Query 000081
Match_columns 2362
No_of_seqs 211 out of 288
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 13:45:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000081.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000081hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gmj_A CCR4-NOT transcription 100.0 2.3E-81 7.8E-86 710.9 19.9 217 966-1182 3-221 (229)
2 4b89_A General negative regula 100.0 2.4E-81 8E-86 713.3 16.0 219 961-1181 25-243 (249)
3 4b8b_A General negative regula 100.0 1.9E-78 6.5E-83 753.5 35.8 481 314-819 89-597 (603)
4 3rk6_A Polyadenylate-binding p 72.2 7.8 0.00027 45.3 8.5 188 967-1161 16-232 (234)
5 2vso_E Eukaryotic initiation f 66.8 13 0.00044 44.5 9.1 194 965-1161 31-275 (284)
6 1hu3_A EIF4GII; heat repeat, t 55.0 14 0.0005 43.6 6.5 187 968-1161 9-235 (260)
7 2rg8_A Programmed cell death p 26.3 2.6E+02 0.0089 30.7 10.2 89 666-765 6-94 (165)
8 1uw4_B UPF2, regulator of nons 21.3 1.9E+02 0.0065 34.0 8.2 124 12-169 8-133 (248)
9 2ion_A PDCD4, programmed cell 20.4 3.5E+02 0.012 29.3 9.6 90 667-765 6-95 (152)
10 2nsz_A Programmed cell death p 17.9 4.6E+02 0.016 27.5 9.6 90 667-765 4-93 (129)
No 1
>4gmj_A CCR4-NOT transcription complex subunit 1; mRNA decay, deadenylase, RNA bindin; HET: GOL; 2.70A {Homo sapiens} PDB: 4gml_A
Probab=100.00 E-value=2.3e-81 Score=710.93 Aligned_cols=217 Identities=48% Similarity=0.862 Sum_probs=214.5
Q ss_pred CChhhhHhHhhhhhcCCcccHHHHHHHHHHHhhhcchhHhHHHHHhhhcccCCcchHHHHHHHHHhCChhHHHHHHHHHH
Q 000081 966 PASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATY 1045 (2362)
Q Consensus 966 Ppe~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L~~~y~~WFA~YLV~kRasiEPN~H~LYl~fLd~l~~~~L~~~Vl~eTy 1045 (2362)
++|+|||||+|||||+|++|+++|++|+|++|+++|++|||+|||++|||+|||||+||++|+++++++.|+++|+++||
T Consensus 3 ~de~v~dki~Fi~NNls~~N~~~k~~elk~~l~~~y~~Wfa~YLV~~Ras~EpN~h~lY~~fl~~l~~~~l~~~vl~~T~ 82 (229)
T 4gmj_A 3 LEENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETY 82 (229)
T ss_dssp SCHHHHHHHHHHHHSCCSSTHHHHHHHHHHHSCGGGHHHHHHHHHHHTTTTCGGGHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcHHhhhhheeehhcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhcccccHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcchhhccChHHHHHHHHhhhhhhhhhhhcCcccccCCCChhhHHHHHHhcCc--eEEEechhhhcccccCCCc
Q 000081 1046 ENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSL 1123 (2362)
Q Consensus 1046 ~~i~~LL~Se~~~~ss~eRslLKNLGsWLG~iTLarNkPI~~k~ld~K~LLlEaY~~g~--Li~VIPFVcKVLe~~~~Sk 1123 (2362)
++|++||+|++++++++||++|||||+|||+|||||||||+||+||+|+||+|||++|+ |++|||||||||++|++|+
T Consensus 83 ~~i~~LL~s~~~~~~~~eR~~LKNLG~WLG~lTLarnkPI~~~~l~~K~LL~eay~~g~~rL~~viPFVcKvLe~~~~S~ 162 (229)
T 4gmj_A 83 RNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSV 162 (229)
T ss_dssp HHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTGGGTCCCCTTTCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHTTTTCT
T ss_pred HHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHccCCCchhcccCHHHHHHHHHHCCCceEEEeehhHHHHHHhcccCC
Confidence 99999999999999999999999999999999999999999999999999999999995 9999999999999999999
Q ss_pred cccCCCccHHHHHHHHHHHhcCCcccchhHHHHHHHHhhcCCCcccccccccccchhhh
Q 000081 1124 AYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKRE 1182 (2362)
Q Consensus 1124 VFkPPNPWtm~IL~lL~Ely~~~~LKLnLKFEIEVL~K~L~ldl~dieps~~L~~r~~~ 1182 (2362)
||||||||||+||++|+|||++||||+|||||||||||+|++|++||+|+++|++|++.
T Consensus 163 iFkPPNPW~~~IL~lL~Ely~~~~lKlnlkFEIEvLfk~l~~~~~~i~ps~~l~~~~~~ 221 (229)
T 4gmj_A 163 VFRPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRL 221 (229)
T ss_dssp TTSTTCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTTCCGGGSCCCSGGGCSTTG
T ss_pred cCCCCChhHHHHHHHHHHHHhCccchhhHHHHHHHHHHHcCCChhhcCchhhhhccchh
Confidence 99999999999999999999999999999999999999999999999999999998874
No 2
>4b89_A General negative regulator of transcription subun; 1.50A {Saccharomyces cerevisiae S288C} PDB: 4b8a_A 4b8c_B
Probab=100.00 E-value=2.4e-81 Score=713.30 Aligned_cols=219 Identities=34% Similarity=0.659 Sum_probs=211.0
Q ss_pred CCCCCCChhhhHhHhhhhhcCCcccHHHHHHHHHHHhhhcchhHhHHHHHhhhcccCCcchHHHHHHHHHhCChhHHHHH
Q 000081 961 TPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREI 1040 (2362)
Q Consensus 961 ~~~e~Ppe~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L~~~y~~WFA~YLV~kRasiEPN~H~LYl~fLd~l~~~~L~~~V 1040 (2362)
..+|+|||+|+|||+|||||+|++|+++|++|+|++|+++||+|||+|||++|||+|||||+||++|+++++++.|+++|
T Consensus 25 ~~~e~P~~~v~dki~Fi~NNls~~Nl~~k~~el~~~l~~~y~~WFA~YLV~~Ra~~EpN~H~lY~~~l~~l~~~~L~~~v 104 (249)
T 4b89_A 25 INQEGAPKDVVEKVLFVLNNVTLANLNNKVDELKKSLTPNYFSWFSTYLVTQRAKTEPNYHDLYSKVIVAMGSGLLHQFM 104 (249)
T ss_dssp SCCCCCCHHHHHHHHHHHHHCCTTTHHHHHHHHHHHCCGGGHHHHHHHHHHHTTTTCGGGHHHHHHHHHHHTCHHHHHHH
T ss_pred ccCCCcCHHHHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccHHHHHHHHHHhCCHHHHHHH
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcchhhccChHHHHHHHHhhhhhhhhhhhcCcccccCCCChhhHHHHHHhcCceEEEechhhhcccccC
Q 000081 1041 VQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQ 1120 (2362)
Q Consensus 1041 l~eTy~~i~~LL~Se~~~~ss~eRslLKNLGsWLG~iTLarNkPI~~k~ld~K~LLlEaY~~g~Li~VIPFVcKVLe~~~ 1120 (2362)
+++||++|++||+++++ +++||++|||||+|||+|||||||||+||+||+|+||+|||++|||.+|||||||||++|+
T Consensus 105 l~~T~~~i~~LL~~~~i--~~~eRs~LKNLG~WLG~iTLarNkPI~~~~ld~K~LL~eay~~g~L~~vIPFVcKvLe~~k 182 (249)
T 4b89_A 105 VNVTLRQLFVLLSTKDE--QAIDKKHLKNLASWLGCITLALNKPIKHKNIAFREMLIEAYKENRLEIVVPFVTKILQRAS 182 (249)
T ss_dssp HHHHHHHHHHHHTBSCG--GGSCHHHHHHHHHHHHHHTGGGTCCCCTTTBCHHHHHHHHHHHTCHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHhhhccc--ChHHHHHHHHHHHHHhHHHHhcCCCchhcccCHHHHHHHHHHcCCeEEEeeHHHHHHHhcc
Confidence 99999999999999876 4789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccHHHHHHHHHHHhcCCcccchhHHHHHHHHhhcCCCcccccccccccchhh
Q 000081 1121 SSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR 1181 (2362)
Q Consensus 1121 ~SkVFkPPNPWtm~IL~lL~Ely~~~~LKLnLKFEIEVL~K~L~ldl~dieps~~L~~r~~ 1181 (2362)
+|+||||||||||+||++|+|||++|+||+|||||||||||+|++|++||+||++|+++++
T Consensus 183 ~SkiFkPPNPWt~~IL~lL~Ely~~~~LKlnlkFEIEvL~k~l~l~l~~i~ps~~l~~~~~ 243 (249)
T 4b89_A 183 ESKIFKPPNPWTVGILKLLIELNEKANWKLSLTFEVEVLLKSFNLTTKSLKPSNFINTPEV 243 (249)
T ss_dssp TCSSSSTTCHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCCGGGSCCCCCC-----
T ss_pred cCCccCCCCchHHHHHHHHHHHHhCcchhHhHHHHHHHHHHHcCCChHhCCcccccCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999998765
No 3
>4b8b_A General negative regulator of transcription subun; 2.80A {Saccharomyces cerevisiae S288C}
Probab=100.00 E-value=1.9e-78 Score=753.46 Aligned_cols=481 Identities=21% Similarity=0.333 Sum_probs=376.8
Q ss_pred HHHHHHHhhCC-CCCHHHHHHhc-----CCCCCCCCChhhHHHHHHHHhhhcCCCccccccccCccc-CchhhHHHHHHH
Q 000081 314 VLVKAIKQLAP-NTNWIRVVENL-----DYEGFYIPTEEAFSFFMSVYKYACQEPFPLHAVCGSVWK-NTEGQLSFLRYA 386 (2362)
Q Consensus 314 vlv~alk~~~p-~lnW~~Vi~~l-----D~~~f~i~d~~~l~ll~~~~~~~~~~~fpi~~l~~~~W~-N~~~Qlsfl~~~ 386 (2362)
-+-.+++.+.. ++||.+|+..+ |. .-.-|+..++.-+++++..+ =+|+.++...|. .=.-.|.++-|-
T Consensus 89 q~~~~~~~~~~~~inW~~vFnlms~~~f~~-~~~~pt~asls~~~~~L~~~----~liD~F~~~dw~~~f~~~l~~~L~~ 163 (603)
T 4b8b_A 89 VIARSISSLQANQINWNRVFNLMSTKYFLS-APLMPTTASLSCLFAALHDG----PVIDEFFSCDWKVIFKLDLAIQLHK 163 (603)
T ss_dssp HHHHHHHTSCGGGSCHHHHHHHHHHSCCC----CCCCHHHHHHHHHHHCSH----HHHHHHHHSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHhccccccCHHHHHHHHHHHHHhc-CCCCccHHHHHHHHHHcCCC----chHHHHHcCcchHhHhHHHHHHHHh
Confidence 34466777755 89999999875 33 22446667777788877743 456666655664 344455555555
Q ss_pred hhCCCcccccCcCc-cccccccCCCCccccccccccccc---hHHHHHHHHH---hhhcCchHHHHHHhhhhhhcChhHH
Q 000081 387 VASPPEVFTFAHSA-RQLPYVDAVPGLKLQSGQANHAWL---CLDLLDVLCQ---LSEMGHASFARSMLEYPLKQCPEML 459 (2362)
Q Consensus 387 l~~p~~~f~f~~~~-~~~~~~d~~~~~~~~~~~~~~~W~---sldl~e~L~~---Lae~~~~~~v~~l~~~p~~~~pe~l 459 (2362)
.+.--.-||+..++ -+.++- ..++.+ ...=.+. +||+ +.+.. ++++..-....+.|+.-.+..||.+
T Consensus 164 ~~~~qg~~dl~~~~~~~~~~~-~~p~~~----~~ll~~~si~~l~l-~~~~~~~~~~~~~~~~~~~~~f~~d~~~~Peyl 237 (603)
T 4b8b_A 164 WSVQNGCFDLLNAEGTRKVSE-TIPNTK----QSLLYLLSIASLNL-ELFLQREELSDGPMLAYFQECFFEDFNYAPEYL 237 (603)
T ss_dssp CCTTTTCCCGGGCTTCCBSCS-SSCCCS----CCGGGBHHHHHHHH-HHHHTTTTSCCCHHHHHHHHHHHHHHHHCHHHH
T ss_pred cCccCCchhhhcCCCceeccc-CCCCcc----cceeeeeehhhhhH-HHHHHHHHhccchhHHHHHHHHhhhhccCHHHH
Confidence 54323346666666 333342 222211 0111122 3333 22221 2222123456789999999999999
Q ss_pred HHHhhccCcch------hHHHHHHHHHhhHHHHcCCCchH-HHHHHhhhCchhHHHHHHHhhhcCCccHHHHHHHHHHhh
Q 000081 460 LLGMAHINTAY------NLIQYEVSFAVFPMIIKSTMSNG-MILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELK 532 (2362)
Q Consensus 460 llgl~~i~~~~------~~l~~ell~~lf~~fl~~~~~~~-vi~~lW~~~~~~~~~~l~d~y~~d~~~l~rIldvaqelk 532 (2362)
.+++..-.+.| ..+.+|++-.||-..+...+.+. -+.+.+. ++.-++......+++|+.+++|++|||+|+|
T Consensus 238 al~~~~~~k~~~~~~en~~~i~~l~~~l~~~~~~~~~~~l~~~i~~~~-~~~k~~~~~~~Ii~kD~~~l~rildi~~elk 316 (603)
T 4b8b_A 238 ILALVKEMKRFVLLIENRTVIDEILITLLIQVHNKSPSSFKDVISTIT-DDSKIVDAAKIIINSDDAPIANFLKSLLDTG 316 (603)
T ss_dssp HHHHHHTHHHHHHHHCCHHHHHHHHHHHHHHHHHSCGGGHHHHHHHCC-CHHHHHHHHHHHHHHSCSCCSHHHHHHHHTT
T ss_pred HHHHHhhccccccccccchHHHHHHHHHHHHHHhcChHHHHHHHHHcc-ChhHHHHHHHHHHhcCchhHHHHHHHHHHhC
Confidence 77776544444 45667888888877665443332 3334444 4455558888889999999999999999999
Q ss_pred hHHHHhhcCCchhHHHHHHHhhcccccCHHHHHHHHhhcCcchHHHHHHHHHHHHhhcccccccCCCCCCCccccccccc
Q 000081 533 ILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYME 612 (2362)
Q Consensus 533 ~L~~lL~~~pf~faidLA~lAsrre~L~LekWL~~~l~~~~~~F~~a~l~FL~~k~~~~~~~~~~~~~~~~~~~~~L~~~ 612 (2362)
||+.||+..||+||+|+|++||||||+|||+|++++++.+|.+ +|++||+.|+..+. +.. +.++..+|.++
T Consensus 317 ~L~~lL~~~p~~faldLAalAs~rg~lnLe~WL~~~l~~~~~~---~lL~FL~~K~~~e~----~~~--~~~~~~~L~i~ 387 (603)
T 4b8b_A 317 RLDTVINKLPFNEAFKILPCARQIGWEGFDTFLKTKVSPSNVD---VVLESLEVQTKMTD----TNT--PFRSLKTFDLF 387 (603)
T ss_dssp CHHHHHHHSCTTHHHHTHHHHHHHTCCCHHHHHHHHCCTTTHH---HHHHHHHHHHHCCC----C----CSCTTTSCCHH
T ss_pred hHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHhhcCch---HHHHHHHHHhhccc----cCC--CCCCCceecHH
Confidence 9999999999999999999999999999999999999999976 99999999997651 111 22234568889
Q ss_pred hHHHHHHHHHhhhCCCCcHHHHHHHHHHHHHhhccCCCCCCCC-CCCC-----CCCCCChhhHHHHHHHHHHHhhccCCC
Q 000081 613 KIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGE-AADS-----STSEGYADDIEAEANSYFHQMFSGQLT 686 (2362)
Q Consensus 613 tv~~lL~~L~~~~~~~~s~~l~e~l~~~~~~~i~~~PrL~n~~-~~d~-----~~~~~~~~dVE~Ean~yfqkmYs~eis 686 (2362)
|+++||++|++. .++++..|+++++|+.|+++||||+|++ |+|+ +.++.||+|||+|||+||||||++++|
T Consensus 388 tv~~lLk~L~~~---~l~~e~~e~l~~vq~~~lq~yPRLiN~G~G~D~~i~an~~~~~~~~dIE~ean~yfqkmY~~eis 464 (603)
T 4b8b_A 388 AFHSLIEVLNKC---PLDVLQLQRFESLEFSLLIAFPRLINFGFGHDEAILANGDIAGINNDIEKEMQNYLQKMYSGELA 464 (603)
T ss_dssp HHHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHCGGGTTTTSSCHHHHHTTCSSSCCCHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHhCchhhcCCCcchhhhhccCCCCCCCHHHHHHHHHHHHHHHcCCCC
Confidence 999999999864 4577889999999999999999999986 5654 466789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccchhHHHHHHhhhhhhccCCCCcHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHhcCC
Q 000081 687 IEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKP 766 (2362)
Q Consensus 687 I~~iV~~L~r~K~S~~~rdqdvFaCMih~LFdEYrFF~~YP~~eL~~TAvLFG~lI~~~Lv~~~~L~iALr~ILeAlrkp 766 (2362)
|+++|++|+|||+|+++||||||+||||+||||||||++||++||++||+|||+||+|+||++.+|++||||||||+|+|
T Consensus 465 I~~iV~~L~~~K~S~~~rdqdvFaCMIh~LFdEyrff~~YP~~eL~iTA~LFG~LI~~~Ll~~~~L~iALr~ILeAlrkp 544 (603)
T 4b8b_A 465 IKDVIELLRRLRDSDLPRDQEVFTCITHAVIAESTFFQDYPLDALATTSVLFGSMILFQLLRGFVLDVAFRIIMRFAKEP 544 (603)
T ss_dssp HHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHGGGGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcccCcchHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHhhhhhhHHHHHHh-cccccccccHHHHHHHHHHHHh
Q 000081 767 ADSKMFVFGTKALEQFVDRLIEWPQYCNHIL-QISHLRSTHAELVAFIERALAR 819 (2362)
Q Consensus 767 ~~SkMf~FGiqAL~qF~~RL~EwPqyC~~Ll-~Ip~L~~t~p~l~~~ie~~l~~ 819 (2362)
++||||+||++||+||++||+||||||++|+ +|||| +++|++|+.|+++...
T Consensus 545 ~~skmf~FGi~ALeqF~~RL~ewPqyc~~lL~~ip~l-q~~P~l~q~i~~~a~~ 597 (603)
T 4b8b_A 545 PESKMFKFAVQAIYAFRIRLAEYPQYCKDLLRDVPAL-KSQAQVYQSIVEAATL 597 (603)
T ss_dssp TTSHHHHHHHHHHHHTGGGGGGCHHHHHHHHHHCGGG-GGCHHHHHHHHHTTC-
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCc-ccChHHHHHHHHHHcC
Confidence 9999999999999999999999999997766 79999 5899999999887653
No 4
>3rk6_A Polyadenylate-binding protein-interacting protein; heat fold, PABP, EIF4A, EIF3, translation regulator; 2.00A {Homo sapiens}
Probab=72.24 E-value=7.8 Score=45.30 Aligned_cols=188 Identities=16% Similarity=0.212 Sum_probs=111.4
Q ss_pred ChhhhHhHhhhhhcCC--cccHHHHHHHHHHHhh-----hcchhHhHHHHHhhhcccCCcchHHHHHHHHHhCCh-----
Q 000081 967 ASEVQDKISFIINNIS--ALNVEAKAKEFTEILK-----EQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSK----- 1034 (2362)
Q Consensus 967 pe~vqDKI~FIiNNlS--~~Nl~~K~~Elk~~L~-----~~y~~WFA~YLV~kRasiEPN~H~LYl~fLd~l~~~----- 1034 (2362)
++++..||..|+|-|| ++|++.-++++.+.+. ++...-+..- |.+.|-.||||-.+|.++...+..+
T Consensus 16 ~~~l~r~v~~iLNkLT~~p~~f~~l~~~i~~~~~~~~~~~~~L~~vi~l-IfekAi~ep~fs~~YA~LC~~l~~~l~~~~ 94 (234)
T 3rk6_A 16 GSTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVEL-IYQQATSIPNFSYMGARLCNYLSHHLTISP 94 (234)
T ss_dssp --CHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCSHHHHHHHHHH-HHHHHHSSTTCHHHHHHHHHHHHHHCCCCC
T ss_pred hHHHHHHHHHHHHHccCChhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH-HHHHHHhCcccHHHHHHHHHHHHHhcCCCC
Confidence 5789999999999999 9999999999888753 2344455554 4455889999999999999988652
Q ss_pred h---HHHHHH---HHHHHHHHHHhcchhhccChHHHHHHHHhhhhhhhhhhhcC------cccccCCC--ChhhHHHHHH
Q 000081 1035 A---LNREIV---QATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRN------QVLRAREI--DPKSLIIEAY 1100 (2362)
Q Consensus 1035 ~---L~~~Vl---~eTy~~i~~LL~Se~~~~ss~eRslLKNLGsWLG~iTLarN------kPI~~k~l--d~K~LLlEaY 1100 (2362)
. +-+..| ++.|++-...... +...|...-+.--++|-+-.-.+ +++..+-+ .+++||-.-.
T Consensus 95 ~~~~Fr~lLL~rcQ~eFe~~~~~~~~-----d~~~k~r~lg~i~FIgELf~~l~~~~~~~~~l~e~I~~~ci~~Ll~~l~ 169 (234)
T 3rk6_A 95 QSGNFRQLLLQRCRTEYEVKDQAAKG-----DEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALF 169 (234)
T ss_dssp TTCCHHHHHHHHHHHHHTTHHHHTSS-----CHHHHHHHHHHHHHHHHHHHHCCEECTTSSEECCHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhhHHhhhc-----cHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHhcc
Confidence 1 333333 2334433322222 21223322233336777765422 34432211 3565554322
Q ss_pred hcCceEEEechhhhcccccCCCcc---ccCCCccHHHHHHHHHHHhcCCcccchhHHHHHHHHh
Q 000081 1101 EKGLMIAVIPFTSKILEPCQSSLA---YQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFK 1161 (2362)
Q Consensus 1101 ~~g~Li~VIPFVcKVLe~~~~SkV---FkPPNPWtm~IL~lL~Ely~~~~LKLnLKFEIEVL~K 1161 (2362)
++ --.--|-.+|++|..|.+.-= +.--.++.-.++.-|.++.+.+++--..+|=|+.|+.
T Consensus 170 ~~-p~ee~vE~l~~lL~tvG~~Ld~~~~~~~~~~md~~f~rl~~i~~~~~ls~Rirfml~dlie 232 (234)
T 3rk6_A 170 SN-PMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVE 232 (234)
T ss_dssp HS-CCHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred CC-CChHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 21 111123344555543321100 0011268888999999999989999999999998864
No 5
>2vso_E Eukaryotic initiation factor 4F subunit P150; acetylation, ATP-binding, phosphoprotein, protein biosynthesis, translation regulation; HET: AMP; 2.6A {Saccharomyces cerevisiae} PDB: 2vsx_E*
Probab=66.79 E-value=13 Score=44.54 Aligned_cols=194 Identities=13% Similarity=0.133 Sum_probs=110.1
Q ss_pred CCChhhhHhHhhhhhcCCcccHHHHHHHHHHHhhhc-------chhHhHHHHHhhhcccCCcchHHHHHHHHHhCCh---
Q 000081 965 APASEVQDKISFIINNISALNVEAKAKEFTEILKEQ-------YYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSK--- 1034 (2362)
Q Consensus 965 ~Ppe~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L~~~-------y~~WFA~YLV~kRasiEPN~H~LYl~fLd~l~~~--- 1034 (2362)
...+++.-||.-|+|-||++|++.=+.+|.++-... -..=+. =+|.+.|-.||+|=.+|.+|+..|...
T Consensus 31 ~~~e~l~r~vkgiLNKLT~~nf~~i~~ql~~~~~~~~~~~~~~~l~~vi-~~If~kA~~ep~fs~~YA~Lc~~l~~~l~~ 109 (284)
T 2vso_E 31 LDKDEVERKMKSLLNKLTLEMFDAISSEILAIANISVWETNGETLKAVI-EQIFLKACDEPHWSSMYAQLCGKVVKELNP 109 (284)
T ss_dssp CCHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHGGGGCSBCHHHHHHH-HHHHHHHHHCGGGHHHHHHHHHHHHHHSCT
T ss_pred ccHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhccccCcHHHHHHHH-HHHHHHHHcCcchHHHHHHHHHHHHHhcCc
Confidence 456889999999999999999999999998875321 111133 256778999999999999999887532
Q ss_pred -------------hHH-HHHHHHHHHHHHHHhcchhhcc-------------C-----hHHHHHHHHhhhhhhhhhhhcC
Q 000081 1035 -------------ALN-REIVQATYENCKVLLGSELIKS-------------S-----SEERSLLKNLGSWLGKLTIGRN 1082 (2362)
Q Consensus 1035 -------------~L~-~~Vl~eTy~~i~~LL~Se~~~~-------------s-----s~eRslLKNLGsWLG~iTLarN 1082 (2362)
.++ +.+|+..-..-.... .++... . ...|..--|+-.++|-+-.-+=
T Consensus 110 ~i~~e~~~~k~g~~~Fr~~LL~rcq~eFe~~~-~~~~~~~~~~~~~e~e~~~~e~~~~~~~k~r~lg~i~FIgeLyk~~~ 188 (284)
T 2vso_E 110 DITDETNEGKTGPKLVLHYLVARCHAEFDKGW-TDKLPTNEDGTPLEPEMMSEEYYAAASAKRRGLGLVRFIGFLYRLNL 188 (284)
T ss_dssp TCCBCC---CCTHHHHHHHHHHHHHHHHHHCC-CSSCC------------CCTTHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHhhhh-hhhhhhccccchhhhhhhhhHHHHHHHHHHHHhhHHHHHHHHHhccC
Confidence 122 233322111111111 111000 0 0111222233356665543211
Q ss_pred cccccCCCChhhHHHHHHhcCceEEEechhhhcccccCCCccccCC---------CccHHHHHHHHHHHhcCCcccchhH
Q 000081 1083 QVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPP---------NPWTMAILGLLAEIYSMPNLKMNLK 1153 (2362)
Q Consensus 1083 kPI~~k~ld~K~LLlEaY~~g~Li~VIPFVcKVLe~~~~SkVFkPP---------NPWtm~IL~lL~Ely~~~~LKLnLK 1153 (2362)
-+-+.=.-.++.|| +.+...-=.--|=.+|++|..|...-=--+| -+..-.++.-|.++-+.+++---++
T Consensus 189 l~~~i~~~ci~~LL-~~~~~~p~e~~iE~l~~lL~tvG~~Ld~~~~~~~~~~~~~~~~md~~f~~l~~l~~~~~ls~Rir 267 (284)
T 2vso_E 189 LTGKMMFECFRRLM-KDLTDSPSEETLESVVELLNTVGEQFETDSFRTGQATLEGSQLLDSLFGILDNIIQTAKISSRIK 267 (284)
T ss_dssp SCHHHHHHHHHHHH-HHHHSCCCHHHHHHHHHHHHHHHHHHTSCC--------CHHHHHHHHHHHHHHHHTTSCCCHHHH
T ss_pred CcHHHHHHHHHHHh-ccCCCCCCHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 11000011244444 3332111122355678888776554222222 2578889999999988888888899
Q ss_pred HHHHHHHh
Q 000081 1154 FDIEVLFK 1161 (2362)
Q Consensus 1154 FEIEVL~K 1161 (2362)
|=||.++.
T Consensus 268 Fml~dlid 275 (284)
T 2vso_E 268 FKLIDIKE 275 (284)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998874
No 6
>1hu3_A EIF4GII; heat repeat, translation; 2.37A {Homo sapiens} SCOP: a.118.1.14
Probab=55.02 E-value=14 Score=43.57 Aligned_cols=187 Identities=15% Similarity=0.151 Sum_probs=107.3
Q ss_pred hhhhHhHhhhhhcCCcccHHHHHHHHHHHhh--hcchhHhHHHHHhhhcccCCcchHHHHHHHHHhCC---hh-------
Q 000081 968 SEVQDKISFIINNISALNVEAKAKEFTEILK--EQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNS---KA------- 1035 (2362)
Q Consensus 968 e~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L~--~~y~~WFA~YLV~kRasiEPN~H~LYl~fLd~l~~---~~------- 1035 (2362)
+.+..+|.-++|-||++|++.=+.++.++-- ++-..=+ --+|.++|-.||+|=.+|.+|+..|.. |.
T Consensus 9 ~~l~r~v~giLNKLT~~nf~~i~~ql~~~~i~~~~~l~~v-i~~if~kA~~ep~f~~~YA~Lc~~L~~~~~p~~~~~~~~ 87 (260)
T 1hu3_A 9 QELFRKVRSILNKLTPQMFNQLMKQVSGLTVDTEERLKGV-IDLVFEKAIDEPSFSVAYANMCRCLVTLKVPMADKPGNT 87 (260)
T ss_dssp HHHHHHHHHHHTCSSCCCHHHHHHHHTTCCCCSHHHHHHH-HHHHHHHHHHCGGGHHHHHHHHHHHTTCCCC--------
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHHHHHH-HHHHHHHHHcCchHHHHHHHHHHHHHHhhCCcccCCccc
Confidence 6788999999999999999998888765311 1111112 136888999999999999999999975 11
Q ss_pred --HHHHHH---HHHHHHHHHHhc--chhhc-----cChHHH---------------HHHHHhhhhhhhhhhhcCcccccC
Q 000081 1036 --LNREIV---QATYENCKVLLG--SELIK-----SSSEER---------------SLLKNLGSWLGKLTIGRNQVLRAR 1088 (2362)
Q Consensus 1036 --L~~~Vl---~eTy~~i~~LL~--Se~~~-----~ss~eR---------------slLKNLGsWLG~iTLarNkPI~~k 1088 (2362)
+-+.+| ++.|++...-.. .++.+ ..+.|| ..--|+-.++|-+-.-+=-+-+.=
T Consensus 88 ~~Fr~~LL~rcq~eFe~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~e~ee~~~~~k~r~lg~i~FIgeLy~~~~l~~~i~ 167 (260)
T 1hu3_A 88 VNFRKLLLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERTRLHDELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIM 167 (260)
T ss_dssp -CHHHHHHHHHHHHHHHHTC------------------------------CCSSHHHHHHHHHHHHHHHHTTTCSCHHHH
T ss_pred hHHHHHHHHHHHHHHhcccchhhhHHHHhhhhcccCCHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHhcCCCCHHHH
Confidence 223333 223333211000 00000 112222 222355667777664321111100
Q ss_pred CCChhhHHHHHHhcCceEEEechhhhcccccCCCccccC-CCccHHHHHHHHHHHhcCCcccchhHHHHHHHHh
Q 000081 1089 EIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQP-PNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFK 1161 (2362)
Q Consensus 1089 ~ld~K~LLlEaY~~g~Li~VIPFVcKVLe~~~~SkVFkP-PNPWtm~IL~lL~Ely~~~~LKLnLKFEIEVL~K 1161 (2362)
.-.++.|| +..+.. -|=.+|++|..|...- .++ +.+.+-.++.-|.++-+.+++---.+|=||.++.
T Consensus 168 ~~~l~~Ll-~~~~e~----~iE~l~~lL~tvG~~L-~~~~~~~~l~~~f~~l~~~~~~~~ls~Rirfmi~~l~d 235 (260)
T 1hu3_A 168 HDCVVKLL-KNHDEE----SLECLCRLLTTIGKDL-DFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVID 235 (260)
T ss_dssp HHHHHHHH-HSCSHH----HHHHHHHHHHHHHHHH-CCTTTHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHh-CCCCHH----HHHHHHHHHHHHHHHH-hCcccHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 11223333 211111 3456788888876553 333 3367888899999988888888889999999875
No 7
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=26.31 E-value=2.6e+02 Score=30.74 Aligned_cols=89 Identities=9% Similarity=0.181 Sum_probs=68.0
Q ss_pred hhhHHHHHHHHHHHhhccCCCHHHHHHHHHHhhcCCCcccchhHHHHHHhhhhhhccCCCCcHHHHHHHHHHHHHhhhhh
Q 000081 666 ADDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQ 745 (2362)
Q Consensus 666 ~~dVE~Ean~yfqkmYs~eisI~~iV~~L~r~K~S~~~rdqdvFaCMih~LFdEYrFF~~YP~~eL~~TAvLFG~lI~~~ 745 (2362)
.+++++++++..+..|+.. .++|.+.-++.++... .-..+-...|..-||. + ++|=..+++|+-.|.. +
T Consensus 6 ~ee~~kk~~~ii~EYf~~~-D~~Ea~~~l~eL~~p~--~~~~~V~~~I~~aldr-k------~~ere~~s~LL~~L~~-~ 74 (165)
T 2rg8_A 6 ERAFEKTLTPIIQEYFEHG-DTNEVAEMLRDLNLGE--MKSGVPVLAVSLALEG-K------ASHREMTSKLLSDLCG-T 74 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHTCSG--GGGHHHHHHHHHHHTS-C------HHHHHHHHHHHHHHBT-T
T ss_pred HHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHhCCcc--cHHHHHHHHHHHHHcC-C------HHHHHHHHHHHHHHHH-C
Confidence 4688999999888888864 6899999999988432 3344545555555554 2 4555569999999965 9
Q ss_pred ccchhHHHHHHHHHHHHhcC
Q 000081 746 LVTHLTLGIALRGVLDALRK 765 (2362)
Q Consensus 746 Lv~~~~L~iALr~ILeAlrk 765 (2362)
+++.-.+.-|+..+++.+-+
T Consensus 75 ~ls~~~i~~Gf~~lle~ldD 94 (165)
T 2rg8_A 75 VMSTTDVEKSFDKLLKDLPE 94 (165)
T ss_dssp TBCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhChh
Confidence 99999999999999988764
No 8
>1uw4_B UPF2, regulator of nonsense transcripts 2; nonsense mediated mRNA decay protein, RNA-binding protein, N domain, MIF4G domain; 1.95A {Homo sapiens} SCOP: a.118.1.14
Probab=21.30 E-value=1.9e+02 Score=34.03 Aligned_cols=124 Identities=15% Similarity=0.183 Sum_probs=74.4
Q ss_pred HHHHH-HhhhhhchHHHHHHHHHHHhhccchhhHHHHhhhcccccCCCCCCCchHHHHHHHHHHHhhcC-CCccchhhhh
Q 000081 12 IRFLL-QSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVASVFKYIMDK-PNFSTVFSQS 89 (2362)
Q Consensus 12 i~~l~-~~~~~~n~~~~~~el~~~~~~g~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ll~~~~~~~l~k-p~f~t~~c~A 89 (2362)
||.|+ ..|+|+|++.+...|-++==.-.+-+-++++| |..+-- . .+..+.++|.+++.+-.. |.|+. .-
T Consensus 8 ir~Li~~~L~~~~~~~vlk~lrKl~W~D~e~~~~l~k~-l~~~~~----~-ky~nI~~lA~ll~~L~~~~~~~~i---~v 78 (248)
T 1uw4_B 8 VRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICC-MINIWN----V-KYNSIHCVANLLAGLVLYQEDVGI---HV 78 (248)
T ss_dssp HHHHHHTTCSTTSHHHHHHHHHTSCTTSHHHHHHHHHH-HHCGGG----S-CGGGHHHHHHHHHHHTTTCHHHHH---HH
T ss_pred HHHHHHHHcccccHHHHHHHHHcCCCCcHHHHHHHHHH-hcchhh----c-ccchHHHHHHHHHHHHhhChHHhh---hh
Confidence 78899 99999999999988866531112222344444 443311 1 255789999998887654 44332 22
Q ss_pred ccCcccCHHHHHHHHhhcCCCchhHHHHhhhhccCCChHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhcCc
Q 000081 90 VKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLDALMCGKNFCMAQIERLCANPVPMNSAEQIQNIIMFLQRSSD 169 (2362)
Q Consensus 90 ~~~~~~~~~~l~~l~~~L~ls~~q~v~~~lal~~s~n~~~~~~~~~f~~~~i~~l~~~~~~~~s~~~lh~il~~l~~~~g 169 (2362)
+| +. .|.|..||=.-+-....-|-.-.+| |-||. |+ ..++..+|.+.|+.|.. +|
T Consensus 79 VD------~v------------lE~Ir~gLE~n~~~~nQrRia~vky----LgELY-ny-~lv~s~vIf~~Ly~li~-fg 133 (248)
T 1uw4_B 79 VD------GV------------LEDIRLGMEVNQPKFNQRRISSAKF----LGELY-NY-RMVESAVIFRTLYSFTS-FG 133 (248)
T ss_dssp HH------HH------------HHHHHHHHHHCCGGGHHHHHHHHHH----HHHHH-HT-TSSCHHHHHHHHHHHHH-TT
T ss_pred HH------HH------------HHHHHHHHhcCcHHHHHHHHHHHHH----HHHHH-Hh-cCCChHHHHHHHHHHHc-CC
Confidence 22 22 3555555554443322222222233 56688 77 78999999999988764 55
No 9
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=20.36 E-value=3.5e+02 Score=29.34 Aligned_cols=90 Identities=12% Similarity=0.160 Sum_probs=69.0
Q ss_pred hhHHHHHHHHHHHhhccCCCHHHHHHHHHHhhcCCCcccchhHHHHHHhhhhhhccCCCCcHHHHHHHHHHHHHhhhhhc
Q 000081 667 DDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQL 746 (2362)
Q Consensus 667 ~dVE~Ean~yfqkmYs~eisI~~iV~~L~r~K~S~~~rdqdvFaCMih~LFdEYrFF~~YP~~eL~~TAvLFG~lI~~~L 746 (2362)
+++++++++..+..|+.. .++|.+.-++.++.. ..-.++-...|..-+|.- .+++-..++.|+-.+.+.++
T Consensus 6 eel~kki~~lL~EY~~~~-D~~EA~~cl~EL~~p--~f~~e~V~~~i~~alE~~------~~~~re~~~~LL~~L~~~~~ 76 (152)
T 2ion_A 6 NHLVKEIDMLLKEYLLSG-DISEAEHCLKELEVP--HFHHELVYEAIVMVLEST------GESAFKMILDLLKSLWKSST 76 (152)
T ss_dssp CHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHTCG--GGHHHHHHHHHHHHHHCC------SSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCC-CHHHHHHHHHHhCCC--cchHHHHHHHHHHHHcCC------ChHHHHHHHHHHHHHHHCCC
Confidence 578899999998888864 689999999999753 233444444444445521 34666779999999999999
Q ss_pred cchhHHHHHHHHHHHHhcC
Q 000081 747 VTHLTLGIALRGVLDALRK 765 (2362)
Q Consensus 747 v~~~~L~iALr~ILeAlrk 765 (2362)
|+.-.+.-|+.-|++.+-+
T Consensus 77 is~~q~~~Gf~~vl~~ldD 95 (152)
T 2ion_A 77 ITIDQMKRGYERIYNEIPD 95 (152)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhChH
Confidence 9999999999999988754
No 10
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=17.89 E-value=4.6e+02 Score=27.52 Aligned_cols=90 Identities=12% Similarity=0.160 Sum_probs=67.7
Q ss_pred hhHHHHHHHHHHHhhccCCCHHHHHHHHHHhhcCCCcccchhHHHHHHhhhhhhccCCCCcHHHHHHHHHHHHHhhhhhc
Q 000081 667 DDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQL 746 (2362)
Q Consensus 667 ~dVE~Ean~yfqkmYs~eisI~~iV~~L~r~K~S~~~rdqdvFaCMih~LFdEYrFF~~YP~~eL~~TAvLFG~lI~~~L 746 (2362)
+++++++++..+..|+.. .++|.+.-++.++.. ..-.++-...|..-+|.- .+++-..++.|+-.+.+.++
T Consensus 4 eel~kki~~ll~EY~~~~-D~~Ea~~cl~eL~~p--~f~~e~V~~~i~~alE~~------~~~~~e~~~~LL~~L~~~~~ 74 (129)
T 2nsz_A 4 NHLVKEIDMLLKEYLLSG-DISEAEHCLKELEVP--HFHHELVYEAIVMVLEST------GESAFKMILDLLKSLWKSST 74 (129)
T ss_dssp CHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHTCG--GGHHHHHHHHHHHHHHCC------SSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCC-CHHHHHHHHHHhCCC--ccHHHHHHHHHHHHHcCC------ChHHHHHHHHHHHHHHHCCC
Confidence 578899999888888864 689999999999743 223444444444444421 23555679999999999999
Q ss_pred cchhHHHHHHHHHHHHhcC
Q 000081 747 VTHLTLGIALRGVLDALRK 765 (2362)
Q Consensus 747 v~~~~L~iALr~ILeAlrk 765 (2362)
|+.-.+.-|+.-|++.+-+
T Consensus 75 is~~q~~~Gf~~v~~~l~D 93 (129)
T 2nsz_A 75 ITIDQMKRGYERIYNEIPD 93 (129)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhChH
Confidence 9999999999999988754
Done!