BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000096
(2260 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 196/294 (66%), Gaps = 18/294 (6%)
Query: 18 SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGKLEMLDRLL 69
++ N++M+LR ICNHPY+ Q H EE +H Y ++ R GK E+LDR+L
Sbjct: 1009 TLMNTIMQLRKICNHPYMFQ-HIEES---FAEHLGYSNGVINGAELYRASGKFELLDRIL 1064
Query: 70 PKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPF 129
PKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+ S +
Sbjct: 1065 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1124
Query: 130 FIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQT 189
FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV +
Sbjct: 1125 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1184
Query: 190 VEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-RECKKEEAAPVLDDDAL 248
VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE V DD+ L
Sbjct: 1185 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETL 1244
Query: 249 NDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDD 302
N ++AR E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1245 NQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD 1293
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 271 bits (694), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 196/294 (66%), Gaps = 18/294 (6%)
Query: 18 SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGKLEMLDRLL 69
++ N++M+LR ICNHPY+ Q H EE +H Y ++ R GK E+LDR+L
Sbjct: 1004 TLMNTIMQLRKICNHPYMFQ-HIEES---FAEHLGYSNGVINGAELYRASGKFELLDRIL 1059
Query: 70 PKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPF 129
PKL+AT+HRVL F MT L+ +MEDY F+ + YLRLDG T DR AL+ KFN+ S +
Sbjct: 1060 PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY 1119
Query: 130 FIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQT 189
FIFLLS RAGG+G+NLQAADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV +
Sbjct: 1120 FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS 1179
Query: 190 VEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-RECKKEEAAPVLDDDAL 248
VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE V DD+ L
Sbjct: 1180 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETL 1239
Query: 249 NDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDD 302
N ++AR E E D+F +D RR E+ ++ R + D LPS ++ DD
Sbjct: 1240 NQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED-----ELPSWIIKDD 1288
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/326 (43%), Positives = 196/326 (60%), Gaps = 55/326 (16%)
Query: 21 NSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGKLEMLDRLLPKL 72
N++M+LR ICNHPY+ Q H EE +H + IV R GK E+LDR+LPKL
Sbjct: 1037 NTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGKFELLDRILPKL 1092
Query: 73 KATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIF 132
+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+ FN+ S +FIF
Sbjct: 1093 RATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIF 1152
Query: 133 LLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEE 192
LLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV +VEE
Sbjct: 1153 LLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE 1212
Query: 193 QVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL--------REC---------- 234
++ A+A++KL V + I AG FD +S+ +RR +L+++L R C
Sbjct: 1213 KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFA 1272
Query: 235 ------------------KKEEAAPVLDDDALNDLLARSESEIDVFESVDKQRREEEMAT 276
K+E+ P DD+ +N ++AR E E D+F +D RR EE
Sbjct: 1273 HTAPPPAGVNPDLEEPPLKEEDEVP--DDETVNQMIARHEEEFDLFMRMDLDRRREEARN 1330
Query: 277 WRKLIRGLGTDGEPLPPLPSRLVTDD 302
++ R + D LPS ++ DD
Sbjct: 1331 PKRKPRLMEED-----ELPSWIIKDD 1351
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/293 (48%), Positives = 195/293 (66%), Gaps = 18/293 (6%)
Query: 19 VHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGKLEMLDRLLP 70
+ N++M+LR ICNHPY+ Q H EE +H + IV R GK E+LDR+LP
Sbjct: 1027 LMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGKFELLDRILP 1082
Query: 71 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 130
KL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+ FN+ S +F
Sbjct: 1083 KLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYF 1142
Query: 131 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 190
IFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV +V
Sbjct: 1143 IFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1202
Query: 191 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-RECKKEEAAPVLDDDALN 249
EE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE V DD+ +N
Sbjct: 1203 EEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVN 1262
Query: 250 DLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDD 302
++AR E E D+F +D RR EE ++ R + D LPS ++ DD
Sbjct: 1263 QMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIKDD 1310
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/295 (47%), Positives = 192/295 (65%), Gaps = 26/295 (8%)
Query: 21 NSVMELRNICNHPYLSQLHAEE------------VDTLIPKHYLPPIVRLCGKLEMLDRL 68
N++M+LR ICNHPY+ Q H EE V L + R GK E+LDR+
Sbjct: 1037 NTIMQLRKICNHPYMFQ-HIEESFSEHLGFTGGIVQGL-------DLYRASGKFELLDRI 1088
Query: 69 LPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSP 128
LPKL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+ FN+ S
Sbjct: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE 1148
Query: 129 FFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQ 188
+FIFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV
Sbjct: 1149 YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN 1208
Query: 189 TVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-RECKKEEAAPVLDDDA 247
+VEE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE V DD+
Sbjct: 1209 SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDET 1268
Query: 248 LNDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDD 302
+N ++AR E E D+F +D RR EE ++ R + D LPS ++ DD
Sbjct: 1269 VNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIKDD 1318
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/293 (48%), Positives = 195/293 (66%), Gaps = 18/293 (6%)
Query: 19 VHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGKLEMLDRLLP 70
+ N++M+LR ICNHPY+ Q H EE +H + IV R GK E+LDR+LP
Sbjct: 1035 LMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGKFELLDRILP 1090
Query: 71 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 130
KL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+ FN+ S +F
Sbjct: 1091 KLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYF 1150
Query: 131 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 190
IFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV +V
Sbjct: 1151 IFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1210
Query: 191 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-RECKKEEAAPVLDDDALN 249
EE++ A+A++KL V + I AG FD +S+ +RR +L+++L E + EE V DD+ +N
Sbjct: 1211 EEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVN 1270
Query: 250 DLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDD 302
++AR E E D+F +D RR EE ++ R + D LPS ++ DD
Sbjct: 1271 QMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEED-----ELPSWIIKDD 1318
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/258 (48%), Positives = 186/258 (72%), Gaps = 5/258 (1%)
Query: 21 NSVMELRNICNHPYLSQLHAEEVDTLIPKHYL---PPIVRLCGKLEMLDRLLPKLKATDH 77
N++++LR +CNHP++ Q E+ H + P + R+ GK E+LDR+LPKLKAT+H
Sbjct: 1056 NTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKATNH 1115
Query: 78 RVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIR 137
RVL F MT+ + ++EDYL ++Q+ YLRLDG T DRG L+ KFN + S F+FLLS R
Sbjct: 1116 RVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTR 1175
Query: 138 AGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRAS 197
AGG+G+NLQ ADTV+IFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV +VEE++ A+
Sbjct: 1176 AGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 1235
Query: 198 AEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRE--CKKEEAAPVLDDDALNDLLARS 255
A +KL + + I AG FD ++ +R+++L+++L + ++EE V DD+ +N ++ARS
Sbjct: 1236 ARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIARS 1295
Query: 256 ESEIDVFESVDKQRREEE 273
E EI++F+ +D +R++E+
Sbjct: 1296 EEEIEIFKRMDAERKKED 1313
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/374 (40%), Positives = 214/374 (57%), Gaps = 54/374 (14%)
Query: 17 RSVHNSVMELRNICNHPYLSQLHAEEVDTLI--PKHYLPPIVRLCGKLEMLDRLLPKLKA 74
R +N +M+L+ ICNHP++ EEV+ I + I R+ GK E+LDR+LPKLKA
Sbjct: 1046 RGFNNQIMQLKKICNHPFV----FEEVEDQINPTRETNDDIWRVAGKFELLDRILPKLKA 1101
Query: 75 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 134
T HRVL F MT+++D+MED+L + +YLRLDGHT +R L+ FN DS + F+L
Sbjct: 1102 TGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFIL 1161
Query: 135 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 194
S RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQK +V +LR T +VEE +
Sbjct: 1162 STRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVI 1221
Query: 195 RASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL-----RECKKEEAA---PVLDDD 246
A KL + + I AG FDN +++E++ L SLL R K+E L D
Sbjct: 1222 LERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESGVEEEEELKDS 1281
Query: 247 ALNDLLARSESEIDVFESVDKQR--REEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDDL 304
+N++LAR++ E+ V +D+ R +EEE+ + SRL+ +L
Sbjct: 1282 EINEILARNDEEMAVLTRMDEDRSKKEEELG------------------VKSRLLEKSEL 1323
Query: 305 KALYEAMKIYDAPKTGVSPNVG--VKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEE 362
+Y S ++G +KR+ A+ + GRG R R+ +Y + +EE+
Sbjct: 1324 PDIY-------------SRDIGAELKREESESAAV---YNGRGARERKTATYNDNMSEEQ 1367
Query: 363 FEKMCQAESSDSPK 376
+ + Q E SD K
Sbjct: 1368 W--LRQFEVSDDEK 1379
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 248 bits (632), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 213/361 (59%), Gaps = 38/361 (10%)
Query: 9 GSIGNSKG--RSVHNSVMELRNICNHPYLSQLHAEEVDTLI--PKHYLPPIVRLCGKLEM 64
G+ G +KG + ++N +M+LR ICNHP++ +EV+ ++ + + R+ GK E+
Sbjct: 740 GTEGATKGGIKGLNNKIMQLRKICNHPFV----FDEVEGVVNPSRGNSDLLFRVAGKFEL 795
Query: 65 LDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQ 124
LDR+LPK KA+ HRVL F MT+++D+MED+L K +Y+RLDG T +R +++ FN
Sbjct: 796 LDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNA 855
Query: 125 QDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRF 184
DS +F FLLS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQK +V +LR
Sbjct: 856 PDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL 915
Query: 185 ETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRE--CKKEEAAPV 242
T +VEE + A KL + + I AG FDN ++AE++ +L L+ + ++
Sbjct: 916 ITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDDKAE 975
Query: 243 LDDDALNDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDD 302
LDDD LND LARS E +F+ +DK+R +E A G +P P RL+ D
Sbjct: 976 LDDDELNDTLARSADEKILFDKIDKERMNQERA-------DAKAQGLRVP--PPRLIQLD 1026
Query: 303 DLKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEEQWTEEE 362
+L P V + EH D++ GR ++ + V Y++ TEE+
Sbjct: 1027 EL------------------PKVFREDIEEHFKKEDSEPLGRIRQKKRV-YYDDGLTEEQ 1067
Query: 363 F 363
F
Sbjct: 1068 F 1068
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 247 bits (630), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 208/353 (58%), Gaps = 37/353 (10%)
Query: 9 GSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLI--PKHYLPPIVRLCGKLEMLD 66
G G + + + N+VM+L+ ICNHP++ E+V+ I + + R GK E+LD
Sbjct: 1138 GEKGKTGIKGLQNTVMQLKKICNHPFI----FEDVERAIDPSGTNVDLLWRAAGKFELLD 1193
Query: 67 RLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQD 126
R+LPKL T H+ L F MT+++ +MEDYL K ++YLRLDG T DR +L+ +FN
Sbjct: 1194 RILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPK 1253
Query: 127 SPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFET 186
S +IF+LS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQ ++V +LR T
Sbjct: 1254 SDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLIT 1313
Query: 187 VQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAPV---L 243
+++EE + + A++KL + + I AG FDN ++ E+R +L SLL ++ L
Sbjct: 1314 EKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGEL 1373
Query: 244 DDDALNDLLARSESEIDVFESVDKQRREEEMATWRKLIRGLGTDGEPLPPLPSRLVTDDD 303
DD LN+L++R++ E+ +F+ +DK+R + I G G+PL RL+T ++
Sbjct: 1374 QDDELNELISRTDEELVLFKKLDKERAATD-------IYG---KGKPL----ERLLTVNE 1419
Query: 304 LKALYEAMKIYDAPKTGVSPNVGVKRKGEHLGALDTQHYGRGKRAREVRSYEE 356
L Y K V + V+ E L+ Q+ R +R R SY E
Sbjct: 1420 LPDFY---------KVEVD-SFAVQSSSE----LEDQYLERKRRRRNSISYTE 1458
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/258 (46%), Positives = 171/258 (66%), Gaps = 7/258 (2%)
Query: 12 GNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHY-LPPIVRLCGKLEMLDRLLP 70
G + + + N+VM+L+ ICNHP++ + +D P + + R+ GK E+LDR+LP
Sbjct: 690 GKTGIKGLQNTVMQLKKICNHPFVFEDVERSID---PTGFNYDMLWRVSGKFELLDRILP 746
Query: 71 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 130
KL + HR+L F MT+++++MEDYL ++Q+RYLRLDG T DR L+ FN +
Sbjct: 747 KLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVN 806
Query: 131 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 190
+FLLS RAGG+G+NLQ ADTVIIFD+DWNP DLQAQ RAHRIGQ ++V + R T ++V
Sbjct: 807 LFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSV 866
Query: 191 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAPV---LDDDA 247
EE + A A++KL + + I AG FDN ++ E+R +L SLL EE LDDD
Sbjct: 867 EENILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDDDE 926
Query: 248 LNDLLARSESEIDVFESV 265
LN++LAR + E+ +F+ +
Sbjct: 927 LNEILARGDDELRLFKQM 944
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/251 (45%), Positives = 158/251 (62%), Gaps = 16/251 (6%)
Query: 7 NLGSIGNSKGRSVHNSVMELRNICNHPYL---------SQLHAEEVDTLIPKHYLPPIVR 57
++G+ NS ++ N++MELR CNHPYL S+L E D L P +L +VR
Sbjct: 1109 SMGATQNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELR-EVYDPLAPDFHLQALVR 1167
Query: 58 LCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGA 117
GKL +LD+LLP+LKA H+VL FS M R LD++EDYL K+Y Y R+DG G R A
Sbjct: 1168 SAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQA 1227
Query: 118 LIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKR 177
ID+F++ DS F+FLL RAGG+G+NL AADT +IFD+DWNPQ DLQAQAR HRIGQ +
Sbjct: 1228 AIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSK 1287
Query: 178 DVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSA--EDRREYLESLLRECK 235
V V R T + E ++ A KLG+ ++++ N S+ + ++ +E LLR
Sbjct: 1288 AVKVYRLITRNSYEREMLDKASLKLGL-DRAVLQSMSGNKESSIQQFSKKEIEDLLR--- 1343
Query: 236 KEEAAPVLDDD 246
K A ++D++
Sbjct: 1344 KGAYAAIMDEN 1354
>sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1
Length = 2193
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 170/287 (59%), Gaps = 42/287 (14%)
Query: 17 RSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATD 76
R+++N MELR CNHP L+ + + K +L VR CGKL +LDR+L KL+ T
Sbjct: 1272 RTLNNRCMELRKACNHPLLNYPYFND----FSKDFL---VRSCGKLWILDRILIKLQRTG 1324
Query: 77 HRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSI 136
HRVL FSTMT+LLD++E+YL +++ Y R+DG TS DR + I FN D+ FIFLLSI
Sbjct: 1325 HRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSI 1384
Query: 137 RAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETV------QTV 190
RA G G+NLQ ADTV+I+D D NP+ + QA ARAHRIGQ R+V V+ E V
Sbjct: 1385 RAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVEKLSSHQK 1444
Query: 191 EEQVRASA---------------------------EHKLGVANQSITAGFFDNNTSAEDR 223
E+++R+ ++K+ +A++ I AG FD T+ E+R
Sbjct: 1445 EDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEER 1504
Query: 224 REYLESLLR--ECKKEEAAPVLDDDALNDLLARSESEIDVFESVDKQ 268
R LE+LL E +E V +N ++ARSE E+++F+ +D++
Sbjct: 1505 RMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEE 1551
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 135/213 (63%), Gaps = 12/213 (5%)
Query: 4 VEENLGSIGNSKGRS----VHNSVMELRNICNHPYLSQ-------LHAEEVDTLIPKHY- 51
+E+N + G + + N++MELR CNHPYL + E +IP+ +
Sbjct: 1067 LEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFH 1126
Query: 52 LPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTS 111
L +VR GKL ++D+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG
Sbjct: 1127 LQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVR 1186
Query: 112 GGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAH 171
G R A ID+F++ DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR H
Sbjct: 1187 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1246
Query: 172 RIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 204
RIGQ + V V R T + E ++ A KLG+
Sbjct: 1247 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGL 1279
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 135/213 (63%), Gaps = 12/213 (5%)
Query: 4 VEENLGSIGNSKGRS----VHNSVMELRNICNHPYLSQ-------LHAEEVDTLIPKHY- 51
+E+N + G + + N++MELR CNHPYL + E +IP+ +
Sbjct: 1065 LEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFH 1124
Query: 52 LPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTS 111
L +VR GKL ++D+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG
Sbjct: 1125 LQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVR 1184
Query: 112 GGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAH 171
G R A ID+F++ DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244
Query: 172 RIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 204
RIGQ + V V R T + E ++ A KLG+
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGL 1277
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 204 bits (519), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 136/213 (63%), Gaps = 12/213 (5%)
Query: 4 VEENLGSIGNSKGRS----VHNSVMELRNICNHPYLSQLHAEEVDT-------LIPKHY- 51
+E+N + G + + N++MELR CNHPYL E++ T +IP +
Sbjct: 1065 LEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFH 1124
Query: 52 LPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTS 111
L +VR GKL ++D+LLPKLKA H+VL FS M R LD++EDYL ++Y Y R+DG
Sbjct: 1125 LQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVR 1184
Query: 112 GGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAH 171
G R A ID+F++ DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244
Query: 172 RIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 204
RIGQ + V V R T + E ++ A KLG+
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGL 1277
>sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9
PE=1 SV=2
Length = 2897
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 136/213 (63%), Gaps = 12/213 (5%)
Query: 4 VEENLGSIGNSKGRS----VHNSVMELRNICNHPYL-----SQLHAEEVDTLIPK---HY 51
+E+N + G++ + N++MELR CNHPYL ++ E DT P +
Sbjct: 1114 LEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFH 1173
Query: 52 LPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTS 111
L +++ GKL ++D+LLPK+KA H+VL FS M R LD++EDYL K+Y Y R+DG
Sbjct: 1174 LQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVR 1233
Query: 112 GGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAH 171
G R A ID+F++ DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293
Query: 172 RIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 204
RIGQ + V V R T + E ++ A KLG+
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGL 1326
>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
PE=1 SV=2
Length = 2885
Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 136/213 (63%), Gaps = 12/213 (5%)
Query: 4 VEENLGSIGNSKGRS----VHNSVMELRNICNHPYL-----SQLHAEEVDTLIPK---HY 51
+E+N + G++ + N++MELR CNHPYL ++ E DT P +
Sbjct: 1113 LEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFH 1172
Query: 52 LPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTS 111
L +++ GKL ++D+LLPK+KA H+VL FS M R LD++EDYL K+Y Y R+DG
Sbjct: 1173 LQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVR 1232
Query: 112 GGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAH 171
G R A ID+F++ DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR H
Sbjct: 1233 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1292
Query: 172 RIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 204
RIGQ + V V R T + E ++ A KLG+
Sbjct: 1293 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGL 1325
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 161/276 (58%), Gaps = 22/276 (7%)
Query: 4 VEENLGSIGNSKGRS----VHNSVMELRNICNHPYLSQLHAEEV--------DTLIPKHY 51
+E+N + G++ + N++MELR CNHPYL E++ + P
Sbjct: 1223 LEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQ 1282
Query: 52 LPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTS 111
L +++ GKL ++D+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG
Sbjct: 1283 LQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVR 1342
Query: 112 GGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAH 171
G R A ID+F++ DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR H
Sbjct: 1343 GNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1402
Query: 172 RIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLE 228
RIGQ + V + R T + E ++ A KLG+ QS++ N + ++ +E
Sbjct: 1403 RIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIE 1462
Query: 229 SLLREC-------KKEEAAPVLDDDALNDLLARSES 257
LLR+ +++E + ++D LL R+ +
Sbjct: 1463 DLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHT 1498
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 201 bits (511), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 161/276 (58%), Gaps = 22/276 (7%)
Query: 4 VEENLGSIGNSKGRS----VHNSVMELRNICNHPYLSQLHAEEV--------DTLIPKHY 51
+E+N + G++ + N++MELR CNHPYL E++ + P
Sbjct: 1212 LEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQ 1271
Query: 52 LPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTS 111
L +++ GKL ++D+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG
Sbjct: 1272 LQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVR 1331
Query: 112 GGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAH 171
G R A ID+F++ DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR H
Sbjct: 1332 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1391
Query: 172 RIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLE 228
RIGQ + V + R T + E ++ A KLG+ QS++ N + ++ +E
Sbjct: 1392 RIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIE 1451
Query: 229 SLLREC-------KKEEAAPVLDDDALNDLLARSES 257
LLR+ +++E + ++D LL R+ +
Sbjct: 1452 DLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHT 1487
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 200 bits (509), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 161/276 (58%), Gaps = 22/276 (7%)
Query: 4 VEENLGSIGNSKGRS----VHNSVMELRNICNHPYLSQLHAEEV--------DTLIPKHY 51
+E+N + G++ + N++MELR CNHPYL E++ + P
Sbjct: 1222 LEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQ 1281
Query: 52 LPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTS 111
L +++ GKL ++D+LLPKLKA HRVL FS M R LD++EDYL ++Y Y R+DG
Sbjct: 1282 LQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVR 1341
Query: 112 GGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAH 171
G R A ID+F++ DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR H
Sbjct: 1342 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1401
Query: 172 RIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLE 228
RIGQ + V + R T + E ++ A KLG+ QS++ N + ++ +E
Sbjct: 1402 RIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIE 1461
Query: 229 SLLREC-------KKEEAAPVLDDDALNDLLARSES 257
LLR+ +++E + ++D LL R+ +
Sbjct: 1462 DLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHT 1497
>sp|B5DE69|CHD8_XENTR Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis
GN=chd8 PE=2 SV=2
Length = 2184
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/240 (45%), Positives = 149/240 (62%), Gaps = 19/240 (7%)
Query: 21 NSVMELRNICNHPYLSQLHAEEVDTLI--------PKHYLPPIVRLCGKLEMLDRLLPKL 72
N++MELR CNHPYL E++ + P ++ +VR GKL ++D+LLPKL
Sbjct: 1030 NTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDFHVQAMVRSSGKLVLIDKLLPKL 1089
Query: 73 KATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIF 132
+A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ DS F+F
Sbjct: 1090 RAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRFVF 1149
Query: 133 LLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEE 192
LL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T + E
Sbjct: 1150 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYER 1209
Query: 193 QVRASAEHKLGVAN---QSITAGFFDNNTSA---EDRREYLESLLRECKKEEAAPVLDDD 246
++ A KLG+ QS++ DN+ S + ++ +E LLR K A ++D+D
Sbjct: 1210 EMFDKASLKLGLDKAVLQSMSGR--DNHLSGPIQQFTKKEIEDLLR---KGAYAAIMDED 1264
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 163/265 (61%), Gaps = 11/265 (4%)
Query: 8 LGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPK--HYLPPIVRLCGKLEML 65
L G + S+ N +M+LR CNHPYL AEE T+ P + + + + GKL++L
Sbjct: 533 LNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEA-TISPSGLYEMSSLTKASGKLDLL 591
Query: 66 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 125
++L +LKA +HRVL FS MT++L+V+E +L + Y+Y R+DG G R ID+FN
Sbjct: 592 SKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDP 651
Query: 126 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 185
S F+FLLS RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHR+GQK+ V++ RF
Sbjct: 652 VSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFV 711
Query: 186 TVQTVEEQVRASAEHKLGVANQSITAGF--FDNNTSAEDRREYL----ESLLRECKKEEA 239
T +VEE++ A+HK+ + + + G N S ++ + L E L ++ K E
Sbjct: 712 THNSVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRFGTEDLFKDGKSE-- 769
Query: 240 APVLDDDALNDLLARSESEIDVFES 264
A DD A+ DLL R+ I+ ES
Sbjct: 770 AIHYDDKAVADLLDRTNRGIEEKES 794
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 132/215 (61%), Gaps = 16/215 (7%)
Query: 4 VEENLGSIGNSKGRSVHN------SVMELRNICNHPYLSQLHAEEVDTLI--------PK 49
+E+N + +KG + HN ++MELR CNHPYL E++ P
Sbjct: 715 LEKNFSFL--TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPD 772
Query: 50 HYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGH 109
L +++ GKL ++D+LLPKL A H+VL FS M R LD++EDYL ++Y Y R+DG
Sbjct: 773 FQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGR 832
Query: 110 TSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQAR 169
G R A ID+F + DS F+FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR
Sbjct: 833 VRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 892
Query: 170 AHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 204
HRIGQ + V V R T + E ++ A KLG+
Sbjct: 893 CHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGL 927
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 155/254 (61%), Gaps = 8/254 (3%)
Query: 18 SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHY-LPPIVRLCGKLEMLDRLLPKLKATD 76
S+ N +M+L+ CNHPYL AEE T Y + + + GKL +L ++L +LKA +
Sbjct: 1009 SLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQN 1068
Query: 77 HRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSI 136
HRVL FS MT++LD++ED+L +QY+Y R+DG +G R ID+FN + F+FLLS
Sbjct: 1069 HRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLST 1128
Query: 137 RAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRA 196
RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ V++ RF T +VEE+V
Sbjct: 1129 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQ 1188
Query: 197 SAEHKLGVANQSITAGF------FDNNTSAEDRREYLESLLRECKKEEAAPVLDDDALND 250
A+ K+ + + + G F + R E L +E KEEA DD A+ +
Sbjct: 1189 VAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKEDDKEEAIHY-DDKAVAE 1247
Query: 251 LLARSESEIDVFES 264
LL R+ I+ ES
Sbjct: 1248 LLDRTNRGIEEKES 1261
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 171/293 (58%), Gaps = 20/293 (6%)
Query: 1 MKRVEENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLC 59
+ R E L S G S+ N +M+L+ CNHPYL + A E L Y +++
Sbjct: 1000 LTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSS 1059
Query: 60 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 119
GKL +L ++L KLK HRVL FS MT++LD++ED+L ++ Y+Y R+DG +G R I
Sbjct: 1060 GKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAI 1119
Query: 120 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 179
D+FN + F FLLS RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHRIGQ V
Sbjct: 1120 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKV 1179
Query: 180 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR------- 232
++ RF T +VEE++ A+ K+ + + + G + + ++ L+ +L+
Sbjct: 1180 MIYRFVTRASVEERITQVAKRKMMLTHLVVRPGL--GSKAGSMSKQELDDILKFGTEELF 1237
Query: 233 ------ECKKEEAAPV-LDDDALNDLLARSESEIDVFESVDKQRREEEMATWR 278
E K+E+++ + D++A+ LL R++ D E D Q E +++++
Sbjct: 1238 KDENEGENKEEDSSVIHYDNEAIARLLDRNQ---DATEDTDVQNMNEYLSSFK 1287
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 130/207 (62%), Gaps = 6/207 (2%)
Query: 12 GNSKGR---SVHNSVMELRNICNHPYLSQLHAEEV---DTLIPKHYLPPIVRLCGKLEML 65
G++ GR S+ N V+EL+ + NHPYL AE+ + + L I+ GK+ +L
Sbjct: 650 GHTDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLL 709
Query: 66 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 125
D+LL +LK HRVL FS M R+L+++ +Y++ + Y Y RLDG R ID FN
Sbjct: 710 DKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAP 769
Query: 126 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 185
DSP F+FLLS RAGG+G+NL ADTVIIFD+DWNPQ DLQA ARAHRIGQK V V RF
Sbjct: 770 DSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFL 829
Query: 186 TVQTVEEQVRASAEHKLGVANQSITAG 212
+ TVEE + A K+ + I+ G
Sbjct: 830 SKDTVEEDILERARRKMILEYAIISLG 856
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 136/214 (63%), Gaps = 1/214 (0%)
Query: 1 MKRVEENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHY-LPPIVRLC 59
+ R E L S G S+ N +M+L+ CNHPYL + A E L Y +V+
Sbjct: 964 LTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSS 1023
Query: 60 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 119
GKL +L ++L KL+ HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R I
Sbjct: 1024 GKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAI 1083
Query: 120 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 179
D+FN + F FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V
Sbjct: 1084 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1143
Query: 180 LVLRFETVQTVEEQVRASAEHKLGVANQSITAGF 213
++ RF T +VEE++ A+ K+ + + + G
Sbjct: 1144 MIYRFVTRASVEERITQVAKRKMMLTHLVVRPGL 1177
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 135/211 (63%), Gaps = 17/211 (8%)
Query: 9 GSIGNSKGRS-VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGK 61
G++G +G++ + N VM+LR CNHPYL + AE P PP ++ GK
Sbjct: 442 GAVGKREGKTRLLNIVMQLRKCCNHPYLFE-GAE------PG---PPYTTDEHLIFNSGK 491
Query: 62 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 121
+ +LD+LL +LK RVL FS M+RLLD++EDY F+ + Y R+DG TS +R ID+
Sbjct: 492 MIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDE 551
Query: 122 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 181
+N+ +S F+FLL+ RAGG+G+NL ADTVI+FD+DWNPQ DLQA RAHRIGQK+ V V
Sbjct: 552 YNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHV 611
Query: 182 LRFETVQTVEEQVRASAEHKLGVANQSITAG 212
RF T +EE+V A KL + I G
Sbjct: 612 YRFVTENAIEEKVIERAAQKLRLDQLVIQQG 642
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 136/227 (59%), Gaps = 16/227 (7%)
Query: 12 GNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGKLEML 65
G + + N +M+LR NHPYL D P PP +V GK+ +L
Sbjct: 387 GKVEKMRLQNILMQLRKCTNHPYL-------FDGAEPG---PPYTTDTHLVYNSGKMAIL 436
Query: 66 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 125
D+LLPKL+ RVL FS MTR+LD++EDY ++ Y Y RLDG T DR I +FN
Sbjct: 437 DKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMD 496
Query: 126 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 185
+S F+F+LS RAGG+G+NL AD VII+D+DWNPQ+DLQA RAHRIGQK+ V V R
Sbjct: 497 NSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLI 556
Query: 186 TVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 232
T TVEE++ AE KL + I G +N S + ++ + +++R
Sbjct: 557 TESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIR 603
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 137/230 (59%), Gaps = 17/230 (7%)
Query: 8 LGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGK 61
L S G + N +M+LR CNHPYL D P PP +V GK
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYL-------FDGAEPG---PPYTTDMHLVTNSGK 484
Query: 62 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 121
+ +LD+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I+
Sbjct: 485 MVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINA 544
Query: 122 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 181
+N+ +S F+F+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V V
Sbjct: 545 YNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRV 604
Query: 182 LRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 230
RF T TVEE++ AE KL + + I G D N + + E L+ +
Sbjct: 605 FRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 654
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 153/265 (57%), Gaps = 25/265 (9%)
Query: 18 SVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKATD 76
S+ N +MEL+ CNHPYL E L Y +++ GK +L ++L KLK
Sbjct: 897 SLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGG 956
Query: 77 HRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSI 136
HRVL FS MT +LD++ED+ + Y+Y R+DG +G R ID++N + F+FLLS
Sbjct: 957 HRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLST 1016
Query: 137 RAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRA 196
RAGG+G+NL ADTVII+D+DWNP D+QA +RAHR+GQK V++ RF T +VEE++ +
Sbjct: 1017 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITS 1076
Query: 197 SAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR----ECKKEEAAP----------- 241
A+ K+ + + + AG + + + E L+ +LR E KEE AP
Sbjct: 1077 VAKKKMLLTHLVVRAGLGAKDGKSMSKTE-LDDVLRWGTEELFKEEEAPVEGADGEGTSS 1135
Query: 242 --------VLDDDALNDLLARSESE 258
V DD A++ LL R++ E
Sbjct: 1136 KKPNEQEIVWDDAAVDFLLDRNKEE 1160
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 137/230 (59%), Gaps = 17/230 (7%)
Query: 8 LGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGK 61
L S G + N +M+LR CNHPYL D P PP +V GK
Sbjct: 434 LNSAGKMDKMRLLNILMQLRKCCNHPYL-------FDGAEPG---PPYTTDMHLVTNSGK 483
Query: 62 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 121
+ +LD+LLPKLK RVL FS MTR+LD++EDY ++ Y Y RLDG T +R I+
Sbjct: 484 MVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINA 543
Query: 122 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 181
+N+ +S F+F+LS RAGG+G+NL AD VI++D+DWNPQVDLQA RAHRIGQ + V V
Sbjct: 544 YNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRV 603
Query: 182 LRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAEDRREYLESL 230
RF T TVEE++ AE KL + + I G D N + + E L+ +
Sbjct: 604 FRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 653
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 119/182 (65%)
Query: 21 NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVL 80
N V+EL+ CNH L + E+ L L +++ GKL +LD+LL +LK T HRVL
Sbjct: 797 NIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVL 856
Query: 81 FFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGG 140
FS M R+LDV+ DYL + + + RLDG G R +D FN + S F FLLS RAGG
Sbjct: 857 IFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGG 916
Query: 141 VGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEH 200
+G+NL ADTVIIFD+DWNPQ DLQAQARAHRIGQK V + R T ++VEEQ+ A+
Sbjct: 917 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 976
Query: 201 KL 202
K+
Sbjct: 977 KM 978
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 132/200 (66%), Gaps = 7/200 (3%)
Query: 18 SVHNSVMELRNICNHPYL---SQLHA-EEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLK 73
S+ N +MEL+ CNHPYL ++L A +E + + +++ GK +L ++L KLK
Sbjct: 883 SLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEG---TALIKNSGKFVLLQKMLRKLK 939
Query: 74 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 133
HRVL FS MTR+LD+MED ++ YRY R+DG G R ID++N + FIFL
Sbjct: 940 DGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFL 999
Query: 134 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 193
LS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHR+GQK V++ RF T ++VEE+
Sbjct: 1000 LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEK 1059
Query: 194 VRASAEHKLGVANQSITAGF 213
+ + A+ K+ + + + AG
Sbjct: 1060 ITSVAKKKMLLNHLVVRAGL 1079
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 9 GSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRL 68
G+ G++ G N VMEL+ CNH YL + EE + + L ++R GKL +LD+L
Sbjct: 743 GTRGSTSG--FLNIVMELKKCCNHCYLIKP-PEENERENGQEILLSLIRSSGKLILLDKL 799
Query: 69 LPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSP 128
L +L+ +RVL FS M R+LD++ +YLT K Y + RLDG G R +D FN S
Sbjct: 800 LTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSE 859
Query: 129 FFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQ 188
F FLLS RAGG+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T
Sbjct: 860 DFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKG 919
Query: 189 TVEEQVRASAEHKL 202
TVEE++ A+ K+
Sbjct: 920 TVEEEIIERAKKKM 933
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 145/250 (58%), Gaps = 22/250 (8%)
Query: 18 SVHNSVMELRNICNHPYLSQLHAEEVDTLI--PKHYLPPIVRLCGKLEMLDRLLPKLKAT 75
S++N +MELR +C HPY+ E V+ +I ++ CGKL++LD+++ KLK
Sbjct: 555 SLNNIMMELRKVCCHPYM----LEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQ 610
Query: 76 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 135
HRVL ++ +LD++EDY T K+++Y R+DG G +R ID+FN ++S F FLLS
Sbjct: 611 GHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLS 670
Query: 136 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 195
RAGG+G+NL ADTVII+D+DWNP DLQA ARAHR+GQ V++ R T+EE++
Sbjct: 671 TRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMM 730
Query: 196 ASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAP-----------VLD 244
+ K+ V + N + E+ L+ ++R KE A D
Sbjct: 731 QLTKKKM-VLEHLVVGKLKTQNINQEE----LDDIIRYGSKELFASEDDEAGKSGKIHYD 785
Query: 245 DDALNDLLAR 254
D A++ LL R
Sbjct: 786 DAAIDKLLDR 795
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 184 bits (467), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/264 (42%), Positives = 149/264 (56%), Gaps = 27/264 (10%)
Query: 8 LGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGK 61
L S G + N +M+LR CNHPYL D P PP IV GK
Sbjct: 442 LNSSGKMDKMRLLNILMQLRKCCNHPYL-------FDGAEPG---PPYTTDEHIVGNSGK 491
Query: 62 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 121
+ LD+LL ++K RVL FS MTRLLD++EDY ++ Y Y RLDG T +R ID
Sbjct: 492 MVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDA 551
Query: 122 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 181
FN +S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRIGQK+ V V
Sbjct: 552 FNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRV 611
Query: 182 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRE-------C 234
R T TVEE++ AE KL + + I G + S + +E + ++R C
Sbjct: 612 FRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFAC 671
Query: 235 KKEEAAPVLDDDALNDLLARSESE 258
K+ E L D+ + +L R E +
Sbjct: 672 KESE----LTDEDIVTILERGEKK 691
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/257 (41%), Positives = 146/257 (56%), Gaps = 29/257 (11%)
Query: 21 NSVMELRNICNHPYL-------------SQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDR 67
N V+EL+ NHPYL SQ +EV L ++ GK+ +LD+
Sbjct: 646 NIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEV--------LKGLIMNSGKMVLLDK 697
Query: 68 LLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDS 127
LL +L+ HRVL FS M R+LD++ DYL+ + Y + RLDG R ID FN +S
Sbjct: 698 LLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNS 757
Query: 128 PFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETV 187
P F+FLLS RAGG+G+NL ADTVIIFD+DWNPQ DLQA ARAHRIGQK V+V R +
Sbjct: 758 PDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSK 817
Query: 188 QTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRR---EYLESLLR-----ECKKEEA 239
T+EE V A K+ + I+ G D ++++ + E L ++L+ K E
Sbjct: 818 DTIEEDVLERARRKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNMFKAENN 877
Query: 240 APVLDDDALNDLLARSE 256
L+D L+++L +E
Sbjct: 878 QKKLEDMNLDEILEHAE 894
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 124/206 (60%), Gaps = 6/206 (2%)
Query: 18 SVHNSVMELRNICNHPYLSQLHAEEV------DTLIPKHYLPPIVRLCGKLEMLDRLLPK 71
S+ N + EL+ NHPYL E V + ++ L ++ GK+ +LD+LL +
Sbjct: 647 SLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTR 706
Query: 72 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 131
LK HRVL FS M R+LD++ DYL+ K + RLDG R ID FN DS F+
Sbjct: 707 LKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFV 766
Query: 132 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 191
FLLS RAGG+G+NL ADTV+IFD+DWNPQ DLQA ARAHRIGQK V+V R + TVE
Sbjct: 767 FLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVE 826
Query: 192 EQVRASAEHKLGVANQSITAGFFDNN 217
E+V A K+ + I+ G D N
Sbjct: 827 EEVLERARKKMILEYAIISLGVTDGN 852
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 133/202 (65%), Gaps = 16/202 (7%)
Query: 17 RSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGKLEMLDRLLP 70
+ + N M+LR CNHPYL Q AE P PP +V GK+ +LD+LLP
Sbjct: 493 KRLLNIAMQLRKCCNHPYLFQ-GAE------PG---PPYTTGEHLVENAGKMVLLDKLLP 542
Query: 71 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 130
KLK D RVL FS MTRLLD++EDYL ++ Y+Y R+DG+T G DR A I+ FN+ S F
Sbjct: 543 KLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKF 602
Query: 131 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 190
+FLLS RAGG+G+NL AD V+++D+DWNPQ DLQAQ RAHRIGQK++V V RF T T+
Sbjct: 603 VFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTI 662
Query: 191 EEQVRASAEHKLGVANQSITAG 212
EE+V A KL + I G
Sbjct: 663 EEKVIERAYKKLALDALVIQQG 684
>sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3
Length = 3230
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 130/228 (57%), Gaps = 23/228 (10%)
Query: 4 VEENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLE 63
+E L S + R +H R +CN + T P L I CGKL+
Sbjct: 2006 FQEQLASELWPRARPLH------RIVCN-----------MRTQFPDLRL--IQYDCGKLQ 2046
Query: 64 MLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFN 123
L LL +LKA HRVL F+ MTR+LDV+E +LT+ + YLRLDG T R AL+++FN
Sbjct: 2047 TLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFN 2106
Query: 124 QQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLR 183
D F F+LS R+GGVGVNL ADTV+ +D+DWNP +D QAQ R HRIGQ RDV + R
Sbjct: 2107 A-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 2165
Query: 184 FETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL 231
+ +TVEE + A K + + +I G F T+A +++ + L
Sbjct: 2166 LISERTVEENILKKANQKRMLGDMAIEGGNF---TTAYFKQQTIRELF 2210
>sp|O14148|INO80_SCHPO Putative DNA helicase ino80 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ino80 PE=1 SV=4
Length = 1604
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 113/164 (68%), Gaps = 4/164 (2%)
Query: 52 LPPIVRLC---GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDG 108
+P ++R GKL LD+LL +LKA DHRVL + MTR++D+ME+YLTF+QY+YLRLDG
Sbjct: 1418 IPSMLRFIADSGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDG 1477
Query: 109 HTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQA 168
+ R ++ ++ Q F+FLLS RAGG+G+NL AADTVI +D+DWNP +D QA
Sbjct: 1478 SSKISQRRDMVTEW-QTRPELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMD 1536
Query: 169 RAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAG 212
RAHRIGQ++ V V RF T T+EE++ A+ K V I+ G
Sbjct: 1537 RAHRIGQQKQVTVYRFITRGTIEERIVIRAKEKEEVQKVVISGG 1580
>sp|A2R9H9|INO80_ASPNC Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=ino80 PE=3 SV=1
Length = 1697
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 125/213 (58%), Gaps = 18/213 (8%)
Query: 52 LPPIVRLC---GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDG 108
+P + R GKL LD LL +LKA HRVL + MTR++D+ME+YLT++ Y+Y RLDG
Sbjct: 1395 VPSMRRFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDG 1454
Query: 109 HTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQA 168
T DR + F QQ F+FLLS RAGG+G+NL AADTVI +D+DWNP +D QA
Sbjct: 1455 STKLEDRRDTVADF-QQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMD 1513
Query: 169 RAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSIT---AGFFDNNTSAEDRRE 225
RAHR+GQ R V V R T T+EE++R A K V IT AG D NT
Sbjct: 1514 RAHRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVITGGAAGGVDFNTRN----- 1568
Query: 226 YLESLLRECKKEEAAPVLDDDALNDLLARSESE 258
RE + ++ A L DD +L+ + E E
Sbjct: 1569 ------RESRTKDIAMWLADDEQAELIEQKEKE 1595
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/244 (44%), Positives = 138/244 (56%), Gaps = 30/244 (12%)
Query: 8 LGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGK 61
L S G + N +M+LR CNHPYL D P PP IV GK
Sbjct: 438 LNSSGKMDKMRLLNILMQLRKCCNHPYL-------FDGAEPG---PPYTTDEHIVSNSGK 487
Query: 62 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHT----------- 110
+ +LD+LL KLK RVL FS MTRLLD++EDY ++ Y Y RLDG T
Sbjct: 488 MVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLE 547
Query: 111 --SGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQA 168
G R A I+ FN +S FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA
Sbjct: 548 VEFLGQREA-IEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMD 606
Query: 169 RAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLE 228
RAHRIGQK+ V V R T TVEE++ AE KL + + I G + S + +E +
Sbjct: 607 RAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEML 666
Query: 229 SLLR 232
++R
Sbjct: 667 QMIR 670
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 130/202 (64%), Gaps = 16/202 (7%)
Query: 17 RSVHNSVMELRNICNHPYLSQLHAE------EVDTLIPKHYLPPIVRLCGKLEMLDRLLP 70
+ + N M+LR CNHPYL Q AE D LI GK+ +LD+LLP
Sbjct: 451 KRLLNIAMQLRKCCNHPYLFQ-GAEPGPPYTTGDHLITN---------AGKMVLLDKLLP 500
Query: 71 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 130
KLK D RVL FS MTRLLD++EDYL ++ Y Y R+DG+T G +R A I+ +N+ S F
Sbjct: 501 KLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKF 560
Query: 131 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 190
+FLLS RAGG+G+NL AD VI++D+DWNPQVDLQAQ RAHRIGQK++V V RF T +
Sbjct: 561 VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAI 620
Query: 191 EEQVRASAEHKLGVANQSITAG 212
EE+V A KL + I G
Sbjct: 621 EEKVIERAYKKLALDALVIQQG 642
>sp|Q9NDJ2|DOM_DROME Helicase domino OS=Drosophila melanogaster GN=dom PE=1 SV=2
Length = 3198
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 130/218 (59%), Gaps = 13/218 (5%)
Query: 1 MKRVEENLGSIGNSKGRSVHNSV-MELRNICNHPYLSQLH--AEEVDTLIPKHYLPPIVR 57
++R +NL S + + N V LR P L+ LH E+ T P P +++
Sbjct: 1603 IRRYVQNLSSTHWQHEQRIENIVDQALR-----PKLALLHPIISEMTTKFPD---PRLIQ 1654
Query: 58 L-CGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRG 116
CGKL+ +DRLL +LK HRVL F+ MT++LDV+E +L + + YLRLDG T R
Sbjct: 1655 YDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQ 1714
Query: 117 ALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQK 176
L+++FN D F F+LS R+GGVG+NL ADTVI +D+DWNP +D QAQ R HRIGQ
Sbjct: 1715 ILMERFNG-DKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQT 1773
Query: 177 RDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFF 214
RDV + R + +T+E + A K +++ +I G F
Sbjct: 1774 RDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNF 1811
>sp|Q0CA78|INO80_ASPTN Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 /
FGSC A1156) GN=ino80 PE=3 SV=1
Length = 1690
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 121/202 (59%), Gaps = 15/202 (7%)
Query: 60 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALI 119
GKL LD LL +LKA HRVL + MTR++D+ME+YLT++ Y+Y RLDG T DR +
Sbjct: 1399 GKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTV 1458
Query: 120 DKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDV 179
F QQ F+FLLS RAGG+G+NL AADTVI +D+DWNP +D QA RAHR+GQ R V
Sbjct: 1459 ADF-QQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQV 1517
Query: 180 LVLRFETVQTVEEQVRASAEHKLGVANQSIT---AGFFDNNTSAEDRREYLESLLRECKK 236
V R T T+EE++R A K V IT AG D NT RE +
Sbjct: 1518 TVYRLITRGTIEERIRKRALQKEEVQRVVITGGAAGGVDFNTRN-----------RESRT 1566
Query: 237 EEAAPVLDDDALNDLLARSESE 258
++ A L DD +L+ + E E
Sbjct: 1567 KDIAMWLADDEQAELIEQKEKE 1588
>sp|Q5BAZ5|INO80_EMENI Putative DNA helicase ino80 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ino80 PE=3
SV=1
Length = 1612
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 125/213 (58%), Gaps = 18/213 (8%)
Query: 52 LPPIVRLC---GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDG 108
+P + R GKL LD LL +LKA HRVL + MTR++D+ME+YLT++ Y+Y RLDG
Sbjct: 1310 VPSMRRFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDG 1369
Query: 109 HTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQA 168
T DR + F QQ F+FLLS RAGG+G+NL AADTVI +D+DWNP +D QA
Sbjct: 1370 STKLEDRRDTVADF-QQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMD 1428
Query: 169 RAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSIT---AGFFDNNTSAEDRRE 225
RAHR+GQ R V V R T T+EE++R A K V I+ AG D NT
Sbjct: 1429 RAHRLGQTRQVTVYRLITRSTIEERIRKRALQKEEVQRVVISGGAAGGVDFNTRN----- 1483
Query: 226 YLESLLRECKKEEAAPVLDDDALNDLLARSESE 258
R+ K ++ A L DD +L+ + E E
Sbjct: 1484 ------RDSKTKDIAMWLADDEQAELIEQKERE 1510
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 121/207 (58%), Gaps = 16/207 (7%)
Query: 12 GNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGKLEML 65
G + + N +M LR NHPYL D P PP +V GK+ +L
Sbjct: 391 GKVEKARLMNILMHLRKCVNHPYL-------FDGAEPG---PPFTTDQHLVDNSGKMVVL 440
Query: 66 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 125
D+LL K K RVL FS +R+LD++ED+ ++ Y Y RLDG T DR I+ +N
Sbjct: 441 DKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAP 500
Query: 126 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 185
DS FIF+L+ RAGG+G+NL AD VII+D+DWNPQ DLQA RAHRIGQK+ V V R
Sbjct: 501 DSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLI 560
Query: 186 TVQTVEEQVRASAEHKLGVANQSITAG 212
T TV+E++ AE KL + N I G
Sbjct: 561 TENTVDERIIEKAEAKLRLDNIVIQQG 587
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.125 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 875,837,132
Number of Sequences: 539616
Number of extensions: 40931149
Number of successful extensions: 121547
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 2108
Number of HSP's that attempted gapping in prelim test: 102172
Number of HSP's gapped (non-prelim): 14746
length of query: 2260
length of database: 191,569,459
effective HSP length: 134
effective length of query: 2126
effective length of database: 119,260,915
effective search space: 253548705290
effective search space used: 253548705290
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 70 (31.6 bits)