Query 000081
Match_columns 2362
No_of_seqs 211 out of 288
Neff 5.8
Searched_HMMs 13730
Date Mon Mar 25 13:46:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000081.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/000081hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hu3a_ a.118.1.14 (A:) Eukary 78.8 1.5 0.00011 48.1 7.6 185 968-1160 9-234 (243)
2 d1uw4b_ a.118.1.14 (B:) Regula 73.9 1.6 0.00011 48.7 5.9 190 968-1167 5-220 (248)
3 d1ug3a1 a.118.1.14 (A:1235-142 40.1 43 0.0031 35.1 9.7 89 667-765 7-95 (193)
4 d1h2vc1 a.118.1.14 (C:29-290) 26.4 82 0.0059 34.4 9.4 100 972-1078 1-107 (262)
5 d1iqpa1 a.80.1.1 (A:233-327) R 24.3 51 0.0037 30.5 6.1 62 8-72 3-65 (95)
6 d1sxjd1 a.80.1.1 (D:263-353) R 19.3 48 0.0035 30.4 4.6 59 10-70 4-62 (91)
7 d1paqa_ a.118.1.14 (A:) Transl 18.8 1.6E+02 0.011 29.6 9.1 95 669-763 2-100 (161)
8 d1ujka_ a.118.9.2 (A:) ADP-rib 17.0 4.5E+02 0.033 25.6 12.4 37 1881-1921 109-145 (145)
9 d2nsza1 a.118.1.14 (A:322-450) 15.6 2.5E+02 0.018 27.1 9.4 88 669-765 6-93 (129)
10 d1sxjc1 a.80.1.1 (C:239-333) R 15.2 1.1E+02 0.0078 28.0 6.1 45 8-53 2-47 (95)
No 1
>d1hu3a_ a.118.1.14 (A:) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.80 E-value=1.5 Score=48.14 Aligned_cols=185 Identities=11% Similarity=0.118 Sum_probs=111.4
Q ss_pred hhhhHhHhhhhhcCCcccHHHHHHHHHHHhh--hcchhHhHHHHHhhhcccCCcchHHHHHHHHHhCChh----------
Q 000081 968 SEVQDKISFIINNISALNVEAKAKEFTEILK--EQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKA---------- 1035 (2362)
Q Consensus 968 e~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L~--~~y~~WFA~YLV~kRasiEPN~H~LYl~fLd~l~~~~---------- 1035 (2362)
+++..+|..++|-||++|++.=.+|+.++-. ++-..=+++ +|.++|-.||+|=.+|.++...+....
T Consensus 9 ~~l~r~v~~lLNKLt~~n~~~i~~ei~~l~~~~~~~l~~~v~-~I~~kai~e~~f~~~YA~Lc~~l~~~~~~~~~~~~~~ 87 (243)
T d1hu3a_ 9 QELFRKVRSILNKLTPQMFNQLMKQVSGLTVDTEERLKGVID-LVFEKAIDEPSFSVAYANMCRCLVTLKVPMADKPGNT 87 (243)
T ss_dssp HHHHHHHHHHHTCSSCCCHHHHHHHHTTCCCCSHHHHHHHHH-HHHHHHHHCGGGHHHHHHHHHHHTTCCCC--------
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHccCHHHHHHHHH-HHHHHHHcCccccHHHHHHHHHHHHhcCccccccccc
Confidence 4567799999999999999999999987632 222222333 355779999999999999999987643
Q ss_pred --HHHHHHHHHHHHHHHHhcc-------------------------hhhccChHHHHHHHHhhhhhhhhhhhcCcccccC
Q 000081 1036 --LNREIVQATYENCKVLLGS-------------------------ELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAR 1088 (2362)
Q Consensus 1036 --L~~~Vl~eTy~~i~~LL~S-------------------------e~~~~ss~eRslLKNLGsWLG~iTLarNkPI~~k 1088 (2362)
+.+.+++.....-...... |........|....|+...+|.+..-+=-+.+.=
T Consensus 88 ~~F~~~Ll~~~q~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~k~~~~g~i~figeLy~~~~v~~~~i 167 (243)
T d1hu3a_ 88 VNFRKLLLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERTRLHDELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIM 167 (243)
T ss_dssp -CHHHHHHHHHHHHHHHHTC------------------------------CCSSHHHHHHHHHHHHHHHHTTTCSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhHhhhcccccccchHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHccccchHHHH
Confidence 3344444333322222110 0001112234555577778888775432222111
Q ss_pred CCChhhHHHHHHhcCceEEEechhhhcccccCCCccccCCCccH--HHHHHHHHHHhcCCcccchhHHHHHHHH
Q 000081 1089 EIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWT--MAILGLLAEIYSMPNLKMNLKFDIEVLF 1160 (2362)
Q Consensus 1089 ~ld~K~LLlEaY~~g~Li~VIPFVcKVLe~~~~SkVFkPPNPWt--m~IL~lL~Ely~~~~LKLnLKFEIEVL~ 1160 (2362)
.--++.|+ +.... --|-.+|.+|..|... +.-++|+. =.++.-|.++-..+++.--+||=|+-|+
T Consensus 168 ~~~l~~Ll-~~~~e----~~ie~l~~lL~~~G~~--L~~~~~~~~~~~~~~~l~~~~~~~~~s~Rirfml~~l~ 234 (243)
T d1hu3a_ 168 HDCVVKLL-KNHDE----ESLECLCRLLTTIGKD--LDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVI 234 (243)
T ss_dssp HHHHHHHH-HSCSH----HHHHHHHHHHHHHHHH--HCCTTTHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred HHHHHHhc-CCCCH----HHHHHHHHHHHHHHHH--HhccccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 11223332 22211 1255778888888754 34355553 3678888888888888888888887665
No 2
>d1uw4b_ a.118.1.14 (B:) Regulator of nonsense transcripts 2, UPF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.90 E-value=1.6 Score=48.70 Aligned_cols=190 Identities=11% Similarity=0.082 Sum_probs=122.6
Q ss_pred hhhhHhHhhhhhcCCcccHHHHHHHHHHHh--hhcchhHhHHHHHhhhcccCCcchHHHHHHHHHhC--ChhHHHHHHHH
Q 000081 968 SEVQDKISFIINNISALNVEAKAKEFTEIL--KEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVN--SKALNREIVQA 1043 (2362)
Q Consensus 968 e~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L--~~~y~~WFA~YLV~kRasiEPN~H~LYl~fLd~l~--~~~L~~~Vl~e 1043 (2362)
++.--|+ |.|.||+.|++.=+++++++= +++-..++...++. -+..+++|=.+|..++..|. .+.+-..++..
T Consensus 5 ~~flr~l--i~n~Ls~~n~~~i~~~i~kl~~~n~e~~~~li~~i~~-~~~~~~~~i~~yA~l~a~L~~~~~~f~~~~id~ 81 (248)
T d1uw4b_ 5 QEYVRKL--LYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMIN-IWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDG 81 (248)
T ss_dssp HHHHHHH--HHTTCSTTSHHHHHHHHHTSCTTSHHHHHHHHHHHHC-GGGSCGGGHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHH--HHhhCCHhHHHHHHHHHHHCCCCCHHHHHHHHHHHhh-hhcCchhHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3444554 689999999999888887763 24556778886664 59999999999999999995 45666777777
Q ss_pred HHHHHHHHhcchhhccChHHHHHHHHhhhhhhhhhhhcCcccccCCCChhhHHHHHHhcCce---------EEEechhhh
Q 000081 1044 TYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLM---------IAVIPFTSK 1114 (2362)
Q Consensus 1044 Ty~~i~~LL~Se~~~~ss~eRslLKNLGsWLG~iTLarNkPI~~k~ld~K~LLlEaY~~g~L---------i~VIPFVcK 1114 (2362)
+.+.++.-+..++. .++...-+.-.++|-+..-+=-+...-.=-+..||-.+++.+.- ..-|=.+|+
T Consensus 82 l~e~f~~~~e~~~~----~~~~r~~~~v~figeLy~~~~v~~~~i~~~l~~Ll~~~~~~~~~~~~~d~~~d~~rIe~l~~ 157 (248)
T d1uw4b_ 82 VLEDIRLGMEVNQP----KFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVCT 157 (248)
T ss_dssp HHHHHHHHHHHCCG----GGHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTTCCTTSCCCSSSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHhcCCCcccccccCCCCcchhHHHHHHH
Confidence 77777776654322 33333334458999888665555444333455666566665420 011557999
Q ss_pred cccccCCCccccCCCccHHHHHHHHH-------------HHhcCCcccchhHHHHHHHHhhcCCCc
Q 000081 1115 ILEPCQSSLAYQPPNPWTMAILGLLA-------------EIYSMPNLKMNLKFDIEVLFKNLGVDM 1167 (2362)
Q Consensus 1115 VLe~~~~SkVFkPPNPWtm~IL~lL~-------------Ely~~~~LKLnLKFEIEVL~K~L~ldl 1167 (2362)
+|+.|..+-- .++|...+-..+. ++-+...+-.-++|-|+-|+.-.+=++
T Consensus 158 lL~t~G~~l~---~~~~~~~l~~~~~~fq~y~~~~~~~~~~~~~~~lp~ri~f~i~dll~lr~~~w 220 (248)
T d1uw4b_ 158 ILDTCGQYFD---RGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLELLRPKI 220 (248)
T ss_dssp HHHHHGGGCS---SHHHHHHHHHHHHHHHHHHHHHHTSTTCCSSSCCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhHHhc---CccchhhHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhCCC
Confidence 9999987732 2333321111111 111234566788999999998776444
No 3
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.06 E-value=43 Score=35.14 Aligned_cols=89 Identities=8% Similarity=0.084 Sum_probs=65.9
Q ss_pred hhHHHHHHHHHHHhhccCCCHHHHHHHHHHhhcCCCcccchhHHHHHHhhhhhhccCCCCcHHHHHHHHHHHHHhhhhhc
Q 000081 667 DDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQL 746 (2362)
Q Consensus 667 ~dVE~Ean~yfqkmYs~eisI~~iV~~L~r~K~S~~~rdqdvFaCMih~LFdEYrFF~~YP~~eL~~TAvLFG~lI~~~L 746 (2362)
+|+++++++..+..|+. -.++|.+..++.++.. .-+ .++-.++|..-+| .-+++-..++.|+..|++.++
T Consensus 7 ee~~kk~~~il~Ey~~~-~D~~Ea~~~l~el~~p-~~~-~~~V~~~i~~~le-------~~~~~re~~~~Ll~~L~~~~~ 76 (193)
T d1ug3a1 7 EELEKKSKAIIEEYLHL-NDMKEAVQCVQELASP-SLL-FIFVRHGVESTLE-------RSAIAREHMGQLLHQLLCAGH 76 (193)
T ss_dssp HHHHHHHHHHHHHHHHH-CCHHHHHHHHHTTCCG-GGH-HHHHHHHHHHHTT-------TCHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhC-CCHHHHHHHHHHcCCc-hhH-HHHHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHCCC
Confidence 57888888888888875 3679999999988633 222 3333444444443 235566669999999999999
Q ss_pred cchhHHHHHHHHHHHHhcC
Q 000081 747 VTHLTLGIALRGVLDALRK 765 (2362)
Q Consensus 747 v~~~~L~iALr~ILeAlrk 765 (2362)
|+.-.+.-|+.-+++.+.+
T Consensus 77 is~~~~~~gf~~~l~~l~D 95 (193)
T d1ug3a1 77 LSTAQYYQGLYEILELAED 95 (193)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhh
Confidence 9999999999999988765
No 4
>d1h2vc1 a.118.1.14 (C:29-290) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.40 E-value=82 Score=34.45 Aligned_cols=100 Identities=16% Similarity=0.207 Sum_probs=73.8
Q ss_pred HhHhhhhhcCCc---ccHHHHHHHHHHHhhhcch--hHhHHHHHhhhcccCCcchHHHHHHHHHhC--ChhHHHHHHHHH
Q 000081 972 DKISFIINNISA---LNVEAKAKEFTEILKEQYY--PWFAQYMVMKRASIEPNFHDLYLKFLDKVN--SKALNREIVQAT 1044 (2362)
Q Consensus 972 DKI~FIiNNlS~---~Nl~~K~~Elk~~L~~~y~--~WFA~YLV~kRasiEPN~H~LYl~fLd~l~--~~~L~~~Vl~eT 1044 (2362)
||+-.+||-|++ .++++.++++.+.+.++.- +.---=.+++-+...|.+-.+|..++--+| ++++=+++++.+
T Consensus 1 drl~~LI~rige~~~~s~~~~ie~L~~~l~~~l~~~~~~il~~l~~~~~~~P~k~~~yA~Lv~llN~~~~e~g~~~l~~~ 80 (262)
T d1h2vc1 1 DHLESLICKVGEKSACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAM 80 (262)
T ss_dssp CHHHHHHHTTTSSCSSCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 567777887754 5667778888777776532 222222456778889999999999988776 456888999999
Q ss_pred HHHHHHHhcchhhccChHHHHHHHHhhhhhhhhh
Q 000081 1045 YENCKVLLGSELIKSSSEERSLLKNLGSWLGKLT 1078 (2362)
Q Consensus 1045 y~~i~~LL~Se~~~~ss~eRslLKNLGsWLG~iT 1078 (2362)
.++.+..+++. +..-.||+-.+||.+.
T Consensus 81 ~~~f~~~l~~~-------~~~~~~~llrFla~L~ 107 (262)
T d1h2vc1 81 IRQLKESLKAN-------NYNEAVYLVRFLSDLV 107 (262)
T ss_dssp HHHHHHHHHTT-------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-------CHHHHHHHHHHHHHHc
Confidence 99998888753 4667888888888874
No 5
>d1iqpa1 a.80.1.1 (A:233-327) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=24.34 E-value=51 Score=30.48 Aligned_cols=62 Identities=15% Similarity=0.227 Sum_probs=46.9
Q ss_pred cHHHHHHHHHhhhhhchHHHHHHHHHHH-hhccchhhHHHHhhhcccccCCCCCCCchHHHHHHHH
Q 000081 8 VPSQIRFLLQSLNEANADSVFRELCQFI-EYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVASV 72 (2362)
Q Consensus 8 ~~~qi~~l~~~~~~~n~~~~~~el~~~~-~~g~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ll~~~ 72 (2362)
-+..|+.+++.+.++||+.....+.+++ ++|+.+.- ++..+.+.+- ..+..+..|..++...
T Consensus 3 ~P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~d-Il~~l~~~v~--~~~~~~~~k~~ll~~l 65 (95)
T d1iqpa1 3 RPEDIREMMLLALKGNFLKAREKLREILLKQGLSGED-VLVQMHKEVF--NLPIEEPKKVLLADKI 65 (95)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHGG--GSSSCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHh--hcCCCHHHHHHHHHHH
Confidence 4678999999999999999999999985 79999985 6777766542 1235566666665543
No 6
>d1sxjd1 a.80.1.1 (D:263-353) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=19.34 E-value=48 Score=30.35 Aligned_cols=59 Identities=5% Similarity=0.130 Sum_probs=44.9
Q ss_pred HHHHHHHHhhhhhchHHHHHHHHHHHhhccchhhHHHHhhhcccccCCCCCCCchHHHHHH
Q 000081 10 SQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVA 70 (2362)
Q Consensus 10 ~qi~~l~~~~~~~n~~~~~~el~~~~~~g~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ll~ 70 (2362)
..|..++..+.++||+.....+..++..|..+.- ++..+.+.+-.. .+..+.+|..++.
T Consensus 4 ~~i~~il~~~~~~~f~~a~~~i~~l~~~Gys~~d-Il~~l~~~vv~~-~~i~~~~k~~i~~ 62 (91)
T d1sxjd1 4 DILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAAS-VVNQLHEYYITN-DNFDTNFKNQISW 62 (91)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHTSCCCTT-HHHHHHHHHHHC-SSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHhc-CCCCHHHHHHHHH
Confidence 4688999999999999999999999988999884 777777654222 2355666665544
No 7
>d1paqa_ a.118.1.14 (A:) Translation initiation factor eIF-2b epsilon {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=18.75 E-value=1.6e+02 Score=29.60 Aligned_cols=95 Identities=13% Similarity=0.120 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhhccCCCHHHHHHHHHHhhcCCCcccchhHHHHHHhhhhhhccCC----CCcHHHHHHHHHHHHHhhhh
Q 000081 669 IEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFP----KYPERQLRIAAVLFGSIIKH 744 (2362)
Q Consensus 669 VE~Ean~yfqkmYs~eisI~~iV~~L~r~K~S~~~rdqdvFaCMih~LFdEYrFF~----~YP~~eL~~TAvLFG~lI~~ 744 (2362)
..+|+-.-++|-+....++|.+|-.|+-+|-|-|--+.||=.|++..+.+--.-++ .=+.++++..=.=||.+++.
T Consensus 2 F~~Ev~~sl~r~~ee~~~~dn~iLElnslr~a~N~~~~dv~~av~~All~~i~~~~~~~~~~~~~~~~~~l~k~~~ll~~ 81 (161)
T d1paqa_ 2 FEKEGIATVERAMENNHDLDTALLELNTLRMSMNVTYHEVRIATITALLRRVYHFIATQTLGPKDAVVKVFNQWGLLFKR 81 (161)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHGGGGGG
T ss_pred hHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999998888876432221 11223333322335666666
Q ss_pred hccchhHHHHHHHHHHHHh
Q 000081 745 QLVTHLTLGIALRGVLDAL 763 (2362)
Q Consensus 745 ~Lv~~~~L~iALr~ILeAl 763 (2362)
-+-+.-...-+|..|.+.+
T Consensus 82 ~~~~~~~q~~~L~~lq~~c 100 (161)
T d1paqa_ 82 QAFDEEEYIDLMNIIMEKI 100 (161)
T ss_dssp TCCSHHHHHHHHHHHHHHH
T ss_pred HcCCcHHHHHHHHHHHHHH
Confidence 5544433334455555555
No 8
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.97 E-value=4.5e+02 Score=25.63 Aligned_cols=37 Identities=16% Similarity=0.314 Sum_probs=30.3
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHcCccC
Q 000081 1881 GFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLK 1921 (2362)
Q Consensus 1881 ~~~eq~~~lF~EWv~l~~~~~~~~~~~~~Fi~qL~~~giL~ 1921 (2362)
..++++-.++.+|-.-+ | +...+..--.+|..+||++
T Consensus 109 ~Vk~kil~li~~W~~~f--p--~~~~~~~~Y~~L~~~Gii~ 145 (145)
T d1ujka_ 109 KVKNKILELLYSWTVGL--P--EEVKIAEAYQMLKKQGIVK 145 (145)
T ss_dssp HHHHHHHHHHHHHHHHC--T--TCHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHC--C--CchHHHHHHHHHHHCCCcC
Confidence 46899999999998755 3 5677778888999999975
No 9
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.60 E-value=2.5e+02 Score=27.08 Aligned_cols=88 Identities=11% Similarity=0.143 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHhhccCCCHHHHHHHHHHhhcCCCcccchhHHHHHHhhhhhhccCCCCcHHHHHHHHHHHHHhhhhhccc
Q 000081 669 IEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVT 748 (2362)
Q Consensus 669 VE~Ean~yfqkmYs~eisI~~iV~~L~r~K~S~~~rdqdvFaCMih~LFdEYrFF~~YP~~eL~~TAvLFG~lI~~~Lv~ 748 (2362)
..+++++..+..++ .-.++|.+.-++.++ ++.-+..=|...+.++|- . =+.+.-..++.||..+...++|+
T Consensus 6 l~kk~~~ll~EY~~-~~D~~Ea~~~l~eL~-~p~~~~e~V~~~i~~ale-~------~~~~r~~~~~~Ll~~L~~~~~is 76 (129)
T d2nsza1 6 LVKEIDMLLKEYLL-SGDISEAEHCLKELE-VPHFHHELVYEAIVMVLE-S------TGESAFKMILDLLKSLWKSSTIT 76 (129)
T ss_dssp HHHHHHHHHHHHHH-HCCHHHHHHHHHHHT-CGGGHHHHHHHHHHHHHH-C------CSSHHHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHh-CCCHHHHHHHHHHcC-CchhhHHHHHHHHHHHHh-c------CCHHHHHHHHHHHHHHHHCCCCC
Confidence 45555555555554 335788888888886 333343334455555553 2 13333456899999999999999
Q ss_pred hhHHHHHHHHHHHHhcC
Q 000081 749 HLTLGIALRGVLDALRK 765 (2362)
Q Consensus 749 ~~~L~iALr~ILeAlrk 765 (2362)
.-.+..|+..+++.+.+
T Consensus 77 ~~~i~~Gf~~~l~~l~D 93 (129)
T d2nsza1 77 IDQMKRGYERIYNEIPD 93 (129)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcH
Confidence 99999999999987754
No 10
>d1sxjc1 a.80.1.1 (C:239-333) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=15.20 E-value=1.1e+02 Score=28.05 Aligned_cols=45 Identities=18% Similarity=0.256 Sum_probs=38.9
Q ss_pred cHHHHHHHHHhhhhhchHHHHHHHHHHH-hhccchhhHHHHhhhccc
Q 000081 8 VPSQIRFLLQSLNEANADSVFRELCQFI-EYGIEGSTMMLQTCMDHL 53 (2362)
Q Consensus 8 ~~~qi~~l~~~~~~~n~~~~~~el~~~~-~~g~~~~~~~l~~~~~~~ 53 (2362)
.+..|..+++.+.+++|+..+..+.+++ ++|+.+.- +++.+.+.+
T Consensus 2 ~P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~d-Il~~l~~~i 47 (95)
T d1sxjc1 2 RPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALID-LIEGIVKIL 47 (95)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTCCHHH-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHH
Confidence 4678999999999999999999999986 79999985 777777754
Done!