BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000092
(2267 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TDC|A Chain A, Crystal Structure Of Human Acetyl-Coa Carboxylase 2
Length = 762
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/709 (49%), Positives = 468/709 (66%), Gaps = 23/709 (3%)
Query: 1502 VNAQYQSLGVLDQKRLLARRSNTTYCYDFPLAFETALEQSWASQFPNMRPKDKALLKVTE 1561
+N Y + +L KR A+ TTY YDFP F AL + W S P+ PKD +L TE
Sbjct: 3 INTPYVTKDLLQAKRFQAQTLGTTYIYDFPEMFRQALFKLWGS--PDKYPKD--ILTYTE 58
Query: 1562 LKFADDSGTWGTPLVLVERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDVTFKAGSF 1621
L D G LV + R PG N +GMVA+ M T E+P GR ++++ ND+TF+ GSF
Sbjct: 59 LVL-DSQGQ----LVEMNRLPGGNEVGMVAFKMRFKTQEYPEGRDVIVIGNDITFRIGSF 113
Query: 1622 GPREDAFFLAVTDLACAKKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNPDRGFNYV 1681
GP ED +L +++A A+ +P IY+AANSGARIG+AEE+K F + W D +P +GF Y+
Sbjct: 114 GPGEDLLYLRASEMARAEGIPKIYVAANSGARIGMAEEIKHMFHVAWVDPEDPHKGFKYL 173
Query: 1682 YLTPEDYARIGSSVIAHEMKLE-SGETRWVVDSIVGKEDGLGVENLTGSGAIAGAYSRAY 1740
YLTP+DY RI S H +E GE+R+++ I+GK+DGLGVENL GSG IAG S AY
Sbjct: 174 YLTPQDYTRISSLNSVHCKHIEEGGESRYMITDIIGKDDGLGVENLRGSGMIAGESSLAY 233
Query: 1741 KETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGG 1800
+E T++ VT R +GIGAYL RLG R IQ + IILTG SALNK+LGREVY+S+ QLGG
Sbjct: 234 EEIVTISLVTCRAIGIGAYLVRLGQRVIQVENSHIILTGASALNKVLGREVYTSNNQLGG 293
Query: 1801 PKIMATNGVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDRPVEYLPENS- 1859
+IM NGV H+TV DD EG+ IL+WLSY+P +PII+P DP DR +E+LP +
Sbjct: 294 VQIMHYNGVSHITVPDDFEGVYTILEWLSYMPKDNHSPVPIITPTDPIDREIEFLPSRAP 353
Query: 1860 CDPRAAICG--FLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIPVGIVAVETQ 1917
DPR + G G W G FD SF E + WA+TVVTGRARLGGIPVG++AVET+
Sbjct: 354 YDPRWMLAGRPHPTLKGTWQSGFFDHGSFKEIMAPWAQTVVTGRARLGGIPVGVIAVETR 413
Query: 1918 TVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNREELPLFILANWRGFSG 1977
TV +PADP LDS +++ QAGQVWFPDSA KTAQA+ DFNRE+LPL I ANWRGFSG
Sbjct: 414 TVEVAVPADPANLDSEAKIIQQAGQVWFPDSAYKTAQAIKDFNREKLPLMIFANWRGFSG 473
Query: 1978 GQRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRINSDHIEMYADR 2037
G +D+++ +L+ G+ IV+ LR YKQP+ +YIP AELRGG+WVV+D+ IN IEMYAD+
Sbjct: 474 GMKDMYDQVLKFGAYIVDGLRQYKQPILIYIPPYAELRGGSWVVIDATINPLCIEMYADK 533
Query: 2038 TAKGNVLEPEGMIEIKFRTKELLECMGRLDQKLIDLMAKLQE---AKNNRTLAMVESLQQ 2094
++G VLEPEG +EIKFR K+L++ M R+D LM +L E + +R + L+
Sbjct: 534 ESRGGVLEPEGTVEIKFRKKDLIKSMRRIDPAYKKLMEQLGEPDLSDKDR-----KDLEG 588
Query: 2095 QIKAREKQLLPTYTQVATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXXXXXXXVAES 2154
++KARE LLP Y QVA +FA+ HDT RM KGVI ++++W + E
Sbjct: 589 RLKAREDLLLPIYHQVAVQFADFHDTPGRMLEKGVISDILEWKTARTFLYWRLRRLLLED 648
Query: 2155 SLVKTLTAAAGDYLTHKSAIEMIKQWFLDSEIARGKEGAWLDDETFFTW 2203
+ + + A+G+ L+H M+++WF+++E A K W +++ W
Sbjct: 649 QVKQEILQASGE-LSHVHIQSMLRRWFVETEGAV-KAYLWDNNQVVVQW 695
>pdb|3FF6|A Chain A, Human Acc2 Ct Domain With Cp-640186
pdb|3FF6|B Chain B, Human Acc2 Ct Domain With Cp-640186
pdb|3FF6|C Chain C, Human Acc2 Ct Domain With Cp-640186
pdb|3FF6|D Chain D, Human Acc2 Ct Domain With Cp-640186
Length = 760
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/708 (49%), Positives = 467/708 (65%), Gaps = 23/708 (3%)
Query: 1503 NAQYQSLGVLDQKRLLARRSNTTYCYDFPLAFETALEQSWASQFPNMRPKDKALLKVTEL 1562
N Y + +L KR A+ TTY YDFP F AL + W S P+ PKD +L TEL
Sbjct: 2 NTPYVTKDLLQAKRFQAQTLGTTYIYDFPEMFRQALFKLWGS--PDKYPKD--ILTYTEL 57
Query: 1563 KFADDSGTWGTPLVLVERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDVTFKAGSFG 1622
D G LV + R PG N +GMVA+ M T E+P GR ++++ ND+TF+ GSFG
Sbjct: 58 VL-DSQGQ----LVEMNRLPGGNEVGMVAFKMRFKTQEYPEGRDVIVIGNDITFRIGSFG 112
Query: 1623 PREDAFFLAVTDLACAKKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNPDRGFNYVY 1682
P ED +L +++A A+ +P IY+AANSGARIG+AEE+K F + W D +P +GF Y+Y
Sbjct: 113 PGEDLLYLRASEMARAEGIPKIYVAANSGARIGMAEEIKHMFHVAWVDPEDPHKGFKYLY 172
Query: 1683 LTPEDYARIGSSVIAHEMKLE-SGETRWVVDSIVGKEDGLGVENLTGSGAIAGAYSRAYK 1741
LTP+DY RI S H +E GE+R+++ I+GK+DGLGVENL GSG IAG S AY+
Sbjct: 173 LTPQDYTRISSLNSVHCKHIEEGGESRYMITDIIGKDDGLGVENLRGSGMIAGESSLAYE 232
Query: 1742 ETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGP 1801
E T++ VT R +GIGAYL RLG R IQ + IILTG SALNK+LGREVY+S+ QLGG
Sbjct: 233 EIVTISLVTCRAIGIGAYLVRLGQRVIQVENSHIILTGASALNKVLGREVYTSNNQLGGV 292
Query: 1802 KIMATNGVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDRPVEYLPENS-C 1860
+IM NGV H+TV DD EG+ IL+WLSY+P +PII+P DP DR +E+LP +
Sbjct: 293 QIMHYNGVSHITVPDDFEGVYTILEWLSYMPKDNHSPVPIITPTDPIDREIEFLPSRAPY 352
Query: 1861 DPRAAICG--FLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIPVGIVAVETQT 1918
DPR + G G W G FD SF E + WA+TVVTGRARLGGIPVG++AVET+T
Sbjct: 353 DPRWMLAGRPHPTLKGTWQSGFFDHGSFKEIMAPWAQTVVTGRARLGGIPVGVIAVETRT 412
Query: 1919 VMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNREELPLFILANWRGFSGG 1978
V +PADP LDS +++ QAGQVWFPDSA KTAQA+ DFNRE+LPL I ANWRGFSGG
Sbjct: 413 VEVAVPADPANLDSEAKIIQQAGQVWFPDSAYKTAQAIKDFNREKLPLMIFANWRGFSGG 472
Query: 1979 QRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRINSDHIEMYADRT 2038
+D+++ +L+ G+ IV+ LR YKQP+ +YIP AELRGG+WVV+D+ IN IEMYAD+
Sbjct: 473 MKDMYDQVLKFGAYIVDGLRQYKQPILIYIPPYAELRGGSWVVIDATINPLCIEMYADKE 532
Query: 2039 AKGNVLEPEGMIEIKFRTKELLECMGRLDQKLIDLMAKLQE---AKNNRTLAMVESLQQQ 2095
++G VLEPEG +EIKFR K+L++ M R+D LM +L E + +R + L+ +
Sbjct: 533 SRGGVLEPEGTVEIKFRKKDLIKSMRRIDPAYKKLMEQLGEPDLSDKDR-----KDLEGR 587
Query: 2096 IKAREKQLLPTYTQVATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXXXXXXXVAESS 2155
+KARE LLP Y QVA +FA+ HDT RM KGVI ++++W + E
Sbjct: 588 LKAREDLLLPIYHQVAVQFADFHDTPGRMLEKGVISDILEWKTARTFLYWRLRRLLLEDQ 647
Query: 2156 LVKTLTAAAGDYLTHKSAIEMIKQWFLDSEIARGKEGAWLDDETFFTW 2203
+ + + A+G+ L+H M+++WF+++E A K W +++ W
Sbjct: 648 VKQEILQASGE-LSHVHIQSMLRRWFVETEGAV-KAYLWDNNQVVVQW 693
>pdb|2X24|A Chain A, Bovine Acc2 Ct Domain In Complex With Inhibitor
pdb|2X24|B Chain B, Bovine Acc2 Ct Domain In Complex With Inhibitor
Length = 793
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/716 (48%), Positives = 474/716 (66%), Gaps = 23/716 (3%)
Query: 1495 GLLHGVEVNAQYQSLGVLDQKRLLARRSNTTYCYDFPLAFETALEQSWASQFPNMRPKDK 1554
G HG+ +N Y + +L KR A+ TTY YDFP F AL + W S P+ PKD
Sbjct: 20 GPQHGMLINTPYVTKDLLQAKRFQAQSLGTTYVYDFPEMFRQALFKMWPS--PDKYPKD- 76
Query: 1555 ALLKVTELKFADDSGTWGTPLVLVERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDV 1614
+L TEL D G LV + R PG N +GMVA+ M + T E+P GR I++++ND+
Sbjct: 77 -ILTYTELVL-DPQGQ----LVEMNRLPGGNEVGMVAFKMTLKTLEYPEGRDIILISNDI 130
Query: 1615 TFKAGSFGPREDAFFLAVTDLACAKKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNP 1674
TF+ GSFGP ED +L ++LA A+ +P +YLAANSGARIG+AEE+K F++ W D +P
Sbjct: 131 TFRIGSFGPGEDLLYLRASELARAEGIPRVYLAANSGARIGLAEEIKHMFQVAWVDPEDP 190
Query: 1675 DRGFNYVYLTPEDYARIGSSVIAHEMKLE-SGETRWVVDSIVGKEDGLGVENLTGSGAIA 1733
+G Y+YLTP+DY RI S H +E GE+R+V+ I+GKE+GLGVENL GSG IA
Sbjct: 191 HKGIKYLYLTPQDYTRISSLNSVHCKHVEEDGESRYVITDIIGKEEGLGVENLRGSGMIA 250
Query: 1734 GAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYS 1793
G S+ Y E T++ V+ R +GIGAYL RLG R IQ + IILTG +ALNK+LGR+VY+
Sbjct: 251 GETSQDYDEIVTISMVSCRALGIGAYLVRLGQRVIQVENSHIILTGATALNKVLGRDVYT 310
Query: 1794 SHMQLGGPKIMATNGVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDRPVE 1853
S+ QLGG +IM NGV H+TV DD EG+ IL+WLSY+P +P+++P DP DR +E
Sbjct: 311 SNNQLGGVQIMHHNGVSHVTVPDDFEGVCTILEWLSYMPKDNRSPVPVVTPKDPIDREIE 370
Query: 1854 YLPENS-CDPRAAICG--FLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIPVG 1910
+ P DPR + G G W G FD+ SF E + WA+TVVTGRARLGGIPVG
Sbjct: 371 FQPSRGPYDPRWLLAGRPHPTLKGSWQSGFFDQGSFKEIMVPWAQTVVTGRARLGGIPVG 430
Query: 1911 IVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNREELPLFILA 1970
++A ET+TV V+PADP LDS +++ QAGQVWFPDSA KTAQA+ DFNRE+LPL I A
Sbjct: 431 VIAAETRTVELVVPADPANLDSEAKIIQQAGQVWFPDSAYKTAQAIKDFNREKLPLMIFA 490
Query: 1971 NWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRINSDH 2030
NWRGFSGG +D+++ +L+ G+ IV+ LR Y+QPV +YIP AE+RGG+W V+D+ IN
Sbjct: 491 NWRGFSGGMKDMYDQVLKFGAYIVDGLRKYRQPVLIYIPPYAEVRGGSWAVMDTSINPLC 550
Query: 2031 IEMYADRTAKGNVLEPEGMIEIKFRTKELLECMGRLD---QKLIDLMAKLQEAKNNRTLA 2087
IEMYADR ++ +VLEPEG +EIK++ K+L++ + RLD +KL++ + + + +R
Sbjct: 551 IEMYADRESRASVLEPEGTVEIKYQKKDLVKTIRRLDPISKKLVEQLGVSELSDTDR--- 607
Query: 2088 MVESLQQQIKAREKQLLPTYTQVATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXXXX 2147
+ L+ Q+KARE LLP Y QVA FA+LHDT+ RM KGVI ++++W
Sbjct: 608 --KELEGQLKAREDLLLPMYHQVALHFADLHDTAGRMLEKGVIYDILEWKTARSFLYWRL 665
Query: 2148 XXXVAESSLVKTLTAAAGDYLTHKSAIEMIKQWFLDSEIARGKEGAWLDDETFFTW 2203
+ ES + + + A + L+H M+++WF+++E A K W +++T W
Sbjct: 666 RRLLLESQVKQEVLRACPE-LSHMHVQSMLRRWFVETEGAV-KAYLWDNNQTVVQW 719
>pdb|4ASI|A Chain A, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|B Chain B, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|C Chain C, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|D Chain D, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|E Chain E, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|F Chain F, Crystal Structure Of Human Acaca C-Terminal Domain
Length = 769
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/730 (46%), Positives = 464/730 (63%), Gaps = 22/730 (3%)
Query: 1502 VNAQYQSLGVLDQKRLLARRSNTTYCYDFPLAFETALEQSWASQ----FPNMRPKDKALL 1557
+N Y + +L KR A+ TTY YD P F +L + W S F P +L
Sbjct: 4 INTPYVTKDLLQSKRFQAQSLGTTYIYDIPEMFRQSLIKLWESMSTQAFLPSPPLPSDML 63
Query: 1558 KVTELKFADDSGTWGTPLVLVERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDVTFK 1617
TEL DD G LV + R PG N IGMVAW M +PE+P GR I+++ ND+T++
Sbjct: 64 TYTELVL-DDQGQ----LVHMNRLPGGNEIGMVAWKMTFKSPEYPEGRDIIVIGNDITYR 118
Query: 1618 AGSFGPREDAFFLAVTDLACAKKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNPDRG 1677
GSFGP+ED FL ++LA A+ +P IY++ANSGARIG+AEE++ F + W D +P +G
Sbjct: 119 IGSFGPQEDLLFLRASELARAEGIPRIYVSANSGARIGLAEEIRHMFHVAWVDPEDPYKG 178
Query: 1678 FNYVYLTPEDYARIGSSVIAHEMKLES-GETRWVVDSIVGKEDGLGVENLTGSGAIAGAY 1736
+ Y+YLTP+DY R+ + H +E GE+R+ + I+GKE+G+G ENL GSG IAG
Sbjct: 179 YRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLRGSGMIAGES 238
Query: 1737 SRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHM 1796
S AY E T++ VT R +GIGAYL RLG R IQ + +ILTG ALNK+LGREVY+S+
Sbjct: 239 SLAYNEIITISLVTCRAIGIGAYLVRLGQRTIQVENSHLILTGAGALNKVLGREVYTSNN 298
Query: 1797 QLGGPKIMATNGVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDRPVEYLP 1856
QLGG +IM NGV H TV DD EG+ +L WLSY+P + ++P+++ DP DR +E++P
Sbjct: 299 QLGGIQIMHNNGVTHCTVCDDFEGVFTVLHWLSYMPKSVHSSVPLLNSKDPIDRIIEFVP 358
Query: 1857 ENS-CDPRAAICG--FLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIPVGIVA 1913
+ DPR + G G+W+ G FD SF E ++ WA+TVV GRARLGGIPVG+VA
Sbjct: 359 TKTPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPWAQTVVVGRARLGGIPVGVVA 418
Query: 1914 VETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNREELPLFILANWR 1973
VET+TV IPADP LDS +++ QAGQVWFPDSA KT QA+ DFNRE LPL + ANWR
Sbjct: 419 VETRTVELSIPADPANLDSEAKIIQQAGQVWFPDSAFKTYQAIKDFNREGLPLMVFANWR 478
Query: 1974 GFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRINSDHIEM 2033
GFSGG +D+++ +L+ G+ IV+ LR QPV VYIP AELRGG+WVV+DS IN H+EM
Sbjct: 479 GFSGGMKDMYDQVLKFGAYIVDGLRECCQPVLVYIPPQAELRGGSWVVIDSSINPRHMEM 538
Query: 2034 YADRTAKGNVLEPEGMIEIKFRTKELLECMGRLDQKLIDLMAKLQEAKNNRTLAMVESLQ 2093
YADR ++G+VLEPEG +EIKFR K+L++ M R+D I L +L + A + L+
Sbjct: 539 YADRESRGSVLEPEGTVEIKFRRKDLVKTMRRVDPVYIHLAERL--GTPELSTAERKELE 596
Query: 2094 QQIKAREKQLLPTYTQVATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXXXXXXXVAE 2153
++K RE+ L+P Y QVA +FA+LHDT RM KGVI +++DW K +
Sbjct: 597 NKLKEREEFLIPIYHQVAVQFADLHDTPGRMQEKGVISDILDW-KTSRTFFYWRLRRLLL 655
Query: 2154 SSLVKTLTAAAGDYLTHKSAIEMIKQWFLDSEIARGKEGAWLDDETFFTWKDDSRNYEKK 2213
LVK A LT M+++WF++ E K W +++ W + ++
Sbjct: 656 EDLVKKKIHNANPELTDGQIQAMLRRWFVEVE-GTVKAYVWDNNKDLAEWLE-----KQL 709
Query: 2214 VQELGVQKVL 2223
+E GV V+
Sbjct: 710 TEEDGVHSVI 719
>pdb|3TV5|A Chain A, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 1
pdb|3TV5|B Chain B, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 1
pdb|3TV5|C Chain C, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 1
pdb|3TVU|A Chain A, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 3
pdb|3TVU|B Chain B, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 3
pdb|3TVU|C Chain C, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 3
pdb|3TVW|A Chain A, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 4
pdb|3TVW|B Chain B, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 4
pdb|3TVW|C Chain C, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 4
pdb|3TZ3|A Chain A, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 2
pdb|3TZ3|B Chain B, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 2
pdb|3TZ3|C Chain C, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 2
Length = 769
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/696 (49%), Positives = 455/696 (65%), Gaps = 21/696 (3%)
Query: 1495 GLLHGVEVNAQYQSLGVLDQKRLLARRSNTTYCYDFPLAFETALEQSWASQFPNMRPKDK 1554
G +H + Y L KR A TTY YDFP F A W + +++ D
Sbjct: 4 GSMHLRPIATPYPVKEWLQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDD 63
Query: 1555 ALLKVTELKFADDSGTWGTPLVLVERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDV 1614
+ EL D++G L VER PG N IGMVA+ + + TPE+P GR ++VAND+
Sbjct: 64 FFIS-NEL-IEDENGE----LTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDI 117
Query: 1615 TFKAGSFGPREDAFFLAVTDLACAKKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNP 1674
TFK GSFGP+ED FF VT+ A + +P IYLAANSGARIG+AEE+ F++ W D NP
Sbjct: 118 TFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANP 177
Query: 1675 DRGFNYVYLTPEDYARIGS----SVIAHEMKLESGETRWVVDSIVGKEDGLGVENLTGSG 1730
D+GF Y+YLT E + + + E + +GE R+V+ +I+G EDGLGVE L GSG
Sbjct: 178 DKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSG 237
Query: 1731 AIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGRE 1790
IAGA SRAY + FT+T VT R+VGIGAYL RLG R IQ QPIILTG SALNK+LGRE
Sbjct: 238 LIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGASALNKVLGRE 297
Query: 1791 VYSSHMQLGGPKIMATNGVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDR 1850
VY+S++QLGG +IM NGV HLT DDL G+ I++W+SYVP +PI+ D DR
Sbjct: 298 VYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDR 357
Query: 1851 PVEYLPEN--SCDPRAAICGFLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIP 1908
PV++ P N + D R I G +G + G+FDK SF ETL GWA+ VV GRARLGGIP
Sbjct: 358 PVDFTPTNDETYDVRWMIEGRETESG-FEYGLFDKGSFFETLSGWAKGVVVGRARLGGIP 416
Query: 1909 VGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNR-EELPLF 1967
+G++ VET+TV +IPADP +S E ++ QAGQVWFP+SA KTAQA+ DFN E+LP+
Sbjct: 417 LGVIGVETRTVENLIPADPANPNSAETLIQQAGQVWFPNSAFKTAQAINDFNNGEQLPMM 476
Query: 1968 ILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRIN 2027
ILANWRGFSGGQRD+F +L+ GS IV+ L YKQP+ +YIP ELRGG+WVVVD IN
Sbjct: 477 ILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTIN 536
Query: 2028 SDHIEMYADRTAKGNVLEPEGMIEIKFRTKELLECMGRLDQKLIDLMAKLQEAKNNRTLA 2087
+D +EMYAD A+ VLEPEG +EIKFR ++LL+ M RLD K +L ++L +N++LA
Sbjct: 537 ADQMEMYADVNARAGVLEPEGTVEIKFRREKLLDTMNRLDDKYRELRSQL----SNKSLA 592
Query: 2088 --MVESLQQQIKAREKQLLPTYTQVATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXX 2145
+ + + +Q+ RE++LLP Y Q++ +FA+LHD S RM AKGVI + ++W +
Sbjct: 593 PEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFW 652
Query: 2146 XXXXXVAESSLVKTLTAAAGDYLTHKSAIEMIKQWF 2181
+ E L+K L+ G+ + I I+ W+
Sbjct: 653 RLRRRLNEEYLIKRLSHQVGE-ASRLEKIARIRSWY 687
>pdb|1W2X|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Cp-640186
pdb|1W2X|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Cp-640186
pdb|1W2X|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Cp-640186
pdb|3K8X|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With
Tepraloxydim
pdb|3K8X|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With
Tepraloxydim
pdb|3K8X|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With
Tepraloxydim
Length = 758
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/778 (45%), Positives = 484/778 (62%), Gaps = 37/778 (4%)
Query: 1495 GLLHGVEVNAQYQSLGVLDQKRLLARRSNTTYCYDFPLAFETALEQSWASQFPNMRPKDK 1554
G +H + Y L KR A TTY YDFP F A W + +++ D
Sbjct: 1 GSMHLRPIATPYPVKEWLQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDD 60
Query: 1555 ALLKVTELKFADDSGTWGTPLVLVERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDV 1614
+ EL D++G L VER PG N IGMVA+ + + TPE+P GR ++VAND+
Sbjct: 61 FFIS-NEL-IEDENGE----LTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDI 114
Query: 1615 TFKAGSFGPREDAFFLAVTDLACAKKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNP 1674
TFK GSFGP+ED FF VT+ A + +P IYLAANSGARIG+AEE+ F++ W D NP
Sbjct: 115 TFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANP 174
Query: 1675 DRGFNYVYLTPEDYARIGS----SVIAHEMKLESGETRWVVDSIVGKEDGLGVENLTGSG 1730
D+GF Y+YLT E + + + E + +GE R+V+ +I+G EDGLGVE L GSG
Sbjct: 175 DKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSG 234
Query: 1731 AIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGRE 1790
IAGA SRAY + FT+T VT R+VGIGAYL RLG R IQ QPIILTG A+NK+LGRE
Sbjct: 235 LIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGRE 294
Query: 1791 VYSSHMQLGGPKIMATNGVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDR 1850
VY+S++QLGG +IM NGV HLT DDL G+ I++W+SYVP +PI+ D DR
Sbjct: 295 VYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDR 354
Query: 1851 PVEYLPEN--SCDPRAAICGFLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIP 1908
PV++ P N + D R I G +G + G+FDK SF ETL GWA+ VV GRARLGGIP
Sbjct: 355 PVDFTPTNDETYDVRWMIEGRETESG-FEYGLFDKGSFFETLSGWAKGVVVGRARLGGIP 413
Query: 1909 VGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNR-EELPLF 1967
+G++ VET+TV +IPADP +S E ++ + GQVW P+SA KTAQA+ DFN E+LP+
Sbjct: 414 LGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMM 473
Query: 1968 ILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRIN 2027
ILANWRGFSGGQRD+F +L+ GS IV+ L YKQP+ +YIP ELRGG+WVVVD IN
Sbjct: 474 ILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTIN 533
Query: 2028 SDHIEMYADRTAKGNVLEPEGMIEIKFRTKELLECMGRLDQKLIDLMAKLQEAKNNRTLA 2087
+D +EMYAD A+ VLEP+GM+ IKFR ++LL+ M RLD K +L ++L +N++LA
Sbjct: 534 ADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYRELRSQL----SNKSLA 589
Query: 2088 --MVESLQQQIKAREKQLLPTYTQVATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXX 2145
+ + + +Q+ RE++LLP Y Q++ +FA+LHD S RM AKGVI + ++W +
Sbjct: 590 PEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFW 649
Query: 2146 XXXXXVAESSLVKTLTAAAGDYLTHKSAIEMIKQWF---LDSEIARGKEGAWLDDETFFT 2202
+ E L+K L+ G+ + I I+ W+ +D E DD T
Sbjct: 650 RLRRRLNEEYLIKRLSHQVGE-ASRLEKIARIRSWYPASVDHE----------DDRQVAT 698
Query: 2203 W-KDDSRNYEKKVQELGVQKVLLQLTNIGNSTSDLQALPQGLATLLSKVDPSCREQLI 2259
W +++ + + K++ L ++ L SD GL+ ++ + +E+L+
Sbjct: 699 WIEENYKTLDDKLKGLKLESFAQDLAK--KIRSDHDNAIDGLSEVIKMLSTDDKEKLL 754
>pdb|3H0J|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 2
pdb|3H0J|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 2
pdb|3H0J|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 2
pdb|3H0S|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 7
pdb|3H0S|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 7
pdb|3H0S|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 7
pdb|3H0Q|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 3
pdb|3H0Q|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 3
pdb|3H0Q|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 3
Length = 769
Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/696 (48%), Positives = 452/696 (64%), Gaps = 21/696 (3%)
Query: 1495 GLLHGVEVNAQYQSLGVLDQKRLLARRSNTTYCYDFPLAFETALEQSWASQFPNMRPKDK 1554
G +H + Y L KR A TTY YDFP F A W + +++ D
Sbjct: 4 GSMHLRPIATPYPVKEWLQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDD 63
Query: 1555 ALLKVTELKFADDSGTWGTPLVLVERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDV 1614
+ EL D++G L VER PG N IGMVA+ + + TPE+P GR ++VAND+
Sbjct: 64 FFIS-NEL-IEDENGE----LTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDI 117
Query: 1615 TFKAGSFGPREDAFFLAVTDLACAKKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNP 1674
TFK GSFGP+ED FF VT+ A + +P IYLAANSGARIG+AEE+ F++ W D NP
Sbjct: 118 TFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANP 177
Query: 1675 DRGFNYVYLTPEDYARIGS----SVIAHEMKLESGETRWVVDSIVGKEDGLGVENLTGSG 1730
D+GF Y+YLT E + + + E + +GE R+V+ +I+G EDGLGVE L GSG
Sbjct: 178 DKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSG 237
Query: 1731 AIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGRE 1790
IAGA SRAY + FT+T VT R+VGIGAYL RLG R IQ QPIILTG A+NK+LGRE
Sbjct: 238 LIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGRE 297
Query: 1791 VYSSHMQLGGPKIMATNGVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDR 1850
VY+S++QLGG +IM NGV HLT DDL G+ I++W+SYVP +PI+ D DR
Sbjct: 298 VYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDR 357
Query: 1851 PVEYLPEN--SCDPRAAICGFLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIP 1908
PV++ P N + D R I G +G + G+FDK SF ETL GWA+ VV GRARLGGIP
Sbjct: 358 PVDFTPTNDETYDVRWMIEGRETESG-FEYGLFDKGSFFETLSGWAKGVVVGRARLGGIP 416
Query: 1909 VGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNR-EELPLF 1967
+G++ VET+TV +IPADP +S E ++ + GQVW P+SA KTAQA+ DFN E+LP+
Sbjct: 417 LGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMM 476
Query: 1968 ILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRIN 2027
ILANWRGFSGGQRD+F +L+ GS IV+ L YKQP+ +YIP ELRGG+WVVVD IN
Sbjct: 477 ILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTIN 536
Query: 2028 SDHIEMYADRTAKGNVLEPEGMIEIKFRTKELLECMGRLDQKLIDLMAKLQEAKNNRTLA 2087
+D +EMYAD A+ VLEP+GM+ IKFR ++LL+ M RLD K +L ++L +N++LA
Sbjct: 537 ADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYRELRSQL----SNKSLA 592
Query: 2088 --MVESLQQQIKAREKQLLPTYTQVATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXX 2145
+ + + +Q+ RE++LLP Y Q++ +FA+LHD S RM AKGVI + ++W +
Sbjct: 593 PEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFW 652
Query: 2146 XXXXXVAESSLVKTLTAAAGDYLTHKSAIEMIKQWF 2181
+ E L+K L+ G+ + I I+ W+
Sbjct: 653 RLRRRLNEEYLIKRLSHQVGE-ASRLEKIARIRSWY 687
>pdb|3PGQ|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of S.
Cerevisiae Acetyl Coa Carboxylase In Complex With
Pinoxaden
pdb|3PGQ|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of S.
Cerevisiae Acetyl Coa Carboxylase In Complex With
Pinoxaden
pdb|3PGQ|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of S.
Cerevisiae Acetyl Coa Carboxylase In Complex With
Pinoxaden
Length = 764
Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/696 (48%), Positives = 452/696 (64%), Gaps = 21/696 (3%)
Query: 1495 GLLHGVEVNAQYQSLGVLDQKRLLARRSNTTYCYDFPLAFETALEQSWASQFPNMRPKDK 1554
G +H + Y L KR A TTY YDFP F A W + +++ D
Sbjct: 1 GSMHLRPIATPYPVKEWLQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDD 60
Query: 1555 ALLKVTELKFADDSGTWGTPLVLVERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDV 1614
+ EL D++G L VER PG N IGMVA+ + + TPE+P GR ++VAND+
Sbjct: 61 FFIS-NEL-IEDENGE----LTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDI 114
Query: 1615 TFKAGSFGPREDAFFLAVTDLACAKKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNP 1674
TFK GSFGP+ED FF VT+ A + +P IYLAANSGARIG+AEE+ F++ W D NP
Sbjct: 115 TFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANP 174
Query: 1675 DRGFNYVYLTPEDYARIGS----SVIAHEMKLESGETRWVVDSIVGKEDGLGVENLTGSG 1730
D+GF Y+YLT E + + + E + +GE R+V+ +I+G EDGLGVE L GSG
Sbjct: 175 DKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSG 234
Query: 1731 AIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGRE 1790
IAGA SRAY + FT+T VT R+VGIGAYL RLG R IQ QPIILTG A+NK+LGRE
Sbjct: 235 LIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGRE 294
Query: 1791 VYSSHMQLGGPKIMATNGVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDR 1850
VY+S++QLGG +IM NGV HLT DDL G+ I++W+SYVP +PI+ D DR
Sbjct: 295 VYTSNLQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDR 354
Query: 1851 PVEYLPEN--SCDPRAAICGFLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIP 1908
PV++ P N + D R I G +G + G+FDK SF ETL GWA+ VV GRARLGGIP
Sbjct: 355 PVDFTPTNDETYDVRWMIEGRETESG-FEYGLFDKGSFFETLSGWAKGVVVGRARLGGIP 413
Query: 1909 VGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNR-EELPLF 1967
+G++ VET+TV +IPADP +S E ++ + GQVW P+SA KTAQA+ DFN E+LP+
Sbjct: 414 LGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMM 473
Query: 1968 ILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRIN 2027
ILANWRGFSGGQRD+F +L+ GS IV+ L YKQP+ +YIP ELRGG+WVVVD IN
Sbjct: 474 ILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTIN 533
Query: 2028 SDHIEMYADRTAKGNVLEPEGMIEIKFRTKELLECMGRLDQKLIDLMAKLQEAKNNRTLA 2087
+D +EMYAD A+ VLEP+GM+ IKFR ++LL+ M RLD K +L ++L +N++LA
Sbjct: 534 ADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYRELRSQL----SNKSLA 589
Query: 2088 --MVESLQQQIKAREKQLLPTYTQVATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXX 2145
+ + + +Q+ RE++LLP Y Q++ +FA+LHD S RM AKGVI + ++W +
Sbjct: 590 PEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFW 649
Query: 2146 XXXXXVAESSLVKTLTAAAGDYLTHKSAIEMIKQWF 2181
+ E L+K L+ G+ + I I+ W+
Sbjct: 650 RLRRRLNEEYLIKRLSHQVGE-ASRLEKIARIRSWY 684
>pdb|1UYR|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain In Complex
With Inhibitor Diclofop
pdb|1UYR|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain In Complex
With Inhibitor Diclofop
pdb|1UYT|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1UYT|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1UYT|C Chain C, Acetyl-Coa Carboxylase Carboxyltransferase Domain
Length = 737
Score = 636 bits (1641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/679 (49%), Positives = 447/679 (65%), Gaps = 21/679 (3%)
Query: 1512 LDQKRLLARRSNTTYCYDFPLAFETALEQSWASQFPNMRPKDKALLKVTELKFADDSGTW 1571
L KR A TTY YDFP F A W + +++ D + EL D++G
Sbjct: 12 LQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFIS-NEL-IEDENGE- 68
Query: 1572 GTPLVLVERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDVTFKAGSFGPREDAFFLA 1631
L VER PG N IGMVA+ + + TPE+P GR ++VAND+TFK GSFGP+ED FF
Sbjct: 69 ---LTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNK 125
Query: 1632 VTDLACAKKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNPDRGFNYVYLTPEDYARI 1691
VT+ A + +P IYLAANSGARIG+AEE+ F++ W D NPD+GF Y+YLT E +
Sbjct: 126 VTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETL 185
Query: 1692 GS----SVIAHEMKLESGETRWVVDSIVGKEDGLGVENLTGSGAIAGAYSRAYKETFTLT 1747
+ + E + +GE R+V+ +I+G EDGLGVE L GSG IAGA SRAY + FT+T
Sbjct: 186 KKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTIT 245
Query: 1748 YVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATN 1807
VT R+VGIGAYL RLG R IQ QPIILTG A+NK+LGREVY+S++QLGG +IM N
Sbjct: 246 LVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGREVYTSNLQLGGTQIMYNN 305
Query: 1808 GVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDRPVEYLPEN--SCDPRAA 1865
GV HLT DDL G+ I++W+SYVP +PI+ D DRPV++ P N + D R
Sbjct: 306 GVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWM 365
Query: 1866 ICGFLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPA 1925
I G +G + G+FDK SF ETL GWA+ VV GRARLGGIP+G++ VET+TV +IPA
Sbjct: 366 IEGRETESG-FEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPA 424
Query: 1926 DPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNR-EELPLFILANWRGFSGGQRDLFE 1984
DP +S E ++ + GQVW P+SA KTAQA+ DFN E+LP+ ILANWRGFSGGQRD+F
Sbjct: 425 DPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFN 484
Query: 1985 GILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRINSDHIEMYADRTAKGNVL 2044
+L+ GS IV+ L YKQP+ +YIP ELRGG+WVVVD IN+D +EMYAD A+ VL
Sbjct: 485 EVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVL 544
Query: 2045 EPEGMIEIKFRTKELLECMGRLDQKLIDLMAKLQEAKNNRTLA--MVESLQQQIKAREKQ 2102
EP+GM+ IKFR ++LL+ M RLD K +L ++L +N++LA + + + +Q+ RE++
Sbjct: 545 EPQGMVGIKFRREKLLDTMNRLDDKYRELRSQL----SNKSLAPEVHQQISKQLADRERE 600
Query: 2103 LLPTYTQVATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXXXXXXXVAESSLVKTLTA 2162
LLP Y Q++ +FA+LHD S RM AKGVI + ++W + + E L+K L+
Sbjct: 601 LLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSH 660
Query: 2163 AAGDYLTHKSAIEMIKQWF 2181
G+ + I I+ W+
Sbjct: 661 QVGE-ASRLEKIARIRSWY 678
>pdb|1UYV|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain L1705i
V1967i Mutant
pdb|1UYV|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain L1705i
V1967i Mutant
pdb|1UYV|C Chain C, Acetyl-Coa Carboxylase Carboxyltransferase Domain L1705i
V1967i Mutant
Length = 737
Score = 635 bits (1639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/679 (49%), Positives = 447/679 (65%), Gaps = 21/679 (3%)
Query: 1512 LDQKRLLARRSNTTYCYDFPLAFETALEQSWASQFPNMRPKDKALLKVTELKFADDSGTW 1571
L KR A TTY YDFP F A W + +++ D + EL D++G
Sbjct: 12 LQPKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFIS-NEL-IEDENGE- 68
Query: 1572 GTPLVLVERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDVTFKAGSFGPREDAFFLA 1631
L VER PG N IGMVA+ + + TPE+P GR ++VAND+TFK GSFGP+ED FF
Sbjct: 69 ---LTEVEREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNK 125
Query: 1632 VTDLACAKKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNPDRGFNYVYLTPEDYARI 1691
VT+ A + +P IYLAANSGARIG+AEE+ F++ W D NPD+GF Y+YLT E +
Sbjct: 126 VTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETL 185
Query: 1692 GS----SVIAHEMKLESGETRWVVDSIVGKEDGLGVENLTGSGAIAGAYSRAYKETFTLT 1747
+ + E + +GE R+V+ +I+G EDGLGVE + GSG IAGA SRAY + FT+T
Sbjct: 186 KKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECIRGSGLIAGATSRAYHDIFTIT 245
Query: 1748 YVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATN 1807
VT R+VGIGAYL RLG R IQ QPIILTG A+NK+LGREVY+S++QLGG +IM N
Sbjct: 246 LVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGREVYTSNLQLGGTQIMYNN 305
Query: 1808 GVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDRPVEYLPEN--SCDPRAA 1865
GV HLT DDL G+ I++W+SYVP +PI+ D DRPV++ P N + D R
Sbjct: 306 GVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWM 365
Query: 1866 ICGFLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPA 1925
I G +G + G+FDK SF ETL GWA+ VV GRARLGGIP+G++ VET+TV +IPA
Sbjct: 366 IEGRETESG-FEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPA 424
Query: 1926 DPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNR-EELPLFILANWRGFSGGQRDLFE 1984
DP +S E ++ + GQVW P+SA KTAQA+ DFN E+LP+ ILANWRGFSGGQRD+F
Sbjct: 425 DPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFN 484
Query: 1985 GILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRINSDHIEMYADRTAKGNVL 2044
IL+ GS IV+ L YKQP+ +YIP ELRGG+WVVVD IN+D +EMYAD A+ VL
Sbjct: 485 EILKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVL 544
Query: 2045 EPEGMIEIKFRTKELLECMGRLDQKLIDLMAKLQEAKNNRTLA--MVESLQQQIKAREKQ 2102
EP+GM+ IKFR ++LL+ M RLD K +L ++L +N++LA + + + +Q+ RE++
Sbjct: 545 EPQGMVGIKFRREKLLDTMNRLDDKYRELRSQL----SNKSLAPEVHQQISKQLADRERE 600
Query: 2103 LLPTYTQVATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXXXXXXXVAESSLVKTLTA 2162
LLP Y Q++ +FA+LHD S RM AKGVI + ++W + + E L+K L+
Sbjct: 601 LLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSH 660
Query: 2163 AAGDYLTHKSAIEMIKQWF 2181
G+ + I I+ W+
Sbjct: 661 QVGE-ASRLEKIARIRSWY 678
>pdb|1OD2|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1OD2|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1OD4|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1OD4|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1OD4|C Chain C, Acetyl-Coa Carboxylase Carboxyltransferase Domain
Length = 805
Score = 631 bits (1628), Expect = e-180, Method: Compositional matrix adjust.
Identities = 357/814 (43%), Positives = 490/814 (60%), Gaps = 38/814 (4%)
Query: 1459 RVVVTNVTGHTCAVYIYRELEDTSKHTVVYHSVAVRGLLHGVEVNAQYQSLGVLDQKRLL 1518
R ++ NV+G+ Y E+++ +K V+ S+ G H + Y L KR
Sbjct: 13 RALINNVSGYVIKTEXYTEVKN-AKGEWVFKSLGKPGSXHLRPIATPYPVKEWLQPKRYK 71
Query: 1519 ARRSNTTYCYDFPLAFETALEQSWASQFPNMRPKDKALLKVTELKFADDSGTWGTPLVLV 1578
A TTY YDFP F A W + +++ D + EL D++G L V
Sbjct: 72 AHLXGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFIS-NEL-IEDENGE----LTEV 125
Query: 1579 ERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDVTFKAGSFGPREDAFFLAVTDLACA 1638
ER PG N IG VA+ + + TPE+P GR ++VAND+TFK GSFGP+ED FF VT+ A
Sbjct: 126 EREPGANAIGXVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARK 185
Query: 1639 KKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNPDRGFNYVYLTPEDYARIGS----S 1694
+ +P IYLAANSGARIG AEE+ F++ W D NPD+GF Y+YLT E + +
Sbjct: 186 RGIPRIYLAANSGARIGXAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGXETLKKFDKEN 245
Query: 1695 VIAHEMKLESGETRWVVDSIVGKEDGLGVENLTGSGAIAGAYSRAYKETFTLTYVTGRTV 1754
+ E + +GE R+V+ +I+G EDGLGVE L GSG IAGA SRAY + FT+T VT R+V
Sbjct: 246 SVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSV 305
Query: 1755 GIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTV 1814
GIGAYL RLG R IQ QPIILTG A+NK LGREVY+S++QLGG +I NGV HLT
Sbjct: 306 GIGAYLVRLGQRAIQVEGQPIILTGAPAINKXLGREVYTSNLQLGGTQIXYNNGVSHLTA 365
Query: 1815 SDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDRPVEYLPEN--SCDPRAAICGFLDN 1872
DDL G+ I++W SYVP +PI+ D DRPV++ P N + D R I G
Sbjct: 366 VDDLAGVEKIVEWXSYVPAKRNXPVPILETKDTWDRPVDFTPTNDETYDVRWXIEGRETE 425
Query: 1873 NGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDS 1932
+G + G+FDK SF ETL GWA+ VV GRARLGGIP+G++ VET+TV +IPADP +S
Sbjct: 426 SG-FEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNS 484
Query: 1933 HERVVPQAGQVWFPDSATKTAQALMDFNR-EELPLFILANWRGFSGGQRDLFEGILQAGS 1991
E ++ + GQVW P+SA KTAQA+ DFN E+LP ILANWRGFSGGQRD F +L+ GS
Sbjct: 485 AETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPXXILANWRGFSGGQRDXFNEVLKYGS 544
Query: 1992 TIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRINSDHIEMYADRTAKGNVLEPEGMIE 2051
IV+ L YKQP+ +YIP ELRGG+WVVVD IN+D E YAD A+ VLEP+G +
Sbjct: 545 FIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQXEXYADVNARAGVLEPQGXVG 604
Query: 2052 IKFRTKELLECMGRLDQKLIDLMAKLQEAKNNRTLA--MVESLQQQIKAREKQLLPTYTQ 2109
IKFR ++LL+ RLD K +L ++L +N++LA + + + +Q+ RE++LLP Y Q
Sbjct: 605 IKFRREKLLDTXNRLDDKYRELRSQL----SNKSLAPEVHQQISKQLADRERELLPIYGQ 660
Query: 2110 VATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXXXXXXXVAESSLVKTLTAAAGDYLT 2169
++ +FA+LHD S R AKGVI + ++W + + E L+K L+ G+ +
Sbjct: 661 ISLQFADLHDRSSRXVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSHQVGE-AS 719
Query: 2170 HKSAIEMIKQWF---LDSEIARGKEGAWLDDETFFTW-KDDSRNYEKKVQELGVQKVLLQ 2225
I I+ W+ +D E DD TW +++ + + K++ L ++
Sbjct: 720 RLEKIARIRSWYPASVDHE----------DDRQVATWIEENYKTLDDKLKGLKLESFAQD 769
Query: 2226 LTNIGNSTSDLQALPQGLATLLSKVDPSCREQLI 2259
L SD GL+ ++ + +E+L+
Sbjct: 770 LAK--KIRSDHDNAIDGLSEVIKXLSTDDKEKLL 801
>pdb|1W96|A Chain A, Crystal Structure Of Biotin Carboxylase Domain Of Acetyl-
Coenzyme A Carboxylase From Saccharomyces Cerevisiae In
Complex With Soraphen A
pdb|1W96|B Chain B, Crystal Structure Of Biotin Carboxylase Domain Of Acetyl-
Coenzyme A Carboxylase From Saccharomyces Cerevisiae In
Complex With Soraphen A
pdb|1W96|C Chain C, Crystal Structure Of Biotin Carboxylase Domain Of Acetyl-
Coenzyme A Carboxylase From Saccharomyces Cerevisiae In
Complex With Soraphen A
Length = 554
Score = 626 bits (1614), Expect = e-179, Method: Compositional matrix adjust.
Identities = 296/532 (55%), Positives = 384/532 (72%), Gaps = 20/532 (3%)
Query: 33 SEVDEFCRSLGGKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDM 92
S + +F +S GG I ILIANNG+AAVK IRS+R WAYETFG ++ + VAMATPED+
Sbjct: 32 SPLRDFVKSHGGHTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDL 91
Query: 93 RINAEHIRIADQFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTL 152
NAE+IR+ADQ++EVPGGTNNNNYANV LIV++AE VDAVW GWGHASE P LP+ L
Sbjct: 92 EANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIAERADVDAVWAGWGHASENPLLPEKL 151
Query: 153 S--TKGIIFLGPPATSMAALGDKIGSSLIAQAANVPTLPWSGS---HVKIPPESCLVTIP 207
S + +IF+GPP +M +LGDKI S+++AQ+A VP +PWSG+ V + ++ LV++
Sbjct: 152 SQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVSVD 211
Query: 208 DDVYRQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVP 267
DD+Y++ C + E+ + + +G+P MIKAS GGGGKGIR+V +++ AL+ Q E+P
Sbjct: 212 DDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIP 271
Query: 268 GSPIFIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVK 327
GSPIFIMK+A ++RHLEVQLL DQYG +L RDCSVQRRHQKIIEE P+T+A ET
Sbjct: 272 GSPIFIMKLAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFH 331
Query: 328 KLEQAARRLAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQ 387
++E+AA RL K V YV A TVEYLYS + G++YFLELNPRLQVEHP TE ++ +NLPAAQ
Sbjct: 332 EMEKAAVRLGKLVGYVSAGTVEYLYSHDDGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQ 391
Query: 388 VAVGMGIPLWQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTR------PKGHC 441
+ + MGIP+ +I +IR YGM S F+F ++T+ PKGHC
Sbjct: 392 LQIAMGIPMHRISDIRTLYGM---------NPHSASEIDFEFKTQDATKKQRRPIPKGHC 442
Query: 442 VAVRVTSEDPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGE 501
A R+TSEDP+DGFKP+ G + EL+F+S NVW YFSV + G IH FSDSQFGH+FAFGE
Sbjct: 443 TACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGE 502
Query: 502 SRALAIANMVLGLKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRI 553
+R + +MV+ LKE+ IRG+ RT V+Y I LL D+ +N I TGWLD I
Sbjct: 503 NRQASRKHMVVALKELSIRGDFRTTVEYLIKLLETEDFEDNTITTGWLDDLI 554
>pdb|1W93|A Chain A, Crystal Structure Of Biotin Carboxylase Domain Of Acetyl-
Coenzyme A Carboxylase From Saccharomyces Cerevisiae
Length = 553
Score = 626 bits (1614), Expect = e-179, Method: Compositional matrix adjust.
Identities = 296/532 (55%), Positives = 384/532 (72%), Gaps = 20/532 (3%)
Query: 33 SEVDEFCRSLGGKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDM 92
S + +F +S GG I ILIANNG+AAVK IRS+R WAYETFG ++ + VAMATPED+
Sbjct: 31 SPLRDFVKSHGGHTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDL 90
Query: 93 RINAEHIRIADQFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTL 152
NAE+IR+ADQ++EVPGGTNNNNYANV LIV++AE VDAVW GWGHASE P LP+ L
Sbjct: 91 EANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIAERADVDAVWAGWGHASENPLLPEKL 150
Query: 153 S--TKGIIFLGPPATSMAALGDKIGSSLIAQAANVPTLPWSGS---HVKIPPESCLVTIP 207
S + +IF+GPP +M +LGDKI S+++AQ+A VP +PWSG+ V + ++ LV++
Sbjct: 151 SQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVSVD 210
Query: 208 DDVYRQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVP 267
DD+Y++ C + E+ + + +G+P MIKAS GGGGKGIR+V +++ AL+ Q E+P
Sbjct: 211 DDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIP 270
Query: 268 GSPIFIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVK 327
GSPIFIMK+A ++RHLEVQLL DQYG +L RDCSVQRRHQKIIEE P+T+A ET
Sbjct: 271 GSPIFIMKLAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFH 330
Query: 328 KLEQAARRLAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQ 387
++E+AA RL K V YV A TVEYLYS + G++YFLELNPRLQVEHP TE ++ +NLPAAQ
Sbjct: 331 EMEKAAVRLGKLVGYVSAGTVEYLYSHDDGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQ 390
Query: 388 VAVGMGIPLWQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTR------PKGHC 441
+ + MGIP+ +I +IR YGM S F+F ++T+ PKGHC
Sbjct: 391 LQIAMGIPMHRISDIRTLYGM---------NPHSASEIDFEFKTQDATKKQRRPIPKGHC 441
Query: 442 VAVRVTSEDPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGE 501
A R+TSEDP+DGFKP+ G + EL+F+S NVW YFSV + G IH FSDSQFGH+FAFGE
Sbjct: 442 TACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGE 501
Query: 502 SRALAIANMVLGLKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRI 553
+R + +MV+ LKE+ IRG+ RT V+Y I LL D+ +N I TGWLD I
Sbjct: 502 NRQASRKHMVVALKELSIRGDFRTTVEYLIKLLETEDFEDNTITTGWLDDLI 553
>pdb|2HJW|A Chain A, Crystal Structure Of The Bc Domain Of Acc2
Length = 573
Score = 620 bits (1598), Expect = e-177, Method: Compositional matrix adjust.
Identities = 308/578 (53%), Positives = 403/578 (69%), Gaps = 34/578 (5%)
Query: 7 RSAMAGL---GRGNGH----INGAVPIRSPAAMSEVDEFCRSLGGKKPIHSILIANNGMA 59
R +M+GL RG H ++ + SPA EF GG + I +LIANNG+A
Sbjct: 8 RPSMSGLHLVKRGREHKKLDLHRDFTVASPA------EFVTRFGGDRVIEKVLIANNGIA 61
Query: 60 AVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFVEVPGGTNNNNYAN 119
AVK +RSIR WAYE F E+AI V M TPED++ NAE+I++AD +V VPGG NNNNYAN
Sbjct: 62 AVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYAN 121
Query: 120 VQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPATSMAALGDKIGSSLI 179
V+LIV++A+ V AVW GWGHASE P+LP+ L G+ FLGPP+ +M ALGDKI S+++
Sbjct: 122 VELIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVV 181
Query: 180 AQAANVPTLPWSGSHVKIP------PESCLVTIPDDVYRQACVYTTEEAIASCQVVGYPA 233
AQ VPTLPWSGS + + + +++P+DVY + CV +E + + + +G+P
Sbjct: 182 AQTLQVPTLPWSGSGLTVEWTEDDLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPL 241
Query: 234 MIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMKVASQSRHLEVQLLCDQYG 293
MIKAS GGGGKGIRK + ++ LF+QVQ E+PGSPIF+MK+A +RHLEVQ+L DQYG
Sbjct: 242 MIKASEGGGGKGIRKAESAEDFPILFRQVQSEIPGSPIFLMKLAQHARHLEVQILADQYG 301
Query: 294 NVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCVNYVGAATVEYLYS 353
N +L RDCS+QRRHQKI+EE P T+APL + +EQ A RLAK V YV A TVEYLYS
Sbjct: 302 NAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYLYS 361
Query: 354 METGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIPEIRRFYGMEHGGV 413
+ G ++FLELNPRLQVEHP TE IA++NLPAAQ+ + MG+PL ++ +IR YG GV
Sbjct: 362 QD-GSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGV 420
Query: 414 YDAWRKTSVIATPFDFDQAESTRP--KGHCVAVRVTSEDPDDGFKPTSGKVQELSFKSKP 471
TP F + S P +GH +A R+TSE+PD+GFKP+SG VQEL+F+S
Sbjct: 421 -----------TPISF-ETPSNPPLARGHVIAARITSENPDEGFKPSSGTVQELNFRSSK 468
Query: 472 NVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIRGEIRTNVDYTI 531
NVW YFSV + GG+HEF+DSQFGH F++GE+R AI+NMV+ LKE+ IRG+ RT V+Y I
Sbjct: 469 NVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDFRTTVEYLI 528
Query: 532 DLLHASDYRENKIHTGWLDSRIAMRVRAERPPWYLSVV 569
+LL ++ N I TGWLD IA +V+AE+P L V+
Sbjct: 529 NLLETESFQNNDIDTGWLDYLIAEKVQAEKPDIMLGVL 566
>pdb|3JRX|A Chain A, Crystal Structure Of The Bc Domain Of Acc2 In Complex With
Soraphen A
Length = 587
Score = 617 bits (1592), Expect = e-176, Method: Compositional matrix adjust.
Identities = 298/540 (55%), Positives = 387/540 (71%), Gaps = 21/540 (3%)
Query: 37 EFCRSLGGKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINA 96
EF GG + I +LIANNG+AAVK +RSIR WAYE F E+AI V M TPED++ NA
Sbjct: 45 EFVTRFGGDRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANA 104
Query: 97 EHIRIADQFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKG 156
E+I++AD +V VPGG NNNNYANV+LIV++A+ V AVW GWGHASE P+LP+ L G
Sbjct: 105 EYIKMADHYVPVPGGPNNNNYANVELIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNG 164
Query: 157 IIFLGPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIP------PESCLVTIPDDV 210
+ FLGPP+ +M ALGDKI S+++AQ VPTLPWSGS + + + +++P+DV
Sbjct: 165 VAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDLQQGKRISVPEDV 224
Query: 211 YRQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSP 270
Y + CV +E + + + +G+P MIKAS GGGGKGIRK + ++ LF+QVQ E+PGSP
Sbjct: 225 YDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIPGSP 284
Query: 271 IFIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLE 330
IF+MK+A +RHLEVQ+L DQYGN +L RDCS+QRRHQKI+EE P T+APL + +E
Sbjct: 285 IFLMKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFME 344
Query: 331 QAARRLAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAV 390
Q A RLAK V YV A TVEYLYS + G ++FLELNPRLQVEHP TE IA++NLPAAQ+ +
Sbjct: 345 QCAIRLAKTVGYVSAGTVEYLYSQD-GSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQI 403
Query: 391 GMGIPLWQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRP--KGHCVAVRVTS 448
MG+PL ++ +IR YG GV TP F + S P +GH +A R+TS
Sbjct: 404 AMGVPLHRLKDIRLLYGESPWGV-----------TPISF-ETPSNPPLARGHVIAARITS 451
Query: 449 EDPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIA 508
E+PD+GFKP+SG VQEL+F+S NVW YFSV + GG+HEF+DSQFGH F++GE+R AI+
Sbjct: 452 ENPDEGFKPSSGTVQELNFRSSKNVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAIS 511
Query: 509 NMVLGLKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRIAMRVRAERPPWYLSV 568
NMV+ LKE+ IRG+ RT V+Y I+LL ++ N I TGWLD IA +V+AE+P L V
Sbjct: 512 NMVVALKELSIRGDFRTTVEYLINLLETESFQNNDIDTGWLDYLIAEKVQAEKPDIMLGV 571
>pdb|3JRW|A Chain A, Phosphorylated Bc Domain Of Acc2
Length = 587
Score = 617 bits (1592), Expect = e-176, Method: Compositional matrix adjust.
Identities = 298/540 (55%), Positives = 387/540 (71%), Gaps = 21/540 (3%)
Query: 37 EFCRSLGGKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINA 96
EF GG + I +LIANNG+AAVK +RSIR WAYE F E+AI V M TPED++ NA
Sbjct: 45 EFVTRFGGDRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANA 104
Query: 97 EHIRIADQFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKG 156
E+I++AD +V VPGG NNNNYANV+LIV++A+ V AVW GWGHASE P+LP+ L G
Sbjct: 105 EYIKMADHYVPVPGGPNNNNYANVELIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNG 164
Query: 157 IIFLGPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIP------PESCLVTIPDDV 210
+ FLGPP+ +M ALGDKI S+++AQ VPTLPWSGS + + + +++P+DV
Sbjct: 165 VAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDLQQGKRISVPEDV 224
Query: 211 YRQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSP 270
Y + CV +E + + + +G+P MIKAS GGGGKGIRK + ++ LF+QVQ E+PGSP
Sbjct: 225 YDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIPGSP 284
Query: 271 IFIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLE 330
IF+MK+A +RHLEVQ+L DQYGN +L RDCS+QRRHQKI+EE P T+APL + +E
Sbjct: 285 IFLMKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFME 344
Query: 331 QAARRLAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAV 390
Q A RLAK V YV A TVEYLYS + G ++FLELNPRLQVEHP TE IA++NLPAAQ+ +
Sbjct: 345 QCAIRLAKTVGYVSAGTVEYLYSQD-GSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQI 403
Query: 391 GMGIPLWQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRP--KGHCVAVRVTS 448
MG+PL ++ +IR YG GV TP F + S P +GH +A R+TS
Sbjct: 404 AMGVPLHRLKDIRLLYGESPWGV-----------TPISF-ETPSNPPLARGHVIAARITS 451
Query: 449 EDPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIA 508
E+PD+GFKP+SG VQEL+F+S NVW YFSV + GG+HEF+DSQFGH F++GE+R AI+
Sbjct: 452 ENPDEGFKPSSGTVQELNFRSSKNVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAIS 511
Query: 509 NMVLGLKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRIAMRVRAERPPWYLSV 568
NMV+ LKE+ IRG+ RT V+Y I+LL ++ N I TGWLD IA +V+AE+P L V
Sbjct: 512 NMVVALKELSIRGDFRTTVEYLINLLETESFQNNDIDTGWLDYLIAEKVQAEKPDIMLGV 571
>pdb|2YL2|A Chain A, Crystal Structure Of Human Acetyl-Coa Carboxylase 1,
Biotin Carboxylase (Bc) Domain
pdb|2YL2|B Chain B, Crystal Structure Of Human Acetyl-Coa Carboxylase 1,
Biotin Carboxylase (Bc) Domain
Length = 540
Score = 617 bits (1590), Expect = e-176, Method: Compositional matrix adjust.
Identities = 295/523 (56%), Positives = 380/523 (72%), Gaps = 18/523 (3%)
Query: 37 EFCRSLGGKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINA 96
EF GG K I +LIANNG+AAVK +RSIR W+YE F E+AI V M TPED++ NA
Sbjct: 30 EFVTRFGGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERAIRFVVMVTPEDLKANA 89
Query: 97 EHIRIADQFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKG 156
E+I++AD +V VPGG NNNNYANV+LI+++A+ V AVW GWGHASE P+LP+ L G
Sbjct: 90 EYIKMADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKLPELLLKNG 149
Query: 157 IIFLGPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESC-----LVTIPDDVY 211
I F+GPP+ +M ALGDKI SS++AQ A +PTLPWSGS +++ + ++ +P ++Y
Sbjct: 150 IAFMGPPSQAMWALGDKIASSIVAQTAGIPTLPWSGSGLRVDWQENDFSKRILNVPQELY 209
Query: 212 RQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPI 271
+ V ++ + + + VGYP MIKAS GGGGKGIRKV+N D+ LF+QVQ EVPGSPI
Sbjct: 210 EKGYVKDVDDGLQAAEEVGYPVMIKASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPI 269
Query: 272 FIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQ 331
F+M++A QSRHLEVQ+L DQYGN +L RDCSVQRRHQKIIEE P T+A + +EQ
Sbjct: 270 FVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQRRHQKIIEEAPATIATPAVFEHMEQ 329
Query: 332 AARRLAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVG 391
A +LAK V YV A TVEYLYS + G +YFLELNPRLQVEHP TE +A++NLPAAQ+ +
Sbjct: 330 CAVKLAKMVGYVSAGTVEYLYSQD-GSFYFLELNPRLQVEHPCTEMVADVNLPAAQLQIA 388
Query: 392 MGIPLWQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDF-DQAESTRPKGHCVAVRVTSED 450
MGIPL++I +IR YG+ G +P DF D A P+GH +A R+TSE+
Sbjct: 389 MGIPLYRIKDIRMMYGVSPWG-----------DSPIDFEDSAHVPCPRGHVIAARITSEN 437
Query: 451 PDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANM 510
PD+GFKP+SG VQEL+F+S NVW YFSV + GG+HEF+DSQFGH F++GE+R AI+NM
Sbjct: 438 PDEGFKPSSGTVQELNFRSNKNVWGYFSVAAAGGLHEFADSQFGHCFSWGENREEAISNM 497
Query: 511 VLGLKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRI 553
V+ LKE+ IRG+ RT V+Y I LL ++ N+I TGWLD I
Sbjct: 498 VVALKELSIRGDFRTTVEYLIKLLETESFQMNRIDTGWLDRLI 540
>pdb|1UYS|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain In Complex
With Inhibitor Haloxyfop
pdb|1UYS|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain In Complex
With Inhibitor Haloxyfop
pdb|1UYS|C Chain C, Acetyl-Coa Carboxylase Carboxyltransferase Domain In Complex
With Inhibitor Haloxyfop
Length = 737
Score = 615 bits (1585), Expect = e-175, Method: Compositional matrix adjust.
Identities = 330/679 (48%), Positives = 435/679 (64%), Gaps = 21/679 (3%)
Query: 1512 LDQKRLLARRSNTTYCYDFPLAFETALEQSWASQFPNMRPKDKALLKVTELKFADDSGTW 1571
L KR A TTY YDFP F A W + +++ D + EL D++G
Sbjct: 12 LQPKRYKAHLXGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFIS-NEL-IEDENGE- 68
Query: 1572 GTPLVLVERSPGLNNIGMVAWCMEMFTPEFPSGRTILIVANDVTFKAGSFGPREDAFFLA 1631
L VER PG N IG VA+ + + TPE+P GR ++VAND+TFK GSFGP+ED FF
Sbjct: 69 ---LTEVEREPGANAIGXVAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNK 125
Query: 1632 VTDLACAKKLPLIYLAANSGARIGVAEEVKACFEIGWTDELNPDRGFNYVYLTPEDYARI 1691
VT+ A + +P IYLAANSGARIG AEE+ F++ W D NPD+GF Y+YLT E +
Sbjct: 126 VTEYARKRGIPRIYLAANSGARIGXAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGXETL 185
Query: 1692 GS----SVIAHEMKLESGETRWVVDSIVGKEDGLGVENLTGSGAIAGAYSRAYKETFTLT 1747
+ + E + +GE R+V+ +I+G EDGLGVE L GSG IAGA SRAY + FT+T
Sbjct: 186 KKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYHDIFTIT 245
Query: 1748 YVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATN 1807
VT R+VGIGAYL RLG R IQ QPIILTG A+NK LGREVY+S++QLGG +I N
Sbjct: 246 LVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKXLGREVYTSNLQLGGTQIXYNN 305
Query: 1808 GVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPDRPVEYLPEN--SCDPRAA 1865
GV HLT DDL G+ I++W SYVP +PI+ D DRPV++ P N + D R
Sbjct: 306 GVSHLTAVDDLAGVEKIVEWXSYVPAKRNXPVPILETKDTWDRPVDFTPTNDETYDVRWX 365
Query: 1866 ICGFLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPA 1925
I G +G + G+FDK SF ETL GWA+ VV GRARLGGIP+G++ VET+TV +IPA
Sbjct: 366 IEGRETESG-FEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPA 424
Query: 1926 DPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNR-EELPLFILANWRGFSGGQRDLFE 1984
DP +S E ++ + GQVW P+SA KTAQA+ DFN E+LP ILANWRGFSGGQRD F
Sbjct: 425 DPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPXXILANWRGFSGGQRDXFN 484
Query: 1985 GILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSRINSDHIEMYADRTAKGNVL 2044
+L+ GS IV+ L YKQP+ +YIP ELRGG+WVVVD IN+D E YAD A+ VL
Sbjct: 485 EVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQXEXYADVNARAGVL 544
Query: 2045 EPEGMIEIKFRTKELLECMGRLDQKLIDLMAKLQEAKNNRTLA--MVESLQQQIKAREKQ 2102
EP+G + IKFR ++LL+ RLD K +L ++L +N++LA + + + +Q+ RE++
Sbjct: 545 EPQGXVGIKFRREKLLDTXNRLDDKYRELRSQL----SNKSLAPEVHQQISKQLADRERE 600
Query: 2103 LLPTYTQVATKFAELHDTSLRMAAKGVIKEVVDWDKXXXXXXXXXXXXVAESSLVKTLTA 2162
LLP Y Q++ +FA+LHD S R AKGVI + ++W + + E L+K L+
Sbjct: 601 LLPIYGQISLQFADLHDRSSRXVAKGVISKELEWTEARRFFFWRLRRRLNEEYLIKRLSH 660
Query: 2163 AAGDYLTHKSAIEMIKQWF 2181
G+ + I I+ W+
Sbjct: 661 QVGE-ASRLEKIARIRSWY 678
>pdb|3GID|A Chain A, The Biotin Carboxylase (Bc) Domain Of Human Acetyl-Coa
Carboxylase 2 (Acc2) In Complex With Soraphen A
pdb|3GID|B Chain B, The Biotin Carboxylase (Bc) Domain Of Human Acetyl-Coa
Carboxylase 2 (Acc2) In Complex With Soraphen A
pdb|3GLK|A Chain A, The Biotin Carboxylase (Bc) Domain Of Human Acetyl-Coa
Carboxylase 2 (Acc2)
Length = 540
Score = 605 bits (1561), Expect = e-173, Method: Compositional matrix adjust.
Identities = 291/525 (55%), Positives = 377/525 (71%), Gaps = 21/525 (4%)
Query: 37 EFCRSLGGKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINA 96
EF GG + I +LIANNG+AAVK +RSIR WAYE F E+AI V M TPED++ NA
Sbjct: 29 EFVTRFGGDRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANA 88
Query: 97 EHIRIADQFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKG 156
E+I++AD +V VPGG NNNNYANV+LIV++A+ V AVW GWGHASE P+LP+ L G
Sbjct: 89 EYIKMADHYVPVPGGPNNNNYANVELIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNG 148
Query: 157 IIFLGPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIP------PESCLVTIPDDV 210
+ FLGPP+ +M ALGDKI S+++AQ VPTLPWSGS + + + +++P+DV
Sbjct: 149 VAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDLQQGKRISVPEDV 208
Query: 211 YRQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSP 270
Y + CV +E + + + +G+P MIKAS GGGGKGIRK + ++ LF+QVQ E+PGSP
Sbjct: 209 YDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIPGSP 268
Query: 271 IFIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLE 330
IF+MK+A +RHLEVQ+L DQYGN +L RDCS+QRRHQKI+EE P T+APL + +E
Sbjct: 269 IFLMKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFME 328
Query: 331 QAARRLAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAV 390
Q A RLAK V YV A TVEYLYS + G ++FLELNPRLQVEHP TE IA++NLPAAQ+ +
Sbjct: 329 QCAIRLAKTVGYVSAGTVEYLYSQD-GSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQI 387
Query: 391 GMGIPLWQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRP--KGHCVAVRVTS 448
MG+PL ++ +IR YG GV TP F + S P +GH +A R+TS
Sbjct: 388 AMGVPLHRLKDIRLLYGESPWGV-----------TPISF-ETPSNPPLARGHVIAARITS 435
Query: 449 EDPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIA 508
E+PD+GFKP+SG VQEL+F+S NVW YFSV + GG+HEF+DSQFGH F++GE+R AI+
Sbjct: 436 ENPDEGFKPSSGTVQELNFRSSKNVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAIS 495
Query: 509 NMVLGLKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRI 553
NMV+ LKE+ IRG+ RT V+Y I+LL ++ N I TGWLD I
Sbjct: 496 NMVVALKELSIRGDFRTTVEYLINLLETESFQNNDIDTGWLDYLI 540
>pdb|3TW7|A Chain A, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
Crystallized Without Acetyl Coenzyme-A
pdb|3TW7|B Chain B, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
Crystallized Without Acetyl Coenzyme-A
pdb|3TW6|A Chain A, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
With The Allosteric Activator, Acetyl Coenzyme-A
pdb|3TW6|B Chain B, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
With The Allosteric Activator, Acetyl Coenzyme-A
pdb|3TW6|C Chain C, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
With The Allosteric Activator, Acetyl Coenzyme-A
pdb|3TW6|D Chain D, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
With The Allosteric Activator, Acetyl Coenzyme-A
Length = 1165
Score = 233 bits (595), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 157/527 (29%), Positives = 254/527 (48%), Gaps = 91/527 (17%)
Query: 47 PIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFV 106
PI IL+AN A++ R+ E I VA+ ED A H AD+
Sbjct: 13 PISKILVANRSEIAIRVFRA---------ANELGIKTVAIWAEEDKL--ALHRFKADESY 61
Query: 107 EVPGGTN-------NNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIF 159
+V G + +Y ++ ++ +A+++ DA+ PG+G SE PE D + GIIF
Sbjct: 62 QVGRGPHLARDLGPIESYLSIDEVIRVAKLSGADAIHPGYGLLSESPEFVDACNKAGIIF 121
Query: 160 LGPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTT 219
+GP A +M LG+K+ + +A + VP +P + +PDD+
Sbjct: 122 IGPKADTMRQLGNKVAARNLAISVGVPVVPATEP------------LPDDM--------- 160
Query: 220 EEAIASCQVVGYPAMIKASWGGGGKGIRKVHND----DEVRALFKQVQGEVPGSPIFIMK 275
E +GYP M+KASWGGGG+G+R + ++ EV ++ +++ K
Sbjct: 161 AEVAKMAAAIGYPVMLKASWGGGGRGMRVIRSEADLAKEVTEAKREAMAAFGKDEVYLEK 220
Query: 276 VASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARR 335
+ ++RH+E Q+L D +GNV L RDCSVQRR+QK++E P ++L + +
Sbjct: 221 LVERARHVESQILGDTHGNVVHLFERDCSVQRRNQKVVERAPAPYLSEAQRQELAAYSLK 280
Query: 336 LAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAV----G 391
+A NY+GA TVEYL +TG++YF+E+NPR+QVEH VTE + I++ AQ+ +
Sbjct: 281 IAGATNYIGAGTVEYLMDADTGKFYFIEVNPRIQVEHTVTEVVTGIDIVKAQIHILDGAA 340
Query: 392 MGIPLWQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDP 451
+G P +P E R GH + RVT+EDP
Sbjct: 341 IGTPQSGVP------------------------------NQEDIRLNGHALQCRVTTEDP 370
Query: 452 DDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGG-------IHEFSDSQFGHVFAFGESRA 504
+ F P G++ +++S F ++ GG I + D V A+ +
Sbjct: 371 EHNFIPDYGRIT--AYRSASG----FGIRLDGGTSYSGAIITRYYDPLLVKVTAWAPNPL 424
Query: 505 LAIANMVLGLKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDS 551
AI+ M L+E +IRG + TN+ + ++ +R+N T ++D+
Sbjct: 425 EAISRMDRALREFRIRG-VATNLTFLEAIIGHPKFRDNSYTTRFIDT 470
>pdb|2QF7|A Chain A, Crystal Structure Of A Complete Multifunctional Pyruvate
Carboxylase From Rhizobium Etli
pdb|2QF7|B Chain B, Crystal Structure Of A Complete Multifunctional Pyruvate
Carboxylase From Rhizobium Etli
Length = 1165
Score = 233 bits (594), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 157/527 (29%), Positives = 254/527 (48%), Gaps = 91/527 (17%)
Query: 47 PIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFV 106
PI IL+AN A++ R+ E I VA+ ED A H AD+
Sbjct: 13 PISKILVANRSEIAIRVFRA---------ANELGIKTVAIWAEEDKL--ALHRFKADESY 61
Query: 107 EVPGGTN-------NNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIF 159
+V G + +Y ++ ++ +A+++ DA+ PG+G SE PE D + GIIF
Sbjct: 62 QVGRGPHLARDLGPIESYLSIDEVIRVAKLSGADAIHPGYGLLSESPEFVDACNKAGIIF 121
Query: 160 LGPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTT 219
+GP A +M LG+K+ + +A + VP +P + +PDD+
Sbjct: 122 IGPKADTMRQLGNKVAARNLAISVGVPVVPATEP------------LPDDM--------- 160
Query: 220 EEAIASCQVVGYPAMIKASWGGGGKGIRKVHND----DEVRALFKQVQGEVPGSPIFIMK 275
E +GYP M+KASWGGGG+G+R + ++ EV ++ +++ K
Sbjct: 161 AEVAKMAAAIGYPVMLKASWGGGGRGMRVIRSEADLAKEVTEAKREAMAAFGKDEVYLEK 220
Query: 276 VASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARR 335
+ ++RH+E Q+L D +GNV L RDCSVQRR+QK++E P ++L + +
Sbjct: 221 LVERARHVESQILGDTHGNVVHLFERDCSVQRRNQKVVERAPAPYLSEAQRQELAAYSLK 280
Query: 336 LAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAV----G 391
+A NY+GA TVEYL +TG++YF+E+NPR+QVEH VTE + I++ AQ+ +
Sbjct: 281 IAGATNYIGAGTVEYLMDADTGKFYFIEVNPRIQVEHTVTEVVTGIDIVKAQIHILDGAA 340
Query: 392 MGIPLWQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDP 451
+G P +P E R GH + RVT+EDP
Sbjct: 341 IGTPQSGVP------------------------------NQEDIRLNGHALQCRVTTEDP 370
Query: 452 DDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGG-------IHEFSDSQFGHVFAFGESRA 504
+ F P G++ +++S F ++ GG I + D V A+ +
Sbjct: 371 EHNFIPDYGRIT--AYRSASG----FGIRLDGGTSYSGAIITRYYDPLLVKVTAWAPNPL 424
Query: 505 LAIANMVLGLKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDS 551
AI+ M L+E +IRG + TN+ + ++ +R+N T ++D+
Sbjct: 425 EAISRMDRALREFRIRG-VATNLTFLEAIIGHPKFRDNSYTTRFIDT 470
>pdb|3VA7|A Chain A, Crystal Structure Of The Kluyveromyces Lactis Urea
Carboxylase
Length = 1236
Score = 227 bits (579), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 151/513 (29%), Positives = 249/513 (48%), Gaps = 76/513 (14%)
Query: 45 KKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQ 104
KKP ++LIAN G AV+ ++++ K + + ++A D ++H+ AD
Sbjct: 28 KKPFETVLIANRGEIAVRIMKTL-----------KRMGIKSVAVYSDPDKYSQHVTDADF 76
Query: 105 FVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPA 164
V + G T Y ++ I+ A+ T A+ PG+G SE + D S + I+F+GP
Sbjct: 77 SVALHGRTAAETYLDIDKIINAAKKTGAQAIIPGYGFLSENADFSDRCSQENIVFVGPSG 136
Query: 165 TSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIA 224
++ LG K + IA+ A VP +P SG + +EA
Sbjct: 137 DAIRKLGLKHSAREIAERAKVPLVPGSG----------------------LIKDAKEAKE 174
Query: 225 SCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGE----VPGSPIFIMKVASQS 280
+ + YP M+K++ GGGG G++KV ++D++ +F+ VQ + + +F+ + + +
Sbjct: 175 VAKKLEYPVMVKSTAGGGGIGLQKVDSEDDIERVFETVQHQGKSYFGDAGVFMERFVNNA 234
Query: 281 RHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCV 340
RH+E+Q++ D +G A+ RDCS+QRR+QK+IEE P P T K+ A+ RL +
Sbjct: 235 RHVEIQMMGDGFGKAIAIGERDCSLQRRNQKVIEETPAPNLPEATRAKMRAASERLGSLL 294
Query: 341 NYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIP 400
Y A TVE++Y + E+YFLE+N RLQVEHP+TE + G+ + W +
Sbjct: 295 KYKCAGTVEFIYDEQRDEFYFLEVNARLQVEHPITEMV-----------TGLDLVEWML- 342
Query: 401 EIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSG 460
+ + +P DFD + G + R+ +E+P F+P+ G
Sbjct: 343 ------------------RIAANDSP-DFDNTK-IEVSGASIEARLYAENPVKDFRPSPG 382
Query: 461 KVQELSFKSKPNVWAYFS--VKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQ 518
++ +SF S WA VK G + D + G+ R AI + L E
Sbjct: 383 QLTSVSFPS----WARVDTWVKKGTNVSAEYDPTLAKIIVHGKDRNDAIMKLNQALNETA 438
Query: 519 IRGEIRTNVDYTIDLLHASDYRENKIHTGWLDS 551
+ G I TN+DY + + ++E K+ T LDS
Sbjct: 439 VYGCI-TNIDYLRSIASSKMFKEAKVATKVLDS 470
>pdb|2DZD|A Chain A, Crystal Structure Of The Biotin Carboxylase Domain Of
Pyruvate Carboxylase
pdb|2DZD|B Chain B, Crystal Structure Of The Biotin Carboxylase Domain Of
Pyruvate Carboxylase
Length = 461
Score = 221 bits (563), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 150/514 (29%), Positives = 251/514 (48%), Gaps = 71/514 (13%)
Query: 46 KPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQF 105
+ I +L+AN G A++ R+ TE I VA+ + ED + + H AD+
Sbjct: 4 RRIRKVLVANRGEIAIRVFRAC---------TELGIRTVAIYSKED--VGSYHRYKADEA 52
Query: 106 VEVPGGTNN-NNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPA 164
V G Y +++ I+E+A+ VDA+ PG+G SE + +GIIF+GP
Sbjct: 53 YLVGEGKKPIEAYLDIEGIIEIAKAHDVDAIHPGYGFLSENIQFAKRCREEGIIFIGPNE 112
Query: 165 TSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIA 224
+ GDK+ + A A +P +P S V E+ +A
Sbjct: 113 NHLDMFGDKVKARHAAVNAGIPVIPGSDGPVD---------------------GLEDVVA 151
Query: 225 SCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQS 280
+ GYP +IKA+ GGGG+G+R V + EV+ F++ + E + +++ K+
Sbjct: 152 FAEAHGYPIIIKAALGGGGRGMRIVRSKSEVKEAFERAKSEAKAAFGSDEVYVEKLIENP 211
Query: 281 RHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCV 340
+H+EVQ+L D GN+ L+ RDCSVQRRHQK++E P E +++ +AA +L + V
Sbjct: 212 KHIEVQILGDYEGNIVHLYERDCSVQRRHQKVVEVAPSVSLSDELRQRICEAAVQLMRSV 271
Query: 341 NYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIP 400
YV A TVE+L S + E+YF+E+NPR+QVEH +TE I I++ +Q+ + G L
Sbjct: 272 GYVNAGTVEFLVSGD--EFYFIEVNPRIQVEHTITEMITGIDIVQSQILIADGCSL---- 325
Query: 401 EIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSG 460
+ + P + E R G+ + RVT+EDP + F P +G
Sbjct: 326 ------------------HSHEVGIP----KQEDIRINGYAIQSRVTTEDPLNNFMPDTG 363
Query: 461 KVQELSFKSKPNVWAYFSVKS---GGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEI 517
K+ ++++S + G I + DS + + + A M+ L+E
Sbjct: 364 KI--MAYRSGGGFGVRLDAGNGFQGAVITPYYDSLLVKLSTWALTFEQAARKMLRNLREF 421
Query: 518 QIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDS 551
+IRG I+TN+ + +++ + + T ++D+
Sbjct: 422 RIRG-IKTNIPFLENVVQHPKFLSGEYDTSFIDT 454
>pdb|3JZF|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Benzimidazoles Series
pdb|3JZF|B Chain B, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Benzimidazoles Series
pdb|3JZI|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Benzimidazole Series
pdb|3JZI|B Chain B, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Benzimidazole Series
Length = 486
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 159/524 (30%), Positives = 260/524 (49%), Gaps = 77/524 (14%)
Query: 44 GKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIAD 103
G+ + I+IAN G A++ +R+ + +T VA+ + D + +H+ +AD
Sbjct: 19 GRHMLDKIVIANRGEIALRILRACKELGIKT---------VAVHSSADRDL--KHVLLAD 67
Query: 104 QFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPP 163
+ V + + +Y N+ I+ AE+T A+ PG+G SE + + G IF+GP
Sbjct: 68 ETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPK 127
Query: 164 ATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAI 223
A ++ +GDK+ + + A VP +P S + DD+ + AI
Sbjct: 128 AETIRLMGDKVSAIAAMKKAGVPCVPGSDG-----------PLGDDMDKN-------RAI 169
Query: 224 ASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQ 279
A + +GYP +IKAS GGGG+G+R V D E+ + E + +++ K
Sbjct: 170 A--KRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLEN 227
Query: 280 SRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAK- 338
RH+E+Q+L D GN L RDCS+QRRHQK++EE P AP T + R AK
Sbjct: 228 PRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAP---APGITPELRRYIGERCAKA 284
Query: 339 CVN--YVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPL 396
CV+ Y GA T E+L+ E GE+YF+E+N R+QVEHPVTE I ++L Q+ + G PL
Sbjct: 285 CVDIGYRGAGTFEFLF--ENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPL 342
Query: 397 WQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFK 456
S+ + E +GH V R+ +EDP+ F
Sbjct: 343 ------------------------SI--------KQEEVHVRGHAVECRINAEDPNT-FL 369
Query: 457 PTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKE 516
P+ GK+ V + +G + + DS G + +GE+R +AIA M L+E
Sbjct: 370 PSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQE 429
Query: 517 IQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRIAMRVRAE 560
+ I G I+TNVD I +++ +++ + +L+ ++ ++ +++
Sbjct: 430 LIIDG-IKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEKSD 472
>pdb|2GPW|A Chain A, Crystal Structure Of The Biotin Carboxylase Subunit, F363a
Mutant, Of Acetyl-Coa Carboxylase From Escherichia Coli.
pdb|2GPW|B Chain B, Crystal Structure Of The Biotin Carboxylase Subunit, F363a
Mutant, Of Acetyl-Coa Carboxylase From Escherichia Coli.
pdb|2GPW|C Chain C, Crystal Structure Of The Biotin Carboxylase Subunit, F363a
Mutant, Of Acetyl-Coa Carboxylase From Escherichia Coli.
pdb|2GPW|D Chain D, Crystal Structure Of The Biotin Carboxylase Subunit, F363a
Mutant, Of Acetyl-Coa Carboxylase From Escherichia Coli
Length = 469
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 256/520 (49%), Gaps = 77/520 (14%)
Query: 44 GKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIAD 103
G + I+IAN G A++ +R+ + +T VA+ + D + +H+ +AD
Sbjct: 18 GSHMLDKIVIANRGEIALRILRACKELGIKT---------VAVHSSADRDL--KHVLLAD 66
Query: 104 QFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPP 163
+ V + + +Y N+ I+ AE+T A+ PG+G SE + + G IF+GP
Sbjct: 67 ETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPK 126
Query: 164 ATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAI 223
A ++ +GDK+ + + A VP +P S + DD+ + AI
Sbjct: 127 AETIRLMGDKVSAIAAMKKAGVPCVPGSDG-----------PLGDDMDKN-------RAI 168
Query: 224 ASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQ 279
A + +GYP +IKAS GGGG+G+R V D E+ + E + +++ K
Sbjct: 169 A--KRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLEN 226
Query: 280 SRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAK- 338
RH+E+Q+L D GN L RDCS+QRRHQK++EE P AP T + R AK
Sbjct: 227 PRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAP---APGITPELRRYIGERCAKA 283
Query: 339 CVN--YVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPL 396
CV+ Y GA T E+L+ E GE+YF+E+N R+QVEHPVTE I ++L Q+ + G PL
Sbjct: 284 CVDIGYRGAGTFEFLF--ENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPL 341
Query: 397 WQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFK 456
S+ + E +GH V R+ +EDP+ F
Sbjct: 342 ------------------------SI--------KQEEVHVRGHAVECRINAEDPNT-FL 368
Query: 457 PTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKE 516
P+ GK+ V + +G + + DS G + +GE+R +AIA M L+E
Sbjct: 369 PSPGKITRFHAPGGAGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQE 428
Query: 517 IQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRIAMR 556
+ I G I+TNVD I +++ +++ + +L+ ++ ++
Sbjct: 429 LIIDG-IKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 467
>pdb|2GPS|A Chain A, Crystal Structure Of The Biotin Carboxylase Subunit, E23r
Mutant, Of Acetyl-Coa Carboxylase From Escherichia Coli.
pdb|2GPS|B Chain B, Crystal Structure Of The Biotin Carboxylase Subunit, E23r
Mutant, Of Acetyl-Coa Carboxylase From Escherichia Coli
Length = 469
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 256/520 (49%), Gaps = 77/520 (14%)
Query: 44 GKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIAD 103
G + I+IAN G A++ +R+ + +T VA+ + D + +H+ +AD
Sbjct: 18 GSHMLDKIVIANRGEIALRILRACKRLGIKT---------VAVHSSADRDL--KHVLLAD 66
Query: 104 QFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPP 163
+ V + + +Y N+ I+ AE+T A+ PG+G SE + + G IF+GP
Sbjct: 67 ETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPK 126
Query: 164 ATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAI 223
A ++ +GDK+ + + A VP +P S + DD+ + AI
Sbjct: 127 AETIRLMGDKVSAIAAMKKAGVPCVPGSDG-----------PLGDDMDKN-------RAI 168
Query: 224 ASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQ 279
A + +GYP +IKAS GGGG+G+R V D E+ + E + +++ K
Sbjct: 169 A--KRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLEN 226
Query: 280 SRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAK- 338
RH+E+Q+L D GN L RDCS+QRRHQK++EE P AP T + R AK
Sbjct: 227 PRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAP---APGITPELRRYIGERCAKA 283
Query: 339 CVN--YVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPL 396
CV+ Y GA T E+L+ E GE+YF+E+N R+QVEHPVTE I ++L Q+ + G PL
Sbjct: 284 CVDIGYRGAGTFEFLF--ENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPL 341
Query: 397 WQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFK 456
S+ + E +GH V R+ +EDP+ F
Sbjct: 342 ------------------------SI--------KQEEVHVRGHAVECRINAEDPNT-FL 368
Query: 457 PTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKE 516
P+ GK+ V + +G + + DS G + +GE+R +AIA M L+E
Sbjct: 369 PSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQE 428
Query: 517 IQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRIAMR 556
+ I G I+TNVD I +++ +++ + +L+ ++ ++
Sbjct: 429 LIIDG-IKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 467
>pdb|3RUP|A Chain A, Crystal Structure Of E.Coli Biotin Carboxylase In Complex
With Two Adp And Two Ca Ions
pdb|3RUP|B Chain B, Crystal Structure Of E.Coli Biotin Carboxylase In Complex
With Two Adp And Two Ca Ions
pdb|3RV3|A Chain A, Crystal Structure Of E.Coli Biotin Carboxylase In Complex
With Two Adp And One Mg Ion
pdb|3RV3|B Chain B, Crystal Structure Of E.Coli Biotin Carboxylase In Complex
With Two Adp And One Mg Ion
Length = 452
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 256/520 (49%), Gaps = 77/520 (14%)
Query: 44 GKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIAD 103
G + I+IAN G A++ +R+ + +T VA+ + D + +H+ +AD
Sbjct: 1 GSHMLDKIVIANRGEIALRILRACKELGIKT---------VAVHSSADRDL--KHVLLAD 49
Query: 104 QFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPP 163
+ V + + +Y N+ I+ AE+T A+ PG+G SE + + G IF+GP
Sbjct: 50 ETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPK 109
Query: 164 ATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAI 223
A ++ +GDK+ + + A VP +P S + DD+ + AI
Sbjct: 110 AETIRLMGDKVSAIAAMKKAGVPCVPGSDG-----------PLGDDMDKN-------RAI 151
Query: 224 ASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQ 279
A + +GYP +IKAS GGGG+G+R V D E+ + E + +++ K
Sbjct: 152 A--KRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLEN 209
Query: 280 SRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAK- 338
RH+E+Q+L D GN L RDCS+QRRHQK++EE P AP T + R AK
Sbjct: 210 PRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAP---APGITPELRRYIGERCAKA 266
Query: 339 CVN--YVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPL 396
CV+ Y GA T E+L+ E GE+YF+E+N R+QVEHPVTE I ++L Q+ + G PL
Sbjct: 267 CVDIGYRGAGTFEFLF--ENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPL 324
Query: 397 WQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFK 456
S+ + E +GH V R+ +EDP+ F
Sbjct: 325 ------------------------SI--------KQEEVHVRGHAVECRINAEDPNT-FL 351
Query: 457 PTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKE 516
P+ GK+ V + +G + + DS G + +GE+R +AIA M L+E
Sbjct: 352 PSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQE 411
Query: 517 IQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRIAMR 556
+ I G I+TNVD I +++ +++ + +L+ ++ ++
Sbjct: 412 LIIDG-IKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 450
>pdb|1BNC|A Chain A, Three-Dimensional Structure Of The Biotin Carboxylase
Subunit Of Acetyl-Coa Carboxylase
pdb|1BNC|B Chain B, Three-Dimensional Structure Of The Biotin Carboxylase
Subunit Of Acetyl-Coa Carboxylase
pdb|1DV1|A Chain A, Structure Of Biotin Carboxylase (Apo)
pdb|1DV1|B Chain B, Structure Of Biotin Carboxylase (Apo)
pdb|2J9G|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Amppnp And Adp
pdb|2J9G|B Chain B, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Amppnp And Adp
pdb|2VR1|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Atp Analog, Adpcf2p.
pdb|2VR1|B Chain B, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Atp Analog, Adpcf2p.
pdb|2V58|A Chain A, Crystal Structure Of Biotin Carboxylase From E.Coli In
Complex With Potent Inhibitor 1
pdb|2V58|B Chain B, Crystal Structure Of Biotin Carboxylase From E.Coli In
Complex With Potent Inhibitor 1
pdb|2V59|A Chain A, Crystal Structure Of Biotin Carboxylase From E.Coli In
Complex With Potent Inhibitor 2
pdb|2V59|B Chain B, Crystal Structure Of Biotin Carboxylase From E.Coli In
Complex With Potent Inhibitor 2
pdb|2V5A|A Chain A, Crystal Structure Of Biotin Carboxylase From E.Coli In
Complex With Potent Inhibitor 3
pdb|2V5A|B Chain B, Crystal Structure Of Biotin Carboxylase From E.Coli In
Complex With Potent Inhibitor 3
pdb|2W6M|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Amino-Oxazole Fragment Series
pdb|2W6M|B Chain B, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Amino-Oxazole Fragment Series
pdb|2W6N|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Amino-Oxazole Fragment Series
pdb|2W6N|B Chain B, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With Amino-Oxazole Fragment Series
pdb|2W6O|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With 4-Amino-7,7-Dimethyl-7,8-Dihydro-
Quinazolinone Fragment
pdb|2W6O|C Chain C, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With 4-Amino-7,7-Dimethyl-7,8-Dihydro-
Quinazolinone Fragment
pdb|2W6P|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With 5-Methyl-6-Phenyl-Quinazoline-2,4-Diamine
pdb|2W6P|B Chain B, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With 5-Methyl-6-Phenyl-Quinazoline-2,4-Diamine
pdb|2W6Q|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With The Triazine-2,4-Diamine Fragment
pdb|2W6Q|B Chain B, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With The Triazine-2,4-Diamine Fragment
pdb|2W6Z|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With The 3-(3-Methyl-But-2-Enyl)-3h-Purin-6-
Ylamine Fragment
pdb|2W6Z|B Chain B, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With The 3-(3-Methyl-But-2-Enyl)-3h-Purin-6-
Ylamine Fragment
pdb|2W70|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With The Amino-Thiazole-Pyrimidine Fragment
pdb|2W70|B Chain B, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With The Amino-Thiazole-Pyrimidine Fragment
pdb|2W71|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With The Imidazole-Pyrimidine Inhibitor
pdb|2W71|C Chain C, Crystal Structure Of Biotin Carboxylase From E. Coli In
Complex With The Imidazole-Pyrimidine Inhibitor
Length = 449
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 255/516 (49%), Gaps = 77/516 (14%)
Query: 48 IHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFVE 107
+ I+IAN G A++ +R+ + +T VA+ + D + +H+ +AD+ V
Sbjct: 2 LDKIVIANRGEIALRILRACKELGIKT---------VAVHSSADRDL--KHVLLADETVC 50
Query: 108 VPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPATSM 167
+ + +Y N+ I+ AE+T A+ PG+G SE + + G IF+GP A ++
Sbjct: 51 IGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETI 110
Query: 168 AALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIASCQ 227
+GDK+ + + A VP +P S + DD+ + AIA +
Sbjct: 111 RLMGDKVSAIAAMKKAGVPCVPGSDG-----------PLGDDMDKN-------RAIA--K 150
Query: 228 VVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQSRHL 283
+GYP +IKAS GGGG+G+R V D E+ + E + +++ K RH+
Sbjct: 151 RIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHV 210
Query: 284 EVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAK-CVN- 341
E+Q+L D GN L RDCS+QRRHQK++EE P AP T + R AK CV+
Sbjct: 211 EIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAP---APGITPELRRYIGERCAKACVDI 267
Query: 342 -YVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIP 400
Y GA T E+L+ E GE+YF+E+N R+QVEHPVTE I ++L Q+ + G PL
Sbjct: 268 GYRGAGTFEFLF--ENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPL---- 321
Query: 401 EIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSG 460
S+ + E +GH V R+ +EDP+ F P+ G
Sbjct: 322 --------------------SI--------KQEEVHVRGHAVECRINAEDPNT-FLPSPG 352
Query: 461 KVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIR 520
K+ V + +G + + DS G + +GE+R +AIA M L+E+ I
Sbjct: 353 KITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIID 412
Query: 521 GEIRTNVDYTIDLLHASDYRENKIHTGWLDSRIAMR 556
G I+TNVD I +++ +++ + +L+ ++ ++
Sbjct: 413 G-IKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 447
>pdb|3RV4|A Chain A, Crystal Structure Of E.Coli Biotin Carboxylase R16e Mutant
In Complex With Mg-Adp And Bicarbonate
Length = 452
Score = 208 bits (530), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 256/520 (49%), Gaps = 77/520 (14%)
Query: 44 GKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIAD 103
G + I+IAN G A++ +R+ + +T VA+ + D + +H+ +AD
Sbjct: 1 GSHMLDKIVIANRGEIALEILRACKELGIKT---------VAVHSSADRDL--KHVLLAD 49
Query: 104 QFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPP 163
+ V + + +Y N+ I+ AE+T A+ PG+G SE + + G IF+GP
Sbjct: 50 ETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPK 109
Query: 164 ATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAI 223
A ++ +GDK+ + + A VP +P S + DD+ + AI
Sbjct: 110 AETIRLMGDKVSAIAAMKKAGVPCVPGSDG-----------PLGDDMDKN-------RAI 151
Query: 224 ASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQ 279
A + +GYP +IKAS GGGG+G+R V D E+ + E + +++ K
Sbjct: 152 A--KRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLEN 209
Query: 280 SRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAK- 338
RH+E+Q+L D GN L RDCS+QRRHQK++EE P AP T + R AK
Sbjct: 210 PRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAP---APGITPELRRYIGERCAKA 266
Query: 339 CVN--YVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPL 396
CV+ Y GA T E+L+ E GE+YF+E+N R+QVEHPVTE I ++L Q+ + G PL
Sbjct: 267 CVDIGYRGAGTFEFLF--ENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPL 324
Query: 397 WQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFK 456
S+ + E +GH V R+ +EDP+ F
Sbjct: 325 ------------------------SI--------KQEEVHVRGHAVECRINAEDPNT-FL 351
Query: 457 PTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKE 516
P+ GK+ V + +G + + DS G + +GE+R +AIA M L+E
Sbjct: 352 PSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQE 411
Query: 517 IQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRIAMR 556
+ I G I+TNVD I +++ +++ + +L+ ++ ++
Sbjct: 412 LIIDG-IKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 450
>pdb|3G8C|A Chain A, Crystal Stucture Of Biotin Carboxylase In Complex With
Biotin, Bicarbonate, Adp And Mg Ion
pdb|3G8C|B Chain B, Crystal Stucture Of Biotin Carboxylase In Complex With
Biotin, Bicarbonate, Adp And Mg Ion
Length = 444
Score = 207 bits (527), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 253/513 (49%), Gaps = 77/513 (15%)
Query: 48 IHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFVE 107
+ I+IAN G A++ +R+ + +T VA+ + D + +H+ +AD+ V
Sbjct: 2 LDKIVIANRGEIALRILRACKELGIKT---------VAVHSSADRDL--KHVLLADETVC 50
Query: 108 VPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPATSM 167
+ + +Y N+ I+ AE+T A+ PG+G SE + + G IF+GP A ++
Sbjct: 51 IGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETI 110
Query: 168 AALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIASCQ 227
+GDK+ + + A VP +P S + DD+ + AIA +
Sbjct: 111 RLMGDKVSAIAAMKKAGVPCVPGSDG-----------PLGDDMDKN-------RAIA--K 150
Query: 228 VVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQSRHL 283
+GYP +IKAS GGGG+G+R V D E+ + E + +++ K RH+
Sbjct: 151 RIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHV 210
Query: 284 EVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAK-CVN- 341
E+Q+L D GN L RDCS+QRRHQK++EE P AP T + R AK CV+
Sbjct: 211 EIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAP---APGITPELRRYIGERCAKACVDI 267
Query: 342 -YVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIP 400
Y GA T E+L+ E GE+YF+E+N R+QVEHPVTE I ++L Q+ + G PL
Sbjct: 268 GYRGAGTFEFLF--ENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPL---- 321
Query: 401 EIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSG 460
S+ + E +GH V R+ +EDP+ F P+ G
Sbjct: 322 --------------------SI--------KQEEVHVRGHAVECRINAEDPNT-FLPSPG 352
Query: 461 KVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIR 520
K+ V + +G + + DS G + +GE+R +AIA M L+E+ I
Sbjct: 353 KITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIID 412
Query: 521 GEIRTNVDYTIDLLHASDYRENKIHTGWLDSRI 553
G I+TNVD I +++ +++ + +L+ ++
Sbjct: 413 G-IKTNVDLQIRIMNDENFQHGGTNIHYLEKKL 444
>pdb|1DV2|A Chain A, The Structure Of Biotin Carboxylase, Mutant E288k,
Complexed With Atp
pdb|1DV2|B Chain B, The Structure Of Biotin Carboxylase, Mutant E288k,
Complexed With Atp
Length = 452
Score = 207 bits (527), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 256/520 (49%), Gaps = 77/520 (14%)
Query: 44 GKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIAD 103
G + I+IAN G A++ +R+ + +T VA+ + D + +H+ +AD
Sbjct: 1 GSHMLDKIVIANRGEIALRILRACKELGIKT---------VAVHSSADRDL--KHVLLAD 49
Query: 104 QFVEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPP 163
+ V + + +Y N+ I+ AE+T A+ PG+G SE + + G IF+GP
Sbjct: 50 ETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPK 109
Query: 164 ATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAI 223
A ++ +GDK+ + + A VP +P S + DD+ + AI
Sbjct: 110 AETIRLMGDKVSAIAAMKKAGVPCVPGSDG-----------PLGDDMDKN-------RAI 151
Query: 224 ASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQ 279
A + +GYP +IKAS GGGG+G+R V D E+ + E + +++ K
Sbjct: 152 A--KRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLEN 209
Query: 280 SRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAK- 338
RH+E+Q+L D GN L RDCS+QRRHQK++EE P AP T + R AK
Sbjct: 210 PRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAP---APGITPELRRYIGERCAKA 266
Query: 339 CVN--YVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPL 396
CV+ Y GA T E+L+ E GE+YF+++N R+QVEHPVTE I ++L Q+ + G PL
Sbjct: 267 CVDIGYRGAGTFEFLF--ENGEFYFIKMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPL 324
Query: 397 WQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFK 456
S+ + E +GH V R+ +EDP+ F
Sbjct: 325 ------------------------SI--------KQEEVHVRGHAVECRINAEDPNT-FL 351
Query: 457 PTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKE 516
P+ GK+ V + +G + + DS G + +GE+R +AIA M L+E
Sbjct: 352 PSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQE 411
Query: 517 IQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLDSRIAMR 556
+ I G I+TNVD I +++ +++ + +L+ ++ ++
Sbjct: 412 LIIDG-IKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ 450
>pdb|3G8D|A Chain A, Crystal Structure Of The Biotin Carboxylase Subunit, E296a
Mutant, Of Acetyl-Coa Carboxylase From Escherichia Coli
pdb|3G8D|B Chain B, Crystal Structure Of The Biotin Carboxylase Subunit, E296a
Mutant, Of Acetyl-Coa Carboxylase From Escherichia Coli
Length = 444
Score = 205 bits (521), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 157/513 (30%), Positives = 252/513 (49%), Gaps = 77/513 (15%)
Query: 48 IHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFVE 107
+ I+IAN G A++ +R+ + +T VA+ + D + +H+ +AD+ V
Sbjct: 2 LDKIVIANRGEIALRILRACKELGIKT---------VAVHSSADRDL--KHVLLADETVC 50
Query: 108 VPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPATSM 167
+ + +Y N+ I+ AE+T A+ PG+G SE + + G IF+GP A ++
Sbjct: 51 IGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETI 110
Query: 168 AALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIASCQ 227
+GDK+ + + A VP +P S + DD+ + AIA +
Sbjct: 111 RLMGDKVSAIAAMKKAGVPCVPGSDG-----------PLGDDMDKN-------RAIA--K 150
Query: 228 VVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQSRHL 283
+GYP +IKAS GGGG+G+R V D E+ + E + +++ K RH+
Sbjct: 151 RIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHV 210
Query: 284 EVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAK-CVN- 341
E+Q+L D GN L RDCS+QRRHQK++EE P AP T + R AK CV+
Sbjct: 211 EIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAP---APGITPELRRYIGERCAKACVDI 267
Query: 342 -YVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIP 400
Y GA T E+L+ E GE+YF+E+N R+QV HPVTE I ++L Q+ + G PL
Sbjct: 268 GYRGAGTFEFLF--ENGEFYFIEMNTRIQVAHPVTEMITGVDLIKEQLRIAAGQPL---- 321
Query: 401 EIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSG 460
S+ + E +GH V R+ +EDP+ F P+ G
Sbjct: 322 --------------------SI--------KQEEVHVRGHAVECRINAEDPNT-FLPSPG 352
Query: 461 KVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIR 520
K+ V + +G + + DS G + +GE+R +AIA M L+E+ I
Sbjct: 353 KITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIID 412
Query: 521 GEIRTNVDYTIDLLHASDYRENKIHTGWLDSRI 553
G I+TNVD I +++ +++ + +L+ ++
Sbjct: 413 G-IKTNVDLQIRIMNDENFQHGGTNIHYLEKKL 444
>pdb|4HNT|A Chain A, Crystal Structure Of F403a Mutant Of S. Aureus Pyruvate
Carboxylase
pdb|4HNT|B Chain B, Crystal Structure Of F403a Mutant Of S. Aureus Pyruvate
Carboxylase
pdb|4HNT|C Chain C, Crystal Structure Of F403a Mutant Of S. Aureus Pyruvate
Carboxylase
pdb|4HNT|D Chain D, Crystal Structure Of F403a Mutant Of S. Aureus Pyruvate
Carboxylase
Length = 1173
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 244/517 (47%), Gaps = 71/517 (13%)
Query: 42 LGGKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRI 101
+ K I +L+AN G A++ R+ E I VA+ + ED ++ H
Sbjct: 21 MASMKQIKKLLVANRGEIAIRIFRA---------AAELDISTVAIYSNEDK--SSLHRYK 69
Query: 102 ADQFVEVPGGTN-NNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFL 160
AD+ V +Y N++ I+++A+ VDA+ PG+G SE + + +GI F+
Sbjct: 70 ADESYLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEGIKFI 129
Query: 161 GPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTE 220
GP + GDK+ + A A++P +P + +K + E
Sbjct: 130 GPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIK---------------------SYE 168
Query: 221 EAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVP----GSPIFIMKV 276
A + G+P MIKA+ GGGGKG+R V + E+ F + + E S ++I +
Sbjct: 169 LAKEFAEEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERY 228
Query: 277 ASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRL 336
+H+EVQ++ D++GN+ L RDCSVQRRHQK++E P +++ AA +L
Sbjct: 229 IDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSPTLRQRICDAAIQL 288
Query: 337 AKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPL 396
+ + YV A TVE+L S + E++F+E+NPR+QVEH +TE + I++ Q+ V G L
Sbjct: 289 MENIKYVNAGTVEFLVSGD--EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGADL 346
Query: 397 WQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFK 456
+G E + Q + G+ + R+T+EDP + F
Sbjct: 347 ---------FGEE-----------------INMPQQKDITTLGYAIQCRITTEDPLNDFM 380
Query: 457 PTSGKVQELSFKSKPNVWAYFSVKS---GGGIHEFSDSQFGHVFAFGESRALAIANMVLG 513
P +G + ++++S G I + DS + S A MV
Sbjct: 381 PDTGTI--IAYRSSGGAGVRLDAGDGFQGAEISPYYDSLLVKLSTHAISFKQAEEKMVRS 438
Query: 514 LKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLD 550
L+E++IRG ++TN+ + I+++ + T +++
Sbjct: 439 LREMRIRG-VKTNIPFLINVMKNKKFTSGDYTTKFIE 474
Score = 37.4 bits (85), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 654 LDGNSHVVYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVSDGSHIDADT 713
++G + +Y ++E T + + + +PS + A+ P + VS G + A+
Sbjct: 1071 MNGQARRIYIKDENVHTNANVKPKA----DKSNPSHIGAQMPGSVTEVKVSVGETVKANQ 1126
Query: 714 PYAEVEVMKMCMPLLSPASGVL-QFKMAEGQAMQAGELIARLD 755
P E MKM + +P GV+ Q + G + G+L+ ++
Sbjct: 1127 PLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE 1169
>pdb|3HO8|A Chain A, Crystal Structure Of S. Aureus Pyruvate Carboxylase In
Complex With Coenzyme A
pdb|3HO8|D Chain D, Crystal Structure Of S. Aureus Pyruvate Carboxylase In
Complex With Coenzyme A
pdb|3HO8|C Chain C, Crystal Structure Of S. Aureus Pyruvate Carboxylase In
Complex With Coenzyme A
pdb|3HO8|B Chain B, Crystal Structure Of S. Aureus Pyruvate Carboxylase In
Complex With Coenzyme A
Length = 1150
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 244/513 (47%), Gaps = 71/513 (13%)
Query: 46 KPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQF 105
K I +L+AN G A++ R+ E I VA+ + ED ++ H AD+
Sbjct: 2 KQIKKLLVANRGEIAIRIFRA---------AAELDISTVAIYSNEDK--SSLHRYKADES 50
Query: 106 VEVPGGTN-NNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPA 164
V +Y N++ I+++A+ VDA+ PG+G SE + + +GI F+GP
Sbjct: 51 YLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEGIKFIGPHL 110
Query: 165 TSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIA 224
+ GDK+ + A A++P +P + +K + E A
Sbjct: 111 EHLDMFGDKVKARTTAIKADLPVIPGTDGPIK---------------------SYELAKE 149
Query: 225 SCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVP----GSPIFIMKVASQS 280
+ G+P MIKA+ GGGGKG+R V + E+ F + + E S ++I +
Sbjct: 150 FAEEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNP 209
Query: 281 RHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCV 340
+H+EVQ++ D++GN+ L RDCSVQRRHQK++E P +++ AA +L + +
Sbjct: 210 KHIEVQVIGDEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSPTLRQRICDAAIQLMENI 269
Query: 341 NYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIP 400
YV A TVE+L S + E++F+E+NPR+QVEH +TE + I++ Q+ V G L
Sbjct: 270 KYVNAGTVEFLVSGD--EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGADL---- 323
Query: 401 EIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSG 460
+G E I P Q + G+ + R+T+EDP + F P +G
Sbjct: 324 -----FGEE-------------INMP----QQKDITTLGYAIQCRITTEDPLNDFMPDTG 361
Query: 461 KVQELSFKSKPNVWAYFSVKS---GGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEI 517
+ ++++S G I + DS + S A MV L+E+
Sbjct: 362 TI--IAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLSTHAISFKQAEEKMVRSLREM 419
Query: 518 QIRGEIRTNVDYTIDLLHASDYRENKIHTGWLD 550
+IRG ++TN+ + I+++ + T +++
Sbjct: 420 RIRG-VKTNIPFLINVMKNKKFTSGDYTTKFIE 451
Score = 37.4 bits (85), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 654 LDGNSHVVYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVSDGSHIDADT 713
++G + +Y ++E T + + + +PS + A+ P + VS G + A+
Sbjct: 1048 MNGQARRIYIKDENVHTNANVKPKA----DKSNPSHIGAQMPGSVTEVKVSVGETVKANQ 1103
Query: 714 PYAEVEVMKMCMPLLSPASGVL-QFKMAEGQAMQAGELIARLD 755
P E MKM + +P GV+ Q + G + G+L+ ++
Sbjct: 1104 PLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE 1146
>pdb|3BG5|A Chain A, Crystal Structure Of Staphylococcus Aureus Pyruvate
Carboxylase
pdb|3BG5|B Chain B, Crystal Structure Of Staphylococcus Aureus Pyruvate
Carboxylase
pdb|3BG5|C Chain C, Crystal Structure Of Staphylococcus Aureus Pyruvate
Carboxylase
pdb|3BG5|D Chain D, Crystal Structure Of Staphylococcus Aureus Pyruvate
Carboxylase
Length = 1173
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 245/517 (47%), Gaps = 71/517 (13%)
Query: 42 LGGKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRI 101
+ K I +L+AN G A++ R+ E I VA+ + ED ++ H
Sbjct: 21 MASMKQIKKLLVANRGEIAIRIFRA---------AAELDISTVAIYSNEDK--SSLHRYK 69
Query: 102 ADQFVEVPGGTN-NNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFL 160
AD+ V +Y N++ I+++A+ VDA+ PG+G SE + + +GI F+
Sbjct: 70 ADESYLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEGIKFI 129
Query: 161 GPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTE 220
GP + GDK+ + A A++P +P + +K + E
Sbjct: 130 GPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIK---------------------SYE 168
Query: 221 EAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVP----GSPIFIMKV 276
A + G+P MIKA+ GGGGKG+R V + E+ F + + E S ++I +
Sbjct: 169 LAKEFAEEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERY 228
Query: 277 ASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRL 336
+H+EVQ++ D++GN+ L RDCSVQRRHQK++E P +++ AA +L
Sbjct: 229 IDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSPTLRQRICDAAIQL 288
Query: 337 AKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPL 396
+ + YV A TVE+L S + E++F+E+NPR+QVEH +TE + I++ Q+ V G L
Sbjct: 289 MENIKYVNAGTVEFLVSGD--EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGADL 346
Query: 397 WQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFK 456
+G E I P Q + G+ + R+T+EDP + F
Sbjct: 347 ---------FGEE-------------INMP----QQKDITTLGYAIQCRITTEDPLNDFM 380
Query: 457 PTSGKVQELSFKSKPNVWAYFSVKS---GGGIHEFSDSQFGHVFAFGESRALAIANMVLG 513
P +G + ++++S G I + DS + S A MV
Sbjct: 381 PDTGTI--IAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLSTHAISFKQAEEKMVRS 438
Query: 514 LKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLD 550
L+E++IRG ++TN+ + I+++ + T +++
Sbjct: 439 LREMRIRG-VKTNIPFLINVMKNKKFTSGDYTTKFIE 474
Score = 37.4 bits (85), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 654 LDGNSHVVYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVSDGSHIDADT 713
++G + +Y ++E T + + + +PS + A+ P + VS G + A+
Sbjct: 1071 MNGQARRIYIKDENVHTNANVKPKA----DKSNPSHIGAQMPGSVTEVKVSVGETVKANQ 1126
Query: 714 PYAEVEVMKMCMPLLSPASGVL-QFKMAEGQAMQAGELIARLD 755
P E MKM + +P GV+ Q + G + G+L+ ++
Sbjct: 1127 PLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE 1169
>pdb|3HBL|A Chain A, Crystal Structure Of S. Aureus Pyruvate Carboxylase T908a
Mutant
pdb|3HBL|B Chain B, Crystal Structure Of S. Aureus Pyruvate Carboxylase T908a
Mutant
pdb|3HBL|C Chain C, Crystal Structure Of S. Aureus Pyruvate Carboxylase T908a
Mutant
pdb|3HBL|D Chain D, Crystal Structure Of S. Aureus Pyruvate Carboxylase T908a
Mutant
Length = 1150
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 244/513 (47%), Gaps = 71/513 (13%)
Query: 46 KPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQF 105
K I +L+AN G A++ R+ E I VA+ + ED ++ H AD+
Sbjct: 2 KQIKKLLVANRGEIAIRIFRA---------AAELDISTVAIYSNEDK--SSLHRYKADES 50
Query: 106 VEVPGGTN-NNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPA 164
V +Y N++ I+++A+ VDA+ PG+G SE + + +GI F+GP
Sbjct: 51 YLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEGIKFIGPHL 110
Query: 165 TSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIA 224
+ GDK+ + A A++P +P + +K + E A
Sbjct: 111 EHLDMFGDKVKARTTAIKADLPVIPGTDGPIK---------------------SYELAKE 149
Query: 225 SCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVP----GSPIFIMKVASQS 280
+ G+P MIKA+ GGGGKG+R V + E+ F + + E S ++I +
Sbjct: 150 FAEEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNP 209
Query: 281 RHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCV 340
+H+EVQ++ D++GN+ L RDCSVQRRHQK++E P +++ AA +L + +
Sbjct: 210 KHIEVQVIGDEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSPTLRQRICDAAIQLMENI 269
Query: 341 NYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIP 400
YV A TVE+L S + E++F+E+NPR+QVEH +TE + I++ Q+ V G L
Sbjct: 270 KYVNAGTVEFLVSGD--EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGADL---- 323
Query: 401 EIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSG 460
+G E I P Q + G+ + R+T+EDP + F P +G
Sbjct: 324 -----FGEE-------------INMP----QQKDITTLGYAIQCRITTEDPLNDFMPDTG 361
Query: 461 KVQELSFKSKPNVWAYFSVKS---GGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEI 517
+ ++++S G I + DS + S A MV L+E+
Sbjct: 362 TI--IAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLSTHAISFKQAEEKMVRSLREM 419
Query: 518 QIRGEIRTNVDYTIDLLHASDYRENKIHTGWLD 550
+IRG ++TN+ + I+++ + T +++
Sbjct: 420 RIRG-VKTNIPFLINVMKNKKFTSGDYTTKFIE 451
Score = 37.4 bits (85), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 654 LDGNSHVVYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVSDGSHIDADT 713
++G + +Y ++E T + + + +PS + A+ P + VS G + A+
Sbjct: 1048 MNGQARRIYIKDENVHTNANVKPKA----DKSNPSHIGAQMPGSVTEVKVSVGETVKANQ 1103
Query: 714 PYAEVEVMKMCMPLLSPASGVL-QFKMAEGQAMQAGELIARLD 755
P E MKM + +P GV+ Q + G + G+L+ ++
Sbjct: 1104 PLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE 1146
>pdb|3HB9|A Chain A, Crystal Structure Of S. Aureus Pyruvate Carboxylase A610t
Mutant
pdb|3HB9|B Chain B, Crystal Structure Of S. Aureus Pyruvate Carboxylase A610t
Mutant
pdb|3HB9|C Chain C, Crystal Structure Of S. Aureus Pyruvate Carboxylase A610t
Mutant
pdb|3HB9|D Chain D, Crystal Structure Of S. Aureus Pyruvate Carboxylase A610t
Mutant
Length = 1150
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 244/513 (47%), Gaps = 71/513 (13%)
Query: 46 KPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQF 105
K I +L+AN G A++ R+ E I VA+ + ED ++ H AD+
Sbjct: 2 KQIKKLLVANRGEIAIRIFRA---------AAELDISTVAIYSNEDK--SSLHRYKADES 50
Query: 106 VEVPGGTN-NNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPA 164
V +Y N++ I+++A+ VDA+ PG+G SE + + +GI F+GP
Sbjct: 51 YLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEGIKFIGPHL 110
Query: 165 TSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIA 224
+ GDK+ + A A++P +P + +K + E A
Sbjct: 111 EHLDMFGDKVKARTTAIKADLPVIPGTDGPIK---------------------SYELAKE 149
Query: 225 SCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVP----GSPIFIMKVASQS 280
+ G+P MIKA+ GGGGKG+R V + E+ F + + E S ++I +
Sbjct: 150 FAEEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNP 209
Query: 281 RHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCV 340
+H+EVQ++ D++GN+ L RDCSVQRRHQK++E P +++ AA +L + +
Sbjct: 210 KHIEVQVIGDEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSPTLRQRICDAAIQLMENI 269
Query: 341 NYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIP 400
YV A TVE+L S + E++F+E+NPR+QVEH +TE + I++ Q+ V G L
Sbjct: 270 KYVNAGTVEFLVSGD--EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGADL---- 323
Query: 401 EIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSG 460
+G E I P Q + G+ + R+T+EDP + F P +G
Sbjct: 324 -----FGEE-------------INMP----QQKDITTLGYAIQCRITTEDPLNDFMPDTG 361
Query: 461 KVQELSFKSKPNVWAYFSVKS---GGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEI 517
+ ++++S G I + DS + S A MV L+E+
Sbjct: 362 TI--IAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLSTHAISFKQAEEKMVRSLREM 419
Query: 518 QIRGEIRTNVDYTIDLLHASDYRENKIHTGWLD 550
+IRG ++TN+ + I+++ + T +++
Sbjct: 420 RIRG-VKTNIPFLINVMKNKKFTSGDYTTKFIE 451
Score = 37.4 bits (85), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 654 LDGNSHVVYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVSDGSHIDADT 713
++G + +Y ++E T + + + +PS + A+ P + VS G + A+
Sbjct: 1048 MNGQARRIYIKDENVHTNANVKPKA----DKSNPSHIGAQMPGSVTEVKVSVGETVKANQ 1103
Query: 714 PYAEVEVMKMCMPLLSPASGVL-QFKMAEGQAMQAGELIARLD 755
P E MKM + +P GV+ Q + G + G+L+ ++
Sbjct: 1104 PLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE 1146
>pdb|4HNU|A Chain A, Crystal Structure Of K442e Mutant Of S. Aureus Pyruvate
Carboxylase
pdb|4HNU|B Chain B, Crystal Structure Of K442e Mutant Of S. Aureus Pyruvate
Carboxylase
pdb|4HNU|C Chain C, Crystal Structure Of K442e Mutant Of S. Aureus Pyruvate
Carboxylase
pdb|4HNU|D Chain D, Crystal Structure Of K442e Mutant Of S. Aureus Pyruvate
Carboxylase
Length = 1173
Score = 204 bits (519), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 245/517 (47%), Gaps = 71/517 (13%)
Query: 42 LGGKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRI 101
+ K I +L+AN G A++ R+ E I VA+ + ED ++ H
Sbjct: 21 MASMKQIKKLLVANRGEIAIRIFRA---------AAELDISTVAIYSNEDK--SSLHRYK 69
Query: 102 ADQFVEVPGGTN-NNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFL 160
AD+ V +Y N++ I+++A+ VDA+ PG+G SE + + +GI F+
Sbjct: 70 ADESYLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEGIKFI 129
Query: 161 GPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTE 220
GP + GDK+ + A A++P +P + +K + E
Sbjct: 130 GPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIK---------------------SYE 168
Query: 221 EAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVP----GSPIFIMKV 276
A + G+P MIKA+ GGGGKG+R V + E+ F + + E S ++I +
Sbjct: 169 LAKEFAEEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERY 228
Query: 277 ASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRL 336
+H+EVQ++ D++GN+ L RDCSVQRRHQK++E P +++ AA +L
Sbjct: 229 IDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSPTLRQRICDAAIQL 288
Query: 337 AKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPL 396
+ + YV A TVE+L S + E++F+E+NPR+QVEH +TE + I++ Q+ V G L
Sbjct: 289 MENIKYVNAGTVEFLVSGD--EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGADL 346
Query: 397 WQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFK 456
+G E I P Q + G+ + R+T+EDP + F
Sbjct: 347 ---------FGEE-------------INMP----QQKDITTLGYAIQCRITTEDPLNDFM 380
Query: 457 PTSGKVQELSFKSKPNVWAYFSVKS---GGGIHEFSDSQFGHVFAFGESRALAIANMVLG 513
P +G + ++++S G I + DS + S A MV
Sbjct: 381 PDTGTI--IAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLSTHAISFKQAEEEMVRS 438
Query: 514 LKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLD 550
L+E++IRG ++TN+ + I+++ + T +++
Sbjct: 439 LREMRIRG-VKTNIPFLINVMKNKKFTSGDYTTKFIE 474
Score = 37.4 bits (85), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 654 LDGNSHVVYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVSDGSHIDADT 713
++G + +Y ++E T + + + +PS + A+ P + VS G + A+
Sbjct: 1071 MNGQARRIYIKDENVHTNANVKPKA----DKSNPSHIGAQMPGSVTEVKVSVGETVKANQ 1126
Query: 714 PYAEVEVMKMCMPLLSPASGVL-QFKMAEGQAMQAGELIARLD 755
P E MKM + +P GV+ Q + G + G+L+ ++
Sbjct: 1127 PLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE 1169
>pdb|2VPQ|A Chain A, Crystal Structure Of Biotin Carboxylase From S. Aureus
Complexed With Amppnp
pdb|2VPQ|B Chain B, Crystal Structure Of Biotin Carboxylase From S. Aureus
Complexed With Amppnp
Length = 451
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 152/512 (29%), Positives = 240/512 (46%), Gaps = 69/512 (13%)
Query: 48 IHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFVE 107
+ +LIAN G AV+ IR+ R +T VA+ + D +A H +IAD+
Sbjct: 1 MKKVLIANRGEIAVRIIRACRDLGIQT---------VAIYSEGDK--DALHTQIADEAYC 49
Query: 108 VPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPATSM 167
V + ++Y N+ I+ +A T D V PG+G +E + + + F+GP S+
Sbjct: 50 VGPTLSKDSYLNIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFIGPSYQSI 109
Query: 168 AALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIASCQ 227
+G K + ANVP +P S +K DV EA +
Sbjct: 110 QKMGIKDVAKAEMIKANVPVVPGSDGLMK------------DV---------SEAKKIAK 148
Query: 228 VVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVP----GSPIFIMKVASQSRHL 283
+GYP +IKA+ GGGGKGIR ++ E+ F+ + E +++ K RH+
Sbjct: 149 KIGYPVIIKATAGGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIENFRHI 208
Query: 284 EVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCVNYV 343
E+Q++ D YGNV L RDC++QRR QK++EE P + ET +++ AA R AK VNY
Sbjct: 209 EIQIVGDSYGNVIHLGERDCTIQRRMQKLVEEAPSPILDDETRREMGNAAVRAAKAVNYE 268
Query: 344 GAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIPEIR 403
A T+E++Y + ++YF+E+N R+QVEHPVTE + I+L Q+ V MG L
Sbjct: 269 NAGTIEFIYDLNDNKFYFMEMNTRIQVEHPVTEMVTGIDLVKLQLQVAMGDVL------- 321
Query: 404 RFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSGKVQ 463
P+ + E + GH + R+ +E+P F P+ GK++
Sbjct: 322 ----------------------PY---KQEDIKLTGHAIEFRINAENPYKNFMPSPGKIE 356
Query: 464 ELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIRGEI 523
+ V + + I + DS + +R AI + L E + G I
Sbjct: 357 QYLAPGGYGVRIESACYTNYTIPPYYDSMVAKLIIHEPTRDEAIMAGIRALSEFVVLG-I 415
Query: 524 RTNVDYTIDLLHASDYRENKIHTGWLDSRIAM 555
T + + I LL+ +R K +T +L+ M
Sbjct: 416 DTTIPFHIKLLNNDIFRSGKFNTNFLEQNSIM 447
>pdb|3N6R|A Chain A, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|C Chain C, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|E Chain E, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|G Chain G, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|I Chain I, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|K Chain K, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
Length = 681
Score = 204 bits (518), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 156/498 (31%), Positives = 224/498 (44%), Gaps = 89/498 (17%)
Query: 48 IHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFVE 107
+ ILIAN G A + I++ R T +A D A H+++AD+ V
Sbjct: 2 FNKILIANRGEIACRVIKTARKMGIST-----------VAIYSDADKQALHVQMADEAVH 50
Query: 108 VPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPATSM 167
+ N +Y + ++ T AV PG+G SE + + L +G+IF+GPP ++
Sbjct: 51 IGPPPANQSYIVIDKVMAAIRATGAQAVHPGYGFLSENSKFAEALEAEGVIFVGPPKGAI 110
Query: 168 AALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIASCQ 227
A+GDKI S IAQ ANV T+P + +EA+
Sbjct: 111 EAMGDKITSKKIAQEANVSTVPGY---------------------MGLIEDADEAVKISN 149
Query: 228 VVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQSRHL 283
+GYP MIKAS GGGGKG+R ND E R F+ + E S IFI K +Q RH+
Sbjct: 150 QIGYPVMIKASAGGGGKGMRIAWNDQEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHI 209
Query: 284 EVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCVNYV 343
E+Q+LCD +GN L R+CS+QRR+QK++EE P T + + + A LAK V Y
Sbjct: 210 EIQVLCDSHGNGIYLGERECSIQRRNQKVVEEAPSPFLDEATRRAMGEQAVALAKAVGYA 269
Query: 344 GAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIPEIR 403
A TVE++ + +YFLE+N RLQVEHPVTE I ++L + V G PL
Sbjct: 270 SAGTVEFIVDGQK-NFYFLEMNTRLQVEHPVTELITGVDLVEQMIRVAAGEPL------- 321
Query: 404 RFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPT----- 458
+ G V + G + R+ +EDP GF P+
Sbjct: 322 ---SITQGDV----------------------KLTGWAIENRLYAEDPYRGFLPSIGRLT 356
Query: 459 ---------------SGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESR 503
+GK Q + + V V GG I + D + + +R
Sbjct: 357 RYRPPAETAAGPLLVNGKWQGDAPSGEAAVRNDTGVYEGGEISMYYDPMIAKLCTWAPTR 416
Query: 504 ALAIANMVLGLKEIQIRG 521
A AI M + L ++ G
Sbjct: 417 AAAIEAMRIALDSFEVEG 434
>pdb|2VQD|A Chain A, Crystal Structure Of Biotin Carboxylase From Pseudomonas
Aeruginosa Complexed With Ampcp
pdb|2C00|A Chain A, Crystal Structure Of Biotin Carboxylase From Pseudomonas
Aeruginosa In Apo Form
pdb|2C00|B Chain B, Crystal Structure Of Biotin Carboxylase From Pseudomonas
Aeruginosa In Apo Form
Length = 464
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 250/515 (48%), Gaps = 77/515 (14%)
Query: 48 IHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFVE 107
+ +LIAN G A++ +R+ + +T VA+ + D + H+ +AD+ V
Sbjct: 2 LEKVLIANRGEIALRILRACKELGIKT---------VAVHSTADRELM--HLSLADESVC 50
Query: 108 VPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPATSM 167
+ +Y + I+ AE+T A+ PG+G +E + + + G F+GP A +
Sbjct: 51 IGPAPATQSYLQIPAIIAAAEVTGATAIHPGYGFLAENADFAEQIERSGFTFVGPTAEVI 110
Query: 168 AALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIASCQ 227
+GDK+ + + A VPT+P S +P+D E A+A +
Sbjct: 111 RLMGDKVSAKDAMKRAGVPTVPGSDG-----------PLPED---------EETALAIAR 150
Query: 228 VVGYPAMIKASWGGGGKGIRKVHNDDEV---RALFKQVQGEVPGSP-IFIMKVASQSRHL 283
VGYP +IKA+ GGGG+G+R V+++ E+ L + G G+P +++ K + RH+
Sbjct: 151 EVGYPVIIKAAGGGGGRGMRVVYDESELIKSAKLTRTEAGAAFGNPMVYLEKFLTNPRHV 210
Query: 284 EVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAP-LETVKKLEQAARRLAKCV-- 340
EVQ+L D GN L RDCS+QRRHQK+IEE P AP ++ + E AR + C+
Sbjct: 211 EVQVLSDGQGNAIHLGDRDCSLQRRHQKVIEEAP---APGIDEKARQEVFARCVQACIEI 267
Query: 341 NYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIP 400
Y GA T E+LY E G +YF+E+N R+QVEHPV+E + +++ + + G L
Sbjct: 268 GYRGAGTFEFLY--ENGRFYFIEMNTRVQVEHPVSEMVTGVDIVKEMLRIASGEKL---- 321
Query: 401 EIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSG 460
+ R+ V+ +GH + R+ +EDP F P+ G
Sbjct: 322 ---------------SIRQEDVVI-------------RGHALECRINAEDPKT-FMPSPG 352
Query: 461 KVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIR 520
KV+ V + SG + DS G V +G R A+A M L E+ +
Sbjct: 353 KVKHFHAPGGNGVRVDSHLYSGYSVPPNYDSLVGKVITYGADRDEALARMRNALDELIVD 412
Query: 521 GEIRTNVDYTIDLLHASDYRENKIHTGWLDSRIAM 555
G I+TN + DL+ + + + ++ +L+ ++ M
Sbjct: 413 G-IKTNTELHKDLVRDAAFCKGGVNIHYLEKKLGM 446
>pdb|4HNV|A Chain A, Crystal Structure Of R54e Mutant Of S. Aureus Pyruvate
Carboxylase
pdb|4HNV|B Chain B, Crystal Structure Of R54e Mutant Of S. Aureus Pyruvate
Carboxylase
pdb|4HNV|C Chain C, Crystal Structure Of R54e Mutant Of S. Aureus Pyruvate
Carboxylase
pdb|4HNV|D Chain D, Crystal Structure Of R54e Mutant Of S. Aureus Pyruvate
Carboxylase
Length = 1173
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 244/517 (47%), Gaps = 71/517 (13%)
Query: 42 LGGKKPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRI 101
+ K I +L+AN G A++ + E I VA+ + ED ++ H
Sbjct: 21 MASMKQIKKLLVANRGEIAIRIFEA---------AAELDISTVAIYSNEDK--SSLHRYK 69
Query: 102 ADQFVEVPGGTN-NNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFL 160
AD+ V +Y N++ I+++A+ VDA+ PG+G SE + + +GI F+
Sbjct: 70 ADESYLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEGIKFI 129
Query: 161 GPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTE 220
GP + GDK+ + A A++P +P + +K + E
Sbjct: 130 GPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIK---------------------SYE 168
Query: 221 EAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVP----GSPIFIMKV 276
A + G+P MIKA+ GGGGKG+R V + E+ F + + E S ++I +
Sbjct: 169 LAKEFAEEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERY 228
Query: 277 ASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRL 336
+H+EVQ++ D++GN+ L RDCSVQRRHQK++E P +++ AA +L
Sbjct: 229 IDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSPTLRQRICDAAIQL 288
Query: 337 AKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPL 396
+ + YV A TVE+L S + E++F+E+NPR+QVEH +TE + I++ Q+ V G L
Sbjct: 289 MENIKYVNAGTVEFLVSGD--EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGADL 346
Query: 397 WQIPEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFK 456
+G E I P Q + G+ + R+T+EDP + F
Sbjct: 347 ---------FGEE-------------INMP----QQKDITTLGYAIQCRITTEDPLNDFM 380
Query: 457 PTSGKVQELSFKSKPNVWAYFSVKS---GGGIHEFSDSQFGHVFAFGESRALAIANMVLG 513
P +G + ++++S G I + DS + S A MV
Sbjct: 381 PDTGTI--IAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLSTHAISFKQAEEKMVRS 438
Query: 514 LKEIQIRGEIRTNVDYTIDLLHASDYRENKIHTGWLD 550
L+E++IRG ++TN+ + I+++ + T +++
Sbjct: 439 LREMRIRG-VKTNIPFLINVMKNKKFTSGDYTTKFIE 474
Score = 37.4 bits (85), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 654 LDGNSHVVYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVSDGSHIDADT 713
++G + +Y ++E T + + + +PS + A+ P + VS G + A+
Sbjct: 1071 MNGQARRIYIKDENVHTNANVKPKA----DKSNPSHIGAQMPGSVTEVKVSVGETVKANQ 1126
Query: 714 PYAEVEVMKMCMPLLSPASGVL-QFKMAEGQAMQAGELIARLD 755
P E MKM + +P GV+ Q + G + G+L+ ++
Sbjct: 1127 PLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE 1169
>pdb|3U9S|A Chain A, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|C Chain C, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|E Chain E, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|G Chain G, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|I Chain I, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|K Chain K, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9T|A Chain A, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Free Enzyme
Length = 655
Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 150/511 (29%), Positives = 243/511 (47%), Gaps = 75/511 (14%)
Query: 46 KPIHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQF 105
+ I +L+AN G A + +RS R A+ + ++A D+ +A H+ AD
Sbjct: 6 RSIQRLLVANRGEIACRVMRSAR-----------ALGIGSVAVHSDIDRHARHVAEADIA 54
Query: 106 VEVPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPAT 165
V++ G ++Y I+ A + A+ PG+G SE + G++FLGPPA
Sbjct: 55 VDLGGAKPADSYLRGDRIIAAALASGAQAIHPGYGFLSENADFARACEEAGLLFLGPPAA 114
Query: 166 SMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIAS 225
++ A+G K + + + A VP +P G H + L T + R
Sbjct: 115 AIDAMGSKSAAKALMEEAGVPLVP--GYHGEA---QDLETFRREAGR------------- 156
Query: 226 CQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQSR 281
+GYP ++KA+ GGGGKG++ V + E+ Q E + + + K + R
Sbjct: 157 ---IGYPVLLKAAAGGGGKGMKVVEREAELAEALSSAQREAKAAFGDARMLVEKYLLKPR 213
Query: 282 HLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCVN 341
H+E+Q+ D++G+ L+ RDCS+QRRHQK++EE P E + + +AA R A+ +
Sbjct: 214 HVEIQVFADRHGHCLYLNERDCSIQRRHQKVVEEAPAPGLGAELRRAMGEAAVRAAQAIG 273
Query: 342 YVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMG--IPLWQI 399
YVGA TVE+L E G+++F+E+N RLQVEHPVTE I ++L A Q+ V G +PL Q
Sbjct: 274 YVGAGTVEFLLD-ERGQFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVARGEALPLTQ- 331
Query: 400 PEIRRFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTS 459
E GH + VR+ +EDP+ F P S
Sbjct: 332 ---------------------------------EQVPLNGHAIEVRLYAEDPEGDFLPAS 358
Query: 460 GKVQEL-SFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQ 518
G++ + P V+ G + F D + A+GE+R A ++ L E
Sbjct: 359 GRLMLYREAAAGPGRRVDSGVREGDEVSPFYDPMLAKLIAWGETREEARQRLLAMLAETS 418
Query: 519 IRGEIRTNVDYTIDLLHASDYRENKIHTGWL 549
+ G +RTN+ + +L + ++ TG++
Sbjct: 419 V-GGLRTNLAFLRRILGHPAFAAAELDTGFI 448
>pdb|1ULZ|A Chain A, Crystal Structure Of The Biotin Carboxylase Subunit Of
Pyruvate Carboxylase
Length = 451
Score = 176 bits (447), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 229/507 (45%), Gaps = 71/507 (14%)
Query: 48 IHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFVE 107
++ +L+AN G AV+ IR+ + T +A ++ A H+++AD+
Sbjct: 2 VNKVLVANRGEIAVRIIRACKELGIPT-----------VAIYNEVESTARHVKLADEAYM 50
Query: 108 VPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPATSM 167
+ G + Y N Q I+ +A DA+ PG+G +E E GI F+GP +
Sbjct: 51 I-GTDPLDTYLNKQRIINLALEVGADAIHPGYGFLAENAEFAKMCEEAGITFIGPHWKVI 109
Query: 168 AALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIASCQ 227
+GDK S + + A VP +P S +K + EEA A +
Sbjct: 110 ELMGDKARSKEVMKKAGVPVVPGSDGVLK---------------------SLEEAKALAR 148
Query: 228 VVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQSRHL 283
+GYP ++KA+ GGGG+GIR N++E+ ++Q E + + + K +H+
Sbjct: 149 EIGYPVLLKATAGGGGRGIRICRNEEELVKNYEQASREAEKAFGRGDLLLEKFIENPKHI 208
Query: 284 EVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCVNYV 343
E Q+L D++GNV L RDCS+QRR+QK++E P + E + + AK + Y
Sbjct: 209 EYQVLGDKHGNVIHLGERDCSIQRRNQKLVEIAPSLILTPEKREYYGNIVTKAAKEIGYY 268
Query: 344 GAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIPEIR 403
A T+E++ E G YF+E+N R+QVEHPV+E + I++ Q+ + G PL
Sbjct: 269 NAGTMEFIADQE-GNLYFIEMNTRIQVEHPVSEMVTGIDIVKWQIKIAAGEPLTI----- 322
Query: 404 RFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSGKVQ 463
+ E + G+ + R+ +EDP F P++ ++
Sbjct: 323 ---------------------------KQEDVKFNGYAIECRINAEDPKKNFAPSTRVIE 355
Query: 464 ELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIRGEI 523
+ + G + + DS + + + A+ M L+ +I G +
Sbjct: 356 RYYVPGGFGIRVEHAAARGFEVTPYYDSMIAKLITWAPTWDEAVERMRAALETYEITG-V 414
Query: 524 RTNVDYTIDLLHASDYRENKIHTGWLD 550
+T + I+++ D++ K T +L+
Sbjct: 415 KTTIPLLINIMKEKDFKAGKFTTKYLE 441
>pdb|3OUZ|A Chain A, Crystal Structure Of Biotin Carboxylase-Adp Complex From
Campylobacter Jejuni
pdb|3OUZ|B Chain B, Crystal Structure Of Biotin Carboxylase-Adp Complex From
Campylobacter Jejuni
pdb|3OUU|A Chain A, Crystal Structure Of Biotin Carboxylase-Beta-Gamma-Atp
Complex From Campylobacter Jejuni
pdb|3OUU|B Chain B, Crystal Structure Of Biotin Carboxylase-Beta-Gamma-Atp
Complex From Campylobacter Jejuni
Length = 446
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 229/506 (45%), Gaps = 72/506 (14%)
Query: 48 IHSILIANNGMAAVKFIRSIRTWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFVE 107
I SILIAN G A++ +R+I+ +KAI + + A + + +++ AD +
Sbjct: 6 IKSILIANRGEIALRALRTIKEXG------KKAICVYSEADKDAL-----YLKYADASIC 54
Query: 108 VPGGTNNNNYANVQLIVEMAEMTRVDAVWPGWGHASEIPELPDTLSTKGIIFLGPPATSM 167
+ ++ +Y N+ I+ AE+ DA++PG+G SE + + I F+GP +
Sbjct: 55 IGKARSSESYLNIPAIIAAAEIAEADAIFPGYGFLSENQNFVEICAKHNIKFIGPSVEAX 114
Query: 168 AALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIASCQ 227
DK + + Q A VP +P S + E A +
Sbjct: 115 NLXSDKSKAKQVXQRAGVPVIPGS---------------------DGALAGAEAAKKLAK 153
Query: 228 VVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQSRHL 283
+GYP ++KA+ GGGG+G R V N+ ++ + + E + + K RH+
Sbjct: 154 EIGYPVILKAAAGGGGRGXRVVENEKDLEKAYWSAESEAXTAFGDGTXYXEKYIQNPRHI 213
Query: 284 EVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCVNYV 343
EVQ++ D +GNV + RDCS QRRHQK+IEE P + +T +L + A + AK + Y
Sbjct: 214 EVQVIGDSFGNVIHVGERDCSXQRRHQKLIEESPAILLDEKTRTRLHETAIKAAKAIGYE 273
Query: 344 GAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIPEIR 403
GA T E+L ++YF+E N RLQVEH V+E ++ I++ + V G + +P
Sbjct: 274 GAGTFEFLVDKNL-DFYFIEXNTRLQVEHCVSEXVSGIDIIEQXIKVAEG---YALP--- 326
Query: 404 RFYGMEHGGVYDAWRKTSVIATPFDFDQAESTRPKGHCVAVRVTSEDPDDGFKPTSGKVQ 463
ES + GH + R+T+ED F P+ GK+
Sbjct: 327 ---------------------------SQESIKLNGHSIECRITAEDSKT-FLPSPGKIT 358
Query: 464 ELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIRGEI 523
+ + NV + + DS G + + E R AIA + L E+ I G I
Sbjct: 359 KYIPPAGRNVRXESHCYQDYSVPAYYDSXIGKLVVWAEDRNKAIAKXKVALDELLISG-I 417
Query: 524 RTNVDYTIDLLHASDYRENKIHTGWL 549
+T D+ + D+ N T +L
Sbjct: 418 KTTKDFHLSXXENPDFINNNYDTNYL 443
>pdb|2DN8|A Chain A, Solution Structure Of Rsgi Ruh-053, An Apo-Biotin Carboxy
Carrier Protein From Human Transcarboxylase
Length = 100
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%)
Query: 678 TCLLQNDHDPSKLVAETPCKLLRYLVSDGSHIDADTPYAEVEVMKMCMPLLSPASGVLQF 737
TC+ + ++DP+ L + + KL +Y V DG H++A + YAE+EVMKM M L G +++
Sbjct: 8 TCVFEKENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKY 67
Query: 738 KMAEGQAMQAGELIARLDLDDPSAVRKAEPFYG 770
G ++AG ++ARL+LDDPS V + P G
Sbjct: 68 IKRPGAVLEAGCVVARLELDDPSKVHPSGPSSG 100
>pdb|1X0U|A Chain A, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|B Chain B, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|C Chain C, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|D Chain D, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|E Chain E, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|F Chain F, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
Length = 522
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 167/399 (41%), Gaps = 53/399 (13%)
Query: 1681 VYLTPEDYARIGSS---------VIAHEMKLESGETRWVVDSIVGKEDGLGVENLTGSGA 1731
V+ +D+ +G S V A+E+ L+ G ++ G G +L G GA
Sbjct: 93 VFAYAQDFTVLGGSLGETHANKIVRAYELALKVGAPVVGINDSGGARIQEGALSLEGYGA 152
Query: 1732 IAGAYSRAYKETFTLTYVTGRTVGIGAYLARLG--MRCIQRLDQPIILTGFSALNKLLGR 1789
+ A +T + G G Y L + I+ + +TG +LG
Sbjct: 153 VFKMNVMASGVIPQITIMAGPAAGGAVYSPALTDFIIMIKGDAYYMFVTGPEITKVVLGE 212
Query: 1790 EVYSSHMQLGGPKIMAT-NGVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPP 1848
EV S LGG + AT +GVVH V + E I+ + LSY+P + P I DP
Sbjct: 213 EV--SFQDLGGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYLPSNNMEEPPYIDTGDPA 270
Query: 1849 DRPV----EYLPENSCDPRAAICGFLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARL 1904
DR + +P ++ P N + I I D F+E + WA+ ++ G AR+
Sbjct: 271 DRDATGVEQIVPNDAAKPY--------NMREIIYKIVDNGEFLEVHKHWAQNIIVGFARI 322
Query: 1905 GGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNREEL 1964
G VGIVA + G +D D+A K A+ + + +
Sbjct: 323 AGNVVGIVANNPEEF-------GGSIDI--------------DAADKAARFIRFCDAFNI 361
Query: 1965 PLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDS 2024
PL L + G+ G ++GI++ G+ ++ P I + + GGA + +
Sbjct: 362 PLISLVDTPGYVPGTDQEYKGIIRHGAKMLYAFAEATVPKITVI--VRKSYGGAHIAMSI 419
Query: 2025 R-INSDHIEMYADRTAKGNVLEPEGMIEIKFRTKELLEC 2062
+ + +D + YA TA+ V PEG + I +R KE+ +
Sbjct: 420 KSLGADLV--YAWPTAEIAVTGPEGAVRILYR-KEIQQA 455
>pdb|3N6R|B Chain B, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|D Chain D, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|F Chain F, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|H Chain H, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|J Chain J, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|L Chain L, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
Length = 531
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 184/462 (39%), Gaps = 65/462 (14%)
Query: 1681 VYLTPEDYARIGSSVIAH---------EMKLESGETRWVVDSIVGKEDGLGVENLTGSGA 1731
VY+ +D+ +G SV +M +++G ++ G GV++L G G
Sbjct: 107 VYVFSQDFTVLGGSVSETHSKKICKIMDMAMQNGAPVIGINDSGGARIQEGVDSLAGYGE 166
Query: 1732 IAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQP-IILTGFSALNKLLGRE 1790
+ A ++ + G G Y + D + +TG + + +
Sbjct: 167 VFQRNIMASGVVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPDVVKTVTNEQ 226
Query: 1791 VYSSHMQLGGPKIMA-TNGVVHLTVSDDLEGISAILKWLSYVPPHIGGALPIISPLDPPD 1849
V S +LGG + V +D+E ++ + + + ++P + P+ D PD
Sbjct: 227 V--SAEELGGATTHTRKSSVADAAFENDVEALAEVRRLVDFLPLNNREKPPVRPFFDDPD 284
Query: 1850 RPVEYL----PENSCDPRAAICGFLDNNGKWIGGIFDKDSFVETLEGWARTVVTGRARLG 1905
R L P+N P + + I + D+ F E E +A+ ++TG RL
Sbjct: 285 RIEPSLDTLVPDNPNTPY--------DMKELIHKLADEGDFYEIQEEFAKNIITGFIRLE 336
Query: 1906 GIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQALMDFNREELP 1965
G VG+VA + + G LD DS+ K A+ + + E+P
Sbjct: 337 GRTVGVVANQPLVLA-------GCLDI--------------DSSRKAARFVRFCDAFEIP 375
Query: 1966 LFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMAELRGGAWVVVDSR 2025
L L + GF G + G+++ G+ ++ P+ I A GGA+VV+ S+
Sbjct: 376 LLTLIDVPGFLPGTSQEYGGVIKHGAKLLYAYGEATVPMVTVITRKA--YGGAYVVMSSK 433
Query: 2026 -INSDHIEMYADRTAKGNVLEPEGMIEIKFRTKELLECMGRLD--QKLIDLMAKLQEAKN 2082
+ +D YA TA+ V+ +G EI R G L +K+ A +E
Sbjct: 434 HLRADF--NYAWPTAEVAVMGAKGATEIIHR--------GDLGDPEKIAQHTADYEERFA 483
Query: 2083 NRTLAMVESLQQQIKAREKQLLPTYTQVATKFAELHDTSLRM 2124
N +A ++ Q T +VA FA L + S++M
Sbjct: 484 NPFVASERGFVDEV----IQPRSTRKRVARAFASLRNKSVQM 521
>pdb|1VRG|A Chain A, Crystal Structure Of Propionyl-coa Carboxylase, Beta Subunit
(tm0716) From Thermotoga Maritima At 2.30 A Resolution
pdb|1VRG|B Chain B, Crystal Structure Of Propionyl-coa Carboxylase, Beta Subunit
(tm0716) From Thermotoga Maritima At 2.30 A Resolution
pdb|1VRG|C Chain C, Crystal Structure Of Propionyl-coa Carboxylase, Beta Subunit
(tm0716) From Thermotoga Maritima At 2.30 A Resolution
pdb|1VRG|D Chain D, Crystal Structure Of Propionyl-coa Carboxylase, Beta Subunit
(tm0716) From Thermotoga Maritima At 2.30 A Resolution
pdb|1VRG|E Chain E, Crystal Structure Of Propionyl-coa Carboxylase, Beta Subunit
(tm0716) From Thermotoga Maritima At 2.30 A Resolution
pdb|1VRG|F Chain F, Crystal Structure Of Propionyl-coa Carboxylase, Beta Subunit
(tm0716) From Thermotoga Maritima At 2.30 A Resolution
Length = 527
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 139/344 (40%), Gaps = 49/344 (14%)
Query: 1722 GVENLTGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQP--IILTG 1779
GV+ L G G I + A +T + G G Y L I +DQ +TG
Sbjct: 150 GVDALAGYGEIFLRNTLASGVVPQITVIAGPCAGGAVYSPAL-TDFIVXVDQTARXFITG 208
Query: 1780 FSALNKLLGREVYSSHMQLGGPKIM-ATNGVVHLTVSDDLEGISAILKWLSYVPPHIGGA 1838
+ + + G E+ S LGG + +G H +D + S + LSY+P +
Sbjct: 209 PNVIKAVTGEEI--SQEDLGGAXVHNQKSGNAHFLADNDEKAXSLVRTLLSYLPSNNAEE 266
Query: 1839 LPIISP---LDPPDRPVEYLPEN---SCDPRAAICGFLDNNGKWIGGIFDKDSFVETLEG 1892
P+ P L+ P+ ++ LP+N D R I +D+ F E
Sbjct: 267 PPVEDPDTSLETPEDILDILPDNPNKGYDVRDVIKRVVDHG-----------EFFEVQPY 315
Query: 1893 WARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKT 1952
+A+ +V G AR+ G VGIVA + + V+ +DS D A +
Sbjct: 316 FAKNIVIGFARIQGKTVGIVANQPSVLAGVL-----DIDSS-------------DKAARF 357
Query: 1953 AQALMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYIPMMA 2012
+ L FN +P+ + G+ G GI++ G+ ++ P I +
Sbjct: 358 IRFLDAFN---IPILTFVDTPGYLPGVAQEHGGIIRHGAKLLYAYSEATVPKITVI--LR 412
Query: 2013 ELRGGAWVVVDSR-INSDHIEMYADRTAKGNVLEPEGMIEIKFR 2055
+ GGA++ S+ + +D + + +A+ V PEG I F+
Sbjct: 413 KAYGGAYIAXGSKHLGADXVLAWP--SAEIAVXGPEGAANIIFK 454
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 1603 SGRTILIVANDVTFKAGSFGPREDAFFLAVTDLACAKKLPLIYLAANSGARI 1654
+GR + + + D T GS G + + DLA +P+I + + GARI
Sbjct: 96 NGRKVAVFSQDFTVXGGSLGEXHAKKIVKLLDLALKXGIPVIGINDSGGARI 147
>pdb|2BZR|A Chain A, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa Carboxylase
Beta-Subunit From Mycobacterium Tuberculosis
pdb|2BZR|B Chain B, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa Carboxylase
Beta-Subunit From Mycobacterium Tuberculosis
pdb|2BZR|C Chain C, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa Carboxylase
Beta-Subunit From Mycobacterium Tuberculosis
pdb|2BZR|D Chain D, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa Carboxylase
Beta-Subunit From Mycobacterium Tuberculosis
pdb|2BZR|E Chain E, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa Carboxylase
Beta-Subunit From Mycobacterium Tuberculosis
pdb|2BZR|F Chain F, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa Carboxylase
Beta-Subunit From Mycobacterium Tuberculosis
Length = 548
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 134/329 (40%), Gaps = 49/329 (14%)
Query: 1714 IVGKEDGLGVENLTGSGAIAGAYSRAYKETF-------TLTYVTGRTVGIGAYLARLGMR 1766
++G DG G G ++ G YSR ++ ++ + G G Y L
Sbjct: 146 LIGINDGAGARIQEGVVSL-GLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPALTDF 204
Query: 1767 CIQRLDQP--IILTGFSALNKLLGREVYSSHMQLGGPKI-MATNGVVHLTVSDDLEGISA 1823
I +DQ + +TG + + G EV + +LGG MA +G H S + +
Sbjct: 205 VIM-VDQTSQMFITGPDVIKTVTGEEV--TMEELGGAHTHMAKSGTAHYAASGEQDAFDY 261
Query: 1824 ILKWLSYVPPHIGGALPIISPLDPPDRPVEYLPENSCDPRAAICGFLDNN-------GKW 1876
+ + LSY+PP+ P P P+E EN D + + ++ +
Sbjct: 262 VRELLSYLPPNNSTDAPRYQAA-APTGPIE---ENLTDEDLELDTLIPDSPNQPYDMHEV 317
Query: 1877 IGGIFDKDSFVETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERV 1936
I + D D F+E G+A+ +V G R+ G PVGIVA + G LD
Sbjct: 318 ITRLLD-DEFLEIQAGYAQNIVVGFGRIDGRPVGIVANQPTHFA-------GCLDI---- 365
Query: 1937 VPQAGQVWFPDSATKTAQALMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVEN 1996
+++ K A+ + + +P+ +L + GF G + GI++ G+ ++
Sbjct: 366 ----------NASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGIIRRGAKLLYA 415
Query: 1997 LRTYKQPVFVYIPMMAELRGGAWVVVDSR 2025
P I A GGA+ V+ S+
Sbjct: 416 YGEATVPKITVITRKA--YGGAYCVMGSK 442
>pdb|2A7S|A Chain A, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
pdb|2A7S|B Chain B, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
pdb|2A7S|C Chain C, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
pdb|2A7S|D Chain D, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
pdb|2A7S|E Chain E, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
pdb|2A7S|F Chain F, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
Length = 548
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 134/329 (40%), Gaps = 49/329 (14%)
Query: 1714 IVGKEDGLGVENLTGSGAIAGAYSRAYKETF-------TLTYVTGRTVGIGAYLARLGMR 1766
++G DG G G ++ G YSR ++ ++ + G G Y L
Sbjct: 146 LIGINDGAGARIQEGVVSL-GLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPALTDF 204
Query: 1767 CIQRLDQP--IILTGFSALNKLLGREVYSSHMQLGGPKI-MATNGVVHLTVSDDLEGISA 1823
I +DQ + +TG + + G EV + +LGG MA +G H S + +
Sbjct: 205 VIM-VDQTSQMFITGPDVIKTVTGEEV--TMEELGGAHTHMAKSGTAHYAASGEQDAFDY 261
Query: 1824 ILKWLSYVPPHIGGALPIISPLDPPDRPVEYLPENSCDPRAAICGFLDNN-------GKW 1876
+ + LSY+PP+ P P P+E EN D + + ++ +
Sbjct: 262 VRELLSYLPPNNSTDAPRYQAA-APTGPIE---ENLTDEDLELDTLIPDSPNQPYDMHEV 317
Query: 1877 IGGIFDKDSFVETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERV 1936
I + D D F+E G+A+ +V G R+ G PVGIVA + G LD
Sbjct: 318 ITRLLD-DEFLEIQAGYAQNIVVGFGRIDGRPVGIVANQPTHFA-------GCLDI---- 365
Query: 1937 VPQAGQVWFPDSATKTAQALMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVEN 1996
+++ K A+ + + +P+ +L + GF G + GI++ G+ ++
Sbjct: 366 ----------NASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGIIRRGAKLLYA 415
Query: 1997 LRTYKQPVFVYIPMMAELRGGAWVVVDSR 2025
P I A GGA+ V+ S+
Sbjct: 416 YGEATVPKITVITRKA--YGGAYCVMGSK 442
>pdb|2KCC|A Chain A, Solution Structure Of Biotinoyl Domain From Human Acetyl-
Coa Carboxylase 2
Length = 84
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 684 DHDPSKLVAETPCKLLRYLVSDGSHIDADTPYAEVEVMKMCMPLLSPASGVLQFKMAEGQ 743
++DP+ L + + KL +Y V DG H++A + YAE+EVMKM M L G +++ G
Sbjct: 2 ENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKYIKRPGA 61
Query: 744 AMQAGELIAR 753
++AG ++AR
Sbjct: 62 VLEAGCVVAR 71
>pdb|1ON3|A Chain A, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON3|B Chain B, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON3|C Chain C, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON3|D Chain D, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON3|E Chain E, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON3|F Chain F, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON9|A Chain A, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (with Hydrolyzed
Methylmalonyl-coenzyme A Bound)
pdb|1ON9|B Chain B, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (with Hydrolyzed
Methylmalonyl-coenzyme A Bound)
pdb|1ON9|C Chain C, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (with Hydrolyzed
Methylmalonyl-coenzyme A Bound)
pdb|1ON9|D Chain D, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (with Hydrolyzed
Methylmalonyl-coenzyme A Bound)
pdb|1ON9|E Chain E, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (with Hydrolyzed
Methylmalonyl-coenzyme A Bound)
pdb|1ON9|F Chain F, Transcarboxylase 12s Crystal Structure: Hexamer Assembly And
Substrate Binding To A Multienzyme Core (with Hydrolyzed
Methylmalonyl-coenzyme A Bound)
Length = 523
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 144/348 (41%), Gaps = 51/348 (14%)
Query: 1722 GVENLTGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFS 1781
G+++L+G G + A + + + G G +Y L I + +TG
Sbjct: 147 GIDSLSGYGKMFFANVKLSGVVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFITGPQ 206
Query: 1782 ALNKLLGREVYSSHMQLGGPKI-MATNGVVHLTVSDDLEGISAILKWLSYVPPHIGGALP 1840
+ + G +V + +LGG + MA +G +H DD K LS++P +
Sbjct: 207 VIKSVTGEDVTAD--ELGGAEAHMAISGNIHFVAEDDDAAELIAKKLLSFLPQNNTEEAS 264
Query: 1841 IISPLDPPDRPVEYLPENSCDPRAAICGFLDNNGK-------WIGGIFDKDSFVETLEGW 1893
++P N P + + +GK I I D ++E G+
Sbjct: 265 FVNP------------NNDVSPNTELRDIVPIDGKKGYDVRDVIAKIVDWGDYLEVKAGY 312
Query: 1894 ARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTA 1953
A +VT AR+ G VGIVA + +VM G LD + D A +
Sbjct: 313 ATNLVTAFARVNGRSVGIVANQP-SVMS------GCLD-----------INASDKAAEFV 354
Query: 1954 QALMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYIP-MMA 2012
FN +PL L + GF G + + GI++ G+ + L Y + I ++
Sbjct: 355 NFCDSFN---IPLVQLVDVPGFLPGVQQEYGGIIRHGAKM---LYAYSEATVPKITVVLR 408
Query: 2013 ELRGGAWVVVDSR-INSDHIEMYADRTAKGNVLEPEGMIEIKFRTKEL 2059
+ GG+++ + +R + +D + YA +A+ V+ EG + FR KE+
Sbjct: 409 KAYGGSYLAMCNRDLGADAV--YAWPSAEIAVMGAEGAANVIFR-KEI 453
>pdb|1CE8|A Chain A, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|C Chain C, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|E Chain E, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|G Chain G, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1M6V|A Chain A, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
pdb|1M6V|C Chain C, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
pdb|1M6V|E Chain E, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
pdb|1M6V|G Chain G, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
Length = 1073
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 212 RQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPI 271
R +T EEA+A VG+P +I+ S+ GG G +N +E + + P +
Sbjct: 145 RSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKEL 204
Query: 272 FIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEG-PITVAPLETVKKLE 330
I + + E++++ D+ N + CS++ I G ITVAP +T+ E
Sbjct: 205 LIDESLIGWKEYEMEVVRDKNDNCIIV----CSIENFDAMGIHTGDSITVAPAQTLTDKE 260
Query: 331 QAARRLAKCVNY------VGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLP 384
R A G + V++ + + G +E+NPR+ + P
Sbjct: 261 YQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALAS--KATGFP 318
Query: 385 AAQVAVGMGI 394
A+VA + +
Sbjct: 319 IAKVAAKLAV 328
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 213 QACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIF 272
A V E A+ + +GYP +++ S+ GG+ + V+++ ++R F+ +P+
Sbjct: 692 NATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVL 751
Query: 273 IMKVASQSRHLEVQLLCD----------QYGNVAALHSRD--CSVQRRHQKIIEEGPITV 320
+ + ++V +CD ++ A +HS D CS+ P
Sbjct: 752 LDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSL-----------PAYT 800
Query: 321 APLETVKKLEQAARRLAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAE 380
E + Q ++LA + G V+ ++++ E Y +E+NPR P
Sbjct: 801 LSQEIQDVMRQQVQKLAFELQVRGLMNVQ--FAVKNNEVYLIEVNPRAARTVPFVS--KA 856
Query: 381 INLPAAQVA 389
+P A+VA
Sbjct: 857 TGVPLAKVA 865
>pdb|1JDB|B Chain B, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|E Chain E, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|H Chain H, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|K Chain K, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1BXR|A Chain A, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|C Chain C, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|E Chain E, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|G Chain G, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1C30|A Chain A, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|C Chain C, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|E Chain E, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|G Chain G, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C3O|A Chain A, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|C Chain C, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|E Chain E, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|G Chain G, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1CS0|A Chain A, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|C Chain C, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|E Chain E, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|G Chain G, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1KEE|A Chain A, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|C Chain C, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|E Chain E, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|G Chain G, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1T36|A Chain A, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|C Chain C, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|E Chain E, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|G Chain G, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
Length = 1073
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 212 RQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPI 271
R +T EEA+A VG+P +I+ S+ GG G +N +E + + P +
Sbjct: 145 RSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKEL 204
Query: 272 FIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEG-PITVAPLETVKKLE 330
I + + E++++ D+ N + CS++ I G ITVAP +T+ E
Sbjct: 205 LIDESLIGWKEYEMEVVRDKNDNCIIV----CSIENFDAMGIHTGDSITVAPAQTLTDKE 260
Query: 331 QAARRLAKCVNY------VGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLP 384
R A G + V++ + + G +E+NPR+ + P
Sbjct: 261 YQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALAS--KATGFP 318
Query: 385 AAQVAVGMGI 394
A+VA + +
Sbjct: 319 IAKVAAKLAV 328
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 213 QACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIF 272
A V E A+ + +GYP +++ S+ GG+ + V+++ ++R F+ +P+
Sbjct: 692 NATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVL 751
Query: 273 IMKVASQSRHLEVQLLCD----------QYGNVAALHSRD--CSVQRRHQKIIEEGPITV 320
+ + ++V +CD ++ A +HS D CS+ P
Sbjct: 752 LDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSL-----------PAYT 800
Query: 321 APLETVKKLEQAARRLAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAE 380
E + Q ++LA + G V+ ++++ E Y +E+NPR P
Sbjct: 801 LSQEIQDVMRQQVQKLAFELQVRGLMNVQ--FAVKNNEVYLIEVNPRAARTVPFVS--KA 856
Query: 381 INLPAAQVA 389
+P A+VA
Sbjct: 857 TGVPLAKVA 865
>pdb|1A9X|A Chain A, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
pdb|1A9X|C Chain C, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
pdb|1A9X|E Chain E, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
pdb|1A9X|G Chain G, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
Length = 1073
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 212 RQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPI 271
R +T EEA+A VG+P +I+ S+ GG G +N +E + + P +
Sbjct: 145 RSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKEL 204
Query: 272 FIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEG-PITVAPLETVKKLE 330
I + + E++++ D+ N + CS++ I G ITVAP +T+ E
Sbjct: 205 LIDESLIGWKEYEMEVVRDKNDNCIIV----CSIENFDAMGIHTGDSITVAPAQTLTDKE 260
Query: 331 QAARRLAKCVNY------VGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLP 384
R A G + V++ + + G +E+NPR+ + P
Sbjct: 261 YQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALAS--KATGFP 318
Query: 385 AAQVAVGMGI 394
A+VA + +
Sbjct: 319 IAKVAAKLAV 328
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 213 QACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIF 272
A V E A+ + +GYP +++AS+ GG+ + V+++ ++R F+ +P+
Sbjct: 692 NATVTAIEMAVEKAKEIGYPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVL 751
Query: 273 IMKVASQSRHLEVQLLCD----------QYGNVAALHSRD--CSVQRRHQKIIEEGPITV 320
+ + ++V +CD ++ A +HS D CS+ P
Sbjct: 752 LDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSL-----------PAYT 800
Query: 321 APLETVKKLEQAARRLAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAE 380
E + Q ++LA + G V+ ++++ E Y +E+NPR P
Sbjct: 801 LSQEIQDVMRQQVQKLAFELQVRGLMNVQ--FAVKNNEVYLIEVNPRAARTVPFVS--KA 856
Query: 381 INLPAAQVA 389
+P A+VA
Sbjct: 857 TGVPLAKVA 865
>pdb|3IAV|A Chain A, Propionyl-Coa Carboxylase Beta Subunit, D422v
pdb|3IAV|B Chain B, Propionyl-Coa Carboxylase Beta Subunit, D422v
Length = 530
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 40/258 (15%)
Query: 1775 IILTGFSALNKLLGREVYSSHMQLGGPKIM-ATNGVVHLTVSDDLEGISAILKWLSYVPP 1833
+ +TG + + G +V +LGG + +T+GV H D+ + + + + LSY+P
Sbjct: 203 MFITGPDVIKTVTGEDV--GFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLPS 260
Query: 1834 HIGG---ALPIISPLDPPDRPVEY---LPENSCDPRAAICGFLDNNGKWIGGIFDKDSFV 1887
+ A P + L D E +P+++ P + I + D F
Sbjct: 261 NNLSEPPAFPEEADLAVTDEDAELDTIVPDSANQPY--------DMHSVIEHVLDDAEFF 312
Query: 1888 ETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPD 1947
ET +A ++TG R+ G PVGIVA + MQ G LD + +
Sbjct: 313 ETQPLFAPNILTGFGRVEGRPVGIVANQP---MQFA----GCLD-----------ITASE 354
Query: 1948 SATKTAQALMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVY 2007
A + + FN +P+ + GF G +GI++ G+ ++ P+
Sbjct: 355 KAARFVRTCDAFN---VPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITV 411
Query: 2008 IPMMAELRGGAWVVVDSR 2025
I A GGA+VV+ S+
Sbjct: 412 ITRKA--FGGAYVVMGSK 427
>pdb|1XNW|A Chain A, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #2, Mutant D422i
pdb|1XNW|B Chain B, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #2, Mutant D422i
pdb|1XNW|C Chain C, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #2, Mutant D422i
pdb|1XNW|D Chain D, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #2, Mutant D422i
pdb|1XNW|E Chain E, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #2, Mutant D422i
pdb|1XNW|F Chain F, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #2, Mutant D422i
Length = 530
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 40/258 (15%)
Query: 1775 IILTGFSALNKLLGREVYSSHMQLGGPKIM-ATNGVVHLTVSDDLEGISAILKWLSYVPP 1833
+ +TG + + G +V +LGG + +T+GV H D+ + + + + LSY+P
Sbjct: 203 MFITGPDVIKTVTGEDV--GFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLPS 260
Query: 1834 HIGG---ALPIISPLDPPDRPVEY---LPENSCDPRAAICGFLDNNGKWIGGIFDKDSFV 1887
+ A P + L D E +P+++ P + I + D F
Sbjct: 261 NNLSEPPAFPEEADLAVTDEDAELDTIVPDSANQPY--------DMHSVIEHVLDDAEFF 312
Query: 1888 ETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPD 1947
ET +A ++TG R+ G PVGIVA + MQ G LD + +
Sbjct: 313 ETQPLFAPNILTGFGRVEGRPVGIVANQP---MQFA----GCLD-----------ITASE 354
Query: 1948 SATKTAQALMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVY 2007
A + + FN +P+ + GF G +GI++ G+ ++ P+
Sbjct: 355 KAARFVRTCDAFN---VPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITV 411
Query: 2008 IPMMAELRGGAWVVVDSR 2025
I A GGA++V+ S+
Sbjct: 412 ITRKA--FGGAYIVMGSK 427
>pdb|3GF3|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Glutaconyl-Coa
pdb|3GF7|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Apoprotein
pdb|3GLM|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GLM|B Chain B, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GLM|C Chain C, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GLM|D Chain D, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GMA|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Glutaryl-Coa
pdb|3GMA|B Chain B, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Glutaryl-Coa
Length = 588
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 152/415 (36%), Gaps = 86/415 (20%)
Query: 1604 GRTILIVANDVTFKAGSFGPREDAFFLAVTDLACAKKLPLIYLAANSGARIGVAEEVKAC 1663
G+ + IVA+D AG++ P + + +D A LPLIYL SG
Sbjct: 105 GKWVYIVASDNKKMAGAWVPGQAENLIRCSDAAKMMHLPLIYLLNCSGV----------- 153
Query: 1664 FEIGWTDELNPDRGFNYVYLTPEDYARIGSSVIAHEMKLESGETRWVVDSIVGKEDGLGV 1723
E D++ P+R R G + +L + + IVG
Sbjct: 154 -EFPNQDKVYPNR-------------RGGGTPFFRNSEL----NQLGIPVIVG------- 188
Query: 1724 ENLTGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSAL 1783
+ G+ G Y VG L+ GM +D A
Sbjct: 189 --IYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILS--GMNPKGYIDD-------EAA 237
Query: 1784 NKLLGREVYSSHMQLGGPKIMATN----GVVHLTVSDDLEGISAILKWLSYVPPHIGGAL 1839
+++ ++ +S +++ P + + G +DL I I K++SY+P +
Sbjct: 238 EQIIAAQIENSKLKVPAPGSVPIHYDETGFFREVYQNDLGVIDGIKKYISYLPAYNLEFF 297
Query: 1840 PIISPLDPPDRPVEYL----PENSCDPRAAICGFLDNNGKWIGGIFDKDSFVETLEGWAR 1895
+ +P P P E L P N P + I +FD F E +G+
Sbjct: 298 RVDTP-KAPQLPAEDLYSIIPMNQKRPYDIY--------EVIARLFDNSEFSEYKKGYGP 348
Query: 1896 TVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQA 1955
+VTG A++ G+ VG++A Q ++ P + + V G+++ Q
Sbjct: 349 EMVTGLAKVNGLLVGVIA-NVQGLLMNYP------EYKQNSVGIGGKLY--------RQG 393
Query: 1956 LMDFN-------REELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQP 2003
L+ N R+ +PL L + G G +L G +++ ++ K P
Sbjct: 394 LIKMNEFVTLCARDRIPLIWLQDTTGIDVGDEAEKAELLGLGQSLIYSIENSKLP 448
>pdb|3IB9|A Chain A, Propionyl-Coa Carboxylase Beta Subunit, D422l
pdb|3IB9|B Chain B, Propionyl-Coa Carboxylase Beta Subunit, D422l
Length = 530
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 40/258 (15%)
Query: 1775 IILTGFSALNKLLGREVYSSHMQLGGPKIM-ATNGVVHLTVSDDLEGISAILKWLSYVPP 1833
+ +TG + + G +V +LGG + +T+GV H D+ + + + + LSY+P
Sbjct: 203 MFITGPDVIKTVTGEDV--GFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLPS 260
Query: 1834 HIGG---ALPIISPLDPPDRPVEY---LPENSCDPRAAICGFLDNNGKWIGGIFDKDSFV 1887
+ A P + L D E +P+++ P + I + D F
Sbjct: 261 NNLSEPPAFPEEADLAVTDEDAELDTIVPDSANQPY--------DMHSVIEHVLDDAEFF 312
Query: 1888 ETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPD 1947
ET +A ++TG R+ G PVGIVA + MQ G LD + +
Sbjct: 313 ETQPLFAPNILTGFGRVEGRPVGIVANQP---MQFA----GCLD-----------ITASE 354
Query: 1948 SATKTAQALMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVY 2007
A + + FN +P+ + GF G +GI++ G+ ++ P+
Sbjct: 355 KAARFVRTCDAFN---VPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITV 411
Query: 2008 IPMMAELRGGAWVVVDSR 2025
I A GGA++V+ S+
Sbjct: 412 ITRKA--FGGAYLVMGSK 427
>pdb|3IBB|A Chain A, Propionyl-Coa Carboxylase Beta Subunit, D422a
pdb|3IBB|B Chain B, Propionyl-Coa Carboxylase Beta Subunit, D422a
pdb|3IBB|C Chain C, Propionyl-Coa Carboxylase Beta Subunit, D422a
pdb|3IBB|D Chain D, Propionyl-Coa Carboxylase Beta Subunit, D422a
pdb|3IBB|E Chain E, Propionyl-Coa Carboxylase Beta Subunit, D422a
pdb|3IBB|F Chain F, Propionyl-Coa Carboxylase Beta Subunit, D422a
Length = 530
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 40/258 (15%)
Query: 1775 IILTGFSALNKLLGREVYSSHMQLGGPKIM-ATNGVVHLTVSDDLEGISAILKWLSYVPP 1833
+ +TG + + G +V +LGG + +T+GV H D+ + + + + LSY+P
Sbjct: 203 MFITGPDVIKTVTGEDV--GFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLPS 260
Query: 1834 HIGG---ALPIISPLDPPDRPVEY---LPENSCDPRAAICGFLDNNGKWIGGIFDKDSFV 1887
+ A P + L D E +P+++ P + I + D F
Sbjct: 261 NNLSEPPAFPEEADLAVTDEDAELDTIVPDSANQPY--------DMHSVIEHVLDDAEFF 312
Query: 1888 ETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPD 1947
ET +A ++TG R+ G PVGIVA + MQ G LD + +
Sbjct: 313 ETQPLFAPNILTGFGRVEGRPVGIVANQP---MQFA----GCLD-----------ITASE 354
Query: 1948 SATKTAQALMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVY 2007
A + + FN +P+ + GF G +GI++ G+ ++ P+
Sbjct: 355 KAARFVRTCDAFN---VPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITV 411
Query: 2008 IPMMAELRGGAWVVVDSR 2025
I A GGA+ V+ S+
Sbjct: 412 ITRKA--FGGAYAVMGSK 427
>pdb|3U9R|B Chain B, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc), Beta Subunit
pdb|3U9S|B Chain B, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|D Chain D, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|F Chain F, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|H Chain H, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|J Chain J, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|L Chain L, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9T|B Chain B, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Free Enzyme
Length = 555
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 136/409 (33%), Gaps = 100/409 (24%)
Query: 1604 GRTILIVANDVTFKAGSFGPREDAFFLAVTDLACAKKLPLIYLAANSGARIGVAEEVKAC 1663
G +IV ND T K G++ P L +A +LP IYL + GA
Sbjct: 120 GVECMIVGNDATVKGGTYYPLTVKKHLRAQAIALENRLPCIYLVDSGGA----------- 168
Query: 1664 FEIGWTDELNPDRGFNYVYLTPEDYARIGSSVIAHEMKLESGETRWVVDSIVGKEDGLGV 1723
+ DE+ PDR E + RI
Sbjct: 169 -NLPRQDEVFPDR---------EHFGRI----------------------------FFNQ 190
Query: 1724 ENLTGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSAL 1783
N++ G + V G GAY+ + + +Q I L
Sbjct: 191 ANMSARG------------IPQIAVVMGSCTAGGAYVPAMSDETVMVREQATIFLAGPPL 238
Query: 1784 NKLLGREVYSSHMQLGGPKIMA-TNGVVHLTVSDDLEGISAILKWLSYVPPHIGGALPI- 1841
K EV S+ +LGG + +GV DD ++ + ++ + G L
Sbjct: 239 VKAATGEVVSAE-ELGGADVHCKVSGVADHYAEDDDHALAIARRCVANLNWRKQGQLQCR 297
Query: 1842 --ISPLDPPDRPVEYLPENSCDPRAAICGFLDNNGKWIGGIFDKDSFVETLEGWARTVVT 1899
+PL P + +P +S P + + I + D F E + T+V
Sbjct: 298 APRAPLYPAEELYGVIPADSKQPY--------DVREVIARLVDGSEFDEFKALFGTTLVC 349
Query: 1900 GRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQALMDF 1959
G A L G P+ I+A + F ++A K A +
Sbjct: 350 GFAHLHGYPIAILANNG--------------------------ILFAEAAQKGAHFIELA 383
Query: 1960 NREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVYI 2008
+ +PL L N GF GQ+ GI + G+ +V + + P F +
Sbjct: 384 CQRGIPLLFLQNITGFMVGQKYEAGGIAKHGAKLVTAVACARVPKFTVL 432
>pdb|3MFM|C Chain C, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
pdb|3MFM|F Chain F, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
pdb|3MFM|A Chain A, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
pdb|3MFM|B Chain B, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
pdb|3MFM|D Chain D, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
pdb|3MFM|E Chain E, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
Length = 530
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 40/258 (15%)
Query: 1775 IILTGFSALNKLLGREVYSSHMQLGGPKIM-ATNGVVHLTVSDDLEGISAILKWLSYVPP 1833
+ +TG + + G +V +LGG + +T+GV H D+ + + + + LSY+P
Sbjct: 203 MFITGPDVIKTVTGEDV--GFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLPS 260
Query: 1834 HIGG---ALPIISPLDPPDRPVEY---LPENSCDPRAAICGFLDNNGKWIGGIFDKDSFV 1887
+ A P + L D E +P+++ P + I + D F
Sbjct: 261 NNLSEPPAFPEEADLAVTDEDAELDTIVPDSANQPY--------DMHSVIEHVLDDAEFF 312
Query: 1888 ETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPD 1947
ET +A ++TG R+ G PVGIVA + MQ G LD + +
Sbjct: 313 ETQPLFAPNILTGFGRVEGRPVGIVANQP---MQFA----GCLD-----------ITASE 354
Query: 1948 SATKTAQALMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVY 2007
A + + FN +P+ + GF G +GI++ G+ ++ P+
Sbjct: 355 KAARFVRTCDAFN---VPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITV 411
Query: 2008 IPMMAELRGGAWVVVDSR 2025
I A GGA+ V+ S+
Sbjct: 412 ITRKA--FGGAYNVMGSK 427
>pdb|1XNV|A Chain A, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #1
pdb|1XNV|B Chain B, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #1
pdb|1XNY|A Chain A, Biotin And Propionyl-coa Bound To Acyl-coa Carboxylase Beta
Subunit From S. Coelicolor (pccb)
pdb|1XNY|B Chain B, Biotin And Propionyl-coa Bound To Acyl-coa Carboxylase Beta
Subunit From S. Coelicolor (pccb)
pdb|1XO6|A Chain A, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #3
pdb|1XO6|B Chain B, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #3
pdb|1XO6|C Chain C, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #3
pdb|1XO6|D Chain D, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #3
pdb|1XO6|E Chain E, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #3
pdb|1XO6|F Chain F, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor (Pccb),
Apo Form #3
Length = 530
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 40/258 (15%)
Query: 1775 IILTGFSALNKLLGREVYSSHMQLGGPKIM-ATNGVVHLTVSDDLEGISAILKWLSYVPP 1833
+ +TG + + G +V +LGG + +T+GV H D+ + + + + LSY+P
Sbjct: 203 MFITGPDVIKTVTGEDV--GFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLPS 260
Query: 1834 HIGG---ALPIISPLDPPDRPVEY---LPENSCDPRAAICGFLDNNGKWIGGIFDKDSFV 1887
+ A P + L D E +P+++ P + I + D F
Sbjct: 261 NNLSEPPAFPEEADLAVTDEDAELDTIVPDSANQPY--------DMHSVIEHVLDDAEFF 312
Query: 1888 ETLEGWARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPD 1947
ET +A ++TG R+ G PVGIVA + MQ G LD + +
Sbjct: 313 ETQPLFAPNILTGFGRVEGRPVGIVANQP---MQFA----GCLD-----------ITASE 354
Query: 1948 SATKTAQALMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVFVY 2007
A + + FN +P+ + GF G +GI++ G+ ++ P+
Sbjct: 355 KAARFVRTCDAFN---VPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITV 411
Query: 2008 IPMMAELRGGAWVVVDSR 2025
I A GGA+ V+ S+
Sbjct: 412 ITRKA--FGGAYDVMGSK 427
>pdb|2CQY|A Chain A, Solution Structure Of B Domain From Human Propionyl-Coa
Carboxylase Alpha Subunit
Length = 108
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 54/122 (44%), Gaps = 25/122 (20%)
Query: 166 SMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQACVYTTEEAIAS 225
S + GDKI S L+A+ A V T+P V EEA+
Sbjct: 2 SSGSSGDKIESKLLAKKAEVNTIPGF---------------------DGVVKDAEEAVRI 40
Query: 226 CQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQSR 281
+ +GYP MIKAS GGGGKG+R +D+E R F+ E S + I K R
Sbjct: 41 AREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAASSFGDDRLLIEKFIDNPR 100
Query: 282 HL 283
H+
Sbjct: 101 HI 102
>pdb|3AW8|A Chain A, Crystal Structure Of N5-Carboxyaminoimidazole
Ribonucleotide Synthetase From Thermus Thermophilus Hb8
pdb|3AW8|B Chain B, Crystal Structure Of N5-Carboxyaminoimidazole
Ribonucleotide Synthetase From Thermus Thermophilus Hb8
Length = 369
Score = 38.9 bits (89), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 90/230 (39%), Gaps = 40/230 (17%)
Query: 155 KGIIFLGPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESCLVTIPDDVYRQA 214
+G + L PPA ++ D++ Q VPT P+ V P+D+
Sbjct: 79 EGRLPLYPPAKALEVAQDRLREKTFFQGLGVPTPPFHP-----------VDGPEDL---- 123
Query: 215 CVYTTEEAIASCQVVGYPAMIKASWGG-GGKGIRKVHNDDEVRALFKQVQGEVPGSPIFI 273
EE + + VG PA++K GG GKG V ++E K + G + +
Sbjct: 124 -----EEGL---KRVGLPALLKTRRGGYDGKGQALVRTEEEALEALKALGGRG----LIL 171
Query: 274 MKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLET---VKKLE 330
R + + + + G VA V+ RH I + AP + KK E
Sbjct: 172 EGFVPFDREVSLLAVRGRTGEVAFY----PLVENRHWGGILRLSLAPAPGASEALQKKAE 227
Query: 331 QAARRLAKCVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAE 380
A R + ++YVG +E+ E E F E+ PR+ H W E
Sbjct: 228 AYALRAMEALDYVGVLALEFFQVGE--ELLFNEMAPRV---HNSGHWTIE 272
>pdb|4E4T|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole
Carboxylase, Atpase Subunit From Burkholderia Ambifaria
pdb|4E4T|B Chain B, Crystal Structure Of Phosphoribosylaminoimidazole
Carboxylase, Atpase Subunit From Burkholderia Ambifaria
Length = 419
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 317 PITVAPLETVKKLEQAARRLAKCVNYVGAATVEYLYSMETGEYYFLELNPR 367
P A V++ +QAA R+A + YVG VE+ + +E G + E+ PR
Sbjct: 254 PAPAADTARVEEAQQAAVRIADTLGYVGVLCVEF-FVLEDGSFVANEMAPR 303
>pdb|4IZO|A Chain A, Crystal Structure Of Kinase Phosphoribosylaminoimidazole
Carboxylase, Atpase Subunit From Burkholderia
Thailandensis
Length = 419
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 13/140 (9%)
Query: 232 PAMIK-ASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMKVASQSRHLEVQLLCD 290
P ++K A G GKG +V E R + G + G P + K EV L
Sbjct: 173 PGILKTARLGYDGKGQVRVATAQEARDAY----GSLGGVPCVLEK--RLPLKYEVSALIA 226
Query: 291 QYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLET---VKKLEQAARRLAKCVNYVGAAT 347
+ N A+ + Q H I + AP + V+ +QAA R+A ++YVG
Sbjct: 227 RGANGAS--AVFPLAQNTHHGGILSLSVVPAPAASDALVRDAQQAAARIADSLDYVGVLC 284
Query: 348 VEYLYSMETGEYYFLELNPR 367
VE+ + +E G E+ PR
Sbjct: 285 VEF-FVLEDGSLVANEMAPR 303
>pdb|2CZG|A Chain A, Crystal Structure Of Probable Phosphoribosylglycinamide
Formyl Transferase (Ph0318) From Pyrococcus Horikoshii
Ot3
pdb|2CZG|B Chain B, Crystal Structure Of Probable Phosphoribosylglycinamide
Formyl Transferase (Ph0318) From Pyrococcus Horikoshii
Ot3
pdb|2DWC|A Chain A, Crystal Structure Of Probable Phosphoribosylglycinamide
Formyl Transferase From Pyrococcus Horikoshii Ot3
Complexed With Adp
pdb|2DWC|B Chain B, Crystal Structure Of Probable Phosphoribosylglycinamide
Formyl Transferase From Pyrococcus Horikoshii Ot3
Complexed With Adp
Length = 433
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 10/142 (7%)
Query: 206 IPDDVYRQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGE 265
+P Y A T +E +C+ +GYP KA GKG V +++ +++ + +
Sbjct: 134 VPTSRYMYAT--TLDELYEACEKIGYPCHTKAIMSSSGKGSYFVKGPEDIPKAWEEAKTK 191
Query: 266 VPGSPIFIMKVASQSRHLEVQLLC----DQYGNVAALHSRDCSVQRRHQKIIEEGPITVA 321
GS I+ +EV L D+ G + + H +I + +
Sbjct: 192 ARGSAEKIIVEEHIDFDVEVTELAVRHFDENGEIVTTFPKPVG----HYQIDGDYHASWQ 247
Query: 322 PLETVKKLEQAARRLAKCVNYV 343
P E +K E+ R+AK + V
Sbjct: 248 PAEISEKAEREVYRIAKRITDV 269
>pdb|3LWB|A Chain A, Crystal Structure Of Apo D-Alanine:d-Alanine Ligase (Ddl)
From Mycobacterium Tuberculosis
pdb|3LWB|B Chain B, Crystal Structure Of Apo D-Alanine:d-Alanine Ligase (Ddl)
From Mycobacterium Tuberculosis
Length = 373
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 17/142 (11%)
Query: 226 CQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMKVASQSRHLEV 285
C+ +G P +K + GG G+ +V + D++ A + + P I++ A R LE
Sbjct: 184 CERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRH---DPKVIVEAAISGRELEC 240
Query: 286 QLLCDQYGN----------VAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARR 335
+L G VA + R+ S K +++ P + ++ +A R+
Sbjct: 241 GVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQ 300
Query: 336 LA----KCVNYVGAATVEYLYS 353
LA ++ G A V++ +
Sbjct: 301 LAIRAFAAIDCRGLARVDFFLT 322
>pdb|3BFJ|A Chain A, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|B Chain B, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|C Chain C, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|D Chain D, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|E Chain E, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|F Chain F, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|G Chain G, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|H Chain H, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|I Chain I, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|J Chain J, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|K Chain K, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|L Chain L, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|M Chain M, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|N Chain N, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|O Chain O, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|P Chain P, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|Q Chain Q, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|R Chain R, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|S Chain S, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
pdb|3BFJ|T Chain T, Crystal Structure Analysis Of 1,3-Propanediol
Oxidoreductase
Length = 387
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 29 PAAMSEVDEFCRSLGGKKPIHSILIANNGMAAVKFIRSIRTWAY-ETFGTEKAILLVAMA 87
P A+S V E C+ LGGKK ++L+ + G+ A+K +T Y G E AI
Sbjct: 18 PNAISVVGERCQLLGGKK---ALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEP 74
Query: 88 TPEDMRI 94
P+D +
Sbjct: 75 NPKDTNV 81
>pdb|2ESS|A Chain A, Crystal Structure Of An Acyl-Acp Thioesterase
(Np_810988.1) From Bacteroides Thetaiotaomicron Vpi-5482
At 1.90 A Resolution
Length = 248
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 848 ESKCKEFERISSSQNVDFPAKLLRGVLEAHLLSCA 882
E+K ++ ++ +VDF +L GVL HLL+CA
Sbjct: 5 ENKIGTYQFVAEPFHVDFNGRLTXGVLGNHLLNCA 39
>pdb|1PIX|A Chain A, Crystal Structure Of The Carboxyltransferase Subunit Of The
Bacterial Ion Pump Glutaconyl-Coenzyme A Decarboxylase
pdb|1PIX|B Chain B, Crystal Structure Of The Carboxyltransferase Subunit Of The
Bacterial Ion Pump Glutaconyl-Coenzyme A Decarboxylase
Length = 587
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 152/419 (36%), Gaps = 89/419 (21%)
Query: 1603 SGRTILIVANDVTFKAGSFGPREDAFFLAVTDLACAKKLPLIYLAANSGARIGVAEEVKA 1662
+G+ ++VA+D AG++ P + L +D A +PL+Y+ SG + E+V
Sbjct: 103 NGKWCVVVASDNKKLAGAWVPGQAECLLRASDTAKTLHVPLVYVLNCSGVKFDEQEKVY- 161
Query: 1663 CFEIGWTDELNPD-RGFNYVYLTPEDYARIGSSVIA--HEMKLESGETRWVVDSIVGKED 1719
P+ RG + + ++G VI + G + +++ +
Sbjct: 162 -----------PNRRGGGTPFFRNAELNQLGIPVIVGIYGTNPAGGGYHSISPTVIIAHE 210
Query: 1720 GLGVENLTGSGAIAGAYSRAY------KETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQ 1773
+ + G+G + G + + E + TG+T GA +D
Sbjct: 211 KANMA-VGGAGIMGGMNPKGHVDLEYANEIADMVDRTGKTEPPGA------------VDI 257
Query: 1774 PIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGISAILKWLSYVPP 1833
TGF REVY+S GV LEGI + L P
Sbjct: 258 HYTETGFM-------REVYASE-----------EGV--------LEGIKKYVGMLPKYDP 291
Query: 1834 HIGGALPIISPLDPPDRPVEYLPENSCDPRAAICGFLDNNGKWIGGIFDKDSFVETLEGW 1893
+P P D +P N D RA + I +FD E +G+
Sbjct: 292 EFFRVDDPKAPAFPADDLYSMVPLN--DKRAY------DIYNVIARLFDNSELHEYKKGY 343
Query: 1894 ARTVVTGRARLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTA 1953
+VTG A++ G+ VG+VA Q ++ P AG V +
Sbjct: 344 GPEMVTGLAKVNGLLVGVVA-NVQGLLMNYPE-----------YKAAGSVGIGGKLYR-- 389
Query: 1954 QALMDFN-------REELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPVF 2005
Q L+ N R+ LP+ + + G G +L G +++ +++T P F
Sbjct: 390 QGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAELLGLGQSLIYSIQTSHIPQF 448
>pdb|2D5D|A Chain A, Structure Of Biotin Carboxyl Carrier Protein (74val Start)
From Pyrococcus Horikoshi Ot3 Ligand Free Form Ii
pdb|2D5D|B Chain B, Structure Of Biotin Carboxyl Carrier Protein (74val Start)
From Pyrococcus Horikoshi Ot3 Ligand Free Form Ii
pdb|2EVB|A Chain A, Structure Of Biotin Carboxyl Carrier Protein (74val Start)
From Pyrococcus Horikoshi Ot3 Ligand Free Form I
pdb|2EJF|C Chain C, Crystal Structure Of The Biotin Protein Ligase (Mutations
R48a And K111a) And Biotin Carboxyl Carrier Protein
Complex From Pyrococcus Horikoshii Ot3
pdb|2EJF|D Chain D, Crystal Structure Of The Biotin Protein Ligase (Mutations
R48a And K111a) And Biotin Carboxyl Carrier Protein
Complex From Pyrococcus Horikoshii Ot3
pdb|2EJG|C Chain C, Crystal Structure Of The Biotin Protein Ligase (Mutation
R48a) And Biotin Carboxyl Carrier Protein Complex From
Pyrococcus Horikoshii Ot3
pdb|2EJG|D Chain D, Crystal Structure Of The Biotin Protein Ligase (Mutation
R48a) And Biotin Carboxyl Carrier Protein Complex From
Pyrococcus Horikoshii Ot3
Length = 74
Score = 31.2 bits (69), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 692 AETPCKLLRYLVSDGSHIDADTPYAEVEVMKMCMPLLSPASGVLQ-FKMAEGQAMQAGEL 750
A P K+LR LV G + +E MKM + SP GV++ + EG+A+ G+
Sbjct: 10 APMPGKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEGEAVDTGQP 69
Query: 751 IARL 754
+ L
Sbjct: 70 LIEL 73
>pdb|3ORQ|A Chain A, Crystal Structure Of N5-Carboxyaminoimidazole Synthetase
From Staphylococcus Aureus Complexed With Adp
pdb|3ORQ|B Chain B, Crystal Structure Of N5-Carboxyaminoimidazole Synthetase
From Staphylococcus Aureus Complexed With Adp
pdb|3ORR|A Chain A, Crystal Structure Of N5-Carboxyaminoimidazole Synthetase
From Staphylococcus Aureus
pdb|3ORR|B Chain B, Crystal Structure Of N5-Carboxyaminoimidazole Synthetase
From Staphylococcus Aureus
Length = 377
Score = 31.2 bits (69), Expect = 7.0, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 227 QVVGYPAMIKASWGG-GGKGIRKVHNDDEVRALFKQVQGE--VPGSPIFIMKVASQSRHL 283
+ +GYP ++K +GG GKG ++N+ +++ FK ++ V + I K
Sbjct: 142 ETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGFKLIETSECVAEKYLNIKK-------- 193
Query: 284 EVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCVNYV 343
EV L + N + R+Q + + I A ++ + ++ ++ + ++++
Sbjct: 194 EVSLTVTRGNNNQITFFPLQENEHRNQILFKT--IVPARIDKTAEAKEQVNKIIQSIHFI 251
Query: 344 GAATVEYLYSMETGEYYFLELNPR 367
G TVE+ + Y E+ PR
Sbjct: 252 GTFTVEFFID-SNNQLYVNEIAPR 274
>pdb|1IOW|A Chain A, Complex Of Y216f D-Ala:d-Ala Ligase With Adp And A
Phosphoryl Phosphinate
Length = 306
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 140 GHASEIPELPDTLSTKGIIFLGPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPP 199
G E L L G+ + G + A DK+ S L+ Q A +P PW
Sbjct: 64 GRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPW--------- 114
Query: 200 ESCLVTIPDDVYRQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVR 256
V + + + +++ +A +G P ++K S G G+ KV ++ ++
Sbjct: 115 ----VALTRAEFEKGL---SDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQ 164
>pdb|1IOV|A Chain A, Complex Of D-Ala:d-Ala Ligase With Adp And A Phosphoryl
Phosphonate
pdb|2DLN|A Chain A, Vancomycin Resistance: Structure Of D-Alanine:d-Alanine
Ligase At 2.3 Angstroms Resolution
Length = 306
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 140 GHASEIPELPDTLSTKGIIFLGPPATSMAALGDKIGSSLIAQAANVPTLPWSGSHVKIPP 199
G E L L G+ + G + A DK+ S L+ Q A +P PW
Sbjct: 64 GRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPW--------- 114
Query: 200 ESCLVTIPDDVYRQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVR 256
V + + + +++ +A +G P ++K S G G+ KV ++ ++
Sbjct: 115 ----VALTRAEFEKGL---SDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQ 164
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,237,529
Number of Sequences: 62578
Number of extensions: 2788920
Number of successful extensions: 7036
Number of sequences better than 100.0: 86
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 6686
Number of HSP's gapped (non-prelim): 145
length of query: 2267
length of database: 14,973,337
effective HSP length: 114
effective length of query: 2153
effective length of database: 7,839,445
effective search space: 16878325085
effective search space used: 16878325085
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)