Your job contains 1 sequence.
>000087
MAQIERLCANPVPMNSAEQIQNIIMFLQRSSDLSKHVDSLMQILSLLQSKDHTQFVLNPV
LPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEMSMGDVMNELGYGCSADASQCKEIL
SLFTPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCSTMSDLPPLSSWNVDVLVK
AIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQEPFPLHAVCGSVWKNTE
GQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWLCLDLLDVLCQLSE
MGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILH
IWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKE
LVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVI
LKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYADDIEAEANSYF
HQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVL
FGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHIL
QISHLRSTHAELVAFIERALARISSGHLESDGASNPAAHQHVSSQATSGNGEVSGSGITQ
LGQQLSSQIQLQQRSESVVDDRHKVSAASSSDMKPLLSSIGQPSSVAPLGDTSSAQKLHN
AVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKISFI
INNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALN
REIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLII
EAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIE
VLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHVD
LPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQSQ
SPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSI
ATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQG
LTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSS
FFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLTSS
GDAAQASAYGLAGGQGNQGYSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVHIGA
ADGGILHNSESESVNAAFTPAATELYAADSTEPVKEPGASSQSLPSTAAPERIGSSILEP
SLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAVAQKVF
KGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSEL
LNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLAAKPG
SPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAYSHTTANREDYNIPESVDP
DPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVS
VAHCLSSEVINPGTLQSPQQSQSLSFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILT
VTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQP
LKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVR
FLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPN
LKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEA
ASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQ
DLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNR
PHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSMVSGWVP
DNTH
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000087
(2284 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040915-1 - symbol:cnot1 "CCR4-NOT transcrip... 1400 3.6e-307 5
UNIPROTKB|F1MHU9 - symbol:CNOT1 "Uncharacterized protein"... 1358 1.8e-303 6
UNIPROTKB|A5YKK6 - symbol:CNOT1 "CCR4-NOT transcription c... 1358 1.9e-303 6
UNIPROTKB|F1RFU3 - symbol:CNOT1 "Uncharacterized protein"... 1358 2.3e-303 6
MGI|MGI:2442402 - symbol:Cnot1 "CCR4-NOT transcription co... 1358 2.3e-303 6
UNIPROTKB|G3V7M0 - symbol:Cnot1 "RCG39079" species:10116 ... 1358 2.4e-303 6
DICTYBASE|DDB_G0276029 - symbol:DDB_G0276029 "putative CC... 1230 4.0e-300 5
UNIPROTKB|E1BXD4 - symbol:LOC100858397 "Uncharacterized p... 1362 3.9e-297 5
FB|FBgn0085436 - symbol:Not1 "Not1" species:7227 "Drosoph... 1358 3.5e-270 5
WB|WBGene00002845 - symbol:let-711 species:6239 "Caenorha... 1052 2.4e-194 4
ASPGD|ASPL0000078074 - symbol:AN4965 species:162425 "Emer... 765 1.1e-188 5
GENEDB_PFALCIPARUM|PF11_0049 - symbol:PF11_0049 "hypothet... 968 6.4e-187 7
UNIPROTKB|Q8IIW4 - symbol:PF11_0049 "NOT family protein, ... 968 6.4e-187 7
POMBASE|SPAC20G8.06 - symbol:not1 "CCR4-Not complex subun... 654 5.2e-148 4
SGD|S000000689 - symbol:CDC39 "Component of the CCR4-NOT ... 635 6.5e-146 6
CGD|CAL0001252 - symbol:CDC39 species:5476 "Candida albic... 496 4.8e-144 5
UNIPROTKB|Q59R01 - symbol:CDC39 "Potential mRNA deadenyla... 496 4.8e-144 5
RGD|1308009 - symbol:Cnot1 "CCR4-NOT transcription comple... 1275 8.6e-129 1
DICTYBASE|DDB_G0287399 - symbol:DDB_G0287399 species:4468... 125 0.00082 1
>ZFIN|ZDB-GENE-040915-1 [details] [associations]
symbol:cnot1 "CCR4-NOT transcription complex, subunit
1" species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] ZFIN:ZDB-GENE-040915-1
InterPro:IPR007196 InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 EMBL:CU468035 IPI:IPI00829204
Ensembl:ENSDART00000017536 ArrayExpress:F1QAM0 Bgee:F1QAM0
Uniprot:F1QAM0
Length = 2375
Score = 1400 (497.9 bits), Expect = 3.6e-307, Sum P(5) = 3.6e-307
Identities = 327/773 (42%), Positives = 451/773 (58%)
Query: 1516 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNNLHFS 1574
Q L A+ A + Q + S + +++ SRD AAL + QK +GL + S
Sbjct: 1621 QHLHAIPPALAMNPQTQAIRSLLEAVVMARNSRDGIAALGLLQKAVEGLLDATSG----- 1675
Query: 1575 AHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLI 1634
A +L + R+ LV+K L Y + N+ IT LI E + +YNV +L+
Sbjct: 1676 ADPELLLSYRECHLLVLKALQDGRAYGPQW--CNKQITRCLI--ECRDEYKYNVEAVELL 1731
Query: 1635 DGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALA--KLAAKPGSPESLQQLIE-I 1691
++ + L Q++ + + ++ LV L + + + L IE +
Sbjct: 1732 IRNHLVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKLLLVDERSVSHITEADLFHTIETL 1791
Query: 1692 VRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTA-NREDYN-IPESVD-PDPVGFPEQ 1748
+R D R + + H N ++ I ++ + DP G E+
Sbjct: 1792 MRTSAHSRANAPEGLPQLMDVVRSNYEAMIDRHHGGPNFMMHSGISQASEYDDPPGLREK 1851
Query: 1749 VSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTE--VSVAH 1803
L EW Y + A + +V Q+HQ G+LK DD+ RFFR TE V +++
Sbjct: 1852 AEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISY 1911
Query: 1804 CLSSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIFLLSKILTVT 1862
+E +P T + +D + +L+ ++K + +KI LL+K+L +
Sbjct: 1912 RAQAEQQHPTTSPAIIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIV 1969
Query: 1863 VKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLK 1922
V +++D + ++ F PY R+FI LL++++ + V + NFQ L+AF N FH+L+P K
Sbjct: 1970 VGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTK 2029
Query: 1923 VPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRNAELGVPVRF 1981
P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN EL P++
Sbjct: 2030 APGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPMQI 2089
Query: 1982 LYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNL 2041
LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMRLPDP TPNL
Sbjct: 2090 LYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNL 2149
Query: 2042 KIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAA 2101
K+D+L EI PRI + + + Q + D+D YLKT P +FLSEL+ L + +
Sbjct: 2150 KVDMLSEINIAPRILTNFTGVMPS-QFKKDLDSYLKTRSP-VTFLSELRSNLQV----SN 2203
Query: 2102 SAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQD 2161
G RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +DIFQ L D
Sbjct: 2204 EPGNRYNIQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHMDIFQNLAVD 2256
Query: 2162 LDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRP 2221
LDTEGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL ERLIVNRP
Sbjct: 2257 LDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANAEAIQEQITRVLLERLIVNRP 2316
Query: 2222 HPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSM 2274
HPWGLLITFIELIKNP + FW+ F+ CAPEIEKLF+SVA+ C G K M
Sbjct: 2317 HPWGLLITFIELIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVM 2369
Score = 586 (211.3 bits), Expect = 3.6e-307, Sum P(5) = 3.6e-307
Identities = 130/362 (35%), Positives = 207/362 (57%)
Query: 745 VSAASSSDMKPLLSSIGQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTST 804
++ A + P GQ S++ T++ ++ P + P + V +
Sbjct: 1009 LAQAQAQSQPPKAPQPGQASTLVTTATTTTTAAKTTTITRPTAVG-------PKKDVPPS 1061
Query: 805 KFGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQY 864
+ NI+TL+ A ++ E +E P + VQ+KI+FI NN+S N+ K +E E +KE++
Sbjct: 1062 I--NTTNIDTLLVATDQTERIVEPPEN-VQEKIAFIFNNLSQSNMSQKVEELKETVKEEF 1118
Query: 865 YPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSS 924
PW +QY+VMKR SIEPNFH LY FLD + + + ++ TY N KVLL S+ ++
Sbjct: 1119 MPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANF 1178
Query: 925 EERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPC 982
+RSLLKNLG WLG +T+ +N+ + +++ KSL++EAY KG ++ V+PF +K+LE
Sbjct: 1179 SDRSLLKNLGHWLGMITLAKNKPILYTDLELKSLLLEAYVKGQQELLYVVPFVAKVLESS 1238
Query: 983 QSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLL--K 1040
S+ ++P NPWTM I+ +LAE++ +LK+NLKF+IEVL KNL +D+ D+ P +LL K
Sbjct: 1239 LRSVIFRPQNPWTMGIMNVLAELHQEHDLKLNLKFEIEVLCKNLSMDITDLKPGNLLRDK 1298
Query: 1041 DRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHV-DLPLDVASPPNSGGPTHLLS 1099
D+ + +E K+ + +L+P V A P P + +G PT S
Sbjct: 1299 DKLKTLEEQLSAPKKETKPPE-ELLPIVTTADSVPFTAAPSTPATTTACTATGPPTPQFS 1357
Query: 1100 QY 1101
+
Sbjct: 1358 YH 1359
Score = 471 (170.9 bits), Expect = 3.6e-307, Sum P(5) = 3.6e-307
Identities = 130/448 (29%), Positives = 228/448 (50%)
Query: 24 IMFLQR-SSDLSKH-VDSLMQILSLLQSKDHTQFVLNPVL-PDELHDATSLRDLDLFHEC 80
++F Q+ SS + + +D+ ++ L ++ VL P+L PD+ RD+ L
Sbjct: 188 LLFGQKGSSGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPDK-------RDI-LMDRI 239
Query: 81 RDDDFDDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLS---RILGA 137
D D L + E S+ D M E+GYG A +C+ I+ + + E+T S R+LG
Sbjct: 240 LPDSGD--LNKTMMESSLADFMQEVGYGFCASLEECRNIILQYG-VREVTASQVARVLGM 296
Query: 138 IARTHAGLEDNQNTFSTFTLALGCSTM-SDLPPLS----SWNVDVLVKAIKQLAPNTNWI 192
+ARTH+GL D + T T +G + SD S +WNV+VL+ +K++ PN N+
Sbjct: 297 MARTHSGLSDGIS-LQTITNPVGGGGIWSDGKDKSDSSQAWNVEVLIDVVKEVNPNLNFK 355
Query: 193 RVVENLDYEGFYIPTEEAFSFFM-SVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVA 251
V LD+ GF I + + + + E FP+ + WK+ EGQLSF+++++
Sbjct: 356 EVTYELDHPGFLIRDSKGLQIVVYGIQRGLGMEVFPVDLIYRP-WKHAEGQLSFIQHSLL 414
Query: 252 SPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSML 311
SP EVF FA +D + + W SE+GH + +
Sbjct: 415 SP-EVFCFADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGHYEQVKQLF 473
Query: 312 EYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPN 367
+P+K CP+ML+L + I+T+++ +++E+ + P+ + + ++ +ILH WH +P+
Sbjct: 474 SFPIKHCPDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPS 533
Query: 368 I---VLRGFVD----AQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKE 420
I ++ + + + RIL++ Q+LK LS +L P F I LA +AS++E
Sbjct: 534 IRQLIMHSMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRRE 593
Query: 421 LVDLEKWLSINLSTYKDVFFEECLKFVK 448
+ L+KWL+ + + + F + C+ F+K
Sbjct: 594 YLKLDKWLTDKIREHGEPFIQACVTFLK 621
Score = 402 (146.6 bits), Expect = 3.6e-307, Sum P(5) = 3.6e-307
Identities = 74/157 (47%), Positives = 114/157 (72%)
Query: 525 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 580
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 829 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLF 888
Query: 581 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 640
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 889 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 948
Query: 641 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 677
AL++F +RL ++PQYC H+ I+H L +IE
Sbjct: 949 ALDRFKNRLKDYPQYCQHLASIAHFLQFPHHLQEYIE 985
Score = 329 (120.9 bits), Expect = 3.6e-307, Sum P(5) = 3.6e-307
Identities = 76/238 (31%), Positives = 129/238 (54%)
Query: 1128 PSAQGLFQASQSQSP-FSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRA 1185
P+ A+ +P FS ++ + + H+ IN + L H ++ V A++RA
Sbjct: 1340 PATTTACTATGPPTPQFSYHDINVYALAGLAPHININVNIPLLQAHPQLKQCVRPAIERA 1399
Query: 1186 IKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEP 1245
++E+V +V RS+ IA T +++V KD+A++S+E+ + AAH M+ +L +A +TC+EP
Sbjct: 1400 VQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESHMRVAAHHMMRNLTAGMAMITCREP 1459
Query: 1246 LRGSISSQLRNSLQGLTIAS-----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTID 1300
L SI++ L+NS A E++E+A + DN +L C I++ A +KA +D
Sbjct: 1460 LLMSIATNLKNSFAAALRAPTPQQREMMEEAAARIAQDNCELACCFIQKTAVEKAGPEMD 1519
Query: 1301 GEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1358
+A + LR KH G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1520 KRLATEFELR-KHARQEGRRYCDPMVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1576
Score = 49 (22.3 bits), Expect = 3.0e-183, Sum P(3) = 3.0e-183
Identities = 27/94 (28%), Positives = 38/94 (40%)
Query: 1371 AMSAGSLTSSGDAAQASAYGLAGGQGNQGYSSSAGSTGFDAVSRP--SDVASGTTESTSA 1428
AM + SL S + S G QG+ + + + F + P S G +S
Sbjct: 716 AMGSLSLGVSSTSHTPSMQGFPSLQGSAFSNPQSPAKAFSNLPNPNPSTAFPGINPLSSQ 775
Query: 1429 --GFLSTSLVHIGAADGGILHNSESESVNAAFTP 1460
G LSTSL IG+ G +S+ S TP
Sbjct: 776 LQGPLSTSLSGIGSGLGMPTVSSDVFSARKMSTP 809
Score = 43 (20.2 bits), Expect = 7.7e-71, Sum P(5) = 7.7e-71
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 2198 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRY 2239
E +E ++E+ + + L++ R P+ L F++ +KNP +
Sbjct: 1108 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEF 1153
Score = 42 (19.8 bits), Expect = 1.5e-167, Sum P(3) = 1.5e-167
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 836 KISFIINNISALNVEAKAKEFTEIL 860
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 5.1e-219, Sum P(5) = 5.1e-219
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 1418 VASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEP 1477
V + TT +T+A T+ + A G S+N T T L A D TE + EP
Sbjct: 1031 VTTATTTTTAA---KTTTITRPTAVGP--KKDVPPSINT--TNIDTLLVATDQTERIVEP 1083
Query: 1478 GASSQ 1482
+ Q
Sbjct: 1084 PENVQ 1088
Score = 39 (18.8 bits), Expect = 4.9e-224, Sum P(4) = 4.9e-224
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 656 CNHILQISHLRSTHAELVAFIERALARISSGHLESDGAS 694
C +I+ +R A VA + +AR SG SDG S
Sbjct: 273 CRNIILQYGVREVTASQVARVLGMMARTHSGL--SDGIS 309
Score = 38 (18.4 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
Identities = 19/70 (27%), Positives = 25/70 (35%)
Query: 2223 PWGLLITFIELIKNPRY---NFWNQSFIR--CAPEIEKLFESVARSC----GGLKPVDDS 2273
P+ +I L Y + W IR P I+ + R C GGL P D
Sbjct: 578 PFAFVIDLAALASRREYLKLDKWLTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPEKDQ 637
Query: 2274 MVSGWVPDNT 2283
S +P T
Sbjct: 638 PKSAQLPPET 647
Score = 37 (18.1 bits), Expect = 5.1e-219, Sum P(5) = 5.1e-219
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 1318 GSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSS 1366
G DP + QGS+ P G L+++Q + + P Q+S
Sbjct: 987 GQQSRDPPVKMQGSITTP-------GSLALAQAQAQSQPPKAPQPGQAS 1028
Score = 37 (18.1 bits), Expect = 5.2e-167, Sum P(3) = 5.2e-167
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 237 KNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDA 271
K E QLS + P E+ +A +P+ A
Sbjct: 1302 KTLEEQLSAPKKETKPPEELLPIVTTADSVPFTAA 1336
>UNIPROTKB|F1MHU9 [details] [associations]
symbol:CNOT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005778 "peroxisomal membrane" evidence=IEA]
GO:GO:0005778 GO:GO:0000932 OMA:YLKARAP InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 EMBL:DAAA02046541 IPI:IPI00708264
Ensembl:ENSBTAT00000027695 Uniprot:F1MHU9
Length = 2371
Score = 1358 (483.1 bits), Expect = 1.8e-303, Sum P(6) = 1.8e-303
Identities = 279/542 (51%), Positives = 360/542 (66%)
Query: 1741 DPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLT 1797
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR T
Sbjct: 1839 DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCT 1898
Query: 1798 E--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIF 1853
E V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1899 EMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKIN 1956
Query: 1854 LLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFAN 1913
LL+K+L + V +L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF N
Sbjct: 1957 LLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCN 2016
Query: 1914 AFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRN 1972
FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN
Sbjct: 2017 TFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRN 2076
Query: 1973 AELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMR 2032
EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMR
Sbjct: 2077 VELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMR 2136
Query: 2033 LPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQK 2092
LPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 2137 LPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSN 2194
Query: 2093 LLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAAL 2152
L + + G RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +
Sbjct: 2195 LQV----SNEPGNRYNLQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHM 2243
Query: 2153 DIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVL 2212
DIFQ L DLDTEGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL
Sbjct: 2244 DIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVL 2303
Query: 2213 FERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDD 2272
ERLIVNRPHPWGLLITFIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K
Sbjct: 2304 LERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQ 2363
Query: 2273 SM 2274
M
Sbjct: 2364 VM 2365
Score = 1017 (363.1 bits), Expect = 2.7e-265, Sum P(5) = 2.7e-265
Identities = 251/664 (37%), Positives = 378/664 (56%)
Query: 1516 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1570
Q L A+ A + Q + S + ++L SRD AAL + QK +GL + S
Sbjct: 1616 QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL 1675
Query: 1571 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1624
L + HL +L A++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1676 LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1735
Query: 1625 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDE---SRVVISELHNLVDALAKLAA--KP 1679
+Y++H+A+ ++ G N A FA+ L++ L+ DE + V ++L + ++ L ++ A +
Sbjct: 1736 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG 1795
Query: 1680 GSPESLQQLIEIVRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYNIPESVD 1739
+PE L QL+E+VR+ D+A + +S + E Y+
Sbjct: 1796 NAPEGLPQLMEVVRSNYEAMI----------DRAHGGPNFMMHSGISQASE-YD------ 1838
Query: 1740 PDPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRL 1796
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR
Sbjct: 1839 -DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLC 1897
Query: 1797 TE--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKI 1852
TE V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1898 TEMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKI 1955
Query: 1853 FLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFA 1912
LL+K+L + V +L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF
Sbjct: 1956 NLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFC 2015
Query: 1913 NAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLR 1971
N FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLR
Sbjct: 2016 NTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLR 2075
Query: 1972 NAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNM 2031
N EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNM
Sbjct: 2076 NVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNM 2135
Query: 2032 RLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQ 2091
RLPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 2136 RLPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRS 2193
Query: 2092 KLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSH-AQSTGNNSSLTAFLVSA 2150
L + + G RYN+ LIN+LVLYVG QAI + + S + ST +S+ +
Sbjct: 2194 NLQV----SNEPGNRYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNL 2249
Query: 2151 ALDI 2154
A+D+
Sbjct: 2250 AVDL 2253
Score = 620 (223.3 bits), Expect = 1.8e-303, Sum P(6) = 1.8e-303
Identities = 134/346 (38%), Positives = 204/346 (58%)
Query: 761 GQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAE 820
GQ S++ T++ K V+ P +S PS T NI+TL+ A +
Sbjct: 1029 GQVSTMVTTSTTTTVAKTVT-VTRPTGVSFKKDVP-PSINTT--------NIDTLLVATD 1078
Query: 821 RRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIE 880
+ E +E P + +Q+KI+FI NN+S N+ K +E E +KE++ PW +QY+VMKR SIE
Sbjct: 1079 QTERIVEPPEN-IQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIE 1137
Query: 881 PNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKL 940
PNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLLKNLG WLG +
Sbjct: 1138 PNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMI 1197
Query: 941 TIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAYQPPNPWTMAI 998
T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE S+ ++PPNPWTMAI
Sbjct: 1198 TLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAI 1257
Query: 999 LGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR--EIEGNPDFSNKD 1056
+ +LAE++ +LK+NLKF+IEVL KNL +D+ ++ P +LLKD+ R ++ KD
Sbjct: 1258 MNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKD 1317
Query: 1057 VGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1102
V QP+ +P + S PP H ++ Y+
Sbjct: 1318 V--KQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYS 1361
Score = 447 (162.4 bits), Expect = 1.8e-303, Sum P(6) = 1.8e-303
Identities = 119/430 (27%), Positives = 209/430 (48%)
Query: 89 LAEMEKEMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLE 146
+A+ E S+ D M E+GYG A +C+ I+ F +T ++R+LG +ARTH+GL
Sbjct: 246 VAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMARTHSGLT 305
Query: 147 DNQNTFSTFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEG 202
D S G SD +WNV+VL+ +K+L P+ N+ V LD+ G
Sbjct: 306 DGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPG 365
Query: 203 FYIPTEEAF-SFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAH 261
F I + + + + E FP+ + WK+ EGQLSF+++++ +P E+F FA
Sbjct: 366 FQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRP-WKHAEGQLSFIQHSLINP-EIFCFAD 423
Query: 262 SARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEM 321
D + + W +E+G + + +P+K CP+M
Sbjct: 424 YPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDM 483
Query: 322 LLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPNI---VLRGFV 374
L+L + INT+++ +++E+ + P+ + + ++ +ILH WH +P+I ++
Sbjct: 484 LVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMA 543
Query: 375 D----AQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSI 430
+ + + RIL++ Q+LK LS +L P F I LA +AS++E + L+KWL+
Sbjct: 544 EWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTD 603
Query: 431 NLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGL 490
+ + + F + C+ F+K + + A L E + +L L+A G
Sbjct: 604 KIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSA--QLPPETLATMLACLQACAGS 661
Query: 491 ITSTKLSEEI 500
+ S +LSE I
Sbjct: 662 V-SQELSETI 670
Score = 406 (148.0 bits), Expect = 1.8e-303, Sum P(6) = 1.8e-303
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 525 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 580
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 832 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLF 891
Query: 581 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 640
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 892 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 951
Query: 641 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 677
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 952 ALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 988
Score = 335 (123.0 bits), Expect = 1.8e-303, Sum P(6) = 1.8e-303
Identities = 75/225 (33%), Positives = 126/225 (56%)
Query: 1140 QSPFSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSV 1198
Q +S ++ + + H+ +N + H ++ V A++RA++E+V +V RS+
Sbjct: 1349 QPQYSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSI 1408
Query: 1199 SIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL 1258
IA T +++V KD+A++S+E+R+ AAH M+ +L +A +TC+EPL SIS+ L+NS
Sbjct: 1409 KIAMTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSF 1468
Query: 1259 -QGLTIAS----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKH 1313
L AS E+++QA + DN +L C I++ A +KA +D +A + LR KH
Sbjct: 1469 ASALRTASPQQREMMDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KH 1527
Query: 1314 REGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1358
G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1528 ARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1572
Score = 49 (22.3 bits), Expect = 5.7e-71, Sum P(4) = 5.7e-71
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2198 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2240
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 1111 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 1157
Score = 43 (20.2 bits), Expect = 1.3e-131, Sum P(4) = 1.3e-131
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 1553 LAVAQKVFKGLYENASNNLHFSAH-LAILAAIRDVCKLVVKELTSWVIYSDE--ERKFNR 1609
++ +F G + N++ LH++ H +IR +L++ + W + ++ + K +R
Sbjct: 503 ISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIR---QLIMHAMAEWYMRGEQYDQAKLSR 559
Query: 1610 --DITMGL-IRSELLN 1622
D+ L S LLN
Sbjct: 560 ILDVAQDLKALSMLLN 575
Score = 42 (19.8 bits), Expect = 4.9e-212, Sum P(5) = 4.9e-212
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 1418 VASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEP 1477
V++ T ST+ T V + G S+N T T L A D TE + EP
Sbjct: 1031 VSTMVTTSTTTTVAKT--VTVTRPTGVSFKKDVPPSINT--TNIDTLLVATDQTERIVEP 1086
Query: 1478 GASSQ 1482
+ Q
Sbjct: 1087 PENIQ 1091
Score = 42 (19.8 bits), Expect = 2.6e-162, Sum P(4) = 2.6e-162
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 836 KISFIINNISALNVEAKAKEFTEIL 860
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 5.6e-174, Sum P(4) = 5.6e-174
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1460 PAATELYAADSTEPVK-EP--GASSQSLPSTAAPERIGSSILEPSL 1502
P+A+ L D+ PV+ +P G +S S+ +AAP P+L
Sbjct: 698 PSASSL---DAISPVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNL 740
Score = 40 (19.1 bits), Expect = 8.0e-212, Sum P(5) = 8.0e-212
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1234 AGSLAHVTCKEPLRGSISSQLRNS 1257
A + A V K PL G +S+ + S
Sbjct: 1015 AQAQAQVPAKAPLAGQVSTMVTTS 1038
Score = 39 (18.8 bits), Expect = 1.0e-211, Sum P(5) = 1.0e-211
Identities = 19/87 (21%), Positives = 30/87 (34%)
Query: 778 LHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI 837
+ N + AM++ F SAL A+ ++RE +A A QD
Sbjct: 1440 MRNLTAGMAMITCREPLLMSISTNLKNSFASALR----TASPQQREMMDQAAAQLAQDNC 1495
Query: 838 SFIINNISALNVEAKAKEFTEILKEQY 864
I VE E + L ++
Sbjct: 1496 ELACCFIQKTAVEKAGPEMDKRLATEF 1522
Score = 37 (18.1 bits), Expect = 1.8e-303, Sum P(6) = 1.8e-303
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 1662 ISELHNLVDALAKLAAKPGSPESLQQLIEIV 1692
I+EL + A+ A ++L+ L+E+V
Sbjct: 1611 ITELEQHLHAIPPTLAMNPQAQALRSLLEVV 1641
>UNIPROTKB|A5YKK6 [details] [associations]
symbol:CNOT1 "CCR4-NOT transcription complex subunit 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS;IDA] [GO:0004535 "poly(A)-specific
ribonuclease activity" evidence=IDA] [GO:2000036 "regulation of
stem cell maintenance" evidence=IMP] [GO:0010606 "positive
regulation of cytoplasmic mRNA processing body assembly"
evidence=IDA] [GO:1900153 "positive regulation of
nuclear-transcribed mRNA catabolic process, deadenylation-dependent
decay" evidence=IMP] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0042974 "retinoic acid receptor binding" evidence=IDA]
[GO:0048387 "negative regulation of retinoic acid receptor
signaling pathway" evidence=IDA] [GO:0030331 "estrogen receptor
binding" evidence=IDA] [GO:0033147 "negative regulation of
intracellular estrogen receptor signaling pathway" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005778 "peroxisomal
membrane" evidence=IDA] [GO:0030014 "CCR4-NOT complex"
evidence=IDA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 GO:GO:0005829 GO:GO:0006355 GO:GO:0006351
GO:GO:0005778 GO:GO:0000932 GO:GO:0000289 EMBL:AL117492
EMBL:BX537840 EMBL:CR749237 EMBL:EF553522 EMBL:AC009118
EMBL:AC010287 EMBL:BC000779 EMBL:BC024317 EMBL:BC040523
EMBL:AB023224 EMBL:AF110778 IPI:IPI00166010 IPI:IPI00410157
IPI:IPI00642900 IPI:IPI00880052 PIR:T17270 RefSeq:NP_001252541.1
RefSeq:NP_057368.3 RefSeq:NP_996882.1 UniGene:Hs.460923
UniGene:Hs.731691 PDB:4GMJ PDB:4GML PDBsum:4GMJ PDBsum:4GML
ProteinModelPortal:A5YKK6 DIP:DIP-44954N IntAct:A5YKK6
MINT:MINT-2835018 STRING:A5YKK6 PhosphoSite:A5YKK6 PaxDb:A5YKK6
PeptideAtlas:A5YKK6 PRIDE:A5YKK6 Ensembl:ENST00000317147
Ensembl:ENST00000441024 Ensembl:ENST00000567188
Ensembl:ENST00000569240 GeneID:23019 KEGG:hsa:23019 UCSC:uc002enu.4
UCSC:uc002env.3 UCSC:uc002enx.3 CTD:23019 GeneCards:GC16M058553
H-InvDB:HIX0013093 HGNC:HGNC:7877 MIM:604917 neXtProt:NX_A5YKK6
PharmGKB:PA26672 eggNOG:COG5103 HOVERGEN:HBG060834
InParanoid:A5YKK6 KO:K12604 OMA:YLKARAP OrthoDB:EOG495ZQV
PhylomeDB:A5YKK6 ChiTaRS:CNOT1 GenomeRNAi:23019 NextBio:43960
ArrayExpress:A5YKK6 Bgee:A5YKK6 Genevestigator:A5YKK6
InterPro:IPR007196 InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
Uniprot:A5YKK6
Length = 2376
Score = 1358 (483.1 bits), Expect = 1.9e-303, Sum P(6) = 1.9e-303
Identities = 279/542 (51%), Positives = 360/542 (66%)
Query: 1741 DPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLT 1797
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR T
Sbjct: 1844 DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCT 1903
Query: 1798 E--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIF 1853
E V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1904 EMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKIN 1961
Query: 1854 LLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFAN 1913
LL+K+L + V +L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF N
Sbjct: 1962 LLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCN 2021
Query: 1914 AFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRN 1972
FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN
Sbjct: 2022 TFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRN 2081
Query: 1973 AELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMR 2032
EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMR
Sbjct: 2082 VELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMR 2141
Query: 2033 LPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQK 2092
LPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 2142 LPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSN 2199
Query: 2093 LLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAAL 2152
L + + G RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +
Sbjct: 2200 LQV----SNEPGNRYNLQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHM 2248
Query: 2153 DIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVL 2212
DIFQ L DLDTEGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL
Sbjct: 2249 DIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVL 2308
Query: 2213 FERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDD 2272
ERLIVNRPHPWGLLITFIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K
Sbjct: 2309 LERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQ 2368
Query: 2273 SM 2274
M
Sbjct: 2369 VM 2370
Score = 1017 (363.1 bits), Expect = 2.7e-265, Sum P(5) = 2.7e-265
Identities = 251/664 (37%), Positives = 378/664 (56%)
Query: 1516 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1570
Q L A+ A + Q + S + ++L SRD AAL + QK +GL + S
Sbjct: 1621 QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL 1680
Query: 1571 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1624
L + HL +L A++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1681 LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1740
Query: 1625 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDE---SRVVISELHNLVDALAKLAA--KP 1679
+Y++H+A+ ++ G N A FA+ L++ L+ DE + V ++L + ++ L ++ A +
Sbjct: 1741 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG 1800
Query: 1680 GSPESLQQLIEIVRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYNIPESVD 1739
+PE L QL+E+VR+ D+A + +S + E Y+
Sbjct: 1801 NAPEGLPQLMEVVRSNYEAMI----------DRAHGGPNFMMHSGISQASE-YD------ 1843
Query: 1740 PDPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRL 1796
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR
Sbjct: 1844 -DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLC 1902
Query: 1797 TE--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKI 1852
TE V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1903 TEMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKI 1960
Query: 1853 FLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFA 1912
LL+K+L + V +L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF
Sbjct: 1961 NLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFC 2020
Query: 1913 NAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLR 1971
N FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLR
Sbjct: 2021 NTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLR 2080
Query: 1972 NAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNM 2031
N EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNM
Sbjct: 2081 NVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNM 2140
Query: 2032 RLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQ 2091
RLPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 2141 RLPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRS 2198
Query: 2092 KLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSH-AQSTGNNSSLTAFLVSA 2150
L + + G RYN+ LIN+LVLYVG QAI + + S + ST +S+ +
Sbjct: 2199 NLQV----SNEPGNRYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNL 2254
Query: 2151 ALDI 2154
A+D+
Sbjct: 2255 AVDL 2258
Score = 621 (223.7 bits), Expect = 1.9e-303, Sum P(6) = 1.9e-303
Identities = 134/346 (38%), Positives = 205/346 (59%)
Query: 761 GQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAE 820
GQ S++ T++ K V+ P +S PS T NI+TL+ A +
Sbjct: 1034 GQVSTMVTTSTTTTVAKTVT-VTRPTGVSFKKDVP-PSINTT--------NIDTLLVATD 1083
Query: 821 RRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIE 880
+ E +E P + +Q+KI+FI NN+S N+ K +E E +KE++ PW +QY+VMKR SIE
Sbjct: 1084 QTERIVEPPEN-IQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIE 1142
Query: 881 PNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKL 940
PNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLLKNLG WLG +
Sbjct: 1143 PNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMI 1202
Query: 941 TIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAYQPPNPWTMAI 998
T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE S+ ++PPNPWTMAI
Sbjct: 1203 TLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAI 1262
Query: 999 LGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR--EIEGNPDFSNKD 1056
+ +LAE++ +LK+NLKF+IEVL KNL +D+ ++ P +LLKD+ R ++ KD
Sbjct: 1263 MNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKD 1322
Query: 1057 VGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1102
V QP+ +P + S + PP H ++ Y+
Sbjct: 1323 V--KQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYS 1366
Score = 446 (162.1 bits), Expect = 1.9e-303, Sum P(6) = 1.9e-303
Identities = 119/430 (27%), Positives = 209/430 (48%)
Query: 89 LAEMEKEMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLE 146
+A+ E S+ D M E+GYG A +C+ I+ F +T ++R+LG +ARTH+GL
Sbjct: 246 VAKTMMESSLADFMQEVGYGFCASIEECRNIIVQFGVREVTAAQVARVLGMMARTHSGLT 305
Query: 147 DNQNTFSTFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEG 202
D S G SD +WNV+VL+ +K+L P+ N+ V LD+ G
Sbjct: 306 DGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPG 365
Query: 203 FYIPTEEAF-SFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAH 261
F I + + + + E FP+ + WK+ EGQLSF+++++ +P E+F FA
Sbjct: 366 FQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRP-WKHAEGQLSFIQHSLINP-EIFCFAD 423
Query: 262 SARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEM 321
D + + W +E+G + + +P+K CP+M
Sbjct: 424 YPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDM 483
Query: 322 LLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPNI---VLRGFV 374
L+L + INT+++ +++E+ + P+ + + ++ +ILH WH +P+I ++
Sbjct: 484 LVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMA 543
Query: 375 D----AQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSI 430
+ + + RIL++ Q+LK LS +L P F I LA +AS++E + L+KWL+
Sbjct: 544 EWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTD 603
Query: 431 NLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGL 490
+ + + F + C+ F+K + + A L E + +L L+A G
Sbjct: 604 KIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSA--QLPPETLATMLACLQACAGS 661
Query: 491 ITSTKLSEEI 500
+ S +LSE I
Sbjct: 662 V-SQELSETI 670
Score = 406 (148.0 bits), Expect = 1.9e-303, Sum P(6) = 1.9e-303
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 525 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 580
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 837 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLF 896
Query: 581 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 640
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 897 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 956
Query: 641 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 677
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 957 ALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 993
Score = 335 (123.0 bits), Expect = 1.9e-303, Sum P(6) = 1.9e-303
Identities = 75/225 (33%), Positives = 126/225 (56%)
Query: 1140 QSPFSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSV 1198
Q +S ++ + + H+ +N + H ++ V A++RA++E+V +V RS+
Sbjct: 1354 QPQYSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSI 1413
Query: 1199 SIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL 1258
IA T +++V KD+A++S+E+R+ AAH M+ +L +A +TC+EPL SIS+ L+NS
Sbjct: 1414 KIAMTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSF 1473
Query: 1259 -QGLTIAS----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKH 1313
L AS E+++QA + DN +L C I++ A +KA +D +A + LR KH
Sbjct: 1474 ASALRTASPQQREMMDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KH 1532
Query: 1314 REGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1358
G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1533 ARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1577
Score = 49 (22.3 bits), Expect = 7.4e-71, Sum P(4) = 7.4e-71
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2198 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2240
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 1116 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 1162
Score = 43 (20.2 bits), Expect = 1.3e-131, Sum P(4) = 1.3e-131
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 1553 LAVAQKVFKGLYENASNNLHFSAH-LAILAAIRDVCKLVVKELTSWVIYSDE--ERKFNR 1609
++ +F G + N++ LH++ H +IR +L++ + W + ++ + K +R
Sbjct: 503 ISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIR---QLIMHAMAEWYMRGEQYDQAKLSR 559
Query: 1610 --DITMGL-IRSELLN 1622
D+ L S LLN
Sbjct: 560 ILDVAQDLKALSMLLN 575
Score = 42 (19.8 bits), Expect = 6.6e-212, Sum P(5) = 6.6e-212
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 1418 VASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEP 1477
V++ T ST+ T V + G S+N T T L A D TE + EP
Sbjct: 1036 VSTMVTTSTTTTVAKT--VTVTRPTGVSFKKDVPPSINT--TNIDTLLVATDQTERIVEP 1091
Query: 1478 GASSQ 1482
+ Q
Sbjct: 1092 PENIQ 1096
Score = 42 (19.8 bits), Expect = 2.7e-162, Sum P(4) = 2.7e-162
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 836 KISFIINNISALNVEAKAKEFTEIL 860
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 7.3e-174, Sum P(4) = 7.3e-174
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1460 PAATELYAADSTEPVK-EP--GASSQSLPSTAAPERIGSSILEPSL 1502
P+A+ L D+ PV+ +P G +S S+ +AAP P+L
Sbjct: 698 PSASSL---DAISPVQIDPLAGMTSLSIGGSAAPHTQSMQGFPPNL 740
Score = 40 (19.1 bits), Expect = 1.1e-211, Sum P(5) = 1.1e-211
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1234 AGSLAHVTCKEPLRGSISSQLRNS 1257
A + A V K PL G +S+ + S
Sbjct: 1020 AQAQAQVPAKAPLAGQVSTMVTTS 1043
Score = 39 (18.8 bits), Expect = 1.4e-211, Sum P(5) = 1.4e-211
Identities = 19/87 (21%), Positives = 30/87 (34%)
Query: 778 LHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI 837
+ N + AM++ F SAL A+ ++RE +A A QD
Sbjct: 1445 MRNLTAGMAMITCREPLLMSISTNLKNSFASALR----TASPQQREMMDQAAAQLAQDNC 1500
Query: 838 SFIINNISALNVEAKAKEFTEILKEQY 864
I VE E + L ++
Sbjct: 1501 ELACCFIQKTAVEKAGPEMDKRLATEF 1527
Score = 37 (18.1 bits), Expect = 1.9e-303, Sum P(6) = 1.9e-303
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 1662 ISELHNLVDALAKLAAKPGSPESLQQLIEIV 1692
I+EL + A+ A ++L+ L+E+V
Sbjct: 1616 ITELEQHLHAIPPTLAMNPQAQALRSLLEVV 1646
>UNIPROTKB|F1RFU3 [details] [associations]
symbol:CNOT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005778 "peroxisomal membrane" evidence=IEA]
GO:GO:0005778 GO:GO:0000932 CTD:23019 KO:K12604 OMA:YLKARAP
InterPro:IPR007196 InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 EMBL:FP236140 RefSeq:XP_003127000.1
Ensembl:ENSSSCT00000003099 GeneID:100511993 KEGG:ssc:100511993
Uniprot:F1RFU3
Length = 2375
Score = 1358 (483.1 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 279/542 (51%), Positives = 360/542 (66%)
Query: 1741 DPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLT 1797
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR T
Sbjct: 1843 DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCT 1902
Query: 1798 E--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIF 1853
E V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1903 EMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKIN 1960
Query: 1854 LLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFAN 1913
LL+K+L + V +L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF N
Sbjct: 1961 LLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCN 2020
Query: 1914 AFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRN 1972
FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN
Sbjct: 2021 TFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRN 2080
Query: 1973 AELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMR 2032
EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMR
Sbjct: 2081 VELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMR 2140
Query: 2033 LPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQK 2092
LPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 2141 LPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSN 2198
Query: 2093 LLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAAL 2152
L + + G RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +
Sbjct: 2199 LQV----SNEPGNRYNLQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHM 2247
Query: 2153 DIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVL 2212
DIFQ L DLDTEGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL
Sbjct: 2248 DIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVL 2307
Query: 2213 FERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDD 2272
ERLIVNRPHPWGLLITFIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K
Sbjct: 2308 LERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQ 2367
Query: 2273 SM 2274
M
Sbjct: 2368 VM 2369
Score = 1014 (362.0 bits), Expect = 7.5e-265, Sum P(5) = 7.5e-265
Identities = 251/664 (37%), Positives = 377/664 (56%)
Query: 1516 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1570
Q L A+ A + Q + S + ++L SRD AAL + QK +GL + S
Sbjct: 1620 QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL 1679
Query: 1571 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1624
L + HL +L A++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1680 LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1739
Query: 1625 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVI---SELHNLVDALAKLAA--KP 1679
+Y++H+A+ ++ G N A FA+ L++ L+ DE V ++L + ++ L ++ A +
Sbjct: 1740 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHFTEADLFHTIETLMRINAHSRG 1799
Query: 1680 GSPESLQQLIEIVRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYNIPESVD 1739
+PE L QL+E+VR+ D+A + +S + E Y+
Sbjct: 1800 NAPEGLPQLMEVVRSNYEAMI----------DRAHGGPNFMMHSGISQASE-YD------ 1842
Query: 1740 PDPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRL 1796
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR
Sbjct: 1843 -DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLC 1901
Query: 1797 TE--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKI 1852
TE V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1902 TEMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKI 1959
Query: 1853 FLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFA 1912
LL+K+L + V +L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF
Sbjct: 1960 NLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFC 2019
Query: 1913 NAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLR 1971
N FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLR
Sbjct: 2020 NTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLR 2079
Query: 1972 NAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNM 2031
N EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNM
Sbjct: 2080 NVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNM 2139
Query: 2032 RLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQ 2091
RLPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 2140 RLPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRS 2197
Query: 2092 KLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSH-AQSTGNNSSLTAFLVSA 2150
L + + G RYN+ LIN+LVLYVG QAI + + S + ST +S+ +
Sbjct: 2198 NLQV----SNEPGNRYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNL 2253
Query: 2151 ALDI 2154
A+D+
Sbjct: 2254 AVDL 2257
Score = 620 (223.3 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 134/346 (38%), Positives = 204/346 (58%)
Query: 761 GQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAE 820
GQ S++ T++ K V+ P +S PS T NI+TL+ A +
Sbjct: 1034 GQVSTMVTTSTTTTVAKTVT-VTRPTGVSFKKDVP-PSINTT--------NIDTLLVATD 1083
Query: 821 RRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIE 880
+ E +E P + +Q+KI+FI NN+S N+ K +E E +KE++ PW +QY+VMKR SIE
Sbjct: 1084 QTERIVEPPEN-IQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIE 1142
Query: 881 PNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKL 940
PNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLLKNLG WLG +
Sbjct: 1143 PNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMI 1202
Query: 941 TIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAYQPPNPWTMAI 998
T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE S+ ++PPNPWTMAI
Sbjct: 1203 TLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAI 1262
Query: 999 LGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR--EIEGNPDFSNKD 1056
+ +LAE++ +LK+NLKF+IEVL KNL +D+ ++ P +LLKD+ R ++ KD
Sbjct: 1263 MNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKD 1322
Query: 1057 VGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1102
V QP+ +P + S PP H ++ Y+
Sbjct: 1323 V--KQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYS 1366
Score = 447 (162.4 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 119/430 (27%), Positives = 209/430 (48%)
Query: 89 LAEMEKEMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLE 146
+A+ E S+ D M E+GYG A +C+ I+ F +T ++R+LG +ARTH+GL
Sbjct: 246 VAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMARTHSGLT 305
Query: 147 DNQNTFSTFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEG 202
D S G SD +WNV+VL+ +K+L P+ N+ V LD+ G
Sbjct: 306 DGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPG 365
Query: 203 FYIPTEEAF-SFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAH 261
F I + + + + E FP+ + WK+ EGQLSF+++++ +P E+F FA
Sbjct: 366 FQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRP-WKHAEGQLSFIQHSLINP-EIFCFAD 423
Query: 262 SARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEM 321
D + + W +E+G + + +P+K CP+M
Sbjct: 424 YPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDM 483
Query: 322 LLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPNI---VLRGFV 374
L+L + INT+++ +++E+ + P+ + + ++ +ILH WH +P+I ++
Sbjct: 484 LVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMA 543
Query: 375 D----AQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSI 430
+ + + RIL++ Q+LK LS +L P F I LA +AS++E + L+KWL+
Sbjct: 544 EWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTD 603
Query: 431 NLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGL 490
+ + + F + C+ F+K + + A L E + +L L+A G
Sbjct: 604 KIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSA--QLPPETLATMLACLQACAGS 661
Query: 491 ITSTKLSEEI 500
+ S +LSE I
Sbjct: 662 V-SQELSETI 670
Score = 406 (148.0 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 525 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 580
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 837 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLF 896
Query: 581 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 640
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 897 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 956
Query: 641 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 677
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 957 ALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 993
Score = 334 (122.6 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 73/209 (34%), Positives = 120/209 (57%)
Query: 1155 IGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYA 1214
+ H+ +N + H ++ V A++RA++E+V +V RS+ IA T +++V KD+A
Sbjct: 1370 LAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFA 1429
Query: 1215 MESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL-QGLTIAS----ELLE 1269
++S+E+R+ AAH M+ +L +A +TC+EPL SIS+ L+NS L AS E+++
Sbjct: 1430 LDSEESRMRMAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMD 1489
Query: 1270 QAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSSFFDPNIYAQ 1329
QA + DN +L C I++ A +KA +D +A + LR KH G + DP +
Sbjct: 1490 QAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KHARQEGRRYCDPVVLTY 1548
Query: 1330 GSMGVPEALRPKPGHLSVSQQRVYEDFVR 1358
+ +PE +R K G + Q VYE+F R
Sbjct: 1549 QAERMPEQIRLKVGGVDPKQLAVYEEFAR 1577
Score = 49 (22.3 bits), Expect = 5.8e-71, Sum P(4) = 5.8e-71
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2198 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2240
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 1116 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 1162
Score = 43 (20.2 bits), Expect = 1.3e-131, Sum P(4) = 1.3e-131
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 1553 LAVAQKVFKGLYENASNNLHFSAH-LAILAAIRDVCKLVVKELTSWVIYSDE--ERKFNR 1609
++ +F G + N++ LH++ H +IR +L++ + W + ++ + K +R
Sbjct: 503 ISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIR---QLIMHAMAEWYMRGEQYDQAKLSR 559
Query: 1610 --DITMGL-IRSELLN 1622
D+ L S LLN
Sbjct: 560 ILDVAQDLKALSMLLN 575
Score = 42 (19.8 bits), Expect = 1.1e-211, Sum P(6) = 1.1e-211
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 1418 VASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEP 1477
V++ T ST+ T V + G S+N T T L A D TE + EP
Sbjct: 1036 VSTMVTTSTTTTVAKT--VTVTRPTGVSFKKDVPPSINT--TNIDTLLVATDQTERIVEP 1091
Query: 1478 GASSQ 1482
+ Q
Sbjct: 1092 PENIQ 1096
Score = 42 (19.8 bits), Expect = 3.5e-162, Sum P(4) = 3.5e-162
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 836 KISFIINNISALNVEAKAKEFTEIL 860
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 1.9e-173, Sum P(5) = 1.9e-173
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1460 PAATELYAADSTEPVK-EP--GASSQSLPSTAAPERIGSSILEPSL 1502
P+A+ L D+ PV+ +P G +S S+ +AAP P+L
Sbjct: 698 PSASSL---DAISPVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNL 740
Score = 40 (19.1 bits), Expect = 2.0e-272, Sum P(6) = 2.0e-272
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 1573 FSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSEL-LNLAEYNVHMA 1631
F AH + +R + V+EL V+ D K ++R + L+ E + MA
Sbjct: 1383 FQAHPQLKQCVRQAIERAVQELVHPVV--DRSIKIAMTTCEQIVRKDFALDSEESRMRMA 1440
Score = 40 (19.1 bits), Expect = 1.8e-211, Sum P(6) = 1.8e-211
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1234 AGSLAHVTCKEPLRGSISSQLRNS 1257
A + A V K PL G +S+ + S
Sbjct: 1020 AQAQAQVPAKAPLAGQVSTMVTTS 1043
Score = 39 (18.8 bits), Expect = 1.1e-211, Sum P(5) = 1.1e-211
Identities = 19/87 (21%), Positives = 30/87 (34%)
Query: 778 LHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI 837
+ N + AM++ F SAL A+ ++RE +A A QD
Sbjct: 1445 MRNLTAGMAMITCREPLLMSISTNLKNSFASALR----TASPQQREMMDQAAAQLAQDNC 1500
Query: 838 SFIINNISALNVEAKAKEFTEILKEQY 864
I VE E + L ++
Sbjct: 1501 ELACCFIQKTAVEKAGPEMDKRLATEF 1527
Score = 37 (18.1 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 1662 ISELHNLVDALAKLAAKPGSPESLQQLIEIV 1692
I+EL + A+ A ++L+ L+E+V
Sbjct: 1615 ITELEQHLHAIPPTLAMNPQAQALRSLLEVV 1645
>MGI|MGI:2442402 [details] [associations]
symbol:Cnot1 "CCR4-NOT transcription complex, subunit 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010606 "positive regulation of cytoplasmic mRNA
processing body assembly" evidence=ISO] [GO:0030014 "CCR4-NOT
complex" evidence=ISO] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033147 "negative regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0042974
"retinoic acid receptor binding" evidence=ISO] [GO:0048387
"negative regulation of retinoic acid receptor signaling pathway"
evidence=ISO] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISO]
[GO:1900153 "positive regulation of nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=ISO]
[GO:2000036 "regulation of stem cell maintenance" evidence=ISO]
MGI:MGI:2442402 GO:GO:0006355 GO:GO:0006351 GO:GO:0005778
GO:GO:0000932 CTD:23019 eggNOG:COG5103 HOVERGEN:HBG060834 KO:K12604
OMA:YLKARAP OrthoDB:EOG495ZQV ChiTaRS:CNOT1 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 EMBL:AC113951
EMBL:AC127300 EMBL:AK031357 EMBL:AK034776 EMBL:AK048177
EMBL:AK143651 EMBL:BC018281 EMBL:BC158073 EMBL:AK129258
IPI:IPI00672703 IPI:IPI00673465 IPI:IPI00880243 IPI:IPI00881912
RefSeq:NP_835179.1 UniGene:Mm.259220 ProteinModelPortal:Q6ZQ08
DIP:DIP-46845N IntAct:Q6ZQ08 STRING:Q6ZQ08 PhosphoSite:Q6ZQ08
PaxDb:Q6ZQ08 PRIDE:Q6ZQ08 Ensembl:ENSMUST00000098473 GeneID:234594
KEGG:mmu:234594 UCSC:uc009myy.1 UCSC:uc009myz.2 UCSC:uc009mzb.2
GeneTree:ENSGT00390000014869 NextBio:382234 Bgee:Q6ZQ08
CleanEx:MM_CNOT1 Genevestigator:Q6ZQ08 Uniprot:Q6ZQ08
Length = 2375
Score = 1358 (483.1 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 279/542 (51%), Positives = 360/542 (66%)
Query: 1741 DPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLT 1797
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR T
Sbjct: 1843 DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCT 1902
Query: 1798 E--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIF 1853
E V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1903 EMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKIN 1960
Query: 1854 LLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFAN 1913
LL+K+L + V +L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF N
Sbjct: 1961 LLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCN 2020
Query: 1914 AFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRN 1972
FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN
Sbjct: 2021 TFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRN 2080
Query: 1973 AELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMR 2032
EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMR
Sbjct: 2081 VELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMR 2140
Query: 2033 LPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQK 2092
LPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 2141 LPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSN 2198
Query: 2093 LLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAAL 2152
L + + G RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +
Sbjct: 2199 LQV----SNEPGNRYNLQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHM 2247
Query: 2153 DIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVL 2212
DIFQ L DLDTEGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL
Sbjct: 2248 DIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVL 2307
Query: 2213 FERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDD 2272
ERLIVNRPHPWGLLITFIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K
Sbjct: 2308 LERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQ 2367
Query: 2273 SM 2274
M
Sbjct: 2368 VM 2369
Score = 1017 (363.1 bits), Expect = 3.5e-265, Sum P(5) = 3.5e-265
Identities = 253/664 (38%), Positives = 378/664 (56%)
Query: 1516 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1570
Q L A+ A + Q + S + ++L SRD AAL + QK +GL + S
Sbjct: 1620 QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL 1679
Query: 1571 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1624
L + HL +L A++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1680 LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1739
Query: 1625 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVV-ISE--LHNLVDALAKLAA--KP 1679
+Y++H+A+ ++ G N A FA+ L++ L+ DE V I+E L + ++ L ++ A +
Sbjct: 1740 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG 1799
Query: 1680 GSPESLQQLIEIVRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYNIPESVD 1739
+PE L QL+E+VR+ D+A + +S + E Y+
Sbjct: 1800 NAPEGLPQLMEVVRSNYEAMI----------DRAHGGPNFMMHSGISQASE-YD------ 1842
Query: 1740 PDPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRL 1796
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR
Sbjct: 1843 -DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLC 1901
Query: 1797 TE--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKI 1852
TE V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1902 TEMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKI 1959
Query: 1853 FLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFA 1912
LL+K+L + V +L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF
Sbjct: 1960 NLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFC 2019
Query: 1913 NAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLR 1971
N FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLR
Sbjct: 2020 NTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLR 2079
Query: 1972 NAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNM 2031
N EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNM
Sbjct: 2080 NVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNM 2139
Query: 2032 RLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQ 2091
RLPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 2140 RLPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRS 2197
Query: 2092 KLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSH-AQSTGNNSSLTAFLVSA 2150
L + + G RYN+ LIN+LVLYVG QAI + + S + ST +S+ +
Sbjct: 2198 NLQV----SNEPGNRYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNL 2253
Query: 2151 ALDI 2154
A+D+
Sbjct: 2254 AVDL 2257
Score = 622 (224.0 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 124/296 (41%), Positives = 187/296 (63%)
Query: 811 NIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQ 870
NI+TL+ A ++ E +E P + +Q+KI+FI NN+S N+ K +E E +KE++ PW +Q
Sbjct: 1073 NIDTLLVATDQTERIVEPPEN-IQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQ 1131
Query: 871 YMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLL 930
Y+VMKR SIEPNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLL
Sbjct: 1132 YLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLL 1191
Query: 931 KNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAY 988
KNLG WLG +T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE SL +
Sbjct: 1192 KNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSLVF 1251
Query: 989 QPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR--EI 1046
+PPNPWTMAI+ +LAE++ +LK+NLKF+IEVL KNL +D+ ++ P +LLKD+ R +
Sbjct: 1252 RPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNL 1311
Query: 1047 EGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1102
+ KDV QP+ +P + S PP H ++ Y+
Sbjct: 1312 DEQLSAPKKDV--KQPEELPAITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYS 1365
Score = 444 (161.4 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 119/430 (27%), Positives = 209/430 (48%)
Query: 89 LAEMEKEMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLE 146
+A+ E S+ D M E+GYG A +C+ I+ F +T ++R+LG +ARTH+GL
Sbjct: 246 VAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMARTHSGLT 305
Query: 147 DNQNTFSTFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEG 202
D S G S+ +WNV+VL+ +K+L P+ N+ V LD+ G
Sbjct: 306 DGIPLQSISAPGSGIWSDGKDKSEGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPG 365
Query: 203 FYIPTEEAF-SFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAH 261
F I + + + + E FP+ + WK+ EGQLSF+++++ +P EVF FA
Sbjct: 366 FQIRDSKGLHNVVYGIQRGLGMEVFPVDFIYRP-WKHAEGQLSFIQHSLINP-EVFCFAD 423
Query: 262 SARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEM 321
D + + W +E+G + + +P+K CP+M
Sbjct: 424 YPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDM 483
Query: 322 LLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPNI---VLRGFV 374
L+L + INT+++ +++E+ + P+ + + ++ +ILH WH +P+I ++
Sbjct: 484 LVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMA 543
Query: 375 D----AQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSI 430
+ + + RIL++ Q+LK LS +L P F I LA +AS++E + L+KWL+
Sbjct: 544 EWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTD 603
Query: 431 NLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGL 490
+ + + F + C+ F+K + + A L E + +L L+A G
Sbjct: 604 KIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSA--QLPAETLATMLACLQACAGS 661
Query: 491 ITSTKLSEEI 500
+ S +LSE I
Sbjct: 662 V-SQELSETI 670
Score = 406 (148.0 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 525 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 580
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 836 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLF 895
Query: 581 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 640
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 896 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 955
Query: 641 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 677
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 956 ALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 992
Score = 335 (123.0 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 75/225 (33%), Positives = 126/225 (56%)
Query: 1140 QSPFSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSV 1198
Q +S ++ + + H+ +N + H ++ V A++RA++E+V +V RS+
Sbjct: 1353 QPQYSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSI 1412
Query: 1199 SIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL 1258
IA T +++V KD+A++S+E+R+ AAH M+ +L +A +TC+EPL SIS+ L+NS
Sbjct: 1413 KIAMTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSF 1472
Query: 1259 -QGLTIAS----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKH 1313
L AS E+++QA + DN +L C I++ A +KA +D +A + LR KH
Sbjct: 1473 ASALRTASPQQREMMDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KH 1531
Query: 1314 REGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1358
G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1532 ARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1576
Score = 49 (22.3 bits), Expect = 1.0e-68, Sum P(5) = 1.0e-68
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2198 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2240
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 1115 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 1161
Score = 43 (20.2 bits), Expect = 1.3e-131, Sum P(4) = 1.3e-131
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 1553 LAVAQKVFKGLYENASNNLHFSAH-LAILAAIRDVCKLVVKELTSWVIYSDE--ERKFNR 1609
++ +F G + N++ LH++ H +IR +L++ + W + ++ + K +R
Sbjct: 503 ISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIR---QLIMHAMAEWYMRGEQYDQAKLSR 559
Query: 1610 --DITMGL-IRSELLN 1622
D+ L S LLN
Sbjct: 560 ILDVAQDLKALSMLLN 575
Score = 42 (19.8 bits), Expect = 2.7e-162, Sum P(4) = 2.7e-162
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 836 KISFIINNISALNVEAKAKEFTEIL 860
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 1.2e-173, Sum P(4) = 1.2e-173
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1460 PAATELYAADSTEPVK-EP--GASSQSLPSTAAPERIGSSILEPSL 1502
P+A+ L D+ PV+ +P G +S S+ +AAP P+L
Sbjct: 698 PSASSL---DAISPVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNL 740
Score = 39 (18.8 bits), Expect = 2.2e-211, Sum P(5) = 2.2e-211
Identities = 19/87 (21%), Positives = 30/87 (34%)
Query: 778 LHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI 837
+ N + AM++ F SAL A+ ++RE +A A QD
Sbjct: 1444 MRNLTAGMAMITCREPLLMSISTNLKNSFASALR----TASPQQREMMDQAAAQLAQDNC 1499
Query: 838 SFIINNISALNVEAKAKEFTEILKEQY 864
I VE E + L ++
Sbjct: 1500 ELACCFIQKTAVEKAGPEMDKRLATEF 1526
Score = 39 (18.8 bits), Expect = 9.7e-211, Sum P(6) = 9.7e-211
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 1453 SVNAAFTPAATELYAADSTEPVKEPGASSQ 1482
S+N T T L A D TE + EP + Q
Sbjct: 1068 SINT--TNIDTLLVATDQTERIVEPPENIQ 1095
Score = 37 (18.1 bits), Expect = 2.3e-303, Sum P(6) = 2.3e-303
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 1662 ISELHNLVDALAKLAAKPGSPESLQQLIEIV 1692
I+EL + A+ A ++L+ L+E+V
Sbjct: 1615 ITELEQHLHAIPPTLAMNPQAQALRSLLEVV 1645
Score = 37 (18.1 bits), Expect = 9.7e-211, Sum P(6) = 9.7e-211
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1234 AGSLAHVTCKEPLRGSISSQLRNS 1257
A + A V K PL G +++ + S
Sbjct: 1019 AQAQAQVPAKAPLAGQVNTMVTTS 1042
>UNIPROTKB|G3V7M0 [details] [associations]
symbol:Cnot1 "RCG39079" species:10116 "Rattus norvegicus"
[GO:0005778 "peroxisomal membrane" evidence=IEA] RGD:1308009
CTD:23019 KO:K12604 InterPro:IPR007196 InterPro:IPR024557
Pfam:PF12842 Pfam:PF04054 GeneTree:ENSGT00390000014869
EMBL:CH474006 RefSeq:NP_001128312.1 UniGene:Rn.56498 PRIDE:G3V7M0
Ensembl:ENSRNOT00000016563 GeneID:291841 KEGG:rno:291841
NextBio:633244 Uniprot:G3V7M0
Length = 2376
Score = 1358 (483.1 bits), Expect = 2.4e-303, Sum P(6) = 2.4e-303
Identities = 279/542 (51%), Positives = 360/542 (66%)
Query: 1741 DPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLT 1797
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR T
Sbjct: 1844 DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCT 1903
Query: 1798 E--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIF 1853
E V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1904 EMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKIN 1961
Query: 1854 LLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFAN 1913
LL+K+L + V +L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF N
Sbjct: 1962 LLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCN 2021
Query: 1914 AFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRN 1972
FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN
Sbjct: 2022 TFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRN 2081
Query: 1973 AELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMR 2032
EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMR
Sbjct: 2082 VELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMR 2141
Query: 2033 LPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQK 2092
LPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 2142 LPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSN 2199
Query: 2093 LLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAAL 2152
L + + G RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +
Sbjct: 2200 LQV----SNEPGNRYNLQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHM 2248
Query: 2153 DIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVL 2212
DIFQ L DLDTEGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL
Sbjct: 2249 DIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVL 2308
Query: 2213 FERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDD 2272
ERLIVNRPHPWGLLITFIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K
Sbjct: 2309 LERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQ 2368
Query: 2273 SM 2274
M
Sbjct: 2369 VM 2370
Score = 1013 (361.7 bits), Expect = 9.8e-265, Sum P(5) = 9.8e-265
Identities = 252/664 (37%), Positives = 377/664 (56%)
Query: 1516 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1570
Q L A+ A + Q + S + ++L SRD AAL + QK +GL + S
Sbjct: 1621 QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL 1680
Query: 1571 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1624
L + HL +L ++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1681 LLRYRECHLLVLKGLQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1740
Query: 1625 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVV-ISE--LHNLVDALAKLAA--KP 1679
+Y++H+A+ ++ G N A FA+ L++ L+ DE V I+E L + ++ L ++ A +
Sbjct: 1741 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG 1800
Query: 1680 GSPESLQQLIEIVRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYNIPESVD 1739
+PE L QL+E+VR+ D+A + +S + E Y+
Sbjct: 1801 NAPEGLPQLMEVVRSNYEAMI----------DRAHGGPNFMMHSGISQASE-YD------ 1843
Query: 1740 PDPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRL 1796
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR
Sbjct: 1844 -DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLC 1902
Query: 1797 TE--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKI 1852
TE V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1903 TEMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKI 1960
Query: 1853 FLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFA 1912
LL+K+L + V +L+D + +++ F PY R+FI LL++++ + V + NFQ L+AF
Sbjct: 1961 NLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFC 2020
Query: 1913 NAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLR 1971
N FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLR
Sbjct: 2021 NTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLR 2080
Query: 1972 NAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNM 2031
N EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNM
Sbjct: 2081 NVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNM 2140
Query: 2032 RLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQ 2091
RLPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 2141 RLPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRS 2198
Query: 2092 KLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSH-AQSTGNNSSLTAFLVSA 2150
L + + G RYN+ LIN+LVLYVG QAI + + S + ST +S+ +
Sbjct: 2199 NLQV----SNEPGNRYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNL 2254
Query: 2151 ALDI 2154
A+D+
Sbjct: 2255 AVDL 2258
Score = 622 (224.0 bits), Expect = 2.4e-303, Sum P(6) = 2.4e-303
Identities = 124/296 (41%), Positives = 187/296 (63%)
Query: 811 NIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQ 870
NI+TL+ A ++ E +E P + +Q+KI+FI NN+S N+ K +E E +KE++ PW +Q
Sbjct: 1074 NIDTLLVATDQTERIVEPPEN-IQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQ 1132
Query: 871 YMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLL 930
Y+VMKR SIEPNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLL
Sbjct: 1133 YLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLL 1192
Query: 931 KNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAY 988
KNLG WLG +T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE SL +
Sbjct: 1193 KNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSLVF 1252
Query: 989 QPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR--EI 1046
+PPNPWTMAI+ +LAE++ +LK+NLKF+IEVL KNL +D+ ++ P +LLKD+ R +
Sbjct: 1253 RPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNL 1312
Query: 1047 EGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1102
+ KDV QP+ +P + S PP H ++ Y+
Sbjct: 1313 DEQLSAPKKDV--KQPEELPAITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYS 1366
Score = 444 (161.4 bits), Expect = 2.4e-303, Sum P(6) = 2.4e-303
Identities = 119/430 (27%), Positives = 209/430 (48%)
Query: 89 LAEMEKEMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLE 146
+A+ E S+ D M E+GYG A +C+ I+ F +T ++R+LG +ARTH+GL
Sbjct: 246 VAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMARTHSGLT 305
Query: 147 DNQNTFSTFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEG 202
D S G S+ +WNV+VL+ +K+L P+ N+ V LD+ G
Sbjct: 306 DGIPLQSISAPGSGIWSDGKDKSEGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPG 365
Query: 203 FYIPTEEAF-SFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAH 261
F I + + + + E FP+ + WK+ EGQLSF+++++ +P EVF FA
Sbjct: 366 FQIRDSKGLHNVVYGIQRGLGMEVFPVDFIYRP-WKHAEGQLSFIQHSLINP-EVFCFAD 423
Query: 262 SARQLPYVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEM 321
D + + W +E+G + + +P+K CP+M
Sbjct: 424 YPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDM 483
Query: 322 LLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPNI---VLRGFV 374
L+L + INT+++ +++E+ + P+ + + ++ +ILH WH +P+I ++
Sbjct: 484 LVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMA 543
Query: 375 D----AQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSI 430
+ + + RIL++ Q+LK LS +L P F I LA +AS++E + L+KWL+
Sbjct: 544 EWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTD 603
Query: 431 NLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGL 490
+ + + F + C+ F+K + + A L E + +L L+A G
Sbjct: 604 KIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSA--QLPAETLATMLACLQACAGS 661
Query: 491 ITSTKLSEEI 500
+ S +LSE I
Sbjct: 662 V-SQELSETI 670
Score = 406 (148.0 bits), Expect = 2.4e-303, Sum P(6) = 2.4e-303
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 525 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 580
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 837 NQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLF 896
Query: 581 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 640
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 897 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIA 956
Query: 641 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 677
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 957 ALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 993
Score = 335 (123.0 bits), Expect = 2.4e-303, Sum P(6) = 2.4e-303
Identities = 75/225 (33%), Positives = 126/225 (56%)
Query: 1140 QSPFSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSV 1198
Q +S ++ + + H+ +N + H ++ V A++RA++E+V +V RS+
Sbjct: 1354 QPQYSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSI 1413
Query: 1199 SIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL 1258
IA T +++V KD+A++S+E+R+ AAH M+ +L +A +TC+EPL SIS+ L+NS
Sbjct: 1414 KIAMTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSF 1473
Query: 1259 -QGLTIAS----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKH 1313
L AS E+++QA + DN +L C I++ A +KA +D +A + LR KH
Sbjct: 1474 ASALRTASPQQREMMDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KH 1532
Query: 1314 REGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1358
G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1533 ARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1577
Score = 49 (22.3 bits), Expect = 1.0e-68, Sum P(5) = 1.0e-68
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2198 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2240
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 1116 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 1162
Score = 43 (20.2 bits), Expect = 1.3e-131, Sum P(4) = 1.3e-131
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 1553 LAVAQKVFKGLYENASNNLHFSAH-LAILAAIRDVCKLVVKELTSWVIYSDE--ERKFNR 1609
++ +F G + N++ LH++ H +IR +L++ + W + ++ + K +R
Sbjct: 503 ISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIR---QLIMHAMAEWYMRGEQYDQAKLSR 559
Query: 1610 --DITMGL-IRSELLN 1622
D+ L S LLN
Sbjct: 560 ILDVAQDLKALSMLLN 575
Score = 42 (19.8 bits), Expect = 2.7e-162, Sum P(4) = 2.7e-162
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 836 KISFIINNISALNVEAKAKEFTEIL 860
+IS++++N++ N A +E I+
Sbjct: 12 QISYLVDNLTKKNYRASQQEIQHIV 36
Score = 41 (19.5 bits), Expect = 1.2e-173, Sum P(4) = 1.2e-173
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1460 PAATELYAADSTEPVK-EP--GASSQSLPSTAAPERIGSSILEPSL 1502
P+A+ L D+ PV+ +P G +S S+ +AAP P+L
Sbjct: 698 PSASSL---DAISPVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNL 740
Score = 39 (18.8 bits), Expect = 2.2e-211, Sum P(5) = 2.2e-211
Identities = 19/87 (21%), Positives = 30/87 (34%)
Query: 778 LHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI 837
+ N + AM++ F SAL A+ ++RE +A A QD
Sbjct: 1445 MRNLTAGMAMITCREPLLMSISTNLKNSFASALR----TASPQQREMMDQAAAQLAQDNC 1500
Query: 838 SFIINNISALNVEAKAKEFTEILKEQY 864
I VE E + L ++
Sbjct: 1501 ELACCFIQKTAVEKAGPEMDKRLATEF 1527
Score = 39 (18.8 bits), Expect = 9.8e-211, Sum P(6) = 9.8e-211
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 1453 SVNAAFTPAATELYAADSTEPVKEPGASSQ 1482
S+N T T L A D TE + EP + Q
Sbjct: 1069 SINT--TNIDTLLVATDQTERIVEPPENIQ 1096
Score = 37 (18.1 bits), Expect = 2.4e-303, Sum P(6) = 2.4e-303
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 1662 ISELHNLVDALAKLAAKPGSPESLQQLIEIV 1692
I+EL + A+ A ++L+ L+E+V
Sbjct: 1616 ITELEQHLHAIPPTLAMNPQAQALRSLLEVV 1646
Score = 37 (18.1 bits), Expect = 9.8e-211, Sum P(6) = 9.8e-211
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1234 AGSLAHVTCKEPLRGSISSQLRNS 1257
A + A V K PL G +++ + S
Sbjct: 1020 AQAQAQVPAKAPLAGQVNTMVTTS 1043
>DICTYBASE|DDB_G0276029 [details] [associations]
symbol:DDB_G0276029 "putative CCR4-NOT complex
subunit 1" species:44689 "Dictyostelium discoideum" [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0030015 "CCR4-NOT core
complex" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] dictyBase:DDB_G0276029 GO:GO:0005634
GO:GO:0005737 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0000122 GO:GO:0051726 GO:GO:0000288 GO:GO:0030015
GO:GO:0000175 eggNOG:COG5103 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 OMA:ANIAGTR
RefSeq:XP_643319.1 ProteinModelPortal:Q75JL4
EnsemblProtists:DDB0220028 GeneID:8620365 KEGG:ddi:DDB_G0276029
InParanoid:Q75JL4 ProtClustDB:CLSZ2445457 Uniprot:Q75JL4
Length = 2526
Score = 1230 (438.0 bits), Expect = 4.0e-300, Sum P(5) = 4.0e-300
Identities = 244/417 (58%), Positives = 305/417 (73%)
Query: 1850 SKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILS 1909
+K+ +L+K+L+V +K + KD E + FN RPY R+F N L+D++S DP+ + + IL
Sbjct: 2115 TKLNMLTKVLSVLIKILTKDYENNPSRFNQRPYLRIFENLLVDLTSPDPILEHVSNHILF 2174
Query: 1910 AFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPF 1969
F NA LQP K P F FAWL+L+SH+SFMPKLLI QK W LLV +FLEPF
Sbjct: 2175 CFVNALATLQPQKYPGFCFAWLDLLSHKSFMPKLLIRQ-QKQW--FHALLVQHFKFLEPF 2231
Query: 1970 LRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPR 2029
LR +L PVR LYKGTL+VLL+LLHDFPEFLC+YHF+ CDVIP +CIQ+RN+ILSAFPR
Sbjct: 2232 LRGGDLSEPVRVLYKGTLKVLLLLLHDFPEFLCEYHFSLCDVIPNTCIQLRNLILSAFPR 2291
Query: 2030 NMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSEL 2089
NMRLPDP TPNLKID+LP+I PP+I S A+L K ++ ++D+Y K P SFL +L
Sbjct: 2292 NMRLPDPFTPNLKIDMLPDINQPPKISSNFTASL--KGLKIEIDNYFKNRGP-YSFLLDL 2348
Query: 2090 KQK--LLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFL 2147
K K LL E +AGT+YNVPLINSLVLY+G AI Q+Q ++ A +
Sbjct: 2349 KNKHLLLTDKEEILAAGTKYNVPLINSLVLYIGTLAIPQIQRKSGVAPTPSQ-------- 2400
Query: 2148 VSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQ 2207
SA +DIF L DLD+EGRY+F NA ANQLRYPNNHTHY S V+L+L++E+ Q+II+EQ
Sbjct: 2401 -SAPMDIFHRLALDLDSEGRYIFFNAIANQLRYPNNHTHYLSCVILFLFSESGQDIIKEQ 2459
Query: 2208 ITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSC 2264
ITRVL ERLI N+PHPWGLLITFIELIKN RYNFW+ F + APEI +LF+SVA+SC
Sbjct: 2460 ITRVLLERLISNKPHPWGLLITFIELIKNLRYNFWSHGFTKVAPEIAQLFDSVAKSC 2516
Score = 661 (237.7 bits), Expect = 4.0e-300, Sum P(5) = 4.0e-300
Identities = 167/657 (25%), Positives = 326/657 (49%)
Query: 43 ILSLLQSKDHTQFVLNPVLPDELHDATSLRD-LDLFHECRDDDFDDILAEMEKEMSMGDV 101
I+S + ++ +++ + A++L+D L F + + D I+ M E++
Sbjct: 394 IISKVSQQNVPYQIISSIGYSSCSSASTLKDILFQFQKLTESDIAQIIVSMA-ELTSNTN 452
Query: 102 MNELGYGCSADASQCKEILSL-FTPLTEITLSRI--LGAIARTHAGLEDNQNTFSTFTLA 158
N + D ++ +I L F L + S + + + E + T +T +
Sbjct: 453 NNNNNNNENNDENEKTKIPYLTFNDLNDKETSNTSPTSSSPKQQSENESSSTTTTTNSNN 512
Query: 159 LGCSTMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVY 218
+ +++P WN+ + V IK+L P +W V+ +D + +F ++VY
Sbjct: 513 NNNNNTTNIP--DEWNISIFVDVIKELYPTIDWDIVIREMDCPIVNNMDQRGLAFILAVY 570
Query: 219 KYACQ------EPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAV 272
K A Q +PFP+ + VW N+ Q+ FL+ A+ S + F F +S ++ +D
Sbjct: 571 KKATQVDQQQSKPFPIDFILDRVWVNSLSQIQFLKIAIQS--DFFPFQNSTKKR--IDQS 626
Query: 273 PGLKLQSGQANHAWXXXXXXXXXXXXSEMG--HASFARSMLEYPLKQCPEMLLLGMAHIN 330
K H W S++ H S + + + P+K C ++L+LG++ I
Sbjct: 627 SLSKSTPPTIAH-WNSISLIETLLQLSDIDSEHYSKVKPLFDSPIKNCLDLLILGVSSIT 685
Query: 331 TAYNLIQYEVSFAVFPMIIKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEI 390
N +Q E+ +F ++ ++ +W +P V++ D +P R+L++
Sbjct: 686 LKKNKLQNELLTTLFQTLLSQHNYQSIVSQLWKDHPLTVIQIMADITQKDPKELSRLLDV 745
Query: 391 CQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYK-DVFFEECLKFVKE 449
QELKIL +L PF + LA +ASQ+E + LE+W+ + F +EC+ F+ +
Sbjct: 746 AQELKILRQMLYCKTYPFIVNLAALASQREYLFLERWVQERMKEDDHQSFIKECISFLND 805
Query: 450 --VQFGRS-QDFSAQPFHHSGALLNLYMEKIPV-ILKLLKAHIGLITSTKLSEEIEKFQA 505
++ G+S ++ S S P +++ + + T ++ ++
Sbjct: 806 RVLKKGKSGEENSNTAASASPTTATTGSGSFPPQSIQISNNVLSTLCKTLMAAP-DQIPT 864
Query: 506 VVLDSTPRLQNG-EAADSSTSEG-YADDIEAEANSYFHQMFSGQLTIEAMVQMLARFKES 563
+ + + + A+S T+E + ++E E NSYF +++SG+++++ ++ +L +K S
Sbjct: 865 DLFNDLKNISAALQTAESETTERRFPAEVEDETNSYFIKLYSGEISVDQIISVLKEYKVS 924
Query: 564 SVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVL 623
+++ IF+C++ NLF+EY+F YP+++L+I +LFGS+IK+QL++ L +AL+ VL
Sbjct: 925 KNQKDQDIFKCLLFNLFDEYKFLSDYPDKELKITGLLFGSLIKNQLISSQPLRVALKYVL 984
Query: 624 DALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERAL 680
+A+R P +S MF+FG +L F +RL+EWPQY I I H R + +++ + + +
Sbjct: 985 EAMRFPLNSNMFIFGVNSLISFANRLVEWPQYWAQICSIDHFRDNYGDIILSVNKII 1041
Score = 587 (211.7 bits), Expect = 4.0e-300, Sum P(5) = 4.0e-300
Identities = 121/270 (44%), Positives = 173/270 (64%)
Query: 806 FGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYY 865
F + + I TL+ A++ P + +DKI FIINNIS N++ KAK+ +ILK +YY
Sbjct: 1224 FSTTIPIGTLLNASKEMIQPDDI----TKDKIYFIINNISQNNLDVKAKDLKDILKPEYY 1279
Query: 866 PWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSE 925
+FAQY+V+KR SIE NFH LYL F+D++ ++ ++ +++N LL SE I+
Sbjct: 1280 DYFAQYLVVKRVSIEANFHALYLAFIDRLCIPTISERVLFHSHQNVHTLLKSEKIRVDHS 1339
Query: 926 ERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSS 985
ERSLLKNLG WLG T+ RN+ L + I PK L+I A E GL+IA++PF +K+LE CQ S
Sbjct: 1340 ERSLLKNLGGWLGLNTLARNKPLLQKVISPKDLLIYAAENGLLIAIVPFVAKLLEHCQQS 1399
Query: 986 LAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRK-- 1043
++PPNPW MAIL L+ EIY + K N+KF++E+L NL VD+ + PT++L DR+
Sbjct: 1400 KVFRPPNPWVMAILRLMVEIYQLKESKNNIKFEVELLCNNLSVDINTVKPTTILADRRQQ 1459
Query: 1044 REIEGNPDFSNKDVGASQPQLVPEVKPAIV 1073
REIE + KD S L+ + +V
Sbjct: 1460 REIEQQEENMRKDNKQSSIDLLSNLPRYLV 1489
Score = 463 (168.0 bits), Expect = 4.0e-300, Sum P(5) = 4.0e-300
Identities = 105/234 (44%), Positives = 146/234 (62%)
Query: 1152 IPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLK 1211
+ N+ +++ + A F++ VP+A D+A++EI++ +V+RSV+IA T+KELV K
Sbjct: 1481 LSNLPRYLVYTPSIGAYAQSPIFKKAVPLAFDKAVREIIAPVVERSVAIAVITSKELVSK 1540
Query: 1212 DYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQ---GLTIASELL 1268
D+A E+DE ++ A+HLMV +LAGSLA VTCK+PLR SI + LR LQ GL L
Sbjct: 1541 DFATEADEQKMKRASHLMVQNLAGSLALVTCKDPLRVSIIAYLRTLLQNNNGLPPCEIPL 1600
Query: 1269 EQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSS-FFDPNIY 1327
E A+ LV N+NLD C+++E AAT+KAI +ID +A + R KHRE +GS FFD
Sbjct: 1601 EHAISLVCNENLDFACSIVETAATEKAIISIDEVLASSYNDRLKHREQMGSQPFFDMGYL 1660
Query: 1328 AQGSMG-VPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLTSS 1380
+PE+LRPKPG + Q RVYEDF LP S A +LT+S
Sbjct: 1661 TTTIYNTLPESLRPKPGGIQPDQFRVYEDFTNLPHHINISNVGGAGETDNLTAS 1714
Score = 283 (104.7 bits), Expect = 3.5e-197, Sum P(5) = 3.5e-197
Identities = 70/211 (33%), Positives = 113/211 (53%)
Query: 1736 ESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRR 1795
E + DP G E V L +W + ++ +Y+ Q+ Q +K + +FFR
Sbjct: 2017 EDMIVDPPGLREAVIALLQDWL-LFSSTNTDQKILIQYLGQVLQISFMKNELYFIKFFRL 2075
Query: 1796 LTEVSVA-HCLSSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGSSKIFL 1854
E ++ + + E+ +P +L ID + + ++ ++K +K+ +
Sbjct: 2076 GLEYALERYAANVEIQSP------------QYLEIDSWCRFVVMMVK----HADPTKLNM 2119
Query: 1855 LSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANA 1914
L+K+L+V +K + KD E + FN RPY R+F N L+D++S DP+ + + IL F NA
Sbjct: 2120 LTKVLSVLIKILTKDYENNPSRFNQRPYLRIFENLLVDLTSPDPILEHVSNHILFCFVNA 2179
Query: 1915 FHVLQPLKVPAFSFAWLELVSHRSFMPKLLI 1945
LQP K P F FAWL+L+SH+SFMPKLLI
Sbjct: 2180 LATLQPQKYPGFCFAWLDLLSHKSFMPKLLI 2210
Score = 203 (76.5 bits), Expect = 4.0e-300, Sum P(5) = 4.0e-300
Identities = 67/301 (22%), Positives = 139/301 (46%)
Query: 1404 AGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVHIGA---ADGGILHNSESESVNAAFTP 1460
AG T S +D+ SG +ST G +S LV IL + + +
Sbjct: 1705 AGETDNLTASPTNDIVSGAIKST--GVMSQQLVQQQMQQQVSQQILQQQQQQQIQMQLLQ 1762
Query: 1461 AATELYAADSTEPV-KEPGASSQSLPSTAAPERIGSSILEPSLQTRDALDKYHIVAQKLD 1519
+ A + + ++ Q + + + +L D L+K+ ++ ++D
Sbjct: 1763 QQAQQAALQAAQQQHQQQQQQQQQVQQQQQQVQQQQQQQQQNLPNSDLLEKFGLLLNEVD 1822
Query: 1520 ALI-----GNDAREAEVQGVISE-VPEIILRCISRDEAALAVAQKVFKGLYENASNNLHF 1573
++ E E+ IS+ + ++ S+ E AQ++ L E + +
Sbjct: 1823 KVVIRVLAQTQNIELELLYTISQQILTLVRMSQSQSELLAGFAQRLCNRLCEQEKKPI-Y 1881
Query: 1574 SAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKL 1633
+ +L +RD + V+ +TS++++S ++K NR + GLI +L+N+ EY++ ++K+
Sbjct: 1882 EIYFELLEVLRDWDQKVITTITSFLLFSTPDKKLNRVLVAGLIIHQLININEYDLALSKM 1941
Query: 1634 IDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLAAKPGSPESLQQLIEIVR 1693
+ R+ +FAISLL+ + + + +SE + D L K++++ S E L + +E ++
Sbjct: 1942 MIDSRSAPPIDFAISLLRFCLVENNYANLSEFPSTFDLLQKISSRSPS-EMLAKTLEEIK 2000
Query: 1694 N 1694
N
Sbjct: 2001 N 2001
Score = 86 (35.3 bits), Expect = 1.5e-239, Sum P(5) = 1.5e-239
Identities = 24/127 (18%), Positives = 61/127 (48%)
Query: 28 QRSSDLSKHVDSLMQILSLLQS-KDHTQFVLNPVLPDELHDATSLRDLDLFHECRDDD-- 84
Q++S ++ +++ LQS L+P++ ++ + + + D+
Sbjct: 330 QQNSQQQQNQQHYSEVIKYLQSISPPNSLALSPLVDNDQSSGSGGGGITNSKRLQQDNPS 389
Query: 85 -FDDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHA 143
+ I++++ ++ +++ +GY + AS K+IL F LTE +++I+ ++A +
Sbjct: 390 YVNSIISKVSQQNVPYQIISSIGYSSCSSASTLKDILFQFQKLTESDIAQIIVSMAELTS 449
Query: 144 GLEDNQN 150
+N N
Sbjct: 450 NTNNNNN 456
Score = 55 (24.4 bits), Expect = 1.1e-122, Sum P(4) = 1.1e-122
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 1638 RNKAATEFAISLLQTLVTDES-RVVISEL---HNL--VDALAKLAAKPGSPESLQQLIEI 1691
+NK E +L QTL++ + + ++S+L H L + +A + K P+ L +L+++
Sbjct: 688 KNKLQNELLTTLFQTLLSQHNYQSIVSQLWKDHPLTVIQIMADITQK--DPKELSRLLDV 745
Query: 1692 VR 1693
+
Sbjct: 746 AQ 747
Score = 50 (22.7 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 28/111 (25%), Positives = 48/111 (43%)
Query: 991 PNPWTMAI-LGLLAEIYSMPNLKMN-------LKFDIEVLFKNLGVD--MKDITPTSLLK 1040
P+P+T + + +L +I P + N LK +I+ FKN G + D+ LL
Sbjct: 2296 PDPFTPNLKIDMLPDINQPPKISSNFTASLKGLKIEIDNYFKNRGPYSFLLDLKNKHLLL 2355
Query: 1041 DRKREI-----EGNPDFSNKDVGASQPQLVPEV-KPAIVSPLGHVDLPLDV 1085
K EI + N N V +P++ + + V+P P+D+
Sbjct: 2356 TDKEEILAAGTKYNVPLINSLVLYIGTLAIPQIQRKSGVAPTPSQSAPMDI 2406
Score = 49 (22.3 bits), Expect = 5.6e-183, Sum P(5) = 5.6e-183
Identities = 20/69 (28%), Positives = 29/69 (42%)
Query: 795 ARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKI-SFIINNISALNVEAKA 853
A P + + + F NI + AE T PA EV+D+ S+ I S E
Sbjct: 857 AAPDQ-IPTDLFNDLKNISAALQTAESETTERRFPA-EVEDETNSYFIKLYSG---EISV 911
Query: 854 KEFTEILKE 862
+ +LKE
Sbjct: 912 DQIISVLKE 920
Score = 48 (22.0 bits), Expect = 3.7e-118, Sum P(3) = 3.7e-118
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 1654 VTDESRVVISELHNLVDALAKLAAKPGSPESLQQLI 1689
+++ S V+ +++ NL+ L K + K S E L Q+I
Sbjct: 89 ISNLSFVIATQIKNLISNLTKKSYKSNSSE-LSQII 123
Score = 42 (19.8 bits), Expect = 1.5e-121, Sum P(5) = 1.5e-121
Identities = 13/62 (20%), Positives = 31/62 (50%)
Query: 1600 YSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESR 1659
Y D+E K + LI+++L++ V + +++ R + I + +L++ +R
Sbjct: 950 YPDKELKITGLLFGSLIKNQLISSQPLRVALKYVLEAMRFPLNSNMFIFGVNSLISFANR 1009
Query: 1660 VV 1661
+V
Sbjct: 1010 LV 1011
Score = 41 (19.5 bits), Expect = 1.7e-239, Sum P(4) = 1.7e-239
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 1644 EFAISLLQTLVTDESRVVISEL 1665
+FA S+++T T+++ + I E+
Sbjct: 1613 DFACSIVETAATEKAIISIDEV 1634
Score = 39 (18.8 bits), Expect = 2.7e-239, Sum P(4) = 2.7e-239
Identities = 9/39 (23%), Positives = 19/39 (48%)
Query: 1235 GSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQ 1273
G ++ ++ ++ +S Q+ Q I +LL+Q Q
Sbjct: 1728 GVMSQQLVQQQMQQQVSQQILQQQQQQQIQMQLLQQQAQ 1766
Score = 39 (18.8 bits), Expect = 5.5e-178, Sum P(4) = 5.5e-178
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 1039 LKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGH 1078
+ + KR + NP + N + Q VP I+S +G+
Sbjct: 377 ITNSKRLQQDNPSYVNSIISKVSQQNVPY---QIISSIGY 413
Score = 39 (18.8 bits), Expect = 5.5e-178, Sum P(4) = 5.5e-178
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 889 KFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLT 941
K L + N +N I + + +N + S + SS S LK++ KLT
Sbjct: 381 KRLQQDNPSYVNSIISKVSQQNVPYQIISSIGYSSCSSASTLKDILFQFQKLT 433
Score = 38 (18.4 bits), Expect = 9.4e-183, Sum P(3) = 9.4e-183
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 1709 KDDKARQSKDKKAYSHTTANREDYNIP-ESVDPDPV 1743
KDD R+ + A+S T N E + PD +
Sbjct: 1211 KDDDKRKKDQEDAFSTTIPIGTLLNASKEMIQPDDI 1246
Score = 38 (18.4 bits), Expect = 2.0e-55, Sum P(3) = 2.0e-55
Identities = 10/54 (18%), Positives = 24/54 (44%)
Query: 1854 LLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQI 1907
LL I+ K +L+ ++ K P P+ + ++++ L + F++
Sbjct: 1381 LLIAIVPFVAK-LLEHCQQSKVFRPPNPWVMAILRLMVEIYQLKESKNNIKFEV 1433
Score = 38 (18.4 bits), Expect = 2.5e-55, Sum P(3) = 2.5e-55
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 1885 LFINWLLDMSSLDPVADGSNFQ 1906
L +N +++ S DP+ +G FQ
Sbjct: 1035 LSVNKIIESS--DPIKNGMEFQ 1054
Score = 37 (18.1 bits), Expect = 1.0e-155, Sum P(4) = 1.0e-155
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1857 KILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLD 1897
K++T F+L +KK N L I+ L++++ D
Sbjct: 1897 KVITTITSFLLFSTPDKK--LNRVLVAGLIIHQLININEYD 1935
Score = 37 (18.1 bits), Expect = 2.7e-138, Sum P(5) = 2.7e-138
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 1246 LRGS-ISSQLRNSLQGLTIASELLEQAVQLVTNDNL 1280
L GS I +QL +S Q L +A + + +A++ N N+
Sbjct: 961 LFGSLIKNQLISS-QPLRVALKYVLEAMRFPLNSNM 995
Score = 37 (18.1 bits), Expect = 2.5e-55, Sum P(3) = 2.5e-55
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 2106 RYNVPLINSLVLYVGMQAIHQL----QTRTSHAQ 2135
R +P I+ VL+ Q +H L + R H++
Sbjct: 1307 RLCIPTISERVLFHSHQNVHTLLKSEKIRVDHSE 1340
>UNIPROTKB|E1BXD4 [details] [associations]
symbol:LOC100858397 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005778 "peroxisomal membrane" evidence=IEA]
GO:GO:0005778 GO:GO:0000932 OMA:YLKARAP InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 EMBL:AADN02051617 EMBL:AADN02051618
IPI:IPI00596498 Ensembl:ENSGALT00000040121 ArrayExpress:E1BXD4
Uniprot:E1BXD4
Length = 2129
Score = 1362 (484.5 bits), Expect = 3.9e-297, Sum P(5) = 3.9e-297
Identities = 280/542 (51%), Positives = 359/542 (66%)
Query: 1741 DPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLT 1797
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR T
Sbjct: 1597 DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCT 1656
Query: 1798 E--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIF 1853
E V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1657 EMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKIN 1714
Query: 1854 LLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFAN 1913
LL+K+L + V +L+D E ++ F PY R+FI LL++++ + V + NFQ L+AF N
Sbjct: 1715 LLNKVLGIVVGVLLQDHEVRQGEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCN 1774
Query: 1914 AFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRN 1972
FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLRN
Sbjct: 1775 TFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRN 1834
Query: 1973 AELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMR 2032
EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMR
Sbjct: 1835 VELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMR 1894
Query: 2033 LPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQK 2092
LPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 1895 LPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRSN 1952
Query: 2093 LLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAAL 2152
L + + G RYN+ LIN+LVLYVG QAI +H + G+ S++ SA +
Sbjct: 1953 LQV----SNEPGNRYNIQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHM 2001
Query: 2153 DIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVL 2212
DIFQ L DLDTEGRYLFLNA ANQLRYPN+HTHYFS +LYL+AEAN E IQEQITRVL
Sbjct: 2002 DIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVL 2061
Query: 2213 FERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDD 2272
ERLIVNRPHPWGLLITFIELIKNP + FWN F+ CAPEIEKLF+SVA+ C G K
Sbjct: 2062 LERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQ 2121
Query: 2273 SM 2274
M
Sbjct: 2122 VM 2123
Score = 1017 (363.1 bits), Expect = 6.0e-257, Sum P(5) = 6.0e-257
Identities = 250/664 (37%), Positives = 377/664 (56%)
Query: 1516 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1570
Q L ++ A + Q + S + +++ SRD AAL + QK +GL + S
Sbjct: 1374 QHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL 1433
Query: 1571 -LHF-SAHLAILAAIRDV----CKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLA 1624
L + HL +L A++D K++T +I +E K+N + LIR+ L+N+
Sbjct: 1434 LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ 1493
Query: 1625 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDE---SRVVISELHNLVDALAKLAA--KP 1679
+Y++H+A+ ++ G N A FA+ L++ L+ DE + V ++L + ++ L ++ A +
Sbjct: 1494 QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG 1553
Query: 1680 GSPESLQQLIEIVRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYNIPESVD 1739
+PE L QL+E+VR+ D+A + +S + E Y+
Sbjct: 1554 NAPEGLPQLMEVVRSNYEAMI----------DRAHGGPNFMMHSGISQASE-YD------ 1596
Query: 1740 PDPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRL 1796
DP G E+ L EW Y + A + +V Q+HQ G+LK DD+ RFFR
Sbjct: 1597 -DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLC 1655
Query: 1797 TE--VSVAHCLSSEVI-NPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKI 1852
TE V +++ +E NP + +D + +L+ ++K + +KI
Sbjct: 1656 TEMCVEISYRAQAEQQHNPAANPTMIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKI 1713
Query: 1853 FLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFA 1912
LL+K+L + V +L+D E ++ F PY R+FI LL++++ + V + NFQ L+AF
Sbjct: 1714 NLLNKVLGIVVGVLLQDHEVRQGEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFC 1773
Query: 1913 NAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLR 1971
N FH+L+P K P F +AWLEL+SHR F+ ++L Q KGWP +LL++L ++L PFLR
Sbjct: 1774 NTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLR 1833
Query: 1972 NAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNM 2031
N EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNM
Sbjct: 1834 NVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNM 1893
Query: 2032 RLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQ 2091
RLPDP TPNLK+D+L EI PRI + + Q + D+D YLKT P +FLS+L+
Sbjct: 1894 RLPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSDLRS 1951
Query: 2092 KLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSH-AQSTGNNSSLTAFLVSA 2150
L + + G RYN+ LIN+LVLYVG QAI + + S + ST +S+ +
Sbjct: 1952 NLQV----SNEPGNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNL 2007
Query: 2151 ALDI 2154
A+D+
Sbjct: 2008 AVDL 2011
Score = 550 (198.7 bits), Expect = 3.9e-297, Sum P(5) = 3.9e-297
Identities = 126/349 (36%), Positives = 195/349 (55%)
Query: 761 GQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAE 820
GQ S++ T++ K ++ P +S PS T NI+TL+ A +
Sbjct: 785 GQVSTIVTTSTTTTVAKTIT-ITRPTGVSFKKDVP-PSINTT--------NIDTLLVATD 834
Query: 821 RRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIE 880
+ E +E P + VQ+KI+FI NN+S N+ K +E E +KE++ PW +QY+VMKR SIE
Sbjct: 835 QTERIVEPPEN-VQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIE 893
Query: 881 PNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKL 940
PNFH LY FLD + + N+ ++ TY N KVLL S+ ++ +RSLLKNLG WLG +
Sbjct: 894 PNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMI 953
Query: 941 TIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAYQPPNPWTMAI 998
T+ +N+ + ++D KSL++EAY KG ++ V+PF +K+LE S+ ++PPNPWTMAI
Sbjct: 954 TLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTMAI 1013
Query: 999 LGLLAEIYSMPNLKMNLKFDIEVLFKNLGVD---MKDITPTSLLKDRKR--EIEGNPDFS 1053
+ +LAE++ +LK + D ++ F L + + + P SLLKD+ R ++
Sbjct: 1014 MNVLAELHQEHDLKKGVVKD-QISFLALSCEELGIASLEPGSLLKDKDRLKNLDEQLSAP 1072
Query: 1054 NKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYA 1102
KDV QP+ +P + S PP H ++ Y+
Sbjct: 1073 KKDV--KQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYS 1119
Score = 438 (159.2 bits), Expect = 3.9e-297, Sum P(5) = 3.9e-297
Identities = 116/424 (27%), Positives = 207/424 (48%)
Query: 95 EMSMGDVMNELGYGCSADASQCKEILSLF--TPLTEITLSRILGAIARTHAGLEDNQNTF 152
E S+ D M E+GYG +C+ I+ F +T ++R+LG +ARTH+GL D
Sbjct: 3 ESSLADFMQEVGYGFCTSIEECRNIIMQFGVREVTAAQVARVLGMMARTHSGLTDGIPLQ 62
Query: 153 STFTLALGC----STMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTE 208
S G SD +WNV+VL+ +K+L P+ ++ V LD+ GF I
Sbjct: 63 SISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYELDHPGFQIRDS 122
Query: 209 EAFSFFM-SVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLP 267
+ + + + E FP++A+ WK+ EGQLSF+++++ +P ++F FA
Sbjct: 123 KGLHIVVFGIQRGLGMEVFPVNAIYRP-WKHAEGQLSFIQHSLINP-DIFCFADYPCHAV 180
Query: 268 YVDAVPGLKLQSGQANHAWXXXXXXXXXXXXSEMGHASFARSMLEYPLKQCPEMLLLGMA 327
D + + W +E+G + + +P+K CP+ML+L +
Sbjct: 181 TTDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDMLVLALL 240
Query: 328 HINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHI-WH---VNPNI---VLRGFVD----A 376
INT+++ +++E+ + P+ + + ++ +ILH WH +P+I ++ +
Sbjct: 241 QINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMAEWYMRG 300
Query: 377 QNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYK 436
+ + RIL++ Q+LK LS +L P F I LA +AS++E + L+KWL+ + +
Sbjct: 301 EQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTDKIREHG 360
Query: 437 DVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGLITSTKL 496
+ F + C+ F+K + + A L E + +L L+A G + S +L
Sbjct: 361 EPFIQACMTFLKRRCPSILGGLAPEKDQPKSA--QLPPETLATMLACLQACAGSV-SQEL 417
Query: 497 SEEI 500
SE I
Sbjct: 418 SETI 421
Score = 405 (147.6 bits), Expect = 3.9e-297, Sum P(5) = 3.9e-297
Identities = 75/157 (47%), Positives = 114/157 (72%)
Query: 525 SEGYADDIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLF 580
++ ++ +I+ EANSYF ++++ ++++ +++ML RFK+S++KRE +F CM+ NLF
Sbjct: 588 NQNFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLF 647
Query: 581 EEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTK 640
EEYRFFP+YP+++L I A LFG II+ LVT++ LG+ALR VL+ALRKP SKM+ FG
Sbjct: 648 EEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIA 707
Query: 641 ALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIE 677
AL++F +RL ++PQYC H+ ISH L +IE
Sbjct: 708 ALDRFKNRLKDYPQYCQHLASISHFIQFPHHLQEYIE 744
Score = 330 (121.2 bits), Expect = 3.9e-297, Sum P(5) = 3.9e-297
Identities = 74/225 (32%), Positives = 126/225 (56%)
Query: 1140 QSPFSVSQLST-PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSV 1198
Q +S ++ + + H+ +N + H ++ V A++RA++E+V +V RS+
Sbjct: 1107 QPQYSYHDINVYSLGGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSI 1166
Query: 1199 SIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL 1258
IA T +++V KD+A++S+E+R+ AAH M+ +L +A +TC+EPL SI++ L+NS
Sbjct: 1167 KIAMTTCEQIVRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSF 1226
Query: 1259 Q-GLTIAS----ELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKH 1313
L AS +++EQA + DN +L C I++ A +KA +D +A + LR KH
Sbjct: 1227 ATALRAASPQQRDMMEQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELR-KH 1285
Query: 1314 REGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR 1358
G + DP + + +PE +R K G + Q VYE+F R
Sbjct: 1286 ARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFAR 1330
Score = 49 (22.3 bits), Expect = 4.8e-70, Sum P(4) = 4.8e-70
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 2198 EANQEIIQEQITRVLFERLIVNR----PHPWGLLITFIELIKNPRYN 2240
E +E ++E+ + + L++ R P+ L F++ +KNP +N
Sbjct: 867 EELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFN 913
Score = 43 (20.2 bits), Expect = 1.6e-134, Sum P(2) = 1.6e-134
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 1553 LAVAQKVFKGLYENASNNLHFSAH-LAILAAIRDVCKLVVKELTSWVIYSDE--ERKFNR 1609
++ +F G + N++ LH++ H +IR +L++ + W + ++ + K +R
Sbjct: 254 ISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIR---QLIMHAMAEWYMRGEQYDQAKLSR 310
Query: 1610 --DITMGL-IRSELLN 1622
D+ L S LLN
Sbjct: 311 ILDVAQDLKALSMLLN 326
Score = 41 (19.5 bits), Expect = 8.5e-213, Sum P(5) = 8.5e-213
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 1418 VASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEP 1477
V++ T ST+ T + I G S+N T T L A D TE + EP
Sbjct: 787 VSTIVTTSTTTTVAKT--ITITRPTGVSFKKDVPPSINT--TNIDTLLVATDQTERIVEP 842
Query: 1478 GASSQ 1482
+ Q
Sbjct: 843 PENVQ 847
Score = 40 (19.1 bits), Expect = 1.4e-174, Sum P(4) = 1.4e-174
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 1460 PAATELYAADSTEPVKEPGASSQSLPSTAAPERIGSSILEPSL 1502
P+A+ L A + G +S SL +AAP P+L
Sbjct: 449 PSASSLDAISPVQIDSLAGMASLSLGGSAAPHTQSMQGFPPNL 491
Score = 38 (18.4 bits), Expect = 2.3e-266, Sum P(5) = 2.3e-266
Identities = 27/116 (23%), Positives = 46/116 (39%)
Query: 1573 FSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSEL-LNLAEYNVHMA 1631
F AH + +R + V+EL V+ D K ++R + L+ E + +A
Sbjct: 1136 FQAHPQLKQCVRQAIERAVQELVHPVV--DRSIKIAMTTCEQIVRKDFALDSEESRMRVA 1193
Query: 1632 KLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLAAKPGSPESLQQ 1687
RN A I+ + L+ + + L N A A AA P + ++Q
Sbjct: 1194 AH-HMMRNLTAGMAMITCREPLLMS----IATNLKNSF-ATALRAASPQQRDMMEQ 1243
Score = 38 (18.4 bits), Expect = 1.8e-212, Sum P(5) = 1.8e-212
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1234 AGSLAHVTCKEPLRGSISSQLRNSLQGLTIASEL 1267
A + A V K PL G +S+ + S T+A +
Sbjct: 771 AQAQAQVPAKAPLAGQVSTIVTTSTT-TTVAKTI 803
>FB|FBgn0085436 [details] [associations]
symbol:Not1 "Not1" species:7227 "Drosophila melanogaster"
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IMP] [GO:0030014 "CCR4-NOT complex"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] EMBL:AE013599 GO:GO:0005737
GO:GO:0007095 GO:GO:0048813 GO:GO:0007517 GO:GO:0030014
GO:GO:0000289 KO:K12604 OMA:YLKARAP InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 UniGene:Dm.4102 GeneID:5740252
KEGG:dme:Dmel_CG34407 CTD:5740252 FlyBase:FBgn0085436 ChiTaRS:NOT1
GenomeRNAi:5740252 NextBio:20891292 RefSeq:NP_001097242.1
RefSeq:NP_724798.3 STRING:A8DY81 EnsemblMetazoa:FBtr0112672
EnsemblMetazoa:FBtr0304957 UCSC:CG34407-RC PhylomeDB:A8DY81
Bgee:A8DY81 Uniprot:A8DY81
Length = 2505
Score = 1358 (483.1 bits), Expect = 3.5e-270, Sum P(5) = 3.5e-270
Identities = 331/841 (39%), Positives = 464/841 (55%)
Query: 1452 ESVNAAFTPAATELYAADSTEPVKEPGASSQSLPSTAAPERIGSSILEPSLQTRDALDKY 1511
E+V A LYA S PG S A + + +P++ D Y
Sbjct: 1664 EAVRIKVGAAPATLYAVYSEFARSIPGFQQMSDRDIALFVPKPTDLSQPNVFANDDSMVY 1723
Query: 1512 HIVAQKLDALIGNDAREAEVQGVISEVPEIILRCIS----RD-EAALAVAQKVFKGLYEN 1566
+A K++A + +Q S++ ++ I+ RD E+A + + +GL E
Sbjct: 1724 GELASKMEAFMNTAIGVPTLQIQASKMHMLLNALIATRRLRDQESAFNLLTRAVEGLTEG 1783
Query: 1567 ASN--------NLHFSAHLAILAAIRDVCKLVVKELTSWVIYSD--EERKFNRDITMGLI 1616
N ++ + HL IL + + E + D EE ++N + LI
Sbjct: 1784 LVNMHENMEQMKMYQNIHLRILGLLNNSFGAPNTERAVTKCFFDIREEVRYNVEAARALI 1843
Query: 1617 RSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRV-VIS--ELHNLVDALA 1673
S +NL +++ + +D G N A F I+LL+ L+ D+ + ++S E V+ L
Sbjct: 1844 TSHFVNLNQFDGMLRDCMDNGNNYVAISFGIALLERLIMDDRVINIVSDNEFMATVELLG 1903
Query: 1674 KLAA-KPGSPESLQQLIEIVRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDY 1732
+L + PE + I+ + + D R Y H+ +
Sbjct: 1904 RLTQHRHRYPECIVNAIDTLWSGNFNSSSDYSPFNGND---RYLSGASHYIHSGM----H 1956
Query: 1733 NIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTR----YVLQLHQNGLLKGDDM 1788
++ DP G E+ L +W + R +V +++ G+LK DD+
Sbjct: 1957 HVRSCDTDDPPGLQEKTEFLLKDWVALYTQQNQQSTRDARNFGAFVQKMNTYGILKTDDL 2016
Query: 1789 TDRFFRRLTEV--SVAHCLSSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVE 1846
RFFR+ T + V + + +E P F ID + L+ +++ E
Sbjct: 2017 ITRFFRQATHICTDVVYRMFAEPSLP-----INQAKNKIFQWIDAFVHLIAMLVRHSG-E 2070
Query: 1847 QGS--SKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSN 1904
G+ +KI LL+K+L + + ++KD E + SF Y R F+ +++ + D + +
Sbjct: 2071 AGNPTTKINLLNKVLGIVLGTLIKDHEMRGVSFQQVGYHRFFMMLFMELCTADVILESLM 2130
Query: 1905 FQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIG-NGQKGWPYIQRLLVNLL 1963
I+SAFA +H+L P P F FAWLEL+SHR F+ ++L+ GQKGWP +LL +L
Sbjct: 2131 HSIVSAFAYTYHLLNPSVAPGFCFAWLELISHRVFLGRILVQIPGQKGWPLYAQLLQDLF 2190
Query: 1964 QFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNII 2023
++L PFLRN ELG PV+ LYKGTLRVLLVLLHDFPEFLCDYHF FCD IPP+C+QMRNII
Sbjct: 2191 KYLAPFLRNTELGKPVQLLYKGTLRVLLVLLHDFPEFLCDYHFGFCDTIPPNCVQMRNII 2250
Query: 2024 LSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGS 2083
LSAFPRNMRLPDP TPNLK+D+L + + P++ S ++ + D+D YLK P
Sbjct: 2251 LSAFPRNMRLPDPFTPNLKVDMLSDSSNAPKVLSSYIMNIQPANFKKDLDSYLKARAP-V 2309
Query: 2084 SFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSL 2143
+FLSEL+ L + SE GTRYN+ L+N+LV+YVG QAI ++ + + +T N +
Sbjct: 2310 TFLSELRGHLQVT-SEP---GTRYNMALMNALVMYVGTQAIALIRNK-NFVPNTSNIAH- 2363
Query: 2144 TAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEI 2203
SA +DIFQ L DLDTEGRYLFLNA ANQLRYPN+HTHYFS +L+L+AEAN E
Sbjct: 2364 -----SAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANSEA 2418
Query: 2204 IQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARS 2263
IQEQITRVL ERLIVNRPHPWGLLITFIELIKNP Y FW+ F+ CAPEI KLFESVARS
Sbjct: 2419 IQEQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHDFVHCAPEITKLFESVARS 2478
Query: 2264 C 2264
C
Sbjct: 2479 C 2479
Score = 818 (293.0 bits), Expect = 3.5e-270, Sum P(5) = 3.5e-270
Identities = 207/594 (34%), Positives = 317/594 (53%)
Query: 795 ARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAK 854
A S +A NI+TL+ A +E + P VQDK +FI NN+S LN+ K
Sbjct: 1118 AAVSHATRMKSIANATNIDTLLVA--NQEEKVTVPPEPVQDKTAFIFNNLSQLNIPQKCD 1175
Query: 855 EFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVL 914
E EI+ ++Y+PW AQY+V+KRAS+E NFH LY FLD + + +NR + + T N KVL
Sbjct: 1176 EIKEIMTKEYWPWLAQYLVLKRASMEFNFHTLYYNFLDALKNGEINRFVTKETLRNIKVL 1235
Query: 915 LGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVI 972
L S+ + +RSLLKNLG WLG +T+GRN+ + ++D KSL+ EAY KG ++ V+
Sbjct: 1236 LRSDKGVINFSDRSLLKNLGHWLGMMTLGRNRPILQLDLDLKSLLAEAYHKGQQELLFVV 1295
Query: 973 PFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKD 1032
PF +KILE S ++ PNPWTM I+ +LAE++ P+LK+NLKF+IEVL K L +++
Sbjct: 1296 PFVAKILESSAKSRIFRSPNPWTMGIMYVLAELHQEPDLKLNLKFEIEVLCKTLNLELAK 1355
Query: 1033 ITPTSLLKD--RKREIE---GNPDFSNKDVGASQPQLVPEVK-PAIVSPLGHVDLP--LD 1084
+ LKD R IE P + AS P L E + PA P P
Sbjct: 1356 LRQVIYLKDPNRTHRIEEQMSQPKPKQLEPVASAPALPREQQSPAQPPPPPQQQQPPQQQ 1415
Query: 1085 VASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQSQSPFS 1144
V PP+S +Q AA + +++G + S LP+ + +S
Sbjct: 1416 VPPPPSSADVD---AQNAAAMMMAAGGANSTPGSVS---SPNLPTDSSQVALPPPEPRYS 1469
Query: 1145 VSQLSTP-IPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQ 1203
++ IG +++ L + + +V A++R I + + IV RS+ IA
Sbjct: 1470 YVDVNVSNFQLIGQQLVLPPNTPFLHANPGIKHMVVNAVERTITDWLQPIVDRSIRIACA 1529
Query: 1204 TTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSL----Q 1259
TT++++ KD+A+++DE R+ AAH MV +LA +A +T K+ + +IS L +L
Sbjct: 1530 TTEQIIRKDFALDADENRMRTAAHQMVRNLAAGMAMITGKDEIARAISQNLHKALLSGLN 1589
Query: 1260 GLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGS 1319
G+ +E+ A+QL + +N++L CA I++ + +KA ID ++ R+ RE G+
Sbjct: 1590 GMPSMAEIQAAAMQLAS-ENVELVCAFIQKTSAEKAAAEIDRRLSTDFETRKIAREE-GN 1647
Query: 1320 SFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVR-LPWQNQSSQGSHAM 1372
F D I +PEA+R K G + VY +F R +P Q S A+
Sbjct: 1648 RFVDAQILTYQQERLPEAVRIKVGAAPATLYAVYSEFARSIPGFQQMSDRDIAL 1701
Score = 359 (131.4 bits), Expect = 3.5e-270, Sum P(5) = 3.5e-270
Identities = 73/152 (48%), Positives = 103/152 (67%)
Query: 531 DIEAEANSYFHQMFSGQ----LTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFF 586
++E E NSYF ++++ Q L+I+ ++ +L RFKESS +RE +F CM+ NLFEEYRFF
Sbjct: 911 EVEDEVNSYFQRIYNHQPNPTLSIDEVLDILQRFKESSNRREQEVFLCMLRNLFEEYRFF 970
Query: 587 PKYPERQLRIAAVLFGSIIKHQLV-THLTLGIALRGVLDALRKPADSKMFVFGTKALEQF 645
+YPE++L+I A LFG II LV T + LG++LR VLDALRKP SK++ FG AL++F
Sbjct: 971 CQYPEKELQITAQLFGGIIDRNLVPTFVALGLSLRCVLDALRKPDGSKLYYFGVTALDRF 1030
Query: 646 VDRLIEWPQYCNHILQISHLRSTHAELVAFIE 677
RL + +YC HI I H L+ ++E
Sbjct: 1031 RTRLHTYNKYCEHIRSIPHFSDFPPHLIQYVE 1062
Score = 262 (97.3 bits), Expect = 3.5e-270, Sum P(5) = 3.5e-270
Identities = 70/286 (24%), Positives = 132/286 (46%)
Query: 172 SWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYAC-QEPFPLHA 230
+W DV V+A+K++ P NW V LD+ F + +++ + A FP H
Sbjct: 410 TWKPDVFVQALKEVVPQLNWKDVCMELDHPEFVLKDRIGLELLLTILRLATGSNIFP-HP 468
Query: 231 VC-GSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWXXX 289
C W NTEGQLS + + +P ++F+FA P +D + + +W
Sbjct: 469 ECIYRHWANTEGQLSLIATMLKNP-DLFSFADFVFSQPALDVLKTAPDADNKEISSWKSL 527
Query: 290 XXXXXXXXXSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMII 349
++ G+ + + ++P + CP++L L + + + ++ ++ + P +
Sbjct: 528 HLVEVLLSIADKGYYTQVHELFKFPAQNCPDVLFLALLNTSPPMTPLRQDLFNQLIPTFL 587
Query: 350 KSTMSNGMIL-HIWHVNPNIVLRG---------FVDAQNMEPDCTIRILEICQELKILSS 399
+ ++ +IL W N N LR ++ + RIL++ Q+LK LS+
Sbjct: 588 GNHPNSNVILASAWSSN-NFQLRSNIMNAMSEWYLRGNEFDQVKLSRILDLAQDLKALSA 646
Query: 400 VLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLK 445
+L F I LA +AS++E + LEKWL+ + + + F + +K
Sbjct: 647 LLNARSFLFIIDLACLASRREYLKLEKWLTDKIREHGEPFMQAIIK 692
Score = 63 (27.2 bits), Expect = 3.1e-47, Sum P(5) = 3.1e-47
Identities = 70/299 (23%), Positives = 115/299 (38%)
Query: 1845 VEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWL--LDMSSLDPVADG 1902
++ G F+ + L +K +L+ +++ +F+ R + +WL + + P+
Sbjct: 1215 LKNGEINRFVTKETLR-NIKVLLR-SDKGVINFSDRSLLKNLGHWLGMMTLGRNRPILQ- 1271
Query: 1903 SNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPY-IQRLLVN 1961
+ + S A A+H Q + F ++ + S K I W I +L
Sbjct: 1272 LDLDLKSLLAEAYHKGQQELL--FVVPFVAKILESS--AKSRIFRSPNPWTMGIMYVLAE 1327
Query: 1962 LLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFC---DVIPPSCIQ 2018
L Q EP L+ L + L K TL + L L +L D + T + P Q
Sbjct: 1328 LHQ--EPDLK-LNLKFEIEVLCK-TLNLELAKLRQVI-YLKDPNRTHRIEEQMSQPKPKQ 1382
Query: 2019 MRNIILS-AFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFS-EVDAALRAKQMRADVDDYL 2076
+ + + A PR + P P + P+ + PP S +VDA A M A
Sbjct: 1383 LEPVASAPALPREQQSPAQPPPPPQQQQPPQQQVPPPPSSADVDAQNAAAMMMAAGGANS 1442
Query: 2077 KTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLIN-SLVLYVGMQAIHQLQTRTSHA 2134
G S L ++ LPP E RY+ +N S +G Q + T HA
Sbjct: 1443 TPGSVSSPNLPTDSSQVALPPPEP-----RYSYVDVNVSNFQLIGQQLVLPPNTPFLHA 1496
Score = 60 (26.2 bits), Expect = 1.7e-157, Sum P(4) = 1.7e-157
Identities = 30/108 (27%), Positives = 41/108 (37%)
Query: 1061 QPQLVPEVKPAIVSPLGH--VDLPLDVASPPN----SGG-PTHLLSQYAAPLRLSSGTLM 1113
QP LVP P I+ GH +DLP + PP SG + PL S L
Sbjct: 767 QPGLVPPPPPTILR--GHRGMDLPGGIVPPPPQQPFSGNLNAQMFGPGMDPLTNMSNNLA 824
Query: 1114 E---DEKLAALGISDQLPSAQGLFQASQSQSPFSVSQL--STPIPNIG 1156
A + L S L + P ++ Q+ + P PN+G
Sbjct: 825 GLNLSGPNGAFNFGNMLTSPSRLMTPGANPYPLNLMQMPQAPPPPNVG 872
Score = 50 (22.7 bits), Expect = 3.5e-270, Sum P(5) = 3.5e-270
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 104 ELGYGCSADASQCKEIL-SLFTPLTEIT---LSRILGAIARTHAGLED-NQN 150
E+GY ++ +CK L S E+ +++I+G + R H+ L D N N
Sbjct: 296 EIGYEFTSSVEECKNHLCSRERERAELQSKDVAKIVGLMCRRHSSLLDCNVN 347
Score = 47 (21.6 bits), Expect = 9.3e-134, Sum P(2) = 9.3e-134
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 1400 YSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVHIGAAD 1442
Y S+ + S A TT S S+ F + +L +G D
Sbjct: 225 YGSTTATIAGAGASETDAEAEATTNSNSSSFEADALNEVGIED 267
Score = 46 (21.3 bits), Expect = 1.5e-134, Sum P(3) = 1.5e-134
Identities = 18/79 (22%), Positives = 33/79 (41%)
Query: 782 VSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKISFII 841
V A ++ + F R + + F T +A A ET EA A+ + SF
Sbjct: 199 VEAQFLIKLREEFPRQAVPLVLAPFLYGSTTAT-IAGAGASETDAEAEATTNSNSSSFEA 257
Query: 842 NNISALNVEAKAKEFTEIL 860
+ ++ + +E +EI+
Sbjct: 258 DALNEVGIEDIYDHLSEII 276
Score = 46 (21.3 bits), Expect = 1.7e-45, Sum P(5) = 1.7e-45
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 2167 RYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRV 2211
+YL L A+ + + HT Y++F+ E N+ + +E + +
Sbjct: 1191 QYLVLKRASMEFNF---HTLYYNFLDALKNGEINRFVTKETLRNI 1232
Score = 45 (20.9 bits), Expect = 5.1e-247, Sum P(4) = 5.1e-247
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 495 KLSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYADDIEAEANS 538
KL EE + QAV L P L A + + D EAEA +
Sbjct: 206 KLREEFPR-QAVPLVLAPFLYGSTTATIAGAGASETDAEAEATT 248
Score = 44 (20.5 bits), Expect = 8.1e-156, Sum P(4) = 8.1e-156
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 607 HQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLR 666
HQ+V +L G+A+ D + + + KAL + L P L
Sbjct: 1553 HQMVRNLAAGMAMITGKDEIARAISQNLH----KAL---LSGLNGMPSMAEIQAAAMQLA 1605
Query: 667 STHAELV-AFIERALARISSGHLE 689
S + ELV AFI++ A ++ ++
Sbjct: 1606 SENVELVCAFIQKTSAEKAAAEID 1629
Score = 44 (20.5 bits), Expect = 2.7e-45, Sum P(5) = 2.7e-45
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 1965 FLEPFLRNAELGVPVRFLYKGTLRVLLVLL 1994
FL+ L+N E+ RF+ K TLR + VLL
Sbjct: 1211 FLDA-LKNGEIN---RFVTKETLRNIKVLL 1236
Score = 42 (19.8 bits), Expect = 4.5e-133, Sum P(3) = 4.5e-133
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 1394 GQGNQGYSSSAGSTGFDAVSRPSDVASGTTESTSAG 1429
GQG G S+S+GS+ + + S S G
Sbjct: 357 GQGQGGGSNSSGSSQTQITPQQQNPGSSNNNDGSDG 392
Score = 40 (19.1 bits), Expect = 7.3e-133, Sum P(3) = 7.3e-133
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 1361 WQNQSSQGSHAMSAGSLTSSGDAAQASAYGLAGGQGNQGYSSS 1403
W Q QG + S+GS + Q + G+ G SSS
Sbjct: 355 WPGQG-QGGGSNSSGSSQTQITPQQQNPGSSNNNDGSDGNSSS 396
Score = 40 (19.1 bits), Expect = 2.1e-46, Sum P(4) = 2.1e-46
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1009 PNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKD 1041
PNLK+++ D K L + +I P + KD
Sbjct: 2266 PNLKVDMLSDSSNAPKVLSSYIMNIQPANFKKD 2298
Score = 39 (18.8 bits), Expect = 2.7e-46, Sum P(4) = 2.7e-46
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 1091 SGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQ 1126
+G PT ++ L + GTL++D ++ G+S Q
Sbjct: 2071 AGNPTTKINLLNKVLGIVLGTLIKDHEMR--GVSFQ 2104
Score = 38 (18.4 bits), Expect = 2.8e-246, Sum P(4) = 2.8e-246
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 188 NTNWIRVVENLDYEGFYIPTEE 209
+T+WI ++ + YE F EE
Sbjct: 287 DTSWINLILEIGYE-FTSSVEE 307
Score = 38 (18.4 bits), Expect = 7.9e-13, Sum P(5) = 7.9e-13
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 2030 NMRLPDPSTPNLKIDLLPE 2048
N ++P+ P + LLPE
Sbjct: 703 NAKVPEDQLPPKQAQLLPE 721
Score = 37 (18.1 bits), Expect = 1.7e-127, Sum P(5) = 1.7e-127
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 2247 IRCAPE-IEKLFESVARSCGGLKPVDDSMVSGWVPDNT 2283
+ AP + ++ ARS G + + D ++ +VP T
Sbjct: 1670 VGAAPATLYAVYSEFARSIPGFQQMSDRDIALFVPKPT 1707
>WB|WBGene00002845 [details] [associations]
symbol:let-711 species:6239 "Caenorhabditis elegans"
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0010467 "gene
expression" evidence=IMP] [GO:0040001 "establishment of mitotic
spindle localization" evidence=IMP] [GO:0030953 "astral microtubule
organization" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=IMP] GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0010467
GO:GO:0002119 GO:GO:0017148 GO:GO:0018996 GO:GO:0040011
GO:GO:0000003 GO:GO:0000956 GO:GO:0030953 EMBL:FO081266
GO:GO:0040001 eggNOG:COG5103 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054
GeneTree:ENSGT00390000014869 STRING:Q20937 PaxDb:Q20937
EnsemblMetazoa:F57B9.2 KEGG:cel:CELE_F57B9.2 UCSC:F57B9.2
CTD:175971 WormBase:F57B9.2 HOGENOM:HOG000020862 InParanoid:Q20937
OMA:HMDHEVR NextBio:890552 Uniprot:Q20937
Length = 2641
Score = 1052 (375.4 bits), Expect = 2.4e-194, Sum P(4) = 2.4e-194
Identities = 254/694 (36%), Positives = 375/694 (54%)
Query: 1592 KELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQ 1651
+ +T+ ++ + K+N + L + LL ++ H+A +D G N A FA ++
Sbjct: 1937 RRITTAIMQIRSDYKWNMEGIEILFKQNLLQSVLWDQHLAGSMDNGGNMEAVLFAQKFVR 1996
Query: 1652 TLVT-DESRV-VISELHNLV-DALAKLAAKPGSPESLQQLIEIVRNPXXXXXXXXXXXXX 1708
++ D SR+ + E L + L KL + + + + N
Sbjct: 1997 SIGGGDMSRIQFLKERFPLTCEQLTKLHQLQSATRT--EGMNNAMNNGAGNAAHHHAGLQ 2054
Query: 1709 KDDKARQSKDKKAYSHTTANREDYNIPESVDPDPVGFPEQVSMLFAEWYQICELP-G--S 1765
+ + +A D D + +V ++ EW +C P G S
Sbjct: 2055 QQPPVALPMEAAPMPQASA---DAMAQRGYDDQEM--TAKVEIIMREWIGLCYSPTGQRS 2109
Query: 1766 NDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTE--VSVA-HCLSSEVINPGTXXXXXXXX 1822
+ + + +H++G+L DD +FFR E V ++ + SE + G
Sbjct: 2110 PQESLAQMIQLMHEHGVLATDDKITQFFRLCVENCVDISVRVMKSEQLANGLPTTLIRHR 2169
Query: 1823 XXXFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPY 1882
+ +D + KLM +++ Q +KI LL K+L + V + D E +K FN PY
Sbjct: 2170 C--YYTLDAFVKLMALMIRHSDNGQSQNKINLLKKLLNIIVGVLHMDHEVRKQDFNAMPY 2227
Query: 1883 FRLFINWLLDMSSLDPVA--DGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFM 1940
R+ I+ +++ DP+ + + IL AF F LQP ++P F+FAWL++V HR+ +
Sbjct: 2228 HRILISLFNEITGPDPLKLLEPIAWSILEAFGQTFFALQPRRMPGFAFAWLDIVGHRNVI 2287
Query: 1941 PKLLIGNG--------QKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLV 1992
+LL G + Y Q L+++ L+FL PFLRN +L + LYKGTLRVLLV
Sbjct: 2288 GRLLANTGIAETVDAVKTAATYTQ-LIISHLKFLAPFLRNIQLPKSIAILYKGTLRVLLV 2346
Query: 1993 LLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLK-IDLLPEIRD 2051
+LHDFPE LC++H+ CD IPP+C+Q+RN+ILSA+PR MRLPDP N K +D +PE+
Sbjct: 2347 ILHDFPELLCEFHYVICDTIPPNCVQLRNLILSAYPRQMRLPDPFALNFKQVDTIPEMAV 2406
Query: 2052 PPRIFSEVD-AALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVP 2110
P+ S ++ A + +R +D+YL + FL L LL ++A GT+YN
Sbjct: 2407 EPK--SNLNMATIIPDNIRIPLDEYL-ANRISVDFLPNLPT-LLQTQNQA---GTKYNTT 2459
Query: 2111 LINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLF 2170
++N+LVLYVG++AI L R + N + T+++ DIFQ L LDTEGRYL
Sbjct: 2460 VMNALVLYVGIRAIEHLHLRRQRISTL--NIAHTSYM-----DIFQNLAIQLDTEGRYLL 2512
Query: 2171 LNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITF 2230
N ANQLRYPN HTHYFS V LYL+ + + IQEQITR+LFERL+ RPHPWGLLITF
Sbjct: 2513 FNGIANQLRYPNAHTHYFSCVFLYLFKNSTNDTIQEQITRILFERLVALRPHPWGLLITF 2572
Query: 2231 IELIKNPRYNFWNQSFIRCAPEIEKLFESVARSC 2264
IELIKNP YNFW F CAPEI++LF++VA +C
Sbjct: 2573 IELIKNPTYNFWRYEFTSCAPEIQRLFQNVANTC 2606
Score = 678 (243.7 bits), Expect = 2.4e-194, Sum P(4) = 2.4e-194
Identities = 196/633 (30%), Positives = 318/633 (50%)
Query: 768 PLGDTS--SAQKLHNAVSAPAMLSISSGFAR--PSRGVTSTKFGSAL---NIETLVAAAE 820
P+G SA +AP + A P + + + G+ L N++TLV A
Sbjct: 1203 PVGSAQAGSASSTPTPAAAPTNWGAVARAASVDPKNSLPANRTGNVLSYTNVDTLVMATN 1262
Query: 821 RRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQ---YYPWFAQYMVMKRA 877
+ I PA + DKISF+ NN+S N+ K E E++ + + W AQY+VMKR
Sbjct: 1263 KDGAEIAQPAEAIVDKISFLFNNLSQSNLIQKKDEVVEMISDHGDAFTLWLAQYIVMKRV 1322
Query: 878 SIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSE---LIKSSSEERSLLKNLG 934
SIE NF LY +F++ + + L++ I + T+ N ++LL ++ + S+ +R LLKNLG
Sbjct: 1323 SIEQNFQPLYNQFVNAIENPYLDQCIKRETFRNIRILLRTDKRTTVASNYSDRQLLKNLG 1382
Query: 935 SWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAYQPPN 992
SWLG +TI RN+ + ++D KSL++EAY KG ++ V+PF SKIL C + + P
Sbjct: 1383 SWLGAITIARNKPILLNDLDLKSLLLEAYYKGQAELLYVVPFISKILTACSKTSLFTPTC 1442
Query: 993 PWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDF 1052
W +IL +LAE+++ P+LK+NLKF+IEVL K L VD+ + +LKD ++ +
Sbjct: 1443 AWIRSILKVLAELHNEPDLKINLKFEIEVLCKELNVDLNQLQMDGILKDTEKLVRVPQQL 1502
Query: 1053 SNKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASP--PNSGGPTHLLSQYAAPLRLSSG 1110
+ + ++P+ V+ I G + L SP P+ P + L SG
Sbjct: 1503 CDVKL-LTRPEAASPVQSKIHMS-GSAE-QLSGMSPAIPDQVKPA---TPQPTEAELQSG 1556
Query: 1111 TLMEDEKLAALGISDQLPSAQGLFQASQ-SQSPFSVSQLSTPIPNIGTHVIINQKLTALG 1169
T G Q AQ + + + +V IP HV I L
Sbjct: 1557 TG---------GGGSQGAEAQVVPNVTHFAYHDINVLTYDGLIP----HVKIVSHLPLFQ 1603
Query: 1170 LHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAA-HL 1228
LH H + +V AM AIKE++ + +R++ IA T+ LV KD+A++ +E + A+ H+
Sbjct: 1604 LHPHAKHLVRPAMIHAIKELIGPVTERALKIAMTVTESLVRKDFALDPEEQNLRAASFHM 1663
Query: 1229 MVASLAGSLAHVTCKEPLRGSISSQLRNSLQGL---TIAS----ELLEQAVQLVTNDNLD 1281
M A AG +A +TC++PL S+ S L N+ T A+ +++E A +T DN++
Sbjct: 1664 MRAMTAG-MAMITCRDPLASSMHSNLANAFSSSLRSTAANPEMKQMIEDAAATITQDNVE 1722
Query: 1282 LGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPK 1341
L I + A +KA Q I+ + + +++ SF+ I A +P+A+
Sbjct: 1723 LSTNFIVKTACEKATQDIEKRL--EADYQKRIAAKAEMSFYRDEIAAAIHAQLPKAIATV 1780
Query: 1342 PGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSA 1374
PG + +Y+ F +++ G +SA
Sbjct: 1781 PGPTDKALMGIYDQFSSRICGFKANSGEDPVSA 1813
Score = 277 (102.6 bits), Expect = 2.4e-194, Sum P(4) = 2.4e-194
Identities = 49/135 (36%), Positives = 90/135 (66%)
Query: 528 YADDIEAEANSYFHQMFS--GQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRF 585
+A+DI+ EANSYF +++S +++E ++ +L RF+ S+ +RE + C++ NLFEEYRF
Sbjct: 1036 FAEDIQEEANSYFEKIYSVNNAMSVENLIDLLKRFRVSNDRRERLVLACVVKNLFEEYRF 1095
Query: 586 FPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQF 645
F +YPER+LR A ++G II+ +++++ A+R V+++L ++ ++ FG AL+
Sbjct: 1096 FHEYPERELRTTAAVYGGIIREDIISNVQFATAVRKVIESLSADPNTMLWTFGIVALQHC 1155
Query: 646 VDRLIEWPQYCNHIL 660
+L +P+ C I+
Sbjct: 1156 RSKLCAYPKVCQMIV 1170
Score = 95 (38.5 bits), Expect = 2.4e-194, Sum P(4) = 2.4e-194
Identities = 48/280 (17%), Positives = 109/280 (38%)
Query: 187 PNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQ-EPFPLHAVCGSVWKNTEGQLSF 245
P+ NW+ V++ D E F I + F ++ Q + FP+ + W+ + QL
Sbjct: 439 PDINWVEVIKEFDSEEFAI-CRQTIIMFADIFPIMFQPQNFPVSFFL-TPWRYYDHQLRL 496
Query: 246 LRYAV--ASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWXXXXXXX--XXXXXSEM 301
+ + A + + H+ P ++ + + S W S+
Sbjct: 497 FEFMIEYADVWNISQYPHTKVLTPDLN-LKTIPDDSTSVVQLWNCQEFSNCLLTIANSQP 555
Query: 302 GHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFP-MIIKSTMSNGMILH 360
+ + Q ++ +L + T + + ++ P I+KS ++
Sbjct: 556 SLYNAIKQFYNVGSMQAGDVSMLALILSPTQWTTGRQDLIRHFLPSFILKSPNVTPVLNL 615
Query: 361 IW-------HVNPNIVLRGFVDAQNMEPDCTIRILEICQELKI--LSSVLEMIPS--PFA 409
+W H+ +++ + +IL++ ++K LS +L P F
Sbjct: 616 VWNDTSLSKHMRQHVIYC-LTSMHAADSSQLAKILDVAHDIKPTGLSELLNQAPKHLAFM 674
Query: 410 IRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKE 449
+ LA +AS+++ ++LEKW+ + + L+F+++
Sbjct: 675 VDLACLASKRDYLNLEKWIEDKEKAHGEAMTVAVLQFIQK 714
Score = 49 (22.3 bits), Expect = 1.7e-102, Sum P(5) = 1.7e-102
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 847 LNVEAKAKEFTEILKEQYYPWFAQ-YMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQ 905
+N + ++ F E ++E+ +F + Y V S+E N DL +F +V++ R ++
Sbjct: 1027 MNEDFQSMTFAEDIQEEANSYFEKIYSVNNAMSVE-NLIDLLKRF--RVSNDRRERLVLA 1083
Query: 906 ATYEN 910
+N
Sbjct: 1084 CVVKN 1088
Score = 43 (20.2 bits), Expect = 1.4e-127, Sum P(4) = 1.4e-127
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 1119 AALGISDQLPSAQGLFQASQSQSPFSVSQLSTPIPNIGT 1157
A +GI DQ S F+A+ + P S S I + T
Sbjct: 1787 ALMGIYDQFSSRICGFKANSGEDPVSAEPGSGAITPVQT 1825
Score = 42 (19.8 bits), Expect = 2.2e-102, Sum P(5) = 2.2e-102
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 1586 VCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLID 1635
V K + +E + Y + E + + G+IR ++++ ++ + K+I+
Sbjct: 1085 VVKNLFEEYRFFHEYPERELRTTAAVYGGIIREDIISNVQFATAVRKVIE 1134
Score = 41 (19.5 bits), Expect = 3.3e-98, Sum P(3) = 3.3e-98
Identities = 46/179 (25%), Positives = 70/179 (39%)
Query: 1239 HVT-CKEPLRGSISSQLRNSLQGL-----TIASELLEQAVQLVTNDNLDLGCAV------ 1286
HV C + + SSQL L T SELL QA + + +DL C
Sbjct: 629 HVIYCLTSMHAADSSQLAKILDVAHDIKPTGLSELLNQAPKHLAF-MVDLACLASKRDYL 687
Query: 1287 -IEQAATDKAIQTIDGE---IAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVP-EALRPK 1341
+E+ DK + GE +A +++K++ + P A + G P E L+
Sbjct: 688 NLEKWIEDK--EKAHGEAMTVAVLQFIQKKYQHAQLVAAIAPKTQAT-TPGAPSEPLQVL 744
Query: 1342 PGHLSVSQQRVYEDFVRLPWQ---NQSSQGSHAMSAGSLT-SSGDAAQASAYGLAGGQG 1396
+S ++ L +Q S + S S G + SSG Q +G GG G
Sbjct: 745 IPFVSKRARKPLRQQFPLVFQVMKENSGRSSSVSSGGHVQQSSGSQPQQQQFG--GGSG 801
Score = 38 (18.4 bits), Expect = 3.4e-169, Sum P(4) = 3.4e-169
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 768 PLGDTSSAQKLHNAVSAPAMLSISSGFA 795
P T+S Q++H S P + + FA
Sbjct: 830 PTPPTTSQQQIHVQQSVPGPIQRPAQFA 857
Score = 38 (18.4 bits), Expect = 3.0e-101, Sum P(5) = 3.0e-101
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 1340 PKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSA 1374
P P +S S Q + L + S+ G HA A
Sbjct: 916 PPPSSMSPSTQMMRSLIPPLTQRQNSNSGWHAAPA 950
>ASPGD|ASPL0000078074 [details] [associations]
symbol:AN4965 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] EMBL:BN001303 EMBL:AACD01000084
eggNOG:COG5103 KO:K12604 InterPro:IPR007196 InterPro:IPR024557
Pfam:PF12842 Pfam:PF04054 OrthoDB:EOG4SFDF0 OMA:VIQEQIN
RefSeq:XP_662569.1 ProteinModelPortal:Q5B3B5 STRING:Q5B3B5
EnsemblFungi:CADANIAT00005431 GeneID:2872761 KEGG:ani:AN4965.2
HOGENOM:HOG000196837 Uniprot:Q5B3B5
Length = 2317
Score = 765 (274.4 bits), Expect = 1.1e-188, Sum P(5) = 1.1e-188
Identities = 191/541 (35%), Positives = 292/541 (53%)
Query: 1731 DYNIPESVDP---DPVGFP-EQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGD 1786
D IPE V+P D +Q+ +F EW I + PG+ D ++ +HQ ++
Sbjct: 1796 DSGIPEVVNPLLSDKARSKRDQMEYIFTEWIGIYKAPGAVDRTYYAFLKDMHQRQVMANQ 1855
Query: 1787 DMTDRFFRRLTEVSVAHCLSSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILK----- 1841
+ + FFR ++SVA E NP FL ID AKL++ ++K
Sbjct: 1856 EDSALFFRLSIDISVAR-FEHESQNPS------GSLDEAFLYIDALAKLVVLLVKFQGEG 1908
Query: 1842 CCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVAD 1901
PV+ S F + IL+V + + + +FN R +FRLF + L + S
Sbjct: 1909 TGPVKTSKSAYF--NSILSVLLLVLNHHQVMRGEAFNQRVFFRLFSSILCEYSMSGLQHS 1966
Query: 1902 GSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGW-PYIQRLLV 1960
+ +++ AN LQP P+F + W LVSHR FM +L + GW PY + + V
Sbjct: 1967 DQHQEMMFTLANKLLSLQPKYYPSFVYGWFSLVSHRFFMSSMLNMPDRAGWGPYCEIMQV 2026
Query: 1961 NLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMR 2020
L ++ L++ + + LY+G LR+LL+L HDFPEF+ + HF FC+VIP C Q+R
Sbjct: 2027 QL-SYIGEQLKSTTMTLVTMDLYRGMLRILLILHHDFPEFVAENHFQFCNVIPAHCAQLR 2085
Query: 2021 NIILSAFPRNM-RLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTG 2079
N++LSA+P + +LPDP LK++ L E+R+ PRI + L ++ +D+ L++
Sbjct: 2086 NLVLSAYPSSFQKLPDPFREGLKVERLEEMREAPRIAGDTAGPLLRAGIKNVIDNALQSN 2145
Query: 2080 QPGSSFLSELKQKLLLPPSEAAS---AGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQS 2136
S + +++ + S+ + A N+ L+N+L LYVG A+ S +S
Sbjct: 2146 NVSDSVIQQIRDAVYDTESKESGLFHAPININLLLVNALALYVGQGAV-------SVNES 2198
Query: 2137 TGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYL- 2195
GN + AF SA + + L + L E RY L+A ANQLRYPN+HT++FSF +L L
Sbjct: 2199 KGNTRA--AFESSAHSALLEKLAKILRPEARYYLLSAMANQLRYPNSHTYFFSFAILRLF 2256
Query: 2196 ---YAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPE 2252
Y E ++ I++QI RVL ERLIV+RPHPWGL+IT EL++N Y F++ FI+ APE
Sbjct: 2257 GTDYTEQDESDIRQQIIRVLLERLIVHRPHPWGLIITLQELLQNSSYAFFHLPFIQAAPE 2316
Query: 2253 I 2253
+
Sbjct: 2317 L 2317
Score = 539 (194.8 bits), Expect = 1.1e-188, Sum P(5) = 1.1e-188
Identities = 102/226 (45%), Positives = 150/226 (66%)
Query: 829 PASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYL 888
P EVQDKI F++NN+S N++ K ++ T++LK+ ++ WFA Y+V +RA ++PNF LYL
Sbjct: 1059 PDEEVQDKILFVLNNVSEQNIDEKLRDLTDVLKDPHHQWFASYLVEERAKLQPNFQQLYL 1118
Query: 889 KFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVL 948
LD+++ K L E+++ TY + LL SE SS ER LKNLGSWLG LTI +++ +
Sbjct: 1119 DLLDRIDDKILWVEVLRETYASTSKLLNSEATLGSSTERGHLKNLGSWLGSLTIAKDKPI 1178
Query: 949 RAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSM 1008
+ + I K L++EAY+ + VIPFT K+L S ++PPNPW M I+ LL E+Y
Sbjct: 1179 KHKHIWFKGLLLEAYDSQRLTIVIPFTCKVLVQATKSTVFKPPNPWLMDIIALLMELYHF 1238
Query: 1009 PNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSN 1054
LK+NLKF+IEVL K+L +D K I P+ +++DR IE + +N
Sbjct: 1239 AELKLNLKFEIEVLCKDLEIDHKAIEPSVIIRDRSTTIEESLSTAN 1284
Score = 365 (133.5 bits), Expect = 1.1e-188, Sum P(5) = 1.1e-188
Identities = 94/272 (34%), Positives = 155/272 (56%)
Query: 1115 DEKLAALGISDQLPSAQGLFQASQSQS----PFSVSQLSTPIPNIGTHVIINQKLTALGL 1170
+E L+ I + L + + + S SQS S + + + +P++ +++ +++
Sbjct: 1277 EESLSTANIPEGLEAFEDMALTSISQSIRNERLSPAAILSTLPSLDKILVLPPSASSMVD 1336
Query: 1171 HLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMV 1230
+++V A++RAI EI++ +V+RSV+IA+ +T +LV KD+AME DE + +AA MV
Sbjct: 1337 SNVLRQIVHSAVERAIAEIITPVVERSVTIASISTVQLVSKDFAMELDEEKFRHAAANMV 1396
Query: 1231 ASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQA 1290
LAGSLA VTCKEPL+ S+++ +R Q + + E + + NDNLD C ++E+A
Sbjct: 1397 RQLAGSLALVTCKEPLKVSMTNYIRMIQQEYS-DQPMPEGLILMCVNDNLDAACGIVEKA 1455
Query: 1291 ATDKAIQTIDGEIAQQLSLRRKHREGVGSS-FFDPNIYAQGSMGVPEALRPKPGHLSVSQ 1349
A +K++ I+ I QL RR+HR S F DP++ G + +PE R PG L+ Q
Sbjct: 1456 AEEKSLPEIEKVIESQLEARRRHRAARPSEPFIDPSMTRWG-LFIPEPYRQTPGGLNKEQ 1514
Query: 1350 QRVYEDFVRLPWQNQSSQGSHAMSAGSLTSSG 1381
+YE+F R Q + +HA + T SG
Sbjct: 1515 LAIYEEFAR---QARGPGTTHAQNVS--TDSG 1541
Score = 300 (110.7 bits), Expect = 1.1e-188, Sum P(5) = 1.1e-188
Identities = 114/502 (22%), Positives = 220/502 (43%)
Query: 190 NWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQEP-FPLHAVCGSVWKNTEGQLSFLRY 248
NW + + D EG + + + ++ A ++ + + G W++ + Q+SFL
Sbjct: 504 NWSLIFRHFDREGLRLDARQFAKLYAALSPIAAEDSTLDVQQLWGGEWEHRDTQMSFLTA 563
Query: 249 AVASPPEVFTFAHSARQLP---YVDAVPGLKLQSGQAN----HAWXXXXXXXXXXXXSEM 301
+ S + + P + D ++LQ +A + S+
Sbjct: 564 FINSRTDASQIPNLRATFPHDFFSDGPEPVRLQGERAAKSPLRSLDATRAIFDLALYSQA 623
Query: 302 GHASFARSMLEYPLKQ--CPEMLLLGMAHINTAYNLIQYEV---SFAVFPMIIKSTMSNG 356
A+ ML + Q P L +A + + +Q + AVF I+K
Sbjct: 624 AWAAAESQMLIKAVVQYDLPVFLCSALA-LPQPWTSVQQSFLLRTLAVF--IMKQEEGYQ 680
Query: 357 MILH-IWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVI 415
+ LH W + V +P T I E E L +L + A+ LA
Sbjct: 681 LALHGAWRQDKQWVADQLFAMFTQDPTSTAAIYEHAIEYNWLEYLLGYT-NGLAMDLACY 739
Query: 416 ASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHH-SGALLNLYM 474
A +K +LE+W+ N ++ K + L K ++ + Q + +++L +
Sbjct: 740 AHRKGPFELEQWVR-NAAS-KGLMDMGTL-LSKYLRIKADDELRVQRREQLAPQMVSLSV 796
Query: 475 EKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQN-GEA----ADSSTSEGYA 529
+ + +L +L+ ++G + + Q + + + PRL N GE D++ G A
Sbjct: 797 KTVFTLLSVLEEYVGD------PQNLTPVQRICIQTYPRLINYGEGFDDIIDANGESGNA 850
Query: 530 --DDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFP 587
+ ++ + F +M+ +L++ +++++ ++K S E +F CM+ L +EY +
Sbjct: 851 LPEPVDKKMQELFGKMYHEELSLREILELMRQYKSSRDPAEQDLFACMVHGLIDEYHCYH 910
Query: 588 KYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRK-PADSKMFVFGTKALEQFV 646
+YP L AV+FG II +LV +TL + L +L+A+R+ M+ FG +A+EQ +
Sbjct: 911 EYPLEALTKTAVMFGGIINFRLVDGITLKVGLGMILEAVREHDIHDPMYKFGVEAIEQLI 970
Query: 647 DRLIEWPQYCNHILQISHLRST 668
+RL EW +C+ +LQI L+ +
Sbjct: 971 NRLPEWVGFCHLLLQIPSLQGS 992
Score = 140 (54.3 bits), Expect = 1.1e-188, Sum P(5) = 1.1e-188
Identities = 61/257 (23%), Positives = 113/257 (43%)
Query: 1495 SSILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQ------GVISEVPEIILRCISR 1548
SS L L+T++ D+ + L N A E V+ V+ E + + ++
Sbjct: 1589 SSQLNGFLETQNPRDRVESLVSDLQQAARN-ATEEHVKDLGRDSAVLQEYNQALRSIVAS 1647
Query: 1549 ---DEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTSWVIYS--DE 1603
+E A A K LY + L + +LA + D+ LV + +W + + D+
Sbjct: 1648 PNGEEVARLTALKACTSLYSQTKSTLEIEVLVHLLAKLCDMSALVARY--TWTVLAEVDD 1705
Query: 1604 ERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLL-QTLVTDESRVVI 1662
E FN +T+ LI + LL++ ++ +++LI +N AA + L+ Q L +E +
Sbjct: 1706 EHMFNVPVTVALIDAGLLDIRRVDMILSRLILQ-KNAAALDVLAELMDQILFNEEPSALR 1764
Query: 1663 SELHNLVDALAKLAAKPGSPESLQQLIEIVRNPXXXXXXXXXXXXXKDDKARQSKDKKAY 1722
S+ ++A++K A+ +++I+ +R+ DKAR +D+ Y
Sbjct: 1765 SDFSGSLEAMSKWLAEDSGLARAKEIIKKLRDSGIPEVVNPLLS----DKARSKRDQMEY 1820
Query: 1723 SHTTANREDYNIPESVD 1739
T Y P +VD
Sbjct: 1821 IFTEWIGI-YKAPGAVD 1836
Score = 76 (31.8 bits), Expect = 1.2e-81, Sum P(4) = 1.2e-81
Identities = 35/100 (35%), Positives = 46/100 (46%)
Query: 1333 GVPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQG--SHAMSAGSLTSSGDAAQASAYG 1390
GVP PG + S Q + LP Q+ SS +H S+GS +S + A G
Sbjct: 99 GVPSPAST-PGPFA-SYQSGSQQPQSLPSQSLSSPKIRAHTPSSGSHLASAAGSVAGGGG 156
Query: 1391 LAGGQGNQGYSSSAGSTGFDAVSRPSDVASGTTESTSAGF 1430
GG G G SS G+T F S + SGTT ++ GF
Sbjct: 157 SGGGGGGTG--SSRGAT-F------SPLLSGTTVNSPTGF 187
Score = 65 (27.9 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 42/182 (23%), Positives = 76/182 (41%)
Query: 1362 QNQSSQGSHAMSAGS-LTSSGDAAQASAYGLAGGQGNQGYSSSAGS-TGFDAVSR-PSDV 1418
Q QS+ +S S LTSS A +S+ G G+G +S+ G + + S+ P +
Sbjct: 64 QPQSNSPGPGVSTSSPLTSSFSAVLSSSRGHPLGRGVPSPASTPGPFASYQSGSQQPQSL 123
Query: 1419 ASGTTESTSA-GFLSTSLVHIGAADGGILHNSES--------ESVNAAFTPAATELYAAD 1469
S + S +S H+ +A G + S S A F+P +
Sbjct: 124 PSQSLSSPKIRAHTPSSGSHLASAAGSVAGGGGSGGGGGGTGSSRGATFSPLLSGTTVNS 183
Query: 1470 STE-PVKEPGA-SSQSLPSTAAPERIGSS-ILEPSLQTRDALDKYHIVAQKLDALIGNDA 1526
T P +PG+ ++ S+ A I +L S+ ++ +K+ A ++ L+ ++
Sbjct: 184 PTGFPPDKPGSVAAHGSQSSLAKISIAQVFLLLDSITEKEGREKWETKAAQIHKLVESNG 243
Query: 1527 RE 1528
E
Sbjct: 244 ME 245
Score = 55 (24.4 bits), Expect = 5.8e-163, Sum P(5) = 5.8e-163
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 735 SESVVDDRHKVSAASSSDMKPLLSSIGQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGF 794
S+S V R ++ +++ P +S GQP S +P S++ L ++ SA +LS S G
Sbjct: 39 SQSSV--RRGLTPLATNLSNPSVSGRGQPQSNSPGPGVSTSSPLTSSFSA--VLSSSRGH 94
Query: 795 ARPSRGVTS 803
RGV S
Sbjct: 95 PL-GRGVPS 102
Score = 50 (22.7 bits), Expect = 1.0e-78, Sum P(3) = 1.0e-78
Identities = 22/73 (30%), Positives = 30/73 (41%)
Query: 1089 PNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLP-SAQGLFQASQS--QSPFSV 1145
P S P +S ++PL S ++ + LG P S G F + QS Q P S+
Sbjct: 65 PQSNSPGPGVST-SSPLTSSFSAVLSSSRGHPLGRGVPSPASTPGPFASYQSGSQQPQSL 123
Query: 1146 SQLSTPIPNIGTH 1158
S P I H
Sbjct: 124 PSQSLSSPKIRAH 136
Score = 48 (22.0 bits), Expect = 3.1e-146, Sum P(4) = 3.1e-146
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 1187 KEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAA-HLMVASLAGS-LAHVTCKE 1244
++ V +V A T+E V KD +S + YN A +VAS G +A +T +
Sbjct: 1602 RDRVESLVSDLQQAARNATEEHV-KDLGRDSAVLQEYNQALRSIVASPNGEEVARLTALK 1660
Query: 1245 PLRGSISSQLRNSLQ 1259
S+ SQ +++L+
Sbjct: 1661 ACT-SLYSQTKSTLE 1674
Score = 44 (20.5 bits), Expect = 1.3e-70, Sum P(3) = 1.3e-70
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 2084 SFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSL 2143
S L L + L+LPPS ++ + +++S V +AI ++ T T + S
Sbjct: 1316 STLPSLDKILVLPPSASSMVDSNVLRQIVHSAV----ERAIAEIITPVVERSVTIASIS- 1370
Query: 2144 TAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLR 2179
T LVS + +LD E F +AAAN +R
Sbjct: 1371 TVQLVS------KDFAMELDEEK---FRHAAANMVR 1397
Score = 42 (19.8 bits), Expect = 1.3e-161, Sum P(5) = 1.3e-161
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 747 AASSSDMKPLLS--SIGQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGF 794
++ + PLLS ++ P+ P D + H + S+ A +SI+ F
Sbjct: 166 SSRGATFSPLLSGTTVNSPTGFPP--DKPGSVAAHGSQSSLAKISIAQVF 213
Score = 42 (19.8 bits), Expect = 1.5e-110, Sum P(4) = 1.5e-110
Identities = 25/114 (21%), Positives = 52/114 (45%)
Query: 18 EQIQNIIMFLQRSSDLSKHVDSLMQILSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLF 77
E++Q+ I+F+ + +++D ++ L+ + H Q+ + ++ + + + L L
Sbjct: 1061 EEVQDKILFVLNNVS-EQNIDEKLRDLTDVLKDPHHQWFASYLVEERAKLQPNFQQLYL- 1118
Query: 78 HECRDDDFDDIL-AEMEKEM--SMGDVMN-ELGYGCSADASQCKEILSLFTPLT 127
+ D D IL E+ +E S ++N E G S + K + S LT
Sbjct: 1119 -DLLDRIDDKILWVEVLRETYASTSKLLNSEATLGSSTERGHLKNLGSWLGSLT 1171
Score = 41 (19.5 bits), Expect = 1.7e-161, Sum P(5) = 1.7e-161
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 740 DDRHKVSAASSSDMKPLLSSIGQPSSVA 767
D R K A ++ + P L S+ PS +
Sbjct: 341 DLRVKADAILANSITPFLQSLASPSDAS 368
Score = 41 (19.5 bits), Expect = 2.0e-110, Sum P(4) = 2.0e-110
Identities = 28/106 (26%), Positives = 39/106 (36%)
Query: 1031 KDITPTSL-LKDRKREIEGNPDFSNKDVGASQPQ-LVPEVKPAIVSPLGHVDLPLDVASP 1088
+ +TP + L + G P ++ G S L + S GH L V SP
Sbjct: 45 RGLTPLATNLSNPSVSGRGQPQSNSPGPGVSTSSPLTSSFSAVLSSSRGH-PLGRGVPSP 103
Query: 1089 PNSGGP-THLLSQYAAPLRLSSGTLMEDEKLAALGIS-DQLPSAQG 1132
++ GP S P L S +L + A S L SA G
Sbjct: 104 ASTPGPFASYQSGSQQPQSLPSQSLSSPKIRAHTPSSGSHLASAAG 149
Score = 40 (19.1 bits), Expect = 2.3e-68, Sum P(4) = 2.3e-68
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 1234 AGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQ 1270
A +A T LR I + + N+LQ ++ +++Q
Sbjct: 2118 APRIAGDTAGPLLRAGIKNVIDNALQSNNVSDSVIQQ 2154
Score = 39 (18.8 bits), Expect = 2.8e-145, Sum P(4) = 2.8e-145
Identities = 36/209 (17%), Positives = 79/209 (37%)
Query: 1568 SNNLHFSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGL----IRSELLNL 1623
SN L H A+ AI ++ VV+ + S + ++D M L R N+
Sbjct: 1337 SNVLRQIVHSAVERAIAEIITPVVERSVTIASISTVQL-VSKDFAMELDEEKFRHAAANM 1395
Query: 1624 AEYNVHMAKLIDGGRN-KAATEFAISLLQTLVTDESR---VVISELHNLVDALAKLAAKP 1679
L+ K + I ++Q +D+ +++ +++ +DA + K
Sbjct: 1396 VRQLAGSLALVTCKEPLKVSMTNYIRMIQQEYSDQPMPEGLILMCVNDNLDAACGIVEKA 1455
Query: 1680 GSPESLQQLIEIVRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTANREDYNIPESVD 1739
+SL ++ +++ + + R ++ + + + R IPE
Sbjct: 1456 AEEKSLPEIEKVIESQLEARR-----------RHRAARPSEPFIDPSMTRWGLFIPEPYR 1504
Query: 1740 PDPVGFPEQVSMLFAEWYQICELPGSNDA 1768
P G ++ ++ E+ + PG+ A
Sbjct: 1505 QTPGGLNKEQLAIYEEFARQARGPGTTHA 1533
Score = 39 (18.8 bits), Expect = 3.2e-110, Sum P(4) = 3.2e-110
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 510 STPRLQNGEAA-DSSTSEGYADDI 532
ST +L N EA SST G+ ++
Sbjct: 1140 STSKLLNSEATLGSSTERGHLKNL 1163
Score = 38 (18.4 bits), Expect = 1.8e-77, Sum P(3) = 1.8e-77
Identities = 25/80 (31%), Positives = 36/80 (45%)
Query: 1413 SRPSDVASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTE 1472
S S +ASGT +S+S + G S+S SV TP AT L + S
Sbjct: 9 SSQSSIASGTDKSSSTRPTRSQQSPWGPPV------SQS-SVRRGLTPLATNL-SNPSVS 60
Query: 1473 PVKEPGASSQSLP--STAAP 1490
+P ++S P ST++P
Sbjct: 61 GRGQPQSNSPG-PGVSTSSP 79
Score = 37 (18.1 bits), Expect = 4.5e-145, Sum P(4) = 4.5e-145
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 1094 PTHLLSQYAAPLRLSSGTLMEDEKLA 1119
P+ L S ++ L S L ED LA
Sbjct: 1760 PSALRSDFSGSLEAMSKWLAEDSGLA 1785
>GENEDB_PFALCIPARUM|PF11_0049 [details] [associations]
symbol:PF11_0049 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014186 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 RefSeq:XP_001347725.1
ProteinModelPortal:Q8IIW4 IntAct:Q8IIW4 MINT:MINT-1629072
EnsemblProtists:PF11_0049:mRNA GeneID:810602 KEGG:pfa:PF11_0049
EuPathDB:PlasmoDB:PF3D7_1103800 HOGENOM:HOG000282195 Uniprot:Q8IIW4
Length = 3371
Score = 968 (345.8 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 192/437 (43%), Positives = 286/437 (65%)
Query: 1829 IDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFIN 1888
ID AK+++ ++K ++Q S L K++ + + I+ ++ + K++FN RPY+RLF++
Sbjct: 2642 IDALAKMIICMMKLIDIQQ-ISPFVLFQKVMNIFCRIIVYESRKNKSNFNQRPYYRLFLS 2700
Query: 1889 WLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNG 1948
L++++ + + + + AF +L P++VPAF FAWLEL+SH+ F+P++L
Sbjct: 2701 ILIEINKYEKSFEDIYNKFILAFGYYLCILNPIRVPAFVFAWLELISHKLFLPEIL--KS 2758
Query: 1949 QKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTF 2008
KGW +LL+ LL+FL FL+N L ++ LY+GTLR LL+LLHDFPEFLC Y+F+F
Sbjct: 2759 SKGWYIYNKLLIYLLEFLYIFLKNNYLTDSIKILYRGTLRTLLILLHDFPEFLCVYNFSF 2818
Query: 2009 CDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQM 2068
C+VIP +C+Q+RN+ILSAFPRN++LP P PNLKID LPEI+ PP I + L +
Sbjct: 2819 CNVIPLNCVQLRNLILSAFPRNIKLPHPFNPNLKIDELPEIKIPPVILNNFTFILIDYNI 2878
Query: 2069 RADVDDYLKTGQPGSSFLSELKQKLLLPPS-EAASAGTRYNVPLINSLVLYVGMQAIHQL 2127
+ D+++Y + +L ++ +KL++ +A T+YNV LIN++VLY+GM +
Sbjct: 2879 KKDINNYFL--KRNIIYLQKIHKKLIIKNKMKALYLKTKYNVSLINAVVLYIGMSLPSSI 2936
Query: 2128 QTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHY 2187
+ +QS A++I L D EGR+ ++ AN LRYPN+HTHY
Sbjct: 2937 LIFHNSSQS------------HPAIEIILYLTYKFDMEGRHYLFSSIANHLRYPNSHTHY 2984
Query: 2188 FSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFI 2247
FS +LL+++ +N EII EQIT +L ERLIV+RPHPWGLLITFIELI+NP + FW SF+
Sbjct: 2985 FSCLLLWIFKVSNTEIINEQITGILIERLIVHRPHPWGLLITFIELIRNPIFKFWQCSFV 3044
Query: 2248 RCAPEIEKLFESVARSC 2264
PEIE +F+S+A SC
Sbjct: 3045 SVVPEIENMFQSIAHSC 3061
Score = 445 (161.7 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 95/250 (38%), Positives = 152/250 (60%)
Query: 806 FGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYY 865
FG IE L+ A E + I P+S + ++ I N + N++ K K + ++ Y+
Sbjct: 606 FGLG-QIECLMDATELTKNII-LPSSIIIGEVFSIFNTLCLFNIDEKIKILKDFMQPDYF 663
Query: 866 PWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSEL--IKSS 923
W A Y+V RAS E N H+++L+F+DK++ I+ TY+ C ++L + +K
Sbjct: 664 NWLAFYIVKSRASKEVNLHNVFLEFIDKLSYPLFIDTIISMTYD-CILILFKYINELKEV 722
Query: 924 SEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQ 983
S R++LKNLGSWLG +T+GRN+ L+++ +D K ++ EAY+KG ++ ++P KILE +
Sbjct: 723 SAFRTVLKNLGSWLGFITLGRNRPLKSKILDLKVVLFEAYDKGCLVCILPMVCKILESIK 782
Query: 984 SSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDI-TPTSLLKDR 1042
S ++PPNPWT AIL LL EI+ +PN+K + F++EVLFKNL +++++ T LL R
Sbjct: 783 LSKNFKPPNPWTTAILCLLTEIHELPNVKTYIIFEVEVLFKNLSLNIQEFQNKTILLSKR 842
Query: 1043 KREIEGNPDF 1052
DF
Sbjct: 843 MPPQNKKSDF 852
Score = 341 (125.1 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 75/165 (45%), Positives = 111/165 (67%)
Query: 1152 IPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLK 1211
+ ++G VII+ + + +RVVP+A+DRAI+EI++ I++RSVSI TT+E++ K
Sbjct: 1061 LQSLGNAVIISPSIALFQIQPTLKRVVPVAVDRAIREIIASILERSVSICCVTTREIICK 1120
Query: 1212 DYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIAS----EL 1267
D+ +E++E I AAH+MVASLA SLA TCKEPLR S++ LR LQ + L
Sbjct: 1121 DFCLETNEYLIRKAAHIMVASLASSLALATCKEPLRISLTQHLRQLLQPTSTKDCNDQVL 1180
Query: 1268 LEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRK 1312
+EQ VQ++ DNL+LGC +IEQA +KAI+ I+ E + L L ++
Sbjct: 1181 IEQVVQILCADNLELGCNLIEQAVIEKAIKDIN-ESLEPLFLTKE 1224
Score = 276 (102.2 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 60/161 (37%), Positives = 97/161 (60%)
Query: 533 EAEANSYFHQMFSGQLTIEAMVQMLARFKESSV-KREHSIFECMIGNLFEEYRFFPKYPE 591
EAE N+YF ++++G +T+ M+ +L S + + +++CM+ LF E +FFPKYP
Sbjct: 20 EAEVNNYFAKLYTGDITVNTMLDILKGLSSSPKGSKNNDVYKCMLLVLFNECKFFPKYPP 79
Query: 592 RQLRIAAVLFGSIIKHQLVTHL--TLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRL 649
+L I A LFG +IK+ L+ +L IAL +L+A+RK D KMF FG ALEQF + L
Sbjct: 80 EELDITAKLFGKLIKNNLLMDYGNSLNIALMCILEAIRKENDIKMFNFGITALEQFEEYL 139
Query: 650 IEWPQYCNHILQISHLRSTHAELVAFIERALARISSGHLES 690
+ +P + + +L +++LR + + V L+ I H+ S
Sbjct: 140 LCYPSFLSSLLTMNNLRKYNPQYVTHYNDLLS-ILPEHIRS 179
Score = 76 (31.8 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 1606 KFNRDITMGLIRSELLNLAEYNVHMAK-LIDGGRNKA-ATEFAISLLQTLVTDESRVVIS 1663
K+N ++T GLIR L+++ +Y ++ K LI+ N EF I L + ++ D +
Sbjct: 1605 KYNVNVTAGLIRYNLIDIEKYKKYLEKELINNKENFTNLIEFVILLFKNILIDFHIYRYN 1664
Query: 1664 ELHNLVDALAK 1674
+ N+ + K
Sbjct: 1665 DFQNIFSLINK 1675
Score = 53 (23.7 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 1747 EQVSMLFAEWYQICELPGSNDA--ACTRYVLQLHQNGLLKGDDMTDRFF 1793
E +S F +W ++ L ++ + ++ + GLLK D D FF
Sbjct: 2133 EIISFAFNQWVKLTSLNNIDNPNESYMKFFQSISNQGLLKIDSNIDNFF 2181
Score = 49 (22.3 bits), Expect = 1.8e-88, Sum P(6) = 1.8e-88
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 2171 LNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQ 2207
LN A +++ NN T YFS V+ + N+E QE+
Sbjct: 1709 LNVEAQKIK-ENNETVYFSDVMQFCVEYFNKE--QEE 1742
Score = 45 (20.9 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 840 IINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFL 891
++N + V K + + YY F ++ + E +F D+Y KF+
Sbjct: 2670 VMNIFCRIIVYESRKNKSNFNQRPYYRLFLSILI-EINKYEKSFEDIYNKFI 2720
Score = 43 (20.2 bits), Expect = 6.9e-90, Sum P(3) = 6.9e-90
Identities = 25/129 (19%), Positives = 52/129 (40%)
Query: 410 IRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGAL 469
I ++ ++KE +D++K L + +K E + K+ + S + ++SG +
Sbjct: 1907 INESINKNKKEEIDIKKSLDNHSENFKRECSESLINTNKDQPCDIASQESNELINNSG-I 1965
Query: 470 LNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYA 529
+K K L + E+I++ + +D + + E T+E
Sbjct: 1966 KKKNTKKKEKKNKKLNEECKENMDEESKEKIDEEKKEKIDEEKKEKIDEEKKEKTNEEKK 2025
Query: 530 DDIEAEANS 538
D I E N+
Sbjct: 2026 DKINEEKNN 2034
Score = 40 (19.1 bits), Expect = 3.7e-114, Sum P(6) = 3.7e-114
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 1210 LKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLE 1269
+ Y + D N + +V L G L + + L SI++ + N Q + S+ +
Sbjct: 298 MNGYDINHDNINKRNNSINVVNVLDGILNNNINNDNLLSSINNMVPNYQQQVPNFSQHIN 357
Query: 1270 QAVQLVTNDNLDL 1282
+ NDN+ L
Sbjct: 358 NDISSNINDNIIL 370
Score = 40 (19.1 bits), Expect = 5.1e-113, Sum P(3) = 5.1e-113
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 834 QDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDK 893
+ KI F + L V + ++ T +E F Q++ + + N ++ Y+KF
Sbjct: 2106 KSKI-FKDKGVGGLRVVPRPQQVTNEHEEIISFAFNQWVKLTSLNNIDNPNESYMKFFQS 2164
Query: 894 VNSKAL 899
++++ L
Sbjct: 2165 ISNQGL 2170
Score = 39 (18.8 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 1528 EAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYE 1565
+ + +I +PEI ++ E ++ K++ L E
Sbjct: 1452 DGNIFNLIKSIPEIAALTKNKYETIISYTNKIYTFLLE 1489
Score = 39 (18.8 bits), Expect = 3.6e-184, Sum P(6) = 3.6e-184
Identities = 6/18 (33%), Positives = 14/18 (77%)
Query: 1501 SLQTRDALDKYHIVAQKL 1518
++ ++A+DK ++ AQK+
Sbjct: 1699 NVNIKEAIDKLNVEAQKI 1716
Score = 38 (18.4 bits), Expect = 4.6e-162, Sum P(7) = 4.6e-162
Identities = 12/59 (20%), Positives = 26/59 (44%)
Query: 653 PQYCNHILQISHLRSTHAELVAFIERALA-RISSGHLESDGASNPAAH--QHVSSQATS 708
PQY H + + H + +IE ++ +I + + NP + Q ++ + T+
Sbjct: 160 PQYVTHYNDLLSILPEHIRSMPYIEPSIIIKIKQLYSMNTNKVNPTINNMQLINDEHTN 218
Score = 38 (18.4 bits), Expect = 6.0e-114, Sum P(6) = 6.0e-114
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 1152 IPNIGTHVIINQKLTALGLHLHFQ 1175
+PN+ T++I ++ L L+ Q
Sbjct: 807 LPNVKTYIIFEVEVLFKNLSLNIQ 830
>UNIPROTKB|Q8IIW4 [details] [associations]
symbol:PF11_0049 "NOT family protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014186 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 RefSeq:XP_001347725.1
ProteinModelPortal:Q8IIW4 IntAct:Q8IIW4 MINT:MINT-1629072
EnsemblProtists:PF11_0049:mRNA GeneID:810602 KEGG:pfa:PF11_0049
EuPathDB:PlasmoDB:PF3D7_1103800 HOGENOM:HOG000282195 Uniprot:Q8IIW4
Length = 3371
Score = 968 (345.8 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 192/437 (43%), Positives = 286/437 (65%)
Query: 1829 IDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFIN 1888
ID AK+++ ++K ++Q S L K++ + + I+ ++ + K++FN RPY+RLF++
Sbjct: 2642 IDALAKMIICMMKLIDIQQ-ISPFVLFQKVMNIFCRIIVYESRKNKSNFNQRPYYRLFLS 2700
Query: 1889 WLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNG 1948
L++++ + + + + AF +L P++VPAF FAWLEL+SH+ F+P++L
Sbjct: 2701 ILIEINKYEKSFEDIYNKFILAFGYYLCILNPIRVPAFVFAWLELISHKLFLPEIL--KS 2758
Query: 1949 QKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTF 2008
KGW +LL+ LL+FL FL+N L ++ LY+GTLR LL+LLHDFPEFLC Y+F+F
Sbjct: 2759 SKGWYIYNKLLIYLLEFLYIFLKNNYLTDSIKILYRGTLRTLLILLHDFPEFLCVYNFSF 2818
Query: 2009 CDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQM 2068
C+VIP +C+Q+RN+ILSAFPRN++LP P PNLKID LPEI+ PP I + L +
Sbjct: 2819 CNVIPLNCVQLRNLILSAFPRNIKLPHPFNPNLKIDELPEIKIPPVILNNFTFILIDYNI 2878
Query: 2069 RADVDDYLKTGQPGSSFLSELKQKLLLPPS-EAASAGTRYNVPLINSLVLYVGMQAIHQL 2127
+ D+++Y + +L ++ +KL++ +A T+YNV LIN++VLY+GM +
Sbjct: 2879 KKDINNYFL--KRNIIYLQKIHKKLIIKNKMKALYLKTKYNVSLINAVVLYIGMSLPSSI 2936
Query: 2128 QTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHY 2187
+ +QS A++I L D EGR+ ++ AN LRYPN+HTHY
Sbjct: 2937 LIFHNSSQS------------HPAIEIILYLTYKFDMEGRHYLFSSIANHLRYPNSHTHY 2984
Query: 2188 FSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFI 2247
FS +LL+++ +N EII EQIT +L ERLIV+RPHPWGLLITFIELI+NP + FW SF+
Sbjct: 2985 FSCLLLWIFKVSNTEIINEQITGILIERLIVHRPHPWGLLITFIELIRNPIFKFWQCSFV 3044
Query: 2248 RCAPEIEKLFESVARSC 2264
PEIE +F+S+A SC
Sbjct: 3045 SVVPEIENMFQSIAHSC 3061
Score = 445 (161.7 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 95/250 (38%), Positives = 152/250 (60%)
Query: 806 FGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYY 865
FG IE L+ A E + I P+S + ++ I N + N++ K K + ++ Y+
Sbjct: 606 FGLG-QIECLMDATELTKNII-LPSSIIIGEVFSIFNTLCLFNIDEKIKILKDFMQPDYF 663
Query: 866 PWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSEL--IKSS 923
W A Y+V RAS E N H+++L+F+DK++ I+ TY+ C ++L + +K
Sbjct: 664 NWLAFYIVKSRASKEVNLHNVFLEFIDKLSYPLFIDTIISMTYD-CILILFKYINELKEV 722
Query: 924 SEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQ 983
S R++LKNLGSWLG +T+GRN+ L+++ +D K ++ EAY+KG ++ ++P KILE +
Sbjct: 723 SAFRTVLKNLGSWLGFITLGRNRPLKSKILDLKVVLFEAYDKGCLVCILPMVCKILESIK 782
Query: 984 SSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDI-TPTSLLKDR 1042
S ++PPNPWT AIL LL EI+ +PN+K + F++EVLFKNL +++++ T LL R
Sbjct: 783 LSKNFKPPNPWTTAILCLLTEIHELPNVKTYIIFEVEVLFKNLSLNIQEFQNKTILLSKR 842
Query: 1043 KREIEGNPDF 1052
DF
Sbjct: 843 MPPQNKKSDF 852
Score = 341 (125.1 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 75/165 (45%), Positives = 111/165 (67%)
Query: 1152 IPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLK 1211
+ ++G VII+ + + +RVVP+A+DRAI+EI++ I++RSVSI TT+E++ K
Sbjct: 1061 LQSLGNAVIISPSIALFQIQPTLKRVVPVAVDRAIREIIASILERSVSICCVTTREIICK 1120
Query: 1212 DYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIAS----EL 1267
D+ +E++E I AAH+MVASLA SLA TCKEPLR S++ LR LQ + L
Sbjct: 1121 DFCLETNEYLIRKAAHIMVASLASSLALATCKEPLRISLTQHLRQLLQPTSTKDCNDQVL 1180
Query: 1268 LEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRK 1312
+EQ VQ++ DNL+LGC +IEQA +KAI+ I+ E + L L ++
Sbjct: 1181 IEQVVQILCADNLELGCNLIEQAVIEKAIKDIN-ESLEPLFLTKE 1224
Score = 276 (102.2 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 60/161 (37%), Positives = 97/161 (60%)
Query: 533 EAEANSYFHQMFSGQLTIEAMVQMLARFKESSV-KREHSIFECMIGNLFEEYRFFPKYPE 591
EAE N+YF ++++G +T+ M+ +L S + + +++CM+ LF E +FFPKYP
Sbjct: 20 EAEVNNYFAKLYTGDITVNTMLDILKGLSSSPKGSKNNDVYKCMLLVLFNECKFFPKYPP 79
Query: 592 RQLRIAAVLFGSIIKHQLVTHL--TLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRL 649
+L I A LFG +IK+ L+ +L IAL +L+A+RK D KMF FG ALEQF + L
Sbjct: 80 EELDITAKLFGKLIKNNLLMDYGNSLNIALMCILEAIRKENDIKMFNFGITALEQFEEYL 139
Query: 650 IEWPQYCNHILQISHLRSTHAELVAFIERALARISSGHLES 690
+ +P + + +L +++LR + + V L+ I H+ S
Sbjct: 140 LCYPSFLSSLLTMNNLRKYNPQYVTHYNDLLS-ILPEHIRS 179
Score = 76 (31.8 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 1606 KFNRDITMGLIRSELLNLAEYNVHMAK-LIDGGRNKA-ATEFAISLLQTLVTDESRVVIS 1663
K+N ++T GLIR L+++ +Y ++ K LI+ N EF I L + ++ D +
Sbjct: 1605 KYNVNVTAGLIRYNLIDIEKYKKYLEKELINNKENFTNLIEFVILLFKNILIDFHIYRYN 1664
Query: 1664 ELHNLVDALAK 1674
+ N+ + K
Sbjct: 1665 DFQNIFSLINK 1675
Score = 53 (23.7 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 1747 EQVSMLFAEWYQICELPGSNDA--ACTRYVLQLHQNGLLKGDDMTDRFF 1793
E +S F +W ++ L ++ + ++ + GLLK D D FF
Sbjct: 2133 EIISFAFNQWVKLTSLNNIDNPNESYMKFFQSISNQGLLKIDSNIDNFF 2181
Score = 49 (22.3 bits), Expect = 1.8e-88, Sum P(6) = 1.8e-88
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 2171 LNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQ 2207
LN A +++ NN T YFS V+ + N+E QE+
Sbjct: 1709 LNVEAQKIK-ENNETVYFSDVMQFCVEYFNKE--QEE 1742
Score = 45 (20.9 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 840 IINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFL 891
++N + V K + + YY F ++ + E +F D+Y KF+
Sbjct: 2670 VMNIFCRIIVYESRKNKSNFNQRPYYRLFLSILI-EINKYEKSFEDIYNKFI 2720
Score = 43 (20.2 bits), Expect = 6.9e-90, Sum P(3) = 6.9e-90
Identities = 25/129 (19%), Positives = 52/129 (40%)
Query: 410 IRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGAL 469
I ++ ++KE +D++K L + +K E + K+ + S + ++SG +
Sbjct: 1907 INESINKNKKEEIDIKKSLDNHSENFKRECSESLINTNKDQPCDIASQESNELINNSG-I 1965
Query: 470 LNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYA 529
+K K L + E+I++ + +D + + E T+E
Sbjct: 1966 KKKNTKKKEKKNKKLNEECKENMDEESKEKIDEEKKEKIDEEKKEKIDEEKKEKTNEEKK 2025
Query: 530 DDIEAEANS 538
D I E N+
Sbjct: 2026 DKINEEKNN 2034
Score = 40 (19.1 bits), Expect = 3.7e-114, Sum P(6) = 3.7e-114
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 1210 LKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLE 1269
+ Y + D N + +V L G L + + L SI++ + N Q + S+ +
Sbjct: 298 MNGYDINHDNINKRNNSINVVNVLDGILNNNINNDNLLSSINNMVPNYQQQVPNFSQHIN 357
Query: 1270 QAVQLVTNDNLDL 1282
+ NDN+ L
Sbjct: 358 NDISSNINDNIIL 370
Score = 40 (19.1 bits), Expect = 5.1e-113, Sum P(3) = 5.1e-113
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 834 QDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDK 893
+ KI F + L V + ++ T +E F Q++ + + N ++ Y+KF
Sbjct: 2106 KSKI-FKDKGVGGLRVVPRPQQVTNEHEEIISFAFNQWVKLTSLNNIDNPNESYMKFFQS 2164
Query: 894 VNSKAL 899
++++ L
Sbjct: 2165 ISNQGL 2170
Score = 39 (18.8 bits), Expect = 6.4e-187, Sum P(7) = 6.4e-187
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 1528 EAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYE 1565
+ + +I +PEI ++ E ++ K++ L E
Sbjct: 1452 DGNIFNLIKSIPEIAALTKNKYETIISYTNKIYTFLLE 1489
Score = 39 (18.8 bits), Expect = 3.6e-184, Sum P(6) = 3.6e-184
Identities = 6/18 (33%), Positives = 14/18 (77%)
Query: 1501 SLQTRDALDKYHIVAQKL 1518
++ ++A+DK ++ AQK+
Sbjct: 1699 NVNIKEAIDKLNVEAQKI 1716
Score = 38 (18.4 bits), Expect = 4.6e-162, Sum P(7) = 4.6e-162
Identities = 12/59 (20%), Positives = 26/59 (44%)
Query: 653 PQYCNHILQISHLRSTHAELVAFIERALA-RISSGHLESDGASNPAAH--QHVSSQATS 708
PQY H + + H + +IE ++ +I + + NP + Q ++ + T+
Sbjct: 160 PQYVTHYNDLLSILPEHIRSMPYIEPSIIIKIKQLYSMNTNKVNPTINNMQLINDEHTN 218
Score = 38 (18.4 bits), Expect = 6.0e-114, Sum P(6) = 6.0e-114
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 1152 IPNIGTHVIINQKLTALGLHLHFQ 1175
+PN+ T++I ++ L L+ Q
Sbjct: 807 LPNVKTYIIFEVEVLFKNLSLNIQ 830
>POMBASE|SPAC20G8.06 [details] [associations]
symbol:not1 "CCR4-Not complex subunit Not1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006402 "mRNA catabolic process"
evidence=IC] [GO:0030015 "CCR4-NOT core complex" evidence=ISO]
PomBase:SPAC20G8.06 GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0000289 GO:GO:0030015
GO:GO:0006354 eggNOG:COG5103 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 PIR:T38128
RefSeq:NP_593323.1 ProteinModelPortal:P87112 STRING:P87112
EnsemblFungi:SPAC20G8.06.1 GeneID:2542001 KEGG:spo:SPAC20G8.06
OMA:ANIAGTR OrthoDB:EOG4SFDF0 NextBio:20803082 Uniprot:P87112
Length = 2100
Score = 654 (235.3 bits), Expect = 5.2e-148, Sum P(4) = 5.2e-148
Identities = 161/443 (36%), Positives = 241/443 (54%)
Query: 1826 FLAIDIYAKLMLSILKCCPVE-QG--SSKIFLLSKILTVTVKFILKDAEEKKASF-NPRP 1881
+ +D YA L+++++K +G SSK L KI+ + + + + A F + +
Sbjct: 1653 YFNVDAYASLLVNVVKYTEGSTEGTVSSKSVLFRKIIALIIG-VFAELHNSMAEFVHQKT 1711
Query: 1882 YFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMP 1941
+FRLF + L ++ V + I S F +QP PAF+FAWL L+SH +P
Sbjct: 1712 FFRLFSSILSELDDAKDVLESCFVDIYSVILECFLAIQPRSFPAFTFAWLSLISHSYLLP 1771
Query: 1942 KLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFL 2001
K+L+ N K +L++ L+FL+ L++ + LY G LR++LVLLHDFP FL
Sbjct: 1772 KVLLVNNDKINDLFSEILMSFLKFLD--LKDDIDKAQFKLLYNGFLRIILVLLHDFPGFL 1829
Query: 2002 CDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDA 2061
+ + IP C+Q+RN++LSAFP ++ LPDP LK+ LPE+ P I + V A
Sbjct: 1830 ATHCYQLIPYIPLECVQLRNMVLSAFPSDLHLPDPFAQGLKVGRLPEVTRAPLISNSVSA 1889
Query: 2062 ALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGM 2121
+L D++ + +P +E+ KLLL + T+ N N +L +
Sbjct: 1890 SLEKFASALDLEACFSSSKP-----AEVA-KLLLEVYSSQDTPTKLN-EWANYFMLCLIR 1942
Query: 2122 QAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYP 2181
A TR S A+ S + V I T+ + D++ RY L A ANQLRYP
Sbjct: 1943 HA-----TRDSPAKQAPQFQSKSPECV-----IISTMNRSCDSKCRYFLLTAIANQLRYP 1992
Query: 2182 NNHTHYFSFVLLYLYAEAN---QEI-IQEQITRVLFERLIVNRPHPWGLLITFIELIKNP 2237
++HT+Y S LYL+ ++ QE+ I+EQ+T VL ER+I NRPHPWGLLITF EL+KN
Sbjct: 1993 SSHTYYASCCFLYLFKSSSNNPQELLIKEQMTTVLLERIICNRPHPWGLLITFTELLKNE 2052
Query: 2238 RYNFWNQSFIRCAPEIEKLFESV 2260
YNFW +I+ EI +LF+S+
Sbjct: 2053 DYNFWKHPYIKRNDEICRLFDSL 2075
Score = 475 (172.3 bits), Expect = 5.2e-148, Sum P(4) = 5.2e-148
Identities = 175/672 (26%), Positives = 313/672 (46%)
Query: 50 KDHTQFVLNPVLPDELHDATSLRDLDLFHE-CRDDDFDDI-LAEMEKEMSMGDVMNELGY 107
K+ Q +LN + + DLDL E D+D I L ++ K D + E
Sbjct: 181 KNTFQSLLNQLSDPTQQQSIDKNDLDLLREGLFTTDYDRIPLIKVPKF----DAIIE--- 233
Query: 108 GCSADASQCKEILSLFTPL--TEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCSTMS 165
+ + + +LF P+ ++ TL + AI + + T + +A +++
Sbjct: 234 ---KKLANSRPLTALFGPMKASKATLKSMKEAILKKYP-----PGTATETDVAYLINSLV 285
Query: 166 DLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEA----FSFFMSVYKYA 221
+ +W+ ++ KAI N NW ++ D F I + F+ F + YK
Sbjct: 286 AIHDYGAWDTVLMGKAIVSSFENLNWEAMLSMFDNPKFMITGTPSLVLFFTIFTNAYKLR 345
Query: 222 CQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQ 281
Q F L + +W+N QLS + + + SP +F P V +V LK S +
Sbjct: 346 -QTNFTLDFLW-VLWRNPLPQLSIISHIILSPTSMFDI-REFNVNPVV-SVDSLKDYSEE 401
Query: 282 -ANHAWXXXXXXXXXXXXSEM------GHASFARSM-LEY-PLKQCPEMLLLGMAHINTA 332
N+A ++ ++ S+ L + K E+LLLG + A
Sbjct: 402 LVNYAKIYEKSNLNCIELVQILLRLLSEVVTYETSLFLNFLDEKVSAELLLLGTLQLPLA 461
Query: 333 YNLIQYEVSFAVFPMIIKSTMSNGMI-LHIWHVNPNIVLRGFVDAQNMEPDCTI-RILEI 390
+N +Q ++F + + + + I NP + F+ + ++ ++ +++E
Sbjct: 462 WNPVQESLAFQWCSDFFSNFKEHKFVFVRIERTNPQFLF-AFLRSLWLKDSSSVNQVVEF 520
Query: 391 CQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKD-----VFFEECLK 445
E S + + P+ FA+ +A +A+ ++ + + WL + ++D VF E L
Sbjct: 521 IIENDFTSHIGNIQPNRFALEIAALAAARKALSFQDWLDKKMLEFEDADGLNVFLVEVLD 580
Query: 446 FVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQA 505
F+ + ++ S Q +L++ + + V+L L ++ + S ++SE I+ Q
Sbjct: 581 FLMS-RAALQKNESEQK--EESVVLSI--DTVNVLLTTLMDNVSI--SEEVSEHIKDVQI 633
Query: 506 VVLDSTPRLQN-GEAADS-----STSEGYADDIEAEANSYFHQMFSGQLTIEAMVQMLAR 559
+ L PRL + G DS +T+ ++ D+E+E SYF ++ +++I +V L
Sbjct: 634 LCLQVYPRLFSLGHDRDSIVIATNTTNSFSPDVESEVESYFQALYERRISIGKIVLTLQN 693
Query: 560 FKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIAL 619
FK+S R+ +F C+ +LF+EYRFFP YP L + AVLFGS+I+ +L++ + LG+AL
Sbjct: 694 FKKSENPRDLDLFACLQHSLFDEYRFFPDYPLEALALTAVLFGSLIQFELLSFVPLGVAL 753
Query: 620 RGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERA 679
R V AL P DSKMF FG +AL QF ++L ++ YCN IL I L+ ++ I
Sbjct: 754 RYVYQALLMPTDSKMFRFGMQALVQFQEKLPKYINYCNLILGIPSLQLVRPDIYDSIREM 813
Query: 680 LARISSGHLESD 691
+A + +E D
Sbjct: 814 IASNENTEVEKD 825
Score = 445 (161.7 bits), Expect = 5.2e-148, Sum P(4) = 5.2e-148
Identities = 135/487 (27%), Positives = 237/487 (48%)
Query: 825 PIEAPASE------VQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRAS 878
P+ P +E V D I F INN+S LN K K+ + L Y PWF+ Y+V +R S
Sbjct: 853 PLNVPNAEGEIEESVCDNILFAINNLSQLNFNEKLKDVKDNLTPAYLPWFSHYIVTQRVS 912
Query: 879 IEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLG 938
E NF LY KFL+++ S L + + + T + ++ + S E++ LKNLGSWLG
Sbjct: 913 REANFLSLYGKFLEELKSSDLYKIVFRDTLQAILDIMNNNAETLSPSEKTNLKNLGSWLG 972
Query: 939 KLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAI 998
+T+ RN+ + ++ K L++E + G + V+PF K+LE SS+ ++PPNPW M I
Sbjct: 973 SITLLRNKPITTLQVSFKDLLLEGIDSGRIDRVLPFVCKVLEKASSSVIFKPPNPWLMGI 1032
Query: 999 LGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKD---RKREIEGN-P-DFS 1053
L LL E+Y + ++NLKF+IE+L NL V M +I P+ + ++ +K ++E P D
Sbjct: 1033 LKLLVELYQFADFRLNLKFEIELLLNNLNVKMDNIEPSEMYRNHLVQKADLEKELPEDVL 1092
Query: 1054 NKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSG--GPTHLLSQYAAPLRLSSGT 1111
N + ++ + A S + D V P T L+ Q + L + S
Sbjct: 1093 NAEF-PDGTDVITQYIVAASSQITVTDAVAQVFGKPKPAIKNITQLIIQQSV-LEIISAV 1150
Query: 1112 LMEDEKLAALGISDQLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLH 1171
+ +AA+ + L +++ S+ + Q++ + V + L L ++
Sbjct: 1151 VRRSVGIAAI-TTKSLLQKDFAAESNPSRLLLAARQMAKTLAGNLAMVTCREPLQMLMIN 1209
Query: 1172 LHFQRVVPIAMDR---AIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHL 1228
+F+ + ++ A+ + + +V +++ +A+ E V + A+ + I H+
Sbjct: 1210 -NFRTIALQDVENVHAAVAQAIDELVSQNLFVASSVI-ESVASETAIAEIDAEI---EHM 1264
Query: 1229 MVASLAG--SLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTN-DNLDLGCA 1285
+V + + ++ +P G+ + L N L ++SEL Q QL N D L L
Sbjct: 1265 IVERVRHRKTTPNLPFVDPA-GAANLHL-NLPSVLKLSSELTPQQFQLYENFDRLSLSTI 1322
Query: 1286 VIEQAAT 1292
+ + T
Sbjct: 1323 MSNNSFT 1329
Score = 445 (161.7 bits), Expect = 1.9e-125, Sum P(4) = 1.9e-125
Identities = 114/367 (31%), Positives = 184/367 (50%)
Query: 1747 EQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFR-RLTEVSVAHCL 1805
+Q+ ++F W + +ND +V QLH+ G+L ++ +FFR L V VA
Sbjct: 1585 DQIIIVFVSWVHLLRNSATNDETKAAFVYQLHKQGILSEPELCIQFFRCNLEAVLVAFLE 1644
Query: 1806 SSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVE-QG--SSKIFLLSKILTVT 1862
++ V P + +D YA L+++++K +G SSK L KI+ +
Sbjct: 1645 AASVNAPD------------YFNVDAYASLLVNVVKYTEGSTEGTVSSKSVLFRKIIALI 1692
Query: 1863 VKFILKDAEEKKASF-NPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPL 1921
+ + + A F + + +FRLF + L ++ V + I S F +QP
Sbjct: 1693 IG-VFAELHNSMAEFVHQKTFFRLFSSILSELDDAKDVLESCFVDIYSVILECFLAIQPR 1751
Query: 1922 KVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRF 1981
PAF+FAWL L+SH +PK+L+ N K +L++ L+FL+ L++ +
Sbjct: 1752 SFPAFTFAWLSLISHSYLLPKVLLVNNDKINDLFSEILMSFLKFLD--LKDDIDKAQFKL 1809
Query: 1982 LYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNL 2041
LY G LR++LVLLHDFP FL + + IP C+Q+RN++LSAFP ++ LPDP L
Sbjct: 1810 LYNGFLRIILVLLHDFPGFLATHCYQLIPYIPLECVQLRNMVLSAFPSDLHLPDPFAQGL 1869
Query: 2042 KIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAA 2101
K+ LPE+ P I + V A+L D++ + +P +E+ KLLL +
Sbjct: 1870 KVGRLPEVTRAPLISNSVSASLEKFASALDLEACFSSSKP-----AEVA-KLLLEVYSSQ 1923
Query: 2102 SAGTRYN 2108
T+ N
Sbjct: 1924 DTPTKLN 1930
Score = 287 (106.1 bits), Expect = 2.1e-131, Sum P(4) = 2.1e-131
Identities = 73/214 (34%), Positives = 116/214 (54%)
Query: 1175 QRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLA 1234
+ + + + +++ EI+S +V+RSV IA TTK L+ KD+A ES+ +R+ AA M +LA
Sbjct: 1132 KNITQLIIQQSVLEIISAVVRRSVGIAAITTKSLLQKDFAAESNPSRLLLAARQMAKTLA 1191
Query: 1235 GSLAHVTCKEPLRGSISSQLRN-SLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATD 1293
G+LA VTC+EPL+ + + R +LQ + + QA+ + + NL + +VIE A++
Sbjct: 1192 GNLAMVTCREPLQMLMINNFRTIALQDVENVHAAVAQAIDELVSQNLFVASSVIESVASE 1251
Query: 1294 KAIQTIDGEIAQQLSLRRKHREGVGS-SFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRV 1352
AI ID EI + R +HR+ + F DP A + +P L+ L+ Q ++
Sbjct: 1252 TAIAEIDAEIEHMIVERVRHRKTTPNLPFVDPAGAANLHLNLPSVLKLS-SELTPQQFQL 1310
Query: 1353 YEDFVRLPWQNQSSQGSHAMSAGSLTSSGDAAQA 1386
YE+F RL S S G T S D+ A
Sbjct: 1311 YENFDRLSLSTIMSNNSFTSLNGLRTDSADSTDA 1344
Score = 96 (38.9 bits), Expect = 5.2e-148, Sum P(4) = 5.2e-148
Identities = 32/122 (26%), Positives = 63/122 (51%)
Query: 1577 LAILAAIRD-VCKLVVKELTSWVIY---SDEERKFNRDITMGLIRSELLNLAEYNVHMAK 1632
L + +AI + +C+ K + +Y S++ K N I + LIR +L E + H+A+
Sbjct: 1440 LEVFSAILEYICQASTKTAINVSLYWNFSNDLEKLNLPIILSLIRFGILTSGEVDYHVAR 1499
Query: 1633 LIDGGRNKA-ATEFAISLLQTLVTDESRVVI-SELHNLVDALAKLAAK-PG-SPESLQQL 1688
+ + T+FAI LL+T V E+ + + N + +L +++ G + ++ +QL
Sbjct: 1500 GVRSEQGSGPVTDFAIELLRTAVGGENPMALPGNFVNSITSLYEISESFSGETKQAYEQL 1559
Query: 1689 IE 1690
+E
Sbjct: 1560 VE 1561
Score = 43 (20.2 bits), Expect = 1.2e-61, Sum P(3) = 1.2e-61
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 375 DAQNMEPDCTIRILE-ICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEK 426
D +N+ I E + Q L + SSV+E + S AI A I ++ E + +E+
Sbjct: 1218 DVENVHAAVAQAIDELVSQNLFVASSVIESVASETAI--AEIDAEIEHMIVER 1268
Score = 42 (19.8 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 1955 IQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPP 2014
I R+L + + LE + P +L G L+ LLV L+ F +F + F ++
Sbjct: 1002 IDRVLPFVCKVLEKASSSVIFKPPNPWLM-GILK-LLVELYQFADFRLNLKFEIELLLNN 1059
Query: 2015 SCIQMRNIILSAFPRN 2030
++M NI S RN
Sbjct: 1060 LNVKMDNIEPSEMYRN 1075
Score = 37 (18.1 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 856 FTEILK-EQYYPWFAQYM 872
FTE+LK E Y W Y+
Sbjct: 2045 FTELLKNEDYNFWKHPYI 2062
>SGD|S000000689 [details] [associations]
symbol:CDC39 "Component of the CCR4-NOT transcriptional
complex" species:4932 "Saccharomyces cerevisiae" [GO:0000749
"response to pheromone involved in conjugation with cellular
fusion" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IGI;IMP;IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IDA] [GO:0030015 "CCR4-NOT core
complex" evidence=IPI] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IDA;IPI] [GO:0007124 "pseudohyphal growth" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IGI;IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IPI]
[GO:0003674 "molecular_function" evidence=ND] [GO:0051726
"regulation of cell cycle" evidence=IMP] SGD:S000000689
GO:GO:0005634 GO:GO:0005737 EMBL:X59720 EMBL:BK006937 GO:GO:0000122
GO:GO:0051726 GO:GO:0006368 GO:GO:0007124 GO:GO:0032968
GO:GO:0000289 GO:GO:0030015 PDB:4B8C PDBsum:4B8C eggNOG:COG5103
KO:K12604 InterPro:IPR007196 InterPro:IPR024557 Pfam:PF12842
Pfam:PF04054 GeneTree:ENSGT00390000014869 GO:GO:0000749 EMBL:X70151
PIR:S28417 RefSeq:NP_010017.2 PDB:4B89 PDB:4B8A PDB:4B8B
PDBsum:4B89 PDBsum:4B8A PDBsum:4B8B ProteinModelPortal:P25655
DIP:DIP-1202N IntAct:P25655 MINT:MINT-383459 STRING:P25655
PaxDb:P25655 PeptideAtlas:P25655 EnsemblFungi:YCR093W GeneID:850455
KEGG:sce:YCR093W HOGENOM:HOG000057131 OMA:VIQEQIN OrthoDB:EOG43XZBJ
NextBio:966081 Genevestigator:P25655 GermOnline:YCR093W
Uniprot:P25655
Length = 2108
Score = 635 (228.6 bits), Expect = 6.5e-146, Sum P(6) = 6.5e-146
Identities = 164/538 (30%), Positives = 283/538 (52%)
Query: 1747 EQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHCLS 1806
E++ ++F EW ++ + +ND T ++ QL + G++ D F + E+SV+
Sbjct: 1570 EKLYLVFTEWVKLLQRVENNDVITTVFIKQLVEKGVISDTDNLLTFVKSSLELSVSSFKE 1629
Query: 1807 SEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFI 1866
S+ P F+AID L++ +L + + + ++ + I +V V
Sbjct: 1630 SD---P---------TDEVFIAIDALGSLIIKLLILQGFKDDTRRDYI-NAIFSVIVLVF 1676
Query: 1867 LKDAEEKKASFNPRPYFRLFINWLLDMSSLDP-----VADGSNFQIL----SAFANAF-- 1915
KD ++ +FN RPYFRLF N L + +++ ++D S Q L S F N F
Sbjct: 1677 AKDHSQEGTTFNERPYFRLFSNILYEWATIRTHNFVRISDSSTRQELIEFDSVFYNTFSG 1736
Query: 1916 --HVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNA 1973
H LQP P FSFAW+ L+SHR +P +L + GW + L+++L +FL+ +
Sbjct: 1737 YLHALQPFAFPGFSFAWVTLLSHRMLLPIMLRLPNKIGWEKLMLLIIDLFKFLDQYTSKH 1796
Query: 1974 ELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRL 2033
+ V +YKGTLRV+L + +D P FL + H+ + +PP+ Q++N+ILSA P+NM +
Sbjct: 1797 AVSDAVSVVYKGTLRVILGISNDMPSFLIENHYELMNNLPPTYFQLKNVILSAIPKNMTV 1856
Query: 2034 PDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKL 2093
P+P +L ++ +P ++ P +F D + ++ VD+YL+ P +S L + +
Sbjct: 1857 PNPYDVDLNMEDIPACKELPEVF--FDPVIDLHSLKKPVDNYLRI--PSNSLLRTILSAI 1912
Query: 2094 LLPPSEAASAGTRYNV-----PLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLV 2148
+ G Y+ LI ++VL+VG++A + + +S+A +S T
Sbjct: 1913 YKDTYDIKK-GVGYDFLSVDSKLIRAIVLHVGIEAGIEYKRTSSNAVFNTKSSYYTL--- 1968
Query: 2149 SAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYA--EAN-QEI-I 2204
+F LIQ+ E +Y + + QLRYPN HT++FSFVL+ ++ E N Q++ +
Sbjct: 1969 -----LFN-LIQNGSIEMKYQIILSIVEQLRYPNIHTYWFSFVLMNMFKSDEWNDQKLEV 2022
Query: 2205 QEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVAR 2262
QE I R +R+IVN+PH WG+ + F +LI N N + F++ PEI+ + + + +
Sbjct: 2023 QEIILRNFLKRIIVNKPHTWGVSVFFTQLINNNDINLLDLPFVQSVPEIKLILQQLVK 2080
Score = 400 (145.9 bits), Expect = 6.5e-146, Sum P(6) = 6.5e-146
Identities = 86/267 (32%), Positives = 149/267 (55%)
Query: 773 SSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASE 832
S AQ + V A + + +RP + + KF + + + +E AP +
Sbjct: 733 SQAQVYQSIVEAATLANAPKERSRPVQEMIPLKFFAVDEVSCQI----NQEG---AP-KD 784
Query: 833 VQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLD 892
V +K+ F++NN++ N+ K E + L Y+ WF+ Y+V +RA EPN+HDLY K +
Sbjct: 785 VVEKVLFVLNNVTLANLNNKVDELKKSLTPNYFSWFSTYLVTQRAKTEPNYHDLYSKVIV 844
Query: 893 KVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRARE 952
+ S L++ +V T VLL ++ + ++ LKNL SWLG +T+ N+ ++ +
Sbjct: 845 AMGSGLLHQFMVNVTLRQLFVLLSTK--DEQAIDKKHLKNLASWLGCITLALNKPIKHKN 902
Query: 953 IDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLK 1012
I + ++IEAY++ + V+PF +KIL+ S ++PPNPWT+ IL LL E+ N K
Sbjct: 903 IAFREMLIEAYKENRLEIVVPFVTKILQRASESKIFKPPNPWTVGILKLLIELNEKANWK 962
Query: 1013 MNLKFDIEVLFKNLGVDMKDITPTSLL 1039
++L F++EVL K+ + K + P++ +
Sbjct: 963 LSLTFEVEVLLKSFNLTTKSLKPSNFI 989
Score = 266 (98.7 bits), Expect = 6.5e-146, Sum P(6) = 6.5e-146
Identities = 62/187 (33%), Positives = 106/187 (56%)
Query: 1171 HLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMV 1230
H +RV +A+ ++++EI+ +V++S IA TT +++LKD+A E DE+++ AA +MV
Sbjct: 1085 HPDLKRVFQMALAKSVREILLEVVEKSSGIAVVTTTKIILKDFATEVDESKLKTAAIIMV 1144
Query: 1231 ASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQA 1290
LA SLA T EPL+ I S +++ L S + + N+N+ + +IE+A
Sbjct: 1145 RHLAQSLARATSIEPLKEGIRSTMQSLAPNLMSLSSSPAEELDTAINENIGIALVLIEKA 1204
Query: 1291 ATDKAIQTIDGEIAQQLSLRRKHREG-VGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQ 1349
+ DK+ Q + ++ Q +++RR H+E F N S+ +PE L K ++ Q
Sbjct: 1205 SMDKSTQDLADQLMQAIAIRRYHKERRADQPFITQNTNPY-SLSLPEPLGLKNTGVTPQQ 1263
Query: 1350 QRVYEDF 1356
RVYE+F
Sbjct: 1264 FRVYEEF 1270
Score = 264 (98.0 bits), Expect = 6.5e-146, Sum P(6) = 6.5e-146
Identities = 62/191 (32%), Positives = 107/191 (56%)
Query: 499 EIEKFQAV---VLDSTPRLQN-GEAADSSTSE-----GYADDIEAEANSYFHQMFSGQLT 549
++++F+++ +L + PRL N G D + G +DIE E +Y +M+SG+L
Sbjct: 555 QLQRFESLEFSLLIAFPRLINFGFGHDEAILANGDIAGINNDIEKEMQNYLQKMYSGELA 614
Query: 550 IEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQL 609
I+ ++++L R ++S + R+ +F C+ + E FF YP L +VLFGS+I QL
Sbjct: 615 IKDVIELLRRLRDSDLPRDQEVFTCITHAVIAESTFFQDYPLDALATTSVLFGSMILFQL 674
Query: 610 VTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQ-ISHLRST 668
+ L +A R ++ ++P +SKMF F +A+ F RL E+PQYC +L+ + L+S
Sbjct: 675 LRGFVLDVAFRIIMRFAKEPPESKMFKFAVQAIYAFRIRLAEYPQYCKDLLRDVPALKSQ 734
Query: 669 HAELVAFIERA 679
+ +E A
Sbjct: 735 AQVYQSIVEAA 745
Score = 129 (50.5 bits), Expect = 6.5e-146, Sum P(6) = 6.5e-146
Identities = 38/164 (23%), Positives = 82/164 (50%)
Query: 1530 EVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKL 1589
+++ +I ++ I + +D+ AL V+Q V L+ + + L +L + + +
Sbjct: 1395 QIKTIIFQILTFIAKSAQKDQLALKVSQAVVNSLFATSESPLCREVLSLLLEKLCSLSLV 1454
Query: 1590 VVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEY-NVHMAKLIDGGRNKA--ATEFA 1646
K++ W++Y+ + RKFN + L+ L++ E NV L+ +NK +TEFA
Sbjct: 1455 ARKDVVWWLVYALDSRKFNVPVIRSLLEVNLIDATELDNV----LVTAMKNKMENSTEFA 1510
Query: 1647 ISLLQTLVTDESRVVISELHNLVDALAKLAAKPGSPESLQQLIE 1690
+ L+Q V + +++ + + L LA+ E++++ I+
Sbjct: 1511 MKLIQNTVLSDDPILMRM--DFIKTLEHLASS--EDENVKKFIK 1550
Score = 83 (34.3 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 44/159 (27%), Positives = 67/159 (42%)
Query: 2125 HQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEG---RYL-----FLNAAAN 2176
H L ++ A +G L F+V+ L L+ D + ++L +L
Sbjct: 836 HDLYSKVIVAMGSG---LLHQFMVNVTLRQLFVLLSTKDEQAIDKKHLKNLASWLGCITL 892
Query: 2177 QLRYPNNHTHY-FSFVLLYLYAEANQEIIQEQITRVL---FERLIVNRPHPW--GLLITF 2230
L P H + F +L+ Y E EI+ +T++L E I P+PW G+L
Sbjct: 893 ALNKPIKHKNIAFREMLIEAYKENRLEIVVPFVTKILQRASESKIFKPPNPWTVGILKLL 952
Query: 2231 IELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKP 2269
IEL N + N W S E+E L +S + LKP
Sbjct: 953 IEL--NEKAN-WKLSLTF---EVEVLLKSFNLTTKSLKP 985
Score = 60 (26.2 bits), Expect = 6.5e-146, Sum P(6) = 6.5e-146
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 423 DLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQ--DFSAQPFHHSGALLNLYMEKIPVI 480
+ +K I LS + D+F + K + E SQ DF +H+ L N +++ P
Sbjct: 121 EFQKQTGITLSLFIDLFDKSANKDIIESLDRSSQINDFKTIKMNHTNYLRNFFLQTTP-- 178
Query: 481 LKLLKAHIGLITSTKLSEEIEKFQAVVLDS--TPRLQN 516
+ L++++ + + E + A++L +P QN
Sbjct: 179 -ETLESNLRDLLHSLEGESLNDLLALLLSEILSPGSQN 215
Score = 55 (24.4 bits), Expect = 2.2e-145, Sum P(6) = 2.2e-145
Identities = 32/133 (24%), Positives = 58/133 (43%)
Query: 30 SSDLSKHVDSLMQILSLLQSK-DHTQFVLNPVL---PDELHDATSLRDLDLFHECRDDDF 85
+ D+ + +D QI K +HT ++ N L P+ L ++LRDL H +
Sbjct: 142 NKDIIESLDRSSQINDFKTIKMNHTNYLRNFFLQTTPETLE--SNLRDL--LHSLEGESL 197
Query: 86 DDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGL 145
+D+LA + + ++++ D ++ S TP + + IAR+ + L
Sbjct: 198 NDLLA-----LLLSEILSPGSQNLQNDPTR-----SWLTPPMVLDATNRGNVIARSISSL 247
Query: 146 EDNQ-NTFSTFTL 157
+ NQ N F L
Sbjct: 248 QANQINWNRVFNL 260
Score = 54 (24.1 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 885 DLYLKFLDKVNSKALNREIVQATYENC-KVLLG-SELIKSSSEER--SLLKNLGSWLGKL 940
DL+ KFLD+ SK + V Y+ +V+LG S + S E L+ NL +L
Sbjct: 1784 DLF-KFLDQYTSKHAVSDAVSVVYKGTLRVILGISNDMPSFLIENHYELMNNLPPTYFQL 1842
Query: 941 TIGRNQVLRAREIDPKSLII-EAYEKGLMIAVIPFTSKILE 980
+N +L A PK++ + Y+ L + IP ++ E
Sbjct: 1843 ---KNVILSAI---PKNMTVPNPYDVDLNMEDIPACKELPE 1877
Score = 49 (22.3 bits), Expect = 2.6e-109, Sum P(6) = 2.6e-109
Identities = 23/89 (25%), Positives = 49/89 (55%)
Query: 888 LKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERS-------LLKNLGSWLGKL 940
LK L ++N KA N ++ T+E +VLL S + + S + S +++ L LG +
Sbjct: 949 LKLLIELNEKA-NWKL-SLTFE-VEVLLKSFNLTTKSLKPSNFINTPEVIETLSGALGSI 1005
Query: 941 TIGRNQVLRAREIDPKSLIIEAYEKGLMI 969
T+ + Q + R+I ++++ +++ ++I
Sbjct: 1006 TLEQQQTEQQRQI----ILMQQHQQQMLI 1030
Score = 46 (21.3 bits), Expect = 5.9e-123, Sum P(6) = 5.9e-123
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 1128 PSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIK 1187
P +G+ QS +P +S S+P + T IN+ + G+ L + +MD++ +
Sbjct: 1159 PLKEGIRSTMQSLAPNLMSLSSSPAEELDT--AINENI---GIALVL--IEKASMDKSTQ 1211
Query: 1188 EIVSGIVQ 1195
++ ++Q
Sbjct: 1212 DLADQLMQ 1219
Score = 44 (20.5 bits), Expect = 5.8e-86, Sum P(6) = 5.8e-86
Identities = 35/189 (18%), Positives = 76/189 (40%)
Query: 437 DVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILK-LLKAHIGLITSTK 495
DV F ++F KE + F+ Q + + + + P K LL+ L + +
Sbjct: 681 DVAFRIIMRFAKEPPESKMFKFAVQAIY----AFRIRLAEYPQYCKDLLRDVPALKSQAQ 736
Query: 496 LSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYA-DDIEAEANS-------YFHQMFS-G 546
+ + I +A L + P+ ++ + + +A D++ + N +F
Sbjct: 737 VYQSI--VEAATLANAPKERSRPVQEMIPLKFFAVDEVSCQINQEGAPKDVVEKVLFVLN 794
Query: 547 QLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIK 606
+T+ + + K+S S F + + + + P Y + ++ V GS +
Sbjct: 795 NVTLANLNNKVDELKKSLTPNYFSWFSTYL--VTQRAKTEPNYHDLYSKVI-VAMGSGLL 851
Query: 607 HQLVTHLTL 615
HQ + ++TL
Sbjct: 852 HQFMVNVTL 860
Score = 41 (19.5 bits), Expect = 1.2e-85, Sum P(6) = 1.2e-85
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 946 QVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILE 980
Q+ A+ + + +++E EK IAV+ T IL+
Sbjct: 1093 QMALAKSV--REILLEVVEKSSGIAVVTTTKIILK 1125
Score = 41 (19.5 bits), Expect = 7.5e-63, Sum P(3) = 7.5e-63
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 1430 FLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKEPGAS 1480
FL T+ + + +LH+ E ES+N +E+ + S +P S
Sbjct: 173 FLQTTPETLESNLRDLLHSLEGESLNDLLALLLSEILSPGSQNLQNDPTRS 223
Score = 41 (19.5 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 20/93 (21%), Positives = 40/93 (43%)
Query: 817 AAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYP-----WFAQY 871
A E + T A + + + N I ++E K + I+++ YP WF+ +
Sbjct: 1946 AGIEYKRTSSNAVFNTKSSYYTLLFNLIQNGSIEMKYQIILSIVEQLRYPNIHTYWFS-F 2004
Query: 872 MVMKRASIEPNFHDLYLKFLDKVNSKALNREIV 904
++M + ++D L+ + + L R IV
Sbjct: 2005 VLMNMFKSD-EWNDQKLEVQEIILRNFLKRIIV 2036
Score = 39 (18.8 bits), Expect = 1.1e-85, Sum P(5) = 1.1e-85
Identities = 24/146 (16%), Positives = 62/146 (42%)
Query: 1178 VPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLK---DYAMESDETRIYNAAHLMVASLA 1234
+ +A+++ IK + + + E+V+ + E++I+ + +
Sbjct: 890 ITLALNKPIKHKNIAFREMLIEAYKENRLEIVVPFVTKILQRASESKIFKPPNPWTVGIL 949
Query: 1235 GSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLD-----LGCAVIEQ 1289
L + K + S++ ++ L+ + ++ L+ + + T + ++ LG +EQ
Sbjct: 950 KLLIELNEKANWKLSLTFEVEVLLKSFNLTTKSLKPSNFINTPEVIETLSGALGSITLEQ 1009
Query: 1290 AATDKAIQTIDGEIAQQLSLRRKHRE 1315
T++ Q I + QQ L + R+
Sbjct: 1010 QQTEQQRQIILMQQHQQQMLIYQQRQ 1035
Score = 37 (18.1 bits), Expect = 1.6e-84, Sum P(6) = 1.6e-84
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 1147 QLSTPIPNIGTHVIINQKLTALGLHLHFQR 1176
++S IPN ++ + +L L L QR
Sbjct: 331 KVSETIPNTKQSLLYLLSIASLNLELFLQR 360
Score = 37 (18.1 bits), Expect = 1.6e-84, Sum P(6) = 1.6e-84
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 990 PPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFK-NLGVDM 1030
P P T ++ L A ++ P + D +V+FK +L + +
Sbjct: 270 PLMPTTASLSCLFAALHDGPVIDEFFSCDWKVIFKLDLAIQL 311
>CGD|CAL0001252 [details] [associations]
symbol:CDC39 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030015
"CCR4-NOT core complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0006368 "transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0007124 "pseudohyphal
growth" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0000749 "response to pheromone involved in
conjugation with cellular fusion" evidence=IEA] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
biotic stimulus" evidence=IMP] CGD:CAL0001252 GO:GO:0071216
GO:GO:0036180 GO:GO:0009267 GO:GO:0036170 EMBL:AACQ01000168
KO:K12604 InterPro:IPR007196 InterPro:IPR024557 Pfam:PF12842
Pfam:PF04054 RefSeq:XP_712097.1 ProteinModelPortal:Q59R01
STRING:Q59R01 GeneID:3646278 KEGG:cal:CaO19.1084 Uniprot:Q59R01
Length = 2016
Score = 496 (179.7 bits), Expect = 4.8e-144, Sum P(5) = 4.8e-144
Identities = 144/537 (26%), Positives = 248/537 (46%)
Query: 827 EAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDL 886
E P ++DK+ F +NN++ N+ + E E+L E Y+ WF+ Y+V RA EPN H+L
Sbjct: 652 EEPPESIRDKLLFSVNNMTGENL--RLSEIQEVLTESYFAWFSDYLVSDRAKAEPNNHEL 709
Query: 887 YLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQ 946
Y K + + + I+ + + ++ + K S ER+ LKNLG+WLG++T+ ++
Sbjct: 710 YSKLVKSLANPIFFEYILNVSLKEVDYIIRN--FKDSRSERNQLKNLGAWLGRITLANDK 767
Query: 947 VLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIY 1006
LR I K L++EAY+ + ++PF KIL+ Q S ++PPNPW + ++ +LAE+Y
Sbjct: 768 PLRRDYIALKFLLVEAYDFNSLPLILPFVCKILDQAQYSKVFKPPNPWVVGVMKVLAELY 827
Query: 1007 SMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVP 1066
+LK+ LKF+IEVL + + +KDI ++++++ E P + G S Q V
Sbjct: 828 ECADLKLQLKFEIEVLLNSFNMKIKDIEQSTIIRNHNPE----PTALARMFGISS-QSVN 882
Query: 1067 EVKPAIVSPLGHVDLPLDVASP-PNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISD 1125
L L ++ +P P + + P L + ++
Sbjct: 883 LANEMTRLSLEGSQLGNNIQAPFPQQIIESKQFPGISQPQM--QNVLQQQQQQQQQQQQQ 940
Query: 1126 QLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRA 1185
QLP Q L Q P Q + P + +I + H + +R ++ RA
Sbjct: 941 QLPPQQQL----PGQLP--PQQQAEPALDTSFSTLIGNSIFTQ--HANLRRAFQASLSRA 992
Query: 1186 IKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCK-- 1243
++E I + V TTK L+ KD+A E D + N+ + SL S A V+C
Sbjct: 993 VRECTPHICNKVVETVVTTTKALITKDFATERDIEKFRNSYQKLALSL--SHAMVSCNGR 1050
Query: 1244 ----EPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTI 1299
E + ++ L N+ + +A L A+Q N+ L +++ + + I
Sbjct: 1051 KALVETIEATMLQLLGNNPNEVPLAE--LNSAIQA----NVGLCVDIVDVLVGESILDII 1104
Query: 1300 DGEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDF 1356
+ + ++ LR H + F + S+ +P L LS Q ++YE F
Sbjct: 1105 EARMQTEVFLREHHTATAPNEPFIAEGASDYSLRLPNPLGLALTGLSAQQLKIYEHF 1161
Score = 476 (172.6 bits), Expect = 4.8e-144, Sum P(5) = 4.8e-144
Identities = 113/312 (36%), Positives = 173/312 (55%)
Query: 1972 NAELGVPV-RFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRN 2030
N++ G V YK R+ + +LHDFPEFL + H+ IP IQ+RNI+LSA P++
Sbjct: 1718 NSQQGPEVINVTYKAINRIFIGILHDFPEFLVECHYQLVTSIPRGYIQLRNIVLSATPKD 1777
Query: 2031 MRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELK 2090
+ +PDP T LK++ LPEI + P +F + L ++ V+++L+ PG + +
Sbjct: 1778 IHVPDPFTQGLKVERLPEINESPVVFYKPIEDLSKVGLKKPVENFLRIPAPG--LMRTIY 1835
Query: 2091 QKLLL-PPSEAASAG----TRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTA 2145
L L P E G +N+ LIN+LVL+VG+ ++ R + + SS A
Sbjct: 1836 NGLKLNQPKEVNELGYEETINFNIKLINALVLHVGISSVAD---RLPNNRGFNTKSSQVA 1892
Query: 2146 FLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAE------- 2198
LV L+ +TE +Y +NA ANQLRYPN+HTH+F ++L+ ++
Sbjct: 1893 LLVD--------LMNYGNTEFKYHLINAIANQLRYPNSHTHWFIGIILHFFSNNNIWNSN 1944
Query: 2199 ANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIR-CAPEIEKLF 2257
N+ ++QE ITRVL ER I N+PHPWGL I F EL+KN Y F+ F++ E++ +F
Sbjct: 1945 GNKLVVQEIITRVLLERRISNKPHPWGLTILFTELVKNGDYGFFELPFVKDSVEEVKNIF 2004
Query: 2258 ESVARSCGGLKP 2269
++ + G P
Sbjct: 2005 NVLSINVKGSTP 2016
Score = 307 (113.1 bits), Expect = 4.8e-144, Sum P(5) = 4.8e-144
Identities = 89/315 (28%), Positives = 155/315 (49%)
Query: 382 DCTIRILEICQELKILSSVLEMI---PSPFAIRLAVIAS-----QKELVDLE-KWLSINL 432
D ++L + + +L++ S AI++ V +S K ++D + K +
Sbjct: 302 DAADKVLTLASSFGLTQEILDIFWAFDSKIAIKILVESSLFGYDYKSVIDSKLKDPQVKT 361
Query: 433 STYKDVFFEECLKFVKEVQFGRSQDFS-AQPFHHSGALLNLYMEKIPVILKLLKAHIGLI 491
S Y+ + E L + + R Q AQ AL + KIP + LL+ I
Sbjct: 362 SIYQALC--EALDERAQKDYERGQQVQQAQQLQQQQALPPHQVLKIPTVYYLLEK-IKSS 418
Query: 492 TSTKLSEEIEKFQAVVLDSTPRL---QNG--EA--ADSSTSEGYADDIEAEANSYFHQMF 544
++ + Q ++L + PRL NG EA A+ S + +E E +Y+ +M+
Sbjct: 419 NGVVDAKTLRNLQLLLLTTYPRLINFGNGHDEAILANEEKSPFFPPSVEMEMKAYYSKMY 478
Query: 545 SGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSI 604
+ +L I+ +V ML + K S +F CMI +L +EY+FF +YP L ++LFG++
Sbjct: 479 NKELEIKEIVDMLTQMKASDDLHSQDVFACMIHSLLDEYKFFSEYPLSALASTSLLFGAL 538
Query: 605 IKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISH 664
++ L+ TL +AL + ++ +P DS +F F ++L F RL E+P YC H+L+
Sbjct: 539 LEKDLIQGTTLTVALNFIWESCNQPQDSHLFKFAVQSLYNFKSRLHEYPIYCKHLLECRS 598
Query: 665 LRSTHAELVAFIERA 679
L S HA++ ++ A
Sbjct: 599 L-SAHAKMYQIVKDA 612
Score = 253 (94.1 bits), Expect = 4.8e-144, Sum P(5) = 4.8e-144
Identities = 69/234 (29%), Positives = 116/234 (49%)
Query: 1748 QVSMLFAEWYQICELPGSNDAACT---RYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHC 1804
Q+ +FAEW ++ L +DA +V L Q+G+L + FF+ E+S+
Sbjct: 1458 QLGYIFAEWVRL--LTHGDDATNELQIEFVKGLIQSGILNNPEYVKTFFKAAIEISITSF 1515
Query: 1805 LSSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVK 1864
+ + T + A+D A L++ I+ VE I L K+L + +
Sbjct: 1516 ATEHELRSRTQHET-------YFAVDTLAMLIVRIVLL--VEDSKQAIDYLKKVLGIIIL 1566
Query: 1865 FILKDAEEKKASFNPRPYFRLFINWL---LDMSSLDP-VADGSNFQILSAFANAFHVLQP 1920
++ D E KA++N R YFR F + L D S LD V + + + F+ LQP
Sbjct: 1567 NLINDHETSKANWNERAYFRFFSSLLSTWCDASVLDEEVTVNLDVKFYNYLGELFNALQP 1626
Query: 1921 LKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAE 1974
+ +P F+FAW+ L+SHR ++PKLL +KG+ + +LL + L+F + + N +
Sbjct: 1627 IVLPGFTFAWISLISHRMYLPKLLELPERKGYATLVKLLSSALKFQQIYGNNKQ 1680
Score = 158 (60.7 bits), Expect = 4.8e-144, Sum P(5) = 4.8e-144
Identities = 53/233 (22%), Positives = 102/233 (43%)
Query: 1460 PAATELYAADSTEPVKEPGASSQSLPST-AAPERIGSSILEPSLQTRDALDKYHIVAQKL 1518
P +T + AA + P ++ S + + P+ I S + T + +V++
Sbjct: 1201 PVSTVVAAAPAPAPPQQQQQSKERIAQAQGVPDDIVSFEQLFTAITANCDKAVQLVSEVT 1260
Query: 1519 DALIGNDAREAEVQGVISEVPEII-LRCISRDEAALAVAQKVFKGLYENASNN-LHFSAH 1576
+ + + + +++ I I E L AQ L+ N + +
Sbjct: 1261 ETKLADLPPNHSIMAALTQALVIAQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIY 1320
Query: 1577 LAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDG 1636
+ IL + + K++ W+++S ++RKFN + + L++ +L+ + ++ + KLI
Sbjct: 1321 VVILDKLCEYSPSTAKDVIWWLVHSSDQRKFNMPVMLSLLKVQLIQPIKLDLSIGKLIKE 1380
Query: 1637 GRNKAATEFAISLLQTLVT-DESRVVI--SELHNLVDALAKLAAKPGSPESLQ 1686
N +FA SLL + T +E R + SE N +DAL+K A S E Q
Sbjct: 1381 TNNPVVVKFAASLLTNIFTSEEMRPIALRSEFANTLDALSKYQANDQSEEDRQ 1433
Score = 50 (22.7 bits), Expect = 3.8e-117, Sum P(5) = 3.8e-117
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 546 GQLTIEAM--VQMLARFKESSVKREHSIFE------CMIGNLFE-EYRFFPKY 589
G+L I+ + +Q + ++ +++H + E + LFE +YR FP+Y
Sbjct: 188 GKLEIQVITKIQQQQQQQQQQQQQQHQLSEQDKKLNAFLNQLFEHDYRVFPEY 240
Score = 50 (22.7 bits), Expect = 2.8e-86, Sum P(4) = 2.8e-86
Identities = 22/97 (22%), Positives = 38/97 (39%)
Query: 1632 KLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLAAKPGSPESLQQLIEI 1691
KL+ N +S +Q ++T+ S+ LV AK A+P + E +L++
Sbjct: 661 KLLFSVNNMTGENLRLSEIQEVLTESYFAWFSDY--LVSDRAK--AEPNNHELYSKLVKS 716
Query: 1692 VRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTAN 1728
+ NP D R KD ++ + N
Sbjct: 717 LANPIFFEYILNVSLKEVDYIIRNFKDSRSERNQLKN 753
Score = 49 (22.3 bits), Expect = 3.6e-86, Sum P(4) = 3.6e-86
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 1570 NLHFSAHLAILAAIRD----VCKLVVKEL-TSWVIYSDEERKFNRDITMGLIRSELLNLA 1624
NL + ++ A+R+ +C VV+ + T+ ++ RDI R+ LA
Sbjct: 980 NLRRAFQASLSRAVRECTPHICNKVVETVVTTTKALITKDFATERDIEK--FRNSYQKLA 1037
Query: 1625 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDA 1671
H A + GR ++LQ L + + V ++EL++ + A
Sbjct: 1038 LSLSH-AMVSCNGRKALVETIEATMLQLLGNNPNEVPLAELNSAIQA 1083
Score = 49 (22.3 bits), Expect = 3.6e-86, Sum P(4) = 3.6e-86
Identities = 45/214 (21%), Positives = 85/214 (39%)
Query: 1085 VASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQSQSPFS 1144
+ PP S G T +Q APL+ + + ++ + + P+ Q QS
Sbjct: 1169 IVPPPGSTGITQQQTQSLAPLQQQQQQQQQQQPVSTVVAAAPAPAPP----QQQQQSKER 1224
Query: 1145 VSQLSTPIPNIGTHVIINQKLTALGLHLH--FQRVVPIAMDRAIK-----EIVSGIVQRS 1197
++Q + +P+ V Q TA+ + Q V + + I++ + Q
Sbjct: 1225 IAQ-AQGVPD--DIVSFEQLFTAITANCDKAVQLVSEVTETKLADLPPNHSIMAALTQAL 1281
Query: 1198 VSIATQTTK--ELVLK--DYAM-----ESDETRIYNAAHLMVASLAGSLAHVTCKEPLRG 1248
V T K EL+LK YA+ ++ E + N ++++ + T K+ +
Sbjct: 1282 VIAQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIYVVILDKLCEYSPSTAKDVIWW 1341
Query: 1249 SISSQLRNSLQGLTIASELLEQAVQLVTNDNLDL 1282
+ S + + + LL+ VQL+ LDL
Sbjct: 1342 LVHSSDQRKFN-MPVMLSLLK--VQLIQPIKLDL 1372
Score = 48 (22.0 bits), Expect = 1.3e-59, Sum P(3) = 1.3e-59
Identities = 22/90 (24%), Positives = 37/90 (41%)
Query: 512 PRLQNGEAADSSTSEGYADDIEAEANSYFHQMFSG-QLTIEAMVQMLARFKESSVKR--- 567
P+ Q + ++G DDI + F Q+F+ + VQ+++ E+ +
Sbjct: 1215 PQQQQQSKERIAQAQGVPDDIVS-----FEQLFTAITANCDKAVQLVSEVTETKLADLPP 1269
Query: 568 EHSIFECMIGNLFEEYRFFPKYPERQLRIA 597
HSI + L KYPE L+ A
Sbjct: 1270 NHSIMAALTQALVIAQTNAIKYPELLLKAA 1299
Score = 47 (21.6 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 991 PNPWTMAIL--GLLAE----IYSMPNLKMNLKFDIEVLFKNLGVDMKDITP 1035
P+PW + IL L+ + +P +K +++ +++ +F L +++K TP
Sbjct: 1967 PHPWGLTILFTELVKNGDYGFFELPFVKDSVE-EVKNIFNVLSINVKGSTP 2016
Score = 46 (21.3 bits), Expect = 2.3e-111, Sum P(4) = 2.3e-111
Identities = 24/77 (31%), Positives = 32/77 (41%)
Query: 1602 DEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVV 1661
D + + GLI+S +LN EY K KAA E +I+ T SR
Sbjct: 1475 DATNELQIEFVKGLIQSGILNNPEY----VKTFF----KAAIEISITSFATEHELRSRTQ 1526
Query: 1662 ISELHNLVDALAKLAAK 1678
E + VD LA L +
Sbjct: 1527 -HETYFAVDTLAMLIVR 1542
Score = 45 (20.9 bits), Expect = 3.4e-70, Sum P(4) = 3.4e-70
Identities = 35/148 (23%), Positives = 57/148 (38%)
Query: 1093 GPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGL-----FQASQSQSPFSVSQ 1147
GP +LL + P L D+ +A + +P +QGL F +S S +Q
Sbjct: 11 GPENLLPEKLLPSLLQIKPNEIDQGIALILAEILIPGSQGLSQGLTFASSLPGSNAKGAQ 70
Query: 1148 LSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKE 1207
L +I N + H+H Q + + R I+ V I Q S+ +
Sbjct: 71 LQACFKSIENSGKFNVNWYEVFNHVH-QYLFD-SSQRDIQPSVGSITQFLSSLDFKQEPI 128
Query: 1208 LVLKDYAMESDETRIYNAAHLMVASLAG 1235
+ +Y ++T +Y H AS G
Sbjct: 129 DIFLNYEWWFNKTLLY-ILHSSDASQGG 155
Score = 41 (19.5 bits), Expect = 1.5e-77, Sum P(4) = 1.5e-77
Identities = 33/139 (23%), Positives = 56/139 (40%)
Query: 2125 HQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYL---FLNAAAN-QLRY 2180
H+L++RT H ++ +L +V L + + Q +D + L LN + +
Sbjct: 1519 HELRSRTQH-ETYFAVDTLAMLIVRIVL-LVEDSKQAIDYLKKVLGIIILNLINDHETSK 1576
Query: 2181 PN-NHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRY 2239
N N YF F L + ++ E++T L V + G L ++ I P +
Sbjct: 1577 ANWNERAYFRFFSSLLSTWCDASVLDEEVT----VNLDVKFYNYLGELFNALQPIVLPGF 1632
Query: 2240 NFWNQSFIRCAPEIEKLFE 2258
F S I + KL E
Sbjct: 1633 TFAWISLISHRMYLPKLLE 1651
Score = 39 (18.8 bits), Expect = 1.8e-66, Sum P(3) = 1.8e-66
Identities = 9/49 (18%), Positives = 22/49 (44%)
Query: 2173 AAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRP 2221
A N ++YP + + L+ + ++ + +I V+ ++L P
Sbjct: 1284 AQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIYVVILDKLCEYSP 1332
>UNIPROTKB|Q59R01 [details] [associations]
symbol:CDC39 "Potential mRNA deadenylase and CCR4-NOT
complex subunit Cdc39p" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
CGD:CAL0001252 GO:GO:0071216 GO:GO:0036180 GO:GO:0009267
GO:GO:0036170 EMBL:AACQ01000168 KO:K12604 InterPro:IPR007196
InterPro:IPR024557 Pfam:PF12842 Pfam:PF04054 RefSeq:XP_712097.1
ProteinModelPortal:Q59R01 STRING:Q59R01 GeneID:3646278
KEGG:cal:CaO19.1084 Uniprot:Q59R01
Length = 2016
Score = 496 (179.7 bits), Expect = 4.8e-144, Sum P(5) = 4.8e-144
Identities = 144/537 (26%), Positives = 248/537 (46%)
Query: 827 EAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDL 886
E P ++DK+ F +NN++ N+ + E E+L E Y+ WF+ Y+V RA EPN H+L
Sbjct: 652 EEPPESIRDKLLFSVNNMTGENL--RLSEIQEVLTESYFAWFSDYLVSDRAKAEPNNHEL 709
Query: 887 YLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQ 946
Y K + + + I+ + + ++ + K S ER+ LKNLG+WLG++T+ ++
Sbjct: 710 YSKLVKSLANPIFFEYILNVSLKEVDYIIRN--FKDSRSERNQLKNLGAWLGRITLANDK 767
Query: 947 VLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIY 1006
LR I K L++EAY+ + ++PF KIL+ Q S ++PPNPW + ++ +LAE+Y
Sbjct: 768 PLRRDYIALKFLLVEAYDFNSLPLILPFVCKILDQAQYSKVFKPPNPWVVGVMKVLAELY 827
Query: 1007 SMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVP 1066
+LK+ LKF+IEVL + + +KDI ++++++ E P + G S Q V
Sbjct: 828 ECADLKLQLKFEIEVLLNSFNMKIKDIEQSTIIRNHNPE----PTALARMFGISS-QSVN 882
Query: 1067 EVKPAIVSPLGHVDLPLDVASP-PNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISD 1125
L L ++ +P P + + P L + ++
Sbjct: 883 LANEMTRLSLEGSQLGNNIQAPFPQQIIESKQFPGISQPQM--QNVLQQQQQQQQQQQQQ 940
Query: 1126 QLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRA 1185
QLP Q L Q P Q + P + +I + H + +R ++ RA
Sbjct: 941 QLPPQQQL----PGQLP--PQQQAEPALDTSFSTLIGNSIFTQ--HANLRRAFQASLSRA 992
Query: 1186 IKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCK-- 1243
++E I + V TTK L+ KD+A E D + N+ + SL S A V+C
Sbjct: 993 VRECTPHICNKVVETVVTTTKALITKDFATERDIEKFRNSYQKLALSL--SHAMVSCNGR 1050
Query: 1244 ----EPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTI 1299
E + ++ L N+ + +A L A+Q N+ L +++ + + I
Sbjct: 1051 KALVETIEATMLQLLGNNPNEVPLAE--LNSAIQA----NVGLCVDIVDVLVGESILDII 1104
Query: 1300 DGEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDF 1356
+ + ++ LR H + F + S+ +P L LS Q ++YE F
Sbjct: 1105 EARMQTEVFLREHHTATAPNEPFIAEGASDYSLRLPNPLGLALTGLSAQQLKIYEHF 1161
Score = 476 (172.6 bits), Expect = 4.8e-144, Sum P(5) = 4.8e-144
Identities = 113/312 (36%), Positives = 173/312 (55%)
Query: 1972 NAELGVPV-RFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRN 2030
N++ G V YK R+ + +LHDFPEFL + H+ IP IQ+RNI+LSA P++
Sbjct: 1718 NSQQGPEVINVTYKAINRIFIGILHDFPEFLVECHYQLVTSIPRGYIQLRNIVLSATPKD 1777
Query: 2031 MRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELK 2090
+ +PDP T LK++ LPEI + P +F + L ++ V+++L+ PG + +
Sbjct: 1778 IHVPDPFTQGLKVERLPEINESPVVFYKPIEDLSKVGLKKPVENFLRIPAPG--LMRTIY 1835
Query: 2091 QKLLL-PPSEAASAG----TRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTA 2145
L L P E G +N+ LIN+LVL+VG+ ++ R + + SS A
Sbjct: 1836 NGLKLNQPKEVNELGYEETINFNIKLINALVLHVGISSVAD---RLPNNRGFNTKSSQVA 1892
Query: 2146 FLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAE------- 2198
LV L+ +TE +Y +NA ANQLRYPN+HTH+F ++L+ ++
Sbjct: 1893 LLVD--------LMNYGNTEFKYHLINAIANQLRYPNSHTHWFIGIILHFFSNNNIWNSN 1944
Query: 2199 ANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIR-CAPEIEKLF 2257
N+ ++QE ITRVL ER I N+PHPWGL I F EL+KN Y F+ F++ E++ +F
Sbjct: 1945 GNKLVVQEIITRVLLERRISNKPHPWGLTILFTELVKNGDYGFFELPFVKDSVEEVKNIF 2004
Query: 2258 ESVARSCGGLKP 2269
++ + G P
Sbjct: 2005 NVLSINVKGSTP 2016
Score = 307 (113.1 bits), Expect = 4.8e-144, Sum P(5) = 4.8e-144
Identities = 89/315 (28%), Positives = 155/315 (49%)
Query: 382 DCTIRILEICQELKILSSVLEMI---PSPFAIRLAVIAS-----QKELVDLE-KWLSINL 432
D ++L + + +L++ S AI++ V +S K ++D + K +
Sbjct: 302 DAADKVLTLASSFGLTQEILDIFWAFDSKIAIKILVESSLFGYDYKSVIDSKLKDPQVKT 361
Query: 433 STYKDVFFEECLKFVKEVQFGRSQDFS-AQPFHHSGALLNLYMEKIPVILKLLKAHIGLI 491
S Y+ + E L + + R Q AQ AL + KIP + LL+ I
Sbjct: 362 SIYQALC--EALDERAQKDYERGQQVQQAQQLQQQQALPPHQVLKIPTVYYLLEK-IKSS 418
Query: 492 TSTKLSEEIEKFQAVVLDSTPRL---QNG--EA--ADSSTSEGYADDIEAEANSYFHQMF 544
++ + Q ++L + PRL NG EA A+ S + +E E +Y+ +M+
Sbjct: 419 NGVVDAKTLRNLQLLLLTTYPRLINFGNGHDEAILANEEKSPFFPPSVEMEMKAYYSKMY 478
Query: 545 SGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSI 604
+ +L I+ +V ML + K S +F CMI +L +EY+FF +YP L ++LFG++
Sbjct: 479 NKELEIKEIVDMLTQMKASDDLHSQDVFACMIHSLLDEYKFFSEYPLSALASTSLLFGAL 538
Query: 605 IKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISH 664
++ L+ TL +AL + ++ +P DS +F F ++L F RL E+P YC H+L+
Sbjct: 539 LEKDLIQGTTLTVALNFIWESCNQPQDSHLFKFAVQSLYNFKSRLHEYPIYCKHLLECRS 598
Query: 665 LRSTHAELVAFIERA 679
L S HA++ ++ A
Sbjct: 599 L-SAHAKMYQIVKDA 612
Score = 253 (94.1 bits), Expect = 4.8e-144, Sum P(5) = 4.8e-144
Identities = 69/234 (29%), Positives = 116/234 (49%)
Query: 1748 QVSMLFAEWYQICELPGSNDAACT---RYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHC 1804
Q+ +FAEW ++ L +DA +V L Q+G+L + FF+ E+S+
Sbjct: 1458 QLGYIFAEWVRL--LTHGDDATNELQIEFVKGLIQSGILNNPEYVKTFFKAAIEISITSF 1515
Query: 1805 LSSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVK 1864
+ + T + A+D A L++ I+ VE I L K+L + +
Sbjct: 1516 ATEHELRSRTQHET-------YFAVDTLAMLIVRIVLL--VEDSKQAIDYLKKVLGIIIL 1566
Query: 1865 FILKDAEEKKASFNPRPYFRLFINWL---LDMSSLDP-VADGSNFQILSAFANAFHVLQP 1920
++ D E KA++N R YFR F + L D S LD V + + + F+ LQP
Sbjct: 1567 NLINDHETSKANWNERAYFRFFSSLLSTWCDASVLDEEVTVNLDVKFYNYLGELFNALQP 1626
Query: 1921 LKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAE 1974
+ +P F+FAW+ L+SHR ++PKLL +KG+ + +LL + L+F + + N +
Sbjct: 1627 IVLPGFTFAWISLISHRMYLPKLLELPERKGYATLVKLLSSALKFQQIYGNNKQ 1680
Score = 158 (60.7 bits), Expect = 4.8e-144, Sum P(5) = 4.8e-144
Identities = 53/233 (22%), Positives = 102/233 (43%)
Query: 1460 PAATELYAADSTEPVKEPGASSQSLPST-AAPERIGSSILEPSLQTRDALDKYHIVAQKL 1518
P +T + AA + P ++ S + + P+ I S + T + +V++
Sbjct: 1201 PVSTVVAAAPAPAPPQQQQQSKERIAQAQGVPDDIVSFEQLFTAITANCDKAVQLVSEVT 1260
Query: 1519 DALIGNDAREAEVQGVISEVPEII-LRCISRDEAALAVAQKVFKGLYENASNN-LHFSAH 1576
+ + + + +++ I I E L AQ L+ N + +
Sbjct: 1261 ETKLADLPPNHSIMAALTQALVIAQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIY 1320
Query: 1577 LAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDG 1636
+ IL + + K++ W+++S ++RKFN + + L++ +L+ + ++ + KLI
Sbjct: 1321 VVILDKLCEYSPSTAKDVIWWLVHSSDQRKFNMPVMLSLLKVQLIQPIKLDLSIGKLIKE 1380
Query: 1637 GRNKAATEFAISLLQTLVT-DESRVVI--SELHNLVDALAKLAAKPGSPESLQ 1686
N +FA SLL + T +E R + SE N +DAL+K A S E Q
Sbjct: 1381 TNNPVVVKFAASLLTNIFTSEEMRPIALRSEFANTLDALSKYQANDQSEEDRQ 1433
Score = 50 (22.7 bits), Expect = 3.8e-117, Sum P(5) = 3.8e-117
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 546 GQLTIEAM--VQMLARFKESSVKREHSIFE------CMIGNLFE-EYRFFPKY 589
G+L I+ + +Q + ++ +++H + E + LFE +YR FP+Y
Sbjct: 188 GKLEIQVITKIQQQQQQQQQQQQQQHQLSEQDKKLNAFLNQLFEHDYRVFPEY 240
Score = 50 (22.7 bits), Expect = 2.8e-86, Sum P(4) = 2.8e-86
Identities = 22/97 (22%), Positives = 38/97 (39%)
Query: 1632 KLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLAAKPGSPESLQQLIEI 1691
KL+ N +S +Q ++T+ S+ LV AK A+P + E +L++
Sbjct: 661 KLLFSVNNMTGENLRLSEIQEVLTESYFAWFSDY--LVSDRAK--AEPNNHELYSKLVKS 716
Query: 1692 VRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTAN 1728
+ NP D R KD ++ + N
Sbjct: 717 LANPIFFEYILNVSLKEVDYIIRNFKDSRSERNQLKN 753
Score = 49 (22.3 bits), Expect = 3.6e-86, Sum P(4) = 3.6e-86
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 1570 NLHFSAHLAILAAIRD----VCKLVVKEL-TSWVIYSDEERKFNRDITMGLIRSELLNLA 1624
NL + ++ A+R+ +C VV+ + T+ ++ RDI R+ LA
Sbjct: 980 NLRRAFQASLSRAVRECTPHICNKVVETVVTTTKALITKDFATERDIEK--FRNSYQKLA 1037
Query: 1625 EYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDA 1671
H A + GR ++LQ L + + V ++EL++ + A
Sbjct: 1038 LSLSH-AMVSCNGRKALVETIEATMLQLLGNNPNEVPLAELNSAIQA 1083
Score = 49 (22.3 bits), Expect = 3.6e-86, Sum P(4) = 3.6e-86
Identities = 45/214 (21%), Positives = 85/214 (39%)
Query: 1085 VASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQSQSPFS 1144
+ PP S G T +Q APL+ + + ++ + + P+ Q QS
Sbjct: 1169 IVPPPGSTGITQQQTQSLAPLQQQQQQQQQQQPVSTVVAAAPAPAPP----QQQQQSKER 1224
Query: 1145 VSQLSTPIPNIGTHVIINQKLTALGLHLH--FQRVVPIAMDRAIK-----EIVSGIVQRS 1197
++Q + +P+ V Q TA+ + Q V + + I++ + Q
Sbjct: 1225 IAQ-AQGVPD--DIVSFEQLFTAITANCDKAVQLVSEVTETKLADLPPNHSIMAALTQAL 1281
Query: 1198 VSIATQTTK--ELVLK--DYAM-----ESDETRIYNAAHLMVASLAGSLAHVTCKEPLRG 1248
V T K EL+LK YA+ ++ E + N ++++ + T K+ +
Sbjct: 1282 VIAQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIYVVILDKLCEYSPSTAKDVIWW 1341
Query: 1249 SISSQLRNSLQGLTIASELLEQAVQLVTNDNLDL 1282
+ S + + + LL+ VQL+ LDL
Sbjct: 1342 LVHSSDQRKFN-MPVMLSLLK--VQLIQPIKLDL 1372
Score = 48 (22.0 bits), Expect = 1.3e-59, Sum P(3) = 1.3e-59
Identities = 22/90 (24%), Positives = 37/90 (41%)
Query: 512 PRLQNGEAADSSTSEGYADDIEAEANSYFHQMFSG-QLTIEAMVQMLARFKESSVKR--- 567
P+ Q + ++G DDI + F Q+F+ + VQ+++ E+ +
Sbjct: 1215 PQQQQQSKERIAQAQGVPDDIVS-----FEQLFTAITANCDKAVQLVSEVTETKLADLPP 1269
Query: 568 EHSIFECMIGNLFEEYRFFPKYPERQLRIA 597
HSI + L KYPE L+ A
Sbjct: 1270 NHSIMAALTQALVIAQTNAIKYPELLLKAA 1299
Score = 47 (21.6 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 991 PNPWTMAIL--GLLAE----IYSMPNLKMNLKFDIEVLFKNLGVDMKDITP 1035
P+PW + IL L+ + +P +K +++ +++ +F L +++K TP
Sbjct: 1967 PHPWGLTILFTELVKNGDYGFFELPFVKDSVE-EVKNIFNVLSINVKGSTP 2016
Score = 46 (21.3 bits), Expect = 2.3e-111, Sum P(4) = 2.3e-111
Identities = 24/77 (31%), Positives = 32/77 (41%)
Query: 1602 DEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVV 1661
D + + GLI+S +LN EY K KAA E +I+ T SR
Sbjct: 1475 DATNELQIEFVKGLIQSGILNNPEY----VKTFF----KAAIEISITSFATEHELRSRTQ 1526
Query: 1662 ISELHNLVDALAKLAAK 1678
E + VD LA L +
Sbjct: 1527 -HETYFAVDTLAMLIVR 1542
Score = 45 (20.9 bits), Expect = 3.4e-70, Sum P(4) = 3.4e-70
Identities = 35/148 (23%), Positives = 57/148 (38%)
Query: 1093 GPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGL-----FQASQSQSPFSVSQ 1147
GP +LL + P L D+ +A + +P +QGL F +S S +Q
Sbjct: 11 GPENLLPEKLLPSLLQIKPNEIDQGIALILAEILIPGSQGLSQGLTFASSLPGSNAKGAQ 70
Query: 1148 LSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKE 1207
L +I N + H+H Q + + R I+ V I Q S+ +
Sbjct: 71 LQACFKSIENSGKFNVNWYEVFNHVH-QYLFD-SSQRDIQPSVGSITQFLSSLDFKQEPI 128
Query: 1208 LVLKDYAMESDETRIYNAAHLMVASLAG 1235
+ +Y ++T +Y H AS G
Sbjct: 129 DIFLNYEWWFNKTLLY-ILHSSDASQGG 155
Score = 41 (19.5 bits), Expect = 1.5e-77, Sum P(4) = 1.5e-77
Identities = 33/139 (23%), Positives = 56/139 (40%)
Query: 2125 HQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYL---FLNAAAN-QLRY 2180
H+L++RT H ++ +L +V L + + Q +D + L LN + +
Sbjct: 1519 HELRSRTQH-ETYFAVDTLAMLIVRIVL-LVEDSKQAIDYLKKVLGIIILNLINDHETSK 1576
Query: 2181 PN-NHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRY 2239
N N YF F L + ++ E++T L V + G L ++ I P +
Sbjct: 1577 ANWNERAYFRFFSSLLSTWCDASVLDEEVT----VNLDVKFYNYLGELFNALQPIVLPGF 1632
Query: 2240 NFWNQSFIRCAPEIEKLFE 2258
F S I + KL E
Sbjct: 1633 TFAWISLISHRMYLPKLLE 1651
Score = 39 (18.8 bits), Expect = 1.8e-66, Sum P(3) = 1.8e-66
Identities = 9/49 (18%), Positives = 22/49 (44%)
Query: 2173 AAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRP 2221
A N ++YP + + L+ + ++ + +I V+ ++L P
Sbjct: 1284 AQTNAIKYPELLLKAAQYAVNCLFTQTHENPMSNEIYVVILDKLCEYSP 1332
>RGD|1308009 [details] [associations]
symbol:Cnot1 "CCR4-NOT transcription complex, subunit 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010606 "positive regulation of cytoplasmic mRNA
processing body assembly" evidence=ISO] [GO:0030014 "CCR4-NOT
complex" evidence=ISO] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033147 "negative regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0042974
"retinoic acid receptor binding" evidence=ISO] [GO:0048387
"negative regulation of retinoic acid receptor signaling pathway"
evidence=ISO] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISO]
[GO:1900153 "positive regulation of nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=ISO]
[GO:2000036 "regulation of stem cell maintenance" evidence=ISO]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=ISO]
RGD:1308009 GO:GO:0005778 GO:GO:0000932 InterPro:IPR007196
Pfam:PF04054 UniGene:Rn.56498 EMBL:BC086325 IPI:IPI00359049
STRING:Q5RK32 PRIDE:Q5RK32 UCSC:RGD:1308009 HOVERGEN:HBG106203
InParanoid:Q5RK32 ArrayExpress:Q5RK32 Genevestigator:Q5RK32
Uniprot:Q5RK32
Length = 455
Score = 1275 (453.9 bits), Expect = 8.6e-129, P = 8.6e-129
Identities = 251/448 (56%), Positives = 320/448 (71%)
Query: 1829 IDIYAKLMLSILKCCPVEQGS-SKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFI 1887
+D + +L+ ++K + +KI LL+K+L + V +L+D + +++ F PY R+FI
Sbjct: 15 LDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFI 74
Query: 1888 NWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGN 1947
LL++++ + V + NFQ L+AF N FH+L+P K P F +AWLEL+SHR F+ ++L
Sbjct: 75 MLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLAHT 134
Query: 1948 GQ-KGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHF 2006
Q KGWP +LL++L ++L PFLRN EL P++ LYKGTLRVLLVLLHDFPEFLCDYH+
Sbjct: 135 PQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHY 194
Query: 2007 TFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAK 2066
FCDVIPP+CIQ+RN+ILSAFPRNMRLPDP TPNLK+D+L EI PRI + +
Sbjct: 195 GFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PP 253
Query: 2067 QMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQ 2126
Q + D+D YLKT P +FLS+L+ L + + G RYN+ LIN+LVLYVG QAI
Sbjct: 254 QFKKDLDSYLKTRSP-VTFLSDLRSNLQV----SNEPGNRYNLQLINALVLYVGTQAI-- 306
Query: 2127 LQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTH 2186
+H + G+ S++ SA +DIFQ L DLDTEGRYLFLNA ANQLRYPN+HTH
Sbjct: 307 -----AHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTH 361
Query: 2187 YFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSF 2246
YFS +LYL+AEAN E IQEQITRVL ERLIVNRPHPWGLLITFIELIKNP + FWN F
Sbjct: 362 YFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEF 421
Query: 2247 IRCAPEIEKLFESVARSCGGLKPVDDSM 2274
+ CAPEIEKLF+SVA+ C G K M
Sbjct: 422 VHCAPEIEKLFQSVAQCCMGQKQAQQVM 449
>DICTYBASE|DDB_G0287399 [details] [associations]
symbol:DDB_G0287399 species:44689 "Dictyostelium
discoideum" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0287399
GO:GO:0005576 EMBL:AAFI02000100 eggNOG:NOG12793 RefSeq:XP_637288.1
EnsemblProtists:DDB0187468 GeneID:8626120 KEGG:ddi:DDB_G0287399
OMA:ETINIFH Uniprot:Q54KD5
Length = 486
Score = 125 (49.1 bits), Expect = 0.00082, P = 0.00082
Identities = 42/145 (28%), Positives = 73/145 (50%)
Query: 1365 SSQGSHA-MSAGSLTSSGDAAQASAYGLAGGQGNQGYSS--SAGST-----GFDAVSRPS 1416
SS GS S+G+++SSG A+ ++ G G + G SS S+GS+ G + S+
Sbjct: 52 SSSGSGTGQSSGTVSSSGSASNNTSSGSQSGNASSGSSSGSSSGSSSGSSSGSSSGSQSG 111
Query: 1417 DVASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKE 1476
+ +SG++ S S+G S + G + G + S+S NA+ P++ ++ S++
Sbjct: 112 NASSGSSSSGSSGSQSGN-ASSGTSSGSSSSSGSSQSGNASSGPSSGTTSSSGSSQSESS 170
Query: 1477 PGASSQSLPSTAAPERIGSSILEPS 1501
++ S PS+ GSS E S
Sbjct: 171 QSGNASSGPSSGTTSSSGSSQSESS 195
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 2284 2228 0.00093 126 3 11 22 0.39 34
41 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 635 (67 KB)
Total size of DFA: 772 KB (2328 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 204.14u 0.19s 204.33t Elapsed: 00:00:10
Total cpu time: 204.18u 0.19s 204.37t Elapsed: 00:00:10
Start: Thu May 9 21:37:36 2013 End: Thu May 9 21:37:46 2013