Query 000087
Match_columns 2284
No_of_seqs 216 out of 285
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 14:24:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000087.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/000087hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hu3a_ a.118.1.14 (A:) Eukary 76.3 2.2 0.00016 46.5 8.1 185 831-1023 9-234 (243)
2 d1uw4b_ a.118.1.14 (B:) Regula 75.2 1.5 0.00011 48.8 6.1 189 831-1030 5-220 (248)
3 d1ug3a1 a.118.1.14 (A:1235-142 41.2 43 0.0031 35.0 9.9 89 530-628 7-95 (193)
4 d1h2vc1 a.118.1.14 (C:29-290) 28.1 71 0.0052 34.8 9.3 100 835-941 1-107 (262)
5 d1paqa_ a.118.1.14 (A:) Transl 19.8 1.5E+02 0.011 29.6 9.2 95 532-626 2-100 (161)
6 d2nsza1 a.118.1.14 (A:322-450) 16.4 2.5E+02 0.018 27.0 9.6 88 532-628 6-93 (129)
7 d1ujka_ a.118.9.2 (A:) ADP-rib 10.7 6.5E+02 0.047 24.2 12.1 37 1744-1784 109-145 (145)
8 d1uhua_ a.61.1.6 (A:) Product 7.8 85 0.0062 29.6 2.3 74 2151-2250 16-101 (105)
9 d2z15a1 d.370.1.1 (A:10-126) T 7.5 1.3E+02 0.0093 29.1 3.5 44 549-592 4-51 (117)
10 d1sxjb1 a.80.1.1 (B:231-322) R 7.2 87 0.0063 28.5 2.2 52 99-150 23-74 (92)
No 1
>d1hu3a_ a.118.1.14 (A:) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.33 E-value=2.2 Score=46.54 Aligned_cols=185 Identities=11% Similarity=0.112 Sum_probs=111.8
Q ss_pred hhhhHhHhhhhhcCCcccHHHHHHHHHHHhh--hcchhhhhHHHHHhhcccCCchhHHHHHHHHHhCChh----------
Q 000087 831 SEVQDKISFIINNISALNVEAKAKEFTEILK--EQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKA---------- 898 (2284)
Q Consensus 831 e~vqDKI~FIiNNlS~~Nle~K~~Elke~L~--~~y~~WFA~YLV~kRAsiEPNfH~LYl~fl~~l~~~~---------- 898 (2284)
+++..+|..++|-||++|++.=.+|+.++-. ++-..=+++- |.++|-.||+|=.+|.++...+....
T Consensus 9 ~~l~r~v~~lLNKLt~~n~~~i~~ei~~l~~~~~~~l~~~v~~-I~~kai~e~~f~~~YA~Lc~~l~~~~~~~~~~~~~~ 87 (243)
T d1hu3a_ 9 QELFRKVRSILNKLTPQMFNQLMKQVSGLTVDTEERLKGVIDL-VFEKAIDEPSFSVAYANMCRCLVTLKVPMADKPGNT 87 (243)
T ss_dssp HHHHHHHHHHHTCSSCCCHHHHHHHHTTCCCCSHHHHHHHHHH-HHHHHHHCGGGHHHHHHHHHHHTTCCCC--------
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHccCHHHHHHHHHH-HHHHHHcCccccHHHHHHHHHHHHhcCccccccccc
Confidence 3567789999999999999999999887632 2222334444 45679999999999999999987642
Q ss_pred --HHHHHHHHHHHHHHHHhccc-------------------------ccccChHHHHHHHhhhhhHhhhhhhcCcccccC
Q 000087 899 --LNREIVQATYENCKVLLGSE-------------------------LIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAR 951 (2284)
Q Consensus 899 --L~~~Vl~~Ty~~i~~LL~se-------------------------~~~~ss~eRslLKNLGsWLG~iTLarNkPI~~k 951 (2284)
+.+.+++.....-....... ........|....|+..++|.+..-+=-+.+.-
T Consensus 88 ~~F~~~Ll~~~q~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~k~~~~g~i~figeLy~~~~v~~~~i 167 (243)
T d1hu3a_ 88 VNFRKLLLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERTRLHDELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIM 167 (243)
T ss_dssp -CHHHHHHHHHHHHHHHHTC------------------------------CCSSHHHHHHHHHHHHHHHHTTTCSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhHhhhcccccccchHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHccccchHHHH
Confidence 33444444333222222110 001111234555577788888775432222111
Q ss_pred CCChhHHHHHHHhcCceEEEechhhhhccccCCCccccCCCccH--HHHHHHHHHHhcCCcccchhHHHHHHHH
Q 000087 952 EIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWT--MAILGLLAEIYSMPNLKMNLKFDIEVLF 1023 (2284)
Q Consensus 952 ~ld~K~LL~eaY~~g~L~~VIPFV~KVLe~~~~S~vFkPPNPWt--m~IL~lL~Ely~~~~LKlnLKFEIEVL~ 1023 (2284)
.--++.|+ +.... --|-.+|.+|..|... +.-++|+. =.++..|.++-..+++.--+||=|+-|+
T Consensus 168 ~~~l~~Ll-~~~~e----~~ie~l~~lL~~~G~~--L~~~~~~~~~~~~~~~l~~~~~~~~~s~Rirfml~~l~ 234 (243)
T d1hu3a_ 168 HDCVVKLL-KNHDE----ESLECLCRLLTTIGKD--LDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVI 234 (243)
T ss_dssp HHHHHHHH-HSCSH----HHHHHHHHHHHHHHHH--HCCTTTHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred HHHHHHhc-CCCCH----HHHHHHHHHHHHHHHH--HhccccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 11223332 22111 1255778888888754 34355553 3678888888888888888888887665
No 2
>d1uw4b_ a.118.1.14 (B:) Regulator of nonsense transcripts 2, UPF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.19 E-value=1.5 Score=48.76 Aligned_cols=189 Identities=12% Similarity=0.077 Sum_probs=122.8
Q ss_pred hhhhHhHhhhhhcCCcccHHHHHHHHHHHhh--hcchhhhhHHHHHhhcccCCchhHHHHHHHHHhCC--hhHHHHHHHH
Q 000087 831 SEVQDKISFIINNISALNVEAKAKEFTEILK--EQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNS--KALNREIVQA 906 (2284)
Q Consensus 831 e~vqDKI~FIiNNlS~~Nle~K~~Elke~L~--~~y~~WFA~YLV~kRAsiEPNfH~LYl~fl~~l~~--~~L~~~Vl~~ 906 (2284)
++.--|+ |+|.||+.|++.=+++++++=- ++-..++...++. -+..+++|=.+|..++..|.. +.+-..++..
T Consensus 5 ~~flr~l--i~n~Ls~~n~~~i~~~i~kl~~~n~e~~~~li~~i~~-~~~~~~~~i~~yA~l~a~L~~~~~~f~~~~id~ 81 (248)
T d1uw4b_ 5 QEYVRKL--LYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMIN-IWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDG 81 (248)
T ss_dssp HHHHHHH--HHTTCSTTSHHHHHHHHHTSCTTSHHHHHHHHHHHHC-GGGSCGGGHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHH--HHhhCCHhHHHHHHHHHHHCCCCCHHHHHHHHHHHhh-hhcCchhHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3444454 6899999999998888877632 4556788886665 599999999999999999964 4666777778
Q ss_pred HHHHHHHHhcccccccChHHHHHHHhhhhhHhhhhhhcCcccccCCCChhHHHHHHHhcCceE---------EEechhhh
Q 000087 907 TYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMI---------AVIPFTSK 977 (2284)
Q Consensus 907 Ty~~i~~LL~se~~~~ss~eRslLKNLGsWLG~iTLarNkPI~~k~ld~K~LL~eaY~~g~L~---------~VIPFV~K 977 (2284)
+...++.-+..++. .++...-+.-.++|-+..-+=-+...-.=-+..||-.+++.+.-. .-|=.+|+
T Consensus 82 l~e~f~~~~e~~~~----~~~~r~~~~v~figeLy~~~~v~~~~i~~~l~~Ll~~~~~~~~~~~~~d~~~d~~rIe~l~~ 157 (248)
T d1uw4b_ 82 VLEDIRLGMEVNQP----KFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVCT 157 (248)
T ss_dssp HHHHHHHHHHHCCG----GGHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTTCCTTSCCCSSSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHhcCCCcccccccCCCCcchhHHHHHHH
Confidence 88788777764422 233333344589999887665554443334556666666654210 11557999
Q ss_pred hccccCCCccccCCCccHHHHHH-HHH--H-----------HhcCCcccchhHHHHHHHHhhcCCCc
Q 000087 978 ILEPCQSSLAYQPPNPWTMAILG-LLA--E-----------IYSMPNLKMNLKFDIEVLFKNLGVDM 1030 (2284)
Q Consensus 978 VLe~~~~S~vFkPPNPWtm~IL~-lL~--E-----------ly~~~~LKlnLKFEIEVL~K~L~ld~ 1030 (2284)
+|+.|..+- .+++...-+. .+. + +-+...+-.-++|-|+-|+.-.+=++
T Consensus 158 lL~t~G~~l----~~~~~~~~l~~~~~~fq~y~~~~~~~~~~~~~~~lp~ri~f~i~dll~lr~~~w 220 (248)
T d1uw4b_ 158 ILDTCGQYF----DRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLELLRPKI 220 (248)
T ss_dssp HHHHHGGGC----SSHHHHHHHHHHHHHHHHHHHHHHTSTTCCSSSCCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhHHh----cCccchhhHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhCCC
Confidence 999998773 2333322222 111 1 11234466778999999998776444
No 3
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.15 E-value=43 Score=34.97 Aligned_cols=89 Identities=8% Similarity=0.084 Sum_probs=65.8
Q ss_pred hhHHHHHHHHHHHhhccCCCHHHHHHHHHHhhcCCcccchhhHHhHHHhhhhhhccCCCCcHHHHHHHHHHHHHHhhhcc
Q 000087 530 DDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQL 609 (2284)
Q Consensus 530 ~dIE~Ean~yfqkmYs~eisI~~iv~~L~r~K~S~~~rdqdiFaCMIh~LFdEYrFf~~YP~~eL~iTAvLFG~lI~~~L 609 (2284)
+|+++++++..+..|+. -.++|.+..++.++.. .-+ .++-.++|..-+| .-+++-..++.|+..|++.++
T Consensus 7 ee~~kk~~~il~Ey~~~-~D~~Ea~~~l~el~~p-~~~-~~~V~~~i~~~le-------~~~~~re~~~~Ll~~L~~~~~ 76 (193)
T d1ug3a1 7 EELEKKSKAIIEEYLHL-NDMKEAVQCVQELASP-SLL-FIFVRHGVESTLE-------RSAIAREHMGQLLHQLLCAGH 76 (193)
T ss_dssp HHHHHHHHHHHHHHHHH-CCHHHHHHHHHTTCCG-GGH-HHHHHHHHHHHTT-------TCHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhC-CCHHHHHHHHHHcCCc-hhH-HHHHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHCCC
Confidence 57888888888887775 3679999999888633 223 3333444444444 235566679999999999999
Q ss_pred cchhHHHHHHHHHHHHhcC
Q 000087 610 VTHLTLGIALRGVLDALRK 628 (2284)
Q Consensus 610 v~~~~L~iALr~ILeAlrk 628 (2284)
|+.-.+.-|+.-+++.+.+
T Consensus 77 is~~~~~~gf~~~l~~l~D 95 (193)
T d1ug3a1 77 LSTAQYYQGLYEILELAED 95 (193)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhh
Confidence 9999999999999887765
No 4
>d1h2vc1 a.118.1.14 (C:29-290) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.12 E-value=71 Score=34.81 Aligned_cols=100 Identities=17% Similarity=0.260 Sum_probs=73.8
Q ss_pred HhHhhhhhcCCc---ccHHHHHHHHHHHhhhcc--hhhhhHHHHHhhcccCCchhHHHHHHHHHhCCh--hHHHHHHHHH
Q 000087 835 DKISFIINNISA---LNVEAKAKEFTEILKEQY--YPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSK--ALNREIVQAT 907 (2284)
Q Consensus 835 DKI~FIiNNlS~---~Nle~K~~Elke~L~~~y--~~WFA~YLV~kRAsiEPNfH~LYl~fl~~l~~~--~L~~~Vl~~T 907 (2284)
||+-.+||-|++ .+++..+++|.+.+.++. ++.---=.+++-+...|.+-.+|.-++--+|.+ ++=+++++.+
T Consensus 1 drl~~LI~rige~~~~s~~~~ie~L~~~l~~~l~~~~~~il~~l~~~~~~~P~k~~~yA~Lv~llN~~~~e~g~~~l~~~ 80 (262)
T d1h2vc1 1 DHLESLICKVGEKSACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAM 80 (262)
T ss_dssp CHHHHHHHTTTSSCSSCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 567777887754 566777788877776653 222222234566888999999999998877754 6888999999
Q ss_pred HHHHHHHhcccccccChHHHHHHHhhhhhHhhhh
Q 000087 908 YENCKVLLGSELIKSSSEERSLLKNLGSWLGKLT 941 (2284)
Q Consensus 908 y~~i~~LL~se~~~~ss~eRslLKNLGsWLG~iT 941 (2284)
..+.+..+++. +..-.||+-.+||.+.
T Consensus 81 ~~~f~~~l~~~-------~~~~~~~llrFla~L~ 107 (262)
T d1h2vc1 81 IRQLKESLKAN-------NYNEAVYLVRFLSDLV 107 (262)
T ss_dssp HHHHHHHHHTT-------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-------CHHHHHHHHHHHHHHc
Confidence 99998888753 4567888888888874
No 5
>d1paqa_ a.118.1.14 (A:) Translation initiation factor eIF-2b epsilon {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=19.76 E-value=1.5e+02 Score=29.61 Aligned_cols=95 Identities=13% Similarity=0.120 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHhhccCCCHHHHHHHHHHhhcCCcccchhhHHhHHHhhhhhhccCC----CCcHHHHHHHHHHHHHHhhh
Q 000087 532 IEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFP----KYPERQLRIAAVLFGSIIKH 607 (2284)
Q Consensus 532 IE~Ean~yfqkmYs~eisI~~iv~~L~r~K~S~~~rdqdiFaCMIh~LFdEYrFf~----~YP~~eL~iTAvLFG~lI~~ 607 (2284)
-.+|+-.-++|-+....++|.++-.|+-+|-|-|--+.||=.|++..+.+--.-++ .=+.++++..=.=||.+++.
T Consensus 2 F~~Ev~~sl~r~~ee~~~~dn~iLElnslr~a~N~~~~dv~~av~~All~~i~~~~~~~~~~~~~~~~~~l~k~~~ll~~ 81 (161)
T d1paqa_ 2 FEKEGIATVERAMENNHDLDTALLELNTLRMSMNVTYHEVRIATITALLRRVYHFIATQTLGPKDAVVKVFNQWGLLFKR 81 (161)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHGGGGGG
T ss_pred hHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999888886432221 11223333322335666666
Q ss_pred cccchhHHHHHHHHHHHHh
Q 000087 608 QLVTHLTLGIALRGVLDAL 626 (2284)
Q Consensus 608 ~Lv~~~~L~iALr~ILeAl 626 (2284)
-+-+.-...-+|..|.+.+
T Consensus 82 ~~~~~~~q~~~L~~lq~~c 100 (161)
T d1paqa_ 82 QAFDEEEYIDLMNIIMEKI 100 (161)
T ss_dssp TCCSHHHHHHHHHHHHHHH
T ss_pred HcCCcHHHHHHHHHHHHHH
Confidence 5544433334455555555
No 6
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.36 E-value=2.5e+02 Score=26.97 Aligned_cols=88 Identities=11% Similarity=0.143 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhhccCCCHHHHHHHHHHhhcCCcccchhhHHhHHHhhhhhhccCCCCcHHHHHHHHHHHHHHhhhcccc
Q 000087 532 IEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVT 611 (2284)
Q Consensus 532 IE~Ean~yfqkmYs~eisI~~iv~~L~r~K~S~~~rdqdiFaCMIh~LFdEYrFf~~YP~~eL~iTAvLFG~lI~~~Lv~ 611 (2284)
..+++++..+-.++ .-.++|.+.-++.++ ++.-+..=|...+.++|-. =+.+.-..++.||..+...++|+
T Consensus 6 l~kk~~~ll~EY~~-~~D~~Ea~~~l~eL~-~p~~~~e~V~~~i~~ale~-------~~~~r~~~~~~Ll~~L~~~~~is 76 (129)
T d2nsza1 6 LVKEIDMLLKEYLL-SGDISEAEHCLKELE-VPHFHHELVYEAIVMVLES-------TGESAFKMILDLLKSLWKSSTIT 76 (129)
T ss_dssp HHHHHHHHHHHHHH-HCCHHHHHHHHHHHT-CGGGHHHHHHHHHHHHHHC-------CSSHHHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHh-CCCHHHHHHHHHHcC-CchhhHHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHHHCCCCC
Confidence 44555555555554 335788888888886 3444433444555555532 13333356899999999999999
Q ss_pred hhHHHHHHHHHHHHhcC
Q 000087 612 HLTLGIALRGVLDALRK 628 (2284)
Q Consensus 612 ~~~L~iALr~ILeAlrk 628 (2284)
.-.+..|+..+++.+.+
T Consensus 77 ~~~i~~Gf~~~l~~l~D 93 (129)
T d2nsza1 77 IDQMKRGYERIYNEIPD 93 (129)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcH
Confidence 99999999999887754
No 7
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.71 E-value=6.5e+02 Score=24.23 Aligned_cols=37 Identities=16% Similarity=0.314 Sum_probs=30.2
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHcCccc
Q 000087 1744 GFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLK 1784 (2284)
Q Consensus 1744 ~~~eq~~~lF~EWv~l~~~~~~~~~~~~~Fi~qL~~~giL~ 1784 (2284)
..++++-.++.+|-.-+ | +...+..-..+|..+||++
T Consensus 109 ~Vk~kil~li~~W~~~f--p--~~~~~~~~Y~~L~~~Gii~ 145 (145)
T d1ujka_ 109 KVKNKILELLYSWTVGL--P--EEVKIAEAYQMLKKQGIVK 145 (145)
T ss_dssp HHHHHHHHHHHHHHHHC--T--TCHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHC--C--CchHHHHHHHHHHHCCCcC
Confidence 56799999999998755 3 4667777888999999975
No 8
>d1uhua_ a.61.1.6 (A:) Product of RIKEN cDNA 3110009e22 {Unclassified, murine endogenous retrovirus [TaxId: 12908]}
Probab=7.75 E-value=85 Score=29.61 Aligned_cols=74 Identities=18% Similarity=0.315 Sum_probs=44.6
Q ss_pred HHHHHHHHHhccCh---hhHHHHHHHHH---hhhcCCChhhHHHHHHHHHHhhcccchhhHHHHHHHHHHHhccCCCCCh
Q 000087 2151 ALDIFQTLIQDLDT---EGRYLFLNAAA---NQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPW 2224 (2284)
Q Consensus 2151 ~~~il~~L~~~ld~---EgRY~ll~aia---NqLRYPN~HT~~FS~~lL~LF~~~~~~~IqEqItRVLLERlIv~rPHPW 2224 (2284)
|.+-++.-++++.. .||..++|+.. =-+.+|--=|..| ..|.+| +.+|.+|.||
T Consensus 16 hw~d~~~ra~n~sv~vkkgkl~tfC~seWPtf~vgWP~eGTf~~-----------------~~I~~v---~~~v~~~G~~ 75 (105)
T d1uhua_ 16 HWSEIRSRAHNLSVEIKKGPWRTFCASEWPTFDVGWPPEGTFDL-----------------TVIFEV---KAIVFQDGPG 75 (105)
T ss_dssp THHHHHHHHHHHTCCCCHHHHHHHHHHTSTTSSSSCCSSCCCCH-----------------HHHHHH---HHHHTCSSTT
T ss_pred HHHHHHHHHhhcCccccccceeeeecccCccCCCCCCCCCeech-----------------HHHHHH---HHHhhcCCCC
Confidence 44555556666554 46666666632 1233443333222 233333 5678899999
Q ss_pred H------HHHHHHHHhhCCCCccccCCcCcch
Q 000087 2225 G------LLITFIELIKNPRYNFWNQSFIRCA 2250 (2284)
Q Consensus 2225 G------LliTFiELikNp~Y~Fw~~~Fv~~a 2250 (2284)
| -+.||.+|..|| -+++|.-
T Consensus 76 gHpDqvPYI~tw~~La~~P------Ppw~k~~ 101 (105)
T d1uhua_ 76 SHPDQQPYITVWQDLVQNS------PPWIKSG 101 (105)
T ss_dssp SCTTTHHHHHHHHHHHHTC------CTTTSCC
T ss_pred CCCCcCcchHHHHHHHHCC------ChhhhcC
Confidence 9 689999999999 5566643
No 9
>d2z15a1 d.370.1.1 (A:10-126) TOB1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.46 E-value=1.3e+02 Score=29.06 Aligned_cols=44 Identities=18% Similarity=0.418 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHhhcCCcccc-hhhHH-hHHHhhhhhhc--cCCCCcHH
Q 000087 549 TIEAMVQMLARFKESSVKRE-HSIFE-CMIGNLFEEYR--FFPKYPER 592 (2284)
Q Consensus 549 sI~~iv~~L~r~K~S~~~rd-qdiFa-CMIh~LFdEYr--Ff~~YP~~ 592 (2284)
.|++.|+.|.+|-...-+|+ -++|+ .+-..|++-|+ +||+.|.+
T Consensus 4 EI~~av~Fl~~~l~~kl~~~~~~~F~~~L~~~L~~~y~~HWyp~~P~k 51 (117)
T d2z15a1 4 EIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYK 51 (117)
T ss_dssp HHHHHHHHHHTTTTTTSCHHHHHHHHHHHHHHHHHHHTTCCCTTCTTT
T ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 37889999999887775555 48895 55556667676 58888876
No 10
>d1sxjb1 a.80.1.1 (B:231-322) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=7.22 E-value=87 Score=28.52 Aligned_cols=52 Identities=12% Similarity=0.121 Sum_probs=42.5
Q ss_pred HHHHHHhCcccccCHHHHHHHHhcCCCCCHHHHHHHHHHHHhhccCCccCcc
Q 000087 99 GDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGLEDNQN 150 (2284)
Q Consensus 99 ~~~i~elG~~~t~s~~~c~~~L~~~~~l~e~~va~~l~~ma~t~~gl~~~~~ 150 (2284)
.+.+.+-||+..-=+.+..+.+.....++|..-++++..+|.++..+.++.+
T Consensus 23 ~~~l~~~Gys~~DIi~~l~~~i~~~~~~~e~~k~~il~~la~~~~rl~~G~~ 74 (92)
T d1sxjb1 23 RTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGVG 74 (92)
T ss_dssp HHTTTTTTCCHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3456778998888788888888877789999999999999999988766544
Done!