSNVR---P-ME--SCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS--RASITCHEGLYDL 2371 (2389)
Q Consensus 2300 l~tggrs~~k---~-l~--tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~--v~sL~GH~~~V~s 2371 (2389)
..++. .... . +. ...+.-...+.+ +| ||+.|-.+- +..+.|..+|+.. .++. ...+. .-..-..
T Consensus 145 ~~~~~-~~v~~~~~~~~~~~~~~~~~~pngi--s~-dg~~lyv~d--~~~~~I~~~~~~~-~g~~~~~~~~~-~~~~P~g 216 (306)
T 2p4o_A 145 VVQPS-GSIWLEHPMLARSNSESVFPAANGL--KR-FGNFLYVSN--TEKMLLLRIPVDS-TDKPGEPEIFV-EQTNIDD 216 (306)
T ss_dssp TTTTE-EEEEEECGGGSCSSTTCCSCSEEEE--EE-ETTEEEEEE--TTTTEEEEEEBCT-TSCBCCCEEEE-ESCCCSS
T ss_pred CCCCc-EeEEEECCccccccccCCCCcCCCc--Cc-CCCEEEEEe--CCCCEEEEEEeCC-CCCCCccEEEe-ccCCCCC
Confidence 76431 0000 0 00 000111234555 78 666544432 5678999999732 1221 22221 1123345
Q ss_pred Eeecccchhh
Q 000080 2372 FLPLKLLNFA 2381 (2389)
Q Consensus 2372 vA~~~~~~~~ 2381 (2389)
++..++|+..
T Consensus 217 i~vd~dG~l~ 226 (306)
T 2p4o_A 217 FAFDVEGNLY 226 (306)
T ss_dssp EEEBTTCCEE
T ss_pred eEECCCCCEE
Confidence 6666666543
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=85.99 E-value=16 Score=42.61 Aligned_cols=139 Identities=9% Similarity=-0.057 Sum_probs=82.6
Q ss_pred EEEEEcCCC-CeEEEEeCCCcEEEeecCC---CceeeEecccCCCCCCCCCCCCCEEEEEECCCC-CEEEEEeCCCcEEE
Q 000080 2223 RAFSSHPLR-PFFLVGSSNTHIYLWEFGK---DKATATYGVLPAANVPPPYALASISALQFDHYG-HRFASAALDGTVCT 2297 (2389)
Q Consensus 2223 rsVAFsPdG-~~LASGS~DgTIRLWDl~t---Gk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG-~~LASgS~DgTVkL 2297 (2389)
.+++|++++ .++.+-..++.|+.+|... +....++. +. .......|++++.+ +.+.+-..+++|.+
T Consensus 33 ~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~--~~-------~~~~p~glavd~~~~~ly~~d~~~~~I~~ 103 (316)
T 1ijq_A 33 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI--SR-------DIQAPDGLAVDWIHSNIYWTDSVLGTVSV 103 (316)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE--CS-------SCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE--eC-------CCCCcCEEEEeecCCeEEEEECCCCEEEE
Confidence 788999864 5677777889999999864 13223321 11 11345789999754 56666678899999
Q ss_pred eeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE-eecCcEEEEeecc
Q 000080 2298 WQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT-CHEGLYDLFLPLK 2376 (2389)
Q Consensus 2298 WDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~-GH~~~V~svA~~~ 2376 (2389)
.|+.... .+.+ ........+++++.|.+|.+..+. . ...+.|...++ .++....+. ..-..-..+|.++
T Consensus 104 ~~~~g~~---~~~~--~~~~~~~P~~iavdp~~g~ly~~d-~-~~~~~I~~~~~---dG~~~~~~~~~~~~~P~gla~d~ 173 (316)
T 1ijq_A 104 ADTKGVK---RKTL--FRENGSKPRAIVVDPVHGFMYWTD-W-GTPAKIKKGGL---NGVDIYSLVTENIQWPNGITLDL 173 (316)
T ss_dssp EETTSSS---EEEE--EECTTCCEEEEEEETTTTEEEEEE-C-SSSCEEEEEET---TSCCEEEEECSSCSCEEEEEEET
T ss_pred EeCCCCc---eEEE--EECCCCCcceEEeCCCCCEEEEEc-c-CCCCeEEEEcC---CCCCeEEEEECCCCCceEEEEec
Confidence 9987421 1111 122235678999999555555552 1 12256777775 344444442 2234456778877
Q ss_pred cchh
Q 000080 2377 LLNF 2380 (2389)
Q Consensus 2377 ~~~~ 2380 (2389)
++++
T Consensus 174 ~~~~ 177 (316)
T 1ijq_A 174 LSGR 177 (316)
T ss_dssp TTTE
T ss_pred cCCE
Confidence 6543
No 267
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=85.92 E-value=5.1 Score=46.77 Aligned_cols=112 Identities=7% Similarity=0.027 Sum_probs=71.5
Q ss_pred CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCccc
Q 000080 2231 RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRP 2310 (2389)
Q Consensus 2231 G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~ 2310 (2389)
+..+..++.++.|..+|..+|+.+..... .....+.. ++..+..++.|+.|..+|.++|. .
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~------------~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~-----~ 299 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKREL------------GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGV-----T 299 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECC------------CCEEEEEE--ETTEEEEEETTCCEEEEETTTCC-----E
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccC------------CCCCCceE--ECCEEEEEcCCCeEEEEECCCCc-----E
Confidence 45666778899999999999998766531 22344433 46788888899999999999873 2
Q ss_pred ceeeee-cCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcE
Q 000080 2311 MESCLC-FSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLY 2369 (2389)
Q Consensus 2311 l~tl~g-Hs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V 2369 (2389)
...... ........+.. +|.+++ + +.++.|..+|. .+++.+.........+
T Consensus 300 ~w~~~~~~~~~~~~~~~~--~~~l~v-~---~~~g~l~~~d~--~tG~~~~~~~~~~~~~ 351 (376)
T 3q7m_A 300 LWTQSDLLHRLLTSPVLY--NGNLVV-G---DSEGYLHWINV--EDGRFVAQQKVDSSGF 351 (376)
T ss_dssp EEEECTTTTSCCCCCEEE--TTEEEE-E---CTTSEEEEEET--TTCCEEEEEECCTTCB
T ss_pred EEeecccCCCcccCCEEE--CCEEEE-E---eCCCeEEEEEC--CCCcEEEEEecCCCcc
Confidence 332221 11222233333 345444 3 47899999997 4677776665433333
No 268
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=85.57 E-value=14 Score=44.62 Aligned_cols=138 Identities=10% Similarity=-0.051 Sum_probs=83.9
Q ss_pred EEEEEEcCC-CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCC-CCEEEEEeCCCcEEEee
Q 000080 2222 TRAFSSHPL-RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHY-GHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2222 VrsVAFsPd-G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD-G~~LASgS~DgTVkLWD 2299 (2389)
..+|+|++. +.++.+-...+.|+.++...+. +.++.. .+ ......|++++. |+.+.+-...++|.+.+
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~-~~~~~~-~~--------~~~p~glavd~~~g~lY~~d~~~~~I~~~~ 187 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTLDRILRANLNGSN-VEEVVS-TG--------LESPGGLAVDWVHDKLYWTDSGTSRIEVAN 187 (386)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCC-EEEEEC-SS--------CSCCCCEEEETTTTEEEEEETTTTEEEECB
T ss_pred cEEEEEecCCCeEEEEeCCCCcEEEEecCCCC-cEEEEe-CC--------CCCccEEEEEeCCCeEEEEcCCCCeEEEEe
Confidence 378899975 5567777788999999986544 333210 11 133467899986 45666667788899888
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCC-CeEEEeeCCCCCCCceEEEE-eecCcEEEEeeccc
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNG-INVVVWDTLAPPTSSRASIT-CHEGLYDLFLPLKL 2377 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D-~TVrLWD~l~~tg~~v~sL~-GH~~~V~svA~~~~ 2377 (2389)
+.... ........-...+++++.|.+|.+..+- ..+ +.|...|+ .+..+..+. ..-..-..||.+++
T Consensus 188 ~dg~~-----~~~l~~~~l~~P~giavdp~~g~ly~td---~~~~~~I~r~~~---dG~~~~~~~~~~~~~PnGlavd~~ 256 (386)
T 3v65_B 188 LDGAH-----RKVLLWQSLEKPRAIALHPMEGTIYWTD---WGNTPRIEASSM---DGSGRRIIADTHLFWPNGLTIDYA 256 (386)
T ss_dssp TTSCS-----CEEEECSSCSCEEEEEEETTTTEEEEEE---CSSSCEEEEEET---TSCSCEEEECSSCSCEEEEEEEGG
T ss_pred CCCCc-----eEEeecCCCCCCcEEEEEcCCCeEEEec---cCCCCEEEEEeC---CCCCcEEEEECCCCCeeeEEEeCC
Confidence 87431 1111222235678999999555555552 233 66777775 344444443 22334567888766
Q ss_pred chh
Q 000080 2378 LNF 2380 (2389)
Q Consensus 2378 ~~~ 2380 (2389)
+++
T Consensus 257 ~~~ 259 (386)
T 3v65_B 257 GRR 259 (386)
T ss_dssp GTE
T ss_pred CCE
Confidence 553
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=85.49 E-value=4.4 Score=49.78 Aligned_cols=111 Identities=11% Similarity=0.116 Sum_probs=69.4
Q ss_pred EEEEEEcCCCC-eEEEEeCCC----cEEEeecCCCcee--eEecccCCCCCCCCCCCCCEEEEEECC-CCCEEEEEeCCC
Q 000080 2222 TRAFSSHPLRP-FFLVGSSNT----HIYLWEFGKDKAT--ATYGVLPAANVPPPYALASISALQFDH-YGHRFASAALDG 2293 (2389)
Q Consensus 2222 VrsVAFsPdG~-~LASGS~Dg----TIRLWDl~tGk~l--~Tl~vl~gh~~p~~GH~~~V~sVaFSP-DG~~LASgS~Dg 2293 (2389)
-+.|+|+++|+ ++++...++ .+...+ ..|... .++.. ......|+++| +|+.+++-..++
T Consensus 181 P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~~~~~~~l~~-----------~~~p~giavdp~~g~lyv~d~~~~ 248 (430)
T 3tc9_A 181 VRTICWTHEADSMIITNDQNNNDRPNNYILT-RESGFKVITELTK-----------GQNCNGAETHPINGELYFNSWNAG 248 (430)
T ss_dssp EEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGTSCSEEEEEE-----------CSSCCCEEECTTTCCEEEEETTTT
T ss_pred cceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCceeeeeeecc-----------CCCceEEEEeCCCCEEEEEECCCC
Confidence 37889999999 555554333 233333 344332 23321 12247789999 788888888889
Q ss_pred cEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeC
Q 000080 2294 TVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDT 2351 (2389)
Q Consensus 2294 TVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~ 2351 (2389)
.|..+|..++. ...+..... ...-+.++|+| +|++|..+ ....+.|..+|.
T Consensus 249 ~V~~~~~~~~~---~~~~~~~~~-~~~P~gia~~p-dG~~lyv~--d~~~~~I~~~~~ 299 (430)
T 3tc9_A 249 QVFRYDFTTQE---TTPLFTIQD-SGWEFHIQFHP-SGNYAYIV--VVNQHYILRSDY 299 (430)
T ss_dssp EEEEEETTTTE---EEEEEECSS-SSCCEEEEECT-TSSEEEEE--ETTTTEEEEEEE
T ss_pred EEEEEECCCCc---EEEEEEcCC-CCcceeEEEcC-CCCEEEEE--ECCCCEEEEEeC
Confidence 99999998641 112222211 23467899999 89844333 257788999886
No 270
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=85.29 E-value=13 Score=46.21 Aligned_cols=113 Identities=7% Similarity=0.019 Sum_probs=65.3
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECC----CCCEEEEEeC-------
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDH----YGHRFASAAL------- 2291 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSP----DG~~LASgS~------- 2291 (2389)
++++|.|||+++++-...+.|++++..+|+... +..++.-. ..+........|+|+| +|...++-+.
T Consensus 30 ~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~-~~~~~~~~-~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 30 HALLWGPDNQIWLTERATGKILRVNPESGSVKT-VFQVPEIV-NDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECTTCC-CCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred eEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeE-EecCCccc-cccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 789999999988876555579999876665422 21122110 0011235688999999 5666666553
Q ss_pred -----CCcEEEeeCCCCC-c-cCccccee-eee-cCCCeeEEEEecCCCCEEEEee
Q 000080 2292 -----DGTVCTWQLEVGG-R-SNVRPMES-CLC-FSSHAMDVSYITSSGSVIAAAG 2338 (2389)
Q Consensus 2292 -----DgTVkLWDl~tgg-r-s~~k~l~t-l~g-Hs~~V~sVAFSP~DGslLASAG 2338 (2389)
...|.-+++..+. + ...+.+.. +.. ..+....++|.| ||.+.++.|
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEEC
Confidence 2345555543211 0 00112221 211 123468899999 999999876
No 271
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=85.24 E-value=14 Score=48.22 Aligned_cols=140 Identities=6% Similarity=0.033 Sum_probs=90.0
Q ss_pred eeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
..|+++...++|++|-.|+.++-|.++|..+++.. .+.. .. + ..+...|+++...++|+..+... +.+.++|
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~--~~--~-~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~ 477 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQ--RN--S-QLVNENVYAILPDGEGNLWLGTL--SALVRFN 477 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECT--TT--S-CCSCSCEEEEEECSSSCEEEEES--SCEEEEE
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-Eeec--CC--C-CcCCCeeEEEEECCCCCEEEEec--CceeEEe
Confidence 34699999999994555777777999998877643 3321 00 1 12346799999999998777665 4588899
Q ss_pred CCCCCccCcccceee----eecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE-------eecCc
Q 000080 2300 LEVGGRSNVRPMESC----LCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT-------CHEGL 2368 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl----~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~-------GH~~~ 2368 (2389)
.+++. ...+... .-+...|+++...+ +|++.+.+ . +-|..||.. +++ . .+. -+.+.
T Consensus 478 ~~~~~---~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt----~-~Gl~~~~~~--~~~-~-~~~~~~~~~~l~~~~ 544 (795)
T 4a2l_A 478 PEQRS---FTTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGG----E-EGLSVFKQE--GLD-I-QKASILPVSNVTKLF 544 (795)
T ss_dssp TTTTE---EEECCBCTTCCBCCCCCEEEEEECT-TCCEEEEE----S-SCEEEEEEE--TTE-E-EECCCSCSCGGGGSC
T ss_pred CCCCe---EEEccccccccccCCceEEEEEECC-CCCEEEEe----C-CceEEEeCC--CCe-E-EEecCCCCCCCCCCe
Confidence 88752 0111110 11246789999998 88877643 3 347778852 222 2 222 13456
Q ss_pred EEEEeecccchh
Q 000080 2369 YDLFLPLKLLNF 2380 (2389)
Q Consensus 2369 V~svA~~~~~~~ 2380 (2389)
|.+++..++|+.
T Consensus 545 i~~i~~d~~g~l 556 (795)
T 4a2l_A 545 TNCIYEASNGII 556 (795)
T ss_dssp EEEEEECTTSCE
T ss_pred eEEEEECCCCCE
Confidence 888888888873
No 272
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=84.70 E-value=11 Score=44.18 Aligned_cols=106 Identities=15% Similarity=0.139 Sum_probs=66.2
Q ss_pred EEEEEcCCCCeEEEEeCCCcE-EEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCC
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHI-YLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLE 2301 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTI-RLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~ 2301 (2389)
..|++.+++..++.+. ++.| |-+|-+.-..... . ++...+.+++|+|+|+.+|.+...+..+-+|-.
T Consensus 125 ~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~-~----------~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g 192 (327)
T 2xbg_A 125 RLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALV-Q----------EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG 192 (327)
T ss_dssp EEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEE-C----------SCCCCEEEEEECTTSCEEEEETTSSEEEEECTT
T ss_pred EEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEee-c----------CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC
Confidence 6778888888887765 5544 5555332222211 1 123568999999999999888776666666531
Q ss_pred CCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEee
Q 000080 2302 VGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWD 2350 (2389)
Q Consensus 2302 tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD 2350 (2389)
+.+ -+++ -......+.++++.+ +|++++.+ .++.+.+++
T Consensus 193 --G~t-W~~~--~~~~~~~~~~~~~~~-~g~~~~~~----~~G~~~~s~ 231 (327)
T 2xbg_A 193 --QTA-WEPH--NRTTSRRLHNMGFTP-DGRLWMIV----NGGKIAFSD 231 (327)
T ss_dssp --CSS-CEEE--ECCSSSCEEEEEECT-TSCEEEEE----TTTEEEEEE
T ss_pred --CCc-eeEC--CCCCCCccceeEECC-CCCEEEEe----CCceEEEec
Confidence 110 0111 123456788999998 78888763 567777773
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=83.86 E-value=25 Score=42.74 Aligned_cols=139 Identities=9% Similarity=-0.054 Sum_probs=83.4
Q ss_pred EEEEEEcCC-CCeEEEEeCCCcEEEeecCCCc---eeeEecccCCCCCCCCCCCCCEEEEEECC-CCCEEEEEeCCCcEE
Q 000080 2222 TRAFSSHPL-RPFFLVGSSNTHIYLWEFGKDK---ATATYGVLPAANVPPPYALASISALQFDH-YGHRFASAALDGTVC 2296 (2389)
Q Consensus 2222 VrsVAFsPd-G~~LASGS~DgTIRLWDl~tGk---~l~Tl~vl~gh~~p~~GH~~~V~sVaFSP-DG~~LASgS~DgTVk 2296 (2389)
+.+|+|++. +.++.+-..++.|+.+++.... ...++. .. .......|++.+ .|+.+.+-...++|.
T Consensus 114 ~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~---~~------~~~~p~glavD~~~~~lY~~d~~~~~I~ 184 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---SR------DIQAPDGLAVDWIHSNIYWTDSVLGTVS 184 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE---CS------SCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE---eC------CCCCcccEEEEecCCceEEEECCCCeEE
Confidence 388999985 5567777778899999985421 122221 11 124578999998 456666767788999
Q ss_pred EeeCCCCCccCcccceee-eecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE-eecCcEEEEee
Q 000080 2297 TWQLEVGGRSNVRPMESC-LCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT-CHEGLYDLFLP 2374 (2389)
Q Consensus 2297 LWDl~tggrs~~k~l~tl-~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~-GH~~~V~svA~ 2374 (2389)
+-+++... ...+ ..--...++|++.|..|.+..|- . ...+.|...++ .+..+..+. ..-..-..||.
T Consensus 185 ~~~~~g~~------~~~l~~~~~~~P~~iavdp~~g~ly~td-~-~~~~~I~~~~~---dG~~~~~~~~~~l~~P~glav 253 (400)
T 3p5b_L 185 VADTKGVK------RKTLFRENGSKPRAIVVDPVHGFMYWTD-W-GTPAKIKKGGL---NGVDIYSLVTENIQWPNGITL 253 (400)
T ss_dssp EECTTTCS------EEEEEECSSCCEEEEEEETTTTEEEEEE-C-SSSCCEEEEET---TSCSCEEEECSSCSCEEEEEE
T ss_pred EEeCCCCc------eEEEEeCCCCCcceEEEecccCeEEEEe-C-CCCCEEEEEeC---CCCccEEEEECCCCceEEEEE
Confidence 98887431 1222 22234578999999555565552 1 22356777775 344444442 22245567787
Q ss_pred cccchh
Q 000080 2375 LKLLNF 2380 (2389)
Q Consensus 2375 ~~~~~~ 2380 (2389)
++++++
T Consensus 254 d~~~~~ 259 (400)
T 3p5b_L 254 DLLSGR 259 (400)
T ss_dssp ETTTTE
T ss_pred EeCCCE
Confidence 766543
No 274
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.47 E-value=3 Score=48.48 Aligned_cols=140 Identities=13% Similarity=0.006 Sum_probs=74.7
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCC
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEV 2302 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~t 2302 (2389)
..++|||||.+.+. .+|.++--+..+++.. .+... +..+-..|- ..-.++.|.|+|.+.|+ .||.|.-|+--+
T Consensus 44 ~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~-~W~~s-~t~IG~~Gw-~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 44 KFLFLSPGGELYGV--LNDKIYKGTPPTHDND-NWMGR-AKKIGNGGW-NQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEEESCCCSTTC-CHHHH-CEEEECSCG-GGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred eeEEECCCccEEEE--eCCeEEEECCCCCCcc-ccccc-ccEeccccc-ccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 57899999998887 6665555554342211 11000 000000011 12488999999999999 569998887643
Q ss_pred CCccCccccee--eeec--CCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc-----eEEEE--eecCcEEE
Q 000080 2303 GGRSNVRPMES--CLCF--SSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS-----RASIT--CHEGLYDL 2371 (2389)
Q Consensus 2303 ggrs~~k~l~t--l~gH--s~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~-----v~sL~--GH~~~V~s 2371 (2389)
.+. ..-+.. ..+- =..+..|.|.| +|.+-|.+ |+.+.=+. .|++.+ ..++. +.-+..+-
T Consensus 117 ~~~--~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~-----dg~lyr~~--~P~~~~~~wl~~~~~~g~~g~~~yr~ 186 (236)
T 1tl2_A 117 SDT--DNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH-----GQQFYKAL--PPVSNQDNWLARATKIGQGGWDTFKF 186 (236)
T ss_dssp STT--CCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE-----TTEEEEEC--CCSSTTCCHHHHCEEEESSSGGGEEE
T ss_pred CCC--CceeccccEeccCCCCceEEEEECC-CceEEEEe-----CCcEEecC--CCCCCCcccccccceeccCCcceEEE
Confidence 221 111111 1110 03567899999 99999863 55533232 232221 12222 34445556
Q ss_pred Eeecccch
Q 000080 2372 FLPLKLLN 2379 (2389)
Q Consensus 2372 vA~~~~~~ 2379 (2389)
+.+.++|+
T Consensus 187 l~f~~~G~ 194 (236)
T 1tl2_A 187 LFFSSVGT 194 (236)
T ss_dssp EEECTTSC
T ss_pred EEECCCCc
Confidence 66666664
No 275
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=83.30 E-value=1.8 Score=55.26 Aligned_cols=82 Identities=15% Similarity=0.020 Sum_probs=52.7
Q ss_pred CCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeee-ec
Q 000080 2239 SNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCL-CF 2317 (2389)
Q Consensus 2239 ~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~-gH 2317 (2389)
.++.|..||..+|+.+-++.. + ..+.+..+...|.++..++.||+|+.+|.++|. .+.++. +.
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~--~---------~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~-----~lw~~~~~~ 505 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWE--K---------FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK-----ELWNFKMPS 505 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEE--S---------SCCCSBCEEETTTEEEEECTTSEEEEEETTTCC-----EEEEEECSS
T ss_pred CCCeEEEEECCCCCEEEEecC--C---------CCccceeEEECCCEEEEEcCCCeEEEEECCCCC-----EEEEEeCCC
Confidence 468999999999998877641 1 112223334456677779999999999999983 343333 22
Q ss_pred CCCeeEEEEecCCCCEEEEe
Q 000080 2318 SSHAMDVSYITSSGSVIAAA 2337 (2389)
Q Consensus 2318 s~~V~sVAFSP~DGslLASA 2337 (2389)
......+.|.. +|++++..
T Consensus 506 ~~~~~p~~~~~-~G~~yv~~ 524 (571)
T 2ad6_A 506 GGIGSPMTYSF-KGKQYIGS 524 (571)
T ss_dssp CCCSCCEEEEE-TTEEEEEE
T ss_pred CcEeeeEEEEE-CCEEEEEE
Confidence 22233466777 77766543
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=83.28 E-value=16 Score=43.36 Aligned_cols=137 Identities=10% Similarity=-0.032 Sum_probs=82.9
Q ss_pred EEEEEEcCC-CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCC-CCEEEEEeCCCcEEEee
Q 000080 2222 TRAFSSHPL-RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHY-GHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2222 VrsVAFsPd-G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD-G~~LASgS~DgTVkLWD 2299 (2389)
..+|+|++. +.++.+-...+.|+.++...+....... .+ ......+++.+. |+.+.+-...++|.+.+
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~--~~--------~~~p~glavd~~~g~ly~~d~~~~~I~~~~ 144 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS--TG--------LESPGGLAVDWVHDKLYWTDSGTSRIEVAN 144 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--SS--------CSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe--CC--------CCCccEEEEecCCCeEEEEcCCCCeEEEEc
Confidence 378899975 5566777788999999986544322221 01 133578999985 55667777788999999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCC-CeEEEeeCCCCCCCceEEEE-eecCcEEEEeeccc
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNG-INVVVWDTLAPPTSSRASIT-CHEGLYDLFLPLKL 2377 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D-~TVrLWD~l~~tg~~v~sL~-GH~~~V~svA~~~~ 2377 (2389)
+.... ........-...+++++.|.+|.+..|- ..+ +.|...|+ .+.....+. ..-..-..||.+++
T Consensus 145 ~dG~~-----~~~l~~~~l~~P~~iavdp~~g~ly~td---~~~~~~I~r~~~---dG~~~~~~~~~~~~~PnGla~d~~ 213 (349)
T 3v64_C 145 LDGAH-----RKVLLWQSLEKPRAIALHPMEGTIYWTD---WGNTPRIEASSM---DGSGRRIIADTHLFWPNGLTIDYA 213 (349)
T ss_dssp TTSCS-----CEEEECTTCSCEEEEEEETTTTEEEEEE---CSSSCEEEEEET---TSCSCEESCCSSCSCEEEEEEETT
T ss_pred CCCCc-----eEEEEeCCCCCcceEEEecCcCeEEEec---cCCCCEEEEEeC---CCCCcEEEEECCCCCcceEEEeCC
Confidence 87431 1111122234578999999566666553 233 67777775 233333332 12233456777765
Q ss_pred ch
Q 000080 2378 LN 2379 (2389)
Q Consensus 2378 ~~ 2379 (2389)
++
T Consensus 214 ~~ 215 (349)
T 3v64_C 214 GR 215 (349)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 277
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=83.16 E-value=14 Score=44.08 Aligned_cols=108 Identities=12% Similarity=0.056 Sum_probs=61.9
Q ss_pred EEEEEcCCCC-eEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCC----CCEEEEEeC------
Q 000080 2223 RAFSSHPLRP-FFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHY----GHRFASAAL------ 2291 (2389)
Q Consensus 2223 rsVAFsPdG~-~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD----G~~LASgS~------ 2291 (2389)
+.|+|.|||+ ++++ ..++.|++++. +|+....+..++. +...| ......|+|+|| |..+++-+.
T Consensus 21 ~~i~~~pdG~~l~V~-e~~G~i~~~~~-~g~~~~~~~~~~~--v~~~g-~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 21 WALAFLPDNHGMLIT-LRGGELRHWQA-GKGLSAPLSGVPD--VWAHG-QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp EEEEECSTTCCEEEE-ETTTEEEEEET-TTEECCCCBSCCC--CCCST-TCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred EEEEEcCCCCEEEEE-eCCceEEEEeC-CCceeeEecCCcc--cccCC-CCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 8899999999 6665 56799999985 4543222221110 00011 245789999995 666666443
Q ss_pred -CCcEEEeeCCCCCc--cCcccce-ee-----eecCCCeeEEEEecCCCCEEEEee
Q 000080 2292 -DGTVCTWQLEVGGR--SNVRPME-SC-----LCFSSHAMDVSYITSSGSVIAAAG 2338 (2389)
Q Consensus 2292 -DgTVkLWDl~tggr--s~~k~l~-tl-----~gHs~~V~sVAFSP~DGslLASAG 2338 (2389)
...|.-+++..++. ...+.+. .+ ..|. ...++|.| ||.+.++.|
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~p-dG~Lyv~~G 148 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDG-KGYLFIALG 148 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECS-SSEEEEEEC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECC-CCcEEEEEC
Confidence 23455566543210 0001111 11 1232 35799999 999888865
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=82.95 E-value=11 Score=45.95 Aligned_cols=143 Identities=10% Similarity=-0.030 Sum_probs=83.5
Q ss_pred EEEcCCCC-eEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCC-CCCEEEEEE---CCCCCEEEEEe---------
Q 000080 2225 FSSHPLRP-FFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYA-LASISALQF---DHYGHRFASAA--------- 2290 (2389)
Q Consensus 2225 VAFsPdG~-~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH-~~~V~sVaF---SPDG~~LASgS--------- 2290 (2389)
++|++... +++|.-..++|..||...+....+ . +++-. .+|. ...+..|.+ .|+|+.+++..
T Consensus 18 ~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~-~~~~s--~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 18 TIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-V-IDGAS--SNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-C-CTTTC--CSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred ccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-e-cCCcc--ccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 48998555 555544899999999876654433 2 22200 0011 123688999 79988888644
Q ss_pred ----CCCcEEEeeCC---CCCccCcccceeeeec----------C-CCeeEEEEecCCCCEEEEeecCCCC-CeEEEeeC
Q 000080 2291 ----LDGTVCTWQLE---VGGRSNVRPMESCLCF----------S-SHAMDVSYITSSGSVIAAAGHSSNG-INVVVWDT 2351 (2389)
Q Consensus 2291 ----~DgTVkLWDl~---tggrs~~k~l~tl~gH----------s-~~V~sVAFSP~DGslLASAG~sS~D-~TVrLWD~ 2351 (2389)
.++.|..+|+. ++.. .....+... . ..+++++..+ +|+..++.. .. +. ||.+
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~---~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s---~~~~~--I~rV 164 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKP---VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFA---LGMPA--IARV 164 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCC---SEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEE---ESSCE--EEEE
T ss_pred cccCCCCEEEEEcCCcCCCCCE---EEEecCccccccccccccccccCCceeEECC-CCCEEEeCC---CCCCe--EEEE
Confidence 37889999999 7631 111222211 1 2488999999 999998864 33 33 4443
Q ss_pred CCCCCCceEEEE-ee-----cCcEEEEeecccchhh
Q 000080 2352 LAPPTSSRASIT-CH-----EGLYDLFLPLKLLNFA 2381 (2389)
Q Consensus 2352 l~~tg~~v~sL~-GH-----~~~V~svA~~~~~~~~ 2381 (2389)
. +.++.+..+. .. .-+.+-++++|+|+..
T Consensus 165 ~-pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~L 199 (334)
T 2p9w_A 165 S-ADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKL 199 (334)
T ss_dssp C-TTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEE
T ss_pred e-CCCCEEeeeeecCCCcccccCcceEEEeCCCCEE
Confidence 2 3444333321 11 1124467778777654
No 279
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=82.67 E-value=24 Score=44.54 Aligned_cols=144 Identities=11% Similarity=-0.007 Sum_probs=85.2
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCC
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEV 2302 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~t 2302 (2389)
|......+|..++.+ .|+.||.=++..+..-+.+.. |.+- ....|+.+..||+|++||..+. .+|.+-.+-.
T Consensus 24 R~~~~~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~-~~~i-----~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~ 95 (452)
T 3pbp_A 24 RYIFSSQNGTRIVFI-QDNIIRWYNVLTDSLYHSLNF-SRHL-----VLDDTFHVISSTSGDLLCLFND-NEIFVMEVPW 95 (452)
T ss_dssp EEEEEETTTTEEEEE-ETTEEEEEETTTCSSCEEEEC-TTTC-----CCCTTCEEEECTTSSEEEEECS-SEEEEEECCT
T ss_pred cEEEEEcCCCEEEEE-ECCEEEEEECCCCCcceEEec-Cccc-----ccCceeEEEECCCCCEEEEecC-CeEEEEEecC
Confidence 455566677766664 568899988875543344431 1100 1135889999999999999854 6899988874
Q ss_pred CCccCccc--------ceeeee------cCCCeeEEEEecC--CCCEEEEeecCCCCCeEEEeeCCCCCCCce------E
Q 000080 2303 GGRSNVRP--------MESCLC------FSSHAMDVSYITS--SGSVIAAAGHSSNGINVVVWDTLAPPTSSR------A 2360 (2389)
Q Consensus 2303 ggrs~~k~--------l~tl~g------Hs~~V~sVAFSP~--DGslLASAG~sS~D~TVrLWD~l~~tg~~v------~ 2360 (2389)
+.. .... .+++.- .+..|..|-|+|- .|..|++- .+|++||+||+........ .
T Consensus 96 ~~~-~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL---tsD~~Ir~yDl~~s~~~P~~L~k~~~ 171 (452)
T 3pbp_A 96 GYS-NVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL---KEDDTITMFDILNSQEKPIVLNKPNN 171 (452)
T ss_dssp TCS-CCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE---ETTSCEEEEETTCTTSCCEEESCCCS
T ss_pred ccc-cCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE---ecCCEEEEEEcccCCCCCcchhcccc
Confidence 310 0010 011111 2467999999984 23345443 3899999999853221112 1
Q ss_pred --EEEeecCcEEEEeecccc
Q 000080 2361 --SITCHEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2361 --sL~GH~~~V~svA~~~~~ 2378 (2389)
.+..+...|.+++|..+|
T Consensus 172 ~fg~d~~~~ev~S~~Fg~~~ 191 (452)
T 3pbp_A 172 SFGLDARVNDITDLEFSKDG 191 (452)
T ss_dssp EEESCSSCCCEEEEEECTTS
T ss_pred ccCCCcccceEEEEEEcCCC
Confidence 112233567777777643
No 280
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=81.33 E-value=13 Score=45.31 Aligned_cols=111 Identities=10% Similarity=0.118 Sum_probs=66.7
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCC----CCEEEEEe--CCCcEE
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHY----GHRFASAA--LDGTVC 2296 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD----G~~LASgS--~DgTVk 2296 (2389)
+.|+|.|||.++++--..|.|++++..+|+... +..++. + ..........|+|+|| |...++=+ .++.|-
T Consensus 35 ~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~-v~~~~~--v-~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 35 WGLAPLPGGDLLVSSRDEATITRVDAKTGRKTE-LGEVPG--V-SPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECTT--C-CCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred eEEEEcCCCcEEEEEecCCEEEEEECCCCcEee-ecccCc--e-eecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 889999999998886668999999876665422 211110 0 0112356899999995 66666533 445555
Q ss_pred EeeCCCCC----c-cCcccce-eee-ecCCCeeEEEEecCCCCEEEEee
Q 000080 2297 TWQLEVGG----R-SNVRPME-SCL-CFSSHAMDVSYITSSGSVIAAAG 2338 (2389)
Q Consensus 2297 LWDl~tgg----r-s~~k~l~-tl~-gHs~~V~sVAFSP~DGslLASAG 2338 (2389)
-|.+..+. + ...+.+. .+. +..+....++|.| ||.+.++.|
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~G 158 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTG 158 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEEC
Confidence 56554310 0 0112222 221 1112345799999 999999876
No 281
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=81.25 E-value=29 Score=41.30 Aligned_cols=111 Identities=5% Similarity=-0.040 Sum_probs=70.1
Q ss_pred EEEEEcCC-CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCC-CEEEEEeCC-CcEEEee
Q 000080 2223 RAFSSHPL-RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYG-HRFASAALD-GTVCTWQ 2299 (2389)
Q Consensus 2223 rsVAFsPd-G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG-~~LASgS~D-gTVkLWD 2299 (2389)
..+++.+. |.++.+-+..+.|...+.. |+...++. .. ....-+.|+++|++ ..+.+-..+ +.|...+
T Consensus 119 ~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~~~~l~--~~-------~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRKVLL--WQ-------SLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEE--CT-------TCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred cEEEEecCCCeEEEEcCCCCeEEEEcCC-CCceEEEE--eC-------CCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 45689974 5667777788899999985 54444432 11 12456999999965 555555555 7788777
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeC
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDT 2351 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~ 2351 (2389)
+.... .+.+. ...-...+.++++|++|.+..+ .+..+.|...|+
T Consensus 189 ~dG~~---~~~~~--~~~~~~PnGla~d~~~~~lY~a---D~~~~~I~~~~~ 232 (349)
T 3v64_C 189 MDGSG---RRIIA--DTHLFWPNGLTIDYAGRRMYWV---DAKHHVIERANL 232 (349)
T ss_dssp TTSCS---CEESC--CSSCSCEEEEEEETTTTEEEEE---ETTTTEEEEEET
T ss_pred CCCCC---cEEEE--ECCCCCcceEEEeCCCCEEEEE---ECCCCEEEEEeC
Confidence 76321 11111 1122456789999845555554 256788999996
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=81.18 E-value=20 Score=41.79 Aligned_cols=111 Identities=10% Similarity=0.046 Sum_probs=72.3
Q ss_pred CCCCcCceeEEEEEEcCCCC-eEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC
Q 000080 2213 PPATVENISTRAFSSHPLRP-FFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL 2291 (2389)
Q Consensus 2213 ~~atv~ni~VrsVAFsPdG~-~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~ 2291 (2389)
++..+.+ .+..++++|++. +++....++.|..-|.. |+.++++. +. |. ...-.|++.++|.++++.-.
T Consensus 21 ~l~g~~~-~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~-l~-------g~-~D~EGIa~~~~g~~~vs~E~ 89 (255)
T 3qqz_A 21 EIAGITN-NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP-LD-------FV-KDLETIEYIGDNQFVISDER 89 (255)
T ss_dssp ECTTCCS-CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE-CS-------SC-SSEEEEEECSTTEEEEEETT
T ss_pred ECCCccc-CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe-cC-------CC-CChHHeEEeCCCEEEEEECC
Confidence 3444433 258999999876 45556778899999986 88777763 21 22 45889999999987676667
Q ss_pred CCcEEEeeCCCCCccCcccceee------eecCCCeeEEEEecCCCCEEEEe
Q 000080 2292 DGTVCTWQLEVGGRSNVRPMESC------LCFSSHAMDVSYITSSGSVIAAA 2337 (2389)
Q Consensus 2292 DgTVkLWDl~tggrs~~k~l~tl------~gHs~~V~sVAFSP~DGslLASA 2337 (2389)
++.+.+.++...+. ...+... ..+......+||.| +++.|.++
T Consensus 90 ~~~l~~~~v~~~~~--i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va 138 (255)
T 3qqz_A 90 DYAIYVISLTPNSE--VKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFF 138 (255)
T ss_dssp TTEEEEEEECTTCC--EEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEE
T ss_pred CCcEEEEEcCCCCe--eeeeeeeccccccccccCCcceEEEeC-CCCEEEEE
Confidence 78888888876431 0111111 12344557899999 55444444
No 283
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=80.97 E-value=24 Score=45.95 Aligned_cols=141 Identities=11% Similarity=0.023 Sum_probs=87.8
Q ss_pred cCceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEE
Q 000080 2217 VENISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVC 2296 (2389)
Q Consensus 2217 v~ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVk 2296 (2389)
+.+..|+++...++|.+.+ |+.++-|..||..+++.. .+. ... ......|.++...++|+..+ |+.++.+.
T Consensus 360 l~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~--~~~----~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~ 430 (781)
T 3v9f_A 360 LSNKVVSSVCDDGQGKLWI-GTDGGGINVFENGKRVAI-YNK--ENR----ELLSNSVLCSLKDSEGNLWF-GTYLGNIS 430 (781)
T ss_dssp CSSSCEEEEEECTTSCEEE-EEBSSCEEEEETTEEEEE-CC-----------CCCSBEEEEEECTTSCEEE-EETTEEEE
T ss_pred CCCcceEEEEEcCCCCEEE-EeCCCcEEEEECCCCeEE-Ecc--CCC----CCCCcceEEEEECCCCCEEE-EeccCCEE
Confidence 3344579999999988665 565666999997654332 221 000 12346799999999998776 56667788
Q ss_pred EeeCCCCCccCcccceeee---ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEe-e-----cC
Q 000080 2297 TWQLEVGGRSNVRPMESCL---CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITC-H-----EG 2367 (2389)
Q Consensus 2297 LWDl~tggrs~~k~l~tl~---gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~G-H-----~~ 2367 (2389)
.+|.+++. +..+. -....|++++..+ +|.+.+.+ . +-|..+|. .+++ ...+.. . .+
T Consensus 431 ~~~~~~~~------~~~~~~~~~~~~~v~~i~~d~-~g~lwigt----~-~Gl~~~~~--~~~~-~~~~~~~~~~~~~~~ 495 (781)
T 3v9f_A 431 YYNTRLKK------FQIIELEKNELLDVRVFYEDK-NKKIWIGT----H-AGVFVIDL--ASKK-VIHHYDTSNSQLLEN 495 (781)
T ss_dssp EECSSSCE------EEECCSTTTCCCCEEEEEECT-TSEEEEEE----T-TEEEEEES--SSSS-CCEEECTTTSSCSCS
T ss_pred EEcCCCCc------EEEeccCCCCCCeEEEEEECC-CCCEEEEE----C-CceEEEeC--CCCe-EEecccCcccccccc
Confidence 89887651 12221 1346789998888 78877642 3 45788885 2222 222221 1 35
Q ss_pred cEEEEeecccchhh
Q 000080 2368 LYDLFLPLKLLNFA 2381 (2389)
Q Consensus 2368 ~V~svA~~~~~~~~ 2381 (2389)
.|.+++..++|+.-
T Consensus 496 ~i~~i~~d~~g~lW 509 (781)
T 3v9f_A 496 FVRSIAQDSEGRFW 509 (781)
T ss_dssp CEEEEEECTTCCEE
T ss_pred eeEEEEEcCCCCEE
Confidence 67888887777643
No 284
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=80.96 E-value=2.7 Score=47.05 Aligned_cols=96 Identities=14% Similarity=0.253 Sum_probs=72.7
Q ss_pred CCCHHHHHHcCcEEEEeChHHHHHHHHHHHHHHHhccCCcchhHHHHHHhcchHHHHHHHhcccCCCchhHHhHhhcccC
Q 000080 1225 EPTWPEMRALGVGFWYTDVTQLRTRMEKLARLQYLKKKDPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRNFQ 1304 (2389)
Q Consensus 1225 ~~sW~~~r~~Gv~~Wl~~~~~Lr~~~EkIAr~ey~~~kDP~dcaLfYlAL~Kk~vL~gL~k~~~~~k~~~m~~FLsnDFs 1304 (2389)
...|+.+-+ ..|+..==.||..-|++.+|.....++|...|.+.-|..|-|++...
T Consensus 34 ~~~Wk~Lg~----------~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~-------------- 89 (177)
T 3mkq_B 34 SITWERLIQ----------EALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTR-------------- 89 (177)
T ss_dssp HHHHHHHHH----------HHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHT--------------
T ss_pred HHHHHHHHH----------HHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHC--------------
Confidence 345776543 34444334589999999999999999999999998888777765422
Q ss_pred hHHHHHHHHhhHHHHhhcchhHHHHHHHHhcCChhHHHHHHHHhcCChhhhhhhhhhhc
Q 000080 1305 EEKNKAAALKNAYVLLGRHQLELAIAFFLLGGDAASAVTVCARNLGDVQLALVICRLVE 1363 (2389)
Q Consensus 1305 e~RWr~AAlKNAyaLLsK~Ry~~AAAFFLLAg~lkDAV~Vc~~~L~D~qLAi~IaRLyE 1363 (2389)
.+|-.|-.-+++-|++++|+++. .+.+-+++|+++||-|-
T Consensus 90 ------------------g~~n~af~~~l~lGdv~~~i~lL-~~~~r~~eA~~~A~t~g 129 (177)
T 3mkq_B 90 ------------------EDFGSMLLNTFYNNSTKERSSIF-AEGGSLPLAYAVAKANG 129 (177)
T ss_dssp ------------------TCHHHHHHHHHHHTCHHHHHHHH-HHTTCHHHHHHHHHHTT
T ss_pred ------------------ccHHHHHHHHHHcCCHHHHHHHH-HHCCChHHHHHHHHHcC
Confidence 23344445577789999999996 56799999999999983
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=78.79 E-value=35 Score=43.52 Aligned_cols=146 Identities=9% Similarity=0.037 Sum_probs=85.0
Q ss_pred EEEEEcCC--CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEE-------CCCCCEEEEEeCCC
Q 000080 2223 RAFSSHPL--RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQF-------DHYGHRFASAALDG 2293 (2389)
Q Consensus 2223 rsVAFsPd--G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaF-------SPDG~~LASgS~Dg 2293 (2389)
..|+|+|. ++++++--..+.|++.|..++.. .++.. .. .+.....+.|+| +++|++|..+...+
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v-~~l~~--~~----~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRML-SSPLN--IN----TIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEE-EEEEC--CT----TSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEE-EEEEc--cC----ccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 66799993 66677666667899999866554 34421 11 112356899999 99999666655543
Q ss_pred -c------EEEeeCCCCCccCcc-c-ceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCC-----CCCCc-
Q 000080 2294 -T------VCTWQLEVGGRSNVR-P-MESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLA-----PPTSS- 2358 (2389)
Q Consensus 2294 -T------VkLWDl~tggrs~~k-~-l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~-----~tg~~- 2358 (2389)
. |...+-+..+. -.. + ...+... .+...++++|.+|.++++- ..++.|..+|+.. .++..
T Consensus 215 ~~~~~~~~V~~i~r~~~G~-~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd---~~~g~V~r~d~~~~~~~~~tg~~~ 289 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGT-FDDRSDIQLIAAY-KQCNGATIHPINGELYFNS---YEKGQVFRLDLVDYFKTIKNGGSW 289 (496)
T ss_dssp TTGGGEEEEEEEECCTTSC-CSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEE---TTTTEEEEECHHHHHHHHHTTCCC
T ss_pred CCcccCceEEEEecCCCCc-eeecccceeeccC-CCceEEEEcCCCCeEEEEE---CCCCEEEEEecccccccccCceee
Confidence 2 55555343111 000 0 0122222 2445788999777877764 4677899999730 02221
Q ss_pred ----------eEEEE--eecCcEEEEeecccchh
Q 000080 2359 ----------RASIT--CHEGLYDLFLPLKLLNF 2380 (2389)
Q Consensus 2359 ----------v~sL~--GH~~~V~svA~~~~~~~ 2380 (2389)
...+- +...+-..+|++|+|++
T Consensus 290 tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~ 323 (496)
T 3kya_A 290 DPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKY 323 (496)
T ss_dssp CCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSE
T ss_pred cccccccccccceeEecCCCCCceEEEEcCCCCE
Confidence 12221 12234578999999984
No 286
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=74.72 E-value=4.6 Score=52.47 Aligned_cols=82 Identities=12% Similarity=0.136 Sum_probs=54.3
Q ss_pred EeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeee
Q 000080 2237 GSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLC 2316 (2389)
Q Consensus 2237 GS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~g 2316 (2389)
...|++|+-||..+|+.+-.... + ..+....+...|.++..|+.||.|+.||.++|. .+..+.-
T Consensus 434 ~~~~g~l~A~D~~tG~~~W~~~~---~--------~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~-----~l~~~~~ 497 (668)
T 1kv9_A 434 AVVSGALLAWDPVKQKAAWKVPY---P--------THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE-----ALWQFEA 497 (668)
T ss_dssp GGCEEEEEEEETTTTEEEEEEEE---S--------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC-----EEEEEEC
T ss_pred CCccceEEEEeCCCCcEEEEccC---C--------CCCcCceeEeCCCEEEEECCcccchhhhhhcCh-----hheEecC
Confidence 34679999999999998766531 1 112334455678889999999999999999973 4444433
Q ss_pred cCC-CeeEEEEecCCCCEEE
Q 000080 2317 FSS-HAMDVSYITSSGSVIA 2335 (2389)
Q Consensus 2317 Hs~-~V~sVAFSP~DGslLA 2335 (2389)
... ...-++|.. +|++.+
T Consensus 498 ~~~~~~~p~~~~~-~G~~yv 516 (668)
T 1kv9_A 498 QSGIVAAPMTFEL-AGRQYV 516 (668)
T ss_dssp SSCCCSCCEEEEE-TTEEEE
T ss_pred CCCcccCceEEEE-CCEEEE
Confidence 322 123466766 677433
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=74.66 E-value=43 Score=44.84 Aligned_cols=138 Identities=9% Similarity=-0.034 Sum_probs=83.8
Q ss_pred EEEEEEcC-CCCeEEEEeCCCcEEEeecCCCc---eeeEecccCCCCCCCCCCCCCEEEEEECCCC-CEEEEEeCCCcEE
Q 000080 2222 TRAFSSHP-LRPFFLVGSSNTHIYLWEFGKDK---ATATYGVLPAANVPPPYALASISALQFDHYG-HRFASAALDGTVC 2296 (2389)
Q Consensus 2222 VrsVAFsP-dG~~LASGS~DgTIRLWDl~tGk---~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG-~~LASgS~DgTVk 2296 (2389)
+.+|+|++ ++.++.+-...+.|+.+++.... ...++. .. .......||+.+.| +.+.+-+..++|.
T Consensus 426 ~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi--~~-------~l~~P~GLAvD~~~~~LY~tD~~~~~I~ 496 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI--SR-------DIQAPDGLAVDWIHSNIYWTDSVLGTVS 496 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE--CS-------SCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE--ec-------CCCCcceeeeeecCCcEEEEecCCCeEE
Confidence 37899999 45677777788899999985321 112221 11 12456889999887 5666667789999
Q ss_pred EeeCCCCCccCcccceeee-ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEe-ecCcEEEEee
Q 000080 2297 TWQLEVGGRSNVRPMESCL-CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITC-HEGLYDLFLP 2374 (2389)
Q Consensus 2297 LWDl~tggrs~~k~l~tl~-gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~G-H~~~V~svA~ 2374 (2389)
+-++... ....+. ..-...++||+.|..|.+..|- . +..+.|..-++ .|..+..+.. .-..-..||.
T Consensus 497 v~~ldG~------~~~~l~~~~l~~P~gIaVDp~~g~LYwtD-~-g~~~~I~~~~~---dG~~~~~lv~~~l~~P~GLav 565 (791)
T 3m0c_C 497 VADTKGV------KRKTLFRENGSKPRAIVVDPVHGFMYWTD-W-GTPAKIKKGGL---NGVDIYSLVTENIQWPNGITL 565 (791)
T ss_dssp EEETTSS------SEEEEEECTTCCEEEEEEETTTTEEEEEE-C-SSSCEEEEEET---TSCCEEEEECSSCSCEEEEEE
T ss_pred EEeCCCC------eEEEEEeCCCCCcceEEEecCCCCEEEec-C-CCCCeEEEEec---CCCceEEEEeCCCCCceEEEE
Confidence 9998743 122222 2334578999999556666653 1 12356777775 3444444432 2245667777
Q ss_pred cccch
Q 000080 2375 LKLLN 2379 (2389)
Q Consensus 2375 ~~~~~ 2379 (2389)
.+.++
T Consensus 566 D~~~~ 570 (791)
T 3m0c_C 566 DLLSG 570 (791)
T ss_dssp ETTTT
T ss_pred ecCCC
Confidence 75544
No 288
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=74.63 E-value=52 Score=42.92 Aligned_cols=140 Identities=9% Similarity=0.006 Sum_probs=87.4
Q ss_pred ceeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEe
Q 000080 2219 NISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTW 2298 (2389)
Q Consensus 2219 ni~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLW 2298 (2389)
+..|+++...++|.+.+ |+.++-|..+|..+++.. .+.. + .-....|+++...++|+..+... +.|..+
T Consensus 406 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~-~------~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~ 474 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIEL-E------KNELLDVRVFYEDKNKKIWIGTH--AGVFVI 474 (781)
T ss_dssp CSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCS-T------TTCCCCEEEEEECTTSEEEEEET--TEEEEE
T ss_pred CcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-Eecc-C------CCCCCeEEEEEECCCCCEEEEEC--CceEEE
Confidence 34579999999998776 667667999998777643 3320 0 01236799999999998666554 568889
Q ss_pred eCCCCCccCcccceeee---ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEe----ecCcEEE
Q 000080 2299 QLEVGGRSNVRPMESCL---CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITC----HEGLYDL 2371 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~---gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~G----H~~~V~s 2371 (2389)
|.+++. ...+.... .....|.+++..+ +|++.+.+ .++-+..+|. ..+.+..+.. ..+.|.+
T Consensus 475 ~~~~~~---~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt----~~~Gl~~~~~---~~~~~~~~~~~~~l~~~~i~~ 543 (781)
T 3v9f_A 475 DLASKK---VIHHYDTSNSQLLENFVRSIAQDS-EGRFWIGT----FGGGVGIYTP---DMQLVRKFNQYEGFCSNTINQ 543 (781)
T ss_dssp ESSSSS---CCEEECTTTSSCSCSCEEEEEECT-TCCEEEEE----SSSCEEEECT---TCCEEEEECTTTTCSCSCEEE
T ss_pred eCCCCe---EEecccCcccccccceeEEEEEcC-CCCEEEEE----cCCCEEEEeC---CCCeEEEccCCCCCCCCeeEE
Confidence 988752 11111110 1146789999998 88877643 3233666774 2233333321 1346778
Q ss_pred Eeecccchh
Q 000080 2372 FLPLKLLNF 2380 (2389)
Q Consensus 2372 vA~~~~~~~ 2380 (2389)
+...++|+.
T Consensus 544 i~~d~~g~l 552 (781)
T 3v9f_A 544 IYRSSKGQM 552 (781)
T ss_dssp EEECTTSCE
T ss_pred EEECCCCCE
Confidence 888777763
No 289
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=73.98 E-value=38 Score=40.01 Aligned_cols=139 Identities=14% Similarity=-0.034 Sum_probs=83.8
Q ss_pred EEEEEEcCC-CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCC-CCEEEEEeCCCcEEEee
Q 000080 2222 TRAFSSHPL-RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHY-GHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2222 VrsVAFsPd-G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD-G~~LASgS~DgTVkLWD 2299 (2389)
..+|+|++. +.++.+-..++.|+.++...+....+... . .......+++.+. |+.+.+-...+.|.+.+
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~--~-------~l~~p~glavd~~~g~ly~~d~~~~~I~~~~ 107 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV--S-------GLLSPDGLACDWLGEKLYWTDSETNRIEVSN 107 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE--E-------CCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc--C-------CCCCccEEEEEcCCCeEEEEECCCCEEEEEE
Confidence 368899985 66777877889999999865532222110 0 0134578999985 56667767788999999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE-eecCcEEEEeecccc
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT-CHEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~-GH~~~V~svA~~~~~ 2378 (2389)
+.... .+.+ ........+++++.|..|.+..|- . ...+.|...++ .++....+. .--..-+.+|.++++
T Consensus 108 ~dG~~---~~~l--~~~~~~~P~giavdp~~g~ly~td-~-~~~~~I~r~~~---dG~~~~~~~~~~l~~Pnglavd~~~ 177 (318)
T 3sov_A 108 LDGSL---RKVL--FWQELDQPRAIALDPSSGFMYWTD-W-GEVPKIERAGM---DGSSRFIIINSEIYWPNGLTLDYEE 177 (318)
T ss_dssp TTSCS---CEEE--ECSSCSSEEEEEEEGGGTEEEEEE-C-SSSCEEEEEET---TSCSCEEEECSSCSCEEEEEEETTT
T ss_pred CCCCc---EEEE--EeCCCCCccEEEEeCCCCEEEEEe-c-CCCCEEEEEEc---CCCCeEEEEECCCCCccEEEEeccC
Confidence 87431 1111 112335568999998555555552 1 13456666665 344444442 112334577777755
Q ss_pred h
Q 000080 2379 N 2379 (2389)
Q Consensus 2379 ~ 2379 (2389)
+
T Consensus 178 ~ 178 (318)
T 3sov_A 178 Q 178 (318)
T ss_dssp T
T ss_pred C
Confidence 4
No 290
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=73.70 E-value=86 Score=36.50 Aligned_cols=121 Identities=9% Similarity=0.053 Sum_probs=74.3
Q ss_pred EEEEEcCCCC-eEEEEeCC-CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEE-EEEeCCCcEEEee
Q 000080 2223 RAFSSHPLRP-FFLVGSSN-THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRF-ASAALDGTVCTWQ 2299 (2389)
Q Consensus 2223 rsVAFsPdG~-~LASGS~D-gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~L-ASgS~DgTVkLWD 2299 (2389)
+.|+++|.+. ++.+.... +.|...+. .|+....+.. . ....-..|+++|++++| .+-+..++|...|
T Consensus 123 ~~iavdp~~g~ly~~d~~~~~~I~~~~~-dG~~~~~~~~--~-------~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d 192 (316)
T 1ijq_A 123 RAIVVDPVHGFMYWTDWGTPAKIKKGGL-NGVDIYSLVT--E-------NIQWPNGITLDLLSGRLYWVDSKLHSISSID 192 (316)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEET-TSCCEEEEEC--S-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ceEEeCCCCCEEEEEccCCCCeEEEEcC-CCCCeEEEEE--C-------CCCCceEEEEeccCCEEEEEECCCCeEEEEe
Confidence 7889999655 45554443 68888887 4655444421 1 12457899999987655 4545667999999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT 2363 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~ 2363 (2389)
+... ..+.+....+.-.....+++. .|.++.+. ...+.|...|. .+++.+..+.
T Consensus 193 ~dg~---~~~~~~~~~~~~~~P~giav~--~~~ly~~d---~~~~~V~~~~~--~~g~~~~~i~ 246 (316)
T 1ijq_A 193 VNGG---NRKTILEDEKRLAHPFSLAVF--EDKVFWTD---IINEAIFSANR--LTGSDVNLLA 246 (316)
T ss_dssp TTSC---SCEEEEECTTTTSSEEEEEEE--TTEEEEEE---TTTTEEEEEET--TTCCCCEEEE
T ss_pred cCCC---ceEEEeecCCccCCcEEEEEE--CCEEEEEE---CCCCeEEEEeC--CCCcceEEEe
Confidence 8742 212332211123455678885 45666664 46678888885 2455555554
No 291
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=73.17 E-value=5.1 Score=51.36 Aligned_cols=81 Identities=10% Similarity=0.030 Sum_probs=51.2
Q ss_pred CCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecC
Q 000080 2239 SNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFS 2318 (2389)
Q Consensus 2239 ~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs 2318 (2389)
.+++|+-||..+|+.+-.... .. | ..... ....|.++..|+.||.++.+|.++|+ .+..+....
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~-~~---~--~~~g~-----~~tagglvf~g~~dg~l~A~D~~tG~-----~lW~~~~~~ 527 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKE-HL---P--LWAGV-----LATAGNLVFTGTGDGYFKAFDAKSGK-----ELWKFQTGS 527 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEE-SS---C--CCSCC-----EEETTTEEEEECTTSEEEEEETTTCC-----EEEEEECSS
T ss_pred CcceEEEEECCCCCEEEEecC-CC---C--Ccccc-----eEeCCCEEEEECCCCcEEEEECCCCC-----EEEEecCCC
Confidence 579999999999998765531 10 1 11111 22246677779999999999999983 444443322
Q ss_pred C-CeeEEEEecCCCC-EEEE
Q 000080 2319 S-HAMDVSYITSSGS-VIAA 2336 (2389)
Q Consensus 2319 ~-~V~sVAFSP~DGs-lLAS 2336 (2389)
. ...-++|.. +|+ ++++
T Consensus 528 g~~a~P~~y~~-~G~qYv~~ 546 (582)
T 1flg_A 528 GIVSPPITWEQ-DGEQYLGV 546 (582)
T ss_dssp CCCSCCEEEEE-TTEEEEEE
T ss_pred CcccCceEEEE-CCEEEEEE
Confidence 2 222377877 777 4443
No 292
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=72.16 E-value=23 Score=45.91 Aligned_cols=122 Identities=8% Similarity=-0.033 Sum_probs=73.7
Q ss_pred CCC---CeEEEEeCCCcEEEeecCCCceeeEecccCC----------CCC--------C-------------CCCCCCCE
Q 000080 2229 PLR---PFFLVGSSNTHIYLWEFGKDKATATYGVLPA----------ANV--------P-------------PPYALASI 2274 (2389)
Q Consensus 2229 PdG---~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~g----------h~~--------p-------------~~GH~~~V 2274 (2389)
.+| +.++.++.+|.+++.|..+|+.+......+. ... | ..|| + =
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~-~-w 395 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYH-N-Q 395 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSS-C-S
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCccccc-C-C
Confidence 678 5788899999999999999998765531110 000 0 0011 1 1
Q ss_pred EEEEECCCCCEEEEEe---------------------------------------CCCcEEEeeCCCCCccCcccceeee
Q 000080 2275 SALQFDHYGHRFASAA---------------------------------------LDGTVCTWQLEVGGRSNVRPMESCL 2315 (2389)
Q Consensus 2275 ~sVaFSPDG~~LASgS---------------------------------------~DgTVkLWDl~tggrs~~k~l~tl~ 2315 (2389)
..++|+|+.+++.... .+|.|.-||+.+|. .+.+..
T Consensus 396 ~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~-----~~W~~~ 470 (599)
T 1w6s_A 396 GHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGD-----YKWEKM 470 (599)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCC-----EEEEEE
T ss_pred CCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCC-----EEeEec
Confidence 2567888876664431 35789999999973 333322
Q ss_pred ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEe
Q 000080 2316 CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITC 2364 (2389)
Q Consensus 2316 gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~G 2364 (2389)
+...+.+-.... .|.++..+ +.|+.++.+|. .+++.+.+++-
T Consensus 471 -~~~~~~~g~~~t-agg~vf~g---t~dg~l~A~D~--~tG~~lW~~~l 512 (599)
T 1w6s_A 471 -ERFAVWGGTMAT-AGDLVFYG---TLDGYLKARDS--DTGDLLWKFKI 512 (599)
T ss_dssp -ESSCCCSBCEEE-TTTEEEEE---CTTSEEEEEET--TTCCEEEEEEC
T ss_pred -CCCCccCcceEe-cCCEEEEE---CCCCeEEEEEC--CCCCEEEEeeC
Confidence 111122112333 34555554 58999999997 57888877653
No 293
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=71.83 E-value=64 Score=39.34 Aligned_cols=141 Identities=10% Similarity=0.060 Sum_probs=80.6
Q ss_pred EEEEEcC--CCC--eEEEEeC--CCcEEEeecCCCceeeE-ecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC---C
Q 000080 2223 RAFSSHP--LRP--FFLVGSS--NTHIYLWEFGKDKATAT-YGVLPAANVPPPYALASISALQFDHYGHRFASAAL---D 2292 (2389)
Q Consensus 2223 rsVAFsP--dG~--~LASGS~--DgTIRLWDl~tGk~l~T-l~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~---D 2292 (2389)
..|++.+ +|. +++.-.. +.+|.+|++..+....+ +..+.+. .......+++.|+|++.++... |
T Consensus 115 hGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~------~~~~pND~~v~~~G~fyvt~~~~ftd 188 (355)
T 3sre_A 115 HGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK------LLPSVNDIVAVGPEHFYATNDHYFID 188 (355)
T ss_dssp EEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCT------TCSSEEEEEEEETTEEEEEESCSCSS
T ss_pred eeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccC------CCCCCceEEEeCCCCEEecCCcEeCC
Confidence 4445555 454 4444333 67899998876432212 2111221 1367899999999999998762 1
Q ss_pred ------------CcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc--
Q 000080 2293 ------------GTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS-- 2358 (2389)
Q Consensus 2293 ------------gTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~-- 2358 (2389)
.+=+||-+..+. ...+...-...+.++|+| ||+.|..+- +..+.|..+|+. +.++.
T Consensus 189 ~~~~~~e~~~~~~~g~vyr~d~~~------~~~~~~~l~~pNGia~sp-Dg~~lYvad--t~~~~I~~~~~~-~~g~l~~ 258 (355)
T 3sre_A 189 PYLKSWEMHLGLAWSFVTYYSPND------VRVVAEGFDFANGINISP-DGKYVYIAE--LLAHKIHVYEKH-ANWTLTP 258 (355)
T ss_dssp HHHHHHHHHTTCCCEEEEEECTTC------CEEEEEEESSEEEEEECT-TSSEEEEEE--GGGTEEEEEEEC-TTSCEEE
T ss_pred cccccchhhccCCccEEEEEECCe------EEEeecCCcccCcceECC-CCCEEEEEe--CCCCeEEEEEEC-CCCcEec
Confidence 233455444321 112222224678999999 888776653 567899999974 33332
Q ss_pred eEEEEeecCcEEEEeecc-cchh
Q 000080 2359 RASITCHEGLYDLFLPLK-LLNF 2380 (2389)
Q Consensus 2359 v~sL~GH~~~V~svA~~~-~~~~ 2380 (2389)
.+.+ .-.+....++..+ +|+.
T Consensus 259 ~~~~-~~~g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 259 LRVL-SFDTLVDNISVDPVTGDL 280 (355)
T ss_dssp EEEE-ECSSEEEEEEECTTTCCE
T ss_pred CEEE-eCCCCCceEEEeCCCCcE
Confidence 2233 2234445667776 4764
No 294
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=70.84 E-value=1.2e+02 Score=36.82 Aligned_cols=110 Identities=7% Similarity=-0.142 Sum_probs=71.0
Q ss_pred EEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe-C-CCcEEEee
Q 000080 2223 RAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA-L-DGTVCTWQ 2299 (2389)
Q Consensus 2223 rsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS-~-DgTVkLWD 2299 (2389)
..|++.+ .+.++++-+..+.|.+.|.. |+...++.. . .....+.|+++|.+.+|.-+. . .+.|...+
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~-g~~~~~l~~--~-------~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~ 231 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLFR--E-------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 231 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTT-TCSEEEEEE--C-------SSCCEEEEEEETTTTEEEEEECSSSCCEEEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCC-CCceEEEEe--C-------CCCCcceEEEecccCeEEEEeCCCCCEEEEEe
Confidence 6789998 66677887888999999985 544444321 1 124579999999765555444 3 36787777
Q ss_pred CCCCCccCcccceee-eecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeC
Q 000080 2300 LEVGGRSNVRPMESC-LCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDT 2351 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl-~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~ 2351 (2389)
+.... ...+ ...-...+.++++| ++..|--+ ++..+.|+..|+
T Consensus 232 ~dG~~------~~~~~~~~l~~P~glavd~-~~~~lY~a--D~~~~~I~~~d~ 275 (400)
T 3p5b_L 232 LNGVD------IYSLVTENIQWPNGITLDL-LSGRLYWV--DSKLHSISSIDV 275 (400)
T ss_dssp TTSCS------CEEEECSSCSCEEEEEEET-TTTEEEEE--ETTTTEEEEEET
T ss_pred CCCCc------cEEEEECCCCceEEEEEEe-CCCEEEEE--ECCCCEEEEEeC
Confidence 76321 1122 12224678899998 44444443 356788999986
No 295
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=68.77 E-value=1.4e+02 Score=35.29 Aligned_cols=110 Identities=5% Similarity=-0.114 Sum_probs=69.1
Q ss_pred EEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC--CCcEEEee
Q 000080 2223 RAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL--DGTVCTWQ 2299 (2389)
Q Consensus 2223 rsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~--DgTVkLWD 2299 (2389)
..+++.+ +|.++.+-+..+.|.+.+.. |+...++. .. ....-+.|++.|.+..|.-+.. .+.|...+
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~~~~l~--~~-------~~~~P~giavdp~~g~ly~td~~~~~~I~r~~ 151 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLD-GSLRKVLF--WQ-------ELDQPRAIALDPSSGFMYWTDWGEVPKIERAG 151 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEE--CS-------SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEE
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECC-CCcEEEEE--eC-------CCCCccEEEEeCCCCEEEEEecCCCCEEEEEE
Confidence 4568987 56677777788899999984 55444442 11 1245689999997655555553 46677777
Q ss_pred CCCCCccCcccceeee-ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeC
Q 000080 2300 LEVGGRSNVRPMESCL-CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDT 2351 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~-gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~ 2351 (2389)
+.-. . ...+. .--..-+.++++|++|++..+ ++..+.|...|+
T Consensus 152 ~dG~---~---~~~~~~~~l~~Pnglavd~~~~~lY~a---D~~~~~I~~~d~ 195 (318)
T 3sov_A 152 MDGS---S---RFIIINSEIYWPNGLTLDYEEQKLYWA---DAKLNFIHKSNL 195 (318)
T ss_dssp TTSC---S---CEEEECSSCSCEEEEEEETTTTEEEEE---ETTTTEEEEEET
T ss_pred cCCC---C---eEEEEECCCCCccEEEEeccCCEEEEE---ECCCCEEEEEcC
Confidence 6521 1 11221 112456789999944444444 357788999997
No 296
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=67.15 E-value=19 Score=43.20 Aligned_cols=106 Identities=16% Similarity=0.219 Sum_probs=56.7
Q ss_pred EEEEEcCC----CCeEEEEeC---C----CcEEEeecCCC--ce--eeE-ecccCCCCCCCCCCCCCEEEEEECCCCCEE
Q 000080 2223 RAFSSHPL----RPFFLVGSS---N----THIYLWEFGKD--KA--TAT-YGVLPAANVPPPYALASISALQFDHYGHRF 2286 (2389)
Q Consensus 2223 rsVAFsPd----G~~LASGS~---D----gTIRLWDl~tG--k~--l~T-l~vl~gh~~p~~GH~~~V~sVaFSPDG~~L 2286 (2389)
..|+|+|+ |.++++-+. + ..|.-|+...+ .. .++ +..++.. ..| .-..++|.|||+.+
T Consensus 76 ~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~----~~h--~~~~l~~~pDG~Ly 149 (354)
T 3a9g_A 76 LGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGA----YIH--NGGRIRFGPDGMLY 149 (354)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECC----SSC--CCCCEEECTTSCEE
T ss_pred eeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCC----CCc--CCceEEECCCCcEE
Confidence 56799997 666666543 3 56777877544 11 111 2212211 123 34679999999988
Q ss_pred EEEeCCCcE-----------EEeeCCCCCc---cCc---ccceeeeecCCCeeEEEEecCCCCEEEE
Q 000080 2287 ASAALDGTV-----------CTWQLEVGGR---SNV---RPMESCLCFSSHAMDVSYITSSGSVIAA 2336 (2389)
Q Consensus 2287 ASgS~DgTV-----------kLWDl~tggr---s~~---k~l~tl~gHs~~V~sVAFSP~DGslLAS 2336 (2389)
++.+..+.. +|+.+...+. .++ ..+. ..||.. ...++|.|.+|++.++
T Consensus 150 vt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 150 ITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIW-SYGHRN-PQGIDWHRASGVMVAT 214 (354)
T ss_dssp EECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEE-EECCSC-CCEEEECTTTCCEEEE
T ss_pred EEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEE-EEccCC-cceEEEeCCCCCEEEE
Confidence 875432111 3444333221 000 0122 234543 4679999977888775
No 297
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=65.91 E-value=23 Score=45.50 Aligned_cols=70 Identities=11% Similarity=0.216 Sum_probs=50.5
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEeeCCCCCccCcccceee-eecCCCeeEEEEecCCCCEEEEeecCCC
Q 000080 2276 ALQFDH-YGHRFASAALDG-----------TVCTWQLEVGGRSNVRPMESC-LCFSSHAMDVSYITSSGSVIAAAGHSSN 2342 (2389)
Q Consensus 2276 sVaFSP-DG~~LASgS~Dg-----------TVkLWDl~tggrs~~k~l~tl-~gHs~~V~sVAFSP~DGslLASAG~sS~ 2342 (2389)
++++.| +|+.++.|+.++ .+.+||+.++.- ..+..+ ..+...+.++++.+ +|++++.||. .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w---~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~--~ 263 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV---SDRTVTVTKHDMFCPGISMDG-NGQIVVTGGN--D 263 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCB---CCCEEEECSCCCSSCEEEECT-TSCEEEECSS--S
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcE---EeCcccCCCCCCccccccCCC-CCCEEEeCCC--C
Confidence 567778 999999998654 688999998631 222222 22445566788888 8999999873 5
Q ss_pred CCeEEEeeC
Q 000080 2343 GINVVVWDT 2351 (2389)
Q Consensus 2343 D~TVrLWD~ 2351 (2389)
+.++++||.
T Consensus 264 ~~~v~~yd~ 272 (656)
T 1k3i_A 264 AKKTSLYDS 272 (656)
T ss_dssp TTCEEEEEG
T ss_pred CCceEEecC
Confidence 568999996
No 298
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=65.84 E-value=97 Score=37.31 Aligned_cols=120 Identities=13% Similarity=0.098 Sum_probs=74.6
Q ss_pred EEEEEcCCCC-eEEEEeCC-CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCE-EEEEeCCCcEEEee
Q 000080 2223 RAFSSHPLRP-FFLVGSSN-THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHR-FASAALDGTVCTWQ 2299 (2389)
Q Consensus 2223 rsVAFsPdG~-~LASGS~D-gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~-LASgS~DgTVkLWD 2299 (2389)
+.|+++|.+. ++.+-..+ +.|+..+. .|+...++. .. ....-..|+|+|++++ +.+=+..++|...|
T Consensus 205 ~giavdp~~g~ly~td~~~~~~I~r~~~-dG~~~~~~~--~~-------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 205 RAIALHPMEGTIYWTDWGNTPRIEASSM-DGSGRRIIA--DT-------HLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEET-TSCSCEEEE--CS-------SCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred cEEEEEcCCCeEEEeccCCCCEEEEEeC-CCCCcEEEE--EC-------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 7889998655 55555555 78888887 455444442 11 1245689999987654 45555668899998
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEe
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITC 2364 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~G 2364 (2389)
+.... .+.+ ..........+++. .+.++.+. ...+.|...|. .+++.++.+..
T Consensus 275 ~dG~~---~~~~--~~~~~~~P~giav~--~~~ly~td---~~~~~V~~~~~--~~G~~~~~i~~ 327 (386)
T 3v65_B 275 LDGSH---RKAV--ISQGLPHPFAITVF--EDSLYWTD---WHTKSINSANK--FTGKNQEIIRN 327 (386)
T ss_dssp TTSCS---CEEE--ECSSCSSEEEEEEE--TTEEEEEE---TTTTEEEEEET--TTCCSCEEEEC
T ss_pred CCCCe---eEEE--EECCCCCceEEEEE--CCEEEEee---CCCCeEEEEEC--CCCcceEEEcc
Confidence 86431 1222 22223456788884 45666663 46678888884 35666666654
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=64.89 E-value=18 Score=43.14 Aligned_cols=109 Identities=12% Similarity=0.163 Sum_probs=57.6
Q ss_pred EEEEEcCC----CCeEEEEeCC-----CcEEEeecCCCce---eeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe
Q 000080 2223 RAFSSHPL----RPFFLVGSSN-----THIYLWEFGKDKA---TATYGVLPAANVPPPYALASISALQFDHYGHRFASAA 2290 (2389)
Q Consensus 2223 rsVAFsPd----G~~LASGS~D-----gTIRLWDl~tGk~---l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS 2290 (2389)
..|+|+|+ +.++++-+.+ +.|..++...++. ...+..++.+. ...|. -..++|+|||+.+++.+
T Consensus 78 ~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~--~~~h~--~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 78 LGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARP--HGLHS--GGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCT--TCCCC--CCCEEECTTSCEEEECC
T ss_pred eeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCC--CCCcC--CceEEECCCCCEEEEEC
Confidence 67799998 5566665543 6788888764421 11122123100 01232 36899999998877754
Q ss_pred CC-------------CcEEEeeCCCCC-ccC-------cccceeeeecCCCeeEEEEecCCCCEEEE
Q 000080 2291 LD-------------GTVCTWQLEVGG-RSN-------VRPMESCLCFSSHAMDVSYITSSGSVIAA 2336 (2389)
Q Consensus 2291 ~D-------------gTVkLWDl~tgg-rs~-------~k~l~tl~gHs~~V~sVAFSP~DGslLAS 2336 (2389)
.. |.|.-.|....- ..+ .....-..||. ....++|.|++|++.++
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~ 219 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSS 219 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEE
T ss_pred CCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEE
Confidence 32 344444443200 000 01111122443 25678999967787775
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=64.04 E-value=1.4e+02 Score=38.80 Aligned_cols=137 Identities=9% Similarity=-0.068 Sum_probs=84.4
Q ss_pred EEEEEcCC-CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCC-CEEEEEeCCCcEEEeeC
Q 000080 2223 RAFSSHPL-RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYG-HRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2223 rsVAFsPd-G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG-~~LASgS~DgTVkLWDl 2300 (2389)
.+|+|++. +.++.+-..++.|+-+++. |..+.++. .. | ......||+.+.+ +.+.+-...++|.+-++
T Consensus 40 ~~l~~d~~~~~lywtD~~~~~I~r~~~~-g~~~~~v~--~~------g-~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~ 109 (628)
T 4a0p_A 40 SALDFDVTDNRIYWTDISLKTISRAFMN-GSALEHVV--EF------G-LDYPEGMAVDWLGKNLYWADTGTNRIEVSKL 109 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEE--CS------S-CSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEECC-CCCcEEEE--eC------C-CCCcceEEEEeCCCEEEEEECCCCEEEEEec
Confidence 78999996 5566777788999999985 44333332 11 1 1346789999875 45566666788888888
Q ss_pred CCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecccch
Q 000080 2301 EVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLKLLN 2379 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~~~~ 2379 (2389)
.... .+.+. ...-...+++++.|..|.+..|- . +....|...++ .+..+..+...-..-..|+.+++++
T Consensus 110 dG~~---~~~l~--~~~l~~P~~iavdp~~G~lY~tD-~-g~~~~I~r~~~---dG~~~~~l~~~~~~P~GlalD~~~~ 178 (628)
T 4a0p_A 110 DGQH---RQVLV--WKDLDSPRALALDPAEGFMYWTE-W-GGKPKIDRAAM---DGSERTTLVPNVGRANGLTIDYAKR 178 (628)
T ss_dssp TSTT---CEEEE--CSSCCCEEEEEEETTTTEEEEEE-C-SSSCEEEEEET---TSCSCEEEECSCSSEEEEEEETTTT
T ss_pred CCCc---EEEEE--eCCCCCcccEEEccCCCeEEEeC-C-CCCCEEEEEeC---CCCceEEEECCCCCcceEEEccccC
Confidence 6431 11111 12234568999999677777663 1 12455666665 3444555543444556777777644
No 301
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=63.99 E-value=50 Score=40.27 Aligned_cols=101 Identities=8% Similarity=0.115 Sum_probs=61.6
Q ss_pred EEEEEEcCCCCeEEEEeC-----------------CCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCC
Q 000080 2222 TRAFSSHPLRPFFLVGSS-----------------NTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGH 2284 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~-----------------DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~ 2284 (2389)
...+++.|+|.++++... .|.|.-+|. ++....... ...-+.|+|||||+
T Consensus 167 pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~-----------l~~pNGia~spDg~ 233 (355)
T 3sre_A 167 VNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEG-----------FDFANGINISPDGK 233 (355)
T ss_dssp EEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEE-----------ESSEEEEEECTTSS
T ss_pred CceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecC-----------CcccCcceECCCCC
Confidence 367899999999998651 234444443 433222211 13458899999997
Q ss_pred EEEEE-eCCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEee
Q 000080 2285 RFASA-ALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAG 2338 (2389)
Q Consensus 2285 ~LASg-S~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG 2338 (2389)
+|-.+ +..++|..+|+...+. +...+.+ ...+....++..+.+|.+.++++
T Consensus 234 ~lYvadt~~~~I~~~~~~~~g~--l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 234 YVYIAELLAHKIHVYEKHANWT--LTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEEEGGGTEEEEEEECTTSC--EEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCc--EecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 66555 4678999999864321 1122222 22455567888873388877653
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=62.94 E-value=56 Score=41.71 Aligned_cols=115 Identities=11% Similarity=0.108 Sum_probs=69.0
Q ss_pred EEEEEE-------cCCCCeEEEEeCCC-------cEEEeecCC-Ccee-----eEecccCCCCCCCCCCCCCEEEEEECC
Q 000080 2222 TRAFSS-------HPLRPFFLVGSSNT-------HIYLWEFGK-DKAT-----ATYGVLPAANVPPPYALASISALQFDH 2281 (2389)
Q Consensus 2222 VrsVAF-------sPdG~~LASGS~Dg-------TIRLWDl~t-Gk~l-----~Tl~vl~gh~~p~~GH~~~V~sVaFSP 2281 (2389)
.+.|+| +++|..|..+...+ .|.+.+... |+.. +++.. . ..-..++++|
T Consensus 188 p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~---~--------~~p~giavdp 256 (496)
T 3kya_A 188 IRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA---Y--------KQCNGATIHP 256 (496)
T ss_dssp EEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE---E--------SCCCCEEECT
T ss_pred CcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc---C--------CCceEEEEcC
Confidence 488999 99999555544433 366776433 2221 12211 0 1135778999
Q ss_pred -CCCEEEEEeCCCcEEEeeCC-------CCCccC---------cccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCC
Q 000080 2282 -YGHRFASAALDGTVCTWQLE-------VGGRSN---------VRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGI 2344 (2389)
Q Consensus 2282 -DG~~LASgS~DgTVkLWDl~-------tggrs~---------~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~ 2344 (2389)
+|..+++-..++.|..+|+. ++.... .+.+.+. +-...-+.++|+| +|+.|-.+ .+..+
T Consensus 257 ~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p-~G~~lYva--D~~~h 332 (496)
T 3kya_A 257 INGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHP-TGKYAYFG--VINNH 332 (496)
T ss_dssp TTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECT-TSSEEEEE--ETTTT
T ss_pred CCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcC-CCCEEEEE--eCCCC
Confidence 56778888889999999997 542000 0012222 2234457899999 89843333 25778
Q ss_pred eEEEeeC
Q 000080 2345 NVVVWDT 2351 (2389)
Q Consensus 2345 TVrLWD~ 2351 (2389)
.|+.+|.
T Consensus 333 ~I~kid~ 339 (496)
T 3kya_A 333 YFMRSDY 339 (496)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8988765
No 303
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=62.73 E-value=18 Score=45.69 Aligned_cols=84 Identities=10% Similarity=0.119 Sum_probs=54.0
Q ss_pred CCcceeecCCCCCCeEEEEecCCcEEEEeCCCCccccc--ccccccceeeeecc----CCCCCeeEEEEcCCCCCCCcEE
Q 000080 40 STSTIDWLPDFAGYSWVAYGASSLLVISHFPSPLSQEE--ALIGPIFRQVFALS----DNSLPVTSISWSPETPSIGQLA 113 (2389)
Q Consensus 40 ~~~ai~wlpD~~G~~~vAYasg~~vVI~~l~SP~~~~e--~~~~p~~~Qviegh----~d~~dVk~VaWSPd~~~~GeIa 113 (2389)
+..++.-+|+ | .++|......|.|..||.+...-. ...+|+=...+... ....+|+.|.|||-...+..|+
T Consensus 67 ~i~qlvlSps--G-~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LV 143 (452)
T 3pbp_A 67 DTFHVISSTS--G-DLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIV 143 (452)
T ss_dssp TTCEEEECTT--S-SEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEE
T ss_pred ceeEEEECCC--C-CEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEE
Confidence 4455777787 8 699999999999999996432211 10122222222221 1125899999999744445677
Q ss_pred E-ecCCeEEEEeeC
Q 000080 114 A-ASENCIFVFAHD 126 (2389)
Q Consensus 114 A-SyDntIRVw~~d 126 (2389)
+ -.|++||+|.-.
T Consensus 144 VLtsD~~Ir~yDl~ 157 (452)
T 3pbp_A 144 VLKEDDTITMFDIL 157 (452)
T ss_dssp EEETTSCEEEEETT
T ss_pred EEecCCEEEEEEcc
Confidence 6 568999999865
No 304
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=60.90 E-value=39 Score=47.17 Aligned_cols=64 Identities=11% Similarity=0.057 Sum_probs=37.9
Q ss_pred CCcEEEecCCeEEEEeeCCCCCCCCccceeeEEecccceEEEEe-ecCCC---CeEEEEecc----eEEeeccCCcEE
Q 000080 109 IGQLAAASENCIFVFAHDSASSKGSFCWSQNAILVQGTKVEAIE-WTGSG---DGIVAGGME----TVLWKKKNTLWE 178 (2389)
Q Consensus 109 ~GeIaASyDntIRVw~~d~~~~kgd~~W~~~~tL~hssTV~sIA-WSpdG---~rLaSggdD----V~IW~~~~s~We 178 (2389)
..+|+.+-.+.+-||..++ + .=.+......-++|.+|+ +.|.| ++|+-++++ +.=|+.....-+
T Consensus 46 ~~~Lvvak~~~Lel~~~~~----~--~L~~v~~~~l~G~I~~l~~~r~~g~~~D~L~v~td~~~~~il~~d~~~~~~~ 117 (1158)
T 3ei3_A 46 DLNLLIAKNTRLEIYVVTA----E--GLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESID 117 (1158)
T ss_dssp CCEEEEEETTEEEEEEEET----T--EEEEEEEEECSSCEEEEEEECCTTCSSCEEEEEETTCEEEEEEEEC-CCCCE
T ss_pred ccEEEEecCCEEEEEEEcc----c--ceEEEEEEEcccEEEEEEEEcCCCCCceEEEEEeCCceEEEEEEcCCCCcee
Confidence 5678888889999999873 1 122233334566777743 44544 578877776 334654433333
No 305
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=60.55 E-value=63 Score=37.81 Aligned_cols=121 Identities=12% Similarity=0.095 Sum_probs=65.8
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCC
Q 000080 2223 RAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEV 2302 (2389)
Q Consensus 2223 rsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~t 2302 (2389)
.++.|.|+|.+.++ .||.|+-|+-.+...-.-+.. +..+. .+--..+..|.|.|+|...|.. |+.+.=+---+
T Consensus 91 ~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~--a~~vg-~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~ 163 (236)
T 1tl2_A 91 QFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIAR--ATEVG-SGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPV 163 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH--SEEEE-CSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCS
T ss_pred eEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceecc--ccEec-cCCCCceEEEEECCCceEEEEe--CCcEEecCCCC
Confidence 57799999999998 669998888533211100000 00000 0012568999999999999999 67653332221
Q ss_pred CCccCcccceeeeecC--CCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCc
Q 000080 2303 GGRSNVRPMESCLCFS--SHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSS 2358 (2389)
Q Consensus 2303 ggrs~~k~l~tl~gHs--~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~ 2358 (2389)
++.+.--...+..++. ..-+-+.|.| +|.+.+.. ++ +||....++..+
T Consensus 164 ~~~~~wl~~~~~~g~~g~~~yr~l~f~~-~G~l~~v~-----~g--~~Y~~~~p~~~~ 213 (236)
T 1tl2_A 164 SNQDNWLARATKIGQGGWDTFKFLFFSS-VGTLFGVQ-----GG--KFYEDYPPSYAY 213 (236)
T ss_dssp STTCCHHHHCEEEESSSGGGEEEEEECT-TSCEEEEE-----TT--EEEEESCCCSTT
T ss_pred CCCcccccccceeccCCcceEEEEEECC-CCcEEEEe-----CC--eEEecCCccccC
Confidence 1100000012222211 2223466888 99998862 44 677765454444
No 306
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=59.75 E-value=90 Score=41.90 Aligned_cols=118 Identities=10% Similarity=-0.048 Sum_probs=74.8
Q ss_pred EEEEEcCCC-CeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCC-EEEEEeCC-CcEEEee
Q 000080 2223 RAFSSHPLR-PFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGH-RFASAALD-GTVCTWQ 2299 (2389)
Q Consensus 2223 rsVAFsPdG-~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~-~LASgS~D-gTVkLWD 2299 (2389)
..||+.+.+ +++++-+..++|+..++. |+...++.. . .....+.|+++|.+. .+.+-..+ +.|..-+
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ld-G~~~~~l~~--~-------~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~ 543 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLFR--E-------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 543 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEEEE--C-------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCC-CCeEEEEEe--C-------CCCCcceEEEecCCCCEEEecCCCCCeEEEEe
Confidence 567999876 577787888999999985 655555421 1 124579999999854 44444333 6777777
Q ss_pred CCCCCccCcccceee-eecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE
Q 000080 2300 LEVGGRSNVRPMESC-LCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI 2362 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl-~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL 2362 (2389)
+.... ...+ ...-...+.|++.+.+|.+..+ .+..+.|+.-|+ .+..++.+
T Consensus 544 ~dG~~------~~~lv~~~l~~P~GLavD~~~~~LYwa---D~~~~~I~~~d~---dG~~~~~v 595 (791)
T 3m0c_C 544 LNGVD------IYSLVTENIQWPNGITLDLLSGRLYWV---DSKLHSISSIDV---NGGNRKTI 595 (791)
T ss_dssp TTSCC------EEEEECSSCSCEEEEEEETTTTEEEEE---ETTTTEEEEEET---TSCSCEEE
T ss_pred cCCCc------eEEEEeCCCCCceEEEEecCCCeEEEE---eCCCCcEEEEec---CCCceEEE
Confidence 76321 1222 1222567899999855555554 246678888886 34444444
No 307
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=58.98 E-value=71 Score=40.19 Aligned_cols=114 Identities=9% Similarity=0.029 Sum_probs=63.8
Q ss_pred EEEEEcCCCC--eEEEEeCCCcEEEeecCCCcee-eEecccCCCCCC--CCCCCCCEEEEEECCC----CCEEEEEeCCC
Q 000080 2223 RAFSSHPLRP--FFLVGSSNTHIYLWEFGKDKAT-ATYGVLPAANVP--PPYALASISALQFDHY----GHRFASAALDG 2293 (2389)
Q Consensus 2223 rsVAFsPdG~--~LASGS~DgTIRLWDl~tGk~l-~Tl~vl~gh~~p--~~GH~~~V~sVaFSPD----G~~LASgS~Dg 2293 (2389)
++|+|.|||. +|+ +...|.|++++.. |... ..+..++.-... ..+-......|+|+|| |..+++-+.+.
T Consensus 17 ~~~a~~pdG~~rl~V-~er~G~i~~~~~~-g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 17 VGALHSGDGSQRLFI-LEKEGYVKILTPE-GEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp EEEECCSSSSCCEEE-EETTTEEEEECTT-SCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred eEEEECCCCCeEEEE-EeCCceEEEEeCC-CCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 8899999996 555 4688999999853 3211 111111110000 0012356889999997 77777755321
Q ss_pred ------------cEEEeeCCCCC--c---cCcccceeee--ecCCCeeEEEEecCCCCEEEEeec
Q 000080 2294 ------------TVCTWQLEVGG--R---SNVRPMESCL--CFSSHAMDVSYITSSGSVIAAAGH 2339 (2389)
Q Consensus 2294 ------------TVkLWDl~tgg--r---s~~k~l~tl~--gHs~~V~sVAFSP~DGslLASAG~ 2339 (2389)
.|.-|.+..+. . ...+.+.... ........++|.| ||.+.++.|.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCC
Confidence 34445554320 0 0112233322 1223457899999 9999998873
No 308
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=57.70 E-value=52 Score=40.12 Aligned_cols=105 Identities=10% Similarity=0.092 Sum_probs=61.3
Q ss_pred CCcEEEeecC---CCceeeEecccCCCCC---CCCC-CCCCEEEEEECCCCCEEEEEeCC-CcEEEeeCCCCCccCcccc
Q 000080 2240 NTHIYLWEFG---KDKATATYGVLPAANV---PPPY-ALASISALQFDHYGHRFASAALD-GTVCTWQLEVGGRSNVRPM 2311 (2389)
Q Consensus 2240 DgTIRLWDl~---tGk~l~Tl~vl~gh~~---p~~G-H~~~V~sVaFSPDG~~LASgS~D-gTVkLWDl~tggrs~~k~l 2311 (2389)
+..|..+|+. +|+.+.... +.+..- ++.| -......++..++|+..++++.- +.|-..+.. |+ ...+.
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~d-L~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd--G~-~~~~~ 174 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVN-FEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD--GK-TVSTF 174 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEE-SHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT--SC-CEEEE
T ss_pred CCEEEEEcCCcCCCCCEEEEec-CccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC--CC-EEeee
Confidence 6789999998 787654332 111000 0000 01247899999999999999887 764444433 21 11111
Q ss_pred eeee--e-cCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCC
Q 000080 2312 ESCL--C-FSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTL 2352 (2389)
Q Consensus 2312 ~tl~--g-Hs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l 2352 (2389)
..-. . .....+.++|+| ||.+|+.+. + ++.+.-.|+.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~--~-~g~L~~fD~~ 214 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDP-HSNKLIAFG--G-PRALTAFDVS 214 (334)
T ss_dssp EECCCCSSSCCSCSEEEEET-TTTEEEEES--S-SSSEEEEECS
T ss_pred eecCCCcccccCcceEEEeC-CCCEEEEEc--C-CCeEEEEcCC
Confidence 1100 0 112355899999 888888763 4 7778778863
No 309
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=56.74 E-value=51 Score=41.10 Aligned_cols=63 Identities=16% Similarity=0.176 Sum_probs=37.0
Q ss_pred EEEEEcC----CCCeEEEEeC------------CCcEEEeecCCC--ce---eeEecccCCCCCCCCCCCCCEEEEEECC
Q 000080 2223 RAFSSHP----LRPFFLVGSS------------NTHIYLWEFGKD--KA---TATYGVLPAANVPPPYALASISALQFDH 2281 (2389)
Q Consensus 2223 rsVAFsP----dG~~LASGS~------------DgTIRLWDl~tG--k~---l~Tl~vl~gh~~p~~GH~~~V~sVaFSP 2281 (2389)
..|+||| ++.++++-+. ...|.-++...+ +. ...+..++. +..+.-..|+|.|
T Consensus 80 lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~------~~~H~~~~l~f~p 153 (454)
T 1cru_A 80 LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS------SKDHQSGRLVIGP 153 (454)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC------CSSCCEEEEEECT
T ss_pred eEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC------CCCCCCCeEeECC
Confidence 5679999 5666666543 235666665332 11 112222222 1224579999999
Q ss_pred CCCEEEEEeC
Q 000080 2282 YGHRFASAAL 2291 (2389)
Q Consensus 2282 DG~~LASgS~ 2291 (2389)
||+++++.+.
T Consensus 154 DG~Lyv~~Gd 163 (454)
T 1cru_A 154 DQKIYYTIGD 163 (454)
T ss_dssp TSCEEEEECC
T ss_pred CCeEEEEECC
Confidence 9998887654
No 310
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=54.67 E-value=21 Score=46.29 Aligned_cols=81 Identities=12% Similarity=0.026 Sum_probs=50.2
Q ss_pred CCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceeeeecC
Q 000080 2239 SNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFS 2318 (2389)
Q Consensus 2239 ~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl~gHs 2318 (2389)
.+|.|+-||..+|+.+-.... + .| ...+ .+.-.|.++..|+.||.++.+|.++|+ .+.+..-..
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~--~--~~--~~~g-----~~~tagg~vf~gt~dg~l~A~D~~tG~-----~lW~~~l~~ 514 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKME--R--FA--VWGG-----TMATAGDLVFYGTLDGYLKARDSDTGD-----LLWKFKIPS 514 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEE--S--SC--CCSB-----CEEETTTEEEEECTTSEEEEEETTTCC-----EEEEEECSS
T ss_pred CcCeEEEEECCCCCEEeEecC--C--CC--ccCc-----ceEecCCEEEEECCCCeEEEEECCCCC-----EEEEeeCCC
Confidence 468999999999998766531 1 01 1111 123356667779999999999999983 344433222
Q ss_pred -CCeeEEEEecCCCCE-EEE
Q 000080 2319 -SHAMDVSYITSSGSV-IAA 2336 (2389)
Q Consensus 2319 -~~V~sVAFSP~DGsl-LAS 2336 (2389)
....-+.|.. +|+. +++
T Consensus 515 g~~~~P~~y~~-~G~qyv~~ 533 (599)
T 1w6s_A 515 GAIGYPMTYTH-KGTQYVAI 533 (599)
T ss_dssp CCCSCCEEEEE-TTEEEEEE
T ss_pred CcEeccEEEEe-CCEEEEEE
Confidence 2223467777 7764 443
No 311
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=53.78 E-value=1.5e+02 Score=38.48 Aligned_cols=137 Identities=14% Similarity=-0.028 Sum_probs=78.8
Q ss_pred EEEEEcCCCC-eEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCC-CEEEEEeCCCcEEEeeC
Q 000080 2223 RAFSSHPLRP-FFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYG-HRFASAALDGTVCTWQL 2300 (2389)
Q Consensus 2223 rsVAFsPdG~-~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG-~~LASgS~DgTVkLWDl 2300 (2389)
.+|+|++.+. ++.+-...+.|+-+++.......+.. .. -......||+++.+ +.+.+-+..++|.+-++
T Consensus 43 ~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~--~~-------~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~ 113 (619)
T 3s94_A 43 AAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV--VS-------GLLSPDGLACDWLGEKLYWTDSETNRIEVSNL 113 (619)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEE--CS-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEE--eC-------CCCCcCeEEEEecCCEEEEEeCCCCEEEEEEC
Confidence 7899999555 56666667889999985432222221 11 12457999999965 45566667799999998
Q ss_pred CCCCccCcccceeee-ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE-eecCcEEEEeecccc
Q 000080 2301 EVGGRSNVRPMESCL-CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT-CHEGLYDLFLPLKLL 2378 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~-gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~-GH~~~V~svA~~~~~ 2378 (2389)
.... ...+. ..-...++|++.|..|.+..|- .+ ....|..-++ .|.....+. ..-..-..|+.++++
T Consensus 114 dG~~------~~~l~~~~l~~P~~Iavdp~~g~ly~tD-~g-~~~~I~r~~~---dG~~~~~l~~~~~~~P~Glald~~~ 182 (619)
T 3s94_A 114 DGSL------RKVLFWQELDQPRAIALDPSSGFMYWTD-WG-EVPKIERAGM---DGSSRFIIINSEIYWPNGLTLDYEE 182 (619)
T ss_dssp TSCS------CEEEECSSCSCCCCEEEETTTTEEEEEE-CS-SSCEEEEEET---TSCSCEEEECSSCSSEEEEEEETTT
T ss_pred CCCC------EEEEEeCCCCCCceEEEecCCCeEEEec-cC-CCCEEEEEEC---CCCceEEEEeCCCCCCcEEEEEccC
Confidence 7431 12222 2334567899999566666663 21 2344444443 344444443 222344567776653
Q ss_pred h
Q 000080 2379 N 2379 (2389)
Q Consensus 2379 ~ 2379 (2389)
+
T Consensus 183 ~ 183 (619)
T 3s94_A 183 Q 183 (619)
T ss_dssp T
T ss_pred C
Confidence 3
No 312
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=52.70 E-value=38 Score=46.15 Aligned_cols=37 Identities=5% Similarity=0.038 Sum_probs=33.0
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEec
Q 000080 2222 TRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYG 2258 (2389)
Q Consensus 2222 VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~ 2258 (2389)
+-+++.+++..++.+=+.|+++|+|++.+|+++.+..
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 3677888999999999999999999999999998864
No 313
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=51.71 E-value=2.3e+02 Score=36.76 Aligned_cols=136 Identities=8% Similarity=-0.091 Sum_probs=81.9
Q ss_pred EEEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCC-CCEEEEEeCCCcEEEee
Q 000080 2222 TRAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHY-GHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2222 VrsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD-G~~LASgS~DgTVkLWD 2299 (2389)
+.+|+|.+ ++.++.+-...+.|+-++.. |....++. .. .......+|+.+. |+.+.+-+..++|.+-+
T Consensus 351 ~~~ld~d~~~~~ly~sD~~~~~I~r~~~~-g~~~~~v~--~~-------~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~ 420 (619)
T 3s94_A 351 AIAIDYDPVEGYIYWTDDEVRAIRRSFID-GSGSQFVV--TA-------QIAHPDGIAVDWVARNLYWTDTGTDRIEVTR 420 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEE--CS-------SCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cEEEEEEcCCCeEEEEeCCCCeEEEEEcC-CCccEEEE--EC-------CCCCcCceEEecccCcEEEEeCCCCcEEEEe
Confidence 38899999 56667776778899999985 43333331 11 1244678999975 56777777789999998
Q ss_pred CCCCCccCcccceeee-ecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEE-eecCcEEEEeeccc
Q 000080 2300 LEVGGRSNVRPMESCL-CFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASIT-CHEGLYDLFLPLKL 2377 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~-gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~-GH~~~V~svA~~~~ 2377 (2389)
+.... ...+. .--...++|++.|..|.+..|- . +....|.-.++ .|.....+. +.-.+-+.||..++
T Consensus 421 ~~G~~------~~~l~~~~l~~P~~iavdp~~G~ly~tD-~-g~~~~I~r~~~---dG~~~~~l~~~~l~~P~GlalD~~ 489 (619)
T 3s94_A 421 LNGTM------RKILISEDLEEPRAIVLDPMVGYMYWTD-W-GEIPKIERAAL---DGSDRVVLVNTSLGWPNGLALDYD 489 (619)
T ss_dssp TTSCS------CEEEECTTCCSEEEEEEETTTTEEEEEE-C-SSSCEEEEEET---TSCSCEEEECSSCSCEEEEEEETT
T ss_pred CCCCe------EEEEEECCCCCeeeEEEEcCCCcEEEec-C-CCCCEEEEEcc---CCCccEEEEeCCCCCCeeeEEccc
Confidence 87431 12222 1235678999999567777763 1 12344554454 344333332 22334556666654
Q ss_pred c
Q 000080 2378 L 2378 (2389)
Q Consensus 2378 ~ 2378 (2389)
+
T Consensus 490 ~ 490 (619)
T 3s94_A 490 E 490 (619)
T ss_dssp T
T ss_pred C
Confidence 3
No 314
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=51.02 E-value=92 Score=38.33 Aligned_cols=103 Identities=9% Similarity=0.186 Sum_probs=62.9
Q ss_pred CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECC----CCCE--E--EEEeC--CCcEEEeeC
Q 000080 2231 RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDH----YGHR--F--ASAAL--DGTVCTWQL 2300 (2389)
Q Consensus 2231 G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSP----DG~~--L--ASgS~--DgTVkLWDl 2300 (2389)
..+++...-++-+.++|+ +|+.++.+. + +.++.|..-| .|+. + ||.-. +++|+++++
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~---~---------g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i 106 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYN---T---------GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI 106 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEEC---C---------SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEcc---C---------CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE
Confidence 335665566778999999 899998873 1 3356665555 3433 3 33334 689999977
Q ss_pred CCCCccCcccceeee------ecC-CCeeEEEE--ecCCCCEEEEeecCCCCCeEEEeeCC
Q 000080 2301 EVGGRSNVRPMESCL------CFS-SHAMDVSY--ITSSGSVIAAAGHSSNGINVVVWDTL 2352 (2389)
Q Consensus 2301 ~tggrs~~k~l~tl~------gHs-~~V~sVAF--SP~DGslLASAG~sS~D~TVrLWD~l 2352 (2389)
.... .++.... +.. ..++.+|+ +|.+|++.|... ..++.+..|++.
T Consensus 107 Dp~~----~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~--~k~G~~~q~~l~ 161 (355)
T 3amr_A 107 DGKN----GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVT--GKEGEFEQYELK 161 (355)
T ss_dssp CTTT----CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEE--CSSSEEEEEEEE
T ss_pred CCCC----CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEE--CCCCeEEEEEEE
Confidence 4211 1233321 122 66778888 675666333332 477999999984
No 315
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=48.14 E-value=46 Score=43.66 Aligned_cols=111 Identities=8% Similarity=-0.088 Sum_probs=67.3
Q ss_pred EEEEEcC-CCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCC-EEEEEeCC-CcEEEee
Q 000080 2223 RAFSSHP-LRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGH-RFASAALD-GTVCTWQ 2299 (2389)
Q Consensus 2223 rsVAFsP-dG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~-~LASgS~D-gTVkLWD 2299 (2389)
..|++.+ .+.++++-...++|.+.+.. |+.+.++. ... ....+.|+++|++. .+.+-... ++|...+
T Consensus 456 ~glavD~~~g~LY~tD~~~~~I~v~d~d-g~~~~~l~--~~~-------~~~P~giavDp~~g~ly~td~~~~~~I~~~~ 525 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLF--REQ-------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 525 (699)
T ss_dssp CCEECCCSSSBCEECCTTTSCEEEEBSS-SCCEEEEC--CCS-------SCCCCCEECCSSSSCCEECCCSSSCCEEBCC
T ss_pred ceEEEEeeCCcEEEEeccCCeEEEEecC-CCceEEEE--eCC-------CCCcceEEEccCCCcEEEcccCCCCeEEEEe
Confidence 4568885 45677776778899999985 54444442 111 13357889999754 44444333 7788777
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeC
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDT 2351 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~ 2351 (2389)
+.... .+.+. ..--...+.||++|..+.+..+- +..+.|...|+
T Consensus 526 ~dG~~---~~~l~--~~~l~~PnGlavd~~~~~LY~aD---~~~~~I~~~d~ 569 (699)
T 1n7d_A 526 LNGVD---IYSLV--TENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDV 569 (699)
T ss_dssp SSSCC---CCEES--CSSCSSCCCEEECTTTCCEEEEE---TTTTEEEEECS
T ss_pred CCCCC---eeEEE--eCCCCCccEEEEeccCCEEEEEe---cCCCeEEEEcc
Confidence 75321 11111 11123456799999556666553 56778999887
No 316
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=47.61 E-value=65 Score=38.45 Aligned_cols=108 Identities=16% Similarity=0.088 Sum_probs=55.4
Q ss_pred EEEEEcCC----CCeEEEEeC-------CCcEEEeecCCC--c--eeeE-ecccCCCCCCCCCCCCCEEEEEECCCCCEE
Q 000080 2223 RAFSSHPL----RPFFLVGSS-------NTHIYLWEFGKD--K--ATAT-YGVLPAANVPPPYALASISALQFDHYGHRF 2286 (2389)
Q Consensus 2223 rsVAFsPd----G~~LASGS~-------DgTIRLWDl~tG--k--~l~T-l~vl~gh~~p~~GH~~~V~sVaFSPDG~~L 2286 (2389)
..|+|||+ +.++++-+. ...|.-|++..+ + ..++ +..++.. +...| .-..++|.|||..+
T Consensus 69 ~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~--~~~~h--~~~~l~~~pdG~Ly 144 (353)
T 2g8s_A 69 LDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKL--STGNH--FGGRLVFDGKGYLF 144 (353)
T ss_dssp EEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCC--BSSSC--CCCCEEECSSSEEE
T ss_pred eeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCC--CCCcc--cCccEEECCCCcEE
Confidence 56799995 666666443 235666666533 1 1111 2222210 00123 23679999999777
Q ss_pred EEEeCC-------------CcEEEeeCCCCCc-cC--------cccceeeeecCCCeeEEEEecCCCCEEEE
Q 000080 2287 ASAALD-------------GTVCTWQLEVGGR-SN--------VRPMESCLCFSSHAMDVSYITSSGSVIAA 2336 (2389)
Q Consensus 2287 ASgS~D-------------gTVkLWDl~tggr-s~--------~k~l~tl~gHs~~V~sVAFSP~DGslLAS 2336 (2389)
++.+.. |.|.-.|....-. .+ ...+. -.||. ....++|.|.+|++.++
T Consensus 145 v~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~-a~G~r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 145 IALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIW-SYGIR-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp EEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEE-EECCS-EEEEEEEETTTTEEEEE
T ss_pred EEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEE-EEcCc-CccceEEECCCCCEEEE
Confidence 765432 3444444432100 00 01112 23443 35789999966777765
No 317
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=47.33 E-value=61 Score=42.52 Aligned_cols=120 Identities=8% Similarity=0.030 Sum_probs=69.0
Q ss_pred EEEEEcCCC-CeEEEEeCC-CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCC-CEEEEEeCCCcEEEee
Q 000080 2223 RAFSSHPLR-PFFLVGSSN-THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYG-HRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2223 rsVAFsPdG-~~LASGS~D-gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG-~~LASgS~DgTVkLWD 2299 (2389)
+.|+++|++ .++++-... ++|+..++. |+...++.. . ....-+.|+|+|++ +.+.+-+..++|...|
T Consensus 499 ~giavDp~~g~ly~td~~~~~~I~~~~~d-G~~~~~l~~--~-------~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d 568 (699)
T 1n7d_A 499 RAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVT--E-------NIQWPNGITLDLLSGRLYWVDSKLHSISSID 568 (699)
T ss_dssp CCEECCSSSSCCEECCCSSSCCEEBCCSS-SCCCCEESC--S-------SCSSCCCEEECTTTCCEEEEETTTTEEEEEC
T ss_pred ceEEEccCCCcEEEcccCCCCeEEEEeCC-CCCeeEEEe--C-------CCCCccEEEEeccCCEEEEEecCCCeEEEEc
Confidence 567999964 455554333 788888873 544434310 1 12345789999985 5556666778899999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEE
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASI 2362 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL 2362 (2389)
+.... .+.+....+.-.....+++.. + .++.+. ...+.|...|. .+++.+..+
T Consensus 569 ~dG~~---~~~~~~~~~~~~~P~glavd~-~-~lywtd---~~~~~V~~~d~--~~G~~~~~i 621 (699)
T 1n7d_A 569 VNGGN---RKTILEDEKRLAHPFSLAVFE-D-KVFWTD---IINEAIFSANR--LTGSDVNLL 621 (699)
T ss_dssp SSSSC---CEEECCCSSSCSSCCCCEEET-T-EEEEEC---STTTCEEEEET--TTEEEEECC
T ss_pred cCCCc---eEEEEecCCcCCCceEeEEEC-C-EEEEEe---CCCCeEEEEEc--cCCCceEEe
Confidence 87432 122222111223334566765 3 566554 35678888885 234444444
No 318
>3bg1_B Nucleoporin NUP145; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Saccharomyces cerevisiae} PDB: 3bg0_B 3iko_B
Probab=42.05 E-value=36 Score=42.85 Aligned_cols=40 Identities=20% Similarity=0.235 Sum_probs=36.6
Q ss_pred hcchhHHHHHHHHhcCChhHHHHHHHHhcCChhhhhhhhhh
Q 000080 1321 GRHQLELAIAFFLLGGDAASAVTVCARNLGDVQLALVICRL 1361 (2389)
Q Consensus 1321 sK~Ry~~AAAFFLLAg~lkDAV~Vc~~~L~D~qLAi~IaRL 1361 (2389)
++..++.++-..|.++++.+|++++++. +|+.||.+|+=+
T Consensus 176 ~~~~~~e~i~~~L~~~~v~eA~~~Ai~~-~d~rLA~Llsq~ 215 (442)
T 3bg1_B 176 NSSNEIEQIFLYLLLNDVVRASKLAIES-KNGHLSVLISYL 215 (442)
T ss_dssp TCSCHHHHHHHHHTTTCHHHHHHHHHHT-TCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHCCCHHHHHHHHHHC-CCcHHHHHHHHh
Confidence 5788888888889999999999999988 999999999987
No 319
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=40.41 E-value=2.5e+02 Score=40.62 Aligned_cols=88 Identities=18% Similarity=0.255 Sum_probs=62.7
Q ss_pred HHHHhhcchhHHHHHHHHhcCChhHHHHHHHHhcCChhhhhhhhhhhc-------------cCCChhhHhhHhhhccccc
Q 000080 1316 AYVLLGRHQLELAIAFFLLGGDAASAVTVCARNLGDVQLALVICRLVE-------------KHGGPLERNLVTKFILPSS 1382 (2389)
Q Consensus 1316 AyaLLsK~Ry~~AAAFFLLAg~lkDAV~Vc~~~L~D~qLAi~IaRLyE-------------gd~gp~l~~lL~~~vLp~a 1382 (2389)
|..++...+|+.|++-|=-++...+|++|+++++++++-|+-++.-.+ ..+ -.++-+.-++
T Consensus 1056 A~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G--~~kEAIdsYi---- 1129 (1630)
T 1xi4_A 1056 ANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKG--MVKEAIDSYI---- 1129 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCC--CHHHHHHHHH----
Confidence 888999999999999999999999999999999999999987773222 111 0122222222
Q ss_pred cccCC--hhH-HHHHHHHhCChhHHHHHHhc
Q 000080 1383 IERGD--YWL-TSLLEWELGNYSQSFLTMLG 1410 (2389)
Q Consensus 1383 ~~~gD--rwL-~S~a~W~L~~~~~Av~~Ll~ 1410 (2389)
+.+| .|. ..-++=.+|+|+.|++-|..
T Consensus 1130 -KAdD~say~eVa~~~~~lGkyEEAIeyL~m 1159 (1630)
T 1xi4_A 1130 -KADDPSSYMEVVQAANTSGNWEELVKYLQM 1159 (1630)
T ss_pred -hcCChHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 1122 222 34557788999999988864
No 320
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=38.23 E-value=6e+02 Score=33.03 Aligned_cols=132 Identities=9% Similarity=-0.026 Sum_probs=77.8
Q ss_pred EEEEEcCC-CCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCC-CCEEEEEeC-CCcEEEee
Q 000080 2223 RAFSSHPL-RPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHY-GHRFASAAL-DGTVCTWQ 2299 (2389)
Q Consensus 2223 rsVAFsPd-G~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPD-G~~LASgS~-DgTVkLWD 2299 (2389)
..||+.+. ++++.+-+..+.|..-+.. |+...++. .. ....-+.|++.|. |..+.+--. .+.|...+
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~d-G~~~~~l~--~~-------~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~ 152 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLD-GQHRQVLV--WK-------DLDSPRALALDPAEGFMYWTEWGGKPKIDRAA 152 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETT-STTCEEEE--CS-------SCCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecC-CCcEEEEE--eC-------CCCCcccEEEccCCCeEEEeCCCCCCEEEEEe
Confidence 45688875 5566777778899999984 54444442 01 1244699999995 555554322 45666666
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCcEEEEeecc
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGLYDLFLPLK 2376 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~V~svA~~~ 2376 (2389)
+... . ...+...-...+.+++.+ ++..|--+ .+..+.|...|+. +...+.+...-..-..+|..+
T Consensus 153 ~dG~---~---~~~l~~~~~~P~GlalD~-~~~~LY~a--D~~~~~I~~~d~d---G~~~~v~~~~l~~P~glav~~ 217 (628)
T 4a0p_A 153 MDGS---E---RTTLVPNVGRANGLTIDY-AKRRLYWT--DLDTNLIESSNML---GLNREVIADDLPHPFGLTQYQ 217 (628)
T ss_dssp TTSC---S---CEEEECSCSSEEEEEEET-TTTEEEEE--ETTTTEEEEEETT---SCSCEEEEECCSCEEEEEEET
T ss_pred CCCC---c---eEEEECCCCCcceEEEcc-ccCEEEEE--ECCCCEEEEEcCC---CCceEEeeccCCCceEEEEEC
Confidence 6532 1 122222345678999999 54544444 3567888888873 333344444333344566554
No 321
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=37.74 E-value=1.7e+02 Score=33.11 Aligned_cols=107 Identities=16% Similarity=0.145 Sum_probs=58.6
Q ss_pred CCCCeEEEEeCC----CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC------CcEEEe
Q 000080 2229 PLRPFFLVGSSN----THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD------GTVCTW 2298 (2389)
Q Consensus 2229 PdG~~LASGS~D----gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D------gTVkLW 2298 (2389)
-++.+++.|+.+ ..+..+|..+++-... .. +|.+-. .-.++.+ +|+.++.|+.+ ..+..+
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~-~~-----~p~~r~--~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 123 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSK-LG-----PPTPRD--SLAACAA--EGKIYTSGGSEVGNSALYLFECY 123 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEE-EC-----CSSCCB--SCEEEEE--TTEEEEECCBBTTBSCCCCEEEE
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEEC-CC-----CCcccc--ceeEEEE--CCEEEEECCCCCCCcEeeeEEEE
Confidence 377888888866 6788999887753222 11 121111 1122333 78888888876 568888
Q ss_pred eCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCC------CCeEEEeeC
Q 000080 2299 QLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSN------GINVVVWDT 2351 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~------D~TVrLWD~ 2351 (2389)
|+.+..= ..+..+. ....-.+++.. +|++++.||.... -+.+.++|+
T Consensus 124 d~~~~~W---~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 124 DTRTESW---HTKPSML-TQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp ETTTTEE---EEECCCS-SCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred eCCCCce---EeCCCCc-CCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCC
Confidence 9887410 0111110 00111122233 5788888775433 245778886
No 322
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=35.34 E-value=56 Score=44.54 Aligned_cols=32 Identities=16% Similarity=0.114 Sum_probs=29.1
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeeCCCC
Q 000080 2272 ASISALQFDHYGHRFASAALDGTVCTWQLEVG 2303 (2389)
Q Consensus 2272 ~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tg 2303 (2389)
..|.+++..+|..++.+-+.|+++|+|+++++
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTT
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCC
Confidence 46788888899999999999999999999987
No 323
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=34.77 E-value=2e+02 Score=33.98 Aligned_cols=125 Identities=6% Similarity=-0.034 Sum_probs=67.5
Q ss_pred EEEcCCCCeEEEEeC--------------CCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEe
Q 000080 2225 FSSHPLRPFFLVGSS--------------NTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAA 2290 (2389)
Q Consensus 2225 VAFsPdG~~LASGS~--------------DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS 2290 (2389)
--++|+|.+|.-.+. +..|+.-++..++. ..+.. . .+.+|+|+|++|+=.+
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~-~~l~~------------~--~~~~~s~~g~~Iy~~~ 122 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS-TVLDP------------D--PCIYASLIGNYIYYLH 122 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC-EEEEC------------S--CEEEEEEETTEEEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc-eEeec------------C--CccEEEEeCCEEEEEe
Confidence 356899998776654 34678888765543 22310 1 1237889999999776
Q ss_pred --CCCcEEEeeCCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCCCeEEEeeCCCCCCCceEEEEeecCc
Q 000080 2291 --LDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNGINVVVWDTLAPPTSSRASITCHEGL 2368 (2389)
Q Consensus 2291 --~DgTVkLWDl~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D~TVrLWD~l~~tg~~v~sL~GH~~~ 2368 (2389)
.++.-.|+-+...+. ....+..+.. .+|+| +|+.|.-.. ..+.+|..=++ .+...+.+. .+.
T Consensus 123 ~~~~~~~~Iy~~~~dGs----~~~~lt~~~~----~~~~~-~g~~iy~t~--~g~~~Iy~~~l---~g~~~~~l~--~~~ 186 (302)
T 3s25_A 123 YDTQTATSLYRIRIDGE----EKKKIKNHYL----FTCNT-SDRYFYYNN--PKNGQLYRYDT---ASQSEALFY--DCN 186 (302)
T ss_dssp ESSSSCEEEEEEETTSC----CCEEEESSCC----CCSEE-ETTEEEEEC--TTTCCEEEEET---TTTEEEEEE--CSC
T ss_pred ecCCCCceEEEEECCCC----CeEEEeCCCc----eEeeE-ECCEEEEEe--CCCceEEEEEC---CCCCEEEEe--CCC
Confidence 344444443333221 1233333322 45788 778887542 23456655554 344444442 222
Q ss_pred EEEEeecccchhh
Q 000080 2369 YDLFLPLKLLNFA 2381 (2389)
Q Consensus 2369 V~svA~~~~~~~~ 2381 (2389)
.. .+.+|+|+++
T Consensus 187 ~~-~~~~P~g~~i 198 (302)
T 3s25_A 187 CY-KPVVLDDTNV 198 (302)
T ss_dssp EE-EEEEEETTEE
T ss_pred cc-ceeeecCCEE
Confidence 22 3455777764
No 324
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=34.41 E-value=3.9e+02 Score=32.96 Aligned_cols=126 Identities=13% Similarity=0.174 Sum_probs=77.2
Q ss_pred EEEEE--cCC-CC-eEEEEeCCCcEEEeec---C----CCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeC
Q 000080 2223 RAFSS--HPL-RP-FFLVGSSNTHIYLWEF---G----KDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAAL 2291 (2389)
Q Consensus 2223 rsVAF--sPd-G~-~LASGS~DgTIRLWDl---~----tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~ 2291 (2389)
..+++ +|. ++ ++.....+|.+..|++ . +++.+++|.. | +.+..++..+...+|-.+-+
T Consensus 131 yGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l---------g--sq~EgcvvDd~~g~Lyv~eE 199 (355)
T 3amr_A 131 YGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM---------N--SQTEGMAADDEYGRLYIAEE 199 (355)
T ss_dssp CCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC---------S--SCEEEEEEETTTTEEEEEET
T ss_pred eEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC---------C--CCcceEEEcCCCCeEEEecc
Confidence 44577 774 54 5666778899999998 2 3356777742 1 45889999999999999999
Q ss_pred CCcEEEeeCCCCCccCcccceee-ee-cCCCeeEEEEecC-CCC--EEEEeecCCCCCeEEEeeCCCCCCCceEEEE
Q 000080 2292 DGTVCTWQLEVGGRSNVRPMESC-LC-FSSHAMDVSYITS-SGS--VIAAAGHSSNGINVVVWDTLAPPTSSRASIT 2363 (2389)
Q Consensus 2292 DgTVkLWDl~tggrs~~k~l~tl-~g-Hs~~V~sVAFSP~-DGs--lLASAG~sS~D~TVrLWD~l~~tg~~v~sL~ 2363 (2389)
|..|-..|.+-.+-...+.+... .+ ....+..+++.+. +|+ +|||. -.+++.-++|.. ++.+.+.+|.
T Consensus 200 d~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs---QG~~s~~Vydr~-~~~~~vg~f~ 272 (355)
T 3amr_A 200 DEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS---QGNSSYAIYDRQ-GKNKYVADFR 272 (355)
T ss_dssp TTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE---GGGTEEEEEESS-TTCCEEEEEE
T ss_pred cceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEc---CCCCEEEEEECC-CCCcEEEEEE
Confidence 96544444331110000222222 12 2236788888642 445 55542 256799999973 3455577774
No 325
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=33.84 E-value=5.2e+02 Score=29.03 Aligned_cols=106 Identities=11% Similarity=0.192 Sum_probs=57.7
Q ss_pred CCCeEEEEeCC-----CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCC-----CcEEEee
Q 000080 2230 LRPFFLVGSSN-----THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALD-----GTVCTWQ 2299 (2389)
Q Consensus 2230 dG~~LASGS~D-----gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~D-----gTVkLWD 2299 (2389)
++++++.|+.+ ..+..+|+.+++=... .. +|.+. ..-.++.+ +++.++.|+.+ +.|..+|
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~-----~p~~r--~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd 228 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV-TP-----MATKR--SGAGVALL--NDHIYVVGGFDGTAHLSSVEAYN 228 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEE-CC-----CSSCC--BSCEEEEE--TTEEEEECCBCSSSBCCCEEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeC-CC-----CCccc--ccceEEEE--CCEEEEEeCCCCCcccceEEEEe
Confidence 78888888865 4588999887753221 11 22211 11223333 77888888875 5688999
Q ss_pred CCCCCccCcccceeeeecCCCeeEEEEecCCCCEEEEeecCCCC--CeEEEeeC
Q 000080 2300 LEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHSSNG--INVVVWDT 2351 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs~~V~sVAFSP~DGslLASAG~sS~D--~TVrLWD~ 2351 (2389)
+++..= ..+..+. ....-.+++.. +|++++.+|.+... +.|.++|+
T Consensus 229 ~~~~~W---~~~~~~p-~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 229 IRTDSW---TTVTSMT-TPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp TTTTEE---EEECCCS-SCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEET
T ss_pred CCCCcE---EECCCCC-CcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcC
Confidence 987410 1111111 01111122222 57888887743222 46778886
No 326
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=28.18 E-value=1.2e+02 Score=32.21 Aligned_cols=68 Identities=12% Similarity=0.049 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhcCCChhhhhcccCCCCCCCCCCccccccCCCcccccccccCCCCCCCccccccccccccccccccccH
Q 000080 1462 WAALMRATALNRCGLPLEALDCLSSSPSTIGGTDQESVLNIGHSHILPEILKPSAATGSSNWLLRDVALHLESCAKLDLS 1541 (2389)
Q Consensus 1462 ~~~l~~a~~l~RmGC~lLALdll~~s~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~nw~~~~~~~~~~~~~~~~~~ 1541 (2389)
......+..+.++|-.-.|++.+.+.+.. .|.. .. +-...+.......+.+.|
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~----------------------~~~~---~~--~~~~l~~~~~~~~~~~~A 192 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKR----------------------APED---AR--GYSNRAAALAKLMSFPEA 192 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------------CTTC---HH--HHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhc----------------------Cccc---HH--HHHHHHHHHHHhCCHHHH
Confidence 34556677789999999999998874321 1110 11 122334445566788999
Q ss_pred HHHHHHHhhcCCCCC
Q 000080 1542 LQYFSKLIRDHPSWP 1556 (2389)
Q Consensus 1542 ~~~~s~~~~~~~~~~ 1556 (2389)
+++|.+.++..|..+
T Consensus 193 ~~~~~~al~~~~~~~ 207 (258)
T 3uq3_A 193 IADCNKAIEKDPNFV 207 (258)
T ss_dssp HHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhCHHHH
Confidence 999999999987643
No 327
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=27.27 E-value=1.1e+02 Score=37.21 Aligned_cols=62 Identities=13% Similarity=0.013 Sum_probs=43.0
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeeCCCCCccCcccceee----eecCCCeeEEEEecC---CCCEEEE
Q 000080 2272 ASISALQFDHYGHRFASAALDGTVCTWQLEVGGRSNVRPMESC----LCFSSHAMDVSYITS---SGSVIAA 2336 (2389)
Q Consensus 2272 ~~V~sVaFSPDG~~LASgS~DgTVkLWDl~tggrs~~k~l~tl----~gHs~~V~sVAFSP~---DGslLAS 2336 (2389)
..-+.++|.|||+.|++--..|+|++++...+. ..++..+ ..-.+...+|+|+|+ +|.+.++
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~---~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR---KTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC---EEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCc---EeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 446999999999988887768999999876542 1222221 123456789999994 4777664
No 328
>3mzk_B Protein transport protein SEC16; alpha-helical-stack, beta-propeller; 2.69A {Saccharomyces cerevisiae}
Probab=26.07 E-value=80 Score=39.87 Aligned_cols=74 Identities=16% Similarity=0.277 Sum_probs=47.0
Q ss_pred HHhcCChhHHHHHHHHhcCChhhhhhhhhhhccCCChhhHhhHhhhcccccc--ccCC----hhHHHHHHHHhCChhHHH
Q 000080 1332 FLLGGDAASAVTVCARNLGDVQLALVICRLVEKHGGPLERNLVTKFILPSSI--ERGD----YWLTSLLEWELGNYSQSF 1405 (2389)
Q Consensus 1332 FLLAg~lkDAV~Vc~~~L~D~qLAi~IaRLyEgd~gp~l~~lL~~~vLp~a~--~~gD----rwL~S~a~W~L~~~~~Av 1405 (2389)
+||.|+.++||+.|+++ +++..|++||.... ...++++.++++--... ..++ ..|+-+.-=+-|+...+|
T Consensus 160 ~Ll~G~~e~Av~~al~~-~lwa~ALlLAs~~g---~e~~~~V~~~y~~~~~~~~~~~~~~~~~~Lr~Ly~v~sGn~~~~V 235 (441)
T 3mzk_B 160 FLQTGNHDEALRLALSK-RDYAIALLVGSLMG---KDRWSEVIQKYLYEGFTAGPNDQKELAHFLLLIFQVFVGNSKMAI 235 (441)
T ss_dssp HHHTTCHHHHHHHHHHT-TCHHHHHHHHHTSC---HHHHHHHHHHHHHCC------CTHHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHcCCHHHHHHHHHhC-CcHHHHHHHHHhcC---HHHHHHHHHHHHHhhcccCCccccccccHHHHHHHHHcCCHHHHH
Confidence 68999999999999998 99999999997662 23666666665542211 1111 123333333446666666
Q ss_pred HHHh
Q 000080 1406 LTML 1409 (2389)
Q Consensus 1406 ~~Ll 1409 (2389)
+.+.
T Consensus 236 ~~l~ 239 (441)
T 3mzk_B 236 KSFY 239 (441)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6554
No 329
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=24.62 E-value=1.1e+03 Score=29.33 Aligned_cols=127 Identities=11% Similarity=0.167 Sum_probs=84.0
Q ss_pred eeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEE-CCCCCEEEEEeCCCcEEEe
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQF-DHYGHRFASAALDGTVCTW 2298 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaF-SPDG~~LASgS~DgTVkLW 2298 (2389)
+.--+.-.||..+.||--+ .++++++|+++.+.++++. |+ ..|.==.+ |+ +.||-... ..|.-|
T Consensus 67 i~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~------~~-----e~VvfWkWis~--~~L~lVT~-taVyHW 131 (365)
T 2xzh_A 67 ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT------MT-----DDVTFWKWISL--NTVALVTD-NAVYHW 131 (365)
T ss_dssp CCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE------CS-----SCEEEEEECSS--SEEEEEES-SEEEEE
T ss_pred cccceeeeCCCccEEEEec-CCeEEEechHHhhhhccee------cC-----CccEEEEecCC--CeEEEEcC-CcEEEE
Confidence 3334556899999888876 7899999999998888764 11 22433333 33 46666655 679999
Q ss_pred eCCCCCccCcccceeeeecC----CCeeEEEEecCCCCEEEEeecCCCC----CeEEEeeCCCCCCCceEEEEeecCcE
Q 000080 2299 QLEVGGRSNVRPMESCLCFS----SHAMDVSYITSSGSVIAAAGHSSNG----INVVVWDTLAPPTSSRASITCHEGLY 2369 (2389)
Q Consensus 2299 Dl~tggrs~~k~l~tl~gHs----~~V~sVAFSP~DGslLASAG~sS~D----~TVrLWD~l~~tg~~v~sL~GH~~~V 2369 (2389)
+++.. + .|.+-+.-|. ..|-.-.-++ |.++++-.|.+..+ |.++|+.+ ..+.-|.++||.+-.
T Consensus 132 s~~~~--s--~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~---er~~sQ~ieGhaa~F 202 (365)
T 2xzh_A 132 SMEGE--S--QPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSV---DRKVSQPIEGHAASF 202 (365)
T ss_dssp ESSTT--C--CCEEEEECCGGGTTCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEET---TTTEEEEECCSEEEE
T ss_pred cccCC--C--CCceeeecchhcccceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEee---cccccceeeeeeeee
Confidence 99752 2 3544444343 4555666677 88888877764433 56888887 345568889987554
No 330
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=23.06 E-value=50 Score=45.76 Aligned_cols=35 Identities=6% Similarity=0.068 Sum_probs=31.2
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEec
Q 000080 2224 AFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYG 2258 (2389)
Q Consensus 2224 sVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~ 2258 (2389)
+++.+++..++.+=+.|+++|+|++.+|+|+.+..
T Consensus 242 s~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 242 SMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred EeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44678899999999999999999999999998864
No 331
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=22.55 E-value=1.9e+02 Score=37.73 Aligned_cols=56 Identities=4% Similarity=0.058 Sum_probs=36.3
Q ss_pred EEEcCCCCeEEEEeCC------------CcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEE
Q 000080 2225 FSSHPLRPFFLVGSSN------------THIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASA 2289 (2389)
Q Consensus 2225 VAFsPdG~~LASGS~D------------gTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASg 2289 (2389)
|+|+|+|.+++.--.+ ..+-.-+..+|+..+.+.+ | . ...++.++|+|||++|-..
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~------P-~--gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG------P-I--GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC------C-T--TCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC------C-C--CccCcCeeECCCCCEEEEE
Confidence 4999999976652111 1234445566776655542 1 1 3789999999999877654
No 332
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=22.04 E-value=1.4e+03 Score=29.55 Aligned_cols=129 Identities=11% Similarity=0.105 Sum_probs=83.9
Q ss_pred eeEEEEEEcCCCCeEEEEeCCCcEEEeecCCCceeeEecccCCCCCCCCCCCCCEEEEEECCCCCEEEEEeCCCcEEEee
Q 000080 2220 ISTRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDHYGHRFASAALDGTVCTWQ 2299 (2389)
Q Consensus 2220 i~VrsVAFsPdG~~LASGS~DgTIRLWDl~tGk~l~Tl~vl~gh~~p~~GH~~~V~sVaFSPDG~~LASgS~DgTVkLWD 2299 (2389)
+.--+.-.||..+.||-=+ ..++.++|+++.+.++++. |+ .+-|.===+|+ +.||-... ..|.-|+
T Consensus 66 i~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~------~~----e~VvfWkWis~--~~l~lVT~-taVyHWs 131 (494)
T 1bpo_A 66 ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT------MT----DDVTFWKWISL--NTVALVTD-NAVYHWS 131 (494)
T ss_dssp CCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEE------CS----SCCCEEEEEET--TEEEEECS-SEEEEEE
T ss_pred cccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhccee------cC----CCceEEEecCC--CeEEEEcC-CeeEEec
Confidence 3334567999999988876 7899999999998887764 11 12111111234 46666654 6799999
Q ss_pred CCCCCccCcccceeeeecC----CCeeEEEEecCCCCEEEEeecCCCC----CeEEEeeCCCCCCCceEEEEeecCcEE
Q 000080 2300 LEVGGRSNVRPMESCLCFS----SHAMDVSYITSSGSVIAAAGHSSNG----INVVVWDTLAPPTSSRASITCHEGLYD 2370 (2389)
Q Consensus 2300 l~tggrs~~k~l~tl~gHs----~~V~sVAFSP~DGslLASAG~sS~D----~TVrLWD~l~~tg~~v~sL~GH~~~V~ 2370 (2389)
++.. + .|.+-+.-|. ..|-.-.-++ |+++++-.|.+..+ |.++|+.+ ..+.-|.++||.+-..
T Consensus 132 i~~~--s--~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~---er~~sQ~ieGhaa~F~ 202 (494)
T 1bpo_A 132 MEGE--S--QPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSV---DRKVSQPIEGHAASFA 202 (494)
T ss_dssp SSSS--C--CCEEEEECCGGGTTCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEES---TTCCEEEECCSEEEEE
T ss_pred ccCC--C--CchhheecchhcccceEEEEEECC-CCCeEEEEeecccCCcccceEEEeec---cccccchheeeeeeeE
Confidence 9742 2 3544444443 4555666677 88988876764433 56888887 3455688899875543
No 333
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=20.73 E-value=3.1e+02 Score=27.34 Aligned_cols=89 Identities=12% Similarity=0.011 Sum_probs=51.5
Q ss_pred HHHHHHHHhhHHHHhhcchhHHHHHHHHhc--CChhH-----HHHHHHHhcCChhhhhhhhhhhccCCChhhHhhHhhhc
Q 000080 1306 EKNKAAALKNAYVLLGRHQLELAIAFFLLG--GDAAS-----AVTVCARNLGDVQLALVICRLVEKHGGPLERNLVTKFI 1378 (2389)
Q Consensus 1306 ~RWr~AAlKNAyaLLsK~Ry~~AAAFFLLA--g~lkD-----AV~Vc~~~L~D~qLAi~IaRLyEgd~gp~l~~lL~~~v 1378 (2389)
|..-.+...-|..++.+.+|+.|..+|--+ -+..+ ..-.|..++++++-|+...+ +.++-
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~-----------~al~~-- 81 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYS-----------YGALM-- 81 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH-----------HHHHH--
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHH-----------HHHhc--
Confidence 334445566788889999999998887532 11111 22344555566555553332 11111
Q ss_pred cccccccCChhHHHHHHHHhCChhHHHHHHh
Q 000080 1379 LPSSIERGDYWLTSLLEWELGNYSQSFLTML 1409 (2389)
Q Consensus 1379 Lp~a~~~gDrwL~S~a~W~L~~~~~Av~~Ll 1409 (2389)
-|.. ..-.+....+|..+|++++|+..+-
T Consensus 82 ~p~~--~~~~~~lg~~~~~~g~~~~A~~~~~ 110 (142)
T 2xcb_A 82 DINE--PRFPFHAAECHLQLGDLDGAESGFY 110 (142)
T ss_dssp CTTC--THHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCC--cHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 0110 0113567888999999999997663
Done!