BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000101
(2239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1
Length = 2193
Score = 2755 bits (7142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1519/2257 (67%), Positives = 1749/2257 (77%), Gaps = 89/2257 (3%)
Query: 3 SGGGPSRNRAASTS--SAASPSSSSSAVSTPHLGFDSLQQQQQHQQQQQRQPFQQQILRK 60
SGGGP+RN A + +A++ S++S + S+ + QQQQQ QQQQ QQQ R
Sbjct: 6 SGGGPARNPAMGPAGRTASTSSAASPSSSSSSVQQQQQQQQQQQQQQQLASRQQQQQHRN 65
Query: 61 PDGNEAILAYQVGSLPGLMGGGNFASPPGSMQPPQQSRKFFDFAQQHAISQESQNRSQGV 120
D NE + AYQ G + G+MGGGNFAS PGSMQ PQQSR FF+ QQ Q+ + +Q
Sbjct: 66 SDTNENMFAYQPGGVQGMMGGGNFASSPGSMQMPQQSRNFFESPQQQQQQQQQGSSTQEG 125
Query: 121 EHQLLNPVHQAYMQYALQAQQKSASVLQSQQQAKLGMLGPAS-GKDQDMRMGNLKMQELI 179
+ Q NP+ QAY+Q+A+QAQ + A QQA++GM+G +S GKDQD RMG L MQ+L
Sbjct: 126 Q-QNFNPMQQAYIQFAMQAQHQKAQ-----QQARMGMVGSSSVGKDQDARMGMLNMQDL- 178
Query: 180 SMQSANQAQASSSKNSSEQFGRGEKQMEQPQQQVSDQKGEPKPPSQQTLGGQGMAANIIR 239
++Q QASSSK S +QF RGE+Q E QQ ++ K P+ QQ GQ M N+IR
Sbjct: 179 --NPSSQPQASSSKPSGDQFARGERQTESSSQQRNETKSHPQ---QQVGTGQLMPGNMIR 233
Query: 240 PMQAAQHQQSIQNAAGNQLAMAAQ---LQAWALERNIDLSQPANASLIAQLIPIMQSRIV 296
PMQA Q QQ + N NQLA A Q +QAWA ERNIDLS PANAS Q+ I+Q+R+
Sbjct: 234 PMQAPQAQQLVNNMGNNQLAFAQQWQAMQAWARERNIDLSHPANAS---QMAHILQARMA 290
Query: 297 ANHKANESNMGAPSSPVPVSKQQVTSPTIAGENSPHANSSSDVSGQSGSAKARPTVSPSP 356
A KA E N+ + S +P+S Q +S + GENSPHANS+SD+SGQSGSAKAR +S
Sbjct: 291 AQQKAGEGNVASQSPSIPISSQPASSSVVPGENSPHANSASDISGQSGSAKARHALSTGS 350
Query: 357 LGSTTSAAVVNNVNNISLQQFSVHGRDNQVPSRQPVAIGNGLPPIHPPQTSLNMTPGVDQ 416
ST+S +VN N FS GR+N + R V NG+P +P QTS N TP +DQ
Sbjct: 351 FASTSSPRMVNPAMN----PFSGQGRENPMYPRHLVQPTNGMPSGNPLQTSANETPVLDQ 406
Query: 417 PLPVKNSSGP-ENSQMQYLRQLNRSSPQSAIPSSDGSSANNFSSQGGLATQMPQQRLGFT 475
K S GP E+ QMQ RQLN +P PS G +N+ S Q G TQ QQR GFT
Sbjct: 407 NASTKKSLGPAEHLQMQQPRQLNTPTPNLVAPSDTGPLSNS-SLQSGQGTQQAQQRSGFT 465
Query: 476 KHQLHVLKAQILAFRRLKKGEGTLPQELLRAIVPPSLELQQQPAQQQFLPAAVNNQDRVS 535
K QLHVLKAQILAFRRLKKGEG+LP ELL+AI PP LELQ Q+Q PA QDR S
Sbjct: 466 KQQLHVLKAQILAFRRLKKGEGSLPPELLQAISPPPLELQ---TQRQISPAIGKVQDRSS 522
Query: 536 GKIAEDQLRHLESNGKDAQAVSSSNVQSLPKEEAYAGDDKAAVSPV-GQGMSAVTKEPAP 594
K EDQ R LE GK++QA +SSN KEE GD + A++ Q + KE
Sbjct: 523 DKTGEDQARSLEC-GKESQAAASSNGPIFSKEEDNVGDTEVALTTGHSQLFQNLGKEATS 581
Query: 595 VVVPGKEEQQAPVSSVKSDQEVECGLLRTQQQSDFPADRGKSVAPQVSACDAVQVKKPAQ 654
V KEEQQ V VKSDQ + + +SD AD+GK+V A D Q K P Q
Sbjct: 582 TDVATKEEQQTDVFPVKSDQGADSSTQKN-PRSDSTADKGKAV-----ASDGSQSKVPPQ 635
Query: 655 ATTALQPKDVGAARKYHGPLFDFPFFTRKHDSVGSTAMVNSSNNLTLAYDVKDLLSEEGL 714
A + PKD +ARKY+GPLFDFPFFTRK DS GS A N++NNLTLAYD+KDL+ EEG
Sbjct: 636 ANSPQPPKDTASARKYYGPLFDFPFFTRKLDSYGS-ATANANNNLTLAYDIKDLICEEGA 694
Query: 715 EVLQKKRSENLKKISGILAVNLERKRIRPDLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQ 774
E L KKR+++LKKI+G+LA NLERKRIRPDLVLRLQIE+KKLRL DLQSR+R+EVD+QQQ
Sbjct: 695 EFLSKKRTDSLKKINGLLAKNLERKRIRPDLVLRLQIEEKKLRLSDLQSRVREEVDRQQQ 754
Query: 775 EIMAMPDRQYRKFVRLCERQRVELMRQVQTSQKAMREKQLKSISQWRKKLLEAHWAIRDA 834
EIM+MPDR YRKFVRLCERQR+E+ RQV +QKA+REKQLK+I QWRKKLLEAHWAIRDA
Sbjct: 755 EIMSMPDRPYRKFVRLCERQRLEMNRQVLANQKAVREKQLKTIFQWRKKLLEAHWAIRDA 814
Query: 835 RTARNRGVAKYHERILREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAER 894
RTARNRGVAKYHE++LREFSKRKDD RNKRMEALKNNDVERYREMLLEQQT++PGDAAER
Sbjct: 815 RTARNRGVAKYHEKMLREFSKRKDDGRNKRMEALKNNDVERYREMLLEQQTNMPGDAAER 874
Query: 895 YAVLSSFLTQTEEYLYKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAG 954
YAVLSSFLTQTE+YL+KLG KITA KNQQEVEEAANAAA AARLQGLSEEEVR+AA CA
Sbjct: 875 YAVLSSFLTQTEDYLHKLGGKITATKNQQEVEEAANAAAVAARLQGLSEEEVRAAATCAR 934
Query: 955 EEVMIRNRFLEMNAPRDGSSVNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLS 1014
EEV+IRNRF EMNAP++ SSVNKYY+LAHAVNE V+RQPSML+AGTLRDYQ+VGLQWMLS
Sbjct: 935 EEVVIRNRFTEMNAPKENSSVNKYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLS 994
Query: 1015 LYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLP 1074
LYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELH WLP
Sbjct: 995 LYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLP 1054
Query: 1075 SVSCIYYVGAKDQRSRLFSQ-VAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRM 1133
SVSCIYYVG KDQRS+LFSQ V A+KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRM
Sbjct: 1055 SVSCIYYVGTKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRM 1114
Query: 1134 KDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPF 1193
KDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLP+VFDNRKAFHDWF+QPF
Sbjct: 1115 KDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPF 1174
Query: 1194 QKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSA 1253
QKEGP HN +DDWLETEKKVI+IHRLHQILEPFMLRRRVEDVEGSLP KVS+VLRCRMSA
Sbjct: 1175 QKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSA 1234
Query: 1254 IQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPY 1313
IQSA+YDWIKATGTLRVDP+DEK R QKNPIYQAK+Y+TLNNRCMELRK CNHPLLNYPY
Sbjct: 1235 IQSAVYDWIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPY 1294
Query: 1314 FSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRI 1373
F+D SKDFLV+SCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWR+LVYRRI
Sbjct: 1295 FNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRI 1354
Query: 1374 DGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQA 1433
DGTTSLEDRESAIVDFN D+DCFIFLLSIRAAGRGLNLQ+ADTV+IYDPDPNPKNEEQA
Sbjct: 1355 DGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQA 1414
Query: 1434 VARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLI 1493
VARAHRIGQ REVKVIYMEAVV+K+SSHQKEDELRSGG+VDLEDD+AGKDRYIGSIEGLI
Sbjct: 1415 VARAHRIGQTREVKVIYMEAVVEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLI 1474
Query: 1494 RNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRM 1553
RNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSL EVNRM
Sbjct: 1475 RNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRM 1534
Query: 1554 IARSEDEVELFDQMDEEFGWIEEMTRYDQVPKWLRASTKEVNATIANLSKKPSKNILFGS 1613
IARSE+EVELFDQMDEEF W EEMT ++QVPKWLRAST+EVNAT+A+LSKKPSKN+L S
Sbjct: 1535 IARSEEEVELFDQMDEEFDWTEEMTNHEQVPKWLRASTREVNATVADLSKKPSKNMLSSS 1594
Query: 1614 NIGVDSGEIETERKRG-PKGKKYPNYKEVDDEIGEYSEASSDERNGYPVQEEEGEIGEFE 1672
N+ V G ERKRG PK KK NYKE++D+I YSE SS+ERN EEEG+I +F+
Sbjct: 1595 NLIVQPGGPGGERKRGRPKSKKI-NYKEIEDDIAGYSEESSEERNIDSGNEEEGDIRQFD 1653
Query: 1673 DDEYSGAVGAPLSNKDQSEEDGPVCEGGYDYLRPSENTRNNHVVEEAGSSGSSSNSRRLT 1732
DDE +GA+G +NK + + + PVC GYDY S + + N ++AGSSGSS S R
Sbjct: 1654 DDELTGALGDHQTNKGEFDGENPVC--GYDYPPGSGSYKKNPPRDDAGSSGSSPESHRSK 1711
Query: 1733 QIVSPVSPQKFGSLSALEARPGSLSKRMPDELEEGEIAVSGDSHMDHQQSGSWTHDRDEG 1792
++ SPVS QKFGSLSAL+ RPGS+SKR+ D+LEEGEIA SGDSH+D Q+SGSW HDRDEG
Sbjct: 1712 EMASPVSSQKFGSLSALDTRPGSVSKRLLDDLEEGEIAASGDSHIDLQRSGSWAHDRDEG 1771
Query: 1793 EDEQVLQPKIKRKRSIRVRPRHTVERPEERSCTDTPLHRGDSSLLPFQMDNKYPAQLRTD 1852
++EQVLQP IKRKRSIR+RPR T ER + ++ P + P Q+D Y ++LRT
Sbjct: 1772 DEEQVLQPTIKRKRSIRLRPRQTAERVD---GSEMPAAQ------PLQVDRSYRSKLRTV 1822
Query: 1853 TEMKAHGESNSLRHDQSEPSSKSRRNLPSRKIANAPKSR-ASLKTGRLNCMPGHTEDAAD 1911
+ +H SS R++P++K+A+ K +S K+GRLN ED A+
Sbjct: 1823 VD--SHSSRQD-----QSDSSSRLRSVPAKKVASTSKLHVSSPKSGRLNATQLTVEDNAE 1875
Query: 1912 HFKESWDGKIANASGSSNFSAKMSDVIQRRCKNVISKLQRRIEKEGHQIVPLLTDLWKRI 1971
+E+WDG + SSN A+MS +IQ+RCK VISKLQRRI+KEG QIVP+LT+LWKRI
Sbjct: 1876 ASRETWDG--TSPISSSNAGARMSHIIQKRCKIVISKLQRRIDKEGQQIVPMLTNLWKRI 1933
Query: 1972 ETSGYVSGAGNNILDLRKIDQRVDRLEYNGVMELVSDVQFMLKGAMQFYGFSHEVRSEAR 2031
+ +GY +G NN+L+LR+ID RV+RLEY GVMEL SDVQ ML+GAMQFYGFSHEVRSEA+
Sbjct: 1934 Q-NGYAAGGVNNLLELREIDHRVERLEYAGVMELASDVQLMLRGAMQFYGFSHEVRSEAK 1992
Query: 2032 KVHDLFFDLLKIAFPDTDFREARSALSFTGPLSTSVSTPSPRQTTVGQSKRHKIINEMEP 2091
KVH+LFFDLLK++FPDTDFREAR+ALSF+G T VSTP+PR + Q KR K++NE E
Sbjct: 1993 KVHNLFFDLLKMSFPDTDFREARNALSFSGSAPTLVSTPTPRGAGISQGKRQKLVNEPET 2052
Query: 2092 GPSPPQKPPQRGSVPVSEDSRIRVQIPQKESRLGSGSGSSREQSQPDDSP---HPGELVI 2148
PS PQ+ QR E+SRIRVQIPQKE++LG + S D+SP HPGELVI
Sbjct: 2053 EPSSPQRSQQR------ENSRIRVQIPQKETKLGGTT------SHTDESPILAHPGELVI 2100
Query: 2149 CKKKRKDREKSVVKPRS----VSGPVSPPSLGRNIKSPGLGLVPKDMRHTQQTTHQHGWA 2204
CKKKRKDREKS K R+ P +GR ++SP G VP++ R Q Q W
Sbjct: 2101 CKKKRKDREKSGPKTRTGGSSSPVSPPPAMIGRGLRSPVSGGVPRETRLAQ----QQRWP 2156
Query: 2205 NQPAQPANGGSG--AVGWANPVKRLRTDAGKRRPSQL 2239
NQP P N G+ +VGWANPVKRLRTD+GKRRPS L
Sbjct: 2157 NQPTHPNNSGAAGDSVGWANPVKRLRTDSGKRRPSHL 2193
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust.
Identities = 308/842 (36%), Positives = 459/842 (54%), Gaps = 111/842 (13%)
Query: 751 IEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVE------LMRQVQT 804
IE + LRLL+ Q LR+ ++ ++ R R +RQ ++ + + Q
Sbjct: 646 IELRCLRLLEKQRSLRETINSVIPHSDSLAAGNLRLMFRNVKRQTMQEANLVLALAEKQK 705
Query: 805 SQKAMREKQ-----LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERILREFSKRKDD 859
++ AMR+K+ L+SI RK ++ A+T R + + +H + +E KR +
Sbjct: 706 TEHAMRQKEKLLTHLRSIMLHRKSIVTKVDKQNKAKTQRCKDIINFHAHLEKEEKKRIER 765
Query: 860 DRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKLGSKITAA 919
+R++AL+ +D Y ++L D A+ + + L QT++YL L +
Sbjct: 766 SARQRLQALRADDEAAYLQLL---------DKAKDTRI-THLLKQTDQYLENLTRAVRIQ 815
Query: 920 KNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAGEEVMIRNRFLEMNAPRDGSSVNKYY 979
++ + + +A L+ EE ++ Y+
Sbjct: 816 QSNIHSGNTSGKGSNSAELEAPISEEDKNL---------------------------DYF 848
Query: 980 SLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMAL 1039
+AH ++E V QP + GTL+DYQ+ GL+WMLSLYNN LNGILADEMGLGKT+Q +A
Sbjct: 849 KVAHRIHEEV-EQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAF 907
Query: 1040 IAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAALK 1099
I YL+E K GP LIIVP + L NW E KW PSV I Y G R L SQ+ +
Sbjct: 908 ITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQIRSSN 967
Query: 1100 FNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDR-YRCQRRLLLTGT 1158
FNVL+TT+E+I+ DR LS++ W ++IIDE R+K+ +S L L Y Q RL+LTGT
Sbjct: 968 FNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGT 1027
Query: 1159 PLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHR 1218
PLQN+L ELW+LLN +LP++F++ K+F +WF+ PF G D L E+ ++II R
Sbjct: 1028 PLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTG---GQDKIGLNEEEALLIIKR 1084
Query: 1219 LHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRR 1278
LH++L PF+ RR +DVE LP KV V++C +S +Q +Y +K G L VD E K
Sbjct: 1085 LHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTG 1144
Query: 1279 VQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSK---------DFLVKSCGKL 1329
+ K L N M+L+K CNHP + F D+ + D L ++ GK
Sbjct: 1145 I-----------KGLQNTVMQLKKICNHPFI----FEDVERAIDPSGTNVDLLWRAAGKF 1189
Query: 1330 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDF 1389
+LDRIL KL TGH+ L+F MT+++ I+E+YL+ + Y R+DG+T +DR S + F
Sbjct: 1190 ELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQF 1249
Query: 1390 NSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1449
N SD +IF+LS RA G GLNLQ+ADTVII+D D NP + QA RAHRIGQ +EV+++
Sbjct: 1250 NDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRIL 1309
Query: 1450 YMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVI 1509
+ I+ E+ + S QYK+D+ +VI
Sbjct: 1310 RL------ITEKSIEENILSRA---------------------------QYKLDLDGKVI 1336
Query: 1510 NAGRFDQRTTHEERRMTLETLL-HDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMD 1568
AG+FD ++T EER L +LL HD + + + E+N +I+R+++E+ LF ++D
Sbjct: 1337 QAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQDDELNELISRTDEELVLFKKLD 1396
Query: 1569 EE 1570
+E
Sbjct: 1397 KE 1398
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/640 (42%), Positives = 382/640 (59%), Gaps = 72/640 (11%)
Query: 978 YYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVM 1037
YYS+AH ++E+V+ Q S++ GTL++YQI GL+W++SLYNN LNGILADEMGLGKT+Q +
Sbjct: 750 YYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTI 809
Query: 1038 ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAA 1097
+L+ YLM+ K GP+LIIVP + L NW E KW P+V + Y G+ R L +Q+ A
Sbjct: 810 SLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRA 869
Query: 1098 LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLLT 1156
KFNVL+TTYE+++ D++ L+K+ WKY+IIDE RMK+ L + L+ Y RLLLT
Sbjct: 870 TKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLT 929
Query: 1157 GTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIII 1216
GTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+ ++II
Sbjct: 930 GTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG-----EKVELNEEETILII 984
Query: 1217 HRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEK 1276
RLH++L PF+LRR ++VE LP KV +++C MSA+Q +Y +++ G L D ++
Sbjct: 985 RRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKG 1044
Query: 1277 RRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF--------------L 1322
+ K L N ++LRK CNHP + F + + + L
Sbjct: 1045 KH-------GKGGAKALMNTIVQLRKLCNHPFM----FQHIEEKYCDHTGGHGVVSGPDL 1093
Query: 1323 VKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDR 1382
+ GK +LDRIL KL+ T HRVLLF MT+ + I+E+YL WRQ Y R+DGTT EDR
Sbjct: 1094 YRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDR 1153
Query: 1383 ESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQ 1442
+ FN+ SD F+FLLS RA G GLNLQ+ADTV+I+D D NP + QA RAHRIGQ
Sbjct: 1154 GELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQ 1213
Query: 1443 KREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKI 1502
+ EV+V+ + V S+E I +YK+
Sbjct: 1214 RNEVRVLRLMTV--------------------------------NSVEERIL-AAARYKL 1240
Query: 1503 DMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEVE 1562
+M ++VI AG FDQ++T ER+ L+T+LH ++ +E ++VP + +N MIARSE+E+E
Sbjct: 1241 NMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIARSEEEIE 1300
Query: 1563 LFDQMDEE--------FGWIEEMTRYDQVPKWLRASTKEV 1594
+F +MD E E + ++P WL EV
Sbjct: 1301 IFKRMDAERKKEDEEIHPGRERLIDESELPDWLTKDDDEV 1340
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 27/194 (13%)
Query: 744 DLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVELMRQVQ 803
DL L+ IE + LR+L+ Q +LR E Q + + + ++L +R + + +R+ +
Sbjct: 436 DLRLQAAIELRALRVLNFQRQLRMEFVQCTRRDTTL---ETALNIKLYKRTKRQGLREAR 492
Query: 804 TSQKAMREKQLKSISQWRKKLLEAHWAI-------------RDARTAR-NRGVAKYHERI 849
++K ++++L++ + R+K LE A+ A+ AR N+ V +H
Sbjct: 493 ATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQLARMNKAVMNHHANA 552
Query: 850 LREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYL 909
RE K ++ +RM L D E YR+++ +++ +R A L L+QT+EY+
Sbjct: 553 EREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKD-------KRLAFL---LSQTDEYI 602
Query: 910 YKLGSKITAAKNQQ 923
L + K+ Q
Sbjct: 603 SNLTQMVKQHKDDQ 616
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust.
Identities = 328/849 (38%), Positives = 466/849 (54%), Gaps = 127/849 (14%)
Query: 751 IEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCER-----QRVELMRQVQTS 805
+E KKLRL+ Q LR +V Q + + + R C R Q L ++
Sbjct: 199 VELKKLRLIKQQESLRHQVMHCQPHLRTIVNAVERMS---CRRPKLVPQATRLTEVLERQ 255
Query: 806 QKAMREKQLKSISQWRKKLLEAHWAIRDART----AR----NRGVAKYHERILREFSKRK 857
Q++ RE++LK + + AH + RT AR NR V YH I +E +R
Sbjct: 256 QRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQARAQKANRAVLAYHSHIEKEEQRRA 315
Query: 858 DDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKLGSKIT 917
+ + +R++ALK ND E Y +++ D A+ + + L QT+ YL
Sbjct: 316 ERNAKQRLQALKENDEEAYLKLI---------DQAKDTRI-THLLRQTDHYL-------- 357
Query: 918 AAKNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAGEEVMIRNRFLEMNAPRDGSSVNK 977
++ AAA ++Q A +E M R MN P D ++
Sbjct: 358 ------------DSLAAAVKVQQ------SQFGESAYDEDMDRR----MN-PEDDRKID- 393
Query: 978 YYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVM 1037
YY++AH + E V QPS+L G L++YQ+ GLQWM+SLYNN LNGILADEMGLGKT+Q +
Sbjct: 394 YYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTI 453
Query: 1038 ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAA 1097
+LI +L+E K GP L+IVP + L NW E +W PS+ I Y G R L QV
Sbjct: 454 SLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQVRH 513
Query: 1098 LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQR-RLLLT 1156
F VL+TTYE+I+ DR LS++ W Y+IIDE RMK+ +S L L Y R RL+LT
Sbjct: 514 SNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILT 573
Query: 1157 GTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIII 1216
GTPLQN+L ELW+LLN +LP +F++ K+F +WF+ PF G D L E+ +++I
Sbjct: 574 GTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTG---GQDKMELTEEESLLVI 630
Query: 1217 HRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEK 1276
RLH++L PF+LRR +DVE LP KV V+RC+MS +Q +Y +K G L V ED K
Sbjct: 631 RRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYV--EDAK 688
Query: 1277 RRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSK---------DFLVKSCG 1327
R K I K L N M+L+K CNHP + F D+ + D L + G
Sbjct: 689 R--GKTGI------KGLQNTVMQLKKICNHPFV----FEDVERSIDPTGFNYDMLWRVSG 736
Query: 1328 KLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIV 1387
K +LDRIL KL R+GHR+L+F MT++++I+E+YL +RQ Y R+DG+T +DR +
Sbjct: 737 KFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLG 796
Query: 1388 DFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVK 1447
FN ++ +FLLS RA G GLNLQ+ADTVII+D D NP + QA RAHRIGQ +EV+
Sbjct: 797 VFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVR 856
Query: 1448 VIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADE 1507
+ + + +K +E+++ + QYK+D+ +
Sbjct: 857 IYRL--ITEK----------------SVEENILAR---------------AQYKLDIDGK 883
Query: 1508 VINAGRFDQRTTHEERRMTLETLLHDEERYQET-----VHDVPSLQEVNRMIARSEDEVE 1562
VI AG+FD ++T EER L +LL +E +E + D E+N ++AR +DE+
Sbjct: 884 VIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDD----DELNEILARGDDELR 939
Query: 1563 LFDQMDEEF 1571
LF QM E+
Sbjct: 940 LFKQMTEDL 948
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 490 bits (1261), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/607 (43%), Positives = 365/607 (60%), Gaps = 66/607 (10%)
Query: 978 YYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVM 1037
YY++AHA++ERV +Q ++L GTL+ YQ+ GL+WM+SLYNN LNGILADEMGLGKT+Q +
Sbjct: 706 YYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTI 765
Query: 1038 ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAA 1097
ALI YLME K GP+LIIVP + L NW E KW PSV I Y G R L Q+ +
Sbjct: 766 ALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRS 825
Query: 1098 LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLLT 1156
KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RR+LLT
Sbjct: 826 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLT 885
Query: 1157 GTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIII 1216
GTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+ ++II
Sbjct: 886 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-----LNEEETILII 940
Query: 1217 HRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEK 1276
RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D ++
Sbjct: 941 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 1000
Query: 1277 RRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF--------------- 1321
++ KTL N M+LRK CNHP + F + + F
Sbjct: 1001 KK-------GKGGAKTLMNTIMQLRKICNHPYM----FQHIEESFAEHLGYSNGVINGAE 1049
Query: 1322 LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLED 1381
L ++ GK +LDRIL KL+ T HRVLLF MT L+ I+E+Y +R +Y R+DGTT ED
Sbjct: 1050 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1109
Query: 1382 RESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIG 1441
R + + FN S FIFLLS RA G GLNLQ+ADTV+I+D D NP + QA RAHRIG
Sbjct: 1110 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1169
Query: 1442 QKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYK 1501
Q+ EV+V+ + V + E+++ + +YK
Sbjct: 1170 QQNEVRVLRLCTV------NSVEEKILAAA---------------------------KYK 1196
Query: 1502 IDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEV 1561
+++ +VI AG FDQ+++ ERR L+ +L EE +E + +N+MIAR E+E
Sbjct: 1197 LNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEF 1255
Query: 1562 ELFDQMD 1568
+LF +MD
Sbjct: 1256 DLFMRMD 1262
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 23/193 (11%)
Query: 743 PDLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIM----AMPDRQYRKFVRLCERQRVEL 798
PDL + +E K LRLL+ Q +LR EV + A+ + Y++ R R+ +
Sbjct: 375 PDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE-ARM 433
Query: 799 MRQVQTSQKAMREKQ--------LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERIL 850
+++ QK +E++ L SI Q K E H ++ ++ VA +H
Sbjct: 434 TEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTE 493
Query: 851 REFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLY 910
RE K + +RM L D E YR+++ +++ L+ L QT+EY+
Sbjct: 494 REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDR----------RLAYLLQQTDEYVA 543
Query: 911 KLGSKITAAKNQQ 923
L + + K Q
Sbjct: 544 NLTNLVWEHKQAQ 556
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/607 (43%), Positives = 365/607 (60%), Gaps = 66/607 (10%)
Query: 978 YYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVM 1037
YY++AHA++ERV +Q ++L GTL+ YQ+ GL+WM+SLYNN LNGILADEMGLGKT+Q +
Sbjct: 701 YYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTI 760
Query: 1038 ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAA 1097
ALI YLME K GP+LIIVP + L NW E KW PSV I Y G R L Q+ +
Sbjct: 761 ALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRS 820
Query: 1098 LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLLT 1156
KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RR+LLT
Sbjct: 821 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLT 880
Query: 1157 GTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIII 1216
GTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+ ++II
Sbjct: 881 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-----LNEEETILII 935
Query: 1217 HRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEK 1276
RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D ++
Sbjct: 936 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD 995
Query: 1277 RRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF--------------- 1321
++ KTL N M+LRK CNHP + F + + F
Sbjct: 996 KK-------GKGGAKTLMNTIMQLRKICNHPYM----FQHIEESFAEHLGYSNGVINGAE 1044
Query: 1322 LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLED 1381
L ++ GK +LDRIL KL+ T HRVLLF MT L+ I+E+Y +R +Y R+DGTT ED
Sbjct: 1045 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1104
Query: 1382 RESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIG 1441
R + + FN S FIFLLS RA G GLNLQ+ADTV+I+D D NP + QA RAHRIG
Sbjct: 1105 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1164
Query: 1442 QKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYK 1501
Q+ EV+V+ + V + E+++ + +YK
Sbjct: 1165 QQNEVRVLRLCTV------NSVEEKILAAA---------------------------KYK 1191
Query: 1502 IDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEV 1561
+++ +VI AG FDQ+++ ERR L+ +L EE +E + +N+MIAR E+E
Sbjct: 1192 LNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEF 1250
Query: 1562 ELFDQMD 1568
+LF +MD
Sbjct: 1251 DLFMRMD 1257
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 295/793 (37%), Positives = 442/793 (55%), Gaps = 102/793 (12%)
Query: 788 VRLCERQRVELMRQVQTSQKAMREKQLKSISQWRKKLLEAHWAIRDARTARNRGVAKYHE 847
VRL E + + + + ++ + +++ SI + K+ W+ ++ R A H
Sbjct: 301 VRLAEELERQQLLEKRKKERNLHLQKINSIIDFIKERQSEQWSRQERCFQFGRLGASLHN 360
Query: 848 RILREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEE 907
++ ++ KR + +R+ ALK+ND E Y ++L QT + ++ L QT
Sbjct: 361 QMEKDEQKRIERTAKQRLAALKSNDEEAYLKLL--DQT--------KDTRITQLLRQTNS 410
Query: 908 YLYKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAGEEVMIRNRFLEMN 967
+L L + A +N+ ++ +Q +++EE
Sbjct: 411 FLDSLSEAVRAQQNEAKI-------LHGEEVQPITDEE---------------------- 441
Query: 968 APRDGSSVNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADE 1027
R+ + YY +AH + E++ +QPS+L GTL++YQ+ GL+WM+SLYNN LNGILADE
Sbjct: 442 --REKTD---YYEVAHRIKEKIDKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADE 496
Query: 1028 MGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQ 1087
MGLGKT+Q ++LI YL E K + GP L+IVP + + NW E KW PS++ I Y G +Q
Sbjct: 497 MGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQ 556
Query: 1088 RSRLFSQVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDR- 1146
R L Q+ F+VL+TTYE+I+ D+S LSK DW ++IIDE RMK+ +S L+ +
Sbjct: 557 RHSLQHQIRVGNFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHY 616
Query: 1147 YRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDW 1206
YR + RL+LTGTPLQN+L ELW+LLN +LP++F++ K F DWF+ PF G +
Sbjct: 617 YRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLEL-- 674
Query: 1207 LETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATG 1266
E+ ++II RLH++L PF+LRR ++VE LP KV V++C++S +Q +Y +
Sbjct: 675 -TEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHN 733
Query: 1267 TLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDL--------- 1317
L V E K I K LNN+ M+LRK CNHP + F ++
Sbjct: 734 ALFVGAGTEG--ATKGGI------KGLNNKIMQLRKICNHPFV----FDEVEGVVNPSRG 781
Query: 1318 SKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTT 1377
+ D L + GK +LDR+L K + +GHRVL+F MT+++DI+E++L+ + L Y R+DG+T
Sbjct: 782 NSDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGST 841
Query: 1378 SLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARA 1437
E+R + FN+ DSD F FLLS RA G GLNLQ+ADTVII+D D NP + QA RA
Sbjct: 842 KTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRA 901
Query: 1438 HRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNI 1497
HRIGQK EV+++ + T D S+E +I
Sbjct: 902 HRIGQKNEVRILRL-------------------ITTD-------------SVEEVILERA 929
Query: 1498 QQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARS 1557
Q K+D+ +VI AG+FD ++T EE+ L L+ E + E+N +ARS
Sbjct: 930 MQ-KLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDDKAELDDDELNDTLARS 988
Query: 1558 EDEVELFDQMDEE 1570
DE LFD++D+E
Sbjct: 989 ADEKILFDKIDKE 1001
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust.
Identities = 278/677 (41%), Positives = 377/677 (55%), Gaps = 107/677 (15%)
Query: 975 VNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTV 1034
+ YY++AHAV ERV +Q +++ G L+ YQI GL+W++SLYNN LNGILADEMGLGKT+
Sbjct: 728 LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 787
Query: 1035 QVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQ 1094
Q +ALI YLME K GP LIIVP + L NW E KW PSV + Y G+ R Q
Sbjct: 788 QTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ 847
Query: 1095 VAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRL 1153
+ + KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RRL
Sbjct: 848 LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRL 907
Query: 1154 LLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKV 1213
LLTGTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+ +
Sbjct: 908 LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-----LNEEETI 962
Query: 1214 IIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPE 1273
+II RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D
Sbjct: 963 LIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGS 1022
Query: 1274 DEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF------------ 1321
++ ++ KTL N M+LRK CNHP + F + + F
Sbjct: 1023 EKDKK-------GKGGTKTLMNTIMQLRKICNHPYM----FQHIEESFSEHLGFTGGIVQ 1071
Query: 1322 ---LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTS 1378
L ++ GK +LDRIL KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT
Sbjct: 1072 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1131
Query: 1379 LEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAH 1438
EDR + FN S+ FIFLLS RA G GLNLQSADTVII+D D NP + QA RAH
Sbjct: 1132 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1191
Query: 1439 RIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQ 1498
RIGQ+ EV+V+ + V+ + E LA
Sbjct: 1192 RIGQQNEVRVLRL-CTVNSVE----------------EKILAAA---------------- 1218
Query: 1499 QYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVH---------------- 1542
+YK+++ +VI AG FDQ+++ ERR L+ +L EE+ E+ H
Sbjct: 1219 KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQ-DESRHCSTGSGSASFAHTAPP 1277
Query: 1543 -----------------DVPSLQEVNRMIARSEDEVELFDQMDEEFGWIE--------EM 1577
+VP + VN+MIAR E+E +LF +MD + E +
Sbjct: 1278 PAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRL 1337
Query: 1578 TRYDQVPKWLRASTKEV 1594
D++P W+ EV
Sbjct: 1338 MEEDELPSWIIKDDAEV 1354
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 744 DLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVELMR--- 800
DL + IE K LRLL+ Q +LR EV + A+ K + +RQ + R
Sbjct: 395 DLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITE 454
Query: 801 QVQTSQKAMREKQ--------LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERILRE 852
+++ QK +E++ L SI Q K E H ++ + VA YH RE
Sbjct: 455 KLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTERE 514
Query: 853 FSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKL 912
K + +RM L D E YR+++ +++ L+ L QT+EY+ L
Sbjct: 515 QKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK----------RLAYLLQQTDEYVANL 564
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 444 SAIPSSDGSSANNFSSQGGLAT-------QMPQQRLG---FTKHQLHVLKAQILAFRRLK 493
S +P+S SS SS G A + QQ G F ++QLH L+AQI+A++ L
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLA 191
Query: 494 KGEGTLPQELLRAI 507
+G+ LP L A+
Sbjct: 192 RGQ-PLPDHLQMAV 204
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/644 (42%), Positives = 374/644 (58%), Gaps = 74/644 (11%)
Query: 975 VNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTV 1034
+ YY++AHAV ERV +Q +++ G L+ YQI GL+W++SLYNN LNGILADEMGLGKT+
Sbjct: 720 LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 779
Query: 1035 QVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQ 1094
Q +ALI YLME K GP LIIVP + L NW E KW PSV + Y G+ R Q
Sbjct: 780 QTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ 839
Query: 1095 VAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRL 1153
+ + KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RRL
Sbjct: 840 LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRL 899
Query: 1154 LLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKV 1213
LLTGTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+ +
Sbjct: 900 LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-----LNEEETI 954
Query: 1214 IIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPE 1273
+II RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D
Sbjct: 955 LIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGS 1014
Query: 1274 DEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF------------ 1321
++ ++ KTL N M+LRK CNHP + F + + F
Sbjct: 1015 EKDKK-------GKGGTKTLMNTIMQLRKICNHPYM----FQHIEESFSEHLGFTGGIVQ 1063
Query: 1322 ---LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTS 1378
L ++ GK +LDRIL KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT
Sbjct: 1064 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1123
Query: 1379 LEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAH 1438
EDR + FN S+ FIFLLS RA G GLNLQSADTVII+D D NP + QA RAH
Sbjct: 1124 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1183
Query: 1439 RIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQ 1498
RIGQ+ EV+V+ + V + E+++ +
Sbjct: 1184 RIGQQNEVRVLRLCTV------NSVEEKILAAA--------------------------- 1210
Query: 1499 QYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSE 1558
+YK+++ +VI AG FDQ+++ ERR L+ +L EE+ +E + VN+MIAR E
Sbjct: 1211 KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARHE 1269
Query: 1559 DEVELFDQMDEEFGWIE--------EMTRYDQVPKWLRASTKEV 1594
+E +LF +MD + E + D++P W+ EV
Sbjct: 1270 EEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV 1313
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 744 DLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVELMR--- 800
DL + IE K LRLL+ Q +LR EV + A+ K + +RQ + R
Sbjct: 387 DLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITE 446
Query: 801 QVQTSQKAMREKQ--------LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERILRE 852
+++ QK +E++ L SI Q K E H ++ + VA YH RE
Sbjct: 447 KLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTERE 506
Query: 853 FSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKL 912
K + +RM L D E YR+++ +++ L+ L QT+EY+ L
Sbjct: 507 QKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK----------RLAYLLQQTDEYVANL 556
Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 444 SAIPSSDGSSANNFSSQGGLAT-------QMPQQRLG---FTKHQLHVLKAQILAFRRLK 493
S +P+S SS SS G A + QQ G F ++QLH L+AQI+A++ L
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLA 191
Query: 494 KGEGTLPQELLRAI 507
+G+ LP L A+
Sbjct: 192 RGQ-PLPDHLQMAV 204
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 485 bits (1248), Expect = e-135, Method: Compositional matrix adjust.
Identities = 275/644 (42%), Positives = 373/644 (57%), Gaps = 74/644 (11%)
Query: 975 VNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTV 1034
+ YY++AHAV ERV +Q +++ G L+ YQI GL+W++SLYNN LNGILADEMGLGKT+
Sbjct: 728 LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 787
Query: 1035 QVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQ 1094
Q +ALI YLME K GP LIIVP + L NW E KW PSV + Y G+ R Q
Sbjct: 788 QTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ 847
Query: 1095 VAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRL 1153
+ + KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RRL
Sbjct: 848 LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRL 907
Query: 1154 LLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKV 1213
LLTGTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+ +
Sbjct: 908 LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-----LNEEETI 962
Query: 1214 IIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPE 1273
+II RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D
Sbjct: 963 LIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGS 1022
Query: 1274 DEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF------------ 1321
++ ++ KTL N M+LRK CNHP + F + + F
Sbjct: 1023 EKDKK-------GKGGTKTLMNTIMQLRKICNHPYM----FQHIEESFSEHLGFTGGIVQ 1071
Query: 1322 ---LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTS 1378
L ++ GK +LDRIL KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT
Sbjct: 1072 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1131
Query: 1379 LEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAH 1438
EDR + FN S+ FIFLLS RA G GLNLQSADTVII+D D NP + QA RAH
Sbjct: 1132 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1191
Query: 1439 RIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQ 1498
RIGQ+ EV+V+ + V+ + E LA
Sbjct: 1192 RIGQQNEVRVLRL-CTVNSVE----------------EKILAAA---------------- 1218
Query: 1499 QYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSE 1558
+YK+++ +VI AG FDQ+++ ERR L+ +L EE+ +E + VN+MIAR E
Sbjct: 1219 KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARHE 1277
Query: 1559 DEVELFDQMDEEFGWIE--------EMTRYDQVPKWLRASTKEV 1594
+E +LF +MD + E + D++P W+ EV
Sbjct: 1278 EEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV 1321
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 744 DLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVELMR--- 800
DL + IE K LRLL+ Q +LR EV + A+ K + +RQ + R
Sbjct: 395 DLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITE 454
Query: 801 QVQTSQKAMREKQ--------LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERILRE 852
+++ QK +E++ L SI Q K E H ++ + VA YH RE
Sbjct: 455 KLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTERE 514
Query: 853 FSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKL 912
K + +RM L D E YR+++ +++ L+ L QT+EY+ L
Sbjct: 515 QKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK----------RLAYLLQQTDEYVANL 564
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 485 bits (1248), Expect = e-135, Method: Compositional matrix adjust.
Identities = 275/644 (42%), Positives = 373/644 (57%), Gaps = 74/644 (11%)
Query: 975 VNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTV 1034
+ YY++AHAV ERV +Q +++ G L+ YQI GL+W++SLYNN LNGILADEMGLGKT+
Sbjct: 728 LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 787
Query: 1035 QVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQ 1094
Q +ALI YLME K GP LIIVP + L NW E KW PSV + Y G+ R Q
Sbjct: 788 QTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ 847
Query: 1095 VAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRL 1153
+ + KFNVL+TTYE+I+ D+ L+K+ WKY+I+DE RMK+ L + L+ Y RRL
Sbjct: 848 LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRL 907
Query: 1154 LLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKV 1213
LLTGTPLQN L ELW+LLN LLP +F + F WF+ PF G + L E+ +
Sbjct: 908 LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-----LNEEETI 962
Query: 1214 IIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPE 1273
+II RLH++L PF+LRR ++VE LP KV V++C MSA+Q +Y ++A G L D
Sbjct: 963 LIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGS 1022
Query: 1274 DEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF------------ 1321
++ ++ KTL N M+LRK CNHP + F + + F
Sbjct: 1023 EKDKK-------GKGGTKTLMNTIMQLRKICNHPYM----FQHIEESFSEHLGFTGGIVQ 1071
Query: 1322 ---LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTS 1378
L ++ GK +LDRIL KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT
Sbjct: 1072 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1131
Query: 1379 LEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAH 1438
EDR + FN S+ FIFLLS RA G GLNLQSADTVII+D D NP + QA RAH
Sbjct: 1132 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1191
Query: 1439 RIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQ 1498
RIGQ+ EV+V+ + V+ + E LA
Sbjct: 1192 RIGQQNEVRVLRL-CTVNSVE----------------EKILAAA---------------- 1218
Query: 1499 QYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSE 1558
+YK+++ +VI AG FDQ+++ ERR L+ +L EE+ +E + VN+MIAR E
Sbjct: 1219 KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVP-DDETVNQMIARHE 1277
Query: 1559 DEVELFDQMDEEFGWIE--------EMTRYDQVPKWLRASTKEV 1594
+E +LF +MD + E + D++P W+ EV
Sbjct: 1278 EEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV 1321
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 744 DLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMPDRQYRKFVRLCERQRVELMR--- 800
DL + IE K LRLL+ Q +LR EV + A+ K + +RQ + R
Sbjct: 395 DLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITE 454
Query: 801 QVQTSQKAMREKQ--------LKSISQWRKKLLEAHWAIRDARTARNRGVAKYHERILRE 852
+++ QK +E++ L SI Q K E H ++ + VA YH RE
Sbjct: 455 KLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTERE 514
Query: 853 FSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKL 912
K + +RM L D E YR+++ +++ L+ L QT+EY+ L
Sbjct: 515 QKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK----------RLAYLLQQTDEYVANL 564
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 283/751 (37%), Positives = 437/751 (58%), Gaps = 98/751 (13%)
Query: 846 HERILREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQT 905
H + R+ KR + +R++ALK ND E Y ++L + + + ++ L QT
Sbjct: 637 HTNLERDEQKRAEKKAKERLQALKANDEEAYIKLLDQTKDT----------RITHLLRQT 686
Query: 906 EEYLYKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAGEEV----MIRN 961
+L L A K+QQ+ ++E + S A EEV M+
Sbjct: 687 NAFLDSLTR---AVKDQQKY----------------TKEMIDSHIKEASEEVDDLSMVPK 727
Query: 962 RFLEMNAPRDGSSVNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLN 1021
E D +S YY++AH + E + +QPS+L GTL+DYQI GLQWM+SL+NN LN
Sbjct: 728 MKDEEYDDDDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLN 787
Query: 1022 GILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYY 1081
GILADEMGLGKT+Q ++L+ YL E K GP+L+IVP + L NW SE KW P++ I +
Sbjct: 788 GILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISF 847
Query: 1082 VGAKDQRSRLFSQVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLA 1141
G+ ++R +++ A +F+V++TT+E+I+ +R+ LSKV W ++IIDE RMK+ +S L+
Sbjct: 848 KGSPNERKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLS 907
Query: 1142 RDLD-RYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTH 1200
L+ Y RL+LTGTPLQN+L ELW+LLN +LP++F++ K+F +WF+ PF G
Sbjct: 908 LTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTG--- 964
Query: 1201 NADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYD 1260
D L E+ +++I RLH++L PF+LRR +DVE LP KV V++C+MSA+Q +Y
Sbjct: 965 GQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQ 1024
Query: 1261 WIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDL--- 1317
+ L + ++ K+ V + NN+ M+L+K CNHP + F ++
Sbjct: 1025 QMLKYRRLFIGDQNNKKMVG---------LRGFNNQIMQLKKICNHPFV----FEEVEDQ 1071
Query: 1318 ------SKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYR 1371
+ D + + GK +LDRIL KL+ TGHRVL+F MT+++DI+E++L++ + Y
Sbjct: 1072 INPTRETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYL 1131
Query: 1372 RIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEE 1431
R+DG T ++R + FN+ DS+ F+LS RA G GLNLQ+ADTVII+D D NP +
Sbjct: 1132 RLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDL 1191
Query: 1432 QAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEG 1491
QA RAHRIGQK EV+++ + I+++ S+E
Sbjct: 1192 QAQDRAHRIGQKNEVRILRL------ITTN--------------------------SVEE 1219
Query: 1492 LIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEE----RYQETVHDVPSL 1547
+I + K+D+ +VI AG+FD ++T EE+ L +LL EE + + V + L
Sbjct: 1220 VILERAYK-KLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESGVEEEEEL 1278
Query: 1548 Q--EVNRMIARSEDEVELFDQMDEEFGWIEE 1576
+ E+N ++AR+++E+ + +MDE+ EE
Sbjct: 1279 KDSEINEILARNDEEMAVLTRMDEDRSKKEE 1309
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/535 (40%), Positives = 312/535 (58%), Gaps = 46/535 (8%)
Query: 993 PSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGP 1052
P+ +++G +RDYQI GL WM+SLY N +NGILADEMGLGKT+Q ++L+ YL FK GP
Sbjct: 120 PAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGP 179
Query: 1053 HLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAA-LKFNVLVTTYEFIM 1111
H++IVP + L NW +E KW PS+ + +G +D R+ V +++V VT+YE +
Sbjct: 180 HIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCI 239
Query: 1112 YDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLL 1171
++S K +W+Y++IDEA R+K+ +S L+ L ++ RLL+TGTPLQN+L ELW+LL
Sbjct: 240 REKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALL 299
Query: 1172 NLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRR 1231
N LLP+VF++ + F +WF+ T DD +I RLH +L+PF+LRR
Sbjct: 300 NFLLPDVFNSSEDFDEWFNTN------TCLGDD---------ALITRLHAVLKPFLLRRL 344
Query: 1232 VEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYK 1291
+VE L PK + + +S +Q DW +D + +V+K
Sbjct: 345 KAEVEKRLKPKKEMKIFVGLSKMQR---DWYTKVLLKDIDVVNGAGKVEK---------M 392
Query: 1292 TLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHR 1345
L N M+LRK NHP L PY +D LV + GK+ ILD++L KLQ G R
Sbjct: 393 RLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH---LVYNSGKMAILDKLLPKLQEQGSR 449
Query: 1346 VLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRA 1405
VL+FS MT++LDILE+Y WR Y R+DG T EDR I +FN +S F+F+LS RA
Sbjct: 450 VLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRA 509
Query: 1406 AGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM--EAVVDKISSHQK 1463
G G+NL +AD VIIYD D NP+ + QA+ RAHRIGQK++V+V + E+ V++ +
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 1464 EDELR-------SGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINA 1511
E +LR G VD + KD + I + D+ DE I+
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDV 624
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/466 (44%), Positives = 290/466 (62%), Gaps = 41/466 (8%)
Query: 993 PSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGP 1052
PS ++ G LRDYQI GL W++SLY N +NGILADEMGLGKT+Q +AL+ YL ++ GP
Sbjct: 179 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 238
Query: 1053 HLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLF-SQVAALKFNVLVTTYEFIM 1111
H+++VP + L NW +E +W+PS+ I +VG KD R+ ++ +++V VT+YE ++
Sbjct: 239 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVI 298
Query: 1112 YDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLL 1171
++S K W+Y++IDEA R+K+ +S L+ + ++ RLLLTGTPLQN+L ELW+LL
Sbjct: 299 KEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALL 358
Query: 1172 NLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRR 1231
N LLP+VF++ F WF T N D +K ++ RLH +L+PF+LRR
Sbjct: 359 NFLLPDVFNSADDFDSWFD--------TKNCLGD----QK---LVERLHAVLKPFLLRRI 403
Query: 1232 VEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEKRRVQKNPIYQAKV 1289
DVE SLPPK I + +S +Q Y I K L + +K R
Sbjct: 404 KTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMR----------- 452
Query: 1290 YKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTG 1343
L N M+LRK CNHP L PY +D + +V + GK+ LD++L +++ G
Sbjct: 453 ---LLNILMQLRKCCNHPYLFDGAEPGPPYTTD---EHIVGNSGKMVALDKLLARIKEQG 506
Query: 1344 HRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSI 1403
RVL+FS MT+LLDILE+Y WR Y R+DG T E+RE AI FN+ +S FIF+LS
Sbjct: 507 SRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLST 566
Query: 1404 RAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1449
RA G G+NL SAD VI+YD D NP+ + QA+ RAHRIGQK+ V+V
Sbjct: 567 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVF 612
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1 SV=1
Length = 1120
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/468 (43%), Positives = 299/468 (63%), Gaps = 36/468 (7%)
Query: 989 VMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 1048
V PS +++G LRDYQ+ GL W++SL+ NKL+GILADEMGLGKT+Q ++ + YL K
Sbjct: 172 VSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQ 231
Query: 1049 NYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAA-LKFNVLVTTY 1107
GP LIIVP + L NW+ E KW P+V+ + G KD R+ + + +F+VL+T+Y
Sbjct: 232 IEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSY 291
Query: 1108 EFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKEL 1167
E ++ +++ L ++ W+YI+IDEA R+K+ +S L++ + + + RLL+TGTPLQN+L EL
Sbjct: 292 EMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHEL 351
Query: 1168 WSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFM 1227
W+LLN LLP++F + + F +WF Q +N++ D + I+I +LH +L PF+
Sbjct: 352 WALLNFLLPDIFGDSELFDEWFEQ--------NNSEQD------QEIVIQQLHSVLNPFL 397
Query: 1228 LRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQA 1287
LRR DVE SL PK+ + M+ +Q W K+ +D N
Sbjct: 398 LRRVKADVEKSLLPKIETNVYVGMTDMQ---IQWYKSLLEKDIDA--------VNGAVGK 446
Query: 1288 KVYKT-LNNRCMELRKTCNHPLLNY------PYFSDLSKDFLVKSCGKLWILDRILIKLQ 1340
+ KT L N M+LRK CNHP L PY +D + L+ + GK+ ILD++L +L+
Sbjct: 447 REGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD---EHLIFNSGKMIILDKLLKRLK 503
Query: 1341 RTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFL 1400
G RVL+FS M++LLDILE+Y +R Y RIDG+TS E+R AI ++N +S+ F+FL
Sbjct: 504 EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFL 563
Query: 1401 LSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1448
L+ RA G G+NL +ADTVI++D D NP+ + QA+ RAHRIGQK++V V
Sbjct: 564 LTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHV 611
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/492 (40%), Positives = 299/492 (60%), Gaps = 39/492 (7%)
Query: 991 RQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY 1050
+ P + G +RDYQ+ GL W+ SL +NK+NGILADEMGLGKT+Q +++I Y+ +K
Sbjct: 122 KSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKA 181
Query: 1051 GPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAA-LKFNVLVTTYEF 1109
PHL+IVP + L NW +E KW PS++ + +G + R+++ V KF+V TTYE
Sbjct: 182 SPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEM 241
Query: 1110 IMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWS 1169
++ +++L K++W+YIIIDEA R+K+ +S L+ + + RLL+TGTPLQN+L ELW+
Sbjct: 242 MLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWA 301
Query: 1170 LLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLR 1229
LLN LLP++F + F WFS + + N D ++ RLH++L+PF+LR
Sbjct: 302 LLNFLLPDIFTSSDDFDSWFSN----DAMSGNTD-----------LVQRLHKVLQPFLLR 346
Query: 1230 RRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKV 1289
R DVE SL PK + + +S +Q +W +D + +V+K
Sbjct: 347 RIKSDVEKSLLPKKEVKVYVGLSKMQR---EWYTKVLMKDIDIINGAGKVEK-------- 395
Query: 1290 YKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTG 1343
L N M LRK NHP L P+ +D LV + GK+ +LD++L+K + G
Sbjct: 396 -ARLMNILMHLRKCVNHPYLFDGAEPGPPFTTD---QHLVDNSGKMVVLDKLLMKFKEQG 451
Query: 1344 HRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSI 1403
RVL+FS +++LD+LE++ WR Y R+DG+T EDR +AI +N+ DS FIF+L+
Sbjct: 452 SRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTT 511
Query: 1404 RAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM--EAVVDKISSH 1461
RA G G+NL +AD VIIYD D NP+++ QA+ RAHRIGQK++V+V + E VD+
Sbjct: 512 RAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIE 571
Query: 1462 QKEDELRSGGTV 1473
+ E +LR V
Sbjct: 572 KAEAKLRLDNIV 583
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/478 (43%), Positives = 291/478 (60%), Gaps = 53/478 (11%)
Query: 993 PSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGP 1052
PS ++ G LRDYQI GL W++SLY N +NGILADEMGLGKT+Q +AL+ YL ++ GP
Sbjct: 175 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 234
Query: 1053 HLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLF-SQVAALKFNVLVTTYEFIM 1111
H+++VP + L NW +E +W+PS+ I +VG KD R+ ++ +++V VT+YE ++
Sbjct: 235 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVI 294
Query: 1112 YDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLL 1171
++S K W+Y++IDEA R+K+ +S L+ + ++ RLLLTGTPLQN+L ELW+LL
Sbjct: 295 KEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALL 354
Query: 1172 NLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRR 1231
N LLP+VF++ F WF T N D +K ++ RLH +L+PF+LRR
Sbjct: 355 NFLLPDVFNSADDFDSWFD--------TKNCLGD----QK---LVERLHAVLKPFLLRRI 399
Query: 1232 VEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEKRRVQKNPIYQAKV 1289
DVE SLPPK I + +S +Q Y I K L + +K R
Sbjct: 400 KTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMR----------- 448
Query: 1290 YKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTG 1343
L N M+LRK CNHP L PY +D + +V + GK+ +LD++L KL+ G
Sbjct: 449 ---LLNILMQLRKCCNHPYLFDGAEPGPPYTTD---EHIVSNSGKMVVLDKLLAKLKEQG 502
Query: 1344 HRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRE------------SAIVDFNS 1391
RVL+FS MT+LLDILE+Y WR Y R+DG T E+RE AI FN+
Sbjct: 503 SRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNA 562
Query: 1392 HDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1449
+S FIF+LS RA G G+NL SAD VI+YD D NP+ + QA+ RAHRIGQK+ V+V
Sbjct: 563 PNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVF 620
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus GN=Smarca5
PE=1 SV=1
Length = 1051
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/528 (40%), Positives = 311/528 (58%), Gaps = 50/528 (9%)
Query: 980 SLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMAL 1039
S A V R PS ++ G LRDYQ+ GL W++SLY N +NGILADEMGLGKT+Q ++L
Sbjct: 158 SKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL 217
Query: 1040 IAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAAL- 1098
+ Y+ ++ GPH+++VP + L NW SE KW+P++ + +G K+QR+ V
Sbjct: 218 LGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPG 277
Query: 1099 KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGT 1158
+++V VT+YE ++ ++S K +W+Y++IDEA R+K+ +S L+ + ++ RLLLTGT
Sbjct: 278 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 337
Query: 1159 PLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHR 1218
PLQN+L ELWSLLN LLP+VF++ F WF T+N L +K ++ R
Sbjct: 338 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFD--------TNNC----LGDQK---LVER 382
Query: 1219 LHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEK 1276
LH +L PF+LRR DVE SLPPK + + +S +Q Y I K L + +K
Sbjct: 383 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 442
Query: 1277 RRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLW 1330
R L N M+LRK CNHP L PY +D+ LV + GK+
Sbjct: 443 MR--------------LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH---LVTNSGKMV 485
Query: 1331 ILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFN 1390
+LD++L KL+ G RVL+FS MT++LDILE+Y WR Y R+DG T ++R+ +I +N
Sbjct: 486 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 545
Query: 1391 SHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIY 1450
+S F+F+LS RA G G+NL +AD VI+YD D NP+ + QA+ RAHRIGQ + V+V
Sbjct: 546 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 605
Query: 1451 M-------EAVVDKISSHQKEDE--LRSGGTVDLEDDLAGKDRYIGSI 1489
E +V++ + D ++ G VD + GKD + I
Sbjct: 606 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 653
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5
PE=1 SV=1
Length = 1052
Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/528 (40%), Positives = 311/528 (58%), Gaps = 50/528 (9%)
Query: 980 SLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMAL 1039
S A V R PS ++ G LRDYQ+ GL W++SLY N +NGILADEMGLGKT+Q ++L
Sbjct: 159 SKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL 218
Query: 1040 IAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAAL- 1098
+ Y+ ++ GPH+++VP + L NW SE +W+P++ + +G K+QR+ V
Sbjct: 219 LGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPG 278
Query: 1099 KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGT 1158
+++V VT+YE ++ ++S K +W+Y++IDEA R+K+ +S L+ + ++ RLLLTGT
Sbjct: 279 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 338
Query: 1159 PLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHR 1218
PLQN+L ELWSLLN LLP+VF++ F WF T+N D +K ++ R
Sbjct: 339 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFD--------TNNCLGD----QK---LVER 383
Query: 1219 LHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEK 1276
LH +L PF+LRR DVE SLPPK + + +S +Q Y I K L + +K
Sbjct: 384 LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDK 443
Query: 1277 RRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLW 1330
R L N M+LRK CNHP L PY +D+ LV + GK+
Sbjct: 444 MR--------------LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH---LVTNSGKMV 486
Query: 1331 ILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFN 1390
+LD++L KL+ G RVL+FS MT++LDILE+Y WR Y R+DG T ++R+ +I +N
Sbjct: 487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 546
Query: 1391 SHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIY 1450
+S F+F+LS RA G G+NL +AD VI+YD D NP+ + QA+ RAHRIGQ + V+V
Sbjct: 547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 1451 M-------EAVVDKISSHQKEDE--LRSGGTVDLEDDLAGKDRYIGSI 1489
E +V++ + D ++ G VD + GKD + I
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMI 654
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/477 (42%), Positives = 296/477 (62%), Gaps = 40/477 (8%)
Query: 980 SLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMAL 1039
+LA + R++ QPS ++ G +RDYQ+ GL W++ LY N +NGILADEMGLGKT+Q ++L
Sbjct: 211 ALAGSGGTRLLSQPSCIK-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISL 269
Query: 1040 IAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAA-L 1098
+ YL EF+G GPH+++ P + L NW E+ ++ P + + ++G ++R+ + +
Sbjct: 270 LGYLHEFRGITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPG 329
Query: 1099 KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGT 1158
KF+V VT++E + +++ L + W+YIIIDEA R+K+ S+L++ + Y RLL+TGT
Sbjct: 330 KFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 389
Query: 1159 PLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHR 1218
PLQN+L ELWSLLN LLPE+F + + F +WF Q G + ++ +
Sbjct: 390 PLQNNLHELWSLLNFLLPEIFSSAETFDEWF----QISGENDQQE-----------VVQQ 434
Query: 1219 LHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRR 1278
LH++L PF+LRR DVE LPPK +L+ MS +Q Y + ++ E++R
Sbjct: 435 LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKR 494
Query: 1279 VQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNY------PYFSDLSKDFLVKSCGKLWIL 1332
L N M+LRK CNHP L PY + + LV++ GK+ +L
Sbjct: 495 --------------LLNIAMQLRKCCNHPYLFQGAEPGPPY---TTGEHLVENAGKMVLL 537
Query: 1333 DRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSH 1392
D++L KL+ RVL+FS MT+LLDILE+YL +R Y RIDG T EDR+++I FN
Sbjct: 538 DKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKP 597
Query: 1393 DSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1449
S+ F+FLLS RA G G+NL +AD V++YD D NP+ + QA RAHRIGQK+EV+V
Sbjct: 598 GSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVF 654
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/476 (41%), Positives = 297/476 (62%), Gaps = 40/476 (8%)
Query: 981 LAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALI 1040
L + N R++ QPS ++ G +RDYQ+ GL W++ LY N +NGILADEMGLGKT+Q ++L+
Sbjct: 170 LTGSGNTRLLTQPSCIQ-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 228
Query: 1041 AYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQV-AALK 1099
AYL E++G GPH+++ P + L NW +E+ ++ P + + ++G ++R + + A K
Sbjct: 229 AYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGK 288
Query: 1100 FNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTP 1159
F++ VT++E + +++ L + W+YIIIDEA R+K+ S+L++ + + RLL+TGTP
Sbjct: 289 FDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 348
Query: 1160 LQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRL 1219
LQN+L ELW+LLN LLPE+F + + F +WF Q G + ++ +L
Sbjct: 349 LQNNLHELWALLNFLLPEIFSSAETFDEWF----QISGENDQQE-----------VVQQL 393
Query: 1220 HQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRV 1279
H++L PF+LRR DVE LPPK +L+ MS +Q Y + V+ E++R
Sbjct: 394 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKR- 452
Query: 1280 QKNPIYQAKVYKTLNNRCMELRKTCNHPLLNY------PYFSDLSKDFLVKSCGKLWILD 1333
L N M+LRK CNHP L PY + D L+ + GK+ +LD
Sbjct: 453 -------------LLNIAMQLRKCCNHPYLFQGAEPGPPY---TTGDHLITNAGKMVLLD 496
Query: 1334 RILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHD 1393
++L KL+ RVL+FS MT+LLDILE+YL +R +Y RIDG T ++R+++I +N
Sbjct: 497 KLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPG 556
Query: 1394 SDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1449
S+ F+FLLS RA G G+NL +AD VI+YD D NP+ + QA RAHRIGQK+EV+V
Sbjct: 557 SEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 612
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1 SV=2
Length = 1129
Score = 360 bits (924), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 206/459 (44%), Positives = 288/459 (62%), Gaps = 36/459 (7%)
Query: 999 GTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVP 1058
G LR YQI G+ W++SL+ NK+ GILADEMGLGKT+Q ++ + YL + GP L+I P
Sbjct: 194 GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAP 253
Query: 1059 NAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLF-SQVAALKFNVLVTTYEFIMYDRSKL 1117
+ L NW E+++W P V+ G K++R+ L ++ F+V++ +YE I+ ++S L
Sbjct: 254 KSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPL 313
Query: 1118 SKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPE 1177
K++W+YIIIDEA R+K+ ES+L++ L + + RLL+TGTPLQN+L ELW+LLN LLP+
Sbjct: 314 KKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPD 373
Query: 1178 VFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 1237
+F + + F DWFS E + D I+ +LH +L+PF+LRR DVE
Sbjct: 374 IFSDAQDFDDWFSS----ESTEEDQDK----------IVKQLHTVLQPFLLRRIKSDVET 419
Query: 1238 SLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKT-LNNR 1296
SL PK + L MS++Q Y I EK N +K KT L N
Sbjct: 420 SLLPKKELNLYVGMSSMQKKWYKKIL-----------EKDLDAVNGSNGSKESKTRLLNI 468
Query: 1297 CMELRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFS 1350
M+LRK CNHP L PY +D + LV + KL +LD++L KL+ G RVL+FS
Sbjct: 469 MMQLRKCCNHPYLFDGAEPGPPYTTD---EHLVYNAAKLQVLDKLLKKLKEEGSRVLIFS 525
Query: 1351 TMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGL 1410
M++LLDILE+Y +R Y RIDG+T+ EDR AI D+N+ DS F+FLL+ RA G G+
Sbjct: 526 QMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGI 585
Query: 1411 NLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1449
NL SAD V++YD D NP+ + QA+ RAHRIGQK++VKV
Sbjct: 586 NLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVF 624
>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1
Length = 838
Score = 357 bits (915), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 212/560 (37%), Positives = 307/560 (54%), Gaps = 69/560 (12%)
Query: 990 MRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGN 1049
+QP G +R YQ+ G++W+ L+ N +NGILADEMGLGKTVQ +A IA +++ +G
Sbjct: 212 FQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ-RGV 270
Query: 1050 YGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAALKFN-----VLV 1104
GP L+ P + L NW +E ++ P + + Y G +++R +L + K V++
Sbjct: 271 PGPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVI 330
Query: 1105 TTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDL 1164
T++E M DR+ L WKY+I+DE R+K+ + L R+L R+ +LLLTGTPLQN+L
Sbjct: 331 TSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNL 390
Query: 1165 KELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILE 1224
ELWSLLN LLP+VFD+ K+F WF E +D + E++ ++H LHQIL
Sbjct: 391 SELWSLLNFLLPDVFDDLKSFESWFDITSLSE-----TAEDIIAKEREQNVLHMLHQILT 445
Query: 1225 PFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI---------------------- 1262
PF+LRR DV +PPK +V+ +S Q Y I
Sbjct: 446 PFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPT 505
Query: 1263 --------KATGTLRVD--------------PEDEKRR--VQKNPIYQAKVYKTLNNRCM 1298
K+ ++D PE ++ R V+ N +++V L N M
Sbjct: 506 GRPKRRTRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMM 565
Query: 1299 ELRKTCNHP-LLNYPYFSDLSKDF-----LVKSCGKLWILDRILIKLQRTGHRVLLFSTM 1352
LRK CNHP L+ YP ++++F LV + GK ILDR+L +L++ GH+VLLFS M
Sbjct: 566 LLRKCCNHPYLIEYP-IDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQM 624
Query: 1353 TKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNL 1412
T +LDIL +Y R + R+DG+ S +RE + FN+ D + FIFL+S RA G G+NL
Sbjct: 625 TSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLGINL 683
Query: 1413 QSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGT 1472
+ADTVIIYD D NP+++ QA R HRIGQ + V V+Y + I E R+
Sbjct: 684 TAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPV-VVYRLVTANTIDQKIVE---RAAAK 739
Query: 1473 VDLEDDLAGKDRYIGSIEGL 1492
LE + K+ + G GL
Sbjct: 740 RKLEKLIIHKNHFKGGQSGL 759
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 357 bits (915), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 192/478 (40%), Positives = 274/478 (57%), Gaps = 45/478 (9%)
Query: 988 RVMRQPSMLRAG-TLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEF 1046
R+ QP L +G TLRDYQ+ GL W+L + + + ILADEMGLGKT+Q + + L +
Sbjct: 514 RIKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKI 573
Query: 1047 KGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL------FSQVAALKF 1100
YGP L +VP + + W+ E W P ++ + Y+G R + F LKF
Sbjct: 574 HHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKF 633
Query: 1101 NVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPL 1160
N ++TTYE ++ D+ L + W +++DEA R+K+ +S+L + L + RLL+TGTPL
Sbjct: 634 NCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPL 693
Query: 1161 QNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLH 1220
QN LKELW+LL+ ++P+ FD + F E NA+D RLH
Sbjct: 694 QNSLKELWALLHFIMPDKFDTWENF----------EVQHGNAEDKGYT---------RLH 734
Query: 1221 QILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQ 1280
Q LEP++LRR +DVE SLP KV +LR M+++Q Y WI D R+ +
Sbjct: 735 QQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNF------DALRKGK 788
Query: 1281 KNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDL-------SKDFLVKSCGKLWILD 1333
+ T N +EL+K CNH L P +L + L+K GKL +LD
Sbjct: 789 RGST------STFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLD 842
Query: 1334 RILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHD 1393
++L +L+ TGHRVL+FS M ++LD+L +YLQ R ++R+DG+ E R A+ FN+
Sbjct: 843 KLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEG 902
Query: 1394 SDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 1451
S F FLLS RA G G+NL +ADTVII+D D NP+N+ QA ARAHRIGQK +V + +
Sbjct: 903 SQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRL 960
>sp|Q60848|HELLS_MOUSE Lymphocyte-specific helicase OS=Mus musculus GN=Hells PE=1 SV=2
Length = 821
Score = 355 bits (912), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 307/560 (54%), Gaps = 69/560 (12%)
Query: 990 MRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGN 1049
+QP G +R YQ+ G++W+ L+ N +NGILADEMGLGKTVQ +A IA +++ +G
Sbjct: 195 FQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ-RGV 253
Query: 1050 YGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQV----AALKFN-VLV 1104
GP L+ P + L NW +E ++ P + + Y G ++ R +L + L+ + V+V
Sbjct: 254 PGPFLVCGPLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHPVVV 313
Query: 1105 TTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDL 1164
T++E M D++ L WKY+I+DE R+K+ + L R+L R+ +LLLTGTPLQN+L
Sbjct: 314 TSFEIAMRDQNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNL 373
Query: 1165 KELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILE 1224
ELWSLLN LLP+VFD+ K+F WF E +D + E++ ++H LHQIL
Sbjct: 374 SELWSLLNFLLPDVFDDLKSFESWFDITSLSE-----TAEDIIAKEREQNVLHMLHQILT 428
Query: 1225 PFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI-------------KATGTL--- 1268
PF+LRR DV +PPK +V+ + Q Y I K T L
Sbjct: 429 PFLLRRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVELSPT 488
Query: 1269 ----------------------------RVDPEDEKRR--VQKNPIYQAKVYKTLNNRCM 1298
++ PE + R V+ N +++V L N M
Sbjct: 489 GRPKRRSRKSINYSELDQFPSELEKLISQIQPEVNRERTVVEGNIPIESEVNLKLRNIMM 548
Query: 1299 ELRKTCNHP-LLNYPYFSDLSKDF-----LVKSCGKLWILDRILIKLQRTGHRVLLFSTM 1352
LRK CNHP ++ YP ++++F LV + GK ILDR+L +L++ GH+VL+FS M
Sbjct: 549 LLRKCCNHPYMIEYP-IDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQM 607
Query: 1353 TKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNL 1412
T +LDIL +Y R ++ R+DG+ S +RE I FN+ D D F+FL+S RA G G+NL
Sbjct: 608 TSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNT-DPDVFLFLVSTRAGGLGINL 666
Query: 1413 QSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGT 1472
+ADTVIIYD D NP+++ QA R HRIGQ + V V+Y + I E R+
Sbjct: 667 TAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPV-VVYRLVTANTIDQKIVE---RAAAK 722
Query: 1473 VDLEDDLAGKDRYIGSIEGL 1492
LE + K+ + G GL
Sbjct: 723 RKLEKLIIHKNHFKGGQSGL 742
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 352 bits (904), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/485 (39%), Positives = 283/485 (58%), Gaps = 61/485 (12%)
Query: 989 VMRQPSMLRAGTL--RDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEF 1046
+ +QP+ L L RDYQ+ GL W+ + + ILADEMGLGKT+Q ++ ++YL
Sbjct: 470 LKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQ 529
Query: 1047 KGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSR--------LFSQVAAL 1098
YGP LI+VP + L +W+ E W P ++ + Y+G D SR + SQ L
Sbjct: 530 HQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIG--DLMSRNTIREYEWIHSQTKRL 587
Query: 1099 KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGT 1158
KFN L+TTYE ++ D++ L ++W ++ +DEA R+K+ +S+L + L ++ RLL+TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647
Query: 1159 PLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHR 1218
PLQN LKELWSLL+ ++PE F+ F + F+++ +
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFE--------FWEDFEEDHGKGRENG-----------YQS 688
Query: 1219 LHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRR 1278
LH++LEPF+LRR +DVE SLP KV +LR MSA+Q Y WI
Sbjct: 689 LHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWI---------------- 732
Query: 1279 VQKNPIYQAKVYKT------LNNRCMELRKTCNHPLLNYPYFSDLSKD------FLVKSC 1326
+ +N Y+A T N MEL+K CNH L P + ++ L++S
Sbjct: 733 LTRN--YKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSS 790
Query: 1327 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAI 1386
GKL +LD++L +L+ G+RVL+FS M ++LDIL EYL + ++R+DG+ E R+ A+
Sbjct: 791 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 850
Query: 1387 VDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREV 1446
FN+ S+ F FLLS RA G G+NL SADTV+I+D D NP+N+ QA ARAHRIGQK++V
Sbjct: 851 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 910
Query: 1447 KVIYM 1451
+ +
Sbjct: 911 NIYRL 915
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/493 (39%), Positives = 287/493 (58%), Gaps = 69/493 (13%)
Query: 987 ERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEF 1046
E++ QP ++ G LRD+Q+ G+ WM L++ NGILADEMGLGKTVQ +A I++L+
Sbjct: 362 EKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFA 421
Query: 1047 KGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSR-------LFSQVAA-- 1097
+ GPH+I+VP + + W KW P ++CI Y+G +Q+SR ++ A
Sbjct: 422 RRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMG--NQKSRDTIREYEFYTNPRAKG 479
Query: 1098 ---LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLL 1154
+KFNVL+TTYE+I+ DR++L + W+++ +DEA R+K+ ES L L+ ++ R+L
Sbjct: 480 KKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRML 539
Query: 1155 LTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVI 1214
+TGTPLQN++KEL +L+N L+P F +E N D++ E
Sbjct: 540 ITGTPLQNNIKELAALVNFLMPGRF------------TIDQEIDFENQDEEQEE------ 581
Query: 1215 IIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPED 1274
IH LH+ ++PF+LRR +DVE SLP K +LR +S +Q+ Y
Sbjct: 582 YIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYY--------------- 626
Query: 1275 EKRRVQKNPIYQAKV------YKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF------- 1321
K + KN Y A + +L N EL+K NHP L + + F
Sbjct: 627 -KNILTKN--YSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTR 683
Query: 1322 ------LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDG 1375
L+ S GK+ +LD++L +L++ GHRVL+FS M ++LDIL +YL + + ++R+DG
Sbjct: 684 ENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDG 743
Query: 1376 TTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVA 1435
T R +I FNS DS+ F+FLLS RA G G+NL +ADTV+I+D D NP+ + QA+A
Sbjct: 744 TVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMA 803
Query: 1436 RAHRIGQKREVKV 1448
RAHRIGQK V V
Sbjct: 804 RAHRIGQKNHVMV 816
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 342 bits (877), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/486 (40%), Positives = 284/486 (58%), Gaps = 62/486 (12%)
Query: 988 RVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFK 1047
++ +QPS ++ G +RD+Q+ G+ WM L++ NGILADEMGLGKTVQ + ++YL+
Sbjct: 377 KLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSL 436
Query: 1048 GNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSR-------LFSQVAALKF 1100
+GP LI+VP + + W+ L W P ++ I Y G + R+ L + LKF
Sbjct: 437 KQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKF 496
Query: 1101 NVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPL 1160
N+L+TTYE+I+ D+ +L+ + W+Y+ IDEA R+K+ ES L L ++R RLL+TGTPL
Sbjct: 497 NILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPL 556
Query: 1161 QNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLH 1220
QN+LKEL SL+N L+P F R + F QP NA E E+ I L
Sbjct: 557 QNNLKELASLVNFLMPGKFYIRDELN--FDQP--------NA-----EQERD---IRDLQ 598
Query: 1221 QILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQ 1280
+ L+PF+LRR +DVE SLP K +LR +S +Q+ Y K +
Sbjct: 599 ERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWY----------------KNILT 642
Query: 1281 KNPIYQAKVYKT-------LNNRCMELRKTCNHPLLNYPYFSD--------LSKDFL--- 1322
KN Y+A T L N +EL+K NHP L +P ++ +D L
Sbjct: 643 KN--YRALTGHTDGRGQLSLLNIVVELKKVSNHPYL-FPGAAEKWMMGRKMTREDTLRGI 699
Query: 1323 VKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDR 1382
+ + GK+ +LD++L +L+ GHRVL+FS M ++L+IL EY+ R Y+R+DGT R
Sbjct: 700 IMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVR 759
Query: 1383 ESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQ 1442
+I FN+ DS F+FLLS RA G G+NL +ADTVII+D D NP+ + QA+ARAHRIGQ
Sbjct: 760 RVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQ 819
Query: 1443 KREVKV 1448
K V V
Sbjct: 820 KNHVNV 825
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus GN=CHD1
PE=1 SV=1
Length = 1719
Score = 335 bits (860), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 225/621 (36%), Positives = 336/621 (54%), Gaps = 93/621 (14%)
Query: 863 KRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKLGSKITAAKNQ 922
K+++ K D E R + + + P D Y LT Y++ +I A NQ
Sbjct: 343 KKLDNYKKKDQETKRWL----KNASPEDV--EYYNCQQELTDDLHKQYQIVERIIAHSNQ 396
Query: 923 QEVEEAANAAAAAARLQGLSEEEVRSAAACAGEE-VMIRNRF---LEMNAPRDGSSVNKY 978
+ AA + QGL E C+ E+ +I +F ++ R+ S +
Sbjct: 397 KS---AAGYPDYYCKWQGLPYSE------CSWEDGALIAKKFQARIDEYFSRNQSKTTPF 447
Query: 979 YSLAHAVNER-----VMRQPSML---RAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGL 1030
+ +R + +QPS + + LRDYQ+ GL W+ + + ILADEMGL
Sbjct: 448 KDCK-VLKQRPRFVALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGL 506
Query: 1031 GKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSR 1090
GKT+Q ++ + YL YGP L++VP + L +W+ E+ W P ++ + Y+G R+
Sbjct: 507 GKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNM 566
Query: 1091 LFS------QVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDL 1144
+ + Q LKFN+L+TTYE ++ D+S L ++W +I +DEA R+K+ +S+L + L
Sbjct: 567 IRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTL 626
Query: 1145 DRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADD 1204
++ RLL+TGTPLQN LKELWSLL+ ++PE F + W + F++E H
Sbjct: 627 IDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSS------W--EDFEEE---HGKGR 675
Query: 1205 DWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKA 1264
++ LH+ LEPF+LRR +DVE SLP KV +LR MSA+Q Y WI
Sbjct: 676 EYGYAS--------LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWI-- 725
Query: 1265 TGTLRVDPEDEKRRVQKNPIYQAKVYKTLN-----------NRCMELRKTCNHPLLNYP- 1312
+ +N YK L+ N MEL+K CNH L P
Sbjct: 726 --------------LTRN-------YKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPP 764
Query: 1313 -----YFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQ 1367
Y + L++S GKL +LD++LI+L+ G+RVL+FS M ++LDIL EYL++RQ
Sbjct: 765 DDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQ 824
Query: 1368 LVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNP 1427
++R+DG+ E R+ A+ FN+ S+ F FLLS RA G G+NL SADTV+I+D D NP
Sbjct: 825 FPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 884
Query: 1428 KNEEQAVARAHRIGQKREVKV 1448
+N+ QA ARAHRIGQK++V +
Sbjct: 885 QNDLQAQARAHRIGQKKQVNI 905
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 332 bits (850), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 223/624 (35%), Positives = 336/624 (53%), Gaps = 93/624 (14%)
Query: 863 KRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKLGSKITAAKNQ 922
K+++ K D E R + + + P D Y LT Y++ +I A NQ
Sbjct: 345 KKLDNYKKKDQETKRWL----KNASPEDV--EYYNCQQELTDDLHKQYQIVERIIAHSNQ 398
Query: 923 QEVEEAANAAAAAARLQGLSEEEVRSAAACAGEE-VMIRNRF---LEMNAPRDGSSVNKY 978
+ AA + QGL E C+ E+ +I +F ++ R+ S +
Sbjct: 399 KS---AAGLPDYYCKWQGLPYSE------CSWEDGALISKKFQTCIDEYFSRNQSKTTPF 449
Query: 979 YSLAHAVNER-----VMRQPSML---RAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGL 1030
+ +R + +QPS + LRDYQ+ GL W+ + + ILADEMGL
Sbjct: 450 KDCK-VLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGL 508
Query: 1031 GKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSR 1090
GKT+Q ++ + YL YGP L++VP + L +W+ E+ W ++ + Y+G + R+
Sbjct: 509 GKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNM 568
Query: 1091 LFS------QVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDL 1144
+ + Q LKFN+L+TTYE ++ D++ L ++W +I +DEA R+K+ +S+L + L
Sbjct: 569 IRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTL 628
Query: 1145 DRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADD 1204
++ RLL+TGTPLQN LKELWSLL+ ++PE F + W + F++E H
Sbjct: 629 IDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSS------W--EDFEEE---HGKGR 677
Query: 1205 DWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKA 1264
++ LH+ LEPF+LRR +DVE SLP KV +LR MSA+Q Y WI
Sbjct: 678 EYGYAS--------LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWI-- 727
Query: 1265 TGTLRVDPEDEKRRVQKNPIYQAKVYKTLN-----------NRCMELRKTCNHPLLNYP- 1312
+ +N YK L+ N MEL+K CNH L P
Sbjct: 728 --------------LTRN-------YKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPP 766
Query: 1313 -----YFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQ 1367
Y + L++S GKL +LD++LI+L+ G+RVL+FS M ++LDIL EYL++RQ
Sbjct: 767 DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQ 826
Query: 1368 LVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNP 1427
++R+DG+ E R+ A+ FN+ S+ F FLLS RA G G+NL SADTV+I+D D NP
Sbjct: 827 FPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 886
Query: 1428 KNEEQAVARAHRIGQKREVKVIYM 1451
+N+ QA ARAHRIGQK++V + +
Sbjct: 887 QNDLQAQARAHRIGQKKQVNIYRL 910
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 331 bits (849), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 223/621 (35%), Positives = 334/621 (53%), Gaps = 93/621 (14%)
Query: 863 KRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLYKLGSKITAAKNQ 922
K+++ K D E R + + + P D Y LT Y++ +I A NQ
Sbjct: 347 KKLDNYKKKDQETKRWL----KNASPEDV--EYYNCQQELTDDLHKQYQIVERIIAHSNQ 400
Query: 923 QEVEEAANAAAAAARLQGLSEEEVRSAAACAGEE-VMIRNRF---LEMNAPRDGSSVNKY 978
+ AA + QGL E C+ E+ +I +F ++ R+ S +
Sbjct: 401 KS---AAGYPDYYCKWQGLPYSE------CSWEDGALISKKFQACIDEYFSRNQSKTTPF 451
Query: 979 YSLAHAVNER-----VMRQPSML---RAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGL 1030
+ +R + +QPS + LRDYQ+ GL W+ + + ILADEMGL
Sbjct: 452 KDCK-VLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGL 510
Query: 1031 GKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSR 1090
GKT+Q ++ + YL YGP L++VP + L +W+ E+ W ++ + Y+G + R+
Sbjct: 511 GKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNM 570
Query: 1091 L------FSQVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDL 1144
+ Q LKFN+L+TTYE ++ D++ L ++W +I +DEA R+K+ +S+L + L
Sbjct: 571 IRTHEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTL 630
Query: 1145 DRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADD 1204
++ RLL+TGTPLQN LKELWSLL+ ++PE F + W + F++E H
Sbjct: 631 IDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSS------W--EDFEEE---HGKGR 679
Query: 1205 DWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKA 1264
++ LH+ LEPF+LRR +DVE SLP KV +LR MSA+Q Y WI
Sbjct: 680 EYGYAS--------LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWI-- 729
Query: 1265 TGTLRVDPEDEKRRVQKNPIYQAKVYKTLN-----------NRCMELRKTCNHPLLNYP- 1312
+ +N YK L+ N MEL+K CNH L P
Sbjct: 730 --------------LTRN-------YKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPP 768
Query: 1313 -----YFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQ 1367
Y + L++S GKL +LD++LI+L+ G+RVL+FS M ++LDIL EYL++RQ
Sbjct: 769 DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQ 828
Query: 1368 LVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNP 1427
++R+DG+ E R+ A+ FN+ S+ F FLLS RA G G+NL SADTV+I+D D NP
Sbjct: 829 FPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 888
Query: 1428 KNEEQAVARAHRIGQKREVKV 1448
+N+ QA ARAHRIGQK++V +
Sbjct: 889 QNDLQAQARAHRIGQKKQVNI 909
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1 PE=1
SV=1
Length = 764
Score = 331 bits (849), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 208/574 (36%), Positives = 314/574 (54%), Gaps = 46/574 (8%)
Query: 894 RYAVLSSFLTQTE---EYLYKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRSAA 950
++ L LTQT+ E+L + IT + E ++A R + + + + A
Sbjct: 99 QFTKLDELLTQTQLYSEFLLEKMEDITINGIESESQKAEPEKTGRGRKRKAASQYNNTKA 158
Query: 951 ACAGEEVMIRNRFLEMNAPRDGSSVNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQ 1010
A ++ R++ DG ++N + V + +L G L+ YQ+ G++
Sbjct: 159 KRAVAAMISRSK-------EDGETINSDLTEEETVIKLQNELCPLLTGGQLKSYQLKGVK 211
Query: 1011 WMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY--GPHLIIVPNAVLVNWKSE 1068
W++SL+ N LNGILAD+MGLGKT+Q + +++L KGN GP+L+I P + L NW +E
Sbjct: 212 WLISLWQNGLNGILADQMGLGKTIQTIGFLSHL---KGNGLDGPYLVIAPLSTLSNWFNE 268
Query: 1069 LHKWLPSVSCIYYVGAKDQRSRL----FSQVAALKFNVLVTTYEFIMYDRSK-LSKVDWK 1123
+ ++ PS++ I Y G K+QR L + KF +++T+YE M D + L WK
Sbjct: 269 IARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWK 328
Query: 1124 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 1183
Y++IDE R+K+ + L R+L + +LLLTGTPLQN+L ELWSLLN +LP++F +
Sbjct: 329 YVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHD 388
Query: 1184 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 1243
F WF F ++ ++ E +++ ++ +LH IL PF+LRR DVE SLP K
Sbjct: 389 EFESWFD--FSEKNKNEATKEE--EEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRKK 444
Query: 1244 SIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKT 1303
I++ M+ Q + + TL + +N I LNN ++LRK
Sbjct: 445 EIIMYATMTDHQKKFQEHL-VNNTLEA-------HLGENAIRGQGWKGKLNNLVIQLRKN 496
Query: 1304 CNHP-LLN--------YPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTK 1354
CNHP LL YP ++ V CGK +L+R+L++L H+VL+FS TK
Sbjct: 497 CNHPDLLQGQIDGSYLYPPVEEI-----VGQCGKFRLLERLLVRLFANNHKVLIFSQWTK 551
Query: 1355 LLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQS 1414
LLDI++ Y + RIDG+ L++R I DF+ S C IFLLS RA G G+NL +
Sbjct: 552 LLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTA 611
Query: 1415 ADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1448
ADT I+YD D NP+ + QA+ R HRIGQ + V V
Sbjct: 612 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHV 645
>sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1
PE=1 SV=1
Length = 1365
Score = 331 bits (848), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 188/468 (40%), Positives = 270/468 (57%), Gaps = 57/468 (12%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LRDYQ+ GL W++ + + ILADEMGLGKT+Q + + YL + + YGP L +VP +
Sbjct: 205 LRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQHLYGPFLCVVPLS 264
Query: 1061 VLVNWKSELHKWLPSVSCIYYVGAKDQRSRL------FSQVAALKFNVLVTTYEFIMYDR 1114
+ W+ E +W P ++ + Y+G R + FS LKFN ++TTYE ++ DR
Sbjct: 265 TMTAWQREFQQWAPDINVVTYIGDVSSRDIIRQFEWSFSSSKRLKFNAILTTYEILLKDR 324
Query: 1115 SKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLL 1174
L W +++DEA R+K+ +S+L + L + RLL+TGTPLQN LKELW+LL+ +
Sbjct: 325 QFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFI 384
Query: 1175 LPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVED 1234
+P F++ + F + ++ T + +LH+ LEPF+LRR+ +D
Sbjct: 385 MPYKFESWEDF-----EKDHEDAATKGYE--------------KLHKQLEPFILRRQKKD 425
Query: 1235 VEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLN 1294
VE SLP KV +LR M++IQ Y WI + R+ K I T
Sbjct: 426 VEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSAL------RKGVKGSI------NTFI 473
Query: 1295 NRCMELRKTCNHPLLNYPYFSDLSKDF--------------LVKSCGKLWILDRILIKLQ 1340
N +EL+K CNH LL P +DF L++ GKL +LD++L +L+
Sbjct: 474 NIVIELKKCCNHALLTKP------EDFESRASLATSDAVEKLLRGSGKLLLLDKLLCRLK 527
Query: 1341 RTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFL 1400
TGHRVL+FS M ++LDIL EYLQ R ++R+DG+ E R+ A+ FN+ S F FL
Sbjct: 528 ETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFL 587
Query: 1401 LSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1448
LS RA G G+NL +ADTVII+D D NP+N+ QA ARAHRIGQK +V +
Sbjct: 588 LSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNI 635
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 329 bits (844), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/483 (38%), Positives = 276/483 (57%), Gaps = 55/483 (11%)
Query: 988 RVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFK 1047
++ +QPS + G LRD+Q+ G+ WM L++ NGILADEMGLGKTVQ +A ++YL
Sbjct: 362 KLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSL 421
Query: 1048 GNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL------FSQVAALKFN 1101
+GP L++VP + + W+ L W ++CI Y+G R + +KFN
Sbjct: 422 RQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFN 481
Query: 1102 VLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQ 1161
+L+TTYE+++ DRS LS + W+Y+ IDEA R+K+ ES L L +++ RLL+TGTPLQ
Sbjct: 482 LLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQ 541
Query: 1162 NDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQ 1221
N+++EL +L++ L+P F+ R + E P E++ I L +
Sbjct: 542 NNIRELAALVDFLMPGKFEIR--------EEINLEAPD----------EEQEAYIRSLQE 583
Query: 1222 ILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQK 1281
L+P++LRR +DVE SLP K +LR +S +Q Y I T RV
Sbjct: 584 HLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNI-LTRNYRV----------L 632
Query: 1282 NPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF----------------LVKS 1325
+ +L N +EL+K NHP L F + + + L+ +
Sbjct: 633 TQSISSGSQISLLNIVVELKKASNHPYL----FDGVEESWMQKINSQGRRDEVLKGLIMN 688
Query: 1326 CGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESA 1385
GK+ +LD++L +L+R GHRVL+FS M ++LDIL +YL R ++R+DGT R ++
Sbjct: 689 SGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTS 748
Query: 1386 IVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKRE 1445
I FN+ +S F+FLLS RA G G+NL +ADTVII+D D NP+ + QA+ARAHRIGQK
Sbjct: 749 IDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNH 808
Query: 1446 VKV 1448
V V
Sbjct: 809 VMV 811
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/495 (38%), Positives = 274/495 (55%), Gaps = 75/495 (15%)
Query: 992 QPSMLRAGT---LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 1048
QP+ L GT L YQI G+ W+ + ++ ILADEMGLGKT+Q + + L +
Sbjct: 719 QPAFLE-GTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGH 777
Query: 1049 NYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL-------------FSQV 1095
GP L+ VP + LVNW+ E W P CI Y+G KD R+ + S+V
Sbjct: 778 CRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKV 837
Query: 1096 AAL-----KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQ 1150
+ L KFNVL+T+YE I D + L +DW +++DEA R+K +S R L+ Y
Sbjct: 838 SRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIA 897
Query: 1151 RRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETE 1210
+LLLTGTPLQN+L+EL+ LLN L + F++ +AF F+ ++E
Sbjct: 898 YKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSKEEQ------------- 944
Query: 1211 KKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRV 1270
+ RLH++L P MLRR DV ++P K ++R +SA+Q Y +I
Sbjct: 945 -----VKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFI-------- 991
Query: 1271 DPEDEKRRVQKNPIYQAKVYKTLNNRC------MELRKTCNHPLLNYPYFSDLSK----- 1319
+ KN Y+A K+ C M+L+K CNHP L +P ++ +
Sbjct: 992 --------LTKN--YEALNSKSGGGSCSLINIMMDLKKCCNHPYL-FPSAAEEATTAAGG 1040
Query: 1320 ----DFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDG 1375
+ L K+ GKL +L ++L +L+ HRVL+FS MTK+LDILE++L+ Q Y RIDG
Sbjct: 1041 LYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDG 1100
Query: 1376 TTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVA 1435
+ R+ AI FN+ + F+FLLS RA G G+NL +ADTVIIYD D NP N+ QA +
Sbjct: 1101 GITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFS 1160
Query: 1436 RAHRIGQKREVKVIY 1450
RAHRIGQ +V +IY
Sbjct: 1161 RAHRIGQANKV-MIY 1174
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 322 bits (824), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 188/501 (37%), Positives = 277/501 (55%), Gaps = 61/501 (12%)
Query: 998 AGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIV 1057
G L YQ+ GL W+ ++N + ILADEMGLGKTVQ + + LM+ GP LI
Sbjct: 599 GGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAA 658
Query: 1058 PNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL----FSQVAA---------------- 1097
P + ++NW+ E +W P + YVG +D R L FS V
Sbjct: 659 PLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTEN 718
Query: 1098 LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTG 1157
+KF+VL+T+YE I D++ LS ++W +++DEA R+K+ +S+ ++L+ Y R+LLTG
Sbjct: 719 MKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTG 778
Query: 1158 TPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIH 1217
TPLQN+L+EL+ LLN L E F+ +AF F++ +++ I
Sbjct: 779 TPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQ------------------IE 820
Query: 1218 RLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKR 1277
+LH +L P MLRR DV +P K +++R +SA+Q W K T D + K
Sbjct: 821 KLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKK---WYKNILTRNFDALNVK- 876
Query: 1278 RVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKD--------FLVKSCGKL 1329
+L N MEL+K CNHP L + K+ L+K+ GK
Sbjct: 877 --------NGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKF 928
Query: 1330 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDF 1389
+L ++L KL+ GHRVL+FS MT++LDI+E+ ++ Y RIDG+ + R+ AI +
Sbjct: 929 VLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRY 988
Query: 1390 NSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV- 1448
N+ + FIFLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHR+GQK +V +
Sbjct: 989 NAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIY 1048
Query: 1449 --IYMEAVVDKISSHQKEDEL 1467
+ ++V +KI+S K+ L
Sbjct: 1049 RFVTKKSVEEKITSVAKKKML 1069
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 320 bits (821), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 199/553 (35%), Positives = 293/553 (52%), Gaps = 90/553 (16%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ G+ W+L + N+ N ILADEMGLGKT+Q +A + + G +GP L+I P +
Sbjct: 813 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLS 871
Query: 1061 VLVNWKSELHKWLPSVSCIYY-------------VGAKDQRSRLFSQVAALKFNVLVTTY 1107
+ NW+ E + W + +Y+ + KD R RL A KF+ L+TT+
Sbjct: 872 TITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTF 929
Query: 1108 EFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKEL 1167
E I+ D +L +++W+ +IIDEA R+K+R L L + ++LLTGTPLQN ++EL
Sbjct: 930 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 989
Query: 1168 WSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFM 1227
+SLL+ L P F + F F L+TE++V +L IL+P M
Sbjct: 990 FSLLHFLEPSQFPSESEFLKDFGD---------------LKTEEQV---QKLQAILKPMM 1031
Query: 1228 LRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQA 1287
LRR EDVE +L PK ++ ++ IQ Y I ++KN + +
Sbjct: 1032 LRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFLS 1075
Query: 1288 KVYKTLN-----NRCMELRKTCNHPLL---------------NYPYFSDLSKDFLVKSCG 1327
K N N MELRK CNHP L + D +V+S G
Sbjct: 1076 KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAG 1135
Query: 1328 KLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIV 1387
KL ++D++L KL+ GH+VL+FS M + LDILE+YL R+ +Y RIDG R++AI
Sbjct: 1136 KLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAID 1195
Query: 1388 DFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVK 1447
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + VK
Sbjct: 1196 RFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 1255
Query: 1448 VIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQQYK 1501
V + I+ + E E+ ++ L D ++G+D G+I G IQQ+
Sbjct: 1256 VYRL------ITRNSYEREMFDKASLKLGLDKAVLQSMSGRD---GNITG-----IQQFS 1301
Query: 1502 IDMADEVINAGRF 1514
++++ G +
Sbjct: 1302 KKEIEDLLRKGAY 1314
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 320 bits (820), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 199/553 (35%), Positives = 294/553 (53%), Gaps = 90/553 (16%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ G+ W+L + N+ N ILADEMGLGKT+Q +A + + G +GP L+I P +
Sbjct: 811 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLS 869
Query: 1061 VLVNWKSELHKWLPSVSCIYY-------------VGAKDQRSRLFSQVAALKFNVLVTTY 1107
+ NW+ E + W + +Y+ + KD R RL A KF+ L+TT+
Sbjct: 870 TITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTF 927
Query: 1108 EFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKEL 1167
E I+ D +L +++W+ +IIDEA R+K+R L L + ++LLTGTPLQN ++EL
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 987
Query: 1168 WSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFM 1227
+SLL+ L P F + F F L+TE++V +L IL+P M
Sbjct: 988 FSLLHFLEPSQFPSESEFLKDFGD---------------LKTEEQV---QKLQAILKPMM 1029
Query: 1228 LRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQA 1287
LRR EDVE +L PK ++ ++ IQ Y I ++KN + +
Sbjct: 1030 LRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFLS 1073
Query: 1288 KVYKTLN-----NRCMELRKTCNHPLLNYPYFSDLSKDF---------------LVKSCG 1327
K N N MELRK CNHP L + +F +V+S G
Sbjct: 1074 KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAG 1133
Query: 1328 KLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIV 1387
KL ++D++L KL+ GH+VL+FS M + LDILE+YL R+ +Y RIDG R++AI
Sbjct: 1134 KLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAID 1193
Query: 1388 DFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVK 1447
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + VK
Sbjct: 1194 RFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 1253
Query: 1448 VIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQQYK 1501
V + I+ + E E+ ++ L D ++G+D G+I G IQQ+
Sbjct: 1254 VYRL------ITRNSYEREMFDKASLKLGLDKAVLQSMSGRD---GNITG-----IQQFS 1299
Query: 1502 IDMADEVINAGRF 1514
++++ G +
Sbjct: 1300 KKEIEDLLRKGAY 1312
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 199/553 (35%), Positives = 293/553 (52%), Gaps = 90/553 (16%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ G+ W+L + N+ N ILADEMGLGKT+Q +A + + G +GP L+I P +
Sbjct: 811 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLS 869
Query: 1061 VLVNWKSELHKWLPSVSCIYY-------------VGAKDQRSRLFSQVAALKFNVLVTTY 1107
+ NW+ E + W + +Y+ + KD R RL A KF+ L+TT+
Sbjct: 870 TITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTF 927
Query: 1108 EFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKEL 1167
E I+ D +L +++W+ +IIDEA R+K+R L L + ++LLTGTPLQN ++EL
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 987
Query: 1168 WSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFM 1227
+SLL+ L P F + F F L+TE++V +L IL+P M
Sbjct: 988 FSLLHFLEPSQFPSESEFLKDFGD---------------LKTEEQV---QKLQAILKPMM 1029
Query: 1228 LRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQA 1287
LRR EDVE +L PK ++ ++ IQ Y I ++KN + +
Sbjct: 1030 LRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFLS 1073
Query: 1288 KVYKTLN-----NRCMELRKTCNHPLL---------------NYPYFSDLSKDFLVKSCG 1327
K N N MELRK CNHP L + D +V+S G
Sbjct: 1074 KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAG 1133
Query: 1328 KLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIV 1387
KL ++D++L KL+ GH+VL+FS M + LDILE+YL R+ +Y RIDG R++AI
Sbjct: 1134 KLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAID 1193
Query: 1388 DFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVK 1447
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + VK
Sbjct: 1194 RFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 1253
Query: 1448 VIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQQYK 1501
V + I+ + E E+ ++ L D ++G+D G+I G IQQ+
Sbjct: 1254 VYRL------ITRNSYEREMFDKASLKLGLDKAVLQSMSGRD---GNITG-----IQQFS 1299
Query: 1502 IDMADEVINAGRF 1514
++++ G +
Sbjct: 1300 KKEIEDLLRKGAY 1312
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/479 (37%), Positives = 267/479 (55%), Gaps = 58/479 (12%)
Query: 998 AGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIV 1057
GTL YQ+ GL W+ + + ILADEMGLGKTVQ + + L + + GP+L+
Sbjct: 697 GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSA 756
Query: 1058 PNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL----FS----------------QVAA 1097
P + ++NW+ E W P + Y G K+ RS + FS +
Sbjct: 757 PLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQ 816
Query: 1098 LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTG 1157
+KF+VL+T+YE I D++ L ++W +++DEA R+K+ +S R L+ Y+ +LLLTG
Sbjct: 817 IKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTG 876
Query: 1158 TPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIH 1217
TPLQN+L+EL+ LLN L PE F+N + F + F+ +++ I
Sbjct: 877 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQ------------------IK 918
Query: 1218 RLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKR 1277
+LH +L P MLRR DV ++P K +++R +S +Q Y +I ++ +
Sbjct: 919 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGN 978
Query: 1278 RVQKNPIYQAKVYKTLNNRCMELRKTCNHPLL------NYPYFSDLSKD--FLVKSCGKL 1329
+V +L N M+L+K CNHP L P + S D LVKS GKL
Sbjct: 979 QV------------SLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1026
Query: 1330 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDF 1389
+L ++L KL+ GHRVL+FS MTK+LD+LE++L++ Y RIDG + R+ AI F
Sbjct: 1027 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1086
Query: 1390 NSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1448
N+ + F FLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHRIGQ ++V +
Sbjct: 1087 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1145
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 291/525 (55%), Gaps = 59/525 (11%)
Query: 996 LRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLI 1055
L A LR YQ+ G++W+ N+ IL DEMGLGKT Q ++L+AY GP L+
Sbjct: 30 LGAIHLRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLV 89
Query: 1056 IVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVAAL-KFNVLVTTYEFIMYDR 1114
+ P AVL NW+ EL ++ PS+S I Y G K++R+ L + + +F+VL+TTYE + D
Sbjct: 90 LCPLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQNLKSDPRFHVLLTTYEMCLKDA 149
Query: 1115 SKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLL 1174
L WK +++DEA R+K++ES+L + L + R+LLTGTP+QN+L+E++SLL +
Sbjct: 150 RYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFI 209
Query: 1175 LPEVF------DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFML 1228
P VF D A+ D ++P ++ LHQ+L+PF+L
Sbjct: 210 QPSVFLPEAVEDFVNAYADIQTEP---------------------ALVDELHQVLQPFLL 248
Query: 1229 RRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEKRRVQKNPIYQ 1286
RR +V LP K +V+ +SA+Q Y I + R D + R
Sbjct: 249 RRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQSTKTR--------- 299
Query: 1287 AKVYKTLNNRCMELRKTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDRILIKLQ 1340
L N M+LRK +HP L F + + LV++ GKL +LD +L LQ
Sbjct: 300 ------LLNVLMQLRKCVDHPYL----FDGVEPEPFEMGEHLVEASGKLSLLDSMLAYLQ 349
Query: 1341 RTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFL 1400
GH VLLFS MT++LDIL++YL++R Y R+DG+ E+R AI +F++ D FIFL
Sbjct: 350 EGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFST--KDVFIFL 407
Query: 1401 LSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEA--VVDKI 1458
LS +A G G+NL +ADTVI D D NP+N+ QA ARAHRIGQ R VKVI + +++I
Sbjct: 408 LSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEI 467
Query: 1459 SSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKID 1503
+ +LR TV E + D+ + GL + I ++ +D
Sbjct: 468 IYSRAVSKLRLTDTVIEEGRFSLLDQAQSAASGLQLSEILKFGVD 512
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 187/490 (38%), Positives = 270/490 (55%), Gaps = 63/490 (12%)
Query: 992 QPSMLRA--GTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGN 1049
QP + A GTL YQ+ GL W+ + + ILADEMGLGKT+Q + + L +
Sbjct: 725 QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 784
Query: 1050 YGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL----FS------------ 1093
GP L+ P + ++NW+ E W P + Y G KD R+ + FS
Sbjct: 785 KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKA 844
Query: 1094 ----QVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRC 1149
+ A +KF+VL+T+YE I D++ L + W +++DEA R+K+ +S R L+ Y+
Sbjct: 845 FKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKI 904
Query: 1150 QRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLET 1209
+LLLTGTPLQN+L+EL+ LLN L PE F+N + F + F+ +++
Sbjct: 905 DHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQ------------ 952
Query: 1210 EKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLR 1269
I +LH +L P MLRR DV ++P K +++R +S +Q Y +I L
Sbjct: 953 ------IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYI-----LT 1001
Query: 1270 VDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF-------- 1321
+ E R N + +L N M+L+K CNHP L +P + S
Sbjct: 1002 RNFEALNSRGGGNQV-------SLLNIMMDLKKCCNHPYL-FPVAAMESPKLPSGAYEGG 1053
Query: 1322 -LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLE 1380
L+KS GKL +L ++L KL+ GHRVL+FS MTK+LD+LE++L + Y RIDG +
Sbjct: 1054 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1113
Query: 1381 DRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRI 1440
R+ AI FN+ + F FLLS RA G G+NL +ADTVII+D D NP N+ QA +RAHRI
Sbjct: 1114 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1173
Query: 1441 GQKREVKVIY 1450
GQ +V +IY
Sbjct: 1174 GQANKV-MIY 1182
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 184/487 (37%), Positives = 265/487 (54%), Gaps = 60/487 (12%)
Query: 992 QPSML--RAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGN 1049
QP + G L YQ+ G+ W+ ++N + ILADEMGLGKTVQ + + LM+
Sbjct: 605 QPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHT 664
Query: 1050 YGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL----FSQVAA-------- 1097
GP LI P + ++NW+ E W P + YVG ++ R + FS V
Sbjct: 665 KGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKV 724
Query: 1098 --------LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRC 1149
LKF+VL+T+YE I D++ LS +DW +++DEA R+K+ +S ++L Y
Sbjct: 725 SKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNI 784
Query: 1150 QRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLET 1209
Q R+LLTGTPLQN+L+EL+ LLN L P+ F+ ++F FS+ +++
Sbjct: 785 QYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQ------------ 832
Query: 1210 EKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLR 1269
I +LH +L P MLRR DV +P K +++R +SA+Q Y K T
Sbjct: 833 ------IEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYY---KNILTRN 883
Query: 1270 VDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSK--------DF 1321
D + K +L N MEL+K CNHP L + K
Sbjct: 884 FDALNVK---------NGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSA 934
Query: 1322 LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLED 1381
L+K+ GK +L ++L KL+ GHRVL+FS MT +LDILE++ Y RIDG+ + +
Sbjct: 935 LIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQ 994
Query: 1382 RESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIG 1441
R+ AI +N+ + F+FLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHR+G
Sbjct: 995 RQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLG 1054
Query: 1442 QKREVKV 1448
QK +V +
Sbjct: 1055 QKHKVMI 1061
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 318 bits (814), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 185/458 (40%), Positives = 263/458 (57%), Gaps = 45/458 (9%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR YQ+ G+ W++ ++ + IL DEMGLGKT Q +AL+ YL+ + GP L++ P +
Sbjct: 40 LRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVLCPLS 99
Query: 1061 VLVNWKSELHKWLPSVSCIYYVGAKDQRSRL---FSQVAALKFNVLVTTYEFIMYDRSKL 1117
VL NWK E+ ++ P +SC+ Y G K++R+RL Q + F+VL+TTYE + D S L
Sbjct: 100 VLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESG--FHVLLTTYEICLKDASFL 157
Query: 1118 SKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPE 1177
W + +DEA R+K++ S+L R L + RLLLTGTP+QN L+EL+SLL ++ P+
Sbjct: 158 KSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLCVVEPD 217
Query: 1178 VFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 1237
+F R+ D F Q +Q + EK+ LH++L+PF+LRR V
Sbjct: 218 LF-CREQVED-FVQRYQ-------------DIEKESKSASELHRLLQPFLLRRVKAQVAT 262
Query: 1238 SLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRC 1297
LP K +V+ MSA+Q Y I + E K+ L N
Sbjct: 263 ELPKKTEVVVYHGMSALQKKYYKAILMKDLDAFENETAKK-------------VKLQNIL 309
Query: 1298 MELRKTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDRILIKLQRTGHRVLLFST 1351
+LRK +HP L F + + L+++ GKL +LDR+L L GHRVLLFS
Sbjct: 310 TQLRKCVDHPYL----FDGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQ 365
Query: 1352 MTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLN 1411
MT +LDIL++Y+ +R Y R+DG+ E+R AI +F + F+FLLS RA G G+N
Sbjct: 366 MTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG--NQPIFVFLLSTRAGGVGMN 423
Query: 1412 LQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1449
L +ADTVI D D NP+N+ QA ARAHRIGQ + VKVI
Sbjct: 424 LTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVI 461
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 316 bits (809), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/480 (38%), Positives = 261/480 (54%), Gaps = 68/480 (14%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ G+ W+L + N+ N ILADEMGLGKT+Q + ++ + +G +GP LII P +
Sbjct: 461 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIF-LRGIHGPFLIIAPLS 519
Query: 1061 VLVNWKSELHKWLPSVSCIYYVGAKDQRSRL--FSQV----------AALKFNVLVTTYE 1108
+ NW+ E W ++ I Y G++ R + + V KF+V++TT+E
Sbjct: 520 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 578
Query: 1109 FIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELW 1168
I+ D +L K+ W +IIDEA R+K+R L L + ++LLTGTPLQN ++EL+
Sbjct: 579 MILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 638
Query: 1169 SLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFML 1228
SLLN L P F + AF + F L+TE++V +L IL+P ML
Sbjct: 639 SLLNFLEPSQFPSETAFLEEFGD---------------LKTEEQV---KKLQSILKPMML 680
Query: 1229 RRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAK 1288
RR +DVE +L PK ++ ++ IQ Y I ++KN + K
Sbjct: 681 RRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFLTK 724
Query: 1289 VYKTLN-----NRCMELRKTCNHPLL---------------NYPYFSDLSKDFLVKSCGK 1328
N N MELRK CNHP L + P D ++++ GK
Sbjct: 725 GANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGK 784
Query: 1329 LWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVD 1388
L ++D++L KL GH+VL+FS M + LDILE+YL R+ Y RIDG R++AI
Sbjct: 785 LVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDR 844
Query: 1389 FNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 1448
F DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + VKV
Sbjct: 845 FCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKV 904
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/490 (38%), Positives = 271/490 (55%), Gaps = 57/490 (11%)
Query: 985 VNERVMRQPSMLRAGTLR--DYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAY 1042
+N++ QP L+ L+ +QI G+ W+ + + ILADEMGLGKT+Q + +
Sbjct: 249 LNKKYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYS 308
Query: 1043 LMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRL------FSQVA 1096
L + GP LI VP + L NW+ EL W P + C+ YVG K R+ + F +V
Sbjct: 309 LFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVT 368
Query: 1097 A---------LKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRY 1147
KFNV++T+YEFI D + L +DW +++DEA R++ +S R L +Y
Sbjct: 369 TKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKY 428
Query: 1148 RCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWL 1207
R +LLLTGTPLQN+L+EL+ LLN L F++ + F F+ ++E
Sbjct: 429 RIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTDVSKEEQ---------- 478
Query: 1208 ETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGT 1267
+ RLH+ILEP MLRR DV S+PPK ++R +S++Q Y I T
Sbjct: 479 --------VKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHI-LTKN 529
Query: 1268 LRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSD---------LS 1318
+ + RV +L N M+LRK CNHP L +P ++
Sbjct: 530 FKALNQKGGGRVC-----------SLLNIMMDLRKCCNHPYL-FPSAAEEATISPSGLYE 577
Query: 1319 KDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTS 1378
L K+ GKL +L ++L +L+ HRVLLFS MTK+L++LE +L+ Y RIDG+
Sbjct: 578 MSSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIK 637
Query: 1379 LEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAH 1438
+ R+ AI FN S+ F+FLLS RA G G+NL +ADTVII+D D NP N+ QA +RAH
Sbjct: 638 GDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAH 697
Query: 1439 RIGQKREVKV 1448
R+GQK++V +
Sbjct: 698 RMGQKKKVMI 707
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 315 bits (806), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 186/472 (39%), Positives = 266/472 (56%), Gaps = 42/472 (8%)
Query: 985 VNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLM 1044
V E+ +RQ L LR YQ+ G+ W+ ++ + IL DEMGLGKT Q +AL YL
Sbjct: 33 VQEQDLRQWG-LTGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLA 91
Query: 1045 EFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVA-ALKFNVL 1103
+ GP LI+ P +VL NWK E+ ++ P +SC+ Y G KD+R+ L + +F+VL
Sbjct: 92 GRLNDEGPFLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVL 151
Query: 1104 VTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQND 1163
+TTYE + D S L W +++DEA R+K++ S+L + L + LLLTGTP+QN
Sbjct: 152 LTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNS 211
Query: 1164 LKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQIL 1223
L+EL+SLL+ + P++F + + F Q +Q + EK+ L+++L
Sbjct: 212 LQELYSLLSFVEPDLFSKEQV--EDFVQRYQ-------------DIEKESESASELYKLL 256
Query: 1224 EPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNP 1283
+PF+LRR +V LP K +V+ MSA+Q Y I + E K+
Sbjct: 257 QPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKK------ 310
Query: 1284 IYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDRILI 1337
L N +LRK +HP L F + D L+++ GKL +LD++L
Sbjct: 311 -------VKLQNVLSQLRKCVDHPYL----FDGVEPEPFEIGDHLIEASGKLHLLDKLLA 359
Query: 1338 KLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCF 1397
L GHRVLLFS MT++LDIL++YL +R Y R+DG+ E+R AI +F F
Sbjct: 360 FLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQ--PIF 417
Query: 1398 IFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1449
FLLS RA G G+NL +ADTVI +D D NP+N+ QA ARAHRIGQ + VKVI
Sbjct: 418 TFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVI 469
>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
PE=1 SV=2
Length = 2885
Score = 314 bits (805), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 191/538 (35%), Positives = 284/538 (52%), Gaps = 84/538 (15%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ GL W+L + N+ N ILADEMGLGKT+Q + + Y + G GP LII P +
Sbjct: 859 LREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGIRGPFLIIAPLS 917
Query: 1061 VLVNWKSELHKWLPSVSCIYYVGA--------------KDQRSRLFSQVAALKFNVLVTT 1106
+ NW+ E W ++ + Y G+ +D + R+ A +F ++TT
Sbjct: 918 TIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITT 974
Query: 1107 YEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKE 1166
+E I+ +L+ +DW+ +IIDEA R+K++ L L + ++LLTGTPLQN ++E
Sbjct: 975 FEMILGGCGELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEE 1034
Query: 1167 LWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPF 1226
L+SLL+ L P F + F F L+TE++V +L IL+P
Sbjct: 1035 LFSLLHFLEPLRFPSESTFMQEFGD---------------LKTEEQV---QKLQAILKPM 1076
Query: 1227 MLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQ 1286
MLRR EDVE L PK ++ ++ IQ Y I ++KN +
Sbjct: 1077 MLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAI----------------LEKNFSFL 1120
Query: 1287 AKVYKTLN-----NRCMELRKTCNHPLL--------------NY-PYFSDLSKDFLVKSC 1326
+K N N MELRK CNHP L Y P SD +++S
Sbjct: 1121 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQAMIQSA 1180
Query: 1327 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAI 1386
GKL ++D++L K++ GH+VL+FS M + LDILE+YL ++ +Y RIDG R++AI
Sbjct: 1181 GKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAI 1240
Query: 1387 VDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREV 1446
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + V
Sbjct: 1241 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAV 1300
Query: 1447 KVIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQ 1498
KV + ++ + E E+ ++ L D ++G+D + I+ L + I+
Sbjct: 1301 KVYRL------VTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIE 1352
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 314 bits (804), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 186/477 (38%), Positives = 266/477 (55%), Gaps = 42/477 (8%)
Query: 982 AHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIA 1041
A V E+ +RQ L LR YQ+ G+ W+ ++ + IL DEMGLGKT Q +AL
Sbjct: 28 AARVQEQDLRQWG-LTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFI 86
Query: 1042 YLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIYYVGAKDQRSRLFSQVA-ALKF 1100
YL + GP LI+ P +VL NWK E+ ++ P +SC+ Y G K++R+ L + +F
Sbjct: 87 YLAGRLNDEGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRF 146
Query: 1101 NVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPL 1160
+VL+TTYE + D S L W +++DEA R+K++ S+L + L + LLLTGTP+
Sbjct: 147 HVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPI 206
Query: 1161 QNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLH 1220
QN L+EL+SLL+ + P++F + F Q +Q + EK+ LH
Sbjct: 207 QNSLQELYSLLSFVEPDLFSKEEVGD--FIQRYQ-------------DIEKESESASELH 251
Query: 1221 QILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQ 1280
++L+PF+LRR +V LP K +V+ MSA+Q Y I + E K+
Sbjct: 252 KLLQPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKK--- 308
Query: 1281 KNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDR 1334
L N +LRK +HP L F + D L ++ GKL +LD+
Sbjct: 309 ----------VKLQNILSQLRKCVDHPYL----FDGVEPEPFEVGDHLTEASGKLHLLDK 354
Query: 1335 ILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDS 1394
+L L GHRVLLFS MT++LDIL++Y+ +R Y R+DG+ E+R AI +F
Sbjct: 355 LLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQ-- 412
Query: 1395 DCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 1451
F+FLLS RA G G+NL +ADTVI D D NP+N+ QA ARAHRIGQ + VKVI +
Sbjct: 413 PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRL 469
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 313 bits (802), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 190/539 (35%), Positives = 285/539 (52%), Gaps = 86/539 (15%)
Query: 1001 LRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1060
LR+YQ+ G+ W+L + N N ILADEMGLGKT+Q + + Y + KG +GP L+I P +
Sbjct: 958 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPLS 1016
Query: 1061 VLVNWKSELHKWLPSVSCIYYVGA--------------KDQRSRLFSQVAALKFNVLVTT 1106
+ NW+ E W ++ + Y G+ KD + R+ + KF+ ++TT
Sbjct: 1017 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIK--GSYKFHAIITT 1073
Query: 1107 YEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKE 1166
+E I+ D +L + W+ ++IDEA R+K+R L L + ++LLTGTPLQN ++E
Sbjct: 1074 FEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEE 1133
Query: 1167 LWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPF 1226
L+SLL+ L P F + F F L+TE++V +L IL+P
Sbjct: 1134 LFSLLHFLEPSRFPSETTFMQEFGD---------------LKTEEQV---QKLQAILKPM 1175
Query: 1227 MLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIY- 1285
MLRR EDVE +L PK ++ ++ IQ Y I ++KN +
Sbjct: 1176 MLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAI----------------LEKNFTFL 1219
Query: 1286 -----QAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF---------------LVKS 1325
QA V LN MELRK CNHP L + ++F ++++
Sbjct: 1220 SKGGGQANVPNLLNT-MMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQA 1278
Query: 1326 CGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESA 1385
GKL ++D++L KL+ GHRVL+FS M + LDILE+YL R+ Y RIDG R++A
Sbjct: 1279 AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAA 1338
Query: 1386 IVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKRE 1445
I F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ +
Sbjct: 1339 IDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKS 1398
Query: 1446 VKVIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQ 1498
VK+ + I+ + E E+ ++ L D ++G++ ++ L + I+
Sbjct: 1399 VKIYRL------ITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIE 1451
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 832,319,555
Number of Sequences: 539616
Number of extensions: 36987956
Number of successful extensions: 155404
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 1398
Number of HSP's that attempted gapping in prelim test: 122319
Number of HSP's gapped (non-prelim): 18188
length of query: 2239
length of database: 191,569,459
effective HSP length: 134
effective length of query: 2105
effective length of database: 119,260,915
effective search space: 251044226075
effective search space used: 251044226075
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 70 (31.6 bits)