BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000107
(2191 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359476049|ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
vinifera]
Length = 2181
Score = 2860 bits (7414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1501/2205 (68%), Positives = 1726/2205 (78%), Gaps = 60/2205 (2%)
Query: 1 MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDG 60
MAS S R RIDQF++SKKRK SP +K+GR EKD+K V+ SPS+KGTLDNYL DD
Sbjct: 1 MASDSIRNRIDQFFSSKKRKPLSPGLKTGRIEKDSKRAVDGSPSSKGTLDNYLVTYPDDN 60
Query: 61 HTSKQSLLSRHEVVKRNLSLEIDKYSKDEKNQALLSDQAQPQATQKV------ISRCSSK 114
T++ S + V KRNL+LEI+ SKDE ALLS Q T+ SR S+
Sbjct: 61 STARGSSAGKGPV-KRNLTLEINLPSKDENENALLSGQLGHGTTEAFGETHTENSRGLSQ 119
Query: 115 EGNSEVGCHMKDGS--AHIPESLELKQFPTDFLSLYCSEIHSSASSPSEAKLKDHKRHSS 172
G VG +KD S AH P + ELKQ DFLSLYCSE SSAS PS K+ +KR S
Sbjct: 120 MGGVGVGEQLKDCSVSAHGPVNSELKQIAADFLSLYCSEFPSSASLPSGLKVNVNKRCGS 179
Query: 173 PSLLGGEDNKIAKKKYCVSNLLQS---GEQTTCSNAKNIEETQSGFIVKTGNLVPNSSQR 229
PSL + N+I+KK++C++N QS GE + C N N E+ Q G IVK + +SS+
Sbjct: 180 PSLQDVK-NEISKKRHCIANADQSRLEGEDS-CLNENNYEDGQLGLIVKPVERIFDSSRE 237
Query: 230 VTDSNASLLLQASLRKCDKSSKSTLNTTACYTPEPSIVKTYVRETPKSTCGNSIFSPGEA 289
VT N + +Q SLRK ++ KST+N T CYTP P V + ETP S G+S+FSPGE+
Sbjct: 238 VTVGNDATEVQGSLRKSNERLKSTVNMTECYTPGPLTVNAFAHETPNSMRGSSMFSPGES 297
Query: 290 FWNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNEINNSYNLRNKNYN-KSKEMLNEGDS 348
FWNEAI++ADG FA + E I +KS+ E+ NS NLRN K KEML +GD
Sbjct: 298 FWNEAIQVADGLFA------PKTDEQINAAKSEYEMKNSCNLRNAGCGFKLKEMLVDGDC 351
Query: 349 KVQHIKAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFEDKNLKGTKPGCGAADTSEAMMF 408
V+ ++ G S +G V DS ++SPLP+K DFLFE+KNL T P +AD + M
Sbjct: 352 TVEGMEIGVSSGSLGYRVKDS-DQVSPLPVKRFDFLFEEKNLDETNPPHCSADKLDVM-- 408
Query: 409 RDGVVSEKGSVTHKSCQKIKFKCHHDNTSRTEGISDVQEKDSVLIVHERKLDISSQGIDS 468
DG S GSV HK + + G+S+V++ +S+ +R++D+ SQ D+
Sbjct: 409 -DGEQSACGSVNHKVLKTTGIVIDYCKAQTNGGMSEVKDMNSIDAEAKREVDLLSQEKDN 467
Query: 469 ITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPW 528
I +DSP I K + + DEA TPSS LKD LDLS WLPSEIC+IY+K+GISKLY W
Sbjct: 468 IKADSPDLGITKSIIACECDEASTPSSFEPLKDSLDLSKWLPSEICNIYRKKGISKLYSW 527
Query: 529 QVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAE 588
QV+CL VDGVLQ+RNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAE
Sbjct: 528 QVDCLKVDGVLQKRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAE 587
Query: 589 HLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVI 648
HLEVLLEPLG+HVRSYYGNQGGG+LPKDTSVAVCTIEKANSL+NR+LEEGRLSEIGIIVI
Sbjct: 588 HLEVLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEIGIIVI 647
Query: 649 DELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSAT 708
DELHMV DQNRGYLLELLLTKLRYAAGEG +S SGE+S SSGK+DPAHGLQIVGMSAT
Sbjct: 648 DELHMVGDQNRGYLLELLLTKLRYAAGEGHVESVSGESSNMSSGKSDPAHGLQIVGMSAT 707
Query: 709 MPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHI 768
MPNVAAVADWLQAALY+T+FRPVPLEEYIKVGN IY KKMD++RTI A+LGGKDPDHI
Sbjct: 708 MPNVAAVADWLQAALYQTDFRPVPLEEYIKVGNTIYDKKMDIIRTISKTADLGGKDPDHI 767
Query: 769 VELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALR 828
VELC+EVVQEGHSVL+FCSSRKGCE TARHVSKFLKKFS N H++ EF+DI+SAIDALR
Sbjct: 768 VELCNEVVQEGHSVLLFCSSRKGCEFTARHVSKFLKKFSTNAHNNTGEFVDISSAIDALR 827
Query: 829 RCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPAR 888
R PAGLDP+LEETLPSGVAYHHAGLTVEER++VETCYRKGL+RVLTATSTLAAGVNLPAR
Sbjct: 828 RSPAGLDPILEETLPSGVAYHHAGLTVEERDIVETCYRKGLLRVLTATSTLAAGVNLPAR 887
Query: 889 RVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPL 948
RVIFRQPRIGRDFIDGTRY+QMAGRAGRTGIDTKGES+LICKPEEVK+I GLLNESCPPL
Sbjct: 888 RVIFRQPRIGRDFIDGTRYKQMAGRAGRTGIDTKGESVLICKPEEVKRICGLLNESCPPL 947
Query: 949 HSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLC 1008
+SCLSEDKNGMTHAILEVVA GIVQTA DI+RYVRCTLLNSTKPFQDVVKSAQDSLRWLC
Sbjct: 948 YSCLSEDKNGMTHAILEVVASGIVQTANDINRYVRCTLLNSTKPFQDVVKSAQDSLRWLC 1007
Query: 1009 HRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLST 1068
HRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESL+VLDDLSRAREGFVLASDLHLVYL T
Sbjct: 1008 HRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLVVLDDLSRAREGFVLASDLHLVYLVT 1067
Query: 1069 PINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGL 1128
PINV+VEPDWEL+YERF++LSALDQSVGN+VGV EP+LMRMAHGAPM S+K R++ KGL
Sbjct: 1068 PINVDVEPDWELFYERFMQLSALDQSVGNRVGVVEPFLMRMAHGAPMCASNKSRNNGKGL 1127
Query: 1129 HGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQAL 1188
H K + RLGIT ++LSD QTLRVCKRFYVALILS+LVQE PV EVCE FKVARGMVQ L
Sbjct: 1128 HDKFDNRLGITKCSLLSDEQTLRVCKRFYVALILSKLVQEVPVTEVCEAFKVARGMVQGL 1187
Query: 1189 QENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALY 1248
QENAGRFASMVS+FCERLGW DLEGL+AKFQNRVSFGVRAEIVELTTIPYVKGSRARALY
Sbjct: 1188 QENAGRFASMVSLFCERLGWNDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALY 1247
Query: 1249 KAGLRTPLAIAEASISEIVKALFESSSWIAEA---QRRVQLGVAKKIKNGARKIVLEKAE 1305
KAGLRTPLAIAEASI EIVKALFE SSW AE QR VQLGVAKKIKN ARKIVL+KAE
Sbjct: 1248 KAGLRTPLAIAEASIPEIVKALFEFSSWAAEGNSVQRNVQLGVAKKIKNAARKIVLDKAE 1307
Query: 1306 EARIAAFSAFKSLGLNVPQFSRPILSTATENSTGEEEAATTAPRNDKSSSFIFPVPMEHS 1365
EARIAAFSAFKSLGLNVPQFSRP+L A +N + +EAA+T+ +SSF+ M+ S
Sbjct: 1308 EARIAAFSAFKSLGLNVPQFSRPLLLIANDNPS--QEAASTSSGEGATSSFVGTECMK-S 1364
Query: 1366 DKPSLEANQISKKVDLESAGEKLLETSDNELSALVEGGSITELQQKFDAENPPVPFV--G 1423
KP++E ++ S KV E EKL SD L E S +Q KF AENP V +
Sbjct: 1365 GKPAVEGSENSNKVASEIGVEKLKNMSDVILGTAGEVKSTGPIQCKFGAENPAVLSILND 1424
Query: 1424 PGTGGVEFNVNASEIKIPDTTLSVQLGKNAIGTITSNRDLDLEVQDRPNRDPCLVNKDRA 1483
V+ N NA +P + S+ G N GT + D Q R + CL N +A
Sbjct: 1425 ELNSIVDRNENAV---MPLSIKSMNTG-NGNGTSDAYVDHGQHEQQR-GENECLDNNGKA 1479
Query: 1484 CNKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPV 1543
KGPI+A N GGFD FLD W++ EFYFDIH++K SE NS +EIHG+A+CWENSPV
Sbjct: 1480 YEKGPIHATNTPGGFDSFLDLWDSVREFYFDIHFNKQSEVNSLAPYEIHGIAICWENSPV 1539
Query: 1544 YYVNLPKDLWSDHRRKDRFLIYGSSDK--NVLTPEHQLEMIKQRWKRIGEIMEKRDVRKF 1601
YY+NLPKDL RK+ +L SD N+L H+LE K RW ++G+IM K+DVRKF
Sbjct: 1540 YYINLPKDLLCSDERKNIYLTMNVSDDKPNILDANHRLEAAKWRWSKVGKIMGKKDVRKF 1599
Query: 1602 TWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWI 1661
TWN+KVQIQVLK+ AVSIQ+FG LNL ++GLE + +S+L+LSPV++ DG+DMCIV+WI
Sbjct: 1600 TWNLKVQIQVLKNPAVSIQKFGSLNLAMRTMGLELIDNSYLMLSPVYIVDGLDMCIVTWI 1659
Query: 1662 LWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSV 1721
LWPD+ERSSNPNLEKEV+KRLSSEAAAAANRSGRWKNQ RRAAHNGCCRRVAQTRALCSV
Sbjct: 1660 LWPDEERSSNPNLEKEVRKRLSSEAAAAANRSGRWKNQTRRAAHNGCCRRVAQTRALCSV 1719
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
LWKLLVSEEL+E LL IEIPLV +LADME+WGIGVDMEGC+QARN+L KKLR+LEK+AY
Sbjct: 1720 LWKLLVSEELVEVLLRIEIPLVTILADMEVWGIGVDMEGCIQARNVLGKKLRHLEKEAYE 1779
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEH 1841
LAGM FSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR++ +
Sbjct: 1780 LAGMTFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRYKETCFSSC--Y 1837
Query: 1842 RTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFK 1901
T A L+ L S L H+ Q + + CVEH+VEFK
Sbjct: 1838 ITXAXLM---------LGFFSTFLVFLVLPLHYPQLAY---NFFFFLXAMXCVEHVVEFK 1885
Query: 1902 M--SNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGL 1959
M N+D+ N+E DH KINARDFF+PSQENW+LL ADYSQIELRLMAHFS+D +L L
Sbjct: 1886 MIKGNKDVC--NSEADHYKINARDFFVPSQENWLLLTADYSQIELRLMAHFSRDSSLTEL 1943
Query: 1960 LSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAK 2019
LSKPHGDVFTMIAA+WTG+ E VG QER+QTKRL+YGILYGMG NTL++QL CS EA+
Sbjct: 1944 LSKPHGDVFTMIAAKWTGKPESVVGYQEREQTKRLVYGILYGMGANTLAKQLECSLGEAE 2003
Query: 2020 EKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVN 2079
EKI+SF+SSFPGVASWLH AV+ C +KGYV++LKGRKRFLSKIKFG +KEK KA+RQAVN
Sbjct: 2004 EKIRSFRSSFPGVASWLHEAVACCCKKGYVKTLKGRKRFLSKIKFGTSKEKLKARRQAVN 2063
Query: 2080 SICQGSAADIIKIAMINIHSIIVGGVYKPDSS--LAANFQMLKGRCRLLLQVHDELVLEV 2137
SICQGSAADIIKIAMINIHS+I GV +P+SS L A F MLKGRCR++LQVHDELVLEV
Sbjct: 2064 SICQGSAADIIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDELVLEV 2123
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQAD 2182
DPSV+KEA L++ ME++ LLVPLLVK++VG TWGSLEPF A+
Sbjct: 2124 DPSVMKEAGLLLKMTMENSTSLLVPLLVKLKVGRTWGSLEPFHAE 2168
>gi|296081899|emb|CBI20904.3| unnamed protein product [Vitis vinifera]
Length = 2091
Score = 2848 bits (7382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1493/2203 (67%), Positives = 1709/2203 (77%), Gaps = 146/2203 (6%)
Query: 1 MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDG 60
MAS S R RIDQF++SKKRK SP +K+GR EKD+K V+ SPS+KGTLDNYL DD
Sbjct: 1 MASDSIRNRIDQFFSSKKRKPLSPGLKTGRIEKDSKRAVDGSPSSKGTLDNYLVTYPDDN 60
Query: 61 HTSKQSLLSRHEVVKRNLSLEIDKYSKDEKNQALLSDQAQPQATQKV------ISRCSSK 114
T++ S + V KRNL+LEI+ SKDE ALLS Q T+ SR S+
Sbjct: 61 STARGSSAGKGPV-KRNLTLEINLPSKDENENALLSGQLGHGTTEAFGETHTENSRGLSQ 119
Query: 115 EGNSEVGCHMKDGS--AHIPESLELKQFPTDFLSLYCSEIHSSASSPSEAKLKDHKRHSS 172
G VG +KD S AH P + ELKQ DFLSLYCSE SSAS PS K+ +KR S
Sbjct: 120 MGGVGVGEQLKDCSVSAHGPVNSELKQIAADFLSLYCSEFPSSASLPSGLKVNVNKRCGS 179
Query: 173 PSLLGGEDNKIAKKKYCVSNLLQS---GEQTTCSNAKNIEETQSGFIVKTGNLVPNSSQR 229
PSL + N+I+KK++C++N QS GE + C N N E+ Q G IVK
Sbjct: 180 PSLQDVK-NEISKKRHCIANADQSRLEGEDS-CLNENNYEDGQLGLIVKP---------- 227
Query: 230 VTDSNASLLLQASLRKCDKSSKSTLNTTACYTPEPSIVKTYVRETPKSTCGNSIFSPGEA 289
VT N + +Q SLRK ++ KST+N T CYTP P V + ETP S G+S+FSPGE+
Sbjct: 228 VTVGNDATEVQGSLRKSNERLKSTVNMTECYTPGPLTVNAFAHETPNSMRGSSMFSPGES 287
Query: 290 FWNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNEINNSYNLRNKNYN-KSKEMLNEGDS 348
FWNEAI++ADG FA + E I +KS+ E+ NS NLRN K KEML +GD
Sbjct: 288 FWNEAIQVADGLFA------PKTDEQINAAKSEYEMKNSCNLRNAGCGFKLKEMLVDGDC 341
Query: 349 KVQHIKAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFEDKNLKGTKPGCGAADTSEAMMF 408
V+ ++ G S +G V DS ++SPLP+K DFLFE+KNL T P +AD + M
Sbjct: 342 TVEGMEIGVSSGSLGYRVKDS-DQVSPLPVKRFDFLFEEKNLDETNPPHCSADKLDVM-- 398
Query: 409 RDGVVSEKGSVTHKSCQKIKFKCHHDNTSRTEGISDVQEKDSVLIVHERKLDISSQGIDS 468
DG S GSV HK + G+S+V++ +S+ +R++D+ SQ D+
Sbjct: 399 -DGEQSACGSVNHKVLKTTGIT--------NGGMSEVKDMNSIDAEAKREVDLLSQEKDN 449
Query: 469 ITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPW 528
I +DSP I K + + DEA TPSS LKD LDLS WLPSEIC+IY+K+GISKLY W
Sbjct: 450 IKADSPDLGITKSIIACECDEASTPSSFEPLKDSLDLSKWLPSEICNIYRKKGISKLYSW 509
Query: 529 QVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAE 588
QV+CL VDGVLQ+RNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAE
Sbjct: 510 QVDCLKVDGVLQKRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAE 569
Query: 589 HLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVI 648
HLEVLLEPLG+HVRSYYGNQGGG+LPKDTSVAVCTIEKANSL+NR+LEEGRLSEIGIIVI
Sbjct: 570 HLEVLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEIGIIVI 629
Query: 649 DELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSAT 708
DELHMV DQNRGYLLELLLTKLRYAAGEG +S SGE+S
Sbjct: 630 DELHMVGDQNRGYLLELLLTKLRYAAGEGHVESVSGESS--------------------- 668
Query: 709 MPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHI 768
N++ VADWLQAALY+T+FRPVPLEEYIKVGN IY KKMD++RTI A+LGGKDPDHI
Sbjct: 669 --NMSTVADWLQAALYQTDFRPVPLEEYIKVGNTIYDKKMDIIRTISKTADLGGKDPDHI 726
Query: 769 VELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALR 828
VELC+EVVQEGHSVL+FCSSRKGCE TARHVSKFLKKFS N H++ EF+DI+SAIDALR
Sbjct: 727 VELCNEVVQEGHSVLLFCSSRKGCEFTARHVSKFLKKFSTNAHNNTGEFVDISSAIDALR 786
Query: 829 RCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPAR 888
R PAGLDP+LEETLPSGVAYHHAGLTVEER++VETCYRKGL+RVLTATSTLAAGVNLPAR
Sbjct: 787 RSPAGLDPILEETLPSGVAYHHAGLTVEERDIVETCYRKGLLRVLTATSTLAAGVNLPAR 846
Query: 889 RVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPL 948
RVIFRQPRIGRDFIDGTRY+QMAGRAGRTGIDTKGES+LICKPEEVK+I GLLNESCPPL
Sbjct: 847 RVIFRQPRIGRDFIDGTRYKQMAGRAGRTGIDTKGESVLICKPEEVKRICGLLNESCPPL 906
Query: 949 HSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLC 1008
+SCLSEDKNGMTHAILEVVA GIVQTA DI+RYV
Sbjct: 907 YSCLSEDKNGMTHAILEVVASGIVQTANDINRYV-------------------------- 940
Query: 1009 HRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLST 1068
RKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESL+VLDDLSRAREGFVLASDLHLVYL T
Sbjct: 941 -RKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLVVLDDLSRAREGFVLASDLHLVYLVT 999
Query: 1069 PINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGL 1128
PINV+VEPDWEL+YERF++LSALDQSVGN+VGV EP+LMRMAHGAPM S+K R++ KGL
Sbjct: 1000 PINVDVEPDWELFYERFMQLSALDQSVGNRVGVVEPFLMRMAHGAPMCASNKSRNNGKGL 1059
Query: 1129 HGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQAL 1188
H K + RLGIT ++LSD QTLRVCKRFYVALILS+LVQE PV EVCE FKVARGMVQ L
Sbjct: 1060 HDKFDNRLGITKCSLLSDEQTLRVCKRFYVALILSKLVQEVPVTEVCEAFKVARGMVQGL 1119
Query: 1189 QENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALY 1248
QENAGRFASMVS+FCERLGW DLEGL+AKFQNRVSFGVRAEIVELTTIPYVKGSRARALY
Sbjct: 1120 QENAGRFASMVSLFCERLGWNDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALY 1179
Query: 1249 KAGLRTPLAIAEASISEIVKALFESSSWIAEA---QRRVQLGVAKKIKNGARKIVLEKAE 1305
KAGLRTPLAIAEASI EIVKALFE SSW AE QR VQLGVAKKIKN ARKIVL+KAE
Sbjct: 1180 KAGLRTPLAIAEASIPEIVKALFEFSSWAAEGNSVQRNVQLGVAKKIKNAARKIVLDKAE 1239
Query: 1306 EARIAAFSAFKSLGLNVPQFSRPILSTATENSTGEEEAATTAPRNDKSSSFIFPVPMEHS 1365
EARIAAFSAFKSLGLNVPQFSRP+L A +N + +EAA+T+ +SSF+ M+ S
Sbjct: 1240 EARIAAFSAFKSLGLNVPQFSRPLLLIANDNPS--QEAASTSSGEGATSSFVGTECMK-S 1296
Query: 1366 DKPSLEANQISKKVDLESAGEKLLETSDNELSALVEGGSITELQQKFDAENPPVPFVGPG 1425
KP++E ++ S KV E EKL SD L E S +Q KF AENP V
Sbjct: 1297 GKPAVEGSENSNKVASEIGVEKLKNMSDVILGTAGEVKSTGPIQCKFGAENPAV------ 1350
Query: 1426 TGGVEFNVNASEIKIPDTTLSVQLGKNAIGTITSNRDLDLEVQDRPNRDPCLVNKDRACN 1485
LS+ N +L+ + DR N CL N +A
Sbjct: 1351 -------------------LSIL-----------NDELN-SIVDRENE--CLDNNGKAYE 1377
Query: 1486 KGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYY 1545
KGPI+A N GGFD FLD W++ EFYFDIH++K SE NS +EIHG+A+CWENSPVYY
Sbjct: 1378 KGPIHATNTPGGFDSFLDLWDSVREFYFDIHFNKQSEVNSLAPYEIHGIAICWENSPVYY 1437
Query: 1546 VNLPKDLWSDHRRKDRFLIYGSSDK--NVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTW 1603
+NLPKDL RK+ +L SD N+L H+LE K RW ++G+IM K+DVRKFTW
Sbjct: 1438 INLPKDLLCSDERKNIYLTMNVSDDKPNILDANHRLEAAKWRWSKVGKIMGKKDVRKFTW 1497
Query: 1604 NMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILW 1663
N+KVQIQVLK+ AVSIQ+FG LNL ++GLE + +S+L+LSPV++ DG+DMCIV+WILW
Sbjct: 1498 NLKVQIQVLKNPAVSIQKFGSLNLAMRTMGLELIDNSYLMLSPVYIVDGLDMCIVTWILW 1557
Query: 1664 PDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLW 1723
PD+ERSSNPNLEKEV+KRLSSEAAAAANRSGRWKNQ RRAAHNGCCRRVAQTRALCSVLW
Sbjct: 1558 PDEERSSNPNLEKEVRKRLSSEAAAAANRSGRWKNQTRRAAHNGCCRRVAQTRALCSVLW 1617
Query: 1724 KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLA 1783
KLLVSEEL+E LL IEIPLV +LADME+WGIGVDMEGC+QARN+L KKLR+LEK+AY LA
Sbjct: 1618 KLLVSEELVEVLLRIEIPLVTILADMEVWGIGVDMEGCIQARNVLGKKLRHLEKEAYELA 1677
Query: 1784 GMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRT 1843
GM FSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI+PVIKEHRT
Sbjct: 1678 GMTFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIIPVIKEHRT 1737
Query: 1844 LAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM- 1902
LAKLLNCTLGSICSLAR+S+ TQ+YTLHGHWLQTSTATGRLSMEEPNLQCVEH+VEFKM
Sbjct: 1738 LAKLLNCTLGSICSLARLSLQTQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHVVEFKMI 1797
Query: 1903 -SNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLS 1961
N+D+ N+E DH KINARDFF+PSQENW+LL ADYSQIELRLMAHFS+D +L LLS
Sbjct: 1798 KGNKDVC--NSEADHYKINARDFFVPSQENWLLLTADYSQIELRLMAHFSRDSSLTELLS 1855
Query: 1962 KPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEK 2021
KPHGDVFTMIAA+WTG+ E VG QER+QTKRL+YGILYGMG NTL++QL CS EA+EK
Sbjct: 1856 KPHGDVFTMIAAKWTGKPESVVGYQEREQTKRLVYGILYGMGANTLAKQLECSLGEAEEK 1915
Query: 2022 IKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSI 2081
I+SF+SSFPGVASWLH AV+ C +KGYV++LKGRKRFLSKIKFG +KEK KA+RQAVNSI
Sbjct: 1916 IRSFRSSFPGVASWLHEAVACCCKKGYVKTLKGRKRFLSKIKFGTSKEKLKARRQAVNSI 1975
Query: 2082 CQGSAADIIKIAMINIHSIIVGGVYKPDSS--LAANFQMLKGRCRLLLQVHDELVLEVDP 2139
CQGSAADIIKIAMINIHS+I GV +P+SS L A F MLKGRCR++LQVHDELVLEVDP
Sbjct: 1976 CQGSAADIIKIAMINIHSVIAEGVDEPNSSTELPAKFHMLKGRCRIILQVHDELVLEVDP 2035
Query: 2140 SVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQAD 2182
SV+KEA L++ ME++ LLVPLLVK++VG TWGSLEPF A+
Sbjct: 2036 SVMKEAGLLLKMTMENSTSLLVPLLVKLKVGRTWGSLEPFHAE 2078
>gi|255551068|ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
gi|223544402|gb|EEF45923.1| DNA polymerase theta, putative [Ricinus communis]
Length = 2154
Score = 2768 bits (7176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1451/2181 (66%), Positives = 1701/2181 (77%), Gaps = 90/2181 (4%)
Query: 1 MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDG 60
M S S R RI+QF+ASKKRK+ SP +K G EK+A IT + SP+AKGTLDNYL NSQD
Sbjct: 1 MESDSSRIRINQFFASKKRKALSPGLKYG-IEKEATITSDGSPNAKGTLDNYLVNSQDQN 59
Query: 61 HTSKQSLLSRHEVVKRNLSLEIDKYSKDEK----NQALLSDQAQPQA--TQKVISRCSSK 114
+ LLSR + VKRNL+LEI++ SKDEK + A L Q A +K S+ S
Sbjct: 60 ----RGLLSRQDSVKRNLALEINELSKDEKMDPCSVAKLDSQNSEGAGTIKKETSQGSCN 115
Query: 115 EGNSEV-GCHMKDGSAHIPESLELKQFPTDFLSLYCSEIHSSASSPSEAKLKDHKRHSSP 173
G+ V GC + SA ES ELKQF DFLSLYCSE+ S+A+SPS+ KL DHKRH SP
Sbjct: 116 AGHVAVEGCSVPRQSA---ESSELKQFANDFLSLYCSELQSTATSPSKPKLNDHKRHGSP 172
Query: 174 SLLGGEDNKIAKKKYC---VSNLLQSGEQTTCSNAKNIEETQSGFIVKTGNLVPNSSQRV 230
L+ D K +KK++C S L GE T K E QS I + + S+
Sbjct: 173 LLVDDRD-KTSKKRHCDCVTSQSLSEGE-TAFFFEKKAENKQSAIIATAEMPLYHVSREA 230
Query: 231 TDSNASLLLQASLRKCDKSSKSTLNTTACYTPEPSIVKTYVRETPKSTCGNSIFSPGEAF 290
T N + LQASLRKC++ S+ C TP SIVK+ VRETP+S G+S+FSPGEAF
Sbjct: 231 TVVNDPIKLQASLRKCNRVSRLPAGMAECSTPGSSIVKSLVRETPRSARGSSMFSPGEAF 290
Query: 291 WNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNEINNSYNLRNKNYNKSKEMLNEGDSKV 350
WNEAI+IADG F+ + +A G D ++ +KS++ML+E S++
Sbjct: 291 WNEAIQIADGLFSEAG---NPLALGADDVNKES-----------CSDKSRQMLDESGSRI 336
Query: 351 QHIKAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFEDKNLKGTKPGCGAADTSEAMMFRD 410
Q + SL+ + DS+K+ S LP+K+LD LF+DKNL T P A D+ M +
Sbjct: 337 QQMANSCSLELFRAHMRDSIKKSSTLPVKNLDLLFQDKNLDTTSPFRTADDSD---MLKG 393
Query: 411 GVVSEKGSVTHKSCQKIKFKCHHDNTSRTEGISDVQEKDSVLIVHERKLDISSQGIDSIT 470
G SE GSV K + K ++ ++ E + DVQ+ +S+ + +R+ D+ Q DSI
Sbjct: 394 GEQSECGSVNIKCIRTGKIATCNEVQTKEE-MHDVQKTESIYAMTKREADLLLQYTDSIM 452
Query: 471 SDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQV 530
+SP N I+ PV + EA TPSS LKD LDL +WLP+E+CSIYK+RGISKLYPWQV
Sbjct: 453 PNSPINEIRNPVASAYG-EADTPSSFVPLKDRLDLVNWLPAEVCSIYKRRGISKLYPWQV 511
Query: 531 ECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHL 590
+CL VDGVLQRRNLVYCASTSAGKSFVAEILMLRR+IST K+A LVLPYVSICAEKAE+L
Sbjct: 512 DCLQVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVISTRKIAFLVLPYVSICAEKAEYL 571
Query: 591 EVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDE 650
E LLEPLG+HVRSYYGNQGGG LPKDTSVAVCTIEKANSL+NR+LEEGRLSEIGIIVIDE
Sbjct: 572 EGLLEPLGKHVRSYYGNQGGGILPKDTSVAVCTIEKANSLINRLLEEGRLSEIGIIVIDE 631
Query: 651 LHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMP 710
LHMV DQNRGYLLEL+LTKLRYAAGEG S+S+SGE+SGTSS K DPAHGLQIVGMSATMP
Sbjct: 632 LHMVGDQNRGYLLELMLTKLRYAAGEGNSESTSGESSGTSS-KGDPAHGLQIVGMSATMP 690
Query: 711 NVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVE 770
NVAAVADWLQAA Y+TNFRPVPLEE+IKVGN IY KKMD+VRTI AA LGGKDPDHIVE
Sbjct: 691 NVAAVADWLQAAFYQTNFRPVPLEEFIKVGNTIYDKKMDIVRTIPRAAELGGKDPDHIVE 750
Query: 771 LCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRC 830
LC+EVVQ+GHSVLIFCSSRKGCESTA+HVSKFLKKFS+NV + +SEF+DI SA++ALRR
Sbjct: 751 LCNEVVQDGHSVLIFCSSRKGCESTAKHVSKFLKKFSVNVQN-NSEFLDIASAVEALRRS 809
Query: 831 PAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRV 890
P GLDP+LEETLPSGVAYHHAGLTVEERE++E+CYR+GL+RVLTATSTLAAGVNLPARRV
Sbjct: 810 PVGLDPILEETLPSGVAYHHAGLTVEEREIIESCYRRGLLRVLTATSTLAAGVNLPARRV 869
Query: 891 IFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHS 950
IFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGES+LICKP+E+K+IMGLLNE+CPPL S
Sbjct: 870 IFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESILICKPDELKRIMGLLNENCPPLQS 929
Query: 951 CLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHR 1010
CLSEDKNGMTHAILEVVAGGIVQTA DIHRYVRCTLLNSTKPF+DVVKSAQDSLRWLCHR
Sbjct: 930 CLSEDKNGMTHAILEVVAGGIVQTANDIHRYVRCTLLNSTKPFRDVVKSAQDSLRWLCHR 989
Query: 1011 KFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI 1070
KFL+W +DTKLYSTTPLGRAAFGSSLCPEESLIVLD+LSRAREGFVLASDLHLVYL+TPI
Sbjct: 990 KFLDWCDDTKLYSTTPLGRAAFGSSLCPEESLIVLDELSRAREGFVLASDLHLVYLATPI 1049
Query: 1071 NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHG 1130
NVEVEPDWELYYERF+ELS LD+SVGN+VGVSEP+LMRMAHGAPMR+ ++ D+ KGL G
Sbjct: 1050 NVEVEPDWELYYERFMELSPLDKSVGNRVGVSEPFLMRMAHGAPMRMLNRSTDNMKGLPG 1109
Query: 1131 KLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQE 1190
KLE + G + N+++SD Q+LRVC+RFYVALILSRLVQETPV EVCE FKVARGMVQALQE
Sbjct: 1110 KLENQHGKSKNSIISDEQSLRVCRRFYVALILSRLVQETPVAEVCEAFKVARGMVQALQE 1169
Query: 1191 NAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKA 1250
N+GRFASMVS+FCERLGW+D+EGL++KFQ+RVSFGVRAEIVELTTIPYVKGSRARALYKA
Sbjct: 1170 NSGRFASMVSLFCERLGWHDVEGLVSKFQSRVSFGVRAEIVELTTIPYVKGSRARALYKA 1229
Query: 1251 GLRTPLAIAEASISEIVKALFESSSWIAE---AQRRVQLGVAKKIKNGARKIVLEKAEEA 1307
GLRTPLAIAEAS+SEIVKA+FESSSW A+ AQRR+QLGVAKKIKNGARKIVLEKAEEA
Sbjct: 1230 GLRTPLAIAEASVSEIVKAIFESSSWTAQEGSAQRRLQLGVAKKIKNGARKIVLEKAEEA 1289
Query: 1308 RIAAFSAFKSLGLNVPQFSRPIL-STATENSTGEEEAATTAPRNDKSSSFIFPVPMEHSD 1366
R+AAFSAFKSLGL++PQFSRP+L +T+ +N+ E+ A + D +++ I V +E +D
Sbjct: 1290 RVAAFSAFKSLGLDIPQFSRPLLMNTSVDNA---EKHAASNLSEDGTTNVI--VSLEQTD 1344
Query: 1367 KPS----LEANQISKKVDLESAGEKLLETSDNELSALVEGGSITELQQKFDAENPPVPFV 1422
S +E ++ +V LES G+KL++T D L A E S +Q AEN V
Sbjct: 1345 HTSYDLCIEGSKKPAEVTLESEGDKLIKTIDVVLEASAETNSTGLVQSNIGAENSKVVDR 1404
Query: 1423 GPGTGGVEFNVNASEIKIPDTTLSVQLGKNAIGTITSNRDLDLEVQDRPNRDPCLV-NKD 1481
G N NA+ + + LSV+ ++ GT T R++ EV ++ +R N +
Sbjct: 1405 KSLPTG---NHNANAVVV----LSVESEQDGDGTGTHQRNILREVHEQCSRQNLSSDNME 1457
Query: 1482 RACNKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENS 1541
AC KGPI A N SGG D FL W+A EFYFD+HY+K SE NS +EIHG+A+CWENS
Sbjct: 1458 NACEKGPIKASNISGGLDSFLVLWDAAQEFYFDLHYNKRSEVNSVAPYEIHGMAICWENS 1517
Query: 1542 PVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKF 1601
P+YYVNLPKD L+ + K VL PE+ LE+++ RW RIG+IM KR+V KF
Sbjct: 1518 PIYYVNLPKD-----------LLCPDNQKYVLRPENWLEIVRHRWNRIGKIMGKREVIKF 1566
Query: 1602 TWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWI 1661
TWN+K+QIQVLK+A VSI RFG NL G L LE + SS L L +++ +GIDMCIV+WI
Sbjct: 1567 TWNLKIQIQVLKNAVVSIHRFGSTNLSGKDLDLELIDSSHLPLPQINVTEGIDMCIVAWI 1626
Query: 1662 LWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSV 1721
LWPD+ERSSNPNLEKEVK+RL ++A AAANR+GRWKNQMRRAAHNGCCRRVAQTRALCSV
Sbjct: 1627 LWPDEERSSNPNLEKEVKRRLPTQAVAAANRNGRWKNQMRRAAHNGCCRRVAQTRALCSV 1686
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
LWKLL+SE L+EAL IE+PLVNVLADMELWGIGVDME CL+ARN+L KKLR+LEKKAY
Sbjct: 1687 LWKLLISEGLVEALKKIEMPLVNVLADMELWGIGVDMEACLRARNVLGKKLRHLEKKAYE 1746
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEH 1841
LAGM FSLYTAADIANVLYG LKLPIPEGH KGK HPSTDKHCLDLLR K++
Sbjct: 1747 LAGMTFSLYTAADIANVLYGRLKLPIPEGHGKGKLHPSTDKHCLDLLR---------KKY 1797
Query: 1842 RTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFK 1901
A + T+ + + M + W+ R ++ +QCVEHMVEFK
Sbjct: 1798 CCFAFMFYATIAA--LKLGLLMLFFLILMILIWVSEIKVLLRTNLGV--MQCVEHMVEFK 1853
Query: 1902 MSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLS 1961
+S D GG+AE ++ KINAR+FFIP+QENW+LL ADYSQIELRLMAHFSKD +LI LLS
Sbjct: 1854 IS-MDKNGGDAEANNYKINAREFFIPTQENWLLLTADYSQIELRLMAHFSKDASLIELLS 1912
Query: 1962 KPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEK 2021
KPHGDVFT+IAARWTG++E+SV S ERDQTKRL+YGILYGMG NTL++QL CSS+EA EK
Sbjct: 1913 KPHGDVFTIIAARWTGKAEESVASLERDQTKRLVYGILYGMGANTLAQQLECSSDEAAEK 1972
Query: 2022 IKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSI 2081
IKSFKS FPGVASWLH AV+SC + GYVE+LKGRKRFLSKIKFGN+KEKSKAQRQAVNSI
Sbjct: 1973 IKSFKSCFPGVASWLHEAVASCRKNGYVETLKGRKRFLSKIKFGNSKEKSKAQRQAVNSI 2032
Query: 2082 CQGSAADIIKIAMINIHSII--VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDP 2139
CQGSAAD+IKIAMINI+S+I V G P SSLA F MLKGRCR+LLQVHDELVLEVDP
Sbjct: 2033 CQGSAADLIKIAMINIYSVIARVDGP-DPSSSLATKFHMLKGRCRILLQVHDELVLEVDP 2091
Query: 2140 SVIKEAVSLVQKCMESAALLL 2160
VIKEA SL+Q ME+AA LL
Sbjct: 2092 PVIKEAASLLQAGMENAASLL 2112
>gi|356554501|ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
Length = 2147
Score = 2715 bits (7037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1418/2204 (64%), Positives = 1663/2204 (75%), Gaps = 82/2204 (3%)
Query: 1 MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDG 60
MAS S R+RIDQFYASKKRK+ SP K+GR EK A+ + SPSAKGTL+ YL +SQD
Sbjct: 1 MASPSHRSRIDQFYASKKRKAASPVPKAGRFEKGARHGADESPSAKGTLEGYLVSSQD-- 58
Query: 61 HTSKQSLLSRHEVVKRNLSLEIDKYSKDEKNQALLSDQAQPQATQKVISRCSSKEGNSEV 120
+ VKRNL+ EI +E N+ +S +Q + SE+
Sbjct: 59 GGGDGCGDANTVKVKRNLTSEIGGSLDNELNKHTVSLGQGCGDSQSIQP--------SEI 110
Query: 121 GCHMKDGSAHIPESLELKQFPTDFLSLYCSEIHSSASSPSEAKLKDHKRHSSPSLLGGED 180
G G A E KQF DFLSLYCS +H S P E K+ DHKRH SP+L+ G
Sbjct: 111 G----QGVAKS----ERKQFAADFLSLYCSVLHPSVGLPLEMKMDDHKRHGSPTLVEGNS 162
Query: 181 NKIAKKKYCVSNLLQSGEQTTCSNAKNIEETQSGFIVKTGNL--VPNSSQRVTDSNASLL 238
+ K L GE T S K E+ +SG + ++ VP S +V+ +
Sbjct: 163 VLLRKNNDTAGELCFGGENTLLS-VKIDEDIKSGVVGNNNSMGCVPGSCTKVSGGGDTTG 221
Query: 239 LQASLRKCDKSSKSTLNTTACY-TPEPSIVKTYVRETPKSTCGNSIFSPGEAFWNEAIEI 297
+ RKC+ + K ++ Y TP IVK VRETPKST G+S FSPGEAFWNEAI++
Sbjct: 222 FETGFRKCNNTPKPSMKLAEYYNTPGSLIVKASVRETPKSTRGSSSFSPGEAFWNEAIQL 281
Query: 298 ADGFFAHTDIGPSQIAEGIADSKSQNEINNSYNLRNKNYNKSKEMLNEGDSKVQHIKAGG 357
ADG PS++ + + E+ NS NL+N + K +++L++ +++++ + G
Sbjct: 282 ADGLCVPMGNDPSKVMGESNVVEEEPEMKNSCNLQNYD-GKPRKILDQSKNRIRNREMGA 340
Query: 358 SLKQMGKDVIDSVKELSPLPIKHLDFLFEDKNLK-GTKPGCGAADTSEAMMFRDGVVSEK 416
L +G DSVKE S LP+KH DF FED NL+ T C D+ V+
Sbjct: 341 PLGLVGMHTKDSVKEASSLPVKHFDFSFEDNNLEENTLQDCRVGDSIN--------VTCV 392
Query: 417 GSVTHKSCQKIKFKCHHDNTSRTEGISDVQEKDSVLIVHERKLDISSQGIDSITSDSPTN 476
+ SC I E +++VQE V + +R Q S+TS+SP N
Sbjct: 393 AGKQYDSCSMIGHT--------YEKMNEVQENTLVDTLGKR----VCQDNVSMTSNSPHN 440
Query: 477 VIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVD 536
++ P+ SDEA TPS+S L D DL+SWLP EICSIY+K+GIS+LY WQV+CL VD
Sbjct: 441 EVRTPISAHASDEASTPSTSVSLNDHFDLNSWLPPEICSIYRKKGISRLYSWQVDCLRVD 500
Query: 537 GVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEP 596
GVLQRRNLVYCASTSAGKSFVAEILMLRR+I TGKMALLVLPYVSICAEKAEHLE LL+P
Sbjct: 501 GVLQRRNLVYCASTSAGKSFVAEILMLRRVIITGKMALLVLPYVSICAEKAEHLERLLDP 560
Query: 597 LGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVAD 656
LG+HVRSYYGNQGGG+LPKDTSVAVCTIEKANSLVNR+LEEGRLSE+GIIVIDELHMV D
Sbjct: 561 LGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLVNRLLEEGRLSEMGIIVIDELHMVGD 620
Query: 657 QNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVA 716
RGYLLEL+LTKLRYAAGEG SS GE+SG SS KADPA GLQIVGMSATMPNVAAVA
Sbjct: 621 PRRGYLLELMLTKLRYAAGEGIPKSSDGESSGGSSDKADPAQGLQIVGMSATMPNVAAVA 680
Query: 717 DWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVV 776
DWLQAALY+T FRPVPLEEYIKVGN+IY+K M++ R I AA LGGKDPDH+VELC+EVV
Sbjct: 681 DWLQAALYQTEFRPVPLEEYIKVGNSIYNKSMELCRIISKAAELGGKDPDHVVELCNEVV 740
Query: 777 QEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDP 836
QEGHSVLIFCSSRKGCESTARH++KFLK F+++ ++D EF DITSAI++L +CPAGLDP
Sbjct: 741 QEGHSVLIFCSSRKGCESTARHIAKFLKSFTVD--ANDCEFADITSAINSLGKCPAGLDP 798
Query: 837 VLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPR 896
+L+ETLPSGVA+HHAGLTVEERE+VETCYRKGL+RVLTATSTLAAGVNLPARRVIFRQPR
Sbjct: 799 ILQETLPSGVAFHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPR 858
Query: 897 IGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK 956
IG DF+DGTRY+QMAGRAGRTGIDTKGES+LICKPEE+KK+ GLLNESCPPLHSCLSED
Sbjct: 859 IGCDFLDGTRYKQMAGRAGRTGIDTKGESILICKPEELKKVSGLLNESCPPLHSCLSEDM 918
Query: 957 NGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWN 1016
NGMTHAILEVVAGGIVQTA DI+RYVRCTLLNSTKPF DVVKSAQ+SLRWLC RKFLEWN
Sbjct: 919 NGMTHAILEVVAGGIVQTASDINRYVRCTLLNSTKPFLDVVKSAQESLRWLCQRKFLEWN 978
Query: 1017 EDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEP 1076
EDTKLYSTTPLGRA+FGSSLCP+ESLIVL DLSRAREGFVLASDLHLVYL TPINV+VEP
Sbjct: 979 EDTKLYSTTPLGRASFGSSLCPQESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEP 1038
Query: 1077 DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
DWELYYE F++LS LDQSVGN+VGV+EP+LM MAHGAP+R S+K RD+T+ LH + +L
Sbjct: 1039 DWELYYEHFVKLSLLDQSVGNRVGVTEPFLMYMAHGAPLRASNKSRDNTRSLHNQRRNQL 1098
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
GI+S D QTLRVC+RFYVALILS LVQE PV EVCE FKVARGMVQALQENAGRFA
Sbjct: 1099 GISSATANYDDQTLRVCRRFYVALILSLLVQEIPVGEVCEAFKVARGMVQALQENAGRFA 1158
Query: 1197 SMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPL 1256
SMV+VFCERLGW+DLEGL+AKFQNRVSFGVRAEIVELTTIPYVKGSRAR+LYKAGLRTP
Sbjct: 1159 SMVAVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARSLYKAGLRTPH 1218
Query: 1257 AIAEASISEIVKALFESSSWIAE--AQRRVQLGVAKKIKNGARKIVLEKAEEARIAAFSA 1314
AIAEASI EIVKALFESSSW E AQR Q G+AKKIKNGARKIV +KAEEA AAFSA
Sbjct: 1219 AIAEASIPEIVKALFESSSWATEGSAQRGFQFGIAKKIKNGARKIVFDKAEEASNAAFSA 1278
Query: 1315 FKSLGLNVPQFSRPILSTATENS----TGEEEAATTAPRNDKSSSFIFPVPMEHSDKPSL 1370
FKSLG NVPQF ILSTA +S TG + T D S SF+ +++++K +L
Sbjct: 1279 FKSLGFNVPQFDPQILSTAARDSIRLGTGSTSGSDT---TDTSHSFVNADCIDNTNKFTL 1335
Query: 1371 EANQISKKVDLESAGEKLLETSDNELSALVEGGSITELQQKFDAENPPVPFVGPGTGGVE 1430
+ + E L++ S N A VEG S + + + VP GP E
Sbjct: 1336 DKEK-----------EDLIKLSVNGTVASVEGKSRSRMICSLSS----VPVAGPKMD--E 1378
Query: 1431 FNVNASEIKIPDTT-LSVQLGK-NAIGTITSNRDLDLEVQDRPNRDPCLVNKDRACNKGP 1488
N + K D T LSVQL K N + D + N + N + KGP
Sbjct: 1379 LNRTSDHTKNADMTILSVQLQKPNDKSGVHDGCDAHCTEEAHKNGNLASGNAGSSSQKGP 1438
Query: 1489 INAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNL 1548
INA+++ GG D FLD W++ EFYFDIHY K E +S FEIHG+AVCWENS VYY+NL
Sbjct: 1439 INAVSSPGGLDSFLDLWDSMPEFYFDIHYIKRLELHSTAPFEIHGIAVCWENSSVYYINL 1498
Query: 1549 PKDLWSDHRRKDRFLIYGS----SDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWN 1604
P+D+ KD L + + + LE+ + RW RI +I+ K +VRKFTWN
Sbjct: 1499 PRDILLSDSIKDGCLSLSACSHKKKVSSSNSKQDLEIARSRWNRISKIIGKINVRKFTWN 1558
Query: 1605 MKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWP 1664
+K+Q+QVLK A S+QRFG L+ +G S+ LE V +S++LL P+H+KD IDMCIV+WILWP
Sbjct: 1559 LKIQMQVLKRPAFSVQRFGCLDTLGKSMDLEVVDNSYVLLPPIHVKDAIDMCIVAWILWP 1618
Query: 1665 DDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWK 1724
D+E SS+PNL+KEVKKRLSSE AA AN+SGRW+NQMRRAAHNGCCRRVAQ RAL SVLWK
Sbjct: 1619 DEESSSSPNLDKEVKKRLSSEDAAVANQSGRWRNQMRRAAHNGCCRRVAQIRALSSVLWK 1678
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LLVSE+L+E L++IEIPLVNV+ADMELWGIGVD+E C+QAR LL K+L++LEK+AY LAG
Sbjct: 1679 LLVSEKLVEVLMDIEIPLVNVVADMELWGIGVDLERCIQARKLLIKRLKHLEKEAYKLAG 1738
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTL 1844
FSL ADIA VLY HLKLPIP+ NKGKQHPST KHCLD LRHEHPIVPVIKEHRT+
Sbjct: 1739 TTFSLNMPADIARVLYEHLKLPIPDVRNKGKQHPSTSKHCLDALRHEHPIVPVIKEHRTM 1798
Query: 1845 AKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN 1904
AKLLN TLGSICSLAR+S+STQKYTLHGHWLQTSTATGRLSMEEPNLQCVEH VEFKM +
Sbjct: 1799 AKLLNSTLGSICSLARLSVSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVEFKMKD 1858
Query: 1905 EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
E+ G+A+ +C INARDFF+P+Q+NW+LL ADYSQIELRLMAHFSKD +L+ LLSKP
Sbjct: 1859 EN--EGDADESYCTINARDFFVPTQDNWLLLTADYSQIELRLMAHFSKDSSLVELLSKPD 1916
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
GDVFTMIAARWTG E SV S+ER+QTKR++YGILYGMG N+L+EQL+C+S+EA EKI +
Sbjct: 1917 GDVFTMIAARWTGCPEVSVCSKEREQTKRMVYGILYGMGVNSLAEQLDCTSDEAAEKIAN 1976
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
FKSSFPGV+SWL AV+SC KGYVE+LKGRKRFLSKIK+G++ EKSKAQRQAVNSICQG
Sbjct: 1977 FKSSFPGVSSWLLEAVASCRSKGYVETLKGRKRFLSKIKYGSSTEKSKAQRQAVNSICQG 2036
Query: 2085 SAADIIKIAMINIHSIIVGGVYKPD--SSLAANFQMLKGRCRLLLQVHDELVLEVDPSVI 2142
SAADIIKIAM+ I+S IV G PD SSLA F MLK RCR+LLQVHDEL+LEVDPSVI
Sbjct: 2037 SAADIIKIAMLRIYSAIVTGFDSPDSSSSLATKFHMLKDRCRILLQVHDELMLEVDPSVI 2096
Query: 2143 KEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQADNYTN 2186
KEA L+Q ME+A LLVPL VK++VG TWGSLEP+ +D + N
Sbjct: 2097 KEAALLLQTSMENAVSLLVPLHVKLKVGRTWGSLEPYTSDKFNN 2140
>gi|449442230|ref|XP_004138885.1| PREDICTED: DNA polymerase theta-like [Cucumis sativus]
Length = 2144
Score = 2686 bits (6963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1425/2214 (64%), Positives = 1673/2214 (75%), Gaps = 109/2214 (4%)
Query: 1 MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDG 60
MASGSP +RIDQFYASKKRK +PS+KSG +K+ K +E SP AKGTLDNYL SQD G
Sbjct: 1 MASGSPPSRIDQFYASKKRKPLTPSLKSGSYDKNGKKALEGSPGAKGTLDNYLVISQDHG 60
Query: 61 ------HTSKQSLLSRHEVVKRNLSLEIDKYSKDEKNQALLSDQAQPQAT-QKVISRCSS 113
H+ +++L S +VKRNL L+I+ ++E + S + T + SS
Sbjct: 61 SSDNPSHSVRENL-SAQNLVKRNLLLKINSSFRNEHGETTSSRGCDKKRTLEDSFETRSS 119
Query: 114 KEGNSEVGCHMKDGSAHIPESLELKQFPTDFLSLYCS-EIHSSASSPSEAKLKDHKRHSS 172
++ C G E ELKQF DFLSLYCS E+ ++ SSP E K+ KRHSS
Sbjct: 120 TVKSTASDC----GITPCTEKPELKQFAADFLSLYCSNELQTTVSSPVEQKVTFLKRHSS 175
Query: 173 PSLLGGEDNKIAKKKYCVSNLLQSGEQTTCSNAKNIEETQSGFIVKTGNLVPNSSQRVTD 232
PS L GE K+ KK + + + + SNA + +S F+V+TG+ V
Sbjct: 176 PSHLEGE-AKLPKKMHSIVGPSNAESEPDSSNALSEGNKESNFVVETGDTV--------- 225
Query: 233 SNASLLLQASLRKCDKSSKSTLNTTACYTPEPSIVKTYVRETPKSTCGNSIFSPGEAFWN 292
S+ +L+A ++KC+++ S T C TP S T++R+TPKS G+S FSPGEAFW
Sbjct: 226 SHHPAVLKACMQKCNQAPTSPYCLTECKTPGLSTGTTFIRQTPKS--GSSTFSPGEAFWK 283
Query: 293 EAIEIADGFFAHTDIGPSQIAEGIADSKSQNEI---NNSYNLRNKNYNKSKEMLNEGDSK 349
EAI +ADG A PS IA D++ N + +N+ L K + +
Sbjct: 284 EAIVLADGLRA-----PS-IALINCDAEEANLVESQSNTKKLPIPEEPAQKRLKGQFGGG 337
Query: 350 VQHIKAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFEDKNLKGTKPGCGAADTSEAMMFR 409
++ G + D+ + + +S LP+KH DF +DKNL + C A++ S+ +
Sbjct: 338 SGGVRLGEPGASLRSDLKELDRVVSSLPVKHFDFSADDKNLDDSTSPCCASNESKVNAYD 397
Query: 410 DGVVSEKGSVTHKSCQKIKFKCHHDNTSRTEGISDVQEKDSVLIVHERKLDISSQGIDSI 469
S++ TH S K K ++ E I + SV +V+E KL+I S DSI
Sbjct: 398 LNEQSDRCYTTHISLPKHNDKTRDSDSLTKEKIQETIVTSSVPVVNEVKLNIFSPS-DSI 456
Query: 470 TSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQ 529
TSD+ + ++ ++ DE TPSSS KD LDLS WLP EI SIYK++GI+KL+PWQ
Sbjct: 457 TSDTAAHELRASTIHDSRDET-TPSSSTRHKDWLDLSCWLPPEISSIYKEKGITKLHPWQ 515
Query: 530 VECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEH 589
VECL VDGVLQRRNLVYCASTSAGKSFVAEILMLRR+ISTGKMALLVLPYVSICAEKA H
Sbjct: 516 VECLKVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVISTGKMALLVLPYVSICAEKAAH 575
Query: 590 LEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVID 649
L+VLLE LG+HVRSYYGNQGGG+LPKDTSVAVCTIEKANSL+NR+LEE RLSEIGIIVID
Sbjct: 576 LDVLLESLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEECRLSEIGIIVID 635
Query: 650 ELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATM 709
ELHMV DQ RGYLLELLLTKLRYAAGEG DSSSGE+SGTSSGK+DPAHG+QIVGMSATM
Sbjct: 636 ELHMVGDQTRGYLLELLLTKLRYAAGEGNLDSSSGESSGTSSGKSDPAHGIQIVGMSATM 695
Query: 710 PNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIV 769
PNVAAVADWLQAALY T+FRPVPLEEYIKVGN IY+K +D+VRTI ANLGG+DPDHIV
Sbjct: 696 PNVAAVADWLQAALYHTDFRPVPLEEYIKVGNTIYNKSLDIVRTISKTANLGGRDPDHIV 755
Query: 770 ELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRR 829
ELC+EVV++GHSVLIFCSSRKGCESTA+HVSKFLKKFS+ + + +SEF DI SAIDALRR
Sbjct: 756 ELCNEVVEDGHSVLIFCSSRKGCESTAKHVSKFLKKFSVKIQNDNSEFTDIFSAIDALRR 815
Query: 830 CPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARR 889
CP+GLDPVLEET PSGVAYHHAGLTVEEREVVETCYRKGL+RVLTATSTLAAGVNLPARR
Sbjct: 816 CPSGLDPVLEETFPSGVAYHHAGLTVEEREVVETCYRKGLLRVLTATSTLAAGVNLPARR 875
Query: 890 VIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLH 949
VIFRQPRIGRDFIDG RYRQMAGRAGRTGIDTKGES+LIC+PEEVK+I LLNESCPPL
Sbjct: 876 VIFRQPRIGRDFIDGARYRQMAGRAGRTGIDTKGESVLICRPEEVKRINELLNESCPPLQ 935
Query: 950 SCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCH 1009
SCLSEDKNGMTHAILEVVAGGIVQTA DIHRYVRCTLLNSTKPFQDVVKSAQ+SLRWLCH
Sbjct: 936 SCLSEDKNGMTHAILEVVAGGIVQTATDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCH 995
Query: 1010 RKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTP 1069
KFLEWN DTKLYSTTPLGRA+FGSSL PEESLIVLDDLSRAREGFVLASDLHLVYL TP
Sbjct: 996 GKFLEWNGDTKLYSTTPLGRASFGSSLSPEESLIVLDDLSRAREGFVLASDLHLVYLVTP 1055
Query: 1070 INVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLH 1129
INV+VEPDWELYYE F+ LS+LDQSVGN+VG +EP+LMRMAHGAP+R ++ R+ GL
Sbjct: 1056 INVDVEPDWELYYELFMGLSSLDQSVGNRVGATEPFLMRMAHGAPVRRANISRNGVAGLR 1115
Query: 1130 GKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQ 1189
K + +G+ + S+ QT+RVCKRFYVALILSRLVQETP+ EVC+ FKVARGMVQALQ
Sbjct: 1116 TKRDEHVGVYGDRP-SEEQTIRVCKRFYVALILSRLVQETPIPEVCDAFKVARGMVQALQ 1174
Query: 1190 ENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYK 1249
E+AGRFASMVSVFCERLGW+DLEGL+AKFQNRVSFGVRAEIVELTTIPYVKGSRARALYK
Sbjct: 1175 ESAGRFASMVSVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYK 1234
Query: 1250 AGLRTPLAIAEASISEIVKALFESSSWIAE--------AQRRVQLGVAKKIKNGARKIVL 1301
AGLRTPLAIAEAS +E+VKAL ES+SW E AQ+R+ +G+A+KIK+GARK+VL
Sbjct: 1235 AGLRTPLAIAEASDAELVKALSESASWTTEGERCDYFTAQKRMHVGLARKIKHGARKVVL 1294
Query: 1302 EKAEEARIAAFSAFKSLGLNVPQFSRPILSTATENSTGEEEAATTAPRNDKSSSFIFPVP 1361
+KAEEARIAAFSAFKSLG VPQ S P+ ++A N T + T
Sbjct: 1295 DKAEEARIAAFSAFKSLGFTVPQISHPLSASADGNITAQVAVGTQ--------------- 1339
Query: 1362 MEHSDKPSLEANQISKKVDLESAGEKLLETSDNELSALVEGGSITELQQKFDAENPPVPF 1421
+E V S+ EK++ + ++ A+ +++Q NPP
Sbjct: 1340 -------QMERVLTLSCVGGTSSSEKVVGKNPSQTGAIS-----IDVKQSNSGVNPP--- 1384
Query: 1422 VGPGTGGVEFNVNASEIKIPDTTLSVQLGKNAIGTITSN--RDLDLEVQDRPNRDPCL-- 1477
VNA I D+ + I+S+ R D + Q + L
Sbjct: 1385 -----------VNAEGSAIQDSNTVGECAGKVDVAISSHLERITDKDAQREQHSSKVLHS 1433
Query: 1478 VNKDRACNKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVC 1537
+ +D + KGPI A + SGGF+ FL+ W+A+ EFYFD++Y K SE NS V FE+HG+A+C
Sbjct: 1434 LKRDGSSMKGPIQAASTSGGFESFLNLWDASQEFYFDLYYTKRSEVNSVVPFELHGIAIC 1493
Query: 1538 WENSPVYYVNLPKDLWSDHRRK----DRFLIYGSSDK-NVLTPEHQLEMIKQRWKRIGEI 1592
WE SPVYYVN+PKDL K D + S D+ +V EH EMI+ RWK+I EI
Sbjct: 1494 WEKSPVYYVNIPKDLLGPKSGKGLCPDDSI---SGDQVDVSQNEHWFEMIEMRWKKINEI 1550
Query: 1593 MEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDG 1652
K++VRKF WN+KVQ+QVLK VSIQ+ G LN ++GL+ V S+++LS VH+ +
Sbjct: 1551 FTKKNVRKFAWNLKVQVQVLKCPGVSIQKLGFLNSARRNMGLKLVDGSYIVLSRVHMSNV 1610
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
IDMCIV+WILWPDDER+S NLEKEVKKRLS EAAAAANRSG+WKNQMRR AHNGCCRRV
Sbjct: 1611 IDMCIVAWILWPDDERNSTLNLEKEVKKRLSGEAAAAANRSGQWKNQMRRVAHNGCCRRV 1670
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
AQTRALCSVLWKL++SE+L++AL NIEIPLV +LADME WGIGVDMEGC++ARNLL KKL
Sbjct: 1671 AQTRALCSVLWKLIISEKLLDALNNIEIPLVGILADMETWGIGVDMEGCIRARNLLGKKL 1730
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
R LEK+AY LAGM FSLY AADIANVLYGHLKL IPEG NKGKQHPSTDKHCLDLLR+EH
Sbjct: 1731 RCLEKEAYRLAGMTFSLYAAADIANVLYGHLKLSIPEGFNKGKQHPSTDKHCLDLLRNEH 1790
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
PIVPVIKEHRTLAKL NCTLGSICSLA++S TQKYTLHGHWLQTSTATGRLSMEEPNLQ
Sbjct: 1791 PIVPVIKEHRTLAKLFNCTLGSICSLAKLSARTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1850
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
CVEH VEFKM NED +VDHCKINARDFFI +QENW+LL+ADYSQIELRLMAHFSK
Sbjct: 1851 CVEHAVEFKM-NED------DVDHCKINARDFFISTQENWLLLSADYSQIELRLMAHFSK 1903
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI LLS PHGDVFTMIAARWTG++EDS+GS ERDQTKRL+YGILYGMG +L+ QL
Sbjct: 1904 DSLLIELLSIPHGDVFTMIAARWTGKTEDSIGSHERDQTKRLVYGILYGMGAKSLALQLE 1963
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
CS +EA EKI+SFKSSFPGVASWLH AV+ C QKGYVE+LKGR+RFLSKI +KEKSK
Sbjct: 1964 CSRDEAVEKIQSFKSSFPGVASWLHEAVAFCRQKGYVETLKGRRRFLSKINSPISKEKSK 2023
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSL--AANFQMLKGRCRLLLQVH 2130
AQRQAVNSICQGSAADIIK+AMI+++S+I G PD ++ AAN +L+G CR++LQVH
Sbjct: 2024 AQRQAVNSICQGSAADIIKLAMIHVYSVI--GTDAPDLTVLPAANSNILRGHCRIVLQVH 2081
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQADNY 2184
DELVLEVDPS +KEA SL+QK ME+AA LLVPL VK++VG TWGSLE F DN+
Sbjct: 2082 DELVLEVDPSFVKEAASLLQKSMENAASLLVPLQVKLKVGRTWGSLETFLPDNF 2135
>gi|297802740|ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315090|gb|EFH45513.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 2147
Score = 2581 bits (6691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1382/2207 (62%), Positives = 1641/2207 (74%), Gaps = 85/2207 (3%)
Query: 1 MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDG 60
M S S ++RIDQFY SKKRK +SP++KSGR EK+ K+T E SP KGTLDNYLK S DD
Sbjct: 1 MDSDSSKSRIDQFYVSKKRKHQSPNLKSGRNEKNVKVTGERSPGDKGTLDNYLKASLDDK 60
Query: 61 HTSKQSLLSRHEVVKRNLSLEIDKYSKDEKNQALLSDQAQPQATQKVISRCSSKEGNSE- 119
T+ L +R E R L LE+ S E L ++ + + S++ + E
Sbjct: 61 STTNSGLQARQEAFTRKLDLEVSASSVGENINPCLPKPVTIATFKECLDQNGSRDLHKEG 120
Query: 120 --VGCHMKDG--SAHIPESLELKQFPTDFLSLYCSEIHSSASSPSEAKLKDHKRHSSPSL 175
H DG A+ ++ EL+ F T FLSLYCS + S SP K + KR SS S
Sbjct: 121 VAAEAHATDGLHCANQKDNSELRDFATSFLSLYCSGLQSVVGSPPHQKANELKRRSSSSS 180
Query: 176 LGGEDNKIAKKKYC----------VSNLLQSGEQTTCSNAKNIEETQSGFIVKTGNLVPN 225
L +D + + K+ C ++N L S ++ N N +++ S K
Sbjct: 181 LA-QDIQSSHKRRCESENIPSLDDLANPLGSKPESLARNGDNRDKSVSDHTKKM------ 233
Query: 226 SSQRVTDSNASLLLQASLRKCDKSSKSTLNTTACYTPEPSIVKTYVRETPKSTCGNSIFS 285
SN + + LRKC K+ +S+ + T +TP S +K+ TPKS G+S+FS
Sbjct: 234 ------PSNEYVEIPMGLRKCSKAPESSAHLTEFHTP-GSAIKSCPVGTPKSGSGSSMFS 286
Query: 286 PGEAFWNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNEINNSYNLRNKNYNKSKEMLNE 345
PG++FWNEAI++ADG + S + D I + N +K K L+
Sbjct: 287 PGDSFWNEAIQVADGLTIPIENSGSV---KVKDGDQHGTILSCSNKTDKCNEMLKRSLDL 343
Query: 346 GDSKVQHIKAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFEDKNLKG-TKPGCGAADTSE 404
+S+V A G K + K D KE+SPLP+K+L+ LF+DKN+ G + C + D +
Sbjct: 344 DESRVNDKDAIGFSKVLEKHGRDFNKEVSPLPVKNLELLFQDKNINGGLREQCASFDQNN 403
Query: 405 AMMFRDGVVSEKGSVTHKSCQKIKFKCHHDNTSRTEGISDVQEKDSVLIVHERKLDISSQ 464
+ +SE V +K C+ + + + E VL+ E +
Sbjct: 404 -ITLGSSRISESAFVDNKGCETLDIVNSQADKGLIGKMYPEPEGKKVLLCEENR------ 456
Query: 465 GIDSITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRGISK 524
G+ S++ S ++KPV + +S+E+ TPSSS D L LS+WLPSE+CS+Y K+GISK
Sbjct: 457 GVRSVSMISN---MRKPVDSSESEESHTPSSSHRNYDGLILSTWLPSEVCSVYNKKGISK 513
Query: 525 LYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICA 584
LYPWQVECL VDGVLQ+RNLVYCASTSAGKSFVAE+LMLRR+I+TGKMALLVLPYVSICA
Sbjct: 514 LYPWQVECLQVDGVLQKRNLVYCASTSAGKSFVAEVLMLRRVITTGKMALLVLPYVSICA 573
Query: 585 EKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIG 644
EKAEHLEVLLEPLG+HVRSYYGNQGGG+LPK TSVAVCTIEKANSL+NR+LEEGRLSE+G
Sbjct: 574 EKAEHLEVLLEPLGKHVRSYYGNQGGGTLPKGTSVAVCTIEKANSLINRLLEEGRLSELG 633
Query: 645 IIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVG 704
IIVIDELHMV DQ+RGYLLEL+LTKLRYAAGEG+S+SSSGE+SG SSGKADPAHGLQIVG
Sbjct: 634 IIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGSSESSSGESSGNSSGKADPAHGLQIVG 693
Query: 705 MSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKD 764
MSATMPNV AVADWLQAALY+T FRPVPLEEYIKVG+ IY+KKM+VVRTI AA++GGKD
Sbjct: 694 MSATMPNVGAVADWLQAALYQTEFRPVPLEEYIKVGSTIYNKKMEVVRTIPKAADMGGKD 753
Query: 765 PDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAI 824
PDHIVELC+EVVQEG+SVLIFCSSRKGCESTARH+SK +KK I+V +SEF+DI SAI
Sbjct: 754 PDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHISKLIKKVPIDVDGKNSEFMDIRSAI 813
Query: 825 DALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVN 884
DALRR P+G+DPVLEETLPSGVAYHHAGLTVEERE+VETCYRKGLVRVLTATSTLAAGVN
Sbjct: 814 DALRRSPSGVDPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVN 873
Query: 885 LPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNES 944
LPARRVIFRQP IGRDFIDGTRY+QM+GRAGRTGIDTKGES+LICKP E+K+IM LLNE+
Sbjct: 874 LPARRVIFRQPMIGRDFIDGTRYKQMSGRAGRTGIDTKGESVLICKPGELKRIMALLNET 933
Query: 945 CPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSL 1004
CPPL SCLSEDKNGMTHAILEVVAGGIVQTA+DIHRYVRCTLLNSTKPFQDVVKSAQDSL
Sbjct: 934 CPPLQSCLSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLLNSTKPFQDVVKSAQDSL 993
Query: 1005 RWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
RWLCHRKFLEWNE+TKLY+TTPLGR +FGSSLCPEESLIVLDDL RAREG V+ASDLHLV
Sbjct: 994 RWLCHRKFLEWNEETKLYTTTPLGRGSFGSSLCPEESLIVLDDLLRAREGLVMASDLHLV 1053
Query: 1065 YLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDS 1124
YL TPINV VEP+WELYYERF+ELS L+QSVGN+VGV EP+LMRMAHGA +R +K +D
Sbjct: 1054 YLVTPINVGVEPNWELYYERFMELSPLEQSVGNRVGVVEPFLMRMAHGATVRTINKPQDV 1113
Query: 1125 TKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGM 1184
K L G+ + R G TS MLSD Q LRVCKRF+VALILS+LVQE V EVCE FKVARGM
Sbjct: 1114 KKNLRGEYDNRHGSTSMKMLSDEQMLRVCKRFFVALILSKLVQEASVTEVCEAFKVARGM 1173
Query: 1185 VQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRA 1244
VQALQENAGRF+SMVSVFCERLGW+DLEGL+AKFQNRVSFGVRAEIVELT+IPY+KGSRA
Sbjct: 1174 VQALQENAGRFSSMVSVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTSIPYIKGSRA 1233
Query: 1245 RALYKAGLRTPLAIAEASISEIVKALFESSSWIAE--AQRRVQLGVAKKIKNGARKIVLE 1302
RALYKAGLRT AIAEASI EIVKALFESS+W AE QRR+ LG+AKKIKNGARKIVLE
Sbjct: 1234 RALYKAGLRTSQAIAEASIPEIVKALFESSAWAAEGTGQRRIHLGLAKKIKNGARKIVLE 1293
Query: 1303 KAEEARIAAFSAFKSLGLNVPQFSRPILSTATENSTGEEEAATTAPRNDKSSSFIFPVPM 1362
KAEEAR AAFSAFKSLGL+V + S+P+ + G+E T R D S + P +
Sbjct: 1294 KAEEARAAAFSAFKSLGLDVHELSKPLPLAPASSPNGQE----TTER-DISRGSVGPDGL 1348
Query: 1363 EHSDKPSLEANQISKKVDLESAGEKLLETSDNELSALVEGGSITELQQKFDAENPPVPFV 1422
+ S K +E + D+++ EK E L E + L P
Sbjct: 1349 QQSIKVHMEC----ENFDMDNHREKPSEVLGATLGVSSEVNMTSRL-----------PNF 1393
Query: 1423 GPGTGGVEFNVNASEIKIPDTTLSVQLGKN-AIGTITSNRDLDLEVQDRPNRDPCLVNKD 1481
GP V N ++ + TL + + N I T+ + V+ R+ NKD
Sbjct: 1394 GPIGTTVGTNGPSAVSILSSDTLPIPVYDNREIKTVDN-------VEQHLTRN---ANKD 1443
Query: 1482 RACNKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENS 1541
KGPI A N SGGFD FL+ WE+ EF+FD+HY+K + NS + +EIHG+A+CW +S
Sbjct: 1444 GTGEKGPITAGNISGGFDSFLELWESAGEFFFDLHYNKLQDLNSRISYEIHGIAICWNSS 1503
Query: 1542 PVYYVNLPKDLWS-DHRRKDRFLIYGSSDKN-VLTPEHQLEMIKQRWKRIGEIMEKRDVR 1599
PVYYVNL KDL + + K + + KN VL + ++IK RW +I +IM + R
Sbjct: 1504 PVYYVNLNKDLPNLECVEKQKLIEDAVVGKNEVLATHNMFDVIKSRWNKISKIMGNVNTR 1563
Query: 1600 KFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVS 1659
KFTWN+KVQIQVLK A+SIQR LNL LE V S+L++ P+ IDM IV+
Sbjct: 1564 KFTWNLKVQIQVLKSPAISIQRCNRLNLAEGIRDLELVDGSWLMMPPLRTSHTIDMSIVT 1623
Query: 1660 WILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALC 1719
WILWPD+ER SNPN++KEVKKRLS EAA AANRSGRW+NQ+RR AHNGCCRRVAQTRALC
Sbjct: 1624 WILWPDEERHSNPNIDKEVKKRLSPEAAEAANRSGRWRNQIRRVAHNGCCRRVAQTRALC 1683
Query: 1720 SVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKA 1779
S LWK+LVSEEL+EAL E+PLVNVLADMELWGIGVD+EGCL+ARN+L+ KLR LEKKA
Sbjct: 1684 SALWKILVSEELLEALTTTEMPLVNVLADMELWGIGVDIEGCLRARNILRDKLRSLEKKA 1743
Query: 1780 YTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIK 1839
+ LAGM FSL+ ADIANVL+G LKLPIPE +KGK HPSTDKHCLDLLR+EHP+VP+IK
Sbjct: 1744 FELAGMTFSLHNPADIANVLFGQLKLPIPENQSKGKLHPSTDKHCLDLLRNEHPVVPIIK 1803
Query: 1840 EHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVE 1899
EHRTLAKLLNCTLGSICSLA++ +STQ+YTLHG WLQTSTATGRLS+EEPNLQ VEH VE
Sbjct: 1804 EHRTLAKLLNCTLGSICSLAKLRLSTQRYTLHGRWLQTSTATGRLSIEEPNLQSVEHEVE 1863
Query: 1900 FKM--SNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
F + + +D+ N++ D KINARDFF+P+QENW+LL ADYSQIELRLMAHFS+D +LI
Sbjct: 1864 FILDKNGKDV---NSDADSYKINARDFFVPTQENWLLLTADYSQIELRLMAHFSRDSSLI 1920
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
L +P GDVFTMIAA+WTG++E SV +RDQTKRLIYGILYGMG N L+EQL CSS+E
Sbjct: 1921 SQLRQPEGDVFTMIAAKWTGKAEGSVSPHDRDQTKRLIYGILYGMGANRLAEQLECSSDE 1980
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
AKEKI+SFKSSFP V SWL+ +S C +KGY+++LKGR+RFLSKIKFGN KEKSKAQRQA
Sbjct: 1981 AKEKIRSFKSSFPAVTSWLNETISFCQEKGYIQTLKGRRRFLSKIKFGNAKEKSKAQRQA 2040
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGV--YKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
VNS+CQGSAADIIKIAMINI+S I V SS F MLKGRCR+LLQVHDELVL
Sbjct: 2041 VNSMCQGSAADIIKIAMINIYSAIAEDVDTTASSSSSETRFHMLKGRCRILLQVHDELVL 2100
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQAD 2182
EVDPS +K A L+Q ME+A LLVPL VK++VG TWGSLEPFQAD
Sbjct: 2101 EVDPSYVKVAAMLLQTSMENAVSLLVPLHVKLKVGKTWGSLEPFQAD 2147
>gi|145334203|ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
gi|62241195|dbj|BAD93700.1| helicase and polymerase containing protein TEBICHI [Arabidopsis
thaliana]
gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit [Arabidopsis thaliana]
Length = 2154
Score = 2570 bits (6661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1379/2216 (62%), Positives = 1657/2216 (74%), Gaps = 96/2216 (4%)
Query: 1 MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDG 60
M S S ++RIDQFY SKKRK +SP++KSGR EK+ K+T E SP KGTLD+YLK S DD
Sbjct: 1 MDSDSSKSRIDQFYVSKKRKHQSPNLKSGRNEKNVKVTGERSPGDKGTLDSYLKASLDDK 60
Query: 61 HTSKQSLLSRHEVVKRNLSLEIDKYSKDEKNQALLSDQAQPQATQKVISRCSSKEGNSE- 119
T+ L +R E R L LE+ S + L ++ + + S++ + E
Sbjct: 61 STTNSGLQARQEAFTRKLDLEVSASSVGQNIHPCLPKPVSFATFKECLGQNGSQDLHKEG 120
Query: 120 --VGCHMKDG--SAHIPESLELKQFPTDFLSLYCSEIHSSASSPSEAKLKDHKRHSSPSL 175
H DG A+ ++ EL+ F T FLSLYCS + S SP K + KR SS S
Sbjct: 121 VAAETHATDGLLCANQKDNSELRDFATSFLSLYCSGVQSVVGSPPHQKENELKRRSSSSS 180
Query: 176 LGGEDNKIAKKKYCVSNLLQSGEQTTCSNAKNIEETQSGFIVKTGNLVPNSSQRVTD--- 232
L +D +I+ K+ C S + S + T N ++ + + GN N + V+D
Sbjct: 181 LA-QDIQISHKRRCESENIPSLDDLT-----NPLGSKPESLARNGN---NRDKPVSDPTK 231
Query: 233 ---SNASLLLQASLRKCDKSSKSTLNTTACYTPEPSIVKTYVRETPKSTCGNSIFSPGEA 289
SN S+ + LRKC K+ +S+ + T +TP S +K+ TPKS CG+S+FSPGEA
Sbjct: 232 KMPSNESVEIPMGLRKCSKAPESSAHLTEFHTPG-SAIKSCPVGTPKSGCGSSMFSPGEA 290
Query: 290 FWNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNE---INNSYNLRNKNYNKSKEMLNEG 346
FWNEAI++ADG + G ++K +++ I + +K K + L+
Sbjct: 291 FWNEAIQVADGLTIPIE------NFGSVEAKVRDQHVTILSCSKKTDKCTEKLERSLDLD 344
Query: 347 DSKVQHIKAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFEDKNLKG-TKPGCGAADTSEA 405
+ +V+ A G K + K D KE+ LP+K+L+ LF+DKN+ G + C + D +
Sbjct: 345 EIRVKDKDAIGFSKVVEKHGRDFNKEVYQLPVKNLELLFQDKNINGGIQERCASFDQNN- 403
Query: 406 MMFRDGVVSEKGSVTHKSCQKIKFKCHHDNTSRTEGISDVQ----EKDSVLIVHERKLDI 461
+ +SE V +K C+ + +N +G+ E VL+ E +
Sbjct: 404 ITLGSSRISESAFVGNKGCENLDIA---NNAQADKGLIGKMYPEPEGKKVLLCEENR--- 457
Query: 462 SSQGIDSITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRG 521
G+ S++ S ++KPVG+ +S+E+ TPSSS D L LS+WLPSE+CS+Y K+G
Sbjct: 458 ---GVRSVSMISN---MRKPVGSSESEESHTPSSSHRNYDGLSLSTWLPSEVCSVYNKKG 511
Query: 522 ISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVS 581
ISKLYPWQVECL VDGVLQ+RNLVYCASTSAGKSFVAE+LMLRR+I TGKMALLVLPYVS
Sbjct: 512 ISKLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFVAEVLMLRRVIRTGKMALLVLPYVS 571
Query: 582 ICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLS 641
ICAEKAEHLEVLLEPLG+HVRSYYGNQGGG+LPKDTSVAVCTIEKANSL+NR+LEEGRLS
Sbjct: 572 ICAEKAEHLEVLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLS 631
Query: 642 EIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQ 701
E+GIIVIDELHMV DQ+RGYLLEL+LTKLRYAAGEG+S+SSSGE+SGTSSGKADPAHGLQ
Sbjct: 632 ELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGSSESSSGESSGTSSGKADPAHGLQ 691
Query: 702 IVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLG 761
IVGMSATMPNV AVADWLQAALY+T FRPVPLEEYIKVG+ IY+KKM+VVRTI AA++G
Sbjct: 692 IVGMSATMPNVGAVADWLQAALYQTEFRPVPLEEYIKVGSTIYNKKMEVVRTIPKAADMG 751
Query: 762 GKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDIT 821
GKDPDHIVELC+EVVQEG+SVLIFCSSRKGCESTARH+SK +K +NV +SEF+DI
Sbjct: 752 GKDPDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHISKLIKNVPVNVDGENSEFMDIR 811
Query: 822 SAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAA 881
SAIDALRR P+G+DPVLEETLPSGVAYHHAGLTVEERE+VETCYRKGLVRVLTATSTLAA
Sbjct: 812 SAIDALRRSPSGVDPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAA 871
Query: 882 GVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLL 941
GVNLPARRVIFRQP IGRDFIDGTRY+QM+GRAGRTGIDTKG+S+LICKP E+K+IM LL
Sbjct: 872 GVNLPARRVIFRQPMIGRDFIDGTRYKQMSGRAGRTGIDTKGDSVLICKPGELKRIMALL 931
Query: 942 NESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQ 1001
NE+CPPL SCLSEDKNGMTHAILEVVAGGIVQTA+DIHRYVRCTLLNSTKPFQDVVKSAQ
Sbjct: 932 NETCPPLQSCLSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLLNSTKPFQDVVKSAQ 991
Query: 1002 DSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDL 1061
DSLRWLCHRKFLEWNE+TKLY+TTPLGR +FGSSLCPEESLIVLDDL RAREG V+ASDL
Sbjct: 992 DSLRWLCHRKFLEWNEETKLYTTTPLGRGSFGSSLCPEESLIVLDDLLRAREGLVMASDL 1051
Query: 1062 HLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKL 1121
HLVYL TPINV VEP+WELYYERF+ELS L+QSVGN+VGV EP+LMRMAHGA +R ++
Sbjct: 1052 HLVYLVTPINVGVEPNWELYYERFMELSPLEQSVGNRVGVVEPFLMRMAHGATVRTLNRP 1111
Query: 1122 RDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVA 1181
+D K L G+ + R G TS MLSD Q LRVCKRF+VALILS+LVQE V EVCE FKVA
Sbjct: 1112 QDVKKNLRGEYDSRHGSTSMKMLSDEQMLRVCKRFFVALILSKLVQEASVTEVCEAFKVA 1171
Query: 1182 RGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKG 1241
RGMVQALQENAGRF+SMVSVFCERLGW+DLEGL+AKFQNRVSFGVRAEIVELT+IPY+KG
Sbjct: 1172 RGMVQALQENAGRFSSMVSVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTSIPYIKG 1231
Query: 1242 SRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAE--AQRRVQLGVAKKIKNGARKI 1299
SRARALYKAGLRT AIAEASI EIVKALFESS+W AE QRR+ LG+AKKIKNGARKI
Sbjct: 1232 SRARALYKAGLRTSQAIAEASIPEIVKALFESSAWAAEGTGQRRIHLGLAKKIKNGARKI 1291
Query: 1300 VLEKAEEARIAAFSAFKSLGLNVPQFSRPILSTATENSTGEEEAATTAPRNDKSSSFIFP 1359
VLEKAEEAR AAFSAFKSLGL+V + S+P+ + G+E T R D S + P
Sbjct: 1292 VLEKAEEARAAAFSAFKSLGLDVNELSKPLPLAPASSLNGQE----TTER-DISRGSVGP 1346
Query: 1360 VPMEHSDKPSLEANQISKKVDLESAGEKLLETSDNELSALVEGGSITELQQKFDAENPPV 1419
++ S+E + + D+++ EK E + + ++T F V
Sbjct: 1347 DGLQQ----SIEGHMECENFDMDNHREKPSEVLGDATLGVSSEINLTSRLPNFRPIGTAV 1402
Query: 1420 PFVGPGTGGVEFNVNASEIKIPDTTLSVQLGKNAIGTITSNRDLDLE--VQDRPNRD--- 1474
GP + +++ IP + NR++ + V+ R+
Sbjct: 1403 GTNGPSAVSI---LSSDTFPIP---------------VYDNREIKPKDNVEQHLTRNDHI 1444
Query: 1475 PCLVNKDRACNKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGL 1534
P NKD KGP+ A N SGGFD FL+ W + EF+FD+HY+K + NS + +EIHG+
Sbjct: 1445 PLSSNKDGTGEKGPVTAGNISGGFDSFLELWGSAGEFFFDLHYNKLQDLNSRISYEIHGI 1504
Query: 1535 AVCWENSPVYYVNLPKDLWS-DHRRKDRFL---IYGSSDKNVLTPEHQLEMIKQRWKRIG 1590
A+CW SPVYYVNL KDL + + K + + + G S+ VL + L++IK RW +I
Sbjct: 1505 AICWNCSPVYYVNLNKDLPNLECVEKQKLIEDAVIGKSE--VLASHNMLDVIKSRWNKIS 1562
Query: 1591 EIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLK 1650
+IM + RKFTWN+KVQIQVLK A+SIQR LNL + E V S+L++ P+H
Sbjct: 1563 KIMGNVNTRKFTWNLKVQIQVLKSPAISIQRCTRLNL-PEGIRDELVDGSWLMMPPLHTS 1621
Query: 1651 DGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
IDM IV WILWPD+ER SNPN++KEVKKRLS EAA AANRSGRW+NQ+RR AHNGCCR
Sbjct: 1622 HTIDMSIVIWILWPDEERHSNPNIDKEVKKRLSPEAAEAANRSGRWRNQIRRVAHNGCCR 1681
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
RVAQTRALCS LWK+LVSEEL++AL IE+PLVNVLADMELWGIG+D+EGCL+ARN+L+
Sbjct: 1682 RVAQTRALCSALWKILVSEELLQALTTIEMPLVNVLADMELWGIGIDIEGCLRARNILRD 1741
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
KLR LEKKA+ LAGM FSL+ ADIANVL+G LKLPIPE +KGK HPSTDKHCLDLLR+
Sbjct: 1742 KLRSLEKKAFELAGMTFSLHNPADIANVLFGQLKLPIPENQSKGKLHPSTDKHCLDLLRN 1801
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
EHP+VP+IKEHRTLAKLLNCTLGSICSLA++ +STQ+YTLHG WLQTSTATGRLS+EEPN
Sbjct: 1802 EHPVVPIIKEHRTLAKLLNCTLGSICSLAKLRLSTQRYTLHGRWLQTSTATGRLSIEEPN 1861
Query: 1891 LQCVEHMVEFKM--SNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
LQ VEH VEFK+ + D+ +++ D KINARDFF+P+QENW+LL ADYSQIELRLMA
Sbjct: 1862 LQSVEHEVEFKLDKNGRDV---SSDADRYKINARDFFVPTQENWLLLTADYSQIELRLMA 1918
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
HFS+D +LI LS+P GDVFTMIAA+WTG++EDSV +RDQTKRLIYGILYGMG N L+
Sbjct: 1919 HFSRDSSLISKLSQPEGDVFTMIAAKWTGKAEDSVSPHDRDQTKRLIYGILYGMGANRLA 1978
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
EQL C+S+EAKEKI+SFKSSFP V SWL+ +S C +KGY+++LKGR+RFLSKIKFGN K
Sbjct: 1979 EQLECTSDEAKEKIRSFKSSFPAVTSWLNETISFCQEKGYIQTLKGRRRFLSKIKFGNAK 2038
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGV--YKPDSSLAANFQMLKGRCRLL 2126
EKSKAQRQAVNS+CQGSAADIIKIAMINI+S I V SS F MLKGRCR+L
Sbjct: 2039 EKSKAQRQAVNSMCQGSAADIIKIAMINIYSAIAEDVDTAASSSSSETRFHMLKGRCRIL 2098
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQAD 2182
LQVHDELVLEVDPS +K A L+Q ME+A LLVPL VK++VG TWGSLEPFQ D
Sbjct: 2099 LQVHDELVLEVDPSYVKLAAMLLQTSMENAVSLLVPLHVKLKVGKTWGSLEPFQTD 2154
>gi|357436569|ref|XP_003588560.1| DNA polymerase I family protein expressed [Medicago truncatula]
gi|355477608|gb|AES58811.1| DNA polymerase I family protein expressed [Medicago truncatula]
Length = 2269
Score = 2529 bits (6556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1335/2135 (62%), Positives = 1578/2135 (73%), Gaps = 178/2135 (8%)
Query: 161 EAKLKDHKRHSSPSLLGGEDNKIAKKKYCVSNLLQSGEQTTCSNAKNIEETQSGFIVKTG 220
+ ++K HK++ S +L+ E++ +K +++L G + S ++ +SG T
Sbjct: 203 KTRVKGHKKYDSLTLV--EESSSIPQKCDDTSVLHFGCENISSEKITVD-MKSGVAGNTL 259
Query: 221 NLVPNSSQRVTDSNASLLLQASLRKCDKSSKSTLNTTACYTPEPSIVKTYVRETPKSTCG 280
+P S +V+D A+ RKC +S S +N C TP IVK +R TPKST G
Sbjct: 260 ESIPGCSAKVSDGGATNAFDTGFRKCSNTSTS-MNMAECQTPGSLIVKACIRGTPKSTRG 318
Query: 281 NSIFSPGEAFWNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNEINNSYNLRNKNYNKSK 340
+S+FSPGEAFW+EAI++ADG T S++ E Q E+ S NL+N + K++
Sbjct: 319 SSMFSPGEAFWDEAIQLADGLVVPTGNDASKVIEESNVVGDQVEMKGSCNLQNYD-GKAR 377
Query: 341 EMLNEGDSKVQHIKAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFE---DKNL------- 390
++L++ + L +M DS+KE S LP+KH DF + D+N+
Sbjct: 378 KILDQSKNI--------GLAEMHTK--DSMKEASSLPVKHFDFSNDHNMDENILQNCRVD 427
Query: 391 KGTKPGCGAADTSEAMMFRDGVVSEKGSVTHKSCQKIKFKCHHDNTSRTEGISDVQEKDS 450
CG+ E + VVS TH+ ++K K D +
Sbjct: 428 NQVNVTCGSGRKYEPI----SVVSR----THEQPYEVK-KILADELGK------------ 466
Query: 451 VLIVHERKLDISSQGIDSITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSWLP 510
++ + + S SP N + + S EA TPSS+ L + LDL SWL
Sbjct: 467 -------RMRKDNSNMTSNNFSSPNNEARTTLSIHASFEATTPSSNVSLDNHLDLHSWLQ 519
Query: 511 SEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTG 570
EICSIY+K+GISKLY WQV+CL VDGVLQRRNLVYCASTSAGKSFVAEILMLR++I+TG
Sbjct: 520 PEICSIYRKKGISKLYNWQVDCLRVDGVLQRRNLVYCASTSAGKSFVAEILMLRKVITTG 579
Query: 571 KMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSL 630
KMA+LVLPYVSIC EKAEHLE LLEPLG+HVRSYYGNQGGGSLPKDTSVAVCTIEKANSL
Sbjct: 580 KMAILVLPYVSICTEKAEHLEKLLEPLGKHVRSYYGNQGGGSLPKDTSVAVCTIEKANSL 639
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
+NR+LEEGRLSE+GIIVIDELHMV D RGYLLEL+LTKLRYAAGEG S SS GE SG S
Sbjct: 640 INRLLEEGRLSEMGIIVIDELHMVGDPKRGYLLELMLTKLRYAAGEGISKSSDGEGSGGS 699
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQ------------------AALYETNFRPVP 732
S K DPA GLQIVGMSATMPNVAAVADWLQ AALY+T FRPVP
Sbjct: 700 SDKNDPAQGLQIVGMSATMPNVAAVADWLQSIFSLQVLINLSVPNCIKAALYQTEFRPVP 759
Query: 733 LEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGC 792
LEEYIKVGN+IY+K M++ RTI A+LGGKDPDH+VELC+EVVQEG SVLIFCSSRKGC
Sbjct: 760 LEEYIKVGNSIYNKSMELSRTIPKGADLGGKDPDHVVELCNEVVQEGQSVLIFCSSRKGC 819
Query: 793 ESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAG 852
ESTARHV+KFLK F+++++ ++ EF DITSAI++LR+CPAGLDPVLEET P+GVA+HHAG
Sbjct: 820 ESTARHVAKFLKSFTVDINENNCEFADITSAINSLRKCPAGLDPVLEETFPAGVAFHHAG 879
Query: 853 LTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAG 912
LTVEERE+VETCYRKGL+RVLTATSTLAAGVNLPARRVIFRQPRIG DFIDGTRY QMAG
Sbjct: 880 LTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGCDFIDGTRYMQMAG 939
Query: 913 RAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIV 972
RAGRTGIDTKGES+LICKP+E+KK+MGLLNESCPPLHSCLSED NGMTHAILEVVAGGIV
Sbjct: 940 RAGRTGIDTKGESVLICKPQELKKVMGLLNESCPPLHSCLSEDLNGMTHAILEVVAGGIV 999
Query: 973 QTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAF 1032
QTA DIHRYVRCTLLNSTKPF DVVKSAQ+SLRWLC RKFLEWNEDTKLYSTTPLGRA+F
Sbjct: 1000 QTANDIHRYVRCTLLNSTKPFLDVVKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGRASF 1059
Query: 1033 GSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALD 1092
GSSLCPEESLIVL DLSRAREGFVLASDLHLVYL TPINV+VEPDWE YYERF++LS LD
Sbjct: 1060 GSSLCPEESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEPDWESYYERFVKLSPLD 1119
Query: 1093 Q--------------------SVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKL 1132
Q SVGN+VGV+EP+LMRMAHG PM S+K R S + K
Sbjct: 1120 QVKINFPVLVFQPTMLLDLLRSVGNRVGVTEPFLMRMAHGVPMG-SNKSRWS----NNKR 1174
Query: 1133 EYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENA 1192
+ + G++S + SD QTLRVCKRFYVALILS LVQETPV EVCE FKVARGMVQ LQENA
Sbjct: 1175 QNQHGMSSGIVNSDDQTLRVCKRFYVALILSLLVQETPVGEVCEAFKVARGMVQGLQENA 1234
Query: 1193 GRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGL 1252
GRFASMV+VFCERLGW+D EGL+AKFQNRVSFGVRAE+VELTTIPYVKGSRARALYKAGL
Sbjct: 1235 GRFASMVAVFCERLGWHDFEGLVAKFQNRVSFGVRAEVVELTTIPYVKGSRARALYKAGL 1294
Query: 1253 RTPLAIAEASISEIVKALFESSSWIAE--AQRRVQLGVAKKIKNGARKIVLEKAEEARIA 1310
RTPLAIAEASI E+VKALFESSSW E AQR +Q GVAKKIKNGARKIVL+KAEEARIA
Sbjct: 1295 RTPLAIAEASIPELVKALFESSSWGTEGSAQRSLQFGVAKKIKNGARKIVLDKAEEARIA 1354
Query: 1311 AFSAFKSLGLNVPQFSRPILSTATENSTGEEEAATTAPRN-DKSSSFIFPVPMEHSDKPS 1369
AFSAFKSLG +VPQF+ PI STA NS +E +++ D S SFI +++S+ P+
Sbjct: 1355 AFSAFKSLGYDVPQFAPPI-STAVCNSIRKEVGSSSGSDTADTSHSFIDTNHIDNSNVPA 1413
Query: 1370 LEANQISKKVDLESAGEKLLETSDNELSALVEGGSITELQQKFDAENPPVPFVGPGTGGV 1429
LE + L+++SDN VEG S + + VP V P
Sbjct: 1414 LEKEK------------DLIKSSDNGALVSVEGKSDSVMPHSLST----VPVVVPSIN-- 1455
Query: 1430 EFNVNASEIKIPD-TTLSVQLGKNAIGTITSNRDLDLEVQDRPNRDPC----LVNKDRAC 1484
E ++ + KIPD TTLSV L K +I N ++ +R ++N R
Sbjct: 1456 ELSMTSGPAKIPDVTTLSVHLQKQNDKSIMHNGCHAQGTGEQDHRGNLASGNMINSSR-- 1513
Query: 1485 NKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVY 1544
KGPINA+++ GG D FLD W+ EFYFDIHY K E +S FE+HG+A+CWENSP+Y
Sbjct: 1514 -KGPINAVSSPGGLDSFLDLWDTVAEFYFDIHYIKRLELHSAAPFEVHGIAICWENSPMY 1572
Query: 1545 YVNLPKD-LWSDHRRKDRFLIYGSSDKNVLT---PEHQLEMIKQRWKRIGEIMEKRDVRK 1600
Y+NLP+D L S +R+ D F + S K ++ + L RW RI +I+EK++VRK
Sbjct: 1573 YINLPRDILLSGNRKDDGFSLTACSSKQKVSSSNSKQDLMNAMHRWSRISKIIEKKEVRK 1632
Query: 1601 FTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSW 1660
FTWN+KVQIQVLK +VS+QRFG L+ + ++ LE V +S++LL P+H+KD IDMCIV+W
Sbjct: 1633 FTWNLKVQIQVLKKPSVSVQRFGSLDTIDKNMHLEVVDNSYILLPPIHVKDAIDMCIVAW 1692
Query: 1661 ILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCS 1720
ILWPD+E SS+PNL+KEVKKRLS E AAAAN+ GRW+NQMR+AAHNGCCRRVAQTRALCS
Sbjct: 1693 ILWPDEESSSSPNLDKEVKKRLSPEDAAAANQCGRWRNQMRKAAHNGCCRRVAQTRALCS 1752
Query: 1721 VLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAY 1780
VLWKLLVSE+L+EAL+ IEIPLVNVLADMELWGIGVD+EGC+QAR LL K+L+ LEK+AY
Sbjct: 1753 VLWKLLVSEKLVEALMEIEIPLVNVLADMELWGIGVDLEGCIQARKLLVKRLKQLEKEAY 1812
Query: 1781 TLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKE 1840
LAGM FSL ADIA VL+ HLKLPIP+G NKGK HPST KHCLD LR+EHPIVP+IKE
Sbjct: 1813 KLAGMTFSLSMPADIAKVLFEHLKLPIPDGKNKGKNHPSTGKHCLDALRNEHPIVPIIKE 1872
Query: 1841 HRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEF 1900
HRTLAKLLN TLGSICSLAR+S+STQKYTLHGHWLQTSTATGRLSMEEPNLQCVEH V+F
Sbjct: 1873 HRTLAKLLNSTLGSICSLARLSVSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVDF 1932
Query: 1901 KMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLL 1960
KM N D G+A+ + C++NARD+F+P+Q+NW+LL ADYSQIELRLMAHFSKD LI LL
Sbjct: 1933 KM-NGDKNEGDAD-ESCRVNARDYFVPTQDNWLLLTADYSQIELRLMAHFSKDSTLIELL 1990
Query: 1961 SKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKE 2020
KP GDVFTMIAARW G E SVGS++R+QTK+++YGILYGMGPN+L+EQ++C+S+EA E
Sbjct: 1991 RKPDGDVFTMIAARWIGCPEVSVGSRQREQTKKMVYGILYGMGPNSLAEQMDCTSDEASE 2050
Query: 2021 KIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNS 2080
+I +FKS+FPGVASWLH AV+ C KGYVE+LKGRKRFLSKIKFG++ EKSKAQRQAVNS
Sbjct: 2051 RISNFKSTFPGVASWLHEAVAFCRSKGYVETLKGRKRFLSKIKFGSSTEKSKAQRQAVNS 2110
Query: 2081 ICQGSAADIIKIAMINIHSIIVGGVYKPD--SSLAANFQMLKGRCRLLLQVHDELVLEVD 2138
ICQGSAADIIKIAMI I+S I GV K D SS+ A F+ML+ RCR+LLQVHDELVLEVD
Sbjct: 2111 ICQGSAADIIKIAMIKIYSEIFPGVDKLDSSSSVTAKFEMLRDRCRILLQVHDELVLEVD 2170
Query: 2139 PSVIKEAVSLVQKCMESAALLL-------------------------------------- 2160
PSV+KEA L+Q ME+A LL
Sbjct: 2171 PSVVKEAALLLQTSMENAVSLLGLYSLNKLFFWPFLFGCRHKLVKVIEDLTVWSNHIFTV 2230
Query: 2161 ------VPLLVKIQVGSTWGSLEPFQADNYTNVVP 2189
VPL VK++VG TWGSLEPF D +T P
Sbjct: 2231 YAYASAVPLNVKLKVGRTWGSLEPFAPDKFTGDTP 2265
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 1 MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDG 60
M+S SPR R++QFY +KKRK+ SP+ K+GR EK A+I + SPSAKG+L+ YL SQ+D
Sbjct: 1 MSSPSPRNRLNQFYTTKKRKAISPAPKAGRIEKVARIVADGSPSAKGSLEGYLVPSQEDP 60
Query: 61 HTSKQSLLSRHEVVKRNLSLEIDKYSKDEKNQALLSDQAQPQATQKVISRCSSKEGNSEV 120
R ++V+R L L+I S D++ +L + A + I + +S V
Sbjct: 61 --------VRPDLVRRKLGLDIGG-SLDKQPVSLAQEIRHLDAMRAGIENEVTMVDDS-V 110
Query: 121 GCHMKDGSAHIPESLELKQFPTDFLSLYC 149
H + E ELKQF + SLYC
Sbjct: 111 KEHTLSDLGDVGEKSELKQFKAELFSLYC 139
>gi|449522155|ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partial [Cucumis sativus]
Length = 1607
Score = 2349 bits (6088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1194/1652 (72%), Positives = 1356/1652 (82%), Gaps = 73/1652 (4%)
Query: 552 AGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGG 611
AGKSFVAEILMLRR+ISTGKMALLVLPYVSICAEKA HL+VLLE LG+HVRSYYGNQGGG
Sbjct: 1 AGKSFVAEILMLRRVISTGKMALLVLPYVSICAEKAAHLDVLLESLGKHVRSYYGNQGGG 60
Query: 612 SLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLR 671
+LPKDTSVAVCTIEKANSL+NR+LEE RLSEIGIIVIDELHMV DQ RGYLLELLLTKLR
Sbjct: 61 TLPKDTSVAVCTIEKANSLINRLLEECRLSEIGIIVIDELHMVGDQTRGYLLELLLTKLR 120
Query: 672 YAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPV 731
YAAGEG DSSSGE+SGTSSGK+DPAHG+QIVGMSATMPNVAAVADWLQAALY T+FRPV
Sbjct: 121 YAAGEGNLDSSSGESSGTSSGKSDPAHGIQIVGMSATMPNVAAVADWLQAALYHTDFRPV 180
Query: 732 PLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKG 791
PLEEYIKVGN IY+K +D+VRTI ANLGG+DPDHIVELC+EVV++GHSVLIFCSSRKG
Sbjct: 181 PLEEYIKVGNTIYNKSLDIVRTISKTANLGGRDPDHIVELCNEVVEDGHSVLIFCSSRKG 240
Query: 792 CESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHA 851
CESTA+HVSKFLKKFS+ + + +SEF DI SAIDALRRCP+GLDPVLEET PSGVAYHHA
Sbjct: 241 CESTAKHVSKFLKKFSVKIQNDNSEFTDIFSAIDALRRCPSGLDPVLEETFPSGVAYHHA 300
Query: 852 GLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMA 911
GLTVEEREVVETCYRKGL+RVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDG RYRQMA
Sbjct: 301 GLTVEEREVVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGARYRQMA 360
Query: 912 GRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGI 971
GRAGRTGIDTKGES+LIC+PEEVK+I LLNESCPPL SCLSEDKNGMTHAILEVVAGGI
Sbjct: 361 GRAGRTGIDTKGESVLICRPEEVKRINELLNESCPPLQSCLSEDKNGMTHAILEVVAGGI 420
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAA 1031
VQTA DIHRYVRCTLLNSTKPFQDVVKSAQ+SLRWLCH KFLEWN DTKLYSTTPLGRA+
Sbjct: 421 VQTATDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCHGKFLEWNGDTKLYSTTPLGRAS 480
Query: 1032 FGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSAL 1091
FGSSL PEESLIVLDDLSRAREGFVLASDLHLVYL TPINV+VEPDWELYYE F+ LS+L
Sbjct: 481 FGSSLSPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYELFMGLSSL 540
Query: 1092 DQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLR 1151
DQSVGN+VG +EP+LMRMAHGAP+R ++ R+ GL K + +G+ + S+ QT+R
Sbjct: 541 DQSVGNRVGATEPFLMRMAHGAPVRRANISRNGVAGLRTKRDEHVGVYGDRP-SEEQTIR 599
Query: 1152 VCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDL 1211
VCKRFYVALILSRLVQETP+ EVC+ FKVARGMVQALQE+AGRFASMVSVFCERLGW+DL
Sbjct: 600 VCKRFYVALILSRLVQETPIPEVCDAFKVARGMVQALQESAGRFASMVSVFCERLGWHDL 659
Query: 1212 EGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
EGL+AKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEAS +E+VKAL
Sbjct: 660 EGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASDAELVKALS 719
Query: 1272 ESSSWIAE--------AQRRVQLGVAKKIKNGARKIVLEKAEEARIAAFSAFKSLGLNVP 1323
ES+SW E AQ+R+ +G+A+KIK+GARK+VL+KAEEARIAAFSAFKSLG VP
Sbjct: 720 ESASWTTEGERCDYFTAQKRMHVGLARKIKHGARKVVLDKAEEARIAAFSAFKSLGFTVP 779
Query: 1324 QFSRPILSTATENSTGEEEAATTAPRNDKSSSFIFPVPMEHSDKPSLEANQISKKVDLES 1383
Q S P+ ++A N T + T +E V S
Sbjct: 780 QISHPLSASADGNITAQVAVGTQ----------------------QMERVLTLSCVGGTS 817
Query: 1384 AGEKLLETSDNELSALVEGGSITELQQKFDAENPPVPFVGPGTGGVEFNVNASEIKIPDT 1443
+ EK++ + ++ A+ +++Q NPP VNA I D+
Sbjct: 818 SSEKVVGKNPSQTGAIS-----IDVKQSNSGVNPP--------------VNAEGSAIQDS 858
Query: 1444 TLSVQLGKNAIGTITSN--RDLDLEVQDRPNRDPCL--VNKDRACNKGPINAINASGGFD 1499
+ I+S+ R D + Q + L + +D + KGPI A + SGGF+
Sbjct: 859 NTVGECAGKVDVAISSHLERITDKDAQREQHSSKVLHSLKRDGSSMKGPIQAASTSGGFE 918
Query: 1500 CFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRK 1559
FL+ W+A+ EFYFD++Y K SE NS V FE+HG+A+CWE SPVYYVN+PKDL K
Sbjct: 919 SFLNLWDASQEFYFDLYYTKRSEVNSVVPFELHGIAICWEKSPVYYVNIPKDLLGPKSGK 978
Query: 1560 ----DRFLIYGSSDK-NVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKH 1614
D + S D+ +V EH EMI+ RWK+I EI K++VRKF WN+KVQ+QVLK
Sbjct: 979 GLCPDDSI---SGDQVDVSQNEHWFEMIEMRWKKINEIFTKKNVRKFAWNLKVQVQVLKC 1035
Query: 1615 AAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNL 1674
VSIQ+ G LN ++GL+ V S+++LS VH+ + IDMCIV+WILWPDDER+S NL
Sbjct: 1036 PGVSIQKLGFLNSARRNMGLKLVDGSYIVLSRVHMSNVIDMCIVAWILWPDDERNSTLNL 1095
Query: 1675 EKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEA 1734
EKEVKKRLS EAAAAANRSG+WKNQMRR AHNGCCRRVAQTRALCSVLWKL++SE+L++A
Sbjct: 1096 EKEVKKRLSGEAAAAANRSGQWKNQMRRVAHNGCCRRVAQTRALCSVLWKLIISEKLLDA 1155
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L NIEIPLV +LADME WGIGVDMEGC++ARNLL KKLR LEK+AY LAGM FSLY AAD
Sbjct: 1156 LNNIEIPLVGILADMETWGIGVDMEGCIRARNLLGKKLRCLEKEAYRLAGMTFSLYAAAD 1215
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
IANVLYGHLKL IPEG NKGKQHPSTDKHCLDLLR+EHPIVPVIKEHRTLAKL NCTLGS
Sbjct: 1216 IANVLYGHLKLSIPEGFNKGKQHPSTDKHCLDLLRNEHPIVPVIKEHRTLAKLFNCTLGS 1275
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
ICSLA++S TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEH VEFKM NED +V
Sbjct: 1276 ICSLAKLSARTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVEFKM-NED------DV 1328
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
DHCKINARDFFI +QENW+LL+ADYSQIELRLMAHFSKD LI LLS PHGDVFTMIAAR
Sbjct: 1329 DHCKINARDFFISTQENWLLLSADYSQIELRLMAHFSKDSLLIELLSIPHGDVFTMIAAR 1388
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
WTG++EDS+GS ERDQTKRL+YGILYGMG +L+ QL CS +EA EKI+SFKSSFPGVAS
Sbjct: 1389 WTGKTEDSIGSHERDQTKRLVYGILYGMGAKSLALQLECSRDEAVEKIQSFKSSFPGVAS 1448
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
WLH AV+ C QKGYVE+LKGR+RFLSKI +KEKSKAQRQAVNSICQGSAADIIK+AM
Sbjct: 1449 WLHEAVAFCRQKGYVETLKGRRRFLSKINSPISKEKSKAQRQAVNSICQGSAADIIKLAM 1508
Query: 2095 INIHSIIVGGVYKPDSSL--AANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKC 2152
I+++S+I G PD ++ AAN +L+G CR++LQVHDELVLEVDPS +KEA SL+QK
Sbjct: 1509 IHVYSVI--GTDAPDLTVLPAANSNILRGHCRIVLQVHDELVLEVDPSFVKEAASLLQKS 1566
Query: 2153 MESAALLLVPLLVKIQVGSTWGSLEPFQADNY 2184
ME+AA LLVPL VK++VG TWGSLE F DN+
Sbjct: 1567 MENAASLLVPLQVKLKVGRTWGSLETFLPDNF 1598
>gi|357150740|ref|XP_003575560.1| PREDICTED: uncharacterized protein LOC100823290 [Brachypodium
distachyon]
Length = 2057
Score = 2137 bits (5537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1135/1994 (56%), Positives = 1394/1994 (69%), Gaps = 222/1994 (11%)
Query: 273 ETPKSTCGNSIFSPGEAFWNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNEI------- 325
+TPKS +S+ SPGE FWN AIE ADG A D GP + + + KS +
Sbjct: 201 QTPKS--ASSLVSPGEDFWNAAIEFADGISALADKGPRRAYHDVTEDKSSCPVALCSKTL 258
Query: 326 ----NNSYNLRNKNYNKSKEMLNEGDSKVQHIKAGGSLKQMGKDVIDSVKELSPLPIKHL 381
+ ++ N + + ++E +KV+ + K SPLP+KHL
Sbjct: 259 PISGKDDFDCENTVGSNVTKQMDESSNKVELVATTRHHKNN-----------SPLPVKHL 307
Query: 382 DFLFEDK----NLKGTKPG---CGAADTSEAMMFRDGVVSEKGSVTHK--SCQKIKFKCH 432
+F ED+ +L+G + G G + + +D ++ H + I F H
Sbjct: 308 NFFHEDEIQVSSLEGKEKGGTFSGNVQVDQGKL-KDNCFPRMENLRHSVDDLKTITFDPH 366
Query: 433 HDNTSR--TEGISDVQEKDSVLIVHERKLDISSQGIDSITSD------------SPTNVI 478
++ +EG+ S ++ ++ +G + +D +
Sbjct: 367 TNSPIMIPSEGLFK-----SNMVGKGHSTEMGGEGCCMVKTDLNQLTHGETKSLPAYSNC 421
Query: 479 KKPVGNEKSD------EAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQ--- 529
+KP + +S E TP+SS LKD LSSWLP ++C++Y K+GIS+LYPWQ
Sbjct: 422 RKPCRDSQSKFASQRVEVSTPTSSVPLKDHSKLSSWLPPQLCAVYMKKGISELYPWQSPI 481
Query: 530 -------------------------VECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLR 564
VECL VDGVL++RNLVYCASTSAGKSFVAE+LMLR
Sbjct: 482 VNFISFNCSVFLYYLLPIMLTYQLQVECLLVDGVLEKRNLVYCASTSAGKSFVAEVLMLR 541
Query: 565 RLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTI 624
R++S+G +A+LVLPYVS+CAEKA HLE LLEPLGRHVRS+YGNQGGGSLPKDTSVAVCTI
Sbjct: 542 RILSSGNIAILVLPYVSLCAEKAAHLEQLLEPLGRHVRSFYGNQGGGSLPKDTSVAVCTI 601
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EKANSLVN++LE+GRLSE+GIIVIDELHMV DQ+RGYLLEL+LTKLRYAAGEG S+SSSG
Sbjct: 602 EKANSLVNKLLEDGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGNSESSSG 661
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQ----------AALYETNFRPVPLE 734
ENS +SSGK HGLQI+GMSATMPNVAAVADWLQ AALY+T FRPVPLE
Sbjct: 662 ENSSSSSGKTGATHGLQIIGMSATMPNVAAVADWLQVRKLYFFCSYAALYQTTFRPVPLE 721
Query: 735 EYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
E+IKVGN ++ K M++VR + A+LGGKDPDHIVELC+EV+ EGHSVL+FCSSRKGCES
Sbjct: 722 EFIKVGNQLFDKDMNIVRVLPKVADLGGKDPDHIVELCNEVILEGHSVLLFCSSRKGCES 781
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
TARH++K+LK ++ SEF D SA++AL+RCPAGLDPVLEETLP GVAYHHAGLT
Sbjct: 782 TARHIAKYLKVAYVHSKEVSSEFQDAASAVEALKRCPAGLDPVLEETLPCGVAYHHAGLT 841
Query: 855 VEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA 914
VEERE+VETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA
Sbjct: 842 VEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA 901
Query: 915 GRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQT 974
GRTGIDTKGES+L+CKPEEVK+I G++ CPPL SCLSEDKNGMTHAI+EVVAGGIVQT
Sbjct: 902 GRTGIDTKGESILVCKPEEVKRITGIIRSECPPLQSCLSEDKNGMTHAIMEVVAGGIVQT 961
Query: 975 AEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGS 1034
A DIHRYVRCTLLNSTKPF DVVKSAQDSLRWLCH++F+EWN DTK+YSTTPLGRA FGS
Sbjct: 962 ASDIHRYVRCTLLNSTKPFDDVVKSAQDSLRWLCHKRFVEWNNDTKIYSTTPLGRACFGS 1021
Query: 1035 SLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQS 1094
SL PEESL+VLDDLSRAREGFVLASDLHLVYL TP NV+VEPDWELYYERF++LS+L+QS
Sbjct: 1022 SLNPEESLVVLDDLSRAREGFVLASDLHLVYLVTPTNVDVEPDWELYYERFMQLSSLEQS 1081
Query: 1095 VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCK 1154
VGN+VGV EP+LM MAHGA M + K + +T G +N L + Q+LRV K
Sbjct: 1082 VGNRVGVIEPFLMHMAHGAAMPVRGKSKKNTSG------------GSNSLINEQSLRVSK 1129
Query: 1155 RFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGL 1214
RFYVAL++SRL QE PV +VCE+FKVARG +QALQENAGRFASMV+ FC+RLGW DLEGL
Sbjct: 1130 RFYVALMISRLAQEIPVTDVCESFKVARGTIQALQENAGRFASMVAAFCQRLGWLDLEGL 1189
Query: 1215 IAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESS 1274
+AKFQNRVSFGVRAEI ELT+IP+VKGSRARALY +GLRTP+ IAEAS+ +I KALFESS
Sbjct: 1190 VAKFQNRVSFGVRAEIAELTSIPFVKGSRARALYNSGLRTPVNIAEASVLQIAKALFESS 1249
Query: 1275 SWIAE---AQRRVQLGVAKKIKNGARKIVLEKAEEARIAAFSAFKSLGLNVPQFSRPILS 1331
+W + RR+QLG+AKK+KNGAR+IVLE+AE AR+AAFSAFKSLG+ VPQF+ P+L
Sbjct: 1250 TWSGQDDSGLRRMQLGIAKKVKNGARRIVLEEAEAARVAAFSAFKSLGVEVPQFTTPLLP 1309
Query: 1332 TATENSTGEEEAATTAPRNDKSSSFIFPVPMEHSDKPSLEANQISKKVDLESAGEKLLET 1391
A+E+S E T P D + + D + N VD ++ E L+E
Sbjct: 1310 -ASEDSPPRE--ITVPPGGDHAKCHESALGTHLGD----DINICFDYVDQRASTEILVE- 1361
Query: 1392 SDNELSALVEGGSITELQQKFDAENPPVPFVGPGTGGVEFNVNASEIKIPDTTLSVQLGK 1451
+ I+ +Q K + G+E NV+ + ++ + LS ++
Sbjct: 1362 ---------DIHPISLIQIK-------------ASEGIENNVSMATMQEEASPLSTEI-- 1397
Query: 1452 NAIGTITSNRDLDLEVQDRPNRDPCLVNKDRACNKGPINAINASGGFDCFLDRWEATHEF 1511
+ P+R+ KGP+NA + GGFD FLD+W + +EF
Sbjct: 1398 ---------------IDKLPSRN--------VAEKGPVNAYSFPGGFDSFLDQWSSVNEF 1434
Query: 1512 YFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKN 1571
FD+H+ + S S +FEI GLAVCWENSP+YY N PKDL + D I+
Sbjct: 1435 TFDLHFVRKSTKLSSAIFEILGLAVCWENSPIYYCNFPKDL-ATTSNNDSVQIW------ 1487
Query: 1572 VLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTS 1631
E +RW RI IM+++ V+K TWN+K+QIQ LK +S QR +L +
Sbjct: 1488 --------EEFNRRWSRIVGIMQQKSVKKMTWNLKIQIQALKSPCISCQRLARSHLDYKT 1539
Query: 1632 L-GLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAA 1690
L +E + S+ ++L P+ + +G+D+C+V+WILWPD+E + PNL+K VK+RL SEAAAAA
Sbjct: 1540 LNNIEVLDSTHVMLPPISVYNGLDICLVAWILWPDEESKAVPNLDKLVKRRLHSEAAAAA 1599
Query: 1691 NRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADME 1750
NR GRW+NQM +AAH+GCCRR AQTRAL SVL LLVS+ L + + +E PLVNVLADME
Sbjct: 1600 NRDGRWRNQMHKAAHDGCCRRAAQTRALGSVLRILLVSQNLNDLVETVEGPLVNVLADME 1659
Query: 1751 LWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG 1810
LWGIG DME CL+AR+++ K+L+ LEK+AY L G FSL + ADIA++LY HLKLP+P+G
Sbjct: 1660 LWGIGADMEACLRARHIIIKRLKELEKEAYKLVGKSFSLNSNADIADILYTHLKLPVPKG 1719
Query: 1811 HNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL 1870
KGK HPSTDK LD LR HPI+ VI++HRTLAKLLN TLGSICS A++ +Q++ +
Sbjct: 1720 IEKGKLHPSTDKQSLDHLRDLHPIISVIRDHRTLAKLLNGTLGSICSRAQLCSKSQRHII 1779
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQE 1930
HG+WLQTSTATGRLSMEEPNL Q+
Sbjct: 1780 HGNWLQTSTATGRLSMEEPNL-------------------------------------QD 1802
Query: 1931 NWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQ 1990
NW+L+ ADYSQIELR MAHFSKDP LI LLSKP DVFTMIA+RW G+ E V S++RD
Sbjct: 1803 NWLLVTADYSQIELRFMAHFSKDPVLIELLSKPDVDVFTMIASRWIGKEESLVSSKDRDN 1862
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
TKR IYGILYGMG N+L+EQL CS EA +KI+SFK FPGV+SWLH AV+SC QKGYVE
Sbjct: 1863 TKRFIYGILYGMGANSLAEQLECSPEEAAQKIQSFKRFFPGVSSWLHAAVASCRQKGYVE 1922
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L GR+RFLSKI GN+ EK+KAQRQAVNSICQGSAADIIK+AM+ +HS+I G DS
Sbjct: 1923 TLMGRRRFLSKITAGNSTEKAKAQRQAVNSICQGSAADIIKVAMLKVHSVITNGNCTVDS 1982
Query: 2111 --SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
L NF ++GRC L+LQVHDELVLEVDPS++ EA L+Q ME+AA LLVPL KI+
Sbjct: 1983 MNGLMHNFSEIRGRCHLILQVHDELVLEVDPSMVAEAGRLLQISMENAASLLVPLRTKIK 2042
Query: 2169 VGSTWGSLEPFQAD 2182
VG TWGSLEPFQ +
Sbjct: 2043 VGKTWGSLEPFQPE 2056
>gi|3063700|emb|CAA18591.1| putative protein [Arabidopsis thaliana]
gi|7270174|emb|CAB79987.1| putative protein [Arabidopsis thaliana]
Length = 1548
Score = 1919 bits (4972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1043/1663 (62%), Positives = 1218/1663 (73%), Gaps = 185/1663 (11%)
Query: 572 MALLVLPYVSICAEK----------AEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAV 621
MALLVLPYVSICAEK AEHLEVLLEPLG+HVRSYYGNQGGG+LPKDTSVAV
Sbjct: 1 MALLVLPYVSICAEKVSVVSPSILHAEHLEVLLEPLGKHVRSYYGNQGGGTLPKDTSVAV 60
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS 681
CTIEKANSL+NR+LEEGRLSE+GIIVIDELHMV DQ+RGYLLEL+LTKLRYAAGEG+S+S
Sbjct: 61 CTIEKANSLINRLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGSSES 120
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQ-----------AALYETNFRP 730
SSGE+SGTSSGKADPAHGLQIVGMSATMPNV AVADWLQ AALY+T FRP
Sbjct: 121 SSGESSGTSSGKADPAHGLQIVGMSATMPNVGAVADWLQVSKTNHNLCVYAALYQTEFRP 180
Query: 731 VPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRK 790
VPLEEYIKVG+ IY+KKM+VVRTI AA++GGKDPDHIVELC+EVVQEG+SVLIFCSSRK
Sbjct: 181 VPLEEYIKVGSTIYNKKMEVVRTIPKAADMGGKDPDHIVELCNEVVQEGNSVLIFCSSRK 240
Query: 791 GCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHH 850
GCESTARH+SK +K +NV +SEF+DI SAIDALRR P+G+DPVLEETLPSGVAYHH
Sbjct: 241 GCESTARHISKLIKNVPVNVDGENSEFMDIRSAIDALRRSPSGVDPVLEETLPSGVAYHH 300
Query: 851 AGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQM 910
AGLTVEERE+VETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQP IGRDFIDGTRY+QM
Sbjct: 301 AGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPMIGRDFIDGTRYKQM 360
Query: 911 AGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGG 970
+GRAGRTGIDTKG+S+LICKP E+K+IM LLNE+CPPL SCLSEDKNGMTHAILEVVAGG
Sbjct: 361 SGRAGRTGIDTKGDSVLICKPGELKRIMALLNETCPPLQSCLSEDKNGMTHAILEVVAGG 420
Query: 971 IVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRA 1030
IVQTA+DIHRYV RKFLEWNE+TKLY+TTPLGR
Sbjct: 421 IVQTAKDIHRYV---------------------------RKFLEWNEETKLYTTTPLGRG 453
Query: 1031 AFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSA 1090
+FGSSLCPEESLIVLDDL RAREG V+ASDLHLVYL TPINV VEP+WELYYERF+ELS
Sbjct: 454 SFGSSLCPEESLIVLDDLLRAREGLVMASDLHLVYLVTPINVGVEPNWELYYERFMELSP 513
Query: 1091 LDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTL 1150
L+QSVGN+VGV EP+LMRMAHGA +R ++ +D K L G+ + R G TS MLSD Q L
Sbjct: 514 LEQSVGNRVGVVEPFLMRMAHGATVRTLNRPQDVKKNLRGEYDSRHGSTSMKMLSDEQML 573
Query: 1151 RVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYD 1210
RVCKRF+VALILS+LVQE V EVCE FKVARGMVQALQENAGRF+SMVSVFCERLGW+D
Sbjct: 574 RVCKRFFVALILSKLVQEASVTEVCEAFKVARGMVQALQENAGRFSSMVSVFCERLGWHD 633
Query: 1211 LEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
LEGL+AKFQNRVSFGVRAEIVELT+IPY+KGSRARALYKAGLRT AIAEASI EIVKAL
Sbjct: 634 LEGLVAKFQNRVSFGVRAEIVELTSIPYIKGSRARALYKAGLRTSQAIAEASIPEIVKAL 693
Query: 1271 FESSSWIAE--AQRRVQLGVAKKIKNGARKIVLEKAEEARIAAFSAFKSLGLNVPQFSRP 1328
FESS+W AE QRR+ LG+AKKIKNGARKIVLEKAEEAR AAFSAFKSLGL+V + S+P
Sbjct: 694 FESSAWAAEGTGQRRIHLGLAKKIKNGARKIVLEKAEEARAAAFSAFKSLGLDVNELSKP 753
Query: 1329 ILSTATENSTGEEEAATTAPRNDKSSSFIFPVPMEHSDKPSLEANQISKKVDLESAGEKL 1388
+ + G+E T R D S + P ++ S+E + + D+++ EK
Sbjct: 754 LPLAPASSLNGQE----TTER-DISRGSVGPDGLQQ----SIEGHMECENFDMDNHREKP 804
Query: 1389 LETSDNELSALVEGGSITELQQKFDAENPPVPFVGPGTGGVEFNVNASEIKIPDTTLSVQ 1448
E + + ++T F V GP + +++ IP
Sbjct: 805 SEVLGDATLGVSSEINLTSRLPNFRPIGTAVGTNGPSAVSI---LSSDTFPIP------- 854
Query: 1449 LGKNAIGTITSNRDLDLE--VQDRPNRD---PCLVNKDRACNKGPINAINASGGFDCFLD 1503
+ NR++ + V+ R+ P NKD KGP+ A N SGGFD FL+
Sbjct: 855 --------VYDNREIKPKDNVEQHLTRNDHIPLSSNKDGTGEKGPVTAGNISGGFDSFLE 906
Query: 1504 RWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFL 1563
W + EF+FD+HY+K + NS + +EIHG+A+CW SPVYYVNL KDL + + + L
Sbjct: 907 LWGSAGEFFFDLHYNKLQDLNSRISYEIHGIAICWNCSPVYYVNLNKDLPNLECVEKQKL 966
Query: 1564 IYGS--SDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQR 1621
I + VL + L++IK RW +I +IM VLK A+SIQR
Sbjct: 967 IEDAVIGKSEVLASHNMLDVIKSRWNKISKIMG---------------NVLKSPAISIQR 1011
Query: 1622 FGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKR 1681
LNL + E V S+L++ P+H IDM IV WILWPD+ER SNPN++KEVKKR
Sbjct: 1012 CTRLNL-PEGIRDELVDGSWLMMPPLHTSHTIDMSIVIWILWPDEERHSNPNIDKEVKKR 1070
Query: 1682 LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIP 1741
LS EAA AANRSGRW+NQ+RR AHNGCCRRVAQTRALCS LWK+LVSEEL++AL IE+P
Sbjct: 1071 LSPEAAEAANRSGRWRNQIRRVAHNGCCRRVAQTRALCSALWKILVSEELLQALTTIEMP 1130
Query: 1742 LVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYG 1801
LVNVLADMELWGIG+D+EGCL+ARN+L+ KLR LEKKA+ LAGM FSL+ ADIANVL+G
Sbjct: 1131 LVNVLADMELWGIGIDIEGCLRARNILRDKLRSLEKKAFELAGMTFSLHNPADIANVLFG 1190
Query: 1802 HLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVP---------VIKEHRTLAKLLNCTL 1852
LKLPIPE +KGK HPSTDKHCLDLLR+ ++ +IK++R L +LL+ +
Sbjct: 1191 QLKLPIPENQSKGKLHPSTDKHCLDLLRYSEWLIAFPYIAFCFFIIKDNR-LFELLSAS- 1248
Query: 1853 GSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM--SNEDIYGG 1910
VEH VEFK+ + D+
Sbjct: 1249 -----------------------------------------VEHEVEFKLDKNGRDV--- 1264
Query: 1911 NAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
+++ D KINARDFF+P+QENW+LL ADYSQIELRLMAHFS+D +LI LS+P GDVFTM
Sbjct: 1265 SSDADRYKINARDFFVPTQENWLLLTADYSQIELRLMAHFSRDSSLISKLSQPEGDVFTM 1324
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFP 2030
IAA+WTG++EDSV +RDQTKRLIYGILYGMG N L+EQL C+S+EAKEKI+SFKSSFP
Sbjct: 1325 IAAKWTGKAEDSVSPHDRDQTKRLIYGILYGMGANRLAEQLECTSDEAKEKIRSFKSSFP 1384
Query: 2031 GVASWLHVAVSSCHQKG--------------------------YVESLKGRKRFLSKIKF 2064
V SWL+ +S C +KG Y+++LKGR+RFLSKIKF
Sbjct: 1385 AVTSWLNETISFCQEKGWGCYRLFPLLFVLNAVLCVPLNHIFIYIQTLKGRRRFLSKIKF 1444
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGV--YKPDSSLAANFQMLKGR 2122
GN KEKSKAQRQAVNS+CQGSAADIIKIAMINI+S I V SS F MLKGR
Sbjct: 1445 GNAKEKSKAQRQAVNSMCQGSAADIIKIAMINIYSAIAEDVDTAASSSSSETRFHMLKGR 1504
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLV 2165
CR+LLQVHDELVLEVDPS +K A L+Q ME+A LL L+
Sbjct: 1505 CRILLQVHDELVLEVDPSYVKLAAMLLQTSMENAVSLLGMFLI 1547
>gi|168066269|ref|XP_001785063.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663356|gb|EDQ50124.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1683
Score = 1727 bits (4473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 935/1714 (54%), Positives = 1201/1714 (70%), Gaps = 109/1714 (6%)
Query: 503 LDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILM 562
LDL+ W+PSE C++Y K+G+ +LYPWQVECL VDGVL R+LVYCASTSAGKS VAE+LM
Sbjct: 45 LDLADWIPSEACAMYAKKGLKRLYPWQVECLQVDGVLDGRSLVYCASTSAGKSLVAEVLM 104
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVC 622
LRR++STGK ALLVLPYV++C+EKA+HL+ +LEPLG+ VR +YG+QGG SL KDTSVAVC
Sbjct: 105 LRRILSTGKKALLVLPYVALCSEKADHLDAILEPLGKRVRGFYGSQGGSSLTKDTSVAVC 164
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS- 681
TIEKANSLVN++LEEGRLSE+ I+VIDELHMV D +RGYLLELLLTKLR+AAG G +S
Sbjct: 165 TIEKANSLVNKLLEEGRLSELAILVIDELHMVGDTDRGYLLELLLTKLRFAAGGGECNSP 224
Query: 682 --SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
SS EN G+SS + LQIVGMSATMPNV+ VA WLQAALY+T FRPVPLEE+IKV
Sbjct: 225 GYSSKENRGSSSSRNTE---LQIVGMSATMPNVSDVATWLQAALYQTVFRPVPLEEFIKV 281
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
G+ IY+KKM+ VR+I A+L GKDPDH+VELC EVV EGHSVL+FCSSRKGCE+TARH+
Sbjct: 282 GHTIYNKKMEFVRSIKKNADLSGKDPDHLVELCHEVVSEGHSVLVFCSSRKGCETTARHI 341
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
SKFL F+I ID +A++ LR+CPAGLDPVL +TLP+GVAYHHAGLT EER+
Sbjct: 342 SKFLPPFTIVERDKMIGPIDGNAAVEELRKCPAGLDPVLADTLPAGVAYHHAGLTGEERD 401
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
+VE C++ G+VRVL ATSTLAAGVNLPARRVIFRQP+IGRDF+D TRYRQMAGRAGR GI
Sbjct: 402 IVEACFKSGVVRVLVATSTLAAGVNLPARRVIFRQPKIGRDFLDATRYRQMAGRAGRAGI 461
Query: 920 DTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIH 979
DTKGES+LICKPEEVK++ ++ + C L SCL++DKNGM A+LEVVAGG+VQTA D+
Sbjct: 462 DTKGESILICKPEEVKRMEEMIRQECKALCSCLADDKNGMIRALLEVVAGGVVQTAADVQ 521
Query: 980 RYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPE 1039
RYVRCTLLN+T+PF++VVK+AQ+SLRWLCH++ +EW+ ++LY+TTPLGRAAF SSL PE
Sbjct: 522 RYVRCTLLNATQPFEEVVKAAQESLRWLCHKQLVEWDRTSRLYTTTPLGRAAFSSSLSPE 581
Query: 1040 ESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQV 1099
ESL+V +DL++AREGFVLASDLHL+Y TP V++EPDW +YY RF+ELS DQ+VGN+V
Sbjct: 582 ESLVVYEDLAKAREGFVLASDLHLLYEVTPTYVDIEPDWGVYYSRFMELSHTDQAVGNRV 641
Query: 1100 GVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKL----------EYRLGITSNNMLSDAQT 1149
GV EP+LMRMAHG P+ + +G GK+ +++ + L Q
Sbjct: 642 GVVEPFLMRMAHGVPL-LQQGGNGRPRG--GKISKAKISPPFQKHKWNSSGAAPLPVEQM 698
Query: 1150 LRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWY 1209
LRVCKRFYV+L+LS+LVQE P++E+CE+FKV RG VQALQ++AGRFA MV FCERLGW
Sbjct: 699 LRVCKRFYVSLMLSKLVQEVPLMEICESFKVPRGTVQALQDSAGRFAGMVGAFCERLGWS 758
Query: 1210 DLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKA 1269
D+EGL +KFQ RVSFGV++EIV+LT IP+VK +RARAL+KAGLR+ AIAEAS+ EI+KA
Sbjct: 759 DMEGLFSKFQKRVSFGVKSEIVDLTEIPFVKAARARALFKAGLRSVHAIAEASLPEIIKA 818
Query: 1270 LFESSSWIAE--AQRRVQLGVAKKIKNGARKIVLEKAEEARIAAFSAFKSLGLNVPQFSR 1327
L+ + SW E AQ+ +QLGVA+ IKNGAR++ L++AEEAR AAFSA+++LG+ VP
Sbjct: 819 LYGNISWAGENRAQQWMQLGVARNIKNGARRLALDRAEEARAAAFSAYEALGVQVPA--- 875
Query: 1328 PILSTATENSTGEEEAATTAPRNDKSSSFIFPVPMEHSDKPSLEANQISKKVDLESAGEK 1387
+L+ + G EE A P SF HS +L + G+
Sbjct: 876 -MLALPMVGTLGNEEEALVNP----DISF-------HSTMKALTVD-----------GDP 912
Query: 1388 LLETSDNELSALVEGGSITELQQKFDAENPPVPFVGPGTGGVEFNVNASEIKIPDTTLSV 1447
E D +S+ V+GG T++ + + + NA IP +
Sbjct: 913 --EVKDVPISSEVKGGLATDINTSAKS--------------LVYVQNAQ--SIPGSPKKD 954
Query: 1448 QLGKNAIGTITSNRDL-DLEVQDRPNRDPCLVNKDRACNKGPINAINASGGFDCFLDRWE 1506
L K + + + VQ+ ++DP + D ++GP + GGFD FL RW+
Sbjct: 955 ILEKESDLLLQKLESIPSFRVQN--SKDP-ISTPDEVPSRGPRDVDKLVGGFDEFLRRWQ 1011
Query: 1507 ATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYG 1566
EF FD ++ + FE+ G+A+CW++SPVYYVNL H+
Sbjct: 1012 GVDEFAFDFYFRTPRKGLPDP-FEVMGVAICWKDSPVYYVNLS----IVHKSFQHATNPN 1066
Query: 1567 SSDKNVLTPEHQLEMI--KQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGG 1624
+K V+ E +I + RW+ +G ++ K VRK +W++K+Q+QVL + + +
Sbjct: 1067 CGNKEVIIREVNSSLIESQTRWRHVGTMLSKTGVRKISWDLKIQLQVLNNPGLHVP--SA 1124
Query: 1625 LNLVGTSLGLENV----GSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKK 1680
G+ +V G L S ID + +W+LWPD+E + +LE+EVKK
Sbjct: 1125 RQTTEHERGVPDVKAREGEVVALPSIRVQMPCIDTRVAAWLLWPDEESTRLLSLEQEVKK 1184
Query: 1681 RLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEI 1740
RL E AAAA R+GRW NQM AHNGCCRRVAQ L WKLLV+E L EALL +E+
Sbjct: 1185 RLPGEIAAAAGRAGRWANQMGCVAHNGCCRRVAQIWVLHCAFWKLLVAEGLHEALLQLEM 1244
Query: 1741 PLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLY 1800
PLV VLADME W +G+DM C +A++ L KLR LE + LAGM FSL A++A+VLY
Sbjct: 1245 PLVRVLADMETWSLGLDMRVCRKAQSHLHCKLRELEAQGEKLAGMSFSLSAPAEVAHVLY 1304
Query: 1801 GHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLAR 1860
HLKLP+P G KGK HPSTDK L+ LR+ HPI +IKEHR+L+KLL TLGSI + A+
Sbjct: 1305 RHLKLPVPPG-CKGKHHPSTDKQALEFLRNHHPIADIIKEHRSLSKLLQSTLGSIIAWAK 1363
Query: 1861 IS---MSTQK-------YTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGG 1910
S+Q+ +++ GHWLQTSTATGRLSME+PNLQCVEH V F + G
Sbjct: 1364 SPEPLFSSQERSSRGEIFSIAGHWLQTSTATGRLSMEDPNLQCVEHAVSFTIEGGRSLDG 1423
Query: 1911 NAEVDH--CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVF 1968
+ E + ++NAR F+PSQE WILL+ADYSQIELRLMAHFS DP+L+ LLS P GD+F
Sbjct: 1424 DQEKANNVVEVNARQAFVPSQEGWILLSADYSQIELRLMAHFSGDPSLVSLLSHPTGDLF 1483
Query: 1969 TMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSS 2028
++AA+WTG V ++R++TKRL+YGILYGMG NTL+E L C EA+ ++ FK +
Sbjct: 1484 RVLAAQWTGLPMCEVSDKQRERTKRLVYGILYGMGVNTLAEHLECPVAEAQVMLERFKGT 1543
Query: 2029 FPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAAD 2088
FP V +WL AV SC QKGY+ +L GRKR+L KI G E++KA+RQAVNSICQGSAAD
Sbjct: 1544 FPLVTTWLSHAVDSCRQKGYITTLSGRKRYLDKINTGKWGEQAKAERQAVNSICQGSAAD 1603
Query: 2089 IIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSL 2148
+IK+AMI +H I +++ Q G CRLLLQ+HDEL+LEVD V+K +
Sbjct: 1604 LIKLAMIKVHDAI-----------SSSHQ---GSCRLLLQIHDELLLEVDKRVLKHVAQI 1649
Query: 2149 VQKCMESAALLLVPLLVKIQVGSTWGSLEPFQAD 2182
++ ME A L VPL K+QVG++WGSL+ + D
Sbjct: 1650 LRSSMEGAITLRVPLRTKLQVGTSWGSLQLYTED 1683
>gi|222616936|gb|EEE53068.1| hypothetical protein OsJ_35810 [Oryza sativa Japonica Group]
Length = 2044
Score = 1417 bits (3669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 803/1376 (58%), Positives = 951/1376 (69%), Gaps = 110/1376 (7%)
Query: 1 MASGSPRTRIDQFYASKKRK--SRSPSVKSGRAEKDAKITVEVSP-SAKGTLDNYLKNSQ 57
MASGS R IDQF+ +KKR+ SR SG SP AKG+L+ YL S
Sbjct: 1 MASGSSRANIDQFFPAKKRRPSSRKDEPPSG------------SPRGAKGSLEGYLVRSP 48
Query: 58 DDGHTSKQSLLSRHEVVKRNLSLEIDKYSKDEKNQALLSDQAQPQATQKVISRCSSKEGN 117
+ SL+ + D R S +
Sbjct: 49 STAAAA---------------SLDSPRGGGDAAGA----------------RRSLSAAMD 77
Query: 118 SEVGCHMKDGSAHIPESLELKQFPTDFLSL--YCSEIHSSASSPSEAKL-KDHKRHSSPS 174
+VG H A ELK+F +FLSL YCS I S S + K KR + S
Sbjct: 78 VDVG-HPATAVATDEGDFELKRFAMEFLSLSHYCSVIPSVMGGASNGEAGKQQKRSAIQS 136
Query: 175 LLGGEDNKIAKKKYCVSNLLQSGEQTTCSNAKNIEETQSGFIVKTGNLVPNSSQRVTDSN 234
L N AKK+ +++ ++E + +V G+ P + T
Sbjct: 137 FLAPCSNASAKKQ-------------RVAHSGDLEALK---VVDVGHKTPFREKCGTQYG 180
Query: 235 ASLLLQASLRKCDKSSKSTLNTTAC-YTPEPSIVKTYVR------ETPKSTCGNSIFSPG 287
L+ SS+ + C +TP + ETP S NS+ SPG
Sbjct: 181 GPEALEELGEGTKLSSEGFVALQRCSFTPNTGQKRVGFSTAPGAGETPMSVSTNSLISPG 240
Query: 288 EAFWNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNEINNSYNLRNKNYNKSKEMLNEGD 347
E FWN AIE ADG A + GP + E D KS + + ++ N + N
Sbjct: 241 EEFWNAAIEFADGISARAEKGPGR-PECDVDDKSSCAVALCSKILPRSGNGGSDHENTVG 299
Query: 348 SKVQHIKAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFEDK----NLKGTKPGCGAADTS 403
S S K+ + SPLP+KHLDF ED+ LK + G GA D S
Sbjct: 300 SNETKQMDRSSYKEEPVAANNHHVNSSPLPVKHLDFFHEDEIQVPGLKIEEKG-GAVDLS 358
Query: 404 EAMMFRDGVVSEKGSVTHK--SCQKIKFKCHHDNTSR----------TEG---ISDVQEK 448
+ ++ + ++TH + K F H D+++ TEG + V +
Sbjct: 359 QKSQMKN-----RENLTHSVDNVNKSTFDMHIDSSATIHDECLSKLTTEGKNHPTRVGDS 413
Query: 449 DSVLIVHE-RKLDISSQGIDSITSD--SPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDL 505
S L + +L S + + SD P+ +++ EA TP+SS KD L
Sbjct: 414 GSCLTRRDLNQLIYSEDKLLTAYSDHGKPSKDCTNKFASQEM-EANTPTSSVPQKDHSKL 472
Query: 506 SSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRR 565
SSWLP E+C+IY K+GI +LYPWQVECL V+GVL++RNLVYCASTSAGKSFVAEILMLRR
Sbjct: 473 SSWLPPELCAIYMKKGIPELYPWQVECLLVEGVLEKRNLVYCASTSAGKSFVAEILMLRR 532
Query: 566 LISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIE 625
++ +GKMA+LVLPYVSICAEKAEHLE LLEPLGRHVRS+YGNQGGGSLPKDTSVAVCTIE
Sbjct: 533 ILFSGKMAILVLPYVSICAEKAEHLEQLLEPLGRHVRSFYGNQGGGSLPKDTSVAVCTIE 592
Query: 626 KANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGE 685
KANSLVN++LEEGRLSE+GIIVIDELHMV DQ+RGYLLEL+LTKLRYAAGEG S+SSSGE
Sbjct: 593 KANSLVNKLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGNSESSSGE 652
Query: 686 NSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS 745
SG+SSGK D HGLQI+GMSATMPNVAAVADWLQAALY+T FRPVPLEE+IKVGN ++
Sbjct: 653 ISGSSSGKMDATHGLQIIGMSATMPNVAAVADWLQAALYQTEFRPVPLEEFIKVGNQVFD 712
Query: 746 KKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKK 805
K M+VVR + A+LGGKDPDHIVELC+EVVQ+GHSVL+FCSSRKGCESTARHV+KFLK
Sbjct: 713 KDMNVVRVLPKVADLGGKDPDHIVELCNEVVQQGHSVLLFCSSRKGCESTARHVAKFLKV 772
Query: 806 FSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCY 865
S+ SEF D T A++AL+R P+GLDPVLEETLPSGVAYHHAGLTVEERE+VETCY
Sbjct: 773 ASVGSSDVGSEFPDATFAVEALKRSPSGLDPVLEETLPSGVAYHHAGLTVEEREIVETCY 832
Query: 866 RKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGES 925
RKGLVRVL ATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY+QM+GRAGRTGIDTKGES
Sbjct: 833 RKGLVRVLAATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMSGRAGRTGIDTKGES 892
Query: 926 MLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCT 985
+L+CKPEEVK+I G+L +C PL SCLSEDKNGMTHAI+EVVAGGIVQTA DIHRYVRCT
Sbjct: 893 ILVCKPEEVKRITGILRSNCTPLESCLSEDKNGMTHAIMEVVAGGIVQTASDIHRYVRCT 952
Query: 986 LLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVL 1045
LLNSTKPF+DVVKSAQDSLRWLCH++FLEWN +TK+YSTTPLG AAFGSSL PEESL+VL
Sbjct: 953 LLNSTKPFEDVVKSAQDSLRWLCHKRFLEWNNETKIYSTTPLGLAAFGSSLNPEESLVVL 1012
Query: 1046 DDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPY 1105
DDLSRAREGFVLA DLHLVYL TPINV+VEPDWELYYERF++L++L+QSVGN+VGV EP+
Sbjct: 1013 DDLSRAREGFVLACDLHLVYLVTPINVDVEPDWELYYERFMQLTSLEQSVGNRVGVIEPF 1072
Query: 1106 LMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRL 1165
LM MAHGA M + K + + G+ + R + N L + Q LRV KRFYVAL+LSRL
Sbjct: 1073 LMHMAHGAAMPVRGKPQRA--GIRNRSPTR--GSGGNALINEQALRVSKRFYVALMLSRL 1128
Query: 1166 VQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFG 1225
QE PV +VCE FKVARGM+QALQENAGRFASMVSVFC+RLGW+DLEGL+AKFQNRV FG
Sbjct: 1129 AQEIPVTDVCEAFKVARGMIQALQENAGRFASMVSVFCQRLGWHDLEGLVAKFQNRVCFG 1188
Query: 1226 VRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQ---R 1282
VRAEI ELT+IP+VKGSRARALYK+GLRTP+AIAEASI EI KALFESS+W + R
Sbjct: 1189 VRAEIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIPEIAKALFESSTWSGQGDSGLR 1248
Query: 1283 RVQLGVAKKIKNGARKIVLEKAEEARIAAFSAFKSLGLNVPQFSRPILSTATENST 1338
R+QLG+AKKIKNGARKIVLE+AE AR+AAFSAFKSLG+ VPQF+ P+L T E T
Sbjct: 1249 RMQLGIAKKIKNGARKIVLEEAEAARVAAFSAFKSLGVQVPQFTTPLLPTIDEPPT 1304
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/723 (56%), Positives = 509/723 (70%), Gaps = 61/723 (8%)
Query: 1446 SVQLGKNAIGTITSNRDLDLEVQDRPNRDPCLVNKDRACNKGPINAINASGGFDCFLDRW 1505
S+Q+ ++A I +N ++ ++V + + L +++ A +KGP+NA N GGFD FLD+W
Sbjct: 1346 SIQITESA--RIVNNANIVVQVASPFSIETKLSSRNVA-DKGPVNAYNFPGGFDSFLDQW 1402
Query: 1506 EATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIY 1565
EF FD+HY K S +S F+I GLAVCWENSPVYY N PKDL ++
Sbjct: 1403 STVSEFSFDLHYVKKSIKSSSTYFDILGLAVCWENSPVYYCNFPKDL----------MMA 1452
Query: 1566 GSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGL 1625
GS+D + E + +RW R+ EIM + V+K TWN+K QIQ LK+ VS QR L
Sbjct: 1453 GSNDSIEMWDE-----LTRRWNRVIEIMRQNSVKKMTWNLKFQIQALKYPCVSCQRLSRL 1507
Query: 1626 NLVGTSL-GLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSS 1684
+L L +E + + ++ L PV + G+D+C+V+W+LWPD+E + PNLEK VK+RL +
Sbjct: 1508 HLDYKMLKNVEVLDNLYVFLQPVSVHSGLDICLVAWVLWPDEESKTVPNLEKLVKRRLHN 1567
Query: 1685 EAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVN 1744
EAAAAANR GRW+NQM +AAHNGCCRR AQTRALCSVL KLLVS+ L + L IE PLVN
Sbjct: 1568 EAAAAANRDGRWRNQMHKAAHNGCCRRAAQTRALCSVLRKLLVSQNLNDLLETIEGPLVN 1627
Query: 1745 VLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLK 1804
VLADMELWGIG DM+ CL+AR+++ +KL+ LEK+AY LAG FSL ADIA+VLY HLK
Sbjct: 1628 VLADMELWGIGADMDACLRARHIIIRKLKELEKEAYKLAGKSFSLNATADIADVLYTHLK 1687
Query: 1805 LPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMS 1864
LP+P+G KGK HPSTDK LD LR +HPI+ VIKEHRTLAKLLN TLGSICS A++
Sbjct: 1688 LPVPKGCGKGKLHPSTDKQSLDHLRDQHPIISVIKEHRTLAKLLNGTLGSICSRAQLCSK 1747
Query: 1865 TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDF 1924
+Q+Y + G+WLQTSTATGRLSMEEPNL
Sbjct: 1748 SQRYIIQGNWLQTSTATGRLSMEEPNL--------------------------------- 1774
Query: 1925 FIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVG 1984
QENW+L+ ADYSQIELRLMAHFSKD ALI LLSKP GDVFTMIA+RWTG++E +
Sbjct: 1775 ----QENWLLVTADYSQIELRLMAHFSKDTALIELLSKPDGDVFTMIASRWTGKAESLIC 1830
Query: 1985 SQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCH 2044
S+ER+ TKR IYGILYGMG N+L+EQL CS +A +KI+SFK FPGV+SWLH AV+SC
Sbjct: 1831 SKERETTKRFIYGILYGMGANSLAEQLECSPEDAAQKIQSFKRFFPGVSSWLHEAVASCR 1890
Query: 2045 QKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSII--- 2101
KGYVE+L GR+RFLSKI GN+KEK+KAQRQAVNSICQGSAADIIK+AMI +HS I
Sbjct: 1891 HKGYVETLMGRRRFLSKITAGNSKEKAKAQRQAVNSICQGSAADIIKVAMIKVHSAITNG 1950
Query: 2102 --VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALL 2159
VG NF ++GRC L+LQVHDELVLEVDP ++ EAV L+Q ME++A L
Sbjct: 1951 STVGATVDSIDVAMQNFSEIRGRCHLILQVHDELVLEVDPCMVAEAVRLLQTVMENSASL 2010
Query: 2160 LVP 2162
L P
Sbjct: 2011 LGP 2013
>gi|218186696|gb|EEC69123.1| hypothetical protein OsI_38041 [Oryza sativa Indica Group]
Length = 1986
Score = 1411 bits (3653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 803/1373 (58%), Positives = 946/1373 (68%), Gaps = 124/1373 (9%)
Query: 1 MASGSPRTRIDQFYASKKRK--SRSPSVKSGRAEKDAKITVEVSP-SAKGTLDNYLKNSQ 57
MASGS R IDQF+ +KKR+ SR SG SP AKG+L+ YL S
Sbjct: 1 MASGSSRANIDQFFPAKKRRPSSRKDEPPSG------------SPRGAKGSLEGYLVRSP 48
Query: 58 DDGHTSKQSLLSRHEVVKRNLSLEIDKYSKDEKNQALLSDQAQPQATQKVISRCSSKEGN 117
+ SL+ + D R S +
Sbjct: 49 STAAAA---------------SLDSPRGGGDAAGA----------------RRSLSAAMD 77
Query: 118 SEVGCHMKDGSAHIPESLELKQFPTDFLSL--YCSEIHSSASSPSEAKL-KDHKRHSSPS 174
+VG H A ELK+F +FLSL YCS I S S + K KR + S
Sbjct: 78 VDVG-HPATAVATDEGDFELKRFAMEFLSLSHYCSVIPSVMGGASNGEAGKQQKRSAIQS 136
Query: 175 LLGGEDNKIAKKKYCV-SNLLQSGEQTTCSNAKNIEE---TQSGFIVKTGNLVPNSSQRV 230
L N AKK+ S L++ + + E TQ G + + PN+ Q+
Sbjct: 137 FLAPCSNASAKKQRVAHSGDLEALKVVDVGHKTPFREKCGTQYGG-PEAWSFTPNTGQKR 195
Query: 231 TDSNASLLLQASLRKCDKSSKSTLNTTACYTPEPSIVKTYVRETPKSTCGNSIFSPGEAF 290
++ P ETP S NS+ SPGE F
Sbjct: 196 VG---------------------------FSTAPG-----AGETPMSVSTNSLISPGEEF 223
Query: 291 WNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNEINNSYNLRNKNYNKSKEMLNEGDSKV 350
WN AIE ADG A + GP + E AD KS + + ++ N + N S
Sbjct: 224 WNAAIEFADGISARAEKGPGR-PECDADDKSSCAVALCSKILPRSGNGGSDHENTVGSNE 282
Query: 351 QHIKAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFEDK----NLKGTKPGCGAADTSEAM 406
S K+ + SPLP+KHLDF ED+ LK + G GA D S
Sbjct: 283 TKQMDRSSYKEEPVAANNHHVNSSPLPVKHLDFFHEDEIQVPGLKIEEKG-GAVDLSPKS 341
Query: 407 MFRDGVVSEKGSVTHK--SCQKIKFKCHHDNTSR----------TEG---ISDVQEKDSV 451
++ + ++TH + K F H D+++ TEG + V + S
Sbjct: 342 QMKN-----RENLTHSVDNVNKSTFDMHIDSSATIHDECLSKLTTEGKNHPTRVGDSGSC 396
Query: 452 LIVHE-RKLDISSQGIDSITSD--SPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSW 508
L + +L S + + SD P+ +++ EA TP+SS KD LSSW
Sbjct: 397 LTRRDLNQLIYSEDKLLTAYSDHGKPSKDCTNKFASQEM-EANTPTSSVPQKDHSKLSSW 455
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLIS 568
LP E+C+IY K+GI +LYPWQVECL V+GVL++RNLVYCASTSAGKSFVAEILMLRR++
Sbjct: 456 LPPELCAIYMKKGIPELYPWQVECLLVEGVLEKRNLVYCASTSAGKSFVAEILMLRRILF 515
Query: 569 TGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKAN 628
+GKMA+LVLPYVSICAEKAEHLE LLEPLGRHVRS+YGNQGGGSLPKDTSVAVCTIEKAN
Sbjct: 516 SGKMAILVLPYVSICAEKAEHLEQLLEPLGRHVRSFYGNQGGGSLPKDTSVAVCTIEKAN 575
Query: 629 SLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSG 688
SLVN++LEEGRLSE+GIIVIDELHMV DQ+RGYLLEL+LTKLRYAAGEG S+SSSGE SG
Sbjct: 576 SLVNKLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGNSESSSGEISG 635
Query: 689 TSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKM 748
+SSGK D HGLQI+GMSATMPNVAAVADWLQAALY+T FRPVPLEE+IKVGN ++ K M
Sbjct: 636 SSSGKMDATHGLQIIGMSATMPNVAAVADWLQAALYQTEFRPVPLEEFIKVGNQVFDKDM 695
Query: 749 DVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSI 808
+VVR + A+LGGKDPDHIVELC+EVVQ+GHSVL+FCSSRKGCESTARHV+KFLK S+
Sbjct: 696 NVVRVLPKVADLGGKDPDHIVELCNEVVQQGHSVLLFCSSRKGCESTARHVAKFLKVASV 755
Query: 809 NVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKG 868
SEF D T A++AL+R P+GLDPVLEETLPSGVAYHHAGLTVEERE+VETCYRKG
Sbjct: 756 GSSDVGSEFPDATFAVEALKRSPSGLDPVLEETLPSGVAYHHAGLTVEEREIVETCYRKG 815
Query: 869 LVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLI 928
LVRVL ATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY+QM+GRAGRTGIDTKGES+L+
Sbjct: 816 LVRVLAATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMSGRAGRTGIDTKGESILV 875
Query: 929 CKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLN 988
CKPEEVK+I G+L +C PL SCLSEDKNGMTHAI+EVVAGGIVQTA DIHRYVRCTLLN
Sbjct: 876 CKPEEVKRITGILRSNCTPLESCLSEDKNGMTHAIMEVVAGGIVQTASDIHRYVRCTLLN 935
Query: 989 STKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDL 1048
STKPF+DVVKSAQDSLRWLCH++FLEWN +TK+YSTTPLG AAFGSSL PEESL+VLDDL
Sbjct: 936 STKPFEDVVKSAQDSLRWLCHKRFLEWNNETKIYSTTPLGLAAFGSSLNPEESLVVLDDL 995
Query: 1049 SRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMR 1108
SRAREGFVLA DLHLVYL TPINV+VEPDWELYYERF++L++L+QSVGN+VGV EP+LM
Sbjct: 996 SRAREGFVLACDLHLVYLVTPINVDVEPDWELYYERFMQLTSLEQSVGNRVGVIEPFLMH 1055
Query: 1109 MAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQE 1168
MAHGA M + K + + G+ + R + N L + Q LRV KRFYVAL+LSRL QE
Sbjct: 1056 MAHGAAMPVRGKPQRA--GIRNRSPTR--GSGGNALINEQALRVSKRFYVALMLSRLAQE 1111
Query: 1169 TPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRA 1228
PV +VCE FKVARGM+QALQENAGRFASMVSVFC+RLGW+DLEGL+AKFQNRV FGVRA
Sbjct: 1112 IPVTDVCEAFKVARGMIQALQENAGRFASMVSVFCQRLGWHDLEGLVAKFQNRVCFGVRA 1171
Query: 1229 EIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQ---RRVQ 1285
EI ELT+IP+VKGSRARALYK+GLRTP+AIAEASI EI KALFESS+W + RR+Q
Sbjct: 1172 EIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIPEIAKALFESSTWSGQGDSGLRRMQ 1231
Query: 1286 LGVAKKIKNGARKIVLEKAEEARIAAFSAFKSLGLNVPQFSRPILSTATENST 1338
LG+AKKIKNGARKIVLE+AE AR+AAFSAFKSLG+ VPQF+ P+L T E T
Sbjct: 1232 LGIAKKIKNGARKIVLEEAEAARVAAFSAFKSLGVQVPQFTTPLLPTIDEPPT 1284
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/723 (52%), Positives = 476/723 (65%), Gaps = 99/723 (13%)
Query: 1446 SVQLGKNAIGTITSNRDLDLEVQDRPNRDPCLVNKDRACNKGPINAINASGGFDCFLDRW 1505
S+Q+ ++A I +N ++ ++V + + L +++ A +KGP+NA N GGFD FLD+W
Sbjct: 1326 SIQITESA--RIVNNANIVVQVASPFSIETKLSSRNVA-DKGPVNAYNFPGGFDSFLDQW 1382
Query: 1506 EATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIY 1565
EF FD+HY K S +S F+I GLAVCWENSPVYY N PKDL ++
Sbjct: 1383 STVSEFSFDLHYVKKSIKSSSTYFDILGLAVCWENSPVYYCNFPKDL----------MMA 1432
Query: 1566 GSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGL 1625
GS+D + E + +RW R+ EIM + V+K TWN+K QIQ LK+ VS QR L
Sbjct: 1433 GSNDSIEMWDE-----LTRRWNRVIEIMRQNSVKKMTWNLKFQIQALKYPCVSCQRLSRL 1487
Query: 1626 NLVGTSL-GLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSS 1684
+L L +E + + ++ L PV + G+D+C+V+W+LWPD+E + PNLEK
Sbjct: 1488 HLDYKMLKNVEVLDNLYVFLQPVSVHSGLDICLVAWVLWPDEESKTVPNLEK-------- 1539
Query: 1685 EAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVN 1744
TRALCSVL KLLVS+ L + L IE PLVN
Sbjct: 1540 ------------------------------TRALCSVLRKLLVSQNLNDLLETIEGPLVN 1569
Query: 1745 VLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLK 1804
VLADMELWGIG DM+ CL+AR+++ +KL+ LEK+AY LAG FSL ADIA+VLY HLK
Sbjct: 1570 VLADMELWGIGADMDACLRARHIIIRKLKELEKEAYKLAGKSFSLNATADIADVLYTHLK 1629
Query: 1805 LPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMS 1864
LP+P+G KGK HPSTDK LD LR +HPI+ VIKEHRTLAKLLN TLGSICS A++
Sbjct: 1630 LPVPKGCGKGKLHPSTDKQSLDHLRDQHPIISVIKEHRTLAKLLNGTLGSICSRAQLCSK 1689
Query: 1865 TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDF 1924
+Q+Y + G+WLQTSTATGRLSMEEPNLQ
Sbjct: 1690 SQRYIIQGNWLQTSTATGRLSMEEPNLQ-------------------------------- 1717
Query: 1925 FIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVG 1984
ENW+L+ ADYSQIELRLMAHFSKD ALI LLSKP GDVFTMIA+RWTG++E +
Sbjct: 1718 -----ENWLLVTADYSQIELRLMAHFSKDTALIELLSKPDGDVFTMIASRWTGKAESLIC 1772
Query: 1985 SQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCH 2044
S+ER+ TKR IYGILYGMG N+L+EQL CS +A +KI+SFK FPGV+SWLH AV+SC
Sbjct: 1773 SKERETTKRFIYGILYGMGANSLAEQLECSPEDAAQKIQSFKRFFPGVSSWLHEAVASCR 1832
Query: 2045 QKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSII--- 2101
KGYVE+L GR+RFLSKI GN+KEK+KAQRQAVNSICQGSAADIIK+AMI +HS I
Sbjct: 1833 HKGYVETLMGRRRFLSKITAGNSKEKAKAQRQAVNSICQGSAADIIKVAMIKVHSAITNG 1892
Query: 2102 --VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALL 2159
VG NF ++GRC L+LQVHDELVLEVDP ++ EAV L+Q ME++A L
Sbjct: 1893 STVGATVDSIDVAMQNFSEIRGRCHLILQVHDELVLEVDPCMVAEAVRLLQTVMENSASL 1952
Query: 2160 LVP 2162
L P
Sbjct: 1953 LGP 1955
>gi|108862506|gb|ABA97168.2| DNA polymerase I family protein, expressed [Oryza sativa Japonica
Group]
Length = 2065
Score = 1399 bits (3621), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 803/1397 (57%), Positives = 951/1397 (68%), Gaps = 131/1397 (9%)
Query: 1 MASGSPRTRIDQFYASKKRK--SRSPSVKSGRAEKDAKITVEVSP-SAKGTLDNYLKNSQ 57
MASGS R IDQF+ +KKR+ SR SG SP AKG+L+ YL S
Sbjct: 1 MASGSSRANIDQFFPAKKRRPSSRKDEPPSG------------SPRGAKGSLEGYLVRSP 48
Query: 58 DDGHTSKQSLLSRHEVVKRNLSLEIDKYSKDEKNQALLSDQAQPQATQKVISRCSSKEGN 117
+ SL+ + D R S +
Sbjct: 49 STAAAA---------------SLDSPRGGGDAAGA----------------RRSLSAAMD 77
Query: 118 SEVGCHMKDGSAHIPESLELKQFPTDFLSL--YCSEIHSSASSPSEAKL-KDHKRHSSPS 174
+VG H A ELK+F +FLSL YCS I S S + K KR + S
Sbjct: 78 VDVG-HPATAVATDEGDFELKRFAMEFLSLSHYCSVIPSVMGGASNGEAGKQQKRSAIQS 136
Query: 175 LLGGEDNKIAKKKYCVSNLLQSGEQTTCSNAKNIEETQSGFIVKTGNLVPNSSQRVTDSN 234
L N AKK+ +++ ++E + +V G+ P + T
Sbjct: 137 FLAPCSNASAKKQ-------------RVAHSGDLEALK---VVDVGHKTPFREKCGTQYG 180
Query: 235 ASLLLQASLRKCDKSSKSTLNTTAC-YTPEPSIVKTYVR------ETPKSTCGNSIFSPG 287
L+ SS+ + C +TP + ETP S NS+ SPG
Sbjct: 181 GPEALEELGEGTKLSSEGFVALQRCSFTPNTGQKRVGFSTAPGAGETPMSVSTNSLISPG 240
Query: 288 EAFWNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNEINNSYNLRNKNYNKSKEMLNEGD 347
E FWN AIE ADG A + GP + E D KS + + ++ N + N
Sbjct: 241 EEFWNAAIEFADGISARAEKGPGR-PECDVDDKSSCAVALCSKILPRSGNGGSDHENTVG 299
Query: 348 SKVQHIKAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFEDK----NLKGTKPGCGAADTS 403
S S K+ + SPLP+KHLDF ED+ LK + G GA D S
Sbjct: 300 SNETKQMDRSSYKEEPVAANNHHVNSSPLPVKHLDFFHEDEIQVPGLKIEEKG-GAVDLS 358
Query: 404 EAMMFRDGVVSEKGSVTHK--SCQKIKFKCHHDNTSR----------TEG---ISDVQEK 448
+ ++ + ++TH + K F H D+++ TEG + V +
Sbjct: 359 QKSQMKN-----RENLTHSVDNVNKSTFDMHIDSSATIHDECLSKLTTEGKNHPTRVGDS 413
Query: 449 DSVLIVHE-RKLDISSQGIDSITSD--SPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDL 505
S L + +L S + + SD P+ +++ EA TP+SS KD L
Sbjct: 414 GSCLTRRDLNQLIYSEDKLLTAYSDHGKPSKDCTNKFASQEM-EANTPTSSVPQKDHSKL 472
Query: 506 SSWLPSEICSIYKKRGISKLYPWQ-------------VECLHVDGVLQRRNLVYCASTSA 552
SSWLP E+C+IY K+GI +LYPWQ VECL V+GVL++RNLVYCASTSA
Sbjct: 473 SSWLPPELCAIYMKKGIPELYPWQIELITNPKNLFQLVECLLVEGVLEKRNLVYCASTSA 532
Query: 553 GKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGS 612
GKSFVAEILMLRR++ +GKMA+LVLPYVSICAEKAEHLE LLEPLGRHVRS+YGNQGGGS
Sbjct: 533 GKSFVAEILMLRRILFSGKMAILVLPYVSICAEKAEHLEQLLEPLGRHVRSFYGNQGGGS 592
Query: 613 LPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRY 672
LPKDTSVAVCTIEKANSLVN++LEEGRLSE+GIIVIDELHMV DQ+RGYLLEL+LTKLRY
Sbjct: 593 LPKDTSVAVCTIEKANSLVNKLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRY 652
Query: 673 AAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQ--------AALY 724
AAGEG S+SSSGE SG+SSGK D HGLQI+GMSATMPNVAAVADWLQ AALY
Sbjct: 653 AAGEGNSESSSGEISGSSSGKMDATHGLQIIGMSATMPNVAAVADWLQKDEEFTAQAALY 712
Query: 725 ETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLI 784
+T FRPVPLEE+IKVGN ++ K M+VVR + A+LGGKDPDHIVELC+EVVQ+GHSVL+
Sbjct: 713 QTEFRPVPLEEFIKVGNQVFDKDMNVVRVLPKVADLGGKDPDHIVELCNEVVQQGHSVLL 772
Query: 785 FCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPS 844
FCSSRKGCESTARHV+KFLK S+ SEF D T A++AL+R P+GLDPVLEETLPS
Sbjct: 773 FCSSRKGCESTARHVAKFLKVASVGSSDVGSEFPDATFAVEALKRSPSGLDPVLEETLPS 832
Query: 845 GVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDG 904
GVAYHHAGLTVEERE+VETCYRKGLVRVL ATSTLAAGVNLPARRVIFRQPRIGRDFIDG
Sbjct: 833 GVAYHHAGLTVEEREIVETCYRKGLVRVLAATSTLAAGVNLPARRVIFRQPRIGRDFIDG 892
Query: 905 TRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAIL 964
TRY+QM+GRAGRTGIDTKGES+L+CKPEEVK+I G+L +C PL SCLSEDKNGMTHAI+
Sbjct: 893 TRYKQMSGRAGRTGIDTKGESILVCKPEEVKRITGILRSNCTPLESCLSEDKNGMTHAIM 952
Query: 965 EVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYST 1024
EVVAGGIVQTA DIHRYVRCTLLNSTKPF+DVVKSAQDSLRWLCH++FLEWN +TK+YST
Sbjct: 953 EVVAGGIVQTASDIHRYVRCTLLNSTKPFEDVVKSAQDSLRWLCHKRFLEWNNETKIYST 1012
Query: 1025 TPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYER 1084
TPLG AAFGSSL PEESL+VLDDLSRAREGFVLA DLHLVYL TPINV+VEPDWELYYER
Sbjct: 1013 TPLGLAAFGSSLNPEESLVVLDDLSRAREGFVLACDLHLVYLVTPINVDVEPDWELYYER 1072
Query: 1085 FLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNML 1144
F++L++L+QSVGN+VGV EP+LM MAHGA M + K + + G+ + R + N L
Sbjct: 1073 FMQLTSLEQSVGNRVGVIEPFLMHMAHGAAMPVRGKPQRA--GIRNRSPTR--GSGGNAL 1128
Query: 1145 SDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCE 1204
+ Q LRV KRFYVAL+LSRL QE PV +VCE FKVARGM+QALQENAGRFASMVSVFC+
Sbjct: 1129 INEQALRVSKRFYVALMLSRLAQEIPVTDVCEAFKVARGMIQALQENAGRFASMVSVFCQ 1188
Query: 1205 RLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIS 1264
RLGW+DLEGL+AKFQNRV FGVRAEI ELT+IP+VKGSRARALYK+GLRTP+AIAEASI
Sbjct: 1189 RLGWHDLEGLVAKFQNRVCFGVRAEIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIP 1248
Query: 1265 EIVKALFESSSWIAEAQ---RRVQLGVAKKIKNGARKIVLEKAEEARIAAFSAFKSLGLN 1321
EI KALFESS+W + RR+QLG+AKKIKNGARKIVLE+AE AR+AAFSAFKSLG+
Sbjct: 1249 EIAKALFESSTWSGQGDSGLRRMQLGIAKKIKNGARKIVLEEAEAARVAAFSAFKSLGVQ 1308
Query: 1322 VPQFSRPILSTATENST 1338
VPQF+ P+L T E T
Sbjct: 1309 VPQFTTPLLPTIDEPPT 1325
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/723 (56%), Positives = 509/723 (70%), Gaps = 61/723 (8%)
Query: 1446 SVQLGKNAIGTITSNRDLDLEVQDRPNRDPCLVNKDRACNKGPINAINASGGFDCFLDRW 1505
S+Q+ ++A I +N ++ ++V + + L +++ A +KGP+NA N GGFD FLD+W
Sbjct: 1367 SIQITESA--RIVNNANIVVQVASPFSIETKLSSRNVA-DKGPVNAYNFPGGFDSFLDQW 1423
Query: 1506 EATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIY 1565
EF FD+HY K S +S F+I GLAVCWENSPVYY N PKDL ++
Sbjct: 1424 STVSEFSFDLHYVKKSIKSSSTYFDILGLAVCWENSPVYYCNFPKDL----------MMA 1473
Query: 1566 GSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGL 1625
GS+D + E + +RW R+ EIM + V+K TWN+K QIQ LK+ VS QR L
Sbjct: 1474 GSNDSIEMWDE-----LTRRWNRVIEIMRQNSVKKMTWNLKFQIQALKYPCVSCQRLSRL 1528
Query: 1626 NLVGTSL-GLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSS 1684
+L L +E + + ++ L PV + G+D+C+V+W+LWPD+E + PNLEK VK+RL +
Sbjct: 1529 HLDYKMLKNVEVLDNLYVFLQPVSVHSGLDICLVAWVLWPDEESKTVPNLEKLVKRRLHN 1588
Query: 1685 EAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVN 1744
EAAAAANR GRW+NQM +AAHNGCCRR AQTRALCSVL KLLVS+ L + L IE PLVN
Sbjct: 1589 EAAAAANRDGRWRNQMHKAAHNGCCRRAAQTRALCSVLRKLLVSQNLNDLLETIEGPLVN 1648
Query: 1745 VLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLK 1804
VLADMELWGIG DM+ CL+AR+++ +KL+ LEK+AY LAG FSL ADIA+VLY HLK
Sbjct: 1649 VLADMELWGIGADMDACLRARHIIIRKLKELEKEAYKLAGKSFSLNATADIADVLYTHLK 1708
Query: 1805 LPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMS 1864
LP+P+G KGK HPSTDK LD LR +HPI+ VIKEHRTLAKLLN TLGSICS A++
Sbjct: 1709 LPVPKGCGKGKLHPSTDKQSLDHLRDQHPIISVIKEHRTLAKLLNGTLGSICSRAQLCSK 1768
Query: 1865 TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDF 1924
+Q+Y + G+WLQTSTATGRLSMEEPNL
Sbjct: 1769 SQRYIIQGNWLQTSTATGRLSMEEPNL--------------------------------- 1795
Query: 1925 FIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVG 1984
QENW+L+ ADYSQIELRLMAHFSKD ALI LLSKP GDVFTMIA+RWTG++E +
Sbjct: 1796 ----QENWLLVTADYSQIELRLMAHFSKDTALIELLSKPDGDVFTMIASRWTGKAESLIC 1851
Query: 1985 SQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCH 2044
S+ER+ TKR IYGILYGMG N+L+EQL CS +A +KI+SFK FPGV+SWLH AV+SC
Sbjct: 1852 SKERETTKRFIYGILYGMGANSLAEQLECSPEDAAQKIQSFKRFFPGVSSWLHEAVASCR 1911
Query: 2045 QKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSII--- 2101
KGYVE+L GR+RFLSKI GN+KEK+KAQRQAVNSICQGSAADIIK+AMI +HS I
Sbjct: 1912 HKGYVETLMGRRRFLSKITAGNSKEKAKAQRQAVNSICQGSAADIIKVAMIKVHSAITNG 1971
Query: 2102 --VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALL 2159
VG NF ++GRC L+LQVHDELVLEVDP ++ EAV L+Q ME++A L
Sbjct: 1972 STVGATVDSIDVAMQNFSEIRGRCHLILQVHDELVLEVDPCMVAEAVRLLQTVMENSASL 2031
Query: 2160 LVP 2162
L P
Sbjct: 2032 LGP 2034
>gi|357436375|ref|XP_003588463.1| Helicase and polymerase containing protein TEBICHI [Medicago
truncatula]
gi|355477511|gb|AES58714.1| Helicase and polymerase containing protein TEBICHI [Medicago
truncatula]
Length = 1064
Score = 1168 bits (3022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1032 (60%), Positives = 742/1032 (71%), Gaps = 125/1032 (12%)
Query: 714 AVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCD 773
A ++ ++AALY+T FRPVPLEEYIKVGN+IY+K M++ RTI A+LGGKDPDH+VELC+
Sbjct: 98 ASSNCIKAALYQTEFRPVPLEEYIKVGNSIYNKSMELSRTIPKGADLGGKDPDHVVELCN 157
Query: 774 EV-------------------------VQEGHSVLIFCSSRKGCESTARHVSKFLKKFSI 808
EV VQEG SVLIFCSSRKGCEST RHV+KFLK F++
Sbjct: 158 EVRNLKSQSHFLHLVIFQDEQLIFFQVVQEGQSVLIFCSSRKGCESTGRHVAKFLKSFTV 217
Query: 809 NVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKG 868
+++ ++ EF DITSAI++LR+CPAGLDPVLEET P+GVA+HHAGLTVEERE+VETCYRK
Sbjct: 218 DINENNCEFADITSAINSLRKCPAGLDPVLEETFPAGVAFHHAGLTVEEREIVETCYRKD 277
Query: 869 LVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLI 928
L+RVLTATSTLAAGVN PARRVIFRQPRIG DFIDGTRY QMAGR ++I
Sbjct: 278 LLRVLTATSTLAAGVNPPARRVIFRQPRIGCDFIDGTRYMQMAGR------------VVI 325
Query: 929 CKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLN 988
CKP+E+KK+MGLLNESCPPLHSCLSED NGM HAILEVVAGGIVQT DIHRYVRCTLLN
Sbjct: 326 CKPQELKKVMGLLNESCPPLHSCLSEDLNGMIHAILEVVAGGIVQTTNDIHRYVRCTLLN 385
Query: 989 STKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDL 1048
STKPF DV+KSAQ+SLRWLC RKFLEWNEDTKLYSTTPLGRA+FGSSLCPEESLIVL DL
Sbjct: 386 STKPFLDVIKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGRASFGSSLCPEESLIVLADL 445
Query: 1049 SRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMR 1108
SR REGFVLASDLHLVYL TPINV+VEPDWE YYERF++LS LDQSVGN+VGV+EP+LMR
Sbjct: 446 SREREGFVLASDLHLVYLVTPINVDVEPDWESYYERFVKLSPLDQSVGNRVGVTEPFLMR 505
Query: 1109 MAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQE 1168
MAHG P+ S+K R S + K + + G++S + SD QTLRVC+RFYVALILS LVQE
Sbjct: 506 MAHGVPVG-SNKSRWS----NNKRQNQHGMSSGIVNSDDQTLRVCRRFYVALILSLLVQE 560
Query: 1169 TPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRA 1228
TPV EVCETFKVARGMVQ LQENAGRFASMV+VFCERLGW+D E A
Sbjct: 561 TPVGEVCETFKVARGMVQGLQENAGRFASMVAVFCERLGWHDFE---------------A 605
Query: 1229 EIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAE--AQRRVQL 1286
E+VELTTIPYVKGSRARALYKAGLRTPLAIAEASI E+VKALFESSSW E AQR +Q
Sbjct: 606 EVVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPELVKALFESSSWGTEGSAQRSLQF 665
Query: 1287 GVAKKIKNGARKIVLEKAEEARIAAFSAFKSLGLNVPQFSRPILSTATENSTGEEEAATT 1346
GVAKKIKNGARKIVL+KAEEARIAAFSA KSLG +VPQF+ PI STA NS +E ++
Sbjct: 666 GVAKKIKNGARKIVLDKAEEARIAAFSACKSLGYDVPQFAPPI-STALCNSIRKEVGISS 724
Query: 1347 APRN-DKSSSFIFPVPMEHSDKPSLEANQISKKVDLESAGEKLLETSDNELSALVEGGSI 1405
D S SFI + +S+ +LE + L+++SD VEG S
Sbjct: 725 GSDTADTSHSFIDANHIGNSNVAALEKEK------------DLIKSSDRSALVSVEGKS- 771
Query: 1406 TELQQKFDAENP----PVPFVGPGTGGVEFNVNASEIKIPD-TTLSVQLGKNAIGTITSN 1460
D+ P VP V P E ++ KIPD TTLSV L K +I N
Sbjct: 772 -------DSMKPHSLSTVPVVVPTIN--EPSMAFGPAKIPDVTTLSVHLQKQNDKSIMHN 822
Query: 1461 RDLDLEVQDRPNRDPC----LVNKDRACNKGPINAINASGGFDCFLDRWEATHEFYFDIH 1516
++ +R ++N R KGPINA+++ GG DIH
Sbjct: 823 GCHAQGTGEQNHRGNLASGNMINTSR---KGPINAVSSPGG---------------LDIH 864
Query: 1517 YDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKD-LWSDHRRKDRFLIYGSSDKNVLTP 1575
K E +S FEIHG+A+CWENSP+YY+NLP+D L S++R+ D F + S K ++
Sbjct: 865 CIKRLELHSAAPFEIHGIAICWENSPMYYINLPRDILLSENRKDDSFSLTACSSKQRVSS 924
Query: 1576 EHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLE 1635
+ + RW RI +I+EK++VRKFTWN+K RFG L+ + ++ LE
Sbjct: 925 SNSKQDSMHRWSRISKIIEKKEVRKFTWNLK--------------RFGSLDTIDKNMHLE 970
Query: 1636 NVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGR 1695
V +S++LL P+H+KD IDMCIV+WIL PD+E SS+PNL+KEVKKRLS E A AAN+ GR
Sbjct: 971 VVDNSYILLPPIHVKDAIDMCIVAWILLPDEESSSSPNLDKEVKKRLSPEDAEAANQCGR 1030
Query: 1696 WKNQMRRAAHNG 1707
W+NQMR+AAHNG
Sbjct: 1031 WRNQMRKAAHNG 1042
>gi|168021285|ref|XP_001763172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685655|gb|EDQ72049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1573
Score = 1054 bits (2726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/1214 (49%), Positives = 787/1214 (64%), Gaps = 160/1214 (13%)
Query: 259 CYTPEPSIVKTYVRE-----TPKSTCGNSI-FSPGEAFWNEAIEIADGFFA-HTDIGPS- 310
C+TP P K + P N + FSPG+AFW+EA E +G ++ P
Sbjct: 354 CWTPSPGSCKILEDQPSGVSKPGEWQSNGLSFSPGDAFWDEAFEAVNGILVPNSSRQPPE 413
Query: 311 ------QIAEGIADSKSQNEINNSYN---LRNKNYNKSKEMLNEGDSKVQHIKAGGSL-- 359
QI+ G+ ++N ++ L+ K + E + + S ++ AG S+
Sbjct: 414 NSSPVRQISLGMVKDMGLMKVNGRFDSQVLKTKEVEQLIEDVRQ--SILEEENAGKSVLA 471
Query: 360 KQMGKDVIDSVKELS--------PLPIKHLDFLFEDKNLKGTKPGC---GAADTSEAMMF 408
+ G + ID+ +L+ PLP++ L ++ G D S +
Sbjct: 472 SEHGAE-IDNSNDLTRNDEFGGFPLPVRELRLRHQENLPNGNTEELVIKEVHDFSHVIAS 530
Query: 409 RDGVVSEKGSVTHKSCQKIKFKCHHDNTSRTEGISDVQEK-DSVLIVHERKLDISS---- 463
R +S+ KIK + R ++ +QE+ DS + ++ L S
Sbjct: 531 RSNPLSQMPLSLKDGFSKIKDQSEAYGV-RDTSLTRIQEQADSNVFTNDSSLSKSKVNPT 589
Query: 464 ----------QGIDSI---------------TSDSPTNVIKKPVGNEKSDEAGTPSSSGM 498
Q ++S+ TS + K V E+ +E S
Sbjct: 590 PSLLATVPRLQSVESLAEVDQFTHSSSGVPSTSYESLSAFPKGVAIERENENFVVSKLKT 649
Query: 499 LKDCLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVA 558
L +L WLP E+CS + K+G++KLY WQVECL DGVL RNLVYCASTSAGKS VA
Sbjct: 650 LYKS-ELCKWLPPELCSFFAKKGLTKLYQWQVECLQTDGVLDGRNLVYCASTSAGKSLVA 708
Query: 559 EILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTS 618
E+LMLRR++STGK ALLVLPYV++C+EKA HL+ LL+PLG+ VR +YG QGG SLP+DTS
Sbjct: 709 ELLMLRRVLSTGKKALLVLPYVTLCSEKANHLQALLQPLGKQVRGFYGTQGGSSLPQDTS 768
Query: 619 VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHM------------------------- 653
VAVCTIEKANSLVN++LEEGRLSEI +IVIDELHM
Sbjct: 769 VAVCTIEKANSLVNKLLEEGRLSEISMIVIDELHMATCRTVRSFAFSDSPILRLVDSKLL 828
Query: 654 -----VADQNRGYLLELLLTKLRYAAGEG--TSDSSSGENSGTSSGKADPAHGLQIVGMS 706
V D++RGYLLELLLTKLRYAAG G TSD S+ G ++ + LQIVGMS
Sbjct: 829 KRWGYVGDKDRGYLLELLLTKLRYAAGCGDLTSDFSA---EGWTNSNIKWSTELQIVGMS 885
Query: 707 ATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPD 766
ATMPNV+ VA WLQAALY+T FRP+PLEE++KVGN I+ K M++VR I A+LGGKDPD
Sbjct: 886 ATMPNVSEVAKWLQAALYQTEFRPIPLEEFMKVGNTIFDKSMEIVRMIRDDADLGGKDPD 945
Query: 767 HIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDA 826
HI+ELC EVV EGHSVL+FCSSRKGCE++ARH++K L FS+ +SD D +A++
Sbjct: 946 HIIELCHEVVSEGHSVLVFCSSRKGCETSARHIAKHLPPFSVIKKNSDGPE-DGNAAVEE 1004
Query: 827 LRRCPAGLDPVLEETLPSGVAYHHAGLTV---------------EEREVVETCYRKGLVR 871
LRRC AGLDPVL +T+P+GVAYHHAGLTV EE++V+ETC++ G+VR
Sbjct: 1005 LRRCSAGLDPVLADTVPAGVAYHHAGLTVLSSPCSFISNARPVAEEKDVIETCFKSGVVR 1064
Query: 872 VLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGES------ 925
VL ATSTLAAGVNLPARRVIFRQP+IGRDF+D TRYRQMAGRAGR GIDTKGES
Sbjct: 1065 VLVATSTLAAGVNLPARRVIFRQPKIGRDFVDTTRYRQMAGRAGRAGIDTKGESKFSNFV 1124
Query: 926 --------------------------MLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGM 959
+LICKPEE K+IM ++ + C L SCL++DKNGM
Sbjct: 1125 THVGESYVGGCLISYRWWATPVNMQQILICKPEEAKRIMEMMKQDCKALQSCLADDKNGM 1184
Query: 960 THAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDT 1019
A+LEVVA G+V+TA D+ RYVRCTLLN+T+PF++VVK+AQDSLRWLCH+ +EW+++
Sbjct: 1185 MRALLEVVASGMVKTAADVQRYVRCTLLNATQPFEEVVKAAQDSLRWLCHKHLVEWDKNA 1244
Query: 1020 KLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWE 1079
++Y+ TPLGRAAF SSL PEESL+V +DL++AREGFVLASDLHL+Y TP V++EPDW
Sbjct: 1245 EIYNITPLGRAAFSSSLSPEESLVVFEDLAKAREGFVLASDLHLIYEVTPTYVDLEPDWG 1304
Query: 1080 LYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPM---RISSKLRDSTKGLHGKL---- 1132
++Y+R++ELS +DQ+VG++VGV E +L+RMAHGAP+ R + R K + GK+
Sbjct: 1305 VFYQRYMELSPIDQAVGSRVGVLEAFLLRMAHGAPILQHRTGVRSRGG-KDVKGKVSPLA 1363
Query: 1133 -EYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQEN 1191
+ R + L Q LR+CKRF+VALILS LVQE P++E+CE FKV +G+VQ LQE+
Sbjct: 1364 QKSRWKSPNGAQLPVDQLLRICKRFHVALILSYLVQEVPMMEICERFKVQKGVVQGLQES 1423
Query: 1192 AGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAG 1251
AGRFA MV+ FCERLGW D+ L+ KFQ RVSFGV++EIVELT IP+VK +RARAL+KAG
Sbjct: 1424 AGRFAGMVAAFCERLGWSDMGTLVDKFQKRVSFGVKSEIVELTEIPFVKAARARALFKAG 1483
Query: 1252 LRTPLAIAEASISEIVKALFESSSWIAEAQRRVQ---LGVAKKIKNGARKIVLEKAEEAR 1308
L++ A+AEA++ E+V ALF +SSW ++ Q +GVA+KIK+GAR+I LE+AEE+R
Sbjct: 1484 LKSIHAVAEATVDELVNALFCNSSWNSQDDNGPQWSLVGVARKIKHGARQIALERAEESR 1543
Query: 1309 IAAFSAFKSLGLNV 1322
AAFSA ++LG+ V
Sbjct: 1544 AAAFSACQALGVQV 1557
>gi|224143022|ref|XP_002324822.1| predicted protein [Populus trichocarpa]
gi|222866256|gb|EEF03387.1| predicted protein [Populus trichocarpa]
Length = 646
Score = 1006 bits (2602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/639 (76%), Positives = 550/639 (86%), Gaps = 3/639 (0%)
Query: 1552 LWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQV 1611
LWS +R D NV PE+ LE++++RW +IGEIM KR V KFTWN+K+Q+QV
Sbjct: 4 LWSHKQRNDSTPSQSGDKNNVQPPENWLEIVRKRWNKIGEIMGKRGVLKFTWNLKIQLQV 63
Query: 1612 LKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSN 1671
LK A VSIQRFG + G E + SS L LSP+++++ IDMCIV+WILWPD+ERSSN
Sbjct: 64 LKGAVVSIQRFGCPSFPRKIFGPELIDSSHLTLSPINIEEAIDMCIVAWILWPDEERSSN 123
Query: 1672 PNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEEL 1731
PNLEKEVKKRLSSEA AAAN++GRWKNQMRR AHNGCCRRVAQTRALCS LWKLL SE L
Sbjct: 124 PNLEKEVKKRLSSEAVAAANQNGRWKNQMRRVAHNGCCRRVAQTRALCSGLWKLLTSEGL 183
Query: 1732 IEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYT 1791
EAL NIEIPLVNVLADMELWGIGVDMEGCL AR +L K+LRYLEKKAY LAGM FSLYT
Sbjct: 184 FEALKNIEIPLVNVLADMELWGIGVDMEGCLNARTVLGKRLRYLEKKAYKLAGMTFSLYT 243
Query: 1792 AADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCT 1851
AADIAN+LY HLKLPIPEGHNKGK+HPSTDKHCLDLLRHEHPIVPVI+EHRTLAKLLN T
Sbjct: 244 AADIANILYRHLKLPIPEGHNKGKKHPSTDKHCLDLLRHEHPIVPVIREHRTLAKLLNST 303
Query: 1852 LGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGN 1911
LGSICSLAR+SM TQKYTLHGHWLQTSTATGRLS+EEPNLQCVEH V+F+MS+ D G +
Sbjct: 304 LGSICSLARLSMETQKYTLHGHWLQTSTATGRLSIEEPNLQCVEHAVDFEMSS-DKEGDD 362
Query: 1912 AEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMI 1971
AE +H KINARDFF+P+Q+NW+LL ADYSQIELRLMAHFSKD ALI LL+KPHGDVF +I
Sbjct: 363 AEPEHYKINARDFFVPTQDNWLLLTADYSQIELRLMAHFSKDTALIKLLTKPHGDVFNLI 422
Query: 1972 AARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPG 2031
AARWTG+ E SV S ERDQTKR++YGILYGMG NTL+EQL+CSS+EA EKIKSFKSSFPG
Sbjct: 423 AARWTGKPEASVSSVERDQTKRMVYGILYGMGANTLAEQLDCSSDEAAEKIKSFKSSFPG 482
Query: 2032 VASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIK 2091
VASWLH AV+SC +KGYVE++KGRKRFLSKIKFGN++EKSKAQRQAVNSICQGSAAD+IK
Sbjct: 483 VASWLHEAVASCREKGYVETIKGRKRFLSKIKFGNSEEKSKAQRQAVNSICQGSAADLIK 542
Query: 2092 IAMINIHSIIVGGVYKPD-SSLAAN-FQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLV 2149
IAMINIHS+IV GV +P+ SSL AN F MLKG+CR+LLQVHDELVLEVDPS+I EA L+
Sbjct: 543 IAMINIHSLIVDGVGRPESSSLHANKFHMLKGQCRILLQVHDELVLEVDPSLINEAAVLL 602
Query: 2150 QKCMESAALLLVPLLVKIQVGSTWGSLEPFQADNYTNVV 2188
Q ME AA LLVPL VK++VG TWGSLEPF AD + N V
Sbjct: 603 QMSMEDAASLLVPLHVKLKVGRTWGSLEPFLADQHVNEV 641
>gi|242083352|ref|XP_002442101.1| hypothetical protein SORBIDRAFT_08g011950 [Sorghum bicolor]
gi|241942794|gb|EES15939.1| hypothetical protein SORBIDRAFT_08g011950 [Sorghum bicolor]
Length = 917
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/708 (59%), Positives = 533/708 (75%), Gaps = 24/708 (3%)
Query: 1477 LVNKDRACNKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAV 1536
L ++D A ++GP+ A N GGFDCFLD+W A F+FD+H+ + S S LFE+ GLAV
Sbjct: 224 LSSRDVA-DRGPVQAYNFPGGFDCFLDQWSAASHFFFDVHFIRRSLKPSSNLFEVFGLAV 282
Query: 1537 CWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKR 1596
CWENSP+YY N PKDL + R + +G+ ++RW++I +IM+++
Sbjct: 283 CWENSPIYYCNFPKDLVTTSNNDFREM-WGN--------------FQRRWEKITDIMQQK 327
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLG-LENVGSSFLLLSPVHLKDGIDM 1655
V+K TWN+K+QIQ LK +S QR +L L +E + +S++LLSPV + +G+D+
Sbjct: 328 SVQKMTWNLKIQIQALKSPYISCQRLERFHLDHKMLDKVEVLDNSYVLLSPVSVYNGLDI 387
Query: 1656 CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
C+++W+LWPD+E + PNLEK VK+RL SEAAAAANR GRW+NQM +AAHNGCCRR AQT
Sbjct: 388 CLLAWVLWPDEESRTVPNLEKFVKRRLHSEAAAAANRDGRWRNQMHKAAHNGCCRRSAQT 447
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
RAL +VL KLL ++ L + + IE PLVNVLADMELWGIG DM+ CL AR+++ KKL+ L
Sbjct: 448 RALYTVLKKLL-TQNLSDLVETIEAPLVNVLADMELWGIGADMDACLHARHIITKKLKEL 506
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
EK+AY LAG FSL ADIA++LY HLKLP+P+G KGK HPSTDK LD LR +HPI+
Sbjct: 507 EKEAYRLAGKNFSLNATADIADILYVHLKLPVPKGCEKGKLHPSTDKQSLDHLRDQHPII 566
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
PVIKEHRTLAKLLN TL SICS A++ +Q+Y +HG+WLQTSTATGRLSMEEPNLQCVE
Sbjct: 567 PVIKEHRTLAKLLNGTLWSICSRAQLCTQSQRYIIHGNWLQTSTATGRLSMEEPNLQCVE 626
Query: 1896 HMVEFKM--SNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
H+VEF SN+D Y + + DH KIN RDFFIP++ENW+ + ADYSQIELRLMAHFSKD
Sbjct: 627 HLVEFDTGKSNKD-YCMSVD-DHHKINVRDFFIPTKENWLFVTADYSQIELRLMAHFSKD 684
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+ LLSKP GDVFTMIA+RW + E + S+ER+ TKRLIYGILYGMG N+L+EQL C
Sbjct: 685 PTLVELLSKPDGDVFTMIASRWADKEEALISSKERENTKRLIYGILYGMGANSLAEQLEC 744
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
S+ +A +KI+SF+ FPGV+SWLH V SC QKGYVE+L GR+RFL+KI GN+KEK+KA
Sbjct: 745 STEDAAQKIQSFRRLFPGVSSWLHEVVLSCRQKGYVETLLGRRRFLTKITAGNSKEKAKA 804
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSS--LAANFQMLKGRCRLLLQVHD 2131
QRQAVNSICQGSAADIIK+AMI +HS+I DS+ + F G+C L+LQVHD
Sbjct: 805 QRQAVNSICQGSAADIIKVAMIRLHSVITNRTRATDSTDEVTRKFSEFGGQCHLILQVHD 864
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
ELVLEV P ++ +A L+Q CME AA LLVPL KI+VG TWGSLEPF
Sbjct: 865 ELVLEVVPCMVAQAGRLLQICMEEAASLLVPLRTKIKVGKTWGSLEPF 912
Score = 197 bits (500), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/143 (72%), Positives = 122/143 (85%), Gaps = 2/143 (1%)
Query: 1198 MVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
MVS FC+RLGW DLEGL++KFQNRVSFGVRAEI ELT+IP+VKGSRARALYK+GLRTP+A
Sbjct: 1 MVSAFCQRLGWNDLEGLVSKFQNRVSFGVRAEIAELTSIPFVKGSRARALYKSGLRTPVA 60
Query: 1258 IAEASISEIVKALFESSSWIAE--AQRRVQLGVAKKIKNGARKIVLEKAEEARIAAFSAF 1315
IAEASI EI KALFESS+W + +R+Q G+AKKIKNGARKIVLE+AE AR+AAFSAF
Sbjct: 61 IAEASIPEIAKALFESSAWSGQDSGLQRMQFGIAKKIKNGARKIVLEEAEAARVAAFSAF 120
Query: 1316 KSLGLNVPQFSRPILSTATENST 1338
KSLG+ VPQF+ P L+ + T
Sbjct: 121 KSLGVEVPQFTAPPLAAVEDYPT 143
>gi|413916519|gb|AFW56451.1| hypothetical protein ZEAMMB73_683344 [Zea mays]
Length = 500
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/465 (73%), Positives = 395/465 (84%), Gaps = 7/465 (1%)
Query: 707 ATMPNV--AAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKD 764
AT+ +V ++D AALY+T+FRPVPLEE+IKVGN I+ K M+VVR + A+ GGKD
Sbjct: 33 ATLSSVLDPGISDTKLAALYQTDFRPVPLEEFIKVGNQIFDKDMNVVRVLPKVADHGGKD 92
Query: 765 PDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAI 824
PDHIVELC+EVV +GHSVL+FCSSRKGCESTARHV+KFLK S+ SEF D +AI
Sbjct: 93 PDHIVELCNEVVLQGHSVLLFCSSRKGCESTARHVAKFLKLPSVGTTDVSSEFSDAAAAI 152
Query: 825 DALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVN 884
+ALRRCPAGLDP+L ETLP GVAYHHAGLTVEERE+VE+CYRKGLVRVLTATSTLAAGVN
Sbjct: 153 EALRRCPAGLDPILGETLPFGVAYHHAGLTVEEREIVESCYRKGLVRVLTATSTLAAGVN 212
Query: 885 LPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNES 944
LPARRVIFRQP+IGRDFIDGTRYRQMAGRAGRTGIDTKGES+L+C+PEEVK++ G++ +
Sbjct: 213 LPARRVIFRQPKIGRDFIDGTRYRQMAGRAGRTGIDTKGESILVCRPEEVKRVTGIIRSN 272
Query: 945 CPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSL 1004
CPPL SCLSEDKNGMTHAI+EVVAGGIVQTA DIHRYVRCTLLNST+PF DVVKSAQDSL
Sbjct: 273 CPPLESCLSEDKNGMTHAIMEVVAGGIVQTANDIHRYVRCTLLNSTRPFDDVVKSAQDSL 332
Query: 1005 RWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
RWLCH+ FLEWN +TK+YS TPLGRAAFGSSL PEESL+VLDDLSRAREGFVLASDLHLV
Sbjct: 333 RWLCHKSFLEWNHETKIYSATPLGRAAFGSSLNPEESLVVLDDLSRAREGFVLASDLHLV 392
Query: 1065 YLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDS 1124
YL TPINV++EPDWELYYE+F++LS+L+QSVGN+VGV EP+LM MAHGA + ++ +
Sbjct: 393 YLVTPINVDLEPDWELYYEKFMQLSSLEQSVGNRVGVIEPFLMHMAHGASIPFRARPERN 452
Query: 1125 TKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQET 1169
T GL K G N L T+RV KRFYVAL+LSRL Q T
Sbjct: 453 T-GLSNKSAQAAG----NTLVSEHTIRVSKRFYVALMLSRLAQNT 492
>gi|302855051|ref|XP_002959026.1| hypothetical protein VOLCADRAFT_108435 [Volvox carteri f.
nagariensis]
gi|300255592|gb|EFJ39887.1| hypothetical protein VOLCADRAFT_108435 [Volvox carteri f.
nagariensis]
Length = 2736
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/845 (45%), Positives = 509/845 (60%), Gaps = 64/845 (7%)
Query: 505 LSSWLPSEICSIYKKRGISK--LYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILM 562
L ++LP+ +C Y +RG + LY WQ ECL GVL RNLVYCA TS GKS VAE+L
Sbjct: 825 LEAYLPAPLCQAYYERGGGRFELYEWQAECLCQLGVLMGRNLVYCAPTSGGKSMVAEMLG 884
Query: 563 LRRLIST-----GKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKD- 616
LRRL++T GK LLVLP+V++CAEKAE L LL PLGR V YG Q G + +
Sbjct: 885 LRRLLTTAAPPRGKPFLLVLPFVALCAEKAEALGALLAPLGRGVNCAYGGQQNGKIIQPG 944
Query: 617 TSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGE 676
V TIEKAN LVN MLEE L E+ +++DELHMV ++ RGYLLELLLTKLR+A
Sbjct: 945 VGAIVATIEKANMLVNIMLEEDTLGELSAVIVDELHMVGEEERGYLLELLLTKLRFATSA 1004
Query: 677 GTSDSSSGENSG----------TSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYET 726
+ G G T+ G + GLQ++GMSATMPNV VA WL AALY T
Sbjct: 1005 SAGEGGGGGGGGGEAEEVPFDWTAVGPSYLREGLQVIGMSATMPNVDVVATWLDAALYCT 1064
Query: 727 NFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFC 786
FRPV L+EY+KVG I ++R ++ +D DH+ L E V+EGHSVLIFC
Sbjct: 1065 TFRPVQLQEYVKVGRRILDSSGGLIRELVPDKAWEDRDADHVALLTAETVREGHSVLIFC 1124
Query: 787 SSRKGCESTARHVSKFLK-----------------KFSINVHSSDSEFIDITSAIDALRR 829
+S+ CE A H+++ L+ + S + LRR
Sbjct: 1125 ASKILCEKVADHIARMLQIGQREPPPVTAAAGGGGGGGGGADGASPPRNTRESYVGELRR 1184
Query: 830 CPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARR 889
AG DP L + + GVAYHHAGL+ EER++VE Y+ G + VLTATSTLAAGVNLPARR
Sbjct: 1185 L-AGADPTLADLVARGVAYHHAGLSNEERDLVEAAYKAGAISVLTATSTLAAGVNLPARR 1243
Query: 890 VIFRQPRIGR--DFIDGTRYRQMAGRAGRTGIDTKGESMLIC-KPEEVKKIMGLLNESCP 946
VIFR IG+ + ID T+YRQM+GRAGR GIDT GES LIC + + V ++ L+ +
Sbjct: 1244 VIFRHTYIGKQDNPIDATKYRQMSGRAGRAGIDTAGESYLICERNKPVAPLLALMQQKAS 1303
Query: 947 PLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRW 1006
+ SCL+E + GM A+LEVVA G V + D+ R++ CTLL++ FQ V K+ +L W
Sbjct: 1304 AIGSCLTEARKGMKRAVLEVVASGAVSSGGDVKRFIGCTLLHAQYGFQAVAKATIAALHW 1363
Query: 1007 LCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
L F+ +E + + TP G+A SS+ PE++L+V DL RAR VLA+DLH+ YL
Sbjct: 1364 LKDNGFIRVDEGSLNWGPTPFGKATLASSMPPEDALVVRADLERARMSLVLATDLHVTYL 1423
Query: 1067 STPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTK 1126
TPI ++ DW++Y++ F +LS +D V VGV YL+ KLR
Sbjct: 1424 VTPIKEDLRVDWQIYFDWFEKLSRVDARVAELVGVVPAYLV------------KLR---- 1467
Query: 1127 GLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVA--RGM 1184
+ + +DA+ R+ +RF+ A++L+ L+QE P+ EV E + + +G
Sbjct: 1468 ----QGHRGARVGGGGGAADAEKERIARRFFAAMVLNDLIQEVPLKEVAEKYGLGKEKGP 1523
Query: 1185 VQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRA 1244
++ LQE AGRFA+MV+ FCERLGW DLE +IAKFQ+RV +GVR E+V LT IPYVKG RA
Sbjct: 1524 LEGLQERAGRFAAMVAAFCERLGWADLEVIIAKFQSRVWYGVRPEVVALTEIPYVKGHRA 1583
Query: 1245 RALYKAGLRTPLAIAEASIS---EIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVL 1301
R L+KAGLRTP A+A + EI+ A + E QRR + A+ I GA+ +V
Sbjct: 1584 RLLFKAGLRTPEAVAGCELERLIEILSAGAPRNPEHEEQQRRTERRAARMILQGAKDLVN 1643
Query: 1302 EKAEE 1306
+K E
Sbjct: 1644 QKVHE 1648
Score = 277 bits (709), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 253/479 (52%), Gaps = 71/479 (14%)
Query: 1726 LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
L SE L+ LL +E+PLV +LA ME G+ + R L+ +LR L KA+ AGM
Sbjct: 2261 LQSEGLLRPLLEVEMPLVRILAAMEATGVALAPRVLRDQRGPLEARLRQLAHKAHVAAGM 2320
Query: 1786 KFSLYTAADIANVLYGHLKL-PIPEGHNKGKQ-HPSTDKHCLDLLRH--EHPIVPVIKEH 1841
F L + D++ VL+ HL L P P Q HPST L+ L HPI+ + ++
Sbjct: 2321 TFDLNSPKDVSEVLFQHLNLQPPPCAFTSHHQKHPSTKXEVLEELEESTHHPILRYLLDY 2380
Query: 1842 RTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVE-- 1899
R+L KLL + ++ S AR L G WL T+TATGRLSM+EPNLQ + VE
Sbjct: 2381 RSLHKLLTGFVETLYSTAR-------GQLCGSWLHTATATGRLSMDEPNLQTIPRPVEYC 2433
Query: 1900 FKMSNED-----------IYGGNAEVD-----------------------HCK------I 1919
F++S E+ + G +V C+
Sbjct: 2434 FQLSQEESPRATTEMAVGVAGAEGQVPPLQPLQPAQGDGGEEAGGGGGGGGCRTVVRMHF 2493
Query: 1920 NARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRS 1979
N R+ F+ + ++L ADY QIELRLMAHFS D AL LL P D FT++AA W S
Sbjct: 2494 NLRNAFV-APPGHVILTADYKQIELRLMAHFSGDSALCDLLRNPAQDPFTLLAAEWKRLS 2552
Query: 1980 EDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVA 2039
+ V + R Q KRL YG+LYGMG +TL+ +L S +EA E +F+ + PGV W+
Sbjct: 2553 VEQVTPEVRVQAKRLAYGMLYGMGTSTLAAELGVSVHEAAELSDNFRRAIPGVDRWMKEV 2612
Query: 2040 VSSCHQKGYVESLKGRKRFLSKIKFGNNKE----KSKAQRQAVNSICQGSAADIIKIAMI 2095
V C GY+ +L GR+R+ +I + KE +++++RQA+NS+CQGSAAD++K AMI
Sbjct: 2613 VEQCRSCGYIVTLMGRRRYFPRINERSCKEARSQRAQSERQAINSVCQGSAADLVKAAMI 2672
Query: 2096 NIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
++ I + GR RL+L VHDELVLEV+ ++ +L + +E
Sbjct: 2673 SLTRRI-------------REEGWAGRARLVLMVHDELVLEVETGLLPAMAALTRDVLE 2718
>gi|413916521|gb|AFW56453.1| hypothetical protein ZEAMMB73_965724 [Zea mays]
Length = 546
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/486 (65%), Positives = 378/486 (77%), Gaps = 4/486 (0%)
Query: 1700 MRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
M +AAHNGCCRR AQTRAL +VL KLL ++ L + IE PLVNVLADMELWGIG DM+
Sbjct: 1 MHKAAHNGCCRRAAQTRALYTVLKKLL-TQNLSVLVETIEAPLVNVLADMELWGIGADMD 59
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPS 1819
CL+AR+++ KKL+ LEK+AY LAG FSL ADIA++LY HLKLP+P+G KGK HPS
Sbjct: 60 ACLRARHIITKKLKELEKEAYRLAGKNFSLNATADIADILYTHLKLPVPKGCEKGKLHPS 119
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTST 1879
TDK LD LR +HPI+P+IKEHRTLAKLLN TL SICS A++ +Q+Y +HG+WLQTST
Sbjct: 120 TDKQSLDHLRDQHPIIPLIKEHRTLAKLLNGTLWSICSRAQLCTQSQRYIIHGNWLQTST 179
Query: 1880 ATGRLSMEEPNLQCVEHMVEFKMSNEDI-YGGNAEVDHCKINARDFFIPSQENWILLAAD 1938
ATGRLSMEEPNLQCVEH+VEF D Y + DH KINARDFFIP++ENW+ + AD
Sbjct: 180 ATGRLSMEEPNLQCVEHVVEFDTGKSDKDYSSISVDDHHKINARDFFIPTKENWLFITAD 239
Query: 1939 YSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGI 1998
YSQIELRLMAHFSKD L+ LL KP GDVFTMIA+RW + E + S+ER+ TKR IYGI
Sbjct: 240 YSQIELRLMAHFSKDHMLVELLKKPDGDVFTMIASRWAEKEEALISSKERENTKRFIYGI 299
Query: 1999 LYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF 2058
LYGMG N+L+EQL CS+ EA +KI+SF+ FPGV+SWLH V SC QKG+VE+L GR+R
Sbjct: 300 LYGMGANSLAEQLQCSTEEAAQKIQSFRRFFPGVSSWLHEVVLSCRQKGFVETLLGRRRV 359
Query: 2059 LSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSS--LAANF 2116
L+KI GN+KEK+KAQRQAVNSICQGSAADIIK+AMI +HSII DS+ + F
Sbjct: 360 LTKITAGNSKEKAKAQRQAVNSICQGSAADIIKVAMIRVHSIITNRTSAADSTDEVTRKF 419
Query: 2117 QMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
L G+C L+LQVHDELVLEVDP ++ +A L+Q CME AA LLVPL KI+VG TWGSL
Sbjct: 420 SELGGQCHLILQVHDELVLEVDPCMVAQAGRLLQICMEEAASLLVPLRTKIKVGKTWGSL 479
Query: 2177 EPFQAD 2182
EPF +
Sbjct: 480 EPFHPE 485
>gi|307106974|gb|EFN55218.1| hypothetical protein CHLNCDRAFT_52598 [Chlorella variabilis]
Length = 2117
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 382/890 (42%), Positives = 522/890 (58%), Gaps = 98/890 (11%)
Query: 471 SDSPTNVIKKPVGNEKSDEAGTP----------SSSGMLKDCLDLSSWLPSEICSIYKK- 519
S SP + P G E + + +P +S + D L S+L +++ + ++
Sbjct: 418 SRSPGGEGRSPQGGEGAPASRSPLLGQVQEQGQASPLLSADLAMLESYLSTDLAAAFRTI 477
Query: 520 RGIS-KLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLP 578
GI+ +LY WQ ECL GVL +NL+YCA TS GKS VAE+LMLRR+++T + A+LVLP
Sbjct: 478 TGITGRLYDWQAECLTTPGVLHGKNLIYCAPTSGGKSLVAEVLMLRRILTTNRPAMLVLP 537
Query: 579 YVSICAEKAEHLEVLLEPLGRHVRSYYG-NQGGGSLPKDTSVAVCTIEKANSLVNRMLEE 637
+VSIC+EK+EHL +L + + V+ +YG + +L + T V VCTIEKAN ++NRMLE+
Sbjct: 538 FVSICSEKSEHLSKVLAAINKEVKEFYGGSHSHAALTQTTGVIVCTIEKANIIINRMLED 597
Query: 638 GRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPA 697
L + +V+DELHMV ++ RGY LELLLTKLRYAA + + +
Sbjct: 598 QSLGLLSCLVVDELHMVGEEERGYQLELLLTKLRYAAAAVDDEDDNYLS----------- 646
Query: 698 HGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTA 757
GLQI+GMSAT+PNV VA WL A L+ T+FRP G +I ++ ++VVRT+
Sbjct: 647 EGLQIIGMSATLPNVDRVAKWLNAQLFVTDFRP---------GLSIKNEALEVVRTLEVP 697
Query: 758 ANLGGK---DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFL----KKFSINV 810
D DH+ L E V+ GHSVLIFC ++K CES AR ++ L ++ +
Sbjct: 698 QGWDTSKTGDSDHVALLARETVEGGHSVLIFCGTKKACESMARRAARMLDIPERELRLKG 757
Query: 811 HSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLV 870
++ S+ S + LRR P G DP L E P G A+HHAGL+ EE+++VET YR G V
Sbjct: 758 WTA-SQRPTRASLLGDLRRVPGGADPALLECFPRGAAFHHAGLSSEEKDIVETAYRCGAV 816
Query: 871 RVLTATSTLAAGVNLPARRVIFRQPRIGR--DFIDGTRYRQMAGRAGRTGIDTKGESMLI 928
VL ATSTLAAGVNLPARRVI R GR + IDGT YRQMAGRAGR GIDT GE +LI
Sbjct: 817 SVLCATSTLAAGVNLPARRVIIRHAYKGRSANVIDGTCYRQMAGRAGRAGIDTHGECVLI 876
Query: 929 CKPEEVKKIMG--LLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTL 986
+E+ ++G L P+ SCL + K GM A+LEVV G+V D+ RY+RCTL
Sbjct: 877 N--QEIGVVVGEKLFTSGASPVQSCLVDGKKGMKRAMLEVVVSGVVVEPSDVERYIRCTL 934
Query: 987 LNSTKPFQDVVKSAQDSLRWLCHR--KFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIV 1044
L + +Q V + +LRWL R F+ W++ ++ Y TP G+A S L PE+ L++
Sbjct: 935 LAAMNDYQKVADTTIAALRWLGARDHTFIYWDDASRTYQPTPFGKAVLASGLPPEQCLVL 994
Query: 1045 LDDLSRAREGFVLASDLHLVYLSTPINVEVE-PDWELYYERFLELSALDQSVGNQVGVSE 1103
DDL+RAR+ FV+ ++LHL YL P+ + DW+ + LS D SV +VGV
Sbjct: 995 KDDLARARQSFVMTTELHLTYLCVPVTESLAFLDWKKFEVMLGTLSGPDASVATKVGVDR 1054
Query: 1104 PYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILS 1163
++MR+A G MR ++ D R+CKRF++ALIL+
Sbjct: 1055 AFVMRVARG--MRGGAQ-------------------------DGDKERICKRFWMALILT 1087
Query: 1164 RLVQETP-----------VLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLE 1212
++ E VL V + + V RG VQ LQ++A RFASMV+ FCERLGWYDLE
Sbjct: 1088 DIIAEASKGGCLSCAVVDVLTVQKKYAVGRGEVQNLQDHAARFASMVAAFCERLGWYDLE 1147
Query: 1213 GLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEA-SISEIVKALF 1271
LI KFQ+RV GVR EI+ L+ IP+VK AR LY+AGLRTP A+A ++ +IV L
Sbjct: 1148 ALIVKFQSRVLHGVRPEILALSEIPFVKAYTARLLYRAGLRTPEAVAAVENVDQIVSILA 1207
Query: 1272 ESSSWIAEAQ-----RRVQLGVAKKIKNGARKIVLEKAEEARIAAFSAFK 1316
S ++ RR L KI GAR+++ +A E R A +AFK
Sbjct: 1208 NQQSSNPDSGNPLLVRRQAL----KILRGARELLNRRARELREQAEAAFK 1253
Score = 268 bits (686), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 207/716 (28%), Positives = 321/716 (44%), Gaps = 131/716 (18%)
Query: 1520 HSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQL 1579
H ++G+ + G+AV W + +YV L HRR D
Sbjct: 1475 HDRQSAGLGVRLEGVAVSWRSGQAFYVPL-------HRRDDLLA---------------- 1511
Query: 1580 EMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGS 1639
E+ W V K TW+++ Q+ L + G L + G + G
Sbjct: 1512 ELRPLFWSAA--------VEKATWDLRGQLAAL----AKVLGPGALGVPGD----QAAGC 1555
Query: 1640 SFLLLSPVHLKDGIDMCIVSWILWPDDERSSN------------PNLEKEVKKRLSSEAA 1687
L P+ +D+ + +W+ PDD R + P ++ K +A
Sbjct: 1556 PLALRDPL-----VDVRVAAWLGTPDDGRLKDESSHSVGSGRKEPYTLSDMLKIRGGQAV 1610
Query: 1688 AAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVS----EELIEALLNIEIPLV 1743
A G Q AA + A +W+LL S +EL+ L E+PL
Sbjct: 1611 WAEATQG---MQASTAASGARRADAGRRAAQARKMWQLLRSRLRGDELLPPLWRTEMPL- 1666
Query: 1744 NVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHL 1803
+LQ+++ LE A+ AG +FSL + +++ +L+ L
Sbjct: 1667 ---------------------EPMLQRRIEELEGMAHAEAGQEFSLSSPQEVSRILFEVL 1705
Query: 1804 KL-PIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
KL P P + ST + L L HEHPI +I EHR L LLN G +
Sbjct: 1706 KLAPPPCAKDLKSGGYSTGQEVL-LELHEHPIARLIFEHRKLRTLLNRQGGP-----GLL 1759
Query: 1863 MSTQKYTLHGHWLQTSTATG---------------RLSMEEPNLQCVEHMVEFK--MSNE 1905
Q + +H + + + G RL+M+EPNLQCV +K ++
Sbjct: 1760 PFVQGFKMHLAYAEAVSYPGGLVLKRIRGSINQTCRLAMDEPNLQCVPKPRAYKVLLTPG 1819
Query: 1906 DIYGGNAEVDHCK---INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSK 1962
++ + N R F+ + +LL+ADY QIE RLMAHFS DP L + S+
Sbjct: 1820 ELGSAASGASAHADRTANLRAAFV-APPGCVLLSADYRQIEFRLMAHFSGDPGLARVFSE 1878
Query: 1963 PHGDVFTMIAARWTGRSEDS-------------VGSQERDQTKRLIYGILYGMGPNTLSE 2009
D F ++AA+W G ++ V Q+RD K+L YG+LYGMG L++
Sbjct: 1879 DGADPFRLLAAQWLGAPQEQARPRGWLGRGRRGVTQQQRDHAKQLTYGLLYGMGAAKLAD 1938
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
+L CS EA+ + F++S PG+ +W V+ C + GYVE+L GR+R+L I + ++
Sbjct: 1939 ELGCSVAEARTAQEKFRASMPGIEAWQARVVAECRRLGYVETLAGRRRYLPNINCRDGRK 1998
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVG--GVYKPDSSLAANFQMLKGRCRLLL 2127
++ A+RQA N++CQGSAAD+ K AM+ IH+ + + + RL+L
Sbjct: 1999 RAAAERQAKNTVCQGSAADLAKAAMVAIHTRLAAWLALGSGGNCGCGGGPGGGPAARLVL 2058
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCME---SAALLLVPLLVKIQVGSTWGSLEPFQ 2180
Q+HDE +LEV +++ LV+ CME S L VPL V++ G +WG L+P +
Sbjct: 2059 QIHDEFLLEVAEPLLEPVARLVRDCMEGLASGVRLRVPLRVRLAAGPSWGELQPVE 2114
>gi|348529422|ref|XP_003452212.1| PREDICTED: DNA polymerase theta [Oreochromis niloticus]
Length = 2407
Score = 624 bits (1610), Expect = e-175, Method: Compositional matrix adjust.
Identities = 353/872 (40%), Positives = 510/872 (58%), Gaps = 92/872 (10%)
Query: 503 LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEIL 561
L LSSW LP + Y+K G+++++ WQ +CL V VL+ NLVY A TSAGK+ V+E+L
Sbjct: 237 LLLSSWGLPKPVLDRYQKHGVTRMFEWQAQCLAVGQVLRGGNLVYSAPTSAGKTLVSELL 296
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAV 621
ML+R++ T + AL +LP+VS+ EK +L+ + E G V Y G+ VAV
Sbjct: 297 MLKRVLETKRKALFILPFVSVAKEKMHYLQSIFEEAGVRVEGYMGSTSAAGGFTALDVAV 356
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS 681
CTIEKANSL+NR++EE ++ +G++V+DELHMV D RGYLLELLLTK+RY A + S
Sbjct: 357 CTIEKANSLINRLIEENSMTLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQKQNSTG 416
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN 741
S E G+QI+GMSAT+PN++ +A WL A LY+T++RPVPL+E++KVG
Sbjct: 417 SLSE-------------GIQIIGMSATLPNLSLLASWLGAELYQTDYRPVPLQEHLKVGC 463
Query: 742 AIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSK 801
IY + + VVR A ++ G D DH+V LC E V+EGH VL+FC S+ CE A +++
Sbjct: 464 NIYDQSLSVVRHFTPALHVKGDD-DHVVSLCYETVREGHCVLLFCPSKNWCEKLADTIAR 522
Query: 802 FLKKFSINVHSSDSE----------FIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHA 851
S++E +D+ I LRR PAGLDP+L+ T+P GVA+HHA
Sbjct: 523 EFYNLRHAERQSEAEPQPVRLDQEGLVDV---IAQLRRTPAGLDPILQRTVPWGVAFHHA 579
Query: 852 GLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMA 911
GLT +ER+V+E +R+G++RVL ATSTL++GVNLPARRVI R P +D Y+QMA
Sbjct: 580 GLTFDERDVLEGAFRQGMIRVLAATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMA 639
Query: 912 GRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK-----NGMTHAILEV 966
GRAGR GIDT GES+L+CK E +K + LL + P+ SCL + M AILE+
Sbjct: 640 GRAGRKGIDTTGESVLVCKEAERQKGITLLKGALQPISSCLVRREGEGVTTSMLRAILEI 699
Query: 967 VAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDS--------LRWLCHRKFLEWNED 1018
+ GG+ T +D+ Y C+LL ++ S +++ + WL +F+ +D
Sbjct: 700 IVGGVASTPQDVRLYASCSLLAASMKCHGKKVSKEETSKGSIETCVEWLMENEFINIQKD 759
Query: 1019 TK----LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE- 1073
+ Y T LG A SSL P E+L + DL RA +GFVL +DLH++YL TP+ E
Sbjct: 760 GQGNATRYCPTQLGAATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYLITPLYAEW 819
Query: 1074 VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLE 1133
DW ++ + +LS+ + V VGV E +L R +S KL T+ H
Sbjct: 820 TTIDWYQFFCLWEQLSSSMKRVAELVGVQEGFLAR-------SVSGKLVAKTEKQH---- 868
Query: 1134 YRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAG 1193
+ + + KRF+ L+L LV E P+ V + +RG +Q+LQ++A
Sbjct: 869 --------------RQMAIHKRFFTTLVLQDLVNEVPLGTVANKYNCSRGQLQSLQQSAS 914
Query: 1194 RFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLR 1253
+A MV+VFC+RLGW+++E L++++Q R+SFGV+ E+V+L + + +RARALY GL
Sbjct: 915 TYAGMVTVFCKRLGWHNMELLLSQYQTRLSFGVQRELVDLVRVSLLNATRARALYAQGLC 974
Query: 1254 TPLAIAEASISEIVKAL-----FESS------SWIAEAQRR------VQLGVAKKIKNGA 1296
T +A A+++++ KAL F+SS S + A+RR V G A + A
Sbjct: 975 TVAELARATVADVEKALRNAIPFKSSKRAVDESEVEAAERRSLRCVWVTGGRALTEQEAA 1034
Query: 1297 RKIVLEKAEEARIAAFSAFKSLGLNVPQFSRP 1328
+IV EAR+ LG+ S P
Sbjct: 1035 VEIV----SEARLLLQEDLAQLGIQWDPTSLP 1062
Score = 256 bits (654), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 269/533 (50%), Gaps = 64/533 (12%)
Query: 1704 AHNGCCR-RVAQT----RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDM 1758
AH+ C R R A T A+ + L +L E ++ +IE+P LA +EL G+G +
Sbjct: 1876 AHSHCSRVRAATTSVLIHAVMNHLTGMLEKEGTLDFFRSIEMPSQVCLALLELNGVGFSV 1935
Query: 1759 EGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGH------- 1811
E C + ++++Q KL LE +AY LAG FSL DIA VL+ L LP P G
Sbjct: 1936 EECERQKHVMQAKLSALESEAYALAGHSFSLTCVDDIAQVLFLELHLP-PNGDVGGSKSK 1994
Query: 1812 -------------NKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSL 1858
GKQ ST K L+ LR H + VI E R + L + +
Sbjct: 1995 KTLGYTRRAGGRVRLGKQF-STTKDVLEKLRPLHTLPGVILEWRRITNALTKVVFPLQRE 2053
Query: 1859 ARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM---------SNEDIY- 1908
R + + ++ QT TATGR+S EPN+Q V E M S + Y
Sbjct: 2054 KRYHPTLEMDRIYP-IAQTHTATGRVSFTEPNIQNVPKDFEIHMPTMVGESPPSQDGCYR 2112
Query: 1909 ---------------GGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
G + + ++ R FIP ++LAADYSQ+ELR++AH SKD
Sbjct: 2113 TTKAGRRSVVSSVAAGTSEQGPAFSVSMRHAFIPFS-GGMILAADYSQLELRVLAHLSKD 2171
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
L+ +L+ DVF IAA W +SV R Q K++ YGI+YGMG +L EQ+
Sbjct: 2172 QRLLQVLNG-GADVFRCIAAEWKSVEPESVNDSLRQQAKQICYGIIYGMGAKSLGEQMGV 2230
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
N+A I+SFK+ + G+ ++L V +C + GYV++L GR+R+L I N K+ A
Sbjct: 2231 DENDAACYIESFKARYKGINAFLKQTVRNCIKDGYVQTLMGRRRYLPGITSSNAHIKAHA 2290
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGV-YKPDSSLAANF---QMLKGRCRL---- 2125
+RQAVN+ QGSAADI+K+A +NI + P S N GR +L
Sbjct: 2291 ERQAVNTTVQGSAADIVKLATVNIQKRLQNTYPAAPPSHQHTNSVRNHRRAGRSQLRGAY 2350
Query: 2126 -LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+LQ+HDEL+ E + + +V++ MESA L V L K++VG +WG+L+
Sbjct: 2351 FILQLHDELIYEATEEDLIQVAQIVKREMESAVKLYVKLKAKVKVGPSWGNLQ 2403
>gi|291243319|ref|XP_002741550.1| PREDICTED: mutagen-sensitive 308-like [Saccoglossus kowalevskii]
Length = 1230
Score = 610 bits (1574), Expect = e-171, Method: Compositional matrix adjust.
Identities = 330/807 (40%), Positives = 476/807 (58%), Gaps = 67/807 (8%)
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILML 563
LSSW LPS + Y I++++ WQ ECL VL NLVY A TSAGK+ VAE+L+L
Sbjct: 448 LSSWGLPSSVLQRYHDNKITEMFDWQAECLSQGKVLSGGNLVYSAPTSAGKTMVAELLIL 507
Query: 564 RRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCT 623
+R++ T + A+++LP+VS+ EK +L+ + E G V Y GN VAVCT
Sbjct: 508 KRVLETKQKAIVILPFVSVAREKMFYLQRMFEECGVRVEGYMGNMSPAGGFASLDVAVCT 567
Query: 624 IEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSS 683
IEKANSL+NR+LEE +L+++G IV+DELHMV D +RGYLLELLLTK+RY + +
Sbjct: 568 IEKANSLINRLLEENKLNQLGAIVVDELHMVGDSHRGYLLELLLTKIRYVSSKVVQKK-- 625
Query: 684 GENSGTSSGKADP-----AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
E++GT+ K D + +QI+GMSAT+PN+ +A WL A LY+T+FRPVPLEE +K
Sbjct: 626 -EDTGTNGDKGDSRILSNTNPIQIIGMSATLPNLDLLARWLDADLYKTDFRPVPLEECVK 684
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+G+ IY+ ++ +R I A + G D +HI+ LC E + GHSVLIFC ++ CE +
Sbjct: 685 IGDKIYNSELKKLREISPAVQVSGDD-EHIIPLCFETITNGHSVLIFCPTKNWCEKLSEM 743
Query: 799 VSKFLKKF-----SINVHSS-----DSEFI-------DITSAIDALRRCPAGLDPVLEET 841
++K + K ++ H++ S+ + I ++ L+R P G+D VL+ T
Sbjct: 744 IAKQIFKVLYSGAAVTGHTTAGPVKASQLVPAQFNKQGIIDVLEQLKRTPVGIDSVLKRT 803
Query: 842 LPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDF 901
+P VAYHHAGLT +ER+++E +R+G++++L ATSTL++GVNLPARRVI R P R
Sbjct: 804 VPYAVAYHHAGLTFDERDIIEGAFRQGILKILIATSTLSSGVNLPARRVIIRTPMFNRRL 863
Query: 902 IDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL-----SEDK 956
+D Y+QM+GRAGR G+DT GES+LICK E K L+ P+ SCL E
Sbjct: 864 LDVLTYKQMSGRAGRKGVDTMGESILICKSNERSKGQHLMQTELKPVCSCLVKENGEETT 923
Query: 957 NGMTHAILEVVAGGIVQTAEDIHRYVRCTLLN---STKPFQDVVKSAQDSLRWLCHRKFL 1013
+ M AILEV+ G+ + D+ +Y CTLL +T S Q+ +++L +F+
Sbjct: 924 SSMKRAILEVIVSGVATSPSDVDKYASCTLLAASLTTSESTSNFGSIQNCIKFLVDNEFI 983
Query: 1014 EWN------EDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLS 1067
+ E + Y T LG A SSL P+E+L+V +L RAR+ FVL ++LH++Y
Sbjct: 984 RLHQVKNGAESSDKYVATQLGSATLSSSLSPDEALVVFSELQRARKSFVLENELHILYQV 1043
Query: 1068 TPI-NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTK 1126
TPI + + DW Y + + LS + VG VG+ E +L R G+
Sbjct: 1044 TPIYDQGIVNDWYRYIDIWETLSIDKKRVGELVGIEERFLARAVGGS------------- 1090
Query: 1127 GLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQ 1186
S + + L + KRFY A+IL LV E P+ EV + V +G +Q
Sbjct: 1091 ------------ISTSTFKQQRVLAIHKRFYTAMILEDLVNEIPIAEVSRKYSVPKGQLQ 1138
Query: 1187 ALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARA 1246
+LQ++A F+ MV+VFC RLGW +LE L+ +FQNR++FGV+ E+ +L I + G RAR
Sbjct: 1139 SLQQSAATFSGMVTVFCSRLGWINLEILLEQFQNRLNFGVQRELCDLVRISLLNGQRARI 1198
Query: 1247 LYKAGLRTPLAIAEASISEIVKALFES 1273
LY G T IA+A +I L S
Sbjct: 1199 LYNGGYHTIANIAQADPIDIENLLRNS 1225
>gi|432846329|ref|XP_004065883.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Oryzias
latipes]
Length = 2391
Score = 610 bits (1573), Expect = e-171, Method: Compositional matrix adjust.
Identities = 343/820 (41%), Positives = 496/820 (60%), Gaps = 80/820 (9%)
Query: 503 LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEIL 561
L LSSW LP + Y+K G+++++ WQ +CL V VLQ NLVY A TSAGK+ V+E+L
Sbjct: 56 LLLSSWGLPKPVLERYQKHGVTQMFEWQXQCLTVGQVLQGGNLVYSAPTSAGKTLVSELL 115
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAV 621
ML+R++ T + AL +LP+VS+ EK ++L+ + + G V Y G+ VAV
Sbjct: 116 MLKRVLETKRKALFILPFVSVAKEKMQYLQSVFQEAGVRVEGYMGSTSAAGGFTTLDVAV 175
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS 681
CTIEKANSLVNR++EE ++ +G++V+DELHMV D RGYLLELLLTK+ Y S
Sbjct: 176 CTIEKANSLVNRLIEEDNMALLGMVVVDELHMVGDSGRGYLLELLLTKILYI-------S 228
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN 741
+ SG+ S G+QI+GMSAT+PN+A +A WL A LY+T++RPVPLEE++KVG
Sbjct: 229 QKQKTSGSLS------EGVQIIGMSATLPNLALLAGWLGAELYQTDYRPVPLEEHLKVGC 282
Query: 742 AIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSK 801
+IY + + VVR ++ G D DHIV LC E V++GHSVL+FC S+ CE A +++
Sbjct: 283 SIYDRSLSVVRQFTPVLHVKGDD-DHIVSLCYETVRQGHSVLLFCPSKNWCEKLADTIAR 341
Query: 802 FLKKFSINVHSSDSEFIDI-------TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
++I + +E + + + LRR PAGLDP+L+ T+ GVA+HHAGLT
Sbjct: 342 EF--YNIRLSDGKAEPLPVCLDHDGLMDVLAQLRRTPAGLDPILQRTVRWGVAFHHAGLT 399
Query: 855 VEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA 914
+ER+V+E +R+GLVRVL+ATSTL++GVNLPARRVI R P +D Y+QMAGRA
Sbjct: 400 FDERDVLEGAFRQGLVRVLSATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMAGRA 459
Query: 915 GRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK-----NGMTHAILEVVAG 969
GR G+DT+GES+L+CK E KK LL S P+ SCL + M AILE++ G
Sbjct: 460 GRKGVDTRGESLLVCKKAEEKKGASLLRGSLQPISSCLVRREGEGVATSMLRAILEIIVG 519
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLR--------WLCHRKFLEWNEDTK- 1020
G+ T +D+ RY C+LL ++ S ++S R WL +F+ +D +
Sbjct: 520 GVACTPQDVQRYASCSLLAASVRCDSKKPSGKESNRGAIEACVEWLMENEFINIQKDEQG 579
Query: 1021 -----LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE-V 1074
Y T LG A SSL P E+L + DL RA +GFVL +DLH++YL TP+ E
Sbjct: 580 NVKPERYCPTQLGAATLASSLSPPEALGIFADLQRAMKGFVLENDLHIMYLITPLYAEWT 639
Query: 1075 EPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEY 1134
DW ++ + +LS+ + V VGV E +L R +S KL T+
Sbjct: 640 TIDWYQFFCLWEQLSSSMKRVAELVGVQESFLAR-------SVSGKLVAKTE-------- 684
Query: 1135 RLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGR 1194
++ + + KRF+ L+L LV E P+ V + RG +Q+LQ++A
Sbjct: 685 ----------KQSRQMAIHKRFFTTLVLQDLVNEVPLGTVASKYNCNRGQLQSLQQSAST 734
Query: 1195 FASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRT 1254
+A MV+VFC+RLGW+++E L++++Q R+SFGV+ E+++L + + +RARALY GL T
Sbjct: 735 YAGMVTVFCKRLGWHNMEMLLSQYQTRLSFGVQRELLDLVRVSLLNATRARALYAQGLCT 794
Query: 1255 PLAIAEASISEIVKAL-----FESS------SWIAEAQRR 1283
+A A+++++ KAL F+SS S + A+RR
Sbjct: 795 VAELARATVADVEKALRNSVPFKSSKRAVDESEVEAAERR 834
Score = 250 bits (639), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 265/529 (50%), Gaps = 63/529 (11%)
Query: 1705 HNGCCR-RVAQTRALCSV----LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
H+ C R R A + L L LL + ++ N+E+P LA +EL G+G +E
Sbjct: 1866 HSYCPRVRAATSSVLLHTVMNHLTGLLEKDGTLDLFRNVEMPSQVCLALLELNGLGFSVE 1925
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG----- 1814
C + ++++Q KL LE +AYTLAG FSL + DIA VL+ L LP P G G
Sbjct: 1926 ECERQKHVMQAKLSALESEAYTLAGHSFSLTSVDDIAQVLFLELHLP-PNGEIGGIRTKK 1984
Query: 1815 --------------KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLAR 1860
+ ST K L+ LR HP+ VI E R ++ N + L R
Sbjct: 1985 TLGYTRRGGGRVRFGKQFSTTKDVLEKLRPLHPLPGVILEWR---RITNALTKVVFPLQR 2041
Query: 1861 ISM--STQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMS---NEDIYGGNAEVD 1915
T K QT TATGR+S EPN+Q V + KM +E NA
Sbjct: 2042 EKQYHPTLKMDRIYPIAQTHTATGRVSFTEPNIQNVPKDFDIKMPTMVDESPPSQNAPHR 2101
Query: 1916 HCK---------------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
K ++ R F+P ++LAADYSQ+ELR++AH SKD
Sbjct: 2102 PGKKRRPLTPALTRGLAEQGPAFSVSMRHAFVPF-SGGMILAADYSQLELRVLAHLSKDQ 2160
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+ +L+ DVF IAA W +SV R Q K++ YGI+YGMG +L EQ+
Sbjct: 2161 RLLQVLNG-GADVFRCIAAEWKNVDPESVQDNLRQQAKQICYGIIYGMGAKSLGEQMGVE 2219
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
N+A I+SFK+ + G+ ++L V +C + G+V++L GR+R+L I + ++ A+
Sbjct: 2220 ENDAACYIESFKARYKGINAFLKQTVKNCIKDGFVQTLMGRRRYLPGILSSSPHIRAHAE 2279
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR------LLLQ 2128
RQAVN+ QGSAADI+K+A +NI + Y + + + R +LQ
Sbjct: 2280 RQAVNTTVQGSAADIVKLATVNIQKRL-QKTYPAAPPSHQHLHTARNQRRAVRGAYFILQ 2338
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+HDEL+ E + + +V++ MESA L V L VK+++G +WG L+
Sbjct: 2339 LHDELIYETTQEDLIQVAQIVKREMESAVKLYVKLKVKVKMGCSWGDLQ 2387
>gi|224043967|ref|XP_002187783.1| PREDICTED: DNA polymerase theta [Taeniopygia guttata]
Length = 2588
Score = 608 bits (1567), Expect = e-170, Method: Compositional matrix adjust.
Identities = 333/802 (41%), Positives = 475/802 (59%), Gaps = 68/802 (8%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L+SW LP + Y G+ +++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 79 DKLLLASWGLPKAVLEKYHGLGVVQMFEWQAECLMLGQVLEGKNLVYSAPTSAGKTLVAE 138
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ T K ALL+LP+VS+ EK +L+ L + + V Y G+ V
Sbjct: 139 LLILKRVLETHKKALLILPFVSVAKEKKRYLQALFQEVDVRVEGYMGSMAPAGRFSALDV 198
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIEKAN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+RY T
Sbjct: 199 AVCTIEKANGLINRLIEENKMDSLGVVVVDELHMLGDSHRGYLLELLLTKVRYV----TE 254
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
+ G + TS G G+QIVGMSAT+PN+ +A WL A LY T+FRPVPL+E++K+
Sbjct: 255 KVAKGHSKSTSPGFG----GIQIVGMSATLPNLGLLASWLDAELYCTDFRPVPLKEWVKI 310
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
G+ IY M++VR L G D DHIV LC E V GHSVL+FC S+ CE A +
Sbjct: 311 GSNIYDSSMNLVREFQPKLQLKG-DEDHIVSLCYETVCGGHSVLLFCPSKNWCEKLADII 369
Query: 800 SKFLKKFSINVHSS----------DSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYH 849
++ S+ D E ID +D L+R +GLD VL+ TLP GVA+H
Sbjct: 370 AREFYGLQQTESSAKNSALAPVVVDREGID--EVLDQLKRSISGLDSVLQRTLPWGVAFH 427
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
HAGLT +ER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D Y+Q
Sbjct: 428 HAGLTFDERDIIEGAFRRGLIRVLAATSTLSSGVNLPARRVIIRTPTFGGRLLDILTYKQ 487
Query: 910 MAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK-----NGMTHAIL 964
MAGRAGR G+DT+GES+L+CKP E K LL S P+ SCL + + M AIL
Sbjct: 488 MAGRAGRKGVDTEGESILVCKPSERSKGAALLQGSLKPVCSCLLRREGEGVASSMKRAIL 547
Query: 965 EVVAGGIVQTAEDIHRYVRCTLLNST--------KPFQDVVKSA--QDSLRWLCHRKFLE 1014
E++ GG+ T ED+ Y CTLL S+ +D ++ + + WL +F++
Sbjct: 548 EIIVGGVANTPEDVQTYASCTLLASSLKESKWENGKEEDKARAGPIEACVAWLLENEFIQ 607
Query: 1015 WNEDT-----KLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTP 1069
+ K+Y T LG A SSL P E+L + DL RA + FVL +DLH+VYL TP
Sbjct: 608 VVDSDNDVKGKVYHPTHLGSATLSSSLSPTEALEIFADLQRAMKSFVLENDLHIVYLVTP 667
Query: 1070 INVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGL 1128
+ E DW ++ + +L A + V VG+ E +L R G K+ T+
Sbjct: 668 VYEEWTTIDWYQFFCLWEKLPASMKRVAELVGIEEGFLARSVKG-------KITAKTEKQ 720
Query: 1129 HGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQAL 1188
H + + + KRF+ +L L L+ E P+ ++ + + RG +Q+L
Sbjct: 721 H------------------RQMAIHKRFFTSLALLDLISEVPLQDMTKKYGCNRGQLQSL 762
Query: 1189 QENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALY 1248
Q++A +A MV+VFC RLGW+++E L+++FQ+R++FGV E+ +L + + RAR LY
Sbjct: 763 QQSAATYAGMVTVFCNRLGWHNMELLLSQFQSRLTFGVHRELCDLVRVSLLNAQRARTLY 822
Query: 1249 KAGLRTPLAIAEASISEIVKAL 1270
AG T +A+AS ++ AL
Sbjct: 823 SAGFVTVADLAKASPGDVAAAL 844
Score = 244 bits (622), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 178/536 (33%), Positives = 265/536 (49%), Gaps = 81/536 (15%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L K L E L + +E+P L+ +EL GIG + ++Q KL +E KAY
Sbjct: 2056 LHKELQKENLTDVFSKVEMPTHYCLSLLELNGIGFSTTAYETQKQVMQAKLSQIETKAYQ 2115
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIP-----EGHNK-----------------GKQHPS 1819
LAG FSL + DIA VL+ LKLP +G+ K KQ S
Sbjct: 2116 LAGHSFSLTSPDDIAEVLFLELKLPQNGDVKVQGNKKTLGYTRRATAKGNRVRLSKQF-S 2174
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTST 1879
T K L+ L+ HP+ +I E R + + + + R++ + ++ QT T
Sbjct: 2175 TTKDVLEKLKTLHPLPGLILEWRRINNAITKVVYPLQREKRLNSALGMERIY-PISQTHT 2233
Query: 1880 ATGRLSMEEPNLQCVEHMVEFKM-----------SNEDIYGGNAEVDHCK---------- 1918
ATGR+S EPN+Q V E +M ++ ++ A C+
Sbjct: 2234 ATGRVSFTEPNIQNVPRDFEIEMPTVVEESPPSQAHGNVNSHAALGGRCRKRSSILPNGL 2293
Query: 1919 ----------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSK 1962
++ R F+P ++LAADYSQ+ELR++AH S D LI L+
Sbjct: 2294 KVQAANISEERGIQFSVSMRHAFVPF-PGGLILAADYSQLELRILAHLSCDCRLIQALNG 2352
Query: 1963 PHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKI 2022
DVF IAA W ++VG + R Q K++ YGI+YG+G +L EQ+ NEA I
Sbjct: 2353 -GTDVFKSIAAEWKMIDPEAVGERTRQQAKQICYGIIYGIGAKSLGEQMGIDENEAANYI 2411
Query: 2023 KSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSIC 2082
+SFKS + GV +L V SC + G+V+++ GR+R+L IK N K+ A+RQAVN+
Sbjct: 2412 ESFKSRYTGVQKFLRETVRSCRRDGFVQTILGRRRYLPAIKDPNPYSKAHAERQAVNTTV 2471
Query: 2083 QGSAADIIKIAMINIHSII--VGGVYKPDSSLAANFQMLK-GRCR--------------- 2124
QGSAADI+K A +NI + V+K L ++FQ K GR
Sbjct: 2472 QGSAADIVKTATVNIQKRLEAFPSVFKSHGHLESSFQRDKTGRLSRKRNTGMLHPIRGGF 2531
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
+LQ+HDEL+ EV + + +V++ ME+A L V L VK+++G +WG+L+ +
Sbjct: 2532 FILQLHDELLYEVAEDDVIQVAQIVKREMENAIKLSVKLDVKVKIGPSWGALQDLE 2587
>gi|326677806|ref|XP_694437.5| PREDICTED: DNA polymerase theta [Danio rerio]
Length = 2593
Score = 604 bits (1558), Expect = e-169, Method: Compositional matrix adjust.
Identities = 335/854 (39%), Positives = 495/854 (57%), Gaps = 74/854 (8%)
Query: 453 IVHERKLDISSQGIDSITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLK-----DCLDLSS 507
++ ++K + +Q + +T P + +G+ +AG S M + D L LSS
Sbjct: 231 VLQQQKRSLKNQSVSVLTP--PPGLDLTVLGDATLSDAGIAQSIHMGRPADQLDKLLLSS 288
Query: 508 W-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRL 566
W LP + Y+ G+ +++ WQ ECL + VL+ +NLVY A TSAGK+ V+E+L+L+R+
Sbjct: 289 WGLPKPVLEKYQSLGVHRMFEWQAECLTLGKVLEGQNLVYSAPTSAGKTLVSELLILKRV 348
Query: 567 ISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEK 626
+ T + A+ +LP+VS+ EK +L+ + + G V Y G+ VAVCTIEK
Sbjct: 349 LETRQKAMFILPFVSVAREKMFYLQNVFQEAGIRVEGYMGSTSAAGGFSALDVAVCTIEK 408
Query: 627 ANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGEN 686
AN LVNR++EE +L +G +V+DELHMV D RGYLLELLLTK+RY A + T+ +SG++
Sbjct: 409 ANGLVNRLIEEDKLDLLGTVVVDELHMVGDSGRGYLLELLLTKIRYIA-QKTATRNSGQS 467
Query: 687 SGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSK 746
+ T G+QI+GMSAT+PN+ +A WL A LY TN+RPVPL E++K+G IY
Sbjct: 468 TST---------GVQIIGMSATLPNLDLLARWLSAELYSTNYRPVPLMEWVKIGTNIYDG 518
Query: 747 KMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKF 806
+++VR A + G D DHIV LC E VQ+GHS L+FC S+ CE A + +
Sbjct: 519 SLNLVRQFTPALPIKGDD-DHIVSLCFETVQDGHSALLFCPSKNWCEKLADSIGREFYNL 577
Query: 807 SINVHSSDSEFIDIT-------SAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
S S I+ + L+R PAGLD VL+ T+P GVA+HHAGLT +ER+
Sbjct: 578 HHKEMQSGSGGQSISLNQEGLLDVLAQLKRTPAGLDHVLQRTVPWGVAFHHAGLTFDERD 637
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
++E +R+G +RVL ATSTL++GVNLPARRVI R P +D Y+QM GRAGR G+
Sbjct: 638 ILEGAFRQGYIRVLAATSTLSSGVNLPARRVIIRTPVFNGHLLDILTYKQMVGRAGRKGV 697
Query: 920 DTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK-----NGMTHAILEVVAGGIVQT 974
DT GES+L+CK E K M L+ S P+ SCL + + M AILE++ GG+ +
Sbjct: 698 DTIGESVLVCKEAERAKGMSLIQGSLKPISSCLVKREGEGVTTSMLRAILEIIVGGVASS 757
Query: 975 AEDIHRYVRCTLLNSTKPFQDVVKSAQDS-----------LRWLCHRKFLEWNE--DTKL 1021
+D+ Y CTLL ++ ++V + +S + WL +F+ + D K+
Sbjct: 758 PQDVRMYAACTLLAASIAAEEVHQDGSESEARNKGAIEACIEWLMDNEFIHIQKEGDGKM 817
Query: 1022 ----YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE-VEP 1076
Y T LG A SSL P E+L + DL RA +GFVL +DLH++Y TP+ V+
Sbjct: 818 PKDKYCPTHLGSATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYQITPVYVDWTTI 877
Query: 1077 DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
DW ++ + +L + + V VG+ E +L R G + + K R
Sbjct: 878 DWYQFFCLWEQLPSAMKRVAEMVGIQEGFLARSVGGKLIAKTEKQR-------------- 923
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
+ + + KRF+ L+L LV E P+ V + + +RG +Q+LQ++A +A
Sbjct: 924 -----------RQMAIHKRFFTTLVLLDLVSEEPLGAVAKKYGCSRGQLQSLQQSASTYA 972
Query: 1197 SMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPL 1256
MV+VFC RLGW++LE L+++FQ+R+SFGV+ E+ +L I + RAR LY +G T
Sbjct: 973 GMVTVFCNRLGWHNLELLLSQFQSRLSFGVQRELCDLVRISLLTAQRARTLYSSGFVTVA 1032
Query: 1257 AIAEASISEIVKAL 1270
+A A ++E+ KAL
Sbjct: 1033 ELARADVTEVEKAL 1046
Score = 254 bits (650), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 260/524 (49%), Gaps = 82/524 (15%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LL + ++ +E+P LA +EL GIG + C ++++Q KL LE +AY LAG
Sbjct: 2077 LLEKDGFLDVFKKVEMPTQYCLALLELNGIGFSIAECEAQKHVMQAKLSALESQAYQLAG 2136
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHP-------------------STDKHCL 1825
FSL + D+A VL+ LKLP P G G ++ ST K L
Sbjct: 2137 HSFSLTSPEDVAEVLFLELKLP-PNGDLNGLKNKKTLGYTRRAGARIKLSKQFSTTKDVL 2195
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L+ HP+ VI E R + L + + + + +H Q+ TATGR+S
Sbjct: 2196 EKLKPLHPLPGVILEWRRITNALTKVVFPLQREKKWHSHLKMDRIHP-ISQSHTATGRVS 2254
Query: 1886 MEEPNLQCVEHMVEFKM------SNEDIYGGN------AEVDHCKIN------------- 1920
EPN+Q V E +M S GG+ A KIN
Sbjct: 2255 FTEPNIQNVPKDFEIQMPTLIEESQTSQNGGSKMWYISASCKRTKINRLLAPLLKVSDKS 2314
Query: 1921 ----------ARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
R F+P ++LA DYSQ+ELR++AH S+D L+ +L+ DVF
Sbjct: 2315 PDKGMQFSVSMRHAFVPFS-GGLILAVDYSQLELRILAHLSRDRRLLHVLNS-GADVFKS 2372
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFP 2030
IAA W SV R Q K++ YGI+YGMG +L EQ+ N+A I++FKS +
Sbjct: 2373 IAAEWKMVDPASVDDNMRQQAKQICYGIIYGMGAKSLGEQMGIEENDAACYIETFKSRYN 2432
Query: 2031 GVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADII 2090
G+ ++L V C + GYV++L GRKRFL IK N KS A+RQAVN+ QGSAADI+
Sbjct: 2433 GIQNFLRETVQKCGKNGYVKTLLGRKRFLPGIKDSNVYIKSHAERQAVNTTVQGSAADIV 2492
Query: 2091 KIAMINIH-----------------SIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
K+A INI SI +GG ++ F+ L+G +LQ+HDEL
Sbjct: 2493 KLATINIQRRIEEAFPGVPTSHQHPSIRLGGRHR------NQFRPLRG-GYFILQLHDEL 2545
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+ EV + + +V++ MES L V L VK++VG +WG+L+
Sbjct: 2546 IYEVAEEDVIQVAQIVKREMESVVKLYVKLRVKVKVGPSWGNLQ 2589
>gi|363728424|ref|XP_416549.3| PREDICTED: DNA polymerase theta [Gallus gallus]
Length = 2613
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 325/802 (40%), Positives = 478/802 (59%), Gaps = 68/802 (8%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L+SW LP + Y G+ +++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 77 DKLLLASWGLPKAVLEKYHSLGVVQMFEWQAECLMLGQVLEGKNLVYSAPTSAGKTLVAE 136
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ T K AL +LP+VS+ EK +L+ L + + V Y G+ V
Sbjct: 137 LLILKRVLETRKKALFILPFVSVAKEKKCYLQALFQEVDMRVGGYMGSISPAGRFSLLDV 196
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIEKAN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+RY +
Sbjct: 197 AVCTIEKANGLINRLIEENQMDSLGVVVVDELHMLGDSHRGYLLELLLTKVRYITEKAAK 256
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
+ ++ G G+Q+VGMSAT+PN+ +A WL A LY T+FRPVPL+E++K+
Sbjct: 257 RKTKMKSPGFG--------GIQVVGMSATLPNLGLLASWLDAELYCTDFRPVPLKEWVKI 308
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN IY M++VR L G D DH+V LC E V +GHSVL+FC S+ CE A +
Sbjct: 309 GNNIYDSSMNLVREFQPKLQLKG-DEDHVVSLCYETVCDGHSVLLFCPSKNWCEKLADII 367
Query: 800 SKFL----------KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYH 849
++ K S++ D E ID +D LRR +GLD VL+ TLP GVA+H
Sbjct: 368 AREFYSLQQAESSAKNSSLSPVVVDREGID--EVLDQLRRSLSGLDSVLQRTLPWGVAFH 425
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
HAGLT +ER+++E +R+ +RVL ATSTL++GVNLPARRVI R P G +D Y+Q
Sbjct: 426 HAGLTFDERDIIEGAFRQSTIRVLAATSTLSSGVNLPARRVIIRTPMFGGTLLDVLTYKQ 485
Query: 910 MAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK-----NGMTHAIL 964
MAGRAGR G+DT+GES+L+CKP E K LL S P+ SCL + + M AIL
Sbjct: 486 MAGRAGRKGVDTEGESILVCKPSERSKGTALLQGSLKPVRSCLLRKEGEGVASSMKRAIL 545
Query: 965 EVVAGGIVQTAEDIHRYVRCTLLNST--------KPFQDVVKSA--QDSLRWLCHRKFLE 1014
E++ G+ T +D+ Y CTLL S+ + QD V++ + + WL +F++
Sbjct: 546 EIIVSGVANTPDDVQTYASCTLLASSLKDNKRENEKEQDKVQTGPIEACIAWLLENEFIQ 605
Query: 1015 W-----NEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTP 1069
++ K++ T LG A SSL P E++ + DL RA + FVL +DLH+VYL TP
Sbjct: 606 VLERADDKKAKIFHPTHLGSATLSSSLSPTEAMEIFSDLQRAMKSFVLENDLHIVYLVTP 665
Query: 1070 INVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGL 1128
+ + DW ++ + +L A + V VG+ E +L R G +I++K
Sbjct: 666 VYEDWTTIDWYQFFCLWEKLPASMKRVAELVGIEEGFLARSVKG---KITAKTEK----- 717
Query: 1129 HGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQAL 1188
+YR + + KRF+ +L L L+ E P+ ++ + + +RG +Q+L
Sbjct: 718 ----QYR-------------QMAIHKRFFTSLALLDLISEVPLKDMTKKYGCSRGQLQSL 760
Query: 1189 QENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALY 1248
Q++A +A MV+VFC RLGW+++E L+++FQ+R++FGV E+ +L + + RAR LY
Sbjct: 761 QQSAATYAGMVTVFCNRLGWHNMELLLSQFQSRLTFGVHRELCDLVRVSLLNAQRARMLY 820
Query: 1249 KAGLRTPLAIAEASISEIVKAL 1270
AG T +A+AS ++ AL
Sbjct: 821 NAGFVTVADLAKASPGDVATAL 842
Score = 240 bits (612), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 176/553 (31%), Positives = 267/553 (48%), Gaps = 80/553 (14%)
Query: 1705 HNGCCRRVAQTRALCSVLWKL---LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGC 1761
H+G R ++ + +++ +L L E L + +E+P LA +EL GIG
Sbjct: 2063 HSGRYRAAIESVLIFNIMNQLHSELRKENLTDVFSKVEMPNHYCLALLELNGIGFSTAAY 2122
Query: 1762 LQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLP--------------- 1806
+ ++Q KL +E KAY LAG FSL + D+A VL+ LKLP
Sbjct: 2123 ETQKQVMQAKLTEIETKAYQLAGHSFSLTSPDDVAEVLFLELKLPQNGDVKVQGNKKTLG 2182
Query: 1807 ------IPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLAR 1860
I + + ST K L+ L+ HP+ +I E R + ++ + + R
Sbjct: 2183 YTRRTSIKGNRVRLSKQFSTTKDVLEKLKPLHPLPGLILEWRRINSAISKVVFPLQREKR 2242
Query: 1861 ISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMS--NEDIYGGNAEVDHC- 1917
+ + ++ QT TATGR+S EPN+Q V E +M E+ V C
Sbjct: 2243 FNSALGMERIYP-VSQTHTATGRVSFAEPNIQNVPRDFEIEMPIVVEESPPFRTHVYSCA 2301
Query: 1918 --------------------------------KINARDFFIPSQENWILLAADYSQIELR 1945
++ R F+P +IL AADY Q+ELR
Sbjct: 2302 VSRVRGRKHSSVLPSGVNTWTEDRTERRGIPFSVSMRHAFVPFPGGFIL-AADYCQLELR 2360
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
++AHFS+D LI +K DVF IAA W ++VG R Q K++ YGI+YG+G
Sbjct: 2361 ILAHFSRDCRLIEAFNK-GADVFKSIAAEWKMIDSEAVGDSTRQQAKQICYGIIYGIGAK 2419
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
+L EQ+ N+A I+SFKS + G+ +L VS+C + G+V+++ GR+R+L I+
Sbjct: 2420 SLGEQMGIDDNKAANYIESFKSRYTGIQKFLKETVSNCRRDGFVQTILGRRRYLPSIRDS 2479
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSII--VGGVYKPDSSLAANFQMLK-GR 2122
N K+ A+RQAVN+ QGSAADI+K A +NI + + V K L +FQ K GR
Sbjct: 2480 NPYIKAHAERQAVNTTVQGSAADIVKTATVNIQRRLEALSSVNKSHGHLENSFQRDKTGR 2539
Query: 2123 CR---------------LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKI 2167
+LQ+HDEL+ EV + + +V+ ME+A L V L VK+
Sbjct: 2540 LSRKRNREMLHPISGGFFILQLHDELLYEVAEDDVIQVAQIVKHEMENAVKLSVKLNVKV 2599
Query: 2168 QVGSTWGSLEPFQ 2180
++G +WG L+ +
Sbjct: 2600 KIGPSWGELQDLE 2612
>gi|410929499|ref|XP_003978137.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Takifugu
rubripes]
Length = 2305
Score = 601 bits (1549), Expect = e-168, Method: Compositional matrix adjust.
Identities = 352/865 (40%), Positives = 505/865 (58%), Gaps = 81/865 (9%)
Query: 458 KLDISSQGIDSITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSW-LPSEICSI 516
KL S Q + +P+ + P+ + A + + ++ L LSSW LP +
Sbjct: 116 KLQQSLQNQSASVLTAPSGLSFSPLNDTLPQPATSLHAPTGHEEKLLLSSWGLPKPVLER 175
Query: 517 YKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLV 576
YKK G++ ++ WQ +CL V VLQ NLVY A TSAGK+ V+E+LML+R++ T + AL +
Sbjct: 176 YKKHGVTHMFEWQAQCLTVGQVLQGANLVYSAPTSAGKTLVSELLMLKRVLETKRKALFI 235
Query: 577 LPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLE 636
LP+VS+ EK +L+ + E G V Y G+ VAVCTIEKANSL+NR++E
Sbjct: 236 LPFVSVAKEKMHYLQSVFEEAGVRVEGYMGSTSAAGGFTSLDVAVCTIEKANSLINRLIE 295
Query: 637 EGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADP 696
E + +G++V+DELHMV D RGYLLELLLTK+ Y A + + S E
Sbjct: 296 EDNMGLLGMVVVDELHMVGDSGRGYLLELLLTKICYIAQKQNTTGSFLE----------- 344
Query: 697 AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILT 756
G+QI+GMSAT+PN++ +A WL A LY+TN+RPVPL EY+KVG IY K + VVR +
Sbjct: 345 --GIQIIGMSATLPNLSLLASWLGAELYQTNYRPVPLHEYLKVGCNIYGKHLSVVRQFVP 402
Query: 757 AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSE 816
A N+ G D DHIV LC E V+EG SVL+FC S+ CE A ++ ++F +S ++E
Sbjct: 403 ALNIKGDD-DHIVSLCYETVREGCSVLLFCPSKNWCEKLADSIA---REFYNLRNSGEAE 458
Query: 817 ----FIDITSAIDA---LRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGL 869
+D +D LRR PAGLD +L+ T+P GVA+HHAGLT +ER+V+E +R+GL
Sbjct: 459 PPPVPLDQEGLVDVVAQLRRTPAGLDSILQRTVPWGVAFHHAGLTFDERDVLEGAFRQGL 518
Query: 870 VRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLIC 929
VRVL ATSTL++GVNLPARRVI R P +D Y+QM+GRAGR G+DT GES+L+C
Sbjct: 519 VRVLAATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMSGRAGRKGVDTIGESLLVC 578
Query: 930 KPEEVKKIMGLLNESCPPLHSCLSEDK-----NGMTHAILEVVAGGIVQTAEDIHRYVRC 984
K E + LL S P+ SCL + M AILE++ GG+ T +D+ Y C
Sbjct: 579 KEVERHNGISLLKGSLQPISSCLVRREGEGVTTSMLRAILEIIVGGVASTPQDVRLYASC 638
Query: 985 TLLNSTKPFQDVVK-----SAQDSLRWLCHRKFLEWNED---------TKLYSTTPLGRA 1030
+LL ++ +++ + + + + WL +F+ + +LY T LG A
Sbjct: 639 SLLAASSKLEELEEVTNKGAIEACVEWLMDNEFISIQKIGEGSTSYIFXELYCPTQLGAA 698
Query: 1031 AFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE-VEPDWELYYERFLELS 1089
SSL P ESL V DL RA +GFVL +DLH++YL TP+ E DW ++ + +LS
Sbjct: 699 TLSSSLSPPESLAVFADLQRAMKGFVLENDLHILYLITPLYAEWTTIDWYQFFCLWEQLS 758
Query: 1090 ALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQT 1149
+ + V VGV E +L R G + + K R +
Sbjct: 759 SSMKRVAELVGVQEGFLARSVSGKLIAKTEKQR-------------------------RQ 793
Query: 1150 LRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWY 1209
+ V KRF+ L+L LV E P+ V + +RG +Q+LQ++A +A MV+VFC+RLGW+
Sbjct: 794 MAVHKRFFTTLVLHDLVNEVPLGTVASKYSCSRGQLQSLQQSAATYAGMVTVFCKRLGWH 853
Query: 1210 DLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKA 1269
++E L++++Q R+SFG++ E+V+L I + RAR LY GL T +A A+++E+ KA
Sbjct: 854 NMELLLSQYQTRLSFGIQRELVDLVRISLLNAPRARTLYAQGLCTVSELARATVAEVEKA 913
Query: 1270 L-----FESS------SWIAEAQRR 1283
L F+SS S + A+RR
Sbjct: 914 LRNAVPFKSSKRAVDESEVEAAERR 938
Score = 256 bits (653), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 264/534 (49%), Gaps = 67/534 (12%)
Query: 1704 AHNGCCRRVAQ-----TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDM 1758
+H C R A T A+ S L LL + ++E ++E+P LA +EL G+G
Sbjct: 1775 SHTHCPRIRASITSVLTYAVMSHLTGLLQKDGVLEHFRSVEMPSQVCLALLELNGVGFST 1834
Query: 1759 EGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHP 1818
C + + ++Q KL LE +AY+LAG FSL + D+A VL+ L LP P G G +
Sbjct: 1835 AECERQKQVMQDKLTALESEAYSLAGHSFSLTSIDDVAQVLFLELHLP-PNGDVNGPKSK 1893
Query: 1819 -------------------STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLA 1859
ST K L+ LR HP+ VI E R ++ N + L
Sbjct: 1894 KTLGYGKRGGGRVRLGKQFSTTKDVLEKLRPLHPLPGVILEWR---RITNALTKVVFPLQ 1950
Query: 1860 RISMSTQKYTLHGHW--LQTSTATGRLSMEEPNLQCVEHMVEFKMSN------------- 1904
R K ++ + QT TATGR+S EPN+Q V E +M++
Sbjct: 1951 REKKHHSKLSMDRIYPIAQTHTATGRVSFTEPNIQNVPKDFEIQMASVVSKSPPSHDSCH 2010
Query: 1905 -----------EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
GG + I+ R F+P ++LAADYSQ+ELR++AH SKD
Sbjct: 2011 VITKKGHSVVPSGAAGGAEQGPAFSISMRLAFVPF-SGGMILAADYSQLELRVLAHLSKD 2069
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
L+ +L+ DVF IAA W SV R Q K++ YGI+YGMG +L EQ+
Sbjct: 2070 QRLLQVLNG-GADVFRCIAAEWKNVDPGSVTDGLRQQAKQICYGIIYGMGAKSLGEQMGV 2128
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
NEA I++FK+ + G+ ++L V +C + GYV++L GR+R+L I N K+ A
Sbjct: 2129 EENEAACYIETFKTRYRGINAFLKETVKNCGKNGYVQTLMGRRRYLPGITNTNAHVKAHA 2188
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR--------- 2124
+RQAVN+ QGSAADI+K+A +NI + Y + +CR
Sbjct: 2189 ERQAVNTSVQGSAADIVKLATVNIQKRL-RQTYPAAPPSHQHSPTGNSQCRTVTSQLRGG 2247
Query: 2125 -LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+LQ+HDEL+ E + + +V++ ME+A L V L K++VG +WG LE
Sbjct: 2248 YFILQLHDELIYETPEDDVIQVAQIVKREMETAVKLYVKLKAKVKVGPSWGDLE 2301
>gi|395844785|ref|XP_003795132.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta [Otolemur
garnettii]
Length = 2588
Score = 601 bits (1549), Expect = e-168, Method: Compositional matrix adjust.
Identities = 329/802 (41%), Positives = 475/802 (59%), Gaps = 75/802 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP+ + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 73 DKLLLANWGLPTAVLEKYHSFGVKKMFQWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 132
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K L +LP+VS+ EK +L+ L + +G V Y G+ V
Sbjct: 133 LLILKRVLEMRKKVLFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPTGRFSSLDV 192
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE +++ +G++V+DELHM+ D +RGYLLELLLTK+ Y + S
Sbjct: 193 AVCTIERANGLINRLIEENKMNLLGMVVVDELHMLGDSHRGYLLELLLTKICYITQKSAS 252
Query: 680 DSSSGENSGTSSGKADP-AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
S A P + +QIVGMSAT+PN+ VA WL A LY TNFRPVPL E +K
Sbjct: 253 ---------CQSDLASPLTNAVQIVGMSATLPNLDLVASWLNAELYHTNFRPVPLLESVK 303
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+GN++Y M +VR + G D DH+V LC E + + HSVL+FC S+K CE A
Sbjct: 304 IGNSLYDSSMKLVREFQPILQVKG-DEDHVVNLCYETICDNHSVLLFCPSKKWCEKLADT 362
Query: 799 VSKFLKKFSINVHSS------DSEFI-------DITSAIDALRRCPAGLDPVLEETLPSG 845
+++ N+H SEF D+ +D LRR P+GLD VL++T+P G
Sbjct: 363 IAREF----YNLHHQAQGLVKPSEFPPVMLEQKDLLEVMDQLRRLPSGLDSVLQKTVPWG 418
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGT 905
VA+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 419 VAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDVL 478
Query: 906 RYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNGMT 960
Y+QM GRAGR G+DT GES+L+CK E K M LL S P+ SCL E M
Sbjct: 479 TYKQMVGRAGRKGVDTVGESILVCKNAEKSKGMALLQGSLKPVRSCLQRREGEEVTASMI 538
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHR 1010
AILE++ GG+ T+ED+ Y CT L S K + ++ QDS++ WL
Sbjct: 539 RAILEIIVGGVASTSEDMQTYASCTFLAASMKKGKQGIQRNQDSVQLGAIEACVMWLLEN 598
Query: 1011 KFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY 1065
+F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH+VY
Sbjct: 599 EFIQMTEASDGTEGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVY 658
Query: 1066 LSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDS 1124
L TP+ + DW ++ + +L + V VGV E +L R G K+
Sbjct: 659 LVTPMFEDWTVIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVAR 711
Query: 1125 TKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGM 1184
T+ H + + + KRF+ +L+L L+ E P+ E+ + + RG
Sbjct: 712 TERQH------------------RQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCNRGQ 753
Query: 1185 VQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRA 1244
+Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FGV+ E+ +L + + RA
Sbjct: 754 IQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGVQRELCDLVRVSLLNAQRA 813
Query: 1245 RALYKAGLRTPLAIAEASISEI 1266
RALY +G T +A A+I+E+
Sbjct: 814 RALYASGFLTVADLARANIAEV 835
Score = 241 bits (615), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 215/733 (29%), Positives = 331/733 (45%), Gaps = 132/733 (18%)
Query: 1533 GLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEI 1592
GLA+CW YY++L K+ H L+ S D ++
Sbjct: 1900 GLAICWGRRDAYYISLQKE--QKHSEISASLVPPSLDPSLT------------------- 1938
Query: 1593 MEKRDVRKFTWNMK--VQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLK 1650
VR W+++ +Q + K +V I F + LL + L+
Sbjct: 1939 -----VRDRMWHLQSCLQKESDKERSVVIYDFIQTYKI------------LLLSCGISLE 1981
Query: 1651 DGI-DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAAN-RSGRWKNQMR---RAAH 1705
G D + W+L PD S P L V L E +G+ + A H
Sbjct: 1982 QGYEDPKVACWLLDPD---SKEPTLHSIVTSFLPHELPLLEGLETGQGIQSLGLNVSAEH 2038
Query: 1706 NGCCRRVAQTRAL---CSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCL 1762
+G R ++ + + L LL E L + +E+P LA +EL GIG C
Sbjct: 2039 SGRYRASVESILIFNSMNQLNSLLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECE 2098
Query: 1763 QARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNK--------- 1813
++++Q KL +E +A LAG FS ++ DIA VL+ LKLP P G K
Sbjct: 2099 SQKHIMQAKLDAIETQACQLAGHSFSFTSSDDIAEVLFLELKLP-PNGEMKNQCSKKTLG 2157
Query: 1814 --------------GKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLA 1859
G+Q ST K L+ L+ HP+ +I E R + + + +
Sbjct: 2158 STRRGNDKGCKLRLGRQF-STSKDVLNKLKALHPLPGLILEWRRITNAITKVIFPLQREK 2216
Query: 1860 RISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM----------------- 1902
R++ ++ Q+ TATGR++ EPN+Q V E KM
Sbjct: 2217 RLNPFLGMERIYP-VSQSHTATGRITFTEPNIQNVPRDFEIKMPTLVGESPPSQALGKGL 2275
Query: 1903 -------SNEDI---YGGNAEVDH--------CKINARDFFIPSQENWILLAADYSQIEL 1944
N+ +G A+++ ++ R F+P ++LAADYSQ+EL
Sbjct: 2276 FPMGRXRQNKGCGLKHGRQAQMEEKAADRGMPFSVSMRHAFVPF-PGGLILAADYSQLEL 2334
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R++AH S+D LI +L+ DVF IAA W +SVG R Q K++ YGI+YGMG
Sbjct: 2335 RILAHLSRDHRLIQVLNT-GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGA 2393
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
L EQ++ + N+A I SFKS + G+ ++ V +C + G+V+++ GR+R+L IK
Sbjct: 2394 KALGEQMDINENDAACYIDSFKSRYKGINHFMSETVKNCKRDGFVQTILGRRRYLPGIKD 2453
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSII--VGGVYKP----DSSLAANFQM 2118
N K+ A+RQA+N+ QGSAADI+KIA +NI + +K +S L +
Sbjct: 2454 NNPYHKAHAERQAINTKVQGSAADIVKIATVNIQKQLEAFQSTFKSHGHRESMLQNDRTG 2513
Query: 2119 LKGRCRL------------LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVK 2166
L + +L +LQ+HDEL+ EV + + + ME+A L V L VK
Sbjct: 2514 LLAKRKLQGMFCPIRGGFFILQLHDELLYEVAEEDVVQVSXXXKNEMENAIKLSVKLKVK 2573
Query: 2167 IQVGSTWGSLEPF 2179
+++GS+WG L+ F
Sbjct: 2574 VKIGSSWGELKDF 2586
>gi|395519083|ref|XP_003763681.1| PREDICTED: DNA polymerase theta [Sarcophilus harrisii]
Length = 2630
Score = 597 bits (1540), Expect = e-167, Method: Compositional matrix adjust.
Identities = 326/807 (40%), Positives = 480/807 (59%), Gaps = 73/807 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L+SW LP + Y+ G+ +++ WQ ECL + VL+ RNLVY A TSAGK+ VAE
Sbjct: 98 DKLLLASWGLPKAVLEKYQSFGVVQMFEWQAECLLLGQVLEGRNLVYSAPTSAGKTLVAE 157
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 158 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQNLFQEVGLLVEGYMGSCSPAVRFSALDI 217
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN LVNR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+RY T
Sbjct: 218 AVCTIERANGLVNRLIEEDKMDLLGMVVVDELHMLGDSHRGYLLELLLTKVRYV----TQ 273
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
+++ + TS D + +QI+GMSAT+PN+ VA WL A LY T+FRPVPL E +K+
Sbjct: 274 RAAARPENLTS----DFSKDIQIIGMSATLPNLDLVASWLNAELYHTDFRPVPLLESLKI 329
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DHIV LC E++ +G+SVLIFC S+ CE A +
Sbjct: 330 GNSIYDSSMKLVREFQPMLQVKG-DEDHIVSLCYEIICDGYSVLIFCPSKSWCEKLANII 388
Query: 800 SK-----------FLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAY 848
+ F+K ++ + D + + +D L+R P+GLD VL++T+P GVA+
Sbjct: 389 AHEFYDLQHQTQGFVKPPELHPVTLDQK--GLLEVVDQLKRLPSGLDSVLQQTVPWGVAF 446
Query: 849 HHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYR 908
HHAGLT EER+++E +R+GL+R+L ATSTL++GVNLPARRVI R P +D Y+
Sbjct: 447 HHAGLTFEERDIIEGAFRQGLIRILVATSTLSSGVNLPARRVIIRTPVFNGKCLDILTYK 506
Query: 909 QMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNG-----MTHAI 963
QM GRAGR G+DT GES+L+CK E K + LL S P+ S L + G M AI
Sbjct: 507 QMVGRAGRKGVDTVGESILVCKKMEKSKGIALLQGSLKPVCSSLQRREGGERTSSMIRAI 566
Query: 964 LEVVAGGIVQTAEDIHRYVRCTLLNST--------------KPFQDVVKSAQDSLRWLCH 1009
LE++ GG+ T ED+H Y CT L ++ K Q+ + +D + WL
Sbjct: 567 LEIIVGGVANTPEDVHTYASCTFLAASLKMEKQKSLKGDKQKMQQEQHGAIEDCVMWLLE 626
Query: 1010 RKFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
+F++ +E K+Y T LG A SSL P E+L + DL RA +GFVL +DLH+V
Sbjct: 627 NEFIQISEANVGIKKKVYHPTHLGSATLSSSLSPTEALDIFADLQRAMKGFVLENDLHIV 686
Query: 1065 YLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRD 1123
YL TP+ + DW ++ + +L + V VG+ E +L R G RI +K
Sbjct: 687 YLVTPLYEDWTAIDWYRFFCLWEKLPTSLKRVAELVGIEEGFLARCVKG---RIVAK--- 740
Query: 1124 STKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARG 1183
T+ H + + + KRF+ +L+L L+ E P+ ++ + + RG
Sbjct: 741 -TERQH------------------RQMAIHKRFFTSLVLLDLISEVPLKDIIQKYGCNRG 781
Query: 1184 MVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSR 1243
+Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FGV+ E+ +L + + R
Sbjct: 782 QIQSLQQSAATYAGMITVFSNRLGWHNMEQLLSQFQKRLTFGVQRELCDLVRVSLLNAQR 841
Query: 1244 ARALYKAGLRTPLAIAEASISEIVKAL 1270
ARALY AG T +A SI+E+ L
Sbjct: 842 ARALYTAGFLTVADLARGSIAEVEAVL 868
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 222/729 (30%), Positives = 335/729 (45%), Gaps = 138/729 (18%)
Query: 1533 GLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEI 1592
GLAVCW YYV+L ++ +H L S D N LT +L ++ ++I
Sbjct: 1950 GLAVCWGERDAYYVSLKQE--ENHSEISASLAPPSLDPN-LTVNERLWQLQASLQQI--F 2004
Query: 1593 MEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDG 1652
+E+R V + + IQ K +S G++L G SF
Sbjct: 2005 VEERSVIIYNF-----IQNYKMLLLSC----GISLAG----------SFE---------- 2035
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAAN-RSGRWKNQM---RRAAHNGC 1708
D + W+L PD S P L V + LS E +G+ + H+G
Sbjct: 2036 -DPKVACWLLDPD---SKEPTLHNIVTRFLSHELPLLEGIETGQGIQNLGLNTSGDHSGR 2091
Query: 1709 CRRVAQTRALCSVLWKLLVSEELI---EALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
+ ++ + + + +L + E + +E+P LA +EL GIG C +
Sbjct: 2092 YKAAIESILIFNSMTQLNLLLEKEKLQDVFCKVEMPSQYCLALLELNGIGFSTVECESQK 2151
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG--HNK---------- 1813
+++Q KL +E +AY L G FS + DIA VL+ LKLP P G NK
Sbjct: 2152 HVMQAKLSAIEAQAYELVGHSFSFTSPDDIAEVLFLELKLP-PNGVQGNKKTLGSTRRMI 2210
Query: 1814 --------GKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCT---------LGSIC 1856
GKQ ST K L L+ HP+ +I E R + + + S+
Sbjct: 2211 TNGRSSKLGKQF-STSKDVLKKLKTLHPLPGLILEWRRITNAITKVVFPLQREKCMNSVL 2269
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVE----------------- 1899
+ RI Y + QT +ATGR++ EPN+Q V E
Sbjct: 2270 GMERI------YPVS----QTHSATGRITFTEPNIQNVPRDFEIEIPAPVGESPPSQAQG 2319
Query: 1900 ----FKMSNEDIYGGNAEV---------DHCK---INARDFFIPSQENWILLAADYSQIE 1943
F+ S + Y N+ D K ++ R F+P ++LAADYSQ+E
Sbjct: 2320 RSLPFRKSKSN-YNINSRYQTLMAERVKDSGKPFSVSMRHAFVPF-PGGMILAADYSQLE 2377
Query: 1944 LRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMG 2003
LR++AH S+D L +L+ DVF IAA W ++VG + R Q K++ YGI+YGMG
Sbjct: 2378 LRILAHLSRDRRLTEVLNS-GADVFKSIAAEWKMIDLEAVGDEIRQQAKQICYGIIYGMG 2436
Query: 2004 PNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIK 2063
+L EQ+ N+A I+SFKS + G+ +L V +C++ G+V+++ GR+R+L IK
Sbjct: 2437 AKSLGEQMGIQENDAACYIESFKSRYSGIQRFLRETVKNCNRDGFVQTILGRRRYLPGIK 2496
Query: 2064 FGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIH-------SIIV------GGVYKPDS 2110
N +S A+RQA+N+ QGSAADI+K A +NI S+I ++
Sbjct: 2497 DQNPYSRSHAERQAINTTVQGSAADIVKTATVNIQRRLETLPSVIQSHGHRESNLHGDKP 2556
Query: 2111 SLAANFQMLKGRCR---LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKI 2167
L FQ + R +LQ+HDEL+ EV I + +V+ ME+A L V L VK+
Sbjct: 2557 GLKKGFQRIFCPIRGAFFILQLHDELLYEVAEDDIVQVAQIVKNEMENAVKLSVKLKVKV 2616
Query: 2168 QVGSTWGSL 2176
++G +WG L
Sbjct: 2617 KIGPSWGEL 2625
>gi|157888638|emb|CAE47762.2| novel protein similar to humna DNA-directed polymerase theta (POLQ)
[Danio rerio]
Length = 2239
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 326/801 (40%), Positives = 472/801 (58%), Gaps = 82/801 (10%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L LSSW LP + Y+ G+ +++ WQ ECL + VL+ +NLVY A TSAGK+ V+E
Sbjct: 13 DKLLLSSWGLPKPVLEKYQSLGVHRMFEWQAECLTLGKVLEGQNLVYSAPTSAGKTLVSE 72
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ T + A+ +LP+VS+ EK +L+ + + G V Y G+ V
Sbjct: 73 LLILKRVLETRQKAMFILPFVSVAREKMFYLQNVFQEAGIRVEGYMGSTSAAGGFSALDV 132
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIEKAN LVNR++EE +L +G +V+DELHMV D RGYLLELLLTK+RY A + T+
Sbjct: 133 AVCTIEKANGLVNRLIEEDKLDLLGTVVVDELHMVGDSGRGYLLELLLTKIRYIA-QKTA 191
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
+SG+++ T G+QI+GMSAT+PN+ +A WL A LY TN+RPVPL E++K+
Sbjct: 192 TRNSGQSTST---------GVQIIGMSATLPNLDLLARWLSAELYSTNYRPVPLMEWVKI 242
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
G IY + NLG D DHIV LC E VQ+GHS L+FC S+ CE A +
Sbjct: 243 GTNIYDGSL----------NLG--DDDHIVSLCFETVQDGHSALLFCPSKNWCEKLADSI 290
Query: 800 SKFLKKFSINVHSSD--------SEFIDITSAIDA---LRRCPAGLDPVLEETLPSGVAY 848
+ N+H + S F++ +D L+R PAGLD VL+ T+P GVA+
Sbjct: 291 GREF----YNLHHKEMQSGSGGQSIFLNQEGLLDVLAQLKRTPAGLDHVLQRTVPWGVAF 346
Query: 849 HHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYR 908
HHAGLT +ER+++E +R+G +RVL ATSTL++GVNLPARRVI R P +D Y+
Sbjct: 347 HHAGLTFDERDILEGAFRQGYIRVLAATSTLSSGVNLPARRVIIRTPVFNGHLLDILTYK 406
Query: 909 QMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK-----NGMTHAI 963
QM GRAGR G+DT GES+L+CK E K M L+ S P+ SCL + + M AI
Sbjct: 407 QMVGRAGRKGVDTIGESVLVCKEAERAKGMSLIQGSLKPISSCLVKREGEGVTTSMLRAI 466
Query: 964 LEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDS-----------LRWLCHRKF 1012
LE++ GG+ + +D+ Y CTLL ++ ++ + +S + WL +F
Sbjct: 467 LEIIVGGVASSPQDVRMYAACTLLAASIAAEEAHQDGSESEARNKGAIEACIEWLMDNEF 526
Query: 1013 LEWNE--DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI 1070
+ + D + Y T LG A SSL P E+L + DL RA +GFVL +DLH++Y TP+
Sbjct: 527 IHIQKEGDVERYCPTHLGSATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYQITPV 586
Query: 1071 NVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLH 1129
V+ DW ++ + +L + + V VG+ E +L R G + + K R
Sbjct: 587 YVDWTTIDWYQFFCLWEQLPSAMKRVAEMVGIQEGFLARSVGGKLIAKTEKQR------- 639
Query: 1130 GKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQ 1189
+ + + KRF+ L+L LV E P+ V + + +RG +Q+LQ
Sbjct: 640 ------------------RQMAIHKRFFTTLVLLDLVSEEPLGAVAKKYGCSRGQLQSLQ 681
Query: 1190 ENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYK 1249
++A +A MV+VFC RLGW++LE L+++FQ+R+SFGV+ E+ +L I + RAR LY
Sbjct: 682 QSASTYAGMVTVFCNRLGWHNLELLLSQFQSRLSFGVQRELCDLVRISLLTAQRARTLYS 741
Query: 1250 AGLRTPLAIAEASISEIVKAL 1270
+G T +A A +SE+ KAL
Sbjct: 742 SGFVTVAELARADVSEVEKAL 762
Score = 253 bits (647), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 181/519 (34%), Positives = 259/519 (49%), Gaps = 77/519 (14%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LL + ++ +E+P LA +EL GIG + C ++++Q KL LE +AY LAG
Sbjct: 1728 LLEKDGFLDVFKKVEMPTQYCLALLELNGIGFSIAECEAQKHVMQAKLSALESQAYQLAG 1787
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHP-------------------STDKHCL 1825
FSL + D+A VL+ LKLP P G G ++ ST K L
Sbjct: 1788 HSFSLTSPEDVAEVLFLELKLP-PNGDLNGLKNKKTLGYTRRAGARIKLSKQFSTTKDVL 1846
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L+ HP+ VI E R + L + + + + +H Q+ TATGR+S
Sbjct: 1847 EKLKPLHPLPGVILEWRRITNALTKVVFPLQREKKWHSHLKMDRIHP-ISQSHTATGRVS 1905
Query: 1886 MEEPNLQCVEHMVEFKM------SNEDIYGGNAE-VDHCKIN------------------ 1920
EPN+Q V E +M S GG+ KIN
Sbjct: 1906 FTEPNIQNVPKDFEIQMPTLIEESQTSQNGGSKMWCKRTKINRQLAPLLKVSDKSPDKGM 1965
Query: 1921 -----ARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARW 1975
R F+P ++LA DYSQ+ELR++AH S+D L+ +L+ DVF IAA W
Sbjct: 1966 QFSVSMRHAFVPFS-GGLILAVDYSQLELRILAHLSRDRRLLHVLNS-GADVFKSIAAEW 2023
Query: 1976 TGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASW 2035
SV R Q K++ YGI+YGMG +L EQ+ N+A I++FKS + G+ ++
Sbjct: 2024 KMVDPASVDDNMRQQAKQICYGIIYGMGAKSLGEQMGIEENDAACYIETFKSRYNGIQNF 2083
Query: 2036 LHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMI 2095
L V C + GYV++L GRKRFL IK N KS A+RQAVN+ QGSAADI+K+A I
Sbjct: 2084 LRETVQKCGKNGYVKTLLGRKRFLPGIKDSNVYIKSHAERQAVNTTVQGSAADIVKLATI 2143
Query: 2096 NIH-----------------SIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVD 2138
NI SI +GG ++ F+ L+G +LQ+HDEL+ EV
Sbjct: 2144 NIQRRIEEAFPGVPTSHQHPSIRLGGRHR------NQFRPLRG-GYFILQLHDELIYEVA 2196
Query: 2139 PSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+ + +V++ MES L V L VK++VG +WG+L+
Sbjct: 2197 EEDVIQVAQIVKREMESVVKLYVKLRVKVKVGPSWGNLQ 2235
>gi|291400571|ref|XP_002716686.1| PREDICTED: DNA polymerase theta isoform 1 [Oryctolagus cuniculus]
Length = 2585
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 326/802 (40%), Positives = 474/802 (59%), Gaps = 75/802 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP+ + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 68 DKLLLANWGLPTAVLEKYDSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 127
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 128 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSSSPAGRFSSLDI 187
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN LVNR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y + S
Sbjct: 188 AVCTIERANGLVNRLIEEDKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITQKSAS 247
Query: 680 DSSSGENSGTSSGKADP-AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+G A P ++ +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E IK
Sbjct: 248 ---------CRAGLASPLSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESIK 298
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+GN+IY M +VR ++ G D DHIV LC E +++ HSVL+FC S+K CE A
Sbjct: 299 IGNSIYDSSMKLVREFQPLLHVKG-DEDHIVSLCYETIRDNHSVLLFCPSKKWCEKLADV 357
Query: 799 VSKFLKKFSINVHSSDSEFID-------------ITSAIDALRRCPAGLDPVLEETLPSG 845
V++ N+H E + + ID L+R P+GLD VL++T+P G
Sbjct: 358 VAREF----YNLHHQVEELVKPPEFPPVILEKKGLLEVIDQLKRLPSGLDSVLQKTIPWG 413
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGT 905
VA+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 414 VAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRTLDIL 473
Query: 906 RYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL-----SEDKNGMT 960
Y+QM GRAGR G+DT GES+L+CK E K + LL S P+ SCL E M
Sbjct: 474 TYKQMVGRAGRKGVDTVGESILVCKNSEKSKGVALLQGSLKPVRSCLRKLEGEEVTASMV 533
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDS---------LRWLCHR 1010
AILE++ G + T++D+ Y CT L S K + ++ QDS + WL
Sbjct: 534 RAILEIIVGRVASTSQDMETYASCTFLAASMKEGKQGIQKNQDSGQLGAIEACVMWLLEN 593
Query: 1011 KFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY 1065
+F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH+VY
Sbjct: 594 EFIQITEASDGTEGKIYHPTQLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVY 653
Query: 1066 LSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDS 1124
L TP+ + DW ++ + +L + V VGV E +L R G K+
Sbjct: 654 LVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVIAR 706
Query: 1125 TKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGM 1184
T+ H + + + KRF+ +L+L L+ E P+ E+ + + RG
Sbjct: 707 TERQH------------------RQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCNRGQ 748
Query: 1185 VQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRA 1244
+Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L I + RA
Sbjct: 749 IQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRISLLNAQRA 808
Query: 1245 RALYKAGLRTPLAIAEASISEI 1266
R LY +G T +A A+I+E+
Sbjct: 809 RFLYASGFLTVADLARATIAEV 830
Score = 241 bits (614), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 262/531 (49%), Gaps = 81/531 (15%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LL E+L + +E+P LA +EL GIG ++++Q KL +E +AY LAG
Sbjct: 2058 LLQKEKLQDIFHKVEMPSQYCLALLELNGIGFSTAESESQKHIMQAKLDAIETQAYQLAG 2117
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPEGHNKGK----------------------QHPSTDK 1822
FS ++ DIA VL+ LKLP P G K + + ST K
Sbjct: 2118 HSFSFTSSDDIAEVLFLELKLP-PNGEMKSQGCKKTLGSTRRGNDKGCKLKLGRQLSTSK 2176
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATG 1882
L+ L+ HP+ +I E R + + + + R++ ++ Q+ TATG
Sbjct: 2177 DVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-VSQSHTATG 2235
Query: 1883 RLSMEEPNLQCVEHMVEFKM------SNEDIYGGNA--------EVDHCKINA------- 1921
R++ EPN+Q V E KM S + G + C +N
Sbjct: 2236 RITFIEPNIQNVPRDFEIKMPTLVGESPPPLVQGKGLLPKSRGPDEKDCTLNPKPWAQME 2295
Query: 1922 --------------RDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDV 1967
R F+P ++LAADYSQ+ELR++AH S+D LI +L+ DV
Sbjct: 2296 ERASDRGIPFSVSMRHAFVPF-PGGLILAADYSQLELRILAHLSQDRRLIQVLNTGE-DV 2353
Query: 1968 FTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKS 2027
F IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A I SFKS
Sbjct: 2354 FRSIAAEWRMMEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKS 2413
Query: 2028 SFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAA 2087
+ G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQA+N+ QGSAA
Sbjct: 2414 RYTGINHFMKETVKNCRRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTTVQGSAA 2473
Query: 2088 DIIKIAMINI-------HSIIVG-----GVYKPDSS-------LAANFQMLKGRCRLLLQ 2128
DI+KIA +NI HS GV + D + L F ++G +LQ
Sbjct: 2474 DIVKIATVNIQKQLETFHSTFKSHGHREGVLQSDKTGLFPKRRLPGVFCPVRGGF-FILQ 2532
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+HDEL+ EV + + +V+ ME+A L V L VK+++G++WG L+ F
Sbjct: 2533 LHDELLYEVAEEDVVQVAQIVKNEMENAIKLSVKLKVKVKIGASWGELKDF 2583
>gi|332817593|ref|XP_001165150.2| PREDICTED: DNA polymerase theta isoform 1 [Pan troglodytes]
gi|397509626|ref|XP_003825218.1| PREDICTED: DNA polymerase theta [Pan paniscus]
gi|410355515|gb|JAA44361.1| polymerase (DNA directed), theta [Pan troglodytes]
Length = 2596
Score = 594 bits (1532), Expect = e-166, Method: Compositional matrix adjust.
Identities = 323/801 (40%), Positives = 475/801 (59%), Gaps = 73/801 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 73 DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 132
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 133 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDI 192
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y T
Sbjct: 193 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI----TR 248
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S+S + SS ++ +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E +KV
Sbjct: 249 KSASCQADLASS----LSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKV 304
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DH+V LC E +++ HSVL+FC S+K CE A +
Sbjct: 305 GNSIYDSSMKLVREFEPMLQVKG-DEDHVVSLCYETIRDNHSVLLFCPSKKWCEKLADII 363
Query: 800 SKFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPAGLDPVLEETLPSGV 846
++ N+H + ++ +D LRR P+GLD VL++T+P GV
Sbjct: 364 AREF----YNLHHQAEGLVKPSECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGV 419
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
A+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 420 AFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILT 479
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNGMTH 961
Y+QM GRAGR G+DT GES+LICK E K + LL S P+ SCL E M
Sbjct: 480 YKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTASMIR 539
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHRK 1011
AILE++ GG+ T++D+H Y CT L S K + ++ Q+S++ WL +
Sbjct: 540 AILEIIVGGVASTSQDMHTYAACTFLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENE 599
Query: 1012 FLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH++YL
Sbjct: 600 FIQSTEASDGTEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYL 659
Query: 1067 STPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDST 1125
TP+ + DW ++ + +L + V VGV E +L R G K+ T
Sbjct: 660 VTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVART 712
Query: 1126 KGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMV 1185
+ H + + + KRF+ +L+L L+ E P+ E+ + + RG +
Sbjct: 713 ERQH------------------RQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQI 754
Query: 1186 QALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1245
Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR
Sbjct: 755 QSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRAR 814
Query: 1246 ALYKAGLRTPLAIAEASISEI 1266
LY +G T +A A+I E+
Sbjct: 815 VLYASGFHTVADLARANIVEV 835
Score = 244 bits (624), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 265/533 (49%), Gaps = 79/533 (14%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 2066 LNSLLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQ 2125
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIP--EGHNKGKQHP--------------------S 1819
LAG FS ++ DIA VL+ LKLP P E N+G + S
Sbjct: 2126 LAGHSFSFTSSDDIAEVLFLELKLP-PNREMKNQGSKKTLGSTRRGIDNGRKLRLGRQFS 2184
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTST 1879
T K L+ L+ HP+ +I E R + + + + R++ ++ Q+ T
Sbjct: 2185 TSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-VSQSHT 2243
Query: 1880 ATGRLSMEEPNLQCVEHMVEFKMSN-------------------EDIYGGNAEVD-HCK- 1918
ATGR++ EPN+Q V E KM Y V+ C+
Sbjct: 2244 ATGRITFIEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGKYKKGFSVNPRCQA 2303
Query: 1919 --------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
I+ R F+P IL AADYSQ+ELR++AH S D LI +L+
Sbjct: 2304 QMEERAADRGMPFSISMRHAFVPFPGGSIL-AADYSQLELRILAHLSHDRRLIQVLNT-G 2361
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A I S
Sbjct: 2362 ADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDS 2421
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
FKS + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQA+N+I QG
Sbjct: 2422 FKSRYTGINQFMTETVKNCKRDGFVQTILGRRRYLPGIKDNNPYRKAHAERQAINTIVQG 2481
Query: 2085 SAADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQMLKGR-CRL-----L 2126
SAADI+KIA +NI HS G+ + D + + + L+G C + +
Sbjct: 2482 SAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDRTGLSRKRKLQGMFCPIRGGFFI 2541
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
LQ+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L+ F
Sbjct: 2542 LQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDF 2594
>gi|139394648|ref|NP_955452.3| DNA polymerase theta [Homo sapiens]
gi|325511332|sp|O75417.2|DPOLQ_HUMAN RecName: Full=DNA polymerase theta; AltName: Full=DNA polymerase eta
gi|225000062|gb|AAI72289.1| Polymerase (DNA directed), theta [synthetic construct]
Length = 2590
Score = 593 bits (1530), Expect = e-166, Method: Compositional matrix adjust.
Identities = 324/809 (40%), Positives = 477/809 (58%), Gaps = 73/809 (9%)
Query: 493 PSSSGMLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTS 551
P+ +D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TS
Sbjct: 59 PTVPDYERDKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTS 118
Query: 552 AGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGG 611
AGK+ VAE+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+
Sbjct: 119 AGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPS 178
Query: 612 SLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLR 671
+AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+
Sbjct: 179 RHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKIC 238
Query: 672 YAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPV 731
Y T S+S + SS ++ +QIVGMSAT+PN+ VA WL A LY T+FRPV
Sbjct: 239 YI----TRKSASCQADLASS----LSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPV 290
Query: 732 PLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKG 791
PL E +KVGN+IY M +VR + G D DH+V LC E + + HSVL+FC S+K
Sbjct: 291 PLLESVKVGNSIYDSSMKLVREFEPMLQVKG-DEDHVVSLCYETICDNHSVLLFCPSKKW 349
Query: 792 CESTARHVSKFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPAGLDPVL 838
CE A +++ N+H + ++ +D LRR P+GLD VL
Sbjct: 350 CEKLADIIAREF----YNLHHQAEGLVKPSECPPVILEQKELLEVMDQLRRLPSGLDSVL 405
Query: 839 EETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIG 898
++T+P GVA+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G
Sbjct: 406 QKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFG 465
Query: 899 RDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----- 953
+D Y+QM GRAGR G+DT GES+LICK E K + LL S P+ SCL
Sbjct: 466 GRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRREGE 525
Query: 954 EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR------- 1005
E M AILE++ GG+ T++D+H Y CT L S K + ++ Q+S++
Sbjct: 526 EVTGSMIRAILEIIVGGVASTSQDMHTYAACTFLAASMKEGKQGIQRNQESVQLGAIEAC 585
Query: 1006 --WLCHRKFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLA 1058
WL +F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL
Sbjct: 586 VMWLLENEFIQSTEASDGTEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLE 645
Query: 1059 SDLHLVYLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRI 1117
+DLH++YL TP+ + DW ++ + +L + V VGV E +L R G
Sbjct: 646 NDLHILYLVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG----- 700
Query: 1118 SSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCET 1177
K+ T+ H + + + KRF+ +L+L L+ E P+ E+ +
Sbjct: 701 --KVVARTERQH------------------RQMAIHKRFFTSLVLLDLISEVPLREINQK 740
Query: 1178 FKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIP 1237
+ RG +Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L +
Sbjct: 741 YGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVS 800
Query: 1238 YVKGSRARALYKAGLRTPLAIAEASISEI 1266
+ RAR LY +G T +A A+I E+
Sbjct: 801 LLNAQRARVLYASGFHTVADLARANIVEV 829
Score = 245 bits (626), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 265/543 (48%), Gaps = 105/543 (19%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY LAG
Sbjct: 2063 LLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAG 2122
Query: 1785 MKFSLYTAADIANVLYGHLKLPIP--EGHNKGKQHP--------------------STDK 1822
FS ++ DIA VL+ LKLP P E N+G + ST K
Sbjct: 2123 HSFSFTSSDDIAEVLFLELKLP-PNREMKNQGSKKTLGSTRRGIDNGRKLRLGRQFSTSK 2181
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLA-------------KLLNCTLGSICSLARISMSTQKYT 1869
L+ L+ HP+ +I E R + K LN LG + RI +Q +T
Sbjct: 2182 DVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKCLNPFLG----MERIYPVSQSHT 2237
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN-------------------EDIYGG 1910
ATGR++ EPN+Q V E KM Y
Sbjct: 2238 ----------ATGRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGKYKK 2287
Query: 1911 NAEVD-HCK---------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
V+ C+ I+ R F+P IL AADYSQ+ELR++AH S D
Sbjct: 2288 GFSVNPRCQAQMEERAADRGMPFSISMRHAFVPFPGGSIL-AADYSQLELRILAHLSHDR 2346
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
LI +L+ DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+
Sbjct: 2347 RLIQVLNT-GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIK 2405
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
N+A I SFKS + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+
Sbjct: 2406 ENDAACYIDSFKSRYTGINQFMTETVKNCKRDGFVQTILGRRRYLPGIKDNNPYRKAHAE 2465
Query: 2075 RQAVNSICQGSAADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQMLKGR 2122
RQA+N+I QGSAADI+KIA +NI HS G+ + D + + + L+G
Sbjct: 2466 RQAINTIVQGSAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDQTGLSRKRKLQGM 2525
Query: 2123 -CRL-----LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
C + +LQ+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L
Sbjct: 2526 FCPIRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGEL 2585
Query: 2177 EPF 2179
+ F
Sbjct: 2586 KDF 2588
>gi|395733254|ref|XP_002813286.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta [Pongo abelii]
Length = 2597
Score = 593 bits (1530), Expect = e-166, Method: Compositional matrix adjust.
Identities = 328/800 (41%), Positives = 478/800 (59%), Gaps = 71/800 (8%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 73 DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 132
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 133 LLILKRVLEMQKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDI 192
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y T
Sbjct: 193 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI----TW 248
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S+S + SS ++ +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E +KV
Sbjct: 249 KSASCQADLASS----VSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKV 304
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA--- 796
GN+IY M +VR + G D DH+V LC E +++ HSVL+FC S+K CE A
Sbjct: 305 GNSIYDSSMKLVREFEPMLQVKG-DEDHVVSLCYETIRDNHSVLLFCPSKKWCEKLADII 363
Query: 797 -------RHVSKFLKKFS--INVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVA 847
RH ++ L K S V E +++ +D LRR P+GLD VL++T+P GVA
Sbjct: 364 AREFYNLRHQAEGLVKPSECPPVILEQKELLEV---MDQLRRLPSGLDSVLQKTIPWGVA 420
Query: 848 YHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY 907
+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D Y
Sbjct: 421 FHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTY 480
Query: 908 RQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNGMTHA 962
+QM GRAGR G+DT GES+LICK E K + LL S P+ SCL E M A
Sbjct: 481 KQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTASMIRA 540
Query: 963 ILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHRKF 1012
ILE++ GG+ T++D+H Y CT L S K + ++ Q+S++ WL +F
Sbjct: 541 ILEIIVGGVASTSQDMHTYAACTFLAASMKDGKQGIQRNQESVQLGAIEACVMWLLENEF 600
Query: 1013 LEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLS 1067
++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH++YL
Sbjct: 601 IQSTEASDGTEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLV 660
Query: 1068 TPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTK 1126
TP+ + DW ++ + +L + V VGV E +L R G K+ T+
Sbjct: 661 TPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVARTE 713
Query: 1127 GLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQ 1186
H + + + KRF+ +L+L L+ E P+ E+ + + RG +Q
Sbjct: 714 RQH------------------RQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQ 755
Query: 1187 ALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARA 1246
+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR
Sbjct: 756 SLQQSAAVYAGMITVFSNRLGWHNMELLLSEFQKRLTFGIQRELCDLVRVSLLNAQRARV 815
Query: 1247 LYKAGLRTPLAIAEASISEI 1266
LY +G T +A A+I E+
Sbjct: 816 LYASGFHTVADLARANIVEV 835
Score = 243 bits (619), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 266/532 (50%), Gaps = 82/532 (15%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQA-RNLLQKKLRYLEKKAYTLA 1783
LL E L + +E+P L+ +EL GIG C ++ ++++Q KL +E +AY LA
Sbjct: 2069 LLQKENLQDVFRKVEMPSQYCLSLLELNGIGFSTAECYESQKHIMQAKLEAIETQAYQLA 2128
Query: 1784 GMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHPST 1820
G FS ++ DIA VL+ LKLP P G K G+Q ST
Sbjct: 2129 GHSFSFTSSDDIAEVLFLELKLP-PNGEMKNQGSKKTLGSTRRGIDNGRKLRLGRQF-ST 2186
Query: 1821 DKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTA 1880
K L+ L+ HP+ +I E R + + + + R++ ++ Q+ TA
Sbjct: 2187 SKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-VSQSHTA 2245
Query: 1881 TGRLSMEEPNLQCVEHMVEFKMSN-------------------EDIYGGNAEVD-HCK-- 1918
TGR++ EPN+Q V E KM Y ++ C+
Sbjct: 2246 TGRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGKYKKGCSLNPRCQAQ 2305
Query: 1919 -------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG 1965
I+ R F+P ++LAADYSQ+ELR++AH S D LI +L+
Sbjct: 2306 MEERAADRGMPFSISMRHAFVPF-PGGLILAADYSQLELRILAHLSHDRRLIQVLNT-GA 2363
Query: 1966 DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSF 2025
DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A I SF
Sbjct: 2364 DVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSF 2423
Query: 2026 KSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGS 2085
KS + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQA+N+ QGS
Sbjct: 2424 KSRYTGINQFMTETVKNCKRDGFVQTILGRRRYLPGIKDNNPYRKAHAERQAINTTVQGS 2483
Query: 2086 AADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQMLKGR-CRL-----LL 2127
AADI+KIA +NI HS G+ + D + + + L+G C + +L
Sbjct: 2484 AADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDRTGLSQKRKLQGMFCPIRGGFFIL 2543
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
Q+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L+ F
Sbjct: 2544 QLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDF 2595
>gi|334329765|ref|XP_003341262.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like
[Monodelphis domestica]
Length = 2581
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 338/854 (39%), Positives = 492/854 (57%), Gaps = 83/854 (9%)
Query: 477 VIKKPVGNEKSDEAGTPSSSGMLK---------DCLDLSSW-LPSEICSIYKKRGISKLY 526
V+ P G E S T S G K D L L+SW LP + Y G+ +++
Sbjct: 50 VLSPPPGLELSLRRSTLPSPGSCKPIVVPENQIDKLLLASWGLPKAVLEKYHSLGVVQMF 109
Query: 527 PWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEK 586
WQ ECL + VL+ RNLVY A TSAGK+ VAE+L+L+R++ K AL +LP++S+ EK
Sbjct: 110 EWQAECLLLGQVLEGRNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFISVAKEK 169
Query: 587 AEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGII 646
+L+ L + +G V Y G+ +AVCTIE+AN LVNR++EE ++ +G++
Sbjct: 170 KYYLQNLFQEVGLLVEGYMGSCSPTVRFSALDIAVCTIERANGLVNRLIEENKMDLLGMV 229
Query: 647 VIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMS 706
V+DELHM+ D +RGYLLELLLTK+RY ++S EN +D + +QIVGMS
Sbjct: 230 VVDELHMLGDAHRGYLLELLLTKVRYVTQRA---AASPENL-----TSDFSKDIQIVGMS 281
Query: 707 ATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPD 766
AT+PN+ VA WL A LY T+FRPVPL E +K+GN+IY M +VR + G D D
Sbjct: 282 ATLPNLDLVASWLNAELYHTDFRPVPLVESLKIGNSIYDSSMKLVREFQPMLQVKG-DED 340
Query: 767 HIVELCDEVVQEGHSVLIFCSSRKGCESTA-----------RHVSKFLKKFSINVHSSDS 815
HIV LC E++++G+SVLIFC S+ CE A R K ++ + D
Sbjct: 341 HIVSLCYEIIRDGYSVLIFCXSKNWCEKLANIIAHEFCDLQRQAEALAKPPELHPIALDH 400
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
+ + +D L+R P+GLD VL++T+P GVA+HHAGLT EER+++E +R+GL+RVL A
Sbjct: 401 K--GLAEVVDQLKRLPSGLDSVLQQTVPWGVAFHHAGLTFEERDIIEGAFRQGLLRVLAA 458
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVK 935
TSTL++GVNLPARRVI R P +D Y+QMAGRAGR G+DT GES+L+CK E
Sbjct: 459 TSTLSSGVNLPARRVIIRTPVFNGQCLDILTYKQMAGRAGRKGVDTIGESILVCKKSEKS 518
Query: 936 KIMGLLNESCPPLHSCLSEDKNG-----MTHAILEVVAGGIVQTAEDIHRYVRCTLLNST 990
K + LL S P+ S L + G M AILE++ GG+ T +D+ Y CT L ++
Sbjct: 519 KGISLLQGSLKPVCSSLQRREGGETTASMIRAILEIIVGGVANTPKDVQIYASCTFLAAS 578
Query: 991 KPF--QDVVKSAQDSLR------------WLCHRKFLEWNE-----DTKLYSTTPLGRAA 1031
Q +K + +R WL +F++ +E K+Y T LG A
Sbjct: 579 LKMEKQKSLKGEKQKIRQEQHGAIEACVMWLLENEFIQVSEANGETKEKVYHPTHLGSAT 638
Query: 1032 FGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE-VEPDWELYYERFLELSA 1090
SSL P E+L + DL RA +GFVL +DLH+VYL TP+ + DW ++ + +L
Sbjct: 639 LSSSLSPTEALDIFADLQRAMKGFVLENDLHIVYLVTPLYEDWTAIDWYRFFCLWEKLPV 698
Query: 1091 LDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTL 1150
+ V VG+ E +L R G RI +K T+ H + +
Sbjct: 699 SLKRVAELVGIEEGFLARSVKG---RIVAK----TEKQH------------------RQM 733
Query: 1151 RVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYD 1210
+ KRF+ +L+L L+ E P+ ++ + + +RG +Q+LQ++A +A M++VF RLGW++
Sbjct: 734 AIHKRFFTSLVLLDLISEVPLKDIIQKYGCSRGQIQSLQQSAATYAGMITVFSNRLGWHN 793
Query: 1211 LEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
+E L+++FQ R++FGV+ E+ +L + + RARALY AG T +A +E V+A+
Sbjct: 794 MEQLLSQFQKRLTFGVQRELCDLVRVSLLNAQRARALYAAGFVTVADLARGRAAE-VEAV 852
Query: 1271 FESSSWIAEAQRRV 1284
+SS +R V
Sbjct: 853 LKSSLPFRSVRRAV 866
Score = 243 bits (621), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 219/735 (29%), Positives = 322/735 (43%), Gaps = 148/735 (20%)
Query: 1533 GLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEI 1592
GLAVCW YY++L ++ H L S D N+ + +R +++
Sbjct: 1899 GLAVCWGERDAYYLSLQQEEL--HSEISASLAPPSLDPNL--------TVNERLRQLQAC 1948
Query: 1593 MEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDG 1652
++ V+ + + IQ K +S G++L G + +D
Sbjct: 1949 LQHVSVKGRSVIIYNFIQNYKTLLLSC----GISLAG------------------NFEDP 1986
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAA-----------------AAANRSGR 1695
C W+L PD S P L V LS E + + SGR
Sbjct: 1987 KVAC---WLLDPD---SKEPTLHNIVTSFLSHELPLLEGIETGEGIQNLGLNTSDDHSGR 2040
Query: 1696 WKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIG 1755
+K AA T+ L LL E+L + +E+P LA +EL GIG
Sbjct: 2041 YK-----AAIESILVFNTMTQ-----LNSLLEKEKLHDVFCKVEMPSQYCLALLELNGIG 2090
Query: 1756 VDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG----- 1810
C ++++Q KL LE +AY LAG FS + DIA VL+ LKLP P G
Sbjct: 2091 FSTTECENQKHVMQAKLNALEAQAYELAGHSFSFTSPDDIAEVLFLELKLP-PNGIQVKK 2149
Query: 1811 ---------------HNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSI 1855
GKQ ST K L L++ HP+ +I E R + + + +
Sbjct: 2150 KTLGSTRRMNTNGRTTKMGKQF-STSKDILKKLKNLHPLPGLILEWRRITNAITKVVFPL 2208
Query: 1856 ----CSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM--------- 1902
C + M + Y L QT TATGR++ EPN+Q V E +M
Sbjct: 2209 QREKCMNPVLGME-RLYPLS----QTHTATGRITFTEPNIQNVPRDFEIEMPTLVGESPS 2263
Query: 1903 ------------------SNEDIYGGNAEVDHCKINARDFFIPSQENWI------LLAAD 1938
SN + K N + F + + ++ +LAAD
Sbjct: 2264 FQAQGRSLPFKSRXKESKSNINSAYQMQLAARIKDNGKPFSVSMRHAFVPFPGGMILAAD 2323
Query: 1939 YSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGI 1998
YSQ+ELR++AH S+D LI +L+ DVF IAA W ++VG R Q K++ YGI
Sbjct: 2324 YSQLELRILAHLSRDRRLIEVLNG-GADVFKSIAAEWKMVDPEAVGDDLRQQAKQICYGI 2382
Query: 1999 LYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF 2058
+YGMG +L EQ+ N+A I SFKS + G+ +L V +C + G+V+++ GR+R+
Sbjct: 2383 IYGMGAKSLGEQMGIQENDAACYIDSFKSRYTGIQRFLRETVKNCSKDGFVQTILGRRRY 2442
Query: 2059 LSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIH-----------------SII 2101
L I N KS A+RQA+N+ QGSAADI+K A +NI S +
Sbjct: 2443 LPGINDQNPYNKSHAERQAINTTVQGSAADIVKTATVNIQSRLEALPSVAQSHGHRESTL 2502
Query: 2102 VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLV 2161
G + F +KG +LQ+HDEL+ EV + + +V+ ME+A L V
Sbjct: 2503 GGARTRLKKGFQRQFCPVKG-AFFILQLHDELLYEVAEEDVVQVAQIVKNEMENAVKLSV 2561
Query: 2162 PLLVKIQVGSTWGSL 2176
L VK+++G +WG L
Sbjct: 2562 KLKVKVKMGPSWGEL 2576
>gi|354477870|ref|XP_003501141.1| PREDICTED: DNA polymerase theta-like isoform 1 [Cricetulus griseus]
Length = 2571
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 325/802 (40%), Positives = 470/802 (58%), Gaps = 78/802 (9%)
Query: 501 DCLDLSSWL-PSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W P + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 66 DQLLLANWGDPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 125
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 126 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSSSPTGRFSSLDI 185
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y + T
Sbjct: 186 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYVTRKSTL 245
Query: 680 DSSSGENSGTSSGKADPAHGL----QIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
+AD A L QIVGMSAT+PN+ VA WL A LY T+FRPVPL E
Sbjct: 246 ------------CQADSARALCNAVQIVGMSATLPNLQLVASWLDAELYHTDFRPVPLLE 293
Query: 736 YIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCEST 795
IK+GN+IY M +VR + + G D DHIV LC E V + HSVL+FC S+K CE
Sbjct: 294 SIKIGNSIYDSSMKLVRELQPVLQVKG-DEDHIVSLCYETVCDNHSVLLFCPSKKWCEKV 352
Query: 796 ARHVSKFLKKFSINVHSSD------SEFIDIT-------SAIDALRRCPAGLDPVLEETL 842
A +++ N+H SEF + +D L+R P+GLD VL+ T+
Sbjct: 353 ADIIAREF----YNLHHQPERLVKPSEFPPVNLDQKSLLEVMDQLKRSPSGLDSVLKNTV 408
Query: 843 PSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFI 902
P GVA+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +
Sbjct: 409 PWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPVFGGQTL 468
Query: 903 DGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL--SEDKNGMT 960
D Y+QM GRAGR G+DT GES+L+CKP E K + LL S P+HSCL E M
Sbjct: 469 DILTYKQMVGRAGRKGVDTMGESILVCKPSEKSKGVALLQGSLEPVHSCLQRQEVTANMI 528
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHR 1010
AILE++ GG+ T++D+ Y CT L + K + ++ QD + WL
Sbjct: 529 RAILEIIVGGVASTSQDMQTYASCTFLAAAVKEGKQGIQRNQDDVHFGAIDACVTWLLEN 588
Query: 1011 KFLEWNEDT-----KLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY 1065
+F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH+VY
Sbjct: 589 EFIQEAEPSDGSGGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVY 648
Query: 1066 LSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDS 1124
L TP+ + DW ++ + +L + V VGV E +L R G K+
Sbjct: 649 LVTPVFEDWTGIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVAR 701
Query: 1125 TKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGM 1184
T H + + + KRF+ +L+L L+ E P+ E+ + + RG
Sbjct: 702 TDRQH------------------RQMAIHKRFFTSLVLLDLISEIPLKEINQKYGCNRGQ 743
Query: 1185 VQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRA 1244
+Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RA
Sbjct: 744 IQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLIRVSLLNAQRA 803
Query: 1245 RALYKAGLRTPLAIAEASISEI 1266
R LY +G T +A A+++E+
Sbjct: 804 RFLYASGFLTVADLARANVAEV 825
Score = 259 bits (662), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 265/535 (49%), Gaps = 83/535 (15%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 2041 LNSLLQKENLHDIFCKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQ 2100
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHP 1818
LAG FS +A DIA VL+ LKLP P G K G+Q
Sbjct: 2101 LAGHSFSFTSADDIAQVLFLELKLP-PNGEMKMQGSKKTLGSTRRGNENGHKLRLGRQF- 2158
Query: 1819 STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTS 1878
ST K L+ L+ HP+ +I E R ++ + + + R++ + L+ Q+
Sbjct: 2159 STSKDVLNKLKALHPLPGLILEWRRISNAITKVVFPLQREKRLNPFLRMERLYP-VSQSH 2217
Query: 1879 TATGRLSMEEPNLQCVEHMVEFKM-----------------------SNEDIYG---GNA 1912
TATGR++ EPN+Q V E KM N+ YG GN
Sbjct: 2218 TATGRITFIEPNIQNVPRDFEIKMPTVVRESPPSQAPGKRLLPMTRGQNKKFYGLHPGNG 2277
Query: 1913 EVDHCK---------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP 1963
+ K ++ R F+P ++LAADYSQ+ELR++AH S+D LI +L+
Sbjct: 2278 TLMEEKASDRGVPFSVSMRHAFVPF-PGGVILAADYSQLELRILAHLSRDCRLIQVLNT- 2335
Query: 1964 HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIK 2023
DVF IAA W DSVG R Q K++ YGI+YGMG +L EQ+ N+A I
Sbjct: 2336 GADVFRSIAAEWKMIEPDSVGEDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYID 2395
Query: 2024 SFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQ 2083
SFKS + G+ +L V C + G+V+++ GR+R+L IK N K+ A+RQA+N+ Q
Sbjct: 2396 SFKSRYTGINHFLRDTVKKCRRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTTVQ 2455
Query: 2084 GSAADIIKIAMINI-------HSIIVGGVYK------------PDSSLAANFQMLKGRCR 2124
GSAADI+K A +NI HS ++ P L F ++G
Sbjct: 2456 GSAADIVKTATVNIQKQLETFHSAFKSHGHRESMLQHGQTGLLPKKKLKGMFCPMRGGF- 2514
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+LQ+HDEL+ EV + + +V+K ME A L V L VK+++G++WG LE F
Sbjct: 2515 FILQLHDELLYEVAEEDVVQVAQIVKKEMECAVKLSVKLKVKVRMGASWGQLEDF 2569
>gi|76364226|gb|AAR08421.2| DNA polymerase theta [Homo sapiens]
Length = 2590
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 323/801 (40%), Positives = 474/801 (59%), Gaps = 73/801 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 67 DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 126
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 127 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDI 186
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y T
Sbjct: 187 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI----TR 242
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S+S + SS ++ +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E +KV
Sbjct: 243 KSASCQADLASS----LSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKV 298
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DH+V LC E + + HSVL+FC S+K CE A +
Sbjct: 299 GNSIYDSSMKLVREFEPMLQVKG-DEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADII 357
Query: 800 SKFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPAGLDPVLEETLPSGV 846
++ N+H + ++ +D LRR P+GLD VL++T+P GV
Sbjct: 358 AREF----YNLHHQAEGLVKPSECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGV 413
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
A+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 414 AFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILT 473
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNGMTH 961
Y+QM GRAGR G+DT GES+LICK E K + LL S P+ SCL E M
Sbjct: 474 YKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTGSMIR 533
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHRK 1011
AILE++ GG+ T++D+H Y CT L S K + ++ Q+S++ WL +
Sbjct: 534 AILEIIVGGVASTSQDMHTYAACTFLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENE 593
Query: 1012 FLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH++YL
Sbjct: 594 FIQSTEASDGTEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYL 653
Query: 1067 STPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDST 1125
TP+ + DW ++ + +L + V VGV E +L R G K+ T
Sbjct: 654 VTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVART 706
Query: 1126 KGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMV 1185
+ H + + + KRF+ +L+L L+ E P+ E+ + + RG +
Sbjct: 707 ERQH------------------RQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQI 748
Query: 1186 QALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1245
Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR
Sbjct: 749 QSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRAR 808
Query: 1246 ALYKAGLRTPLAIAEASISEI 1266
LY +G T +A A+I E+
Sbjct: 809 VLYASGFHTVADLARANIVEV 829
Score = 245 bits (625), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 265/543 (48%), Gaps = 105/543 (19%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY LAG
Sbjct: 2063 LLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAG 2122
Query: 1785 MKFSLYTAADIANVLYGHLKLPIP--EGHNKGKQHP--------------------STDK 1822
FS ++ DIA VL+ LKLP P E N+G + ST K
Sbjct: 2123 HSFSFTSSDDIAEVLFLELKLP-PNREMKNQGSKKTLGSTRRGIDNGRKLRLGRQFSTSK 2181
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLA-------------KLLNCTLGSICSLARISMSTQKYT 1869
L+ L+ HP+ +I E R + K LN LG + RI +Q +T
Sbjct: 2182 DVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKCLNPFLG----MERIYPVSQSHT 2237
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN-------------------EDIYGG 1910
ATGR++ EPN+Q V E KM Y
Sbjct: 2238 ----------ATGRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGKYKK 2287
Query: 1911 NAEVD-HCK---------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
V+ C+ I+ R F+P IL AADYSQ+ELR++AH S D
Sbjct: 2288 GFSVNPRCQAQMEERAADRGMPFSISMRHAFVPFPGGSIL-AADYSQLELRILAHLSHDR 2346
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
LI +L+ DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+
Sbjct: 2347 RLIQVLNT-GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIK 2405
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
N+A I SFKS + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+
Sbjct: 2406 ENDAACYIDSFKSRYTGINQFMTETVKNCKRDGFVQTILGRRRYLPGIKDNNPYRKAHAE 2465
Query: 2075 RQAVNSICQGSAADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQMLKGR 2122
RQA+N+I QGSAADI+KIA +NI HS G+ + D + + + L+G
Sbjct: 2466 RQAINTIVQGSAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDRTGLSRKRKLQGM 2525
Query: 2123 -CRL-----LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
C + +LQ+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L
Sbjct: 2526 FCPIRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGEL 2585
Query: 2177 EPF 2179
+ F
Sbjct: 2586 KDF 2588
>gi|405950373|gb|EKC18366.1| DNA polymerase theta [Crassostrea gigas]
Length = 2674
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 335/852 (39%), Positives = 490/852 (57%), Gaps = 116/852 (13%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L +W LP + Y +GI+ ++ WQ ECL + GVL NLVY A TSAGK+ VAE
Sbjct: 141 DKLLLKNWGLPEPVMKQYSDKGITSMFEWQAECLCLPGVLDGGNLVYSAPTSAGKTMVAE 200
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ T K A+++LP+VS+ EK +L+ L + +G V + G+ V
Sbjct: 201 LLVLKRVLETKKKAIIILPFVSVAREKMFYLQQLYQEVGVSVSGFMGSYSPPGGLSQVDV 260
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGE-GT 678
AVCTIEK N L+NR++EE RL ++GI+VIDELH+V DQ+RGYLLEL+LTK+R+ +
Sbjct: 261 AVCTIEKGNGLINRLMEENRLDQLGIVVIDELHLVGDQHRGYLLELMLTKIRFLSQRMKK 320
Query: 679 SDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
D + E+S T G+QI+GMSAT+PN+ +A WL A LY T++RPVPL E +K
Sbjct: 321 PDPQNMESSST--------EGIQIIGMSATLPNLDLLARWLDATLYRTDYRPVPLTECVK 372
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCE----S 794
+G I+ ++ +R + + G D DH+V LC E +++GHSVLIFC ++ CE +
Sbjct: 373 LGADIFDSRLQKIREVDLSVTFKG-DTDHVVPLCLETLRDGHSVLIFCPTKNWCEKLAET 431
Query: 795 TARHVSKFLKKFSINVHSSD-------SEFIDITSA-----IDALRRCPAGLDPVLEETL 842
AR LKK +++ ++ S + ++ A ++ LRR P GLD L +T+
Sbjct: 432 IAREFYGILKKAPVDMQANQGSGGNPPSPCLPLSRASLQEVVEQLRRTPVGLDSTLGKTV 491
Query: 843 PSGVAYHHAG-----------------------------------LTVEEREVVETCYRK 867
P GVAYHHAG LT +ER+++E +R+
Sbjct: 492 PYGVAYHHAGKYQHKFIVRVKEDPGGARLYPEEDCPYVVAHHHTGLTFDERDILEGAFRQ 551
Query: 868 GLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESML 927
G V+VL ATSTL++GVNLPARRVI R P ID Y+QM GRAGR G+DT+GES+L
Sbjct: 552 GAVKVLIATSTLSSGVNLPARRVIIRTPLFHGKTIDFLTYKQMIGRAGRKGVDTQGESIL 611
Query: 928 ICKPEEVKKIMGLLNESCPPLHSCLSEDK-----NGMTHAILEVVAGGIVQTAEDIHRYV 982
ICKP E K + L+ + PP+ SCL +++ + M AILE+V G+ + D+ Y
Sbjct: 612 ICKPGERSKAVTLVQSALPPVSSCLIKNQGEQLSSSMKRAILEIVVSGVADSVTDVTAYA 671
Query: 983 RCTLLNSTKPFQDVVKSAQDSLRWLCHR--KFLEWNEDTKL-------------YSTTPL 1027
CT+L ++ + ++ D + + +FL+ NE L + T L
Sbjct: 672 SCTMLAAS------LDTSSDQTQGMISACIQFLQENEFVSLQRVQSSDGVYEDRFVPTQL 725
Query: 1028 GRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI---NVEVEPDWELYYER 1084
G A SSL P+E L V +L +AR+ FVL ++LH+VYL TPI ++ +W +Y
Sbjct: 726 GAAVLASSLSPDEGLSVFAELQKARQCFVLENELHIVYLVTPIYSLDLGAGMNWYKFYCL 785
Query: 1085 FLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNML 1144
+ +LS + V VGVSE +L R G RI +K T N +
Sbjct: 786 WDKLSPDKKRVAQLVGVSEAFLTRAIQG---RIPTK------------------TENQI- 823
Query: 1145 SDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCE 1204
++L + KRFY +LILS LVQE P+ EVC + +G +Q+LQ+ A FA MV+VFC
Sbjct: 824 ---RSLAIHKRFYTSLILSDLVQEVPLGEVCHRYGANKGQLQSLQQTAATFAGMVTVFCA 880
Query: 1205 RLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIS 1264
RLGWY+LE ++ +FQ+R++FG++ E+ +L + + G RAR LY G T A+A AS+S
Sbjct: 881 RLGWYNLELILGQFQHRLTFGIQRELCDLVRLTLLNGQRARVLYDGGFHTVAALANASVS 940
Query: 1265 EIVKALFESSSW 1276
++ K +SS +
Sbjct: 941 DVEKIFKKSSPF 952
Score = 242 bits (618), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 250/470 (53%), Gaps = 49/470 (10%)
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPI- 1807
M+ + + + E C + +N++ +L LE++AY G +FSL + D++ +L+ L+LP+
Sbjct: 2209 MQFYTLCFNDEECERQKNIMVARLGDLEEQAYRCVGHQFSLTSTEDLSQILFIELQLPVN 2268
Query: 1808 ----------------PEGHNKGKQHP--STDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
P H +G+Q ST K L+ LR HP ++ E R ++ L
Sbjct: 2269 GDPSSLGQPMRPNRRAPNSH-RGRQKSQFSTTKEVLEKLRPLHPFPGILLEWRRISGSLT 2327
Query: 1850 CTLGSICSLARISMSTQKYTLHGHW--LQTSTATGRLSMEEPNLQCV------------E 1895
+ +L + + + +H + +Q TATGR+S+ EPNLQ V E
Sbjct: 2328 KV---VFALQKEKVYCENLGMHRIFTDVQYFTATGRVSLSEPNLQNVPKDFLISVSAPVE 2384
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+ ++ + N+ ++ R FIP +LLAADYSQ+ELR++AH S+D
Sbjct: 2385 NFNQWDAAGHRNKNRNSGQTSFNVSMRHAFIPF-PGGVLLAADYSQLELRMIAHLSQDSK 2443
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
LI +L+ GDVF +I A+W S + V ++R Q K++ YG++YG+G L + L
Sbjct: 2444 LIKILNG-DGDVFKLITAQWKSISVEEVTPEQRQQAKQICYGMIYGIGAKALGDTLGVEE 2502
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
N+A I++FKS +PG+ +L V C + GYVE++ GR+R+L I ++ A+R
Sbjct: 2503 NDAAAFIQTFKSKYPGMRRYLKDTVDKCCKNGYVETISGRRRYLPSISNKKPYVRAHAER 2562
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGV--------YKPDSSLAANFQMLKGRCRLLL 2127
QAVN+ QGSAAD++K+AM I + YK D ++ RC L+L
Sbjct: 2563 QAVNTTVQGSAADLVKVAMNRIDDRLSAMFPLSKKTFSYKEDE--VQGIELSSDRCCLVL 2620
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
Q+HDEL+ EV + +A ++++ ME+A L V + VK++ G +W +++
Sbjct: 2621 QLHDELIYEVTERCLGQAAKVIKEEMETAMTLSVKMPVKVKSGLSWATMQ 2670
>gi|119599916|gb|EAW79510.1| polymerase (DNA directed), theta, isoform CRA_a [Homo sapiens]
Length = 2725
Score = 592 bits (1525), Expect = e-165, Method: Compositional matrix adjust.
Identities = 323/801 (40%), Positives = 474/801 (59%), Gaps = 73/801 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 202 DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 261
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 262 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDI 321
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y T
Sbjct: 322 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI----TR 377
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S+S + SS ++ +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E +KV
Sbjct: 378 KSASCQADLASS----LSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKV 433
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DH+V LC E + + HSVL+FC S+K CE A +
Sbjct: 434 GNSIYDSSMKLVREFEPMLQVKG-DEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADII 492
Query: 800 SKFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPAGLDPVLEETLPSGV 846
++ N+H + ++ +D LRR P+GLD VL++T+P GV
Sbjct: 493 AREF----YNLHHQAEGLVKPSECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGV 548
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
A+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 549 AFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILT 608
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNGMTH 961
Y+QM GRAGR G+DT GES+LICK E K + LL S P+ SCL E M
Sbjct: 609 YKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTGSMIR 668
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHRK 1011
AILE++ GG+ T++D+H Y CT L S K + ++ Q+S++ WL +
Sbjct: 669 AILEIIVGGVASTSQDMHTYAACTFLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENE 728
Query: 1012 FLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH++YL
Sbjct: 729 FIQSTEASDGTEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYL 788
Query: 1067 STPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDST 1125
TP+ + DW ++ + +L + V VGV E +L R G K+ T
Sbjct: 789 VTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVART 841
Query: 1126 KGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMV 1185
+ H + + + KRF+ +L+L L+ E P+ E+ + + RG +
Sbjct: 842 ERQH------------------RQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQI 883
Query: 1186 QALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1245
Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR
Sbjct: 884 QSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRAR 943
Query: 1246 ALYKAGLRTPLAIAEASISEI 1266
LY +G T +A A+I E+
Sbjct: 944 VLYASGFHTVADLARANIVEV 964
Score = 244 bits (624), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 264/542 (48%), Gaps = 103/542 (19%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY LAG
Sbjct: 2198 LLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAG 2257
Query: 1785 MKFSLYTAADIANVLYGHLKLPIP-EGHNKGKQHP--------------------STDKH 1823
FS ++ DIA VL+ LKLP E N+G + ST K
Sbjct: 2258 HSFSFTSSDDIAEVLFLELKLPPNREMKNQGSKKTLGSTRRGIDNGRKLRLGRQFSTSKD 2317
Query: 1824 CLDLLRHEHPIVPVIKEHRTLA-------------KLLNCTLGSICSLARISMSTQKYTL 1870
L+ L+ HP+ +I E R + K LN LG + RI +Q +T
Sbjct: 2318 VLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKCLNPFLG----MERIYPVSQSHT- 2372
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN-------------------EDIYGGN 1911
ATGR++ EPN+Q V E KM Y
Sbjct: 2373 ---------ATGRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGKYKKG 2423
Query: 1912 AEVD-HCK---------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
V+ C+ I+ R F+P IL AADYSQ+ELR++AH S D
Sbjct: 2424 FSVNPRCQAQMEERAADRGMPFSISMRHAFVPFPGGSIL-AADYSQLELRILAHLSHDRR 2482
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
LI +L+ DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+
Sbjct: 2483 LIQVLNT-GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKE 2541
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
N+A I SFKS + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+R
Sbjct: 2542 NDAACYIDSFKSRYTGINQFMTETVKNCKRDGFVQTILGRRRYLPGIKDNNPYRKAHAER 2601
Query: 2076 QAVNSICQGSAADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQMLKGR- 2122
QA+N+I QGSAADI+KIA +NI HS G+ + D + + + L+G
Sbjct: 2602 QAINTIVQGSAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDRTGLSRKRKLQGMF 2661
Query: 2123 CRL-----LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
C + +LQ+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L+
Sbjct: 2662 CPIRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELK 2721
Query: 2178 PF 2179
F
Sbjct: 2722 DF 2723
>gi|157786800|ref|NP_001099348.1| DNA polymerase theta [Rattus norvegicus]
gi|149060535|gb|EDM11249.1| polymerase (DNA directed), theta (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 2547
Score = 592 bits (1525), Expect = e-165, Method: Compositional matrix adjust.
Identities = 330/803 (41%), Positives = 473/803 (58%), Gaps = 71/803 (8%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 68 DQLLLANWGLPKAVLEKYHNFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 127
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ T K AL +LP+VS+ EK +L+ L + +G V Y G+ V
Sbjct: 128 LLILKRVLETRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPTGRFSSLDV 187
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G +V+DELHM+ D +RGYLLELLLTK+ + T
Sbjct: 188 AVCTIERANGLINRLIEENKMDLLGTVVVDELHMLGDSHRGYLLELLLTKVCFV----TR 243
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S+S + S+ A +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E IKV
Sbjct: 244 KSASCQADSASA----LACAVQIVGMSATLPNLQLVASWLNAELYHTDFRPVPLLESIKV 299
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DHIV LC E V++ HSVL+FC S+K CE A +
Sbjct: 300 GNSIYDSSMKLVREFQPLLQVKG-DEDHIVSLCYETVRDNHSVLVFCPSKKWCEKVADII 358
Query: 800 SKFLKKFSINVHSS------DSEFIDIT-------SAIDALRRCPAGLDPVLEETLPSGV 846
++ N+H SEF + ID L+R P+GLD VL+ T+P GV
Sbjct: 359 AREF----YNLHHQPEGLVKSSEFPPVILDQKSLLEVIDQLKRSPSGLDSVLKNTVPWGV 414
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
A+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 415 AFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPVFGGQPLDILT 474
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS---EDKNGMTHAI 963
Y+QM GRAGR G+DT GES+L+CK E K + LL S P+HSCL E + M AI
Sbjct: 475 YKQMVGRAGRKGVDTMGESILVCKNSEKSKGIALLQGSLEPVHSCLQSQGEVTSTMIRAI 534
Query: 964 LEVVAGGIVQTAEDIHRYVRCTLLNS---------TKPFQDVVKSAQDS-LRWLCHRKFL 1013
LE++ G+ T++D+ Y CT L + + DV + A D+ + WL +F+
Sbjct: 535 LEIIVSGVASTSQDMQTYAACTFLAADVKEGKQGIQRNRDDVQRGAVDACVTWLLENEFI 594
Query: 1014 EWNEDT-----KLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLST 1068
+ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH+VYL T
Sbjct: 595 QAAEPSDGTGGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVT 654
Query: 1069 PINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKG 1127
P+ + DW ++ + +L + V VGV E +L R G K+ T+
Sbjct: 655 PVFEDWTSIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVARTER 707
Query: 1128 LHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQA 1187
H + + + KRF+ +L+L L+ E P+ E+ + + RG +Q+
Sbjct: 708 QH------------------RQMAIHKRFFTSLVLLDLISEIPLKEINQKYGCNRGQIQS 749
Query: 1188 LQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARAL 1247
LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR L
Sbjct: 750 LQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLIRVSSLNAQRARFL 809
Query: 1248 YKAGLRTPLAIAEASISEIVKAL 1270
Y +G T +A A E+ AL
Sbjct: 810 YASGFLTVADLARADTVEVEAAL 832
Score = 248 bits (633), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 260/541 (48%), Gaps = 97/541 (17%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L +L E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 2019 LNSMLQKENLHDIFCKVEMPSQYCLALLELNGIGFSTAECETQKHIMQAKLDAIETQAYQ 2078
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGK----------------------QHPS 1819
LAG FS +A DIA VL+ LKLP P G K + + S
Sbjct: 2079 LAGHSFSFTSADDIAQVLFLELKLP-PNGEMKTQGGRKTLGSTRRGTESDRKLRLGRRFS 2137
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCT---------LGSICSLARISMSTQKYTL 1870
T K L+ L+ HP+ +I E R ++ + L + RI +Q +T
Sbjct: 2138 TSKDILNKLKDLHPLPGLILEWRRISNAITKVVFPLQREKHLNPFLRMERIYPVSQSHT- 2196
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM----------------------SNEDIY 1908
ATGR++ EPN+Q V E KM N+ +Y
Sbjct: 2197 ---------ATGRITFTEPNIQNVPRDFEIKMPTLVRESPPSQASGKGQLAMARQNQKVY 2247
Query: 1909 G---GNAEVDH--------CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
G G V ++ R F+P ++LAADYSQ+ELR++AH S+D LI
Sbjct: 2248 GLHPGQRTVLEKTSDRGVPFSVSMRHAFVPF-PGGLILAADYSQLELRILAHLSRDCRLI 2306
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
+L+ DVF IAA W D+VG R Q K++ YGI+YGMG +L EQ+ N+
Sbjct: 2307 QVLNS-GADVFRSIAAEWKMIEPDAVGDNLRQQAKQICYGIIYGMGAKSLGEQMGIKEND 2365
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
A I SFKS + G+ ++ V +C + G+VE++ GR+R+L IK N K+ A+RQA
Sbjct: 2366 AACYIDSFKSRYKGINHFMRDTVKNCRRDGFVETILGRRRYLPGIKDNNPYHKAHAERQA 2425
Query: 2078 VNSICQGSAADIIKIAMINIHSII--VGGVYK-----------------PDSSLAANFQM 2118
+N+ QGSAADI+K+A +NI + +K P + F
Sbjct: 2426 INTTVQGSAADIVKVATVNIQKQLETFHPTFKSHGHRESMLQSDRAGLLPKRKVKGMFCP 2485
Query: 2119 LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEP 2178
++G +LQ+HDEL+ EV + + +V+ ME A L V L VK+++G++WG L+
Sbjct: 2486 MRGGF-FILQLHDELLYEVAEEDVVQVAQIVKNEMECAIKLSVKLKVKVKIGASWGELKD 2544
Query: 2179 F 2179
F
Sbjct: 2545 F 2545
>gi|345796069|ref|XP_545125.3| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta [Canis lupus
familiaris]
Length = 2596
Score = 592 bits (1525), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/821 (39%), Positives = 484/821 (58%), Gaps = 78/821 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ +++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 72 DQLLLANWGLPVAVLEKYHSYGVKRMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 131
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+LML+R++ K AL +LP+VS+ EK +L+ L + +G +V Y G+ +
Sbjct: 132 LLMLKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEIGINVDGYMGSTSPTGHFSSLDI 191
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y + S
Sbjct: 192 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITHKSAS 251
Query: 680 DSSSGENSGTSSGKADP-AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+ A P ++ +QIVGMSAT+PN+ VA WL A LY TNFRPVPL E +K
Sbjct: 252 ---------CQADLASPLSNAVQIVGMSATLPNLEIVASWLNAELYHTNFRPVPLLESVK 302
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+GN+IY M +VR + G D DH+V LC E + + HSVLIFC S+K CE A
Sbjct: 303 IGNSIYDSSMKLVREFQPNLQVKG-DEDHVVSLCYETICDNHSVLIFCPSKKWCEKLADI 361
Query: 799 VS-KFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPAGLDPVLEETLPS 844
++ +F N+H + + + +D L+R P+GLD VL++T+P
Sbjct: 362 IACEFY-----NLHHQATGLVRSSELPPVVLEQKGLLEVMDQLKRSPSGLDSVLQKTIPW 416
Query: 845 GVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDG 904
GVA+HHAGLT EER+++E +R+G +RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 417 GVAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIRTPIFGGQPLDI 476
Query: 905 TRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKN-----GM 959
Y+QM GRAGR G+DT GES+L+CK E K + LL S P+ SCL K M
Sbjct: 477 LTYKQMVGRAGRKGVDTVGESILVCKNSEKSKGIALLQGSLKPVRSCLQRQKGEEVTASM 536
Query: 960 THAILEVVAGGIVQTAEDIHRYVRCTLLNS--------TKPFQDVVK--SAQDSLRWLCH 1009
AILE++ GG+ T++D+ Y CT L + ++ QD V+ + + + WL
Sbjct: 537 IRAILEIIVGGVASTSQDMQTYASCTFLAASMKEGKLGSQKNQDCVQLGAIEACVMWLLE 596
Query: 1010 RKFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
+F++ E + KLY T LG A SSL P ++L + DL RA +GFVL +DLH+V
Sbjct: 597 NEFIQITETGDGTEGKLYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIV 656
Query: 1065 YLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRD 1123
YL TP+ + DW ++ + +L + V VGV E +L R G K+
Sbjct: 657 YLVTPMFEDWATIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVA 709
Query: 1124 STKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARG 1183
T+ H + + + KRF+ +L+L L+ E P+ E+ + + +RG
Sbjct: 710 RTERQH------------------RQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCSRG 751
Query: 1184 MVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSR 1243
+Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + R
Sbjct: 752 QIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQR 811
Query: 1244 ARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRV 1284
AR LY +G T +A A+I+E V+A+ +++ A++ V
Sbjct: 812 ARFLYASGFLTVADLARANIAE-VEAVLKNAVPFKSARKAV 851
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 175/533 (32%), Positives = 258/533 (48%), Gaps = 82/533 (15%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 2065 LNSLLKKENLQDVFCKVEMPSQYCLALLELNGIGFSTTECESQKHIMQAKLDAIEIQAYQ 2124
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHP 1818
LAG FS ++ DIA VL+ LKLP P G K GKQ
Sbjct: 2125 LAGHSFSFTSSDDIAEVLFLELKLP-PNGEIKNQASKKTLGSTRRGNDSRRKLRLGKQF- 2182
Query: 1819 STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTS 1878
ST K L+ L+ HP+ +I E R + + + + R++ ++ Q+
Sbjct: 2183 STSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-VSQSH 2241
Query: 1879 TATGRLSMEEPNLQCVEHMVEFKMS---NED------------IYGGNAEVDHCKINA-- 1921
TATGR++ EPN+Q V E KM E +YG C N+
Sbjct: 2242 TATGRITFMEPNIQNVPRDFEIKMPILVGESPPSQALAKGLLPVYGRGRGKRSCGPNSGH 2301
Query: 1922 -------------------RDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSK 1962
R F+P ++LAADYSQ+ELR++AH S D LI +L+
Sbjct: 2302 QAQVEERASDQGMPFSVSMRHAFVPF-SGGLILAADYSQLELRILAHLSHDRRLIQVLNT 2360
Query: 1963 PHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKI 2022
DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A I
Sbjct: 2361 -GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYI 2419
Query: 2023 KSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSIC 2082
+SFKS + G+ ++ V +C + G+V+++ GR+R+L I N K+ A+RQA+N+
Sbjct: 2420 ESFKSRYTGINHFMRETVKNCKRNGFVQTILGRRRYLPGINDNNPYHKAHAERQAINTTV 2479
Query: 2083 QGSAADIIKIAMINI-------HSIIVGGVYKPDSSLAANFQMLKGRCR----------- 2124
QGSAADI+KIA +NI HS ++ + +L R +
Sbjct: 2480 QGSAADIVKIATVNIQKQLETLHSTFKSHGHREGMLQSERTGLLPKRKQQGVLYPVRGGF 2539
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
L+LQ+HDEL EV + + +V+ ME A L V L V++++G++WG L+
Sbjct: 2540 LILQLHDELFYEVAQEDVVQVAHIVKNEMERAIELSVKLKVRVKIGASWGDLK 2592
>gi|431919720|gb|ELK18077.1| DNA polymerase theta [Pteropus alecto]
Length = 2597
Score = 591 bits (1523), Expect = e-165, Method: Compositional matrix adjust.
Identities = 322/806 (39%), Positives = 473/806 (58%), Gaps = 75/806 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP+ + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 73 DKLLLANWGLPTPVLEKYHSFGVKKMFKWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 132
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 133 LLILKRVLEMRKKALFILPFVSVAKEKKFYLQSLFQEVGIKVDGYMGSTSPKGHFSSLDI 192
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN LVNR++EE +L +G++V+DELHM+ D +RGYLLELLLTK+ Y + S
Sbjct: 193 AVCTIERANGLVNRLIEENKLDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITQKSAS 252
Query: 680 DSSSGENSGTSSGKADP-AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+ A P ++ +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E +K
Sbjct: 253 ---------CQADLASPLSYAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVK 303
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+GN+IY M +VR + G D DH+V LC E +++ HSVL+FC S+K CE A
Sbjct: 304 IGNSIYDSSMKLVREFQPMLQVKG-DEDHVVSLCYETIRDNHSVLLFCPSKKWCEKLADT 362
Query: 799 VSKFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPAGLDPVLEETLPSG 845
++ N+H + + ID L+R P+GLD VL++T+P G
Sbjct: 363 IAHEF----YNLHHQAEGLVRSSEISPVMLERKSLLEVIDQLKRSPSGLDSVLQKTIPWG 418
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGT 905
VA+HHAGLT EER+++E +R+G +RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 419 VAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIRTPVFGGRTLDIL 478
Query: 906 RYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL-----SEDKNGMT 960
Y+QM GRAGR G+DT+GES+LICK E K + LL S P+ SCL E M
Sbjct: 479 TYKQMVGRAGRKGVDTEGESILICKNSEKSKGIALLQGSLKPVRSCLRRREGEEVTASMI 538
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHR 1010
AILE++ GG+ +T +D+ Y CT L S K + ++ QD ++ WL
Sbjct: 539 RAILEIIVGGVARTPQDMQIYASCTFLAASMKERKQGIQKNQDPVQHGAIEACVMWLLEN 598
Query: 1011 KFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY 1065
+F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH+VY
Sbjct: 599 EFIQTVEASDGTEGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVY 658
Query: 1066 LSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDS 1124
L TP+ + DW ++ + +L + V VGV E +L R G K+
Sbjct: 659 LVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCIKG-------KVVAR 711
Query: 1125 TKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGM 1184
T+ H + + + KRF+ +L+L L+ E P+ E+ + + RG
Sbjct: 712 TERQH------------------RQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCNRGQ 753
Query: 1185 VQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRA 1244
+Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RA
Sbjct: 754 IQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRA 813
Query: 1245 RALYKAGLRTPLAIAEASISEIVKAL 1270
R+LY +G+ T +A A+I E+ L
Sbjct: 814 RSLYASGILTVADLARANIDEVETVL 839
Score = 245 bits (626), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 264/531 (49%), Gaps = 81/531 (15%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY LAG
Sbjct: 2070 LLKKENLQDVFSKVEMPCQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAG 2129
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPEGH------------------NKGKQHP----STDK 1822
FS ++ DIA VL+ LKLP P G N+ KQ ST+K
Sbjct: 2130 HSFSFTSSDDIAEVLFWELKLP-PNGEIKNQNSKKTLGSTRRGNDNRCKQRLEKRFSTNK 2188
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATG 1882
L+ L+ HP+ +I E R + + + + R++ ++ Q+ TATG
Sbjct: 2189 DVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-ISQSHTATG 2247
Query: 1883 RLSMEEPNLQCVEHMVEFKM-----------------------SNEDIYGGN----AEVD 1915
R++ EPN+Q V E KM N+ G N A+++
Sbjct: 2248 RITFTEPNIQSVPRDFEIKMPTLVGESPPSQALGKGLHPMGRAGNKKGCGLNPRHQAQME 2307
Query: 1916 H--------CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDV 1967
++ R F+P ++LAADYSQ+ELR++AH S D LI +L+ DV
Sbjct: 2308 ERASDGGMPFSVSMRHAFVPF-SGGLILAADYSQLELRILAHLSYDQRLIQVLNT-GADV 2365
Query: 1968 FTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKS 2027
F IAA W SVG R Q K++ YGI+YGMG +L EQ+ N+A I SFKS
Sbjct: 2366 FRSIAAEWKMIEPKSVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKS 2425
Query: 2028 SFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAA 2087
+ G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQA+N+ QGSAA
Sbjct: 2426 RYTGINHFMKETVKNCKRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTTVQGSAA 2485
Query: 2088 DIIKIAMINI-------HSIIVGGVYK------------PDSSLAANFQMLKGRCRLLLQ 2128
DI+K+A +NI HS ++ P +L F ++G +LQ
Sbjct: 2486 DIVKLATVNIQKQLETFHSAFKSHGHRESMLQSDRAGLLPKKTLQGMFCPIRGGF-FILQ 2544
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+HDEL+ EV + + +V+ ME+A L V L VK+++G++WG L+ F
Sbjct: 2545 LHDELLYEVAEEDVVQVAQIVKNEMENAIKLSVKLKVKVKIGASWGELKDF 2595
>gi|47216119|emb|CAG11187.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2382
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 345/839 (41%), Positives = 490/839 (58%), Gaps = 97/839 (11%)
Query: 503 LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEIL 561
L LSSW LP + Y+K G+ ++ WQ +CL V VLQ NLVY A TSAGK+ V+E+L
Sbjct: 8 LLLSSWGLPKPVLERYRKHGVMHMFEWQAQCLTVGQVLQGANLVYSAPTSAGKTLVSELL 67
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAV 621
ML+R++ T + ALL+LP+VS+ EK +L+ + E G V Y GN VAV
Sbjct: 68 MLKRVLETKRKALLILPFVSVAKEKMHYLQSVFEEAGVRVEGYMGNVSAAGGFTSLDVAV 127
Query: 622 CTIEKANSLVNRMLEEGRLSEIG-----------------------IIVIDELHMVADQN 658
CTIEKANSL+NR++EE + +G ++V+DELHMV D
Sbjct: 128 CTIEKANSLINRLIEEENMGLLGKNTWFFLTSWCHCDFKSPIFAPGMVVVDELHMVGDSG 187
Query: 659 RGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADW 718
RGYLLELLLTK+ Y A + + S E G+QI+GMSAT+PN++ +A W
Sbjct: 188 RGYLLELLLTKICYIAQKQNTAGSLSE-------------GIQIIGMSATLPNLSLLASW 234
Query: 719 LQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQE 778
L A LY+T++RPVPL+E++KVG +Y K + VVR A N+ G D DHIV LC E V+E
Sbjct: 235 LCAELYQTDYRPVPLQEHLKVGCKVYDKDLSVVRQFTPALNVQGDD-DHIVSLCYETVRE 293
Query: 779 GHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEF----IDITSAIDA---LRRCP 831
G SVL+FC S+ CE A +++ + HS+++E +D +D L R P
Sbjct: 294 GCSVLLFCPSKNWCEKLADSIAREFYNLRNSEHSNEAELPPVSLDQQGLVDVVAQLGRTP 353
Query: 832 AGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVI 891
AGLD +L+ T+P GVA+HHAGLT +ER+V+E +R+GLVRVL ATSTL++GVNLPARRVI
Sbjct: 354 AGLDSILQRTVPWGVAFHHAGLTFDERDVLEGAFRQGLVRVLAATSTLSSGVNLPARRVI 413
Query: 892 FRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSC 951
R P +D Y+QM+GRAGR G+DT GES+L+CK E K + LL S P+ SC
Sbjct: 414 VRTPTFNGHLLDPLTYKQMSGRAGRKGVDTIGESLLVCKEAERHKGISLLKGSLQPISSC 473
Query: 952 LSEDK-----NGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPF-------QDVVKS 999
L + M AILE++ GG+ T +D+ Y C+LL ++ ++ K
Sbjct: 474 LVRREGEGVTTSMLRAILEIIVGGVASTPQDVRLYASCSLLAASLKLNMKKELDEETSKG 533
Query: 1000 AQDS-LRWLCHRKFLEWNE--DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFV 1056
A ++ + WL +F+ + + +LY T LG A SSL P ESL V DL RA +GFV
Sbjct: 534 AIEACVEWLMDNEFISIQKEGEEELYCPTQLGAATLSSSLSPPESLAVFADLQRAMKGFV 593
Query: 1057 LASDLHLVYLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPM 1115
L +DLH++YL TP+ E DW ++ + +LS+ + V VGV E +L R G +
Sbjct: 594 LENDLHILYLITPLYAEWTTIDWYQFFCLWEQLSSSMKRVAELVGVQEGFLARSVSGKII 653
Query: 1116 RISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVC 1175
+ K R + + V KRF+ L+L LV E P+ V
Sbjct: 654 AKTEKQR-------------------------RQMAVHKRFFTTLVLHDLVNEVPLGTVA 688
Query: 1176 ETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTT 1235
F RG +Q+LQ++A +A MV+VFC+RLGW+++E L++++Q R+SFG++ E+V+L
Sbjct: 689 SKFSCNRGQLQSLQQSASTYAGMVTVFCKRLGWHNMELLLSQYQTRLSFGIQRELVDLVR 748
Query: 1236 IPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL-----FESS------SWIAEAQRR 1283
+ +K +AR LY GLRT +A A+++++ KAL F+SS S + A+RR
Sbjct: 749 VSLLKALQARTLYAQGLRTVAELARATVADVEKALRNAVPFKSSKRAVDESEVEAAERR 807
Score = 243 bits (621), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 176/566 (31%), Positives = 265/566 (46%), Gaps = 94/566 (16%)
Query: 1703 AAHNGCCRRVAQTRALCSV-----LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVD 1757
++H C R A T ++ + L LL + +++ ++E+P LA +EL G+G
Sbjct: 1816 SSHTHCPRVRASTASVLTYAVMGRLTGLLREDGVLDHFRSVEMPSQVCLALLELNGVGFS 1875
Query: 1758 MEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQH 1817
C + ++++Q KL LE +AY LAG FSL + D+A VL+ L LP P G G +
Sbjct: 1876 AAECERQKHVMQAKLAALEGQAYRLAGHSFSLTSVDDVAQVLFLELHLP-PNGDVNGSKS 1934
Query: 1818 P--------------------STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTL----- 1852
ST K L+ LR HP+ +I E R + L +
Sbjct: 1935 KKTLGYGRRGGGGRVRLGKQFSTTKDVLEKLRPLHPLPGLILEWRRITNALTKVVFPLQR 1994
Query: 1853 ----GSICSLARISMSTQKYTLHGH-------------WLQTSTATGRLSMEEPNLQCVE 1895
S S+ RI Q +T G+ WL GR+S EPN+Q V
Sbjct: 1995 EKKHHSALSMDRIYPIAQTHTATGNPQTPEPCETCNMRWLSLVLLPGRVSFTEPNIQNVP 2054
Query: 1896 HMVEFKMSN---------------------------EDIYGGNAEVDHCKINARDFFIPS 1928
E +M+ G+ + ++ R F+P
Sbjct: 2055 KDFEIQMATVVCESPPSQDGRHLAARKGKKRRSAVPSGAAAGSEQGPAFSVSMRHAFVPF 2114
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
++LAADYSQ+ELR++AH SKD L+ +L+ DVF IAA W DSV R
Sbjct: 2115 S-GGMILAADYSQLELRVLAHLSKDQRLLQVLNG-GADVFRCIAAEWKSVDPDSVTDGLR 2172
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K++ YGI+YGMG +L EQ+ N+A I++FKS + G+ ++L V +C + GY
Sbjct: 2173 QQAKQICYGIIYGMGAKSLGEQMGVEENDAACYIETFKSRYRGINAFLKETVKNCGKNGY 2232
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIH---------- 2098
V++L GR+R+L I N K+ A+RQAVN+ QGSAADI+K+A +NI
Sbjct: 2233 VQTLMGRRRYLPGITNTNAHVKAHAERQAVNTTVQGSAADIVKLATVNIQKRLRQTYPAA 2292
Query: 2099 -------SIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQK 2151
+ ++G SS +LQ+HDEL+ E + + +V++
Sbjct: 2293 PLSHQHPAPVMGRFCGAGSSRRRAVTRHPRGGYFVLQLHDELIYETTDEDVIQVAQIVKR 2352
Query: 2152 CMESAALLLVPLLVKIQVGSTWGSLE 2177
ME+A L V + K++VG +WG LE
Sbjct: 2353 EMETAVKLYVKMRAKVKVGPSWGDLE 2378
>gi|30387615|ref|NP_084253.1| DNA polymerase theta isoform 1 [Mus musculus]
gi|29825886|gb|AAL77225.1| DNA polymerase theta [Mus musculus]
gi|148665535|gb|EDK97951.1| polymerase (DNA directed), theta, isoform CRA_a [Mus musculus]
gi|187953885|gb|AAI38361.1| Polymerase (DNA directed), theta [Mus musculus]
gi|187956948|gb|AAI57901.1| Polymerase (DNA directed), theta [Mus musculus]
Length = 2544
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 326/803 (40%), Positives = 474/803 (59%), Gaps = 71/803 (8%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 66 DQLLLANWGLPKAVLEKYHSFGVRKMFEWQAECLLLGHVLEGKNLVYSAPTSAGKTLVAE 125
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ T K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 126 LLILKRVLETRKKALFILPFVSVAKEKKCYLQSLFQEVGLKVDGYMGSTSPTGQFSSLDI 185
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN LVNR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y + S
Sbjct: 186 AVCTIERANGLVNRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYVTRK--S 243
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S E++ T S + +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E IK+
Sbjct: 244 ASHQAESASTLS------NAVQIVGMSATLPNLQLVASWLNAELYHTDFRPVPLLESIKI 297
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DHIV LC E +Q+ HSVLIFC S+K CE A +
Sbjct: 298 GNSIYDSSMKLVREFQPLLQVKG-DEDHIVSLCYETIQDNHSVLIFCPSKKWCEKVADII 356
Query: 800 SKFLKKFSINVHSS------DSEFIDIT-------SAIDALRRCPAGLDPVLEETLPSGV 846
++ N+H SEF + +D L+R P+GLD VL+ T+P GV
Sbjct: 357 AREF----YNLHHQPEGLVKSSEFPPVILDQKSLLEVMDQLKRSPSGLDSVLKNTVPWGV 412
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
A+HHAGLT EER+++E +R+G +RVL ATSTL++GVNLPARRVI R P +D
Sbjct: 413 AFHHAGLTFEERDIIEGAFRQGFIRVLAATSTLSSGVNLPARRVIIRTPIFSGQPLDILT 472
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL---SEDKNGMTHAI 963
Y+QM GRAGR G+DT GES+L+CK E K + LL S P+HSCL E M AI
Sbjct: 473 YKQMVGRAGRKGVDTMGESILVCKNSEKSKGIALLQGSLEPVHSCLQRQGEVTASMIRAI 532
Query: 964 LEVVAGGIVQTAEDIHRYVRCTLLNST--KPFQDVVKSAQDS--------LRWLCHRKFL 1013
LE++ GG+ T++D+ Y CT L + + Q + ++ D+ + WL +F+
Sbjct: 533 LEIIVGGVASTSQDMQTYAACTFLAAAIQEGKQGMQRNQDDAQLGAIDACVTWLLENEFI 592
Query: 1014 EWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLST 1068
+ E K+Y T LG A SSL P ++L + DL RA +GFVL +DLH+VYL T
Sbjct: 593 QVAEPGDGTGGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVT 652
Query: 1069 PINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKG 1127
P+ + + DW ++ + +L + V VGV E +L R G K+ T+
Sbjct: 653 PVFEDWISIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVARTER 705
Query: 1128 LHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQA 1187
H + + + KRF+ +L+L L+ E P+ ++ + + RG +Q+
Sbjct: 706 QH------------------RQMAIHKRFFTSLVLLDLISEIPLKDINQKYGCNRGQIQS 747
Query: 1188 LQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARAL 1247
LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR L
Sbjct: 748 LQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLIRVSLLNAQRARFL 807
Query: 1248 YKAGLRTPLAIAEASISEIVKAL 1270
Y +G T +A A +E+ AL
Sbjct: 808 YASGFLTVADLARADSAEVEVAL 830
Score = 248 bits (634), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 262/543 (48%), Gaps = 100/543 (18%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 2015 LNSLLQKENLHDIFCKVEMPSQYCLALLELNGIGFSTAECESQKHVMQAKLDAIETQAYQ 2074
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHP 1818
LAG FS +A DIA VL+ LKLP P G K G+Q
Sbjct: 2075 LAGHSFSFTSADDIAQVLFLELKLP-PNGEMKTQGSKKTLGSTRRGNESGRRMRLGRQF- 2132
Query: 1819 STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCT---------LGSICSLARISMSTQKYT 1869
ST K L+ L+ HP+ +I E R ++ + L + + RI +Q +T
Sbjct: 2133 STSKDILNKLKGLHPLPGLILEWRRISNAITKVVFPLQREKHLNPLLRMERIYPVSQSHT 2192
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM----------------------SNEDI 1907
ATGR++ EPN+Q V E KM ++ +
Sbjct: 2193 ----------ATGRITFTEPNIQNVPRDFEIKMPTLVRESPPSQAPKGRFPMAIGQDKKV 2242
Query: 1908 YG---GNAEVDHCK---------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
YG G+ K ++ R F+P ++LAADYSQ+ELR++AH S+D
Sbjct: 2243 YGLHPGHRTQMEEKASDRGVPFSVSMRHAFVPF-PGGLILAADYSQLELRILAHLSRDCR 2301
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
LI +L+ DVF IAA W D+VG R K++ YGI+YGMG +L EQ+
Sbjct: 2302 LIQVLNT-GADVFRSIAAEWKMIEPDAVGDDLRQHAKQICYGIIYGMGAKSLGEQMGIKE 2360
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
N+A I SFKS + G+ ++ V +C + G+VE++ GR+R+L IK N K+ A+R
Sbjct: 2361 NDAASYIDSFKSRYKGINHFMRDTVKNCRKNGFVETILGRRRYLPGIKDDNPYHKAHAER 2420
Query: 2076 QAVNSICQGSAADIIKIAMINIHSII--VGGVYK-----------------PDSSLAANF 2116
QA+N+ QGSAADI+KIA +NI + +K P L F
Sbjct: 2421 QAINTTVQGSAADIVKIATVNIQKQLETFRSTFKSHGHRESMLQNDRTGLLPKRKLKGMF 2480
Query: 2117 QMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
++G +LQ+HDEL+ EV + + +V+ ME A L V L VK+++G++WG L
Sbjct: 2481 CPMRGGF-FILQLHDELLYEVAEEDVVQVAQIVKNEMECAIKLSVKLKVKVKIGASWGEL 2539
Query: 2177 EPF 2179
+ F
Sbjct: 2540 KDF 2542
>gi|449275810|gb|EMC84578.1| Helicase POLQ-like protein, partial [Columba livia]
Length = 888
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 327/807 (40%), Positives = 479/807 (59%), Gaps = 72/807 (8%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ +++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 15 DKLLLANWGLPRAVLEKYHSLGVVQMFEWQAECLMLGQVLEGKNLVYSAPTSAGKTLVAE 74
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ T K ALL+LP+VS+ EK +L+ L + + V Y G+ V
Sbjct: 75 LLILKRVLETRKKALLILPFVSVAKEKKCYLQALFQEVDVRVEGYMGSMVPTGRFSALDV 134
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIEKAN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+RY T
Sbjct: 135 AVCTIEKANGLINRLIEENKMDSLGVVVVDELHMLGDSHRGYLLELLLTKVRYV----TE 190
Query: 680 DSSSGENSGTSSGKADPAHG-LQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+ + TS P+ G +QI+GMSAT+PN+ +A WL A LY T+FRPVPL+E++K
Sbjct: 191 KVAKRQAKMTS-----PSFGGIQIIGMSATLPNLGLLASWLDAELYCTDFRPVPLKEWVK 245
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+G+ IY M++VR L G D DH+V LC E V EGHSVL+FC S+ CE A
Sbjct: 246 IGSNIYDSSMNLVREFQPKLQLKG-DEDHVVSLCYETVCEGHSVLLFCPSKNWCEKLADI 304
Query: 799 VSK-----------FLKKFSINVHSSDSEFID---ITSAIDALRRCPAGLDPVLEETLPS 844
+++ F+ + S + +D I +D L+R +GLD VL+ TLP
Sbjct: 305 IAREFYSLQQSEECFISQGSSKNSALAPVVVDREGIDEVLDQLKRSISGLDSVLQRTLPW 364
Query: 845 GVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDG 904
GVA+HHAGLT +ER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P +D
Sbjct: 365 GVAFHHAGLTFDERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPMFCGKLLDM 424
Query: 905 TRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK-----NGM 959
Y+QMAGRAGR G+DT+GES+L+CKP E K LL S P+ SCL + + M
Sbjct: 425 LTYKQMAGRAGRKGVDTEGESILVCKPSERSKGTTLLQGSLKPVCSCLLRREGEGVASSM 484
Query: 960 THAILEVVAGGIVQTAEDIHRYVRCTLLNST--------KPFQDVVKSA--QDSLRWLCH 1009
AILE++ GG+ T +D+ Y CTLL S+ + QD ++ + + WL
Sbjct: 485 KRAILEIIVGGVANTPDDVQTYASCTLLASSLKASKCGNERTQDKAQTGPIEACVTWLLE 544
Query: 1010 RKFLEW-----NEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
+F++ + K+Y T LG A SSL P E++ + DL RA + FVL +DLH+V
Sbjct: 545 NEFIQVLDSGNDMKAKVYHPTHLGSATLSSSLSPTEAMEIFADLQRAMKSFVLENDLHIV 604
Query: 1065 YLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRD 1123
YL TP+ E DW ++ + +L A + V VG+ E +L R G K+
Sbjct: 605 YLVTPVYEEWTTIDWYQFFCLWEKLPASMRRVAELVGIEEGFLARSVKG-------KIIA 657
Query: 1124 STKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARG 1183
T+ H + + + KRF+ +L L L+ E P+ ++ + + +RG
Sbjct: 658 KTEKQH------------------RQMAIHKRFFTSLALLDLISEVPLKDMTKKYGCSRG 699
Query: 1184 MVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSR 1243
+Q+LQ++A +A MV+VFC RLGW+++E L+++FQ+R++FGV E+ +L + + R
Sbjct: 700 QLQSLQQSAATYAGMVTVFCNRLGWHNMELLLSQFQSRLTFGVHRELCDLVRVSLLNAQR 759
Query: 1244 ARALYKAGLRTPLAIAEASISEIVKAL 1270
AR LY AG T +A+AS ++ AL
Sbjct: 760 ARMLYNAGFVTVADLAKASPDDVATAL 786
>gi|32306445|gb|AAN39838.1| DNA polymerase Q [Mus musculus]
Length = 2587
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 325/801 (40%), Positives = 473/801 (59%), Gaps = 71/801 (8%)
Query: 503 LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEIL 561
L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE+L
Sbjct: 111 LLLANWGLPKAVLEKYHSFGVRKMFEWQAECLLLGHVLEGKNLVYSAPTSAGKTLVAELL 170
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAV 621
+L+R++ T K AL +LP+VS+ EK +L+ L + +G V Y G+ +AV
Sbjct: 171 ILKRVLETRKKALFILPFVSVAKEKKCYLQSLFQEVGLKVDGYMGSTSPTGQFSSLDIAV 230
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS 681
CTIE+AN LVNR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y + S S
Sbjct: 231 CTIERANGLVNRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYVTRK--SAS 288
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN 741
E++ T S + +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E IK+GN
Sbjct: 289 HQAESASTLS------NAVQIVGMSATLPNLQLVASWLNAELYHTDFRPVPLLESIKIGN 342
Query: 742 AIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSK 801
+IY M +VR + G D DHIV LC E +Q+ HSVLIFC S+K CE A +++
Sbjct: 343 SIYDSSMKLVREFQPLLQVKG-DEDHIVSLCYETIQDNHSVLIFCPSKKWCEKVADIIAR 401
Query: 802 FLKKFSINVHSS------DSEFIDIT-------SAIDALRRCPAGLDPVLEETLPSGVAY 848
N+H SEF + +D L+R P+GLD VL+ T+P GVA+
Sbjct: 402 EF----YNLHHQPEGLVKSSEFPPVILDQKSLLEVMDQLKRSPSGLDSVLKNTVPWGVAF 457
Query: 849 HHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYR 908
HHAGLT EER+++E +R+G +RVL ATSTL++GVNLPARRVI R P +D Y+
Sbjct: 458 HHAGLTFEERDIIEGAFRQGFIRVLAATSTLSSGVNLPARRVIIRTPIFSGQPLDILTYK 517
Query: 909 QMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS---EDKNGMTHAILE 965
QM GRAGR G+DT GES+L+CK E K + LL S P+HSCL E M AILE
Sbjct: 518 QMVGRAGRKGVDTMGESILVCKNSEKSKGIALLQGSLEPVHSCLQRQGEVTASMIRAILE 577
Query: 966 VVAGGIVQTAEDIHRYVRCTLLNST--KPFQDVVKSAQDS--------LRWLCHRKFLEW 1015
++ GG+ T++D+ Y CT L + + Q + ++ D+ + WL +F++
Sbjct: 578 IIVGGVASTSQDMQTYAACTFLAAAIQEGKQGMQRNQDDAQLGAIDACVTWLLENEFIQV 637
Query: 1016 NE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI 1070
E K+Y T LG A SSL P ++L + DL RA +GFVL +DLH+VYL TP+
Sbjct: 638 AEPGDGTGGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPV 697
Query: 1071 NVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLH 1129
+ + DW ++ + +L + V VGV E +L R G K+ T+ H
Sbjct: 698 FEDWISIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVARTERQH 750
Query: 1130 GKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQ 1189
+ + + KRF+ +L+L L+ E P+ ++ + + RG +Q+LQ
Sbjct: 751 ------------------RQMAIHKRFFTSLVLLDLISEIPLKDINQKYGCNRGQIQSLQ 792
Query: 1190 ENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYK 1249
++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR LY
Sbjct: 793 QSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLIRVSLLNAQRARFLYA 852
Query: 1250 AGLRTPLAIAEASISEIVKAL 1270
+G T +A A +E+ AL
Sbjct: 853 SGFLTVADLARADSAEVEVAL 873
Score = 248 bits (633), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 262/543 (48%), Gaps = 100/543 (18%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 2058 LNSLLQKENLHDIFCKVEMPSQYCLALLELNGIGFSTAECESQKHVMQAKLDAIETQAYQ 2117
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHP 1818
LAG FS +A DIA VL+ LKLP P G K G+Q
Sbjct: 2118 LAGHSFSFTSADDIAQVLFLELKLP-PNGEMKTQGSKKTLGSTRRGNESGRRMRLGRQF- 2175
Query: 1819 STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCT---------LGSICSLARISMSTQKYT 1869
ST K L+ L+ HP+ +I E R ++ + L + + RI +Q +T
Sbjct: 2176 STSKDILNKLKGLHPLPGLILEWRRISNAITKVVFPLQREKHLNPLLRMERIYPVSQSHT 2235
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM----------------------SNEDI 1907
ATGR++ EPN+Q V E KM ++ +
Sbjct: 2236 ----------ATGRITFTEPNIQNVPRDFEIKMPTLVRESPPSQAPKGRFPMAIGQDKKV 2285
Query: 1908 YG---GNAEVDHCK---------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
YG G+ K ++ R F+P ++LAADYSQ+ELR++AH S+D
Sbjct: 2286 YGLHPGHRTQMEEKASDRGVPFSVSMRHAFVPF-PGGLILAADYSQLELRILAHLSRDCR 2344
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
LI +L+ DVF IAA W D+VG R K++ YGI+YGMG +L EQ+
Sbjct: 2345 LIQVLNT-GADVFRSIAAEWKMIEPDAVGDDLRQHAKQICYGIIYGMGAKSLGEQMGIKE 2403
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
N+A I SFKS + G+ ++ V +C + G+VE++ GR+R+L IK N K+ A+R
Sbjct: 2404 NDAASYIDSFKSRYKGINHFMRDTVKNCRKNGFVETILGRRRYLPGIKDDNPYHKAHAER 2463
Query: 2076 QAVNSICQGSAADIIKIAMINIHSII--VGGVYK-----------------PDSSLAANF 2116
QA+N+ QGSAADI+KIA +NI + +K P L F
Sbjct: 2464 QAINTTVQGSAADIVKIATVNIQKQLETFRSTFKSHGHRESMLQNDRTGLLPKRKLKGMF 2523
Query: 2117 QMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
++G +LQ+HDEL+ EV + + +V+ ME A L V L VK+++G++WG L
Sbjct: 2524 CPMRGGF-FILQLHDELLYEVAEEDVVQVAQIVKNEMECAIKLSVKLKVKVKIGASWGEL 2582
Query: 2177 EPF 2179
+ F
Sbjct: 2583 KDF 2585
>gi|119879523|ref|XP_615375.3| PREDICTED: DNA polymerase theta [Bos taurus]
gi|297470916|ref|XP_002684835.1| PREDICTED: DNA polymerase theta [Bos taurus]
gi|296491393|tpg|DAA33456.1| TPA: polymerase (DNA directed), theta-like [Bos taurus]
Length = 2593
Score = 588 bits (1516), Expect = e-164, Method: Compositional matrix adjust.
Identities = 324/807 (40%), Positives = 479/807 (59%), Gaps = 77/807 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP+ + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 73 DKLLLANWGLPTAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 132
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 133 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPTRHFSSLDI 192
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y +
Sbjct: 193 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITQK--- 249
Query: 680 DSSSGENSGTSSGKADPA----HGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
++S +AD A + +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E
Sbjct: 250 ---------SASCQADLAIPLSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLE 300
Query: 736 YIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCEST 795
IK+GN+IY M +VR + G D DH+V LC E V++ HSVL+FC S+K CE
Sbjct: 301 SIKIGNSIYDSSMKLVREFQPMLQVKG-DEDHVVSLCYETVRDNHSVLLFCPSKKWCEKL 359
Query: 796 ARHVSKFLKKFSIN------VHSSD-----SEFIDITSAIDALRRCPAGLDPVLEETLPS 844
A +++ +S++ V SS+ E + +D L+R P+GLD VL++T+P
Sbjct: 360 ADIIAREF--YSLHHQAEGLVRSSELPPVMLEQKGLLEVMDQLKRSPSGLDSVLQKTVPW 417
Query: 845 GVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDG 904
GVA+HHAGLT EER+++E +R+G +RVL ATSTL++GVNLPARRVI R P +D
Sbjct: 418 GVAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIRTPIFSGRLLDI 477
Query: 905 TRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNGM 959
Y+QM GRAGR G+DT GES+L+CK E K + LL S P+HSCL E + M
Sbjct: 478 LTYKQMVGRAGRKGVDTVGESILVCKNSEKSKGITLLQGSLKPVHSCLQRHEGEEVTSSM 537
Query: 960 THAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCH 1009
AILE++ GG+ T++DI Y CT L S K + ++ +DS++ WL
Sbjct: 538 IRAILEIIVGGVASTSQDIQTYASCTFLAASMKEGKQGIQKNKDSVQLGAIEACVMWLLE 597
Query: 1010 RKFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
+F++ E + +Y T LG A SSL P ++L + DL RA +GFVL +DLH+V
Sbjct: 598 NEFIQITEASDGTEGNVYHPTHLGSATLSSSLSPIDTLDIFADLQRAMKGFVLENDLHIV 657
Query: 1065 YLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRD 1123
YL TP+ + DW ++ + +L A + V VGV E +L R G L
Sbjct: 658 YLVTPVFEDWTTIDWYRFFCLWEKLPASMKRVAELVGVEEGFLARCVKG-------NLVA 710
Query: 1124 STKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARG 1183
T+ H + + + KRF+ +L+L L+ E P+ E+ + + RG
Sbjct: 711 RTERQH------------------RQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCNRG 752
Query: 1184 MVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSR 1243
+Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + R
Sbjct: 753 QIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQR 812
Query: 1244 ARALYKAGLRTPLAIAEASISEIVKAL 1270
AR LY +G T +A A ++E+ L
Sbjct: 813 ARFLYASGFLTVSDLARADVAEVESVL 839
Score = 252 bits (643), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 219/731 (29%), Positives = 326/731 (44%), Gaps = 128/731 (17%)
Query: 1533 GLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEI 1592
GLAVCW YY +L K+ H LI S D ++ +K R + +
Sbjct: 1905 GLAVCWGGKDAYYFSLQKE--QKHSEISASLIPPSLDPSL--------TVKDRLRHLQSC 1954
Query: 1593 MEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDG 1652
K ++ + + IQ K + L+ + LE
Sbjct: 1955 FHKESDKERSVIIYDFIQSYK-----------ILLLSCGISLEQSYE------------- 1990
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAAN-RSGRWKNQMR---RAAHNGC 1708
D + W+L PD S P L V L E +G+ + H+G
Sbjct: 1991 -DPKVACWLLDPD---SKEPTLHSIVSHFLPHELPLLEEIETGQGIQSLGLNVSTTHSGR 2046
Query: 1709 CRRVAQTRAL---CSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
R ++ + + L LL E L + +E+P LA +EL GIG C +
Sbjct: 2047 YRASVESILIFNSMNQLNSLLKKENLQDVFYKVEMPSQYCLALLELNGIGFSTAECESQK 2106
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNK------------ 1813
+++Q KL +E +AY LAG FS ++ DIA VL+ LKLP P G K
Sbjct: 2107 HIMQAKLDAIEMQAYQLAGHSFSFTSSDDIAEVLFLELKLP-PNGEGKNQGIKKTLGSTR 2165
Query: 1814 -----------GKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
GKQ ST K L+ LR HP+ +I E R + + + + R++
Sbjct: 2166 RGNDNGRKLRLGKQF-STSKGVLNKLRALHPLPGLILEWRRITNAITKVVFPLQREKRLN 2224
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMS--------NEDI------Y 1908
++ Q+ TATGR++ EPN+Q V E KM ++ +
Sbjct: 2225 PFLGMERIYP-VSQSHTATGRITFIEPNIQNVPRDFEIKMPAVVEESPPSQALGKGLLPM 2283
Query: 1909 GGNAEVDHCKINA---------------------RDFFIPSQENWILLAADYSQIELRLM 1947
G C +NA R F+P ++LAADYSQ+ELR++
Sbjct: 2284 GRGGRKKDCAMNAGRQTKVEERASDRGMPFSVSMRHAFVPFT-GGLILAADYSQLELRIL 2342
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D LI +L+ DVF IAA W +SVG R Q K++ YGI+YGMG +L
Sbjct: 2343 AHLSHDRRLIQVLNT-GADVFRSIAAEWKMIEPESVGDNLRQQAKQICYGIIYGMGAKSL 2401
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
EQ+ N+A I SFKS + G++ ++ V +C + G+V+++ GR+R+L IK N
Sbjct: 2402 GEQMGIKENDAACYIDSFKSRYTGISHFMRETVKNCKRDGFVQTILGRRRYLPGIKDNNP 2461
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINI-------HSIIVGGVYK------------P 2108
K+ A+RQA+N+ QGSAADI+KIA +NI HS ++ P
Sbjct: 2462 YHKAHAERQAINTRVQGSAADIVKIATVNIQKQLETFHSTFKSHGHREGLLQSERTGLLP 2521
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
L F ++G +LQ+HDEL+ EV + + +V+ MESA L V L VK++
Sbjct: 2522 KKKLQGMFCPIRGGF-FILQLHDELLYEVAEEDVVQVAQIVKNEMESAIKLSVKLRVKVR 2580
Query: 2169 VGSTWGSLEPF 2179
+G++WG L+ F
Sbjct: 2581 IGASWGELKDF 2591
>gi|308522710|ref|NP_001184156.1| polymerase (DNA directed), theta [Xenopus (Silurana) tropicalis]
Length = 2671
Score = 588 bits (1516), Expect = e-164, Method: Compositional matrix adjust.
Identities = 330/807 (40%), Positives = 473/807 (58%), Gaps = 71/807 (8%)
Query: 499 LKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFV 557
L D L L+SW LP + Y G+S+++ WQ ECL + VL+ +NLVY A TSAGK+ V
Sbjct: 186 LADKLMLASWGLPKTVLEKYGSLGVSQMFEWQAECLMLGQVLEGKNLVYSAPTSAGKTLV 245
Query: 558 AEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQ--GGGSLPK 615
AE+L+L+R++ T + AL +LP+VS+ EK +L+ L + +G V Y G+ GG
Sbjct: 246 AELLILKRVLETRRKALFILPFVSVAKEKTFYLQNLFQEVGVKVDGYMGSSSPAGGFCSL 305
Query: 616 DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAG 675
D VAVCTIEKAN LVNR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+RY
Sbjct: 306 D--VAVCTIEKANGLVNRLIEENKIDLLGMMVVDELHMLGDSHRGYLLELLLTKVRYVTQ 363
Query: 676 EGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
+G G + A PA+ +QIVGMSAT+PN+ +A WL A LY T+FRPVPL E
Sbjct: 364 KGAV--------GRKAEGAGPANDVQIVGMSATLPNLGLLAAWLDAELYHTDFRPVPLLE 415
Query: 736 YIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCEST 795
+K+G +Y M VR + G D DHIV L E V+ GHS+LIFC S+ CE
Sbjct: 416 RVKIGRTVYDSNMVAVREFEPLLPVKGDD-DHIVSLSYETVRGGHSILIFCPSKNWCEKL 474
Query: 796 ARHVSK-FLKKFSINVHSSDSEFID------------ITSAIDALRRCPAGLDPVLEETL 842
A +++ F F D+ D I +D L+R PAGLD VL T+
Sbjct: 475 ADTIAREFYNLFHRAQQRGDAGGSDSFVPPVALDRDGIRDVMDQLKRSPAGLDAVLGRTV 534
Query: 843 PSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFI 902
P GVA+HHAGLT +ER++VE +R+G VRVL ATSTL++GVNLPARRVI R P +
Sbjct: 535 PWGVAFHHAGLTFDERDIVEGAFRQGFVRVLAATSTLSSGVNLPARRVIIRSPLFNGRLL 594
Query: 903 DGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNG---- 958
D Y+QMAGRAGR G+DT+GES+L+CK E K + LL S P+ SCL +
Sbjct: 595 DILTYKQMAGRAGRKGVDTEGESILVCKNPERAKGISLLQGSLKPVQSCLLRKEGAGVTG 654
Query: 959 -MTHAILEVVAGGIVQTAEDIHRYVRCTLLNST-------KPFQDVVKSAQDSLRWLCHR 1010
M AILE++ GG+ T ED+ Y CTLL ++ + + + + + WL
Sbjct: 655 SMIRAILEIIVGGVADTPEDVRIYASCTLLAASMKQGGGDQEEEHGGGAIEACVDWLLRN 714
Query: 1011 KFLEWNEDTK------LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
+F++ E+ + +Y T LG A SSL P E+L + DL RA +GFVL +DLH++
Sbjct: 715 EFIQILEEDRGGTKAEVYRPTKLGAATLSSSLSPSEALGIFADLQRAMKGFVLENDLHIL 774
Query: 1065 YLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRD 1123
YL TP+ E DW ++ + +L + V VG+ E +L R +G
Sbjct: 775 YLVTPVYEEWTTIDWYQFFCLWEKLPTSMKRVAELVGIEEGFLARSVNGK---------- 824
Query: 1124 STKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARG 1183
I + N Q + + +RF+ +L+L L+ E + E+ + + +RG
Sbjct: 825 --------------IVAKNDRQHRQ-IAIHRRFFTSLVLLDLISEVSLKELTKKYGCSRG 869
Query: 1184 MVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSR 1243
+Q+LQ++A +A MV+VF RLGW+++E L+++FQ+R++FGV+ E+ +L + + R
Sbjct: 870 QLQSLQQSAATYAGMVTVFSNRLGWHNMELLLSQFQSRLTFGVQRELCDLVRVDLLNAQR 929
Query: 1244 ARALYKAGLRTPLAIAEASISEIVKAL 1270
ARALY AGL T +A A + ++ AL
Sbjct: 930 ARALYNAGLVTVAELARAHVIDVETAL 956
Score = 241 bits (614), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 181/553 (32%), Positives = 262/553 (47%), Gaps = 120/553 (21%)
Query: 1720 SVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKA 1779
+ L LL E+L +A +E+P LA +EL G+G E C +++++ KL +E A
Sbjct: 2144 NALGALLEKEKLQDAFHRVEMPTQYCLALLELNGMGFSTEECETQKHIMEAKLNEIEAVA 2203
Query: 1780 YTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQ 1816
Y LAG FSL + D+A VL+ LKLP P G K GKQ
Sbjct: 2204 YQLAGRSFSLTSHDDLAQVLFLELKLP-PNGDPKAQGNKKTLGYTRRAAASGARVRLGKQ 2262
Query: 1817 HPSTDKHCLDLLRHEHPIVPVIKEHRTLA-------------KLLNCTLGSICSLARISM 1863
ST K L+ L+ HP+ +I E + + KLLN LG + RI
Sbjct: 2263 F-STAKDVLEKLKALHPLPGLILEWKRITNALTKVVFPLQREKLLNPNLG----MERI-- 2315
Query: 1864 STQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMS-------------------- 1903
Y + QT TATGR+S EPN+Q V E +M
Sbjct: 2316 ----YPIS----QTHTATGRVSFTEPNIQNVPKDFEIEMPRLVGESPPSQAPGPSAYPYR 2367
Query: 1904 ------NEDIYGGNAEVDHCK--------INARDFFIPSQENWILLAADYSQIELRLMAH 1949
+ G V+ ++ R F+P ++LAA YSQ+ELR++AH
Sbjct: 2368 NRGKKPQVNTPGPKVPVEQIPAERGVSFFVSMRHAFVPF-PGGLILAAAYSQLELRILAH 2426
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
S+D LI +L+ DVF IAA W ++V R Q K++ YGI+YGMG +L E
Sbjct: 2427 LSRDRRLIQVLNS-GSDVFKSIAAEWKMIDPEAVTDTVRQQAKQICYGIIYGMGAKSLGE 2485
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
Q+ ++A I +FKS + G+ +L V SC + G+V+++ GR+R+L IK N
Sbjct: 2486 QMGIEESDAACYIDTFKSRYTGIQKFLKETVRSCTRDGFVQTILGRRRYLPAIKDSNPYA 2545
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINI----------------HSIIVGGV-------Y 2106
KS A+RQAVN+ QGSAADI+K A +NI H + GG +
Sbjct: 2546 KSHAERQAVNTTVQGSAADIVKTATVNIQKRLEETFPSVPKSHEHPVQAGGTGRAERLRH 2605
Query: 2107 KPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVK 2166
+P + A F +LQ+HDEL+ E + +++K ME+A L V L VK
Sbjct: 2606 RPPPTRGAFF---------ILQLHDELLYEAAQEDAIQVAQIIKKEMENAMKLSVKLRVK 2656
Query: 2167 IQVGSTWGSLEPF 2179
+++G +WG L+ F
Sbjct: 2657 VKMGPSWGDLQDF 2669
>gi|338716239|ref|XP_001502374.3| PREDICTED: DNA polymerase theta [Equus caballus]
Length = 2598
Score = 588 bits (1515), Expect = e-164, Method: Compositional matrix adjust.
Identities = 323/805 (40%), Positives = 472/805 (58%), Gaps = 73/805 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP+ + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 73 DKLLLANWGLPTAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 132
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 133 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPTGPFSSLDI 192
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN LVNR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y +
Sbjct: 193 AVCTIERANGLVNRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICY-----IT 247
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S+ + SS ++ +QIVGMSAT+PN+ VA WL A LY TNFRPVPL E +K+
Sbjct: 248 QKSASRQAHLSSPLSN---AVQIVGMSATLPNLELVASWLNAELYHTNFRPVPLLESVKI 304
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DHIV LC E V++ HSVL+FC S+K CE A +
Sbjct: 305 GNSIYDSSMKLVREFQPTLQVKG-DEDHIVSLCYETVRDNHSVLLFCPSKKWCEKLADTI 363
Query: 800 SKFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPAGLDPVLEETLPSGV 846
++ N+H + + +D LRR P+GLD VL++T+P GV
Sbjct: 364 AREF----YNLHHQAEGLVRSSELPPVILEQKGLLEVMDQLRRSPSGLDTVLQKTVPWGV 419
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
A+HHAGLT EER+++E +R+ +RVL ATSTL++GVNLPARRVI R P +D
Sbjct: 420 AFHHAGLTFEERDIIEGAFRQSQIRVLAATSTLSSGVNLPARRVIIRTPIFSGRPLDILT 479
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL-----SEDKNGMTH 961
Y+QM GRAGR G+DT GES+L+CK E + + LL S P+ SCL E M
Sbjct: 480 YKQMVGRAGRKGVDTVGESILVCKNSEKSEGIALLQGSLKPVCSCLRRREGEEVTASMIR 539
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHRK 1011
AILEV+ GG+ T++D+ Y CT L S K + ++ QDSL+ WL +
Sbjct: 540 AILEVIVGGVASTSQDMQTYASCTFLAASMKDGKQGIQKNQDSLQLGAIEACVMWLLENE 599
Query: 1012 FLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH+VYL
Sbjct: 600 FIQITEASDRTEGKVYHPTHLGSATLSSSLAPTDTLDIFADLQRAMKGFVLENDLHIVYL 659
Query: 1067 STPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDST 1125
TP+ + DW ++ + +L + V VGV E +L R G K+ T
Sbjct: 660 VTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVART 712
Query: 1126 KGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMV 1185
+ H + + + KRF+ +L+L L+ E P+ E+ + + RG +
Sbjct: 713 ERQH------------------RQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCNRGQI 754
Query: 1186 QALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1245
Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR
Sbjct: 755 QSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLIRVSLLNAQRAR 814
Query: 1246 ALYKAGLRTPLAIAEASISEIVKAL 1270
LY +G T +A A+I+E+ L
Sbjct: 815 FLYASGFLTVADLARANIAEVETVL 839
Score = 255 bits (652), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 261/916 (28%), Positives = 392/916 (42%), Gaps = 216/916 (23%)
Query: 1417 PPVP-------FVGPGTGGVEFNVNASEIKIPDTTLSVQLGKNAIGTITS---NRDLDLE 1466
PP P PG G S +K+ T+ +QLG++ + S N DL E
Sbjct: 1744 PPTPIPTSASKLTFPGILGT------SSVKLQKTSSVLQLGESYSFDLPSDIKNHDLSPE 1797
Query: 1467 VQD-----RPNRDPCL---VNKD------RACNKGPINAINASGG---FDCFLDRWEATH 1509
++ P RD + +++D +CN + I+ + F+ F+ W+
Sbjct: 1798 SRNGFKDNSPTRDTGVSLRLSQDGSQLTPASCNSESLAIIDVASDQTLFETFIKEWQCKK 1857
Query: 1510 EFYFDIHYDKHSEANS------GVLFE------------------------IHGLAVCWE 1539
F + +K S S G F+ + GLAVCW
Sbjct: 1858 RFSISLACEKISNLTSSKSTTIGCRFKQVSSPQDPPIREDGFPVKGCDDILVVGLAVCWG 1917
Query: 1540 NSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVR 1599
YY +L K+ H L+ S D LT + ++ ++ +++ E ++R V
Sbjct: 1918 GRDAYYFSLQKE--QKHSEISASLVPPSLDPR-LTMKDRMWHLRSCFQK--ESDKERSVI 1972
Query: 1600 KFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVS 1659
+ + IQ + L L+ + LE D +
Sbjct: 1973 VYDF---------------IQSYKIL-LLSCGISLEQSYE--------------DPKVAC 2002
Query: 1660 WILWPDDERSSNPNLEKEVKKRLSSEAAAAAN-RSGRWKNQMR---RAAHNGCCRRVAQT 1715
W+L PD S P L V L E +G+ + H+G R ++
Sbjct: 2003 WLLDPD---SKEPTLHSIVTSFLPHELPLLEGIETGQGIQSLGLNVDTEHSGRYRASVES 2059
Query: 1716 RAL---CSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
+ + L LL E L + +E+P LA +EL GIG C ++++Q KL
Sbjct: 2060 ILIFNSMNQLNSLLKKENLQDIFCKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKL 2119
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNK------------------- 1813
+E +AY LAG FS ++ DIA VL+ LKLP P G K
Sbjct: 2120 DAIETQAYQLAGHSFSFTSSDDIAEVLFLELKLP-PNGEMKNQGGKKTLGSTRRGNDNGR 2178
Query: 1814 ----GKQHPSTDKHCLDLLRHEHPIVPVIKEHRTL-------------AKLLNCTLGSIC 1856
GKQ ST K L+ L+ HP+ +I E R + AK LN LG
Sbjct: 2179 KLRLGKQF-STSKDILNKLKALHPLPGLILEWRRITNAITKVVFPLQRAKRLNPFLG--- 2234
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM-------------- 1902
+ RI +Q +T ATGR++ EPN+Q V E KM
Sbjct: 2235 -MERIYPVSQSHT----------ATGRITFTEPNIQNVPRDFEIKMPTLVGESPPSQALG 2283
Query: 1903 --------SNEDIYGGN----AEVDH--------CKINARDFFIPSQENWILLAADYSQI 1942
NE +G N A+ + ++ R F+P ++LAADYSQ+
Sbjct: 2284 KGLLPMGRGNEKSHGLNLGHQAQTEERASDRGMPFSVSMRHAFVPF-PGGLILAADYSQL 2342
Query: 1943 ELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGM 2002
ELR++AH S+D LI +L+ DVF IAA W +SVG R Q K++ YGILYGM
Sbjct: 2343 ELRILAHLSQDRRLIQVLNT-GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGILYGM 2401
Query: 2003 GPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKI 2062
G +L EQ+ N+A I SFKS + G+ ++ V +C + G+V+++ GR+R+L I
Sbjct: 2402 GAKSLGEQMGIKENDAACYIDSFKSKYTGINHFMRETVKNCKRDGFVQTILGRRRYLPGI 2461
Query: 2063 KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI-------HSIIVGGVYK-------- 2107
K N K+ A+RQA+N+ QGSAADI+KIA +NI HS ++
Sbjct: 2462 KDNNPYHKAHAERQAINTTVQGSAADIVKIATVNIQKQLETFHSSFKSHGHREGMLQSDR 2521
Query: 2108 ----PDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPL 2163
P L F ++G +LQ+HDEL+ EV + + +V+ MESA L V L
Sbjct: 2522 TGLLPKRKLQGMFSPIRGGF-FILQLHDELLYEVAEEDVVQVAQIVKNEMESAIKLSVKL 2580
Query: 2164 LVKIQVGSTWGSLEPF 2179
VK+++G++WG L+ F
Sbjct: 2581 KVKVKIGASWGELKDF 2596
>gi|426217534|ref|XP_004003008.1| PREDICTED: DNA polymerase theta [Ovis aries]
Length = 2594
Score = 587 bits (1514), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/808 (39%), Positives = 477/808 (59%), Gaps = 79/808 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP+ + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 73 DKLLLANWGLPTAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 132
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 133 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPTRHFSSLDI 192
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y +
Sbjct: 193 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITQK--- 249
Query: 680 DSSSGENSGTSSGKADPA----HGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
++S +AD A + +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E
Sbjct: 250 ---------SASCQADLAIPLSNAIQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLE 300
Query: 736 YIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCEST 795
IK+GN+IY M +VR + G D DH+V LC E +++ HSVL+FC S+K CE
Sbjct: 301 SIKIGNSIYDSSMKLVREFQPTLQVKG-DEDHVVSLCYETIRDNHSVLLFCPSKKWCEKL 359
Query: 796 ARHVSKFLKKFSINVHSSD-----SEFIDIT-------SAIDALRRCPAGLDPVLEETLP 843
A ++ ++F H ++ SEF + +D L+R P+GLD VL++T+P
Sbjct: 360 ADIIA---REFYSLHHQAEGLVRSSEFPPVMLEQKGLLEVMDQLKRSPSGLDSVLQKTVP 416
Query: 844 SGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFID 903
GVA+HHAGLT EER+++E +R+G +RVL ATSTL++GVNLPARRVI R P +D
Sbjct: 417 WGVAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIRTPIFSGRLLD 476
Query: 904 GTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNG 958
Y+QM GRAGR G+DT GES+L+CK E + + LL S P+ SCL E +
Sbjct: 477 ILTYKQMVGRAGRKGVDTVGESILVCKNSEKSQGITLLQGSLKPVRSCLQRQEGEEVTSS 536
Query: 959 MTHAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLC 1008
M AILE++ GG+ T++DI Y CT L S K + ++ +DS++ WL
Sbjct: 537 MIRAILEIIVGGVASTSQDIQTYASCTFLAASMKEGKQGIQKNKDSVQLGAIEACVMWLL 596
Query: 1009 HRKFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHL 1063
+F++ E + +Y T LG A SSL P ++L + DL RA +GFVL +DLH+
Sbjct: 597 ENEFIQMTEASDGTEGNVYHPTHLGSATLSSSLSPVDTLDIFADLQRAMKGFVLENDLHI 656
Query: 1064 VYLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLR 1122
VYL TP+ + DW ++ + +L A + V VGV E +L R G L
Sbjct: 657 VYLVTPVFEDWTTIDWYRFFCLWEKLPASMKRVAELVGVEEGFLARCVKG-------NLV 709
Query: 1123 DSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVAR 1182
T+ H + + + KRF+ +L+L L+ E P+ E+ + + R
Sbjct: 710 ARTERQH------------------RQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCNR 751
Query: 1183 GMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGS 1242
G +Q+LQ++A +A MV+VF RLGW+++E L+++FQ R++FG++ E+ +L + +
Sbjct: 752 GQIQSLQQSAAVYAGMVTVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQ 811
Query: 1243 RARALYKAGLRTPLAIAEASISEIVKAL 1270
RAR LY +G T +A A ++E+ L
Sbjct: 812 RARFLYASGFLTVADLARADVAEVESVL 839
Score = 246 bits (628), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 244/897 (27%), Positives = 386/897 (43%), Gaps = 179/897 (19%)
Query: 1417 PPVPFVGPGTGGVEF-NVNASEIKIPDTTLSVQLGKNA-IGTITSNRDLDLEVQDRPN-- 1472
PP P P + F ++ + +K+ + +LG+++ G+ ++N++ DL + R
Sbjct: 1741 PPTPI--PSDSKLAFPDILGTSVKLKKISNGFKLGESSSFGSPSNNKNHDLHPESRNGFK 1798
Query: 1473 -----RD----PCLVNKDR-----ACNKGPINAINASGG---FDCFLDRWEATHEFYFDI 1515
RD P L+ +C+ + I+ + F F+ W++ F +
Sbjct: 1799 DNSSIRDTSFSPQLLQNGSQLTLASCSPESLAIIDVASDQTLFQTFMKEWQSKTRFSISL 1858
Query: 1516 HYDK------HSEANSGVLFE------------------------IHGLAVCWENSPVYY 1545
+K A G +F+ + GLAVCW YY
Sbjct: 1859 ACEKIRNLTSSKSATIGGMFKQVSFPQEASIRDDGFPVKDCDDILVVGLAVCWGGKDAYY 1918
Query: 1546 VNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNM 1605
+L K+ H LI S D ++ +K R + +K ++ + +
Sbjct: 1919 FSLQKE--QKHSEISASLIPPSLDPSL--------TVKDRLWHLQSCFQKESDKERSVII 1968
Query: 1606 KVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPD 1665
IQ K + L+ + LE D + W+L PD
Sbjct: 1969 YDFIQSYK-----------ILLLSCGISLEQSYE--------------DPKVACWLLDPD 2003
Query: 1666 DERSSNPNLEKEVKKRLSSEAAAAAN-RSGRWKNQMR---RAAHNGCCRRVAQTRAL--- 1718
S P L V + L E +G+ + H+G R ++ +
Sbjct: 2004 ---SKEPTLHSIVSRFLPHELPLLEEIETGQGIQSLGLNVSTEHSGRYRASVESILIFNS 2060
Query: 1719 CSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKK 1778
+ L LL E L + +E+P LA +EL GIG C ++++Q KL +E +
Sbjct: 2061 MNQLNSLLKKENLQDVFCKVEMPSQYCLALLELNGIGFSTAECDSQKHIMQAKLDAIEMQ 2120
Query: 1779 AYTLAGMKFSLYTAADIANVLYGHLKLPIP--EGHNKG--------------------KQ 1816
AY LAG FS ++ DIA VL+ LKLP P EG N+G +
Sbjct: 2121 AYQLAGHSFSFTSSDDIAEVLFLELKLP-PNGEGKNQGIKKTLGSTRRGNDNGRKLRLAK 2179
Query: 1817 HPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQ 1876
ST K L+ LR HP+ +I E R + + + + R++ ++ Q
Sbjct: 2180 QFSTSKDVLNKLRALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-VSQ 2238
Query: 1877 TSTATGRLSMEEPNLQCVEHMVEFKMS--------NEDIYGG---------------NAE 1913
+ TATGR++ EPN+Q V E KM ++ + G N E
Sbjct: 2239 SHTATGRITFIEPNIQNVPRDFEIKMPTAVEESPPSQALGKGLLPMGRGGKKKGCGMNTE 2298
Query: 1914 VDH------------CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLS 1961
++ R F+P ++LAADYSQ+ELR++AH S D LI +L+
Sbjct: 2299 RQTKMEERASDRGMPFSVSMRHAFVPFT-GGLILAADYSQLELRILAHLSHDHRLIQVLN 2357
Query: 1962 KPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEK 2021
DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A
Sbjct: 2358 T-GTDVFRSIAAEWKMIEPESVGDNLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACY 2416
Query: 2022 IKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSI 2081
I SFKS + G++ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQA+N+
Sbjct: 2417 IDSFKSRYTGISHFMRETVKNCKRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTR 2476
Query: 2082 CQGSAADIIKIAMINI-------HSIIVGGVYK------------PDSSLAANFQMLKGR 2122
QGSAADI+KIA +NI HS ++ P L F ++G
Sbjct: 2477 VQGSAADIVKIATVNIQKQLETFHSTFKSHGHRESLLQSDRTGWLPKKKLQGMFCPIRGG 2536
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+LQ+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L+ F
Sbjct: 2537 F-FILQLHDELLYEVAEEDVVQVAQIVKNEMESAIKLSVKLRVKVKIGASWGELKDF 2592
>gi|327282241|ref|XP_003225852.1| PREDICTED: DNA polymerase theta-like [Anolis carolinensis]
Length = 2435
Score = 587 bits (1514), Expect = e-164, Method: Compositional matrix adjust.
Identities = 324/802 (40%), Positives = 476/802 (59%), Gaps = 66/802 (8%)
Query: 499 LKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFV 557
L D L L++W LP + Y G+ +++ WQ ECL V VL+ +NLVY A TSAGK+ V
Sbjct: 147 LADKLLLANWGLPKAVLEKYNSLGMVRMFQWQAECLMVGQVLEGKNLVYSAPTSAGKTLV 206
Query: 558 AEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDT 617
AE+L+L+R++ T K AL +LP++S+ EK +L+ + + G V +Y G+
Sbjct: 207 AELLILKRVLETRKKALFILPFISVAKEKKYYLQAIFQEAGVRVEAYIGSISPSIRFSAL 266
Query: 618 SVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEG 677
VAVCTIE+AN L+NR++EE L IGI+VIDELHM+ D RGYLLELLLTK+R+
Sbjct: 267 DVAVCTIERANGLLNRLIEEKALDSIGIVVIDELHMLGDSQRGYLLELLLTKVRFL---- 322
Query: 678 TSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYI 737
+ +N T G + ++ +QIVGMSAT+PN+ +A WL A LY T+FRPVPL E +
Sbjct: 323 ---TEKMKNKQTRMG-SPLSNMIQIVGMSATIPNLDLLASWLNAELYHTDFRPVPLVEQV 378
Query: 738 KVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA- 796
K+G+ IY M +VR I ++ D DH+V LC E VQ+GHSVLIFC S+ CE A
Sbjct: 379 KIGSKIYDDSMKIVREIQPLLHIKN-DEDHVVSLCYETVQDGHSVLIFCPSKSWCEKLAD 437
Query: 797 ---------RHVSKFLKKFSINVHSS-DSEFIDITSAIDALRRCPAGLDPVLEETLPSGV 846
+H+SK L+K S + D+ I+ + L+ CP+GLD +L+ T+ GV
Sbjct: 438 IIAREFYNLQHLSKGLQKTSTTAPVTLDTRRIE--ELMGQLKNCPSGLDCMLQRTIKWGV 495
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
A+HHAGLT +ER+++E +R+G++RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 496 AFHHAGLTFDERDIIEVAFRQGVLRVLVATSTLSSGVNLPARRVIIRTPMFGSRLLDVLT 555
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSC-LSEDKNGMT----H 961
Y+QMAGRAGR G+DT GES+L+CKP E K + LL P+ SC LS++ G+T
Sbjct: 556 YKQMAGRAGRKGVDTIGESILVCKPSEKSKGVTLLQGQLRPVRSCLLSQEGEGITSSMVR 615
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLLN-STKPFQDVVKSAQD--------SLRWLCHRKF 1012
AILE++ G+ + EDI Y CTL S K QD+ + + S++WL +F
Sbjct: 616 AILEIIVSGVADSPEDIQHYASCTLHGASLKNMQDIEREEERMCLGPIDASVQWLLENEF 675
Query: 1013 LEW---NEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTP 1069
+ +E ++YS T LG A SS P +L + DL RA + FVL +DLH +YL TP
Sbjct: 676 IRISVSDEGKEIYSATQLGCATLFSSFSPTAALEIFADLQRAMKSFVLENDLHSIYLVTP 735
Query: 1070 INVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGL 1128
+ + + DW ++ + +L + V VG+ E +L + K+ T+
Sbjct: 736 VYEDWAKIDWYRFFCLWEKLPVSMRRVAELVGIEESFLA-------FSVKGKVITKTEKQ 788
Query: 1129 HGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQAL 1188
H + + + KRF+ +L L L+ E P+ V + + RG +Q+L
Sbjct: 789 H------------------RQMAIHKRFFTSLALLDLINEVPLNYVAKKYGCNRGQLQSL 830
Query: 1189 QENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALY 1248
Q++A +A M+++FC RLGW+++E L+++FQ+R++FG++ E+ +L I + ARALY
Sbjct: 831 QQSAATYAGMITIFCNRLGWHNMEQLLSQFQSRLTFGIQRELCDLVRISLLNAQCARALY 890
Query: 1249 KAGLRTPLAIAEASISEIVKAL 1270
AG T +A ++ E+ KA
Sbjct: 891 NAGFITVADVANGTVMEVEKAF 912
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 218/720 (30%), Positives = 331/720 (45%), Gaps = 115/720 (15%)
Query: 1533 GLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEI 1592
GLAVCW +Y++L + L + L S D+N LT +LE ++ +
Sbjct: 1752 GLAVCWGGKDAFYISLQQKL-KEQIEMSASLAPPSLDQN-LTVAERLEHLQSCLQD---- 1805
Query: 1593 MEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDG 1652
KRD F+ M IQ K ++ + G++L G+ E+ + LL P +
Sbjct: 1806 -SKRD---FSLAMYEFIQHYK----TLLKACGISLAGS---FEDPKVACWLLDPGSNERS 1854
Query: 1653 IDMCIVSWI---LWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCC 1709
+ + S++ L+ D+ + + S A+A+ SGR+ RAA
Sbjct: 1855 LHNMVASFLPEELFLLDKIGTG-------QGNQSIGLNASADHSGRY-----RAAVESVL 1902
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
L L LL + L + +E+P LA +EL GIG C +++++
Sbjct: 1903 -----VFHLMDKLSALLQKDNLQDIFHKMEMPNQYCLALLELNGIGFSTAECETQKHVME 1957
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNK---GKQ---------- 1816
KL E + Y LAG FSL DIA VL+ LKLP +G +K GK+
Sbjct: 1958 AKLSETENQIYQLAGHSFSLTCPDDIAEVLFLELKLP-SDGESKMQRGKKTLGYTGRAVV 2016
Query: 1817 ---------HPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQK 1867
ST K L+ L+ HP+ +I E R K+ N I L R +
Sbjct: 2017 NGNRVRLSKQFSTTKGVLEKLKALHPLPGLILEWR---KITNAITKVIFPLQREKLLNPI 2073
Query: 1868 YTLHGHWL--QTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINA---- 1921
+ + QT+TATGR+S EPN+Q V E +M + H NA
Sbjct: 2074 LGMERIYPVSQTNTATGRISFREPNIQNVPKDFEIEMPILVEESPPTQRQHKMFNAPRNR 2133
Query: 1922 -----------------------------RDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
R F+P ++LAADYSQ+ELR++AH
Sbjct: 2134 NRKSSVLPCEPKNLTERLTSKKIPFAVSMRHAFVPF-PGGLILAADYSQLELRILAHLCC 2192
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D L+ L+ DVF IAA W + ++VG+ R Q K++ YG++YG+G +L EQ+
Sbjct: 2193 DRRLLQALND-GADVFRSIAAEWKMMAPEAVGNDLRQQAKQICYGMIYGIGAKSLGEQMG 2251
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+A I SFKS +PG+ +L V C+Q G+V+++ GR+R+L I+ N +K++
Sbjct: 2252 VDEKDASYYIDSFKSRYPGIQKFLRETVKKCNQDGFVQTIMGRRRYLPTIRESNPYKKAQ 2311
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSI-------------IVGGVYKPDSSLAANFQML 2119
A+RQAVN++ QGSAADI+K A +NI + S +A Q++
Sbjct: 2312 AERQAVNTVVQGSAADIVKTATVNIQKQLEALPSAVKSFEHLCSSTQNKWSGMAEKRQIM 2371
Query: 2120 --KGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
K +LQ+HDEL+ EV + + +V+ ME A L V L VK++VGS+WG L+
Sbjct: 2372 YPKHGGFFILQLHDELLYEVAEDSMIQVAQIVKHEMEHAVKLSVKLSVKVKVGSSWGDLQ 2431
>gi|260816346|ref|XP_002602932.1| hypothetical protein BRAFLDRAFT_251779 [Branchiostoma floridae]
gi|229288246|gb|EEN58944.1| hypothetical protein BRAFLDRAFT_251779 [Branchiostoma floridae]
Length = 2215
Score = 587 bits (1513), Expect = e-164, Method: Compositional matrix adjust.
Identities = 326/810 (40%), Positives = 464/810 (57%), Gaps = 101/810 (12%)
Query: 503 LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEIL 561
L LSSW LP + Y I++L+ WQ ECL VL +NLVY A TSAGK+ VAE+L
Sbjct: 1 LLLSSWGLPESVFQCYHDNRITQLFEWQAECLRTGDVLAGKNLVYSAPTSAGKTMVAELL 60
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAV 621
ML+R++ T K + +LP+VS+ EK +L+ LL G V Y G Q VAV
Sbjct: 61 MLKRVLETHKKGIFILPFVSVAREKMLYLKTLLFEAGVKVDGYMGGQSPAGGFSSVDVAV 120
Query: 622 CTIEKANSLVNRMLEEGRLSEIG--------------IIVIDELHMVADQNRGYLLELLL 667
CTIEKANSLVNR++E+G++ ++G +V+DELHMV D +RGYLLELLL
Sbjct: 121 CTIEKANSLVNRLIEDGKIDQLGKSHYSPNKYTGVTGTMVVDELHMVGDSHRGYLLELLL 180
Query: 668 TKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETN 727
TK+RY + +GT + + +P +QIVGMSAT+PN+ +A WL A LY+T+
Sbjct: 181 TKIRYVTSK----------TGTDNKETNP---VQIVGMSATLPNLDLLARWLDAELYQTD 227
Query: 728 FRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCS 787
FRPVPL E +KVG+ +Y+ +M D D +V LC E V EGHSVL+FC
Sbjct: 228 FRPVPLTECVKVGSTMYNNEMK------------KGDEDQVVGLCYETVSEGHSVLVFCP 275
Query: 788 SRKGCESTARHVSKFLKKFSINVHSSDSEFID------------ITSAIDALRRCPAGLD 835
++ CE A +++ ++IN + + + + ++ LRR P GLD
Sbjct: 276 TKNWCEKLAETIAREF--YNINRVPPEEKRTEGNLPYVQLNRQVLQDVVEQLRRTPVGLD 333
Query: 836 PVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQP 895
+L +P GVAYHHAGL+ +ER+++E +R+G +RVL ATSTL++GVNLPARRVI R P
Sbjct: 334 HMLGRVVPYGVAYHHAGLSFDERDIIEGAFRQGNLRVLVATSTLSSGVNLPARRVIIRTP 393
Query: 896 RIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSED 955
+D Y+QMAGRAGR G+D++GES+L+CK E K L+ P+HSCL +
Sbjct: 394 MFHGKVLDSLVYKQMAGRAGRKGVDSQGESVLVCKERERSKATTLIRSGLSPVHSCLHRE 453
Query: 956 -----KNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDS-----LR 1005
+ M AILE++AGG+ ++ D+ RY CT+L + DV DS ++
Sbjct: 454 TGHDVSSSMKRAILEIIAGGVARSPTDVERYASCTMLAAG--MSDVTTDNTDSAIHSCIQ 511
Query: 1006 WLCHRKFLEWNE-------DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLA 1058
+L +F+ E T+ Y T LG A S+L P+E+L+V DL RA + FVL
Sbjct: 512 FLLEHEFIRLREIQAEDGSPTQEYQPTQLGSATLASALAPDEALVVFADLQRAMKSFVLE 571
Query: 1059 SDLHLVYLSTPI-NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGA-PMR 1116
++LH+++ TPI N DW Y + +L + V VGV E YL R G P++
Sbjct: 572 NELHILFQVTPIYNDWSNLDWYHYLCLYEKLPTHMRRVAELVGVEEGYLARAVRGRLPVK 631
Query: 1117 ISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCE 1176
+LR L V KRFY AL+L L QE P+ V +
Sbjct: 632 TPKQLRQ--------------------------LAVHKRFYTALVLQDLTQEVPLPVVVK 665
Query: 1177 TFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTI 1236
+ +G++Q+LQ++A FA MV+VFC RLGW++LE L+++FQ+R++FGV+ E+VEL I
Sbjct: 666 KYSCTKGVLQSLQQSAATFAGMVTVFCSRLGWHNLELLLSQFQSRLTFGVQRELVELVRI 725
Query: 1237 PYVKGSRARALYKAGLRTPLAIAEASISEI 1266
+ G RAR L+ AG T +A A + ++
Sbjct: 726 SLLNGLRARTLFNAGFHTVAMLAAAEVRDV 755
Score = 255 bits (652), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 256/522 (49%), Gaps = 78/522 (14%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L KLL ++ L A ++E+P + LA MEL G G C ++Q KLR LE++AY
Sbjct: 1702 LDKLLEAQGLSTAFRDVEMPSLVTLARMELNGAGFSPVECETQCQIMQAKLRMLEEQAYQ 1761
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPI--------------------PEGHNKGKQHPSTD 1821
LAG F+L + DIA VL+ LKLP P K +H ST
Sbjct: 1762 LAGHTFALTSPDDIAQVLFLELKLPANGDPSSTTNPQPRKTLGTARPARGRKPLKHLSTS 1821
Query: 1822 KHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTS--- 1878
K L+ L+ H + VI E R ++ SL ++ QK ++ L
Sbjct: 1822 KDVLEKLKKFHALPGVILEWRRISN----------SLTKVVFPLQKEKVYNPRLNMDRIY 1871
Query: 1879 ------TATGRLSMEEPNLQCVEHMVEFKMSN-----------------------EDIYG 1909
TATGR++ +PNLQ + E +M G
Sbjct: 1872 GNCDLHTATGRVTFHDPNLQNIPKDFEIEMPTIIGDSPPPGCGETVSKRKGRKVVRRTDG 1931
Query: 1910 GNAEVDHC----KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG 1965
E D ++ R FIP Q +LLAADYSQ+ELR++AH S+D L +L+
Sbjct: 1932 RRVESDGAGQAFSVSLRHAFIPFQ-GGVLLAADYSQLELRIIAHLSQDSKLTQVLNSGQ- 1989
Query: 1966 DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSF 2025
DVF IA++W G + + V + R Q K+L YG++YG+G L EQL E I++F
Sbjct: 1990 DVFKAIASQWKGVAMEDVSDKLRQQAKQLCYGMIYGIGAKALGEQLGVDEEEGACFIETF 2049
Query: 2026 KSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGS 2085
KS + G+ +LH V C + G+V+++ GR+R+L I GN+ + A+RQAVN+ QGS
Sbjct: 2050 KSKYTGMRRYLHTTVDQCKKDGFVQTMAGRRRYLPGITEGNHHVRCHAERQAVNTTVQGS 2109
Query: 2086 AADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR----------LLLQVHDELVL 2135
AAD++K AM++I + S + Q R + L+LQ+HDEL+
Sbjct: 2110 AADLVKKAMVSIDQKLQKLFPATRRSHRQDTQKRSRRSQQPSSPPRGAYLILQLHDELIY 2169
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
EV +++ +V+ ME+A L V L VK++VG TWG LE
Sbjct: 2170 EVRREDVQQVAQIVKHEMENAVKLSVVLPVKVKVGPTWGRLE 2211
>gi|301786873|ref|XP_002928855.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Ailuropoda
melanoleuca]
Length = 2634
Score = 587 bits (1512), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/806 (39%), Positives = 470/806 (58%), Gaps = 75/806 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 112 DKLLLANWGLPVAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 171
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+LML+R++ K AL +LP+VS+ EK +L+ L + +G +V Y G+ +
Sbjct: 172 LLMLKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGINVDGYMGSASPRGHFTSLDI 231
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y + S
Sbjct: 232 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITHKSAS 291
Query: 680 DSSSGENSGTSSGKADP-AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+ ADP ++ +QIVGMSAT+PN+ VA WL A LY TNFRPVPL E +K
Sbjct: 292 ---------CQADLADPLSNAVQIVGMSATLPNLETVASWLNAELYHTNFRPVPLLESVK 342
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+GN+IY M +VR + G D DH+V LC E + + HSVL+FC S+K CE A
Sbjct: 343 IGNSIYDSSMKLVREFQPNLQVKG-DEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADI 401
Query: 799 VSKFLKKFSINVHSSDSEFID-------------ITSAIDALRRCPAGLDPVLEETLPSG 845
++ N+H + + +D L+R P+GLD VL++T+P G
Sbjct: 402 IAHEF----YNLHHQAKGLVRSSELPPVILEQKALLEVMDQLKRSPSGLDSVLQKTIPWG 457
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGT 905
VA+HHAGLT EER+++E +R+G +RVL ATSTL++GVNLPARRVI R P +D
Sbjct: 458 VAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIRTPIFSGQPLDIL 517
Query: 906 RYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKN-----GMT 960
Y+QM GRAGR G+DT GES+L+CK E K + LL S P+ SCL + M
Sbjct: 518 TYKQMVGRAGRKGVDTVGESILVCKNSEKSKGIALLQGSLKPIRSCLQRQEGEEVTASMI 577
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHR 1010
AILE++ GG+ T++D+ Y CT L S K + ++ Q S++ WL
Sbjct: 578 RAILEIIVGGVASTSQDMQTYASCTFLAASMKEGKLGIQKNQKSVQLGAIEACVMWLQEN 637
Query: 1011 KFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY 1065
+F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH+VY
Sbjct: 638 EFIQITEASDGTEGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVY 697
Query: 1066 LSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDS 1124
L TP+ + DW ++ + +L + V VGV E +L R G K+
Sbjct: 698 LVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVIAR 750
Query: 1125 TKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGM 1184
T+ H + + + KRF+ +L+L L+ E P+ E+ + + +RG
Sbjct: 751 TERQH------------------RQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCSRGQ 792
Query: 1185 VQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRA 1244
+Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RA
Sbjct: 793 IQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRA 852
Query: 1245 RALYKAGLRTPLAIAEASISEIVKAL 1270
R LY +G T +A A I+E+ L
Sbjct: 853 RFLYASGFLTVADLARADIAEVETVL 878
Score = 245 bits (626), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 217/737 (29%), Positives = 318/737 (43%), Gaps = 141/737 (19%)
Query: 1533 GLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQR-WKRIGE 1591
GLAVCW YY +L K+ H L+ S D + +K+R W +
Sbjct: 1947 GLAVCWGGRDAYYFSLQKE--QTHPEISSSLVAPSLDPGL--------TVKERIWYLLSC 1996
Query: 1592 IMEKRDVRKFTWNMKVQIQVLKHAAVSIQRF---GGLNLVGTSLGLENVGSSFLLLSPVH 1648
E+ D K +V I F + L+ + LE
Sbjct: 1997 FQEESD---------------KERSVIIYDFIQSYKILLLSCGISLEQSYE--------- 2032
Query: 1649 LKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSE--------AAAAANRSGRWKNQM 1700
D + W+L PD S P L V L E G N
Sbjct: 2033 -----DPKVACWLLDPD---SKEPTLHSIVSSFLPHELPLLDGIETGQGIQSLGLNVNSE 2084
Query: 1701 RRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEG 1760
+ + A+ + L LL E L + +E+P LA +EL GIG
Sbjct: 2085 HSGRYRASVESILTFNAM-NQLNSLLKKENLKDVFCKVEMPSQYCLALLELNGIGFSTAE 2143
Query: 1761 CLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNK------- 1813
C ++++Q KL +E +AY LAG FS ++ DIA VL+ LKLP P G K
Sbjct: 2144 CESQKHIMQAKLDAIETQAYQLAGHSFSFTSSDDIAEVLFLELKLP-PNGEIKNQNSKKT 2202
Query: 1814 ----------------GKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
GKQ ST K L+ L+ HP+ +I E R + + + +
Sbjct: 2203 LGSTRRGNDNGRKLKLGKQF-STSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQR 2261
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG-------- 1909
R++ ++ Q+ TATGR++ EPN+Q V E KM + G
Sbjct: 2262 EKRLNPFLGMERIYP-VSQSHTATGRVTFTEPNIQNVPRDFEIKMPT--VVGESPPSQAL 2318
Query: 1910 -------GNAEVDHCKINA---------------------RDFFIPSQENWILLAADYSQ 1941
+ C IN+ R F+P ++LAADYSQ
Sbjct: 2319 GKGLLPMNRGKEKSCGINSGHQAQMEERASDRGMPFSVSMRHAFVPF-PGGLILAADYSQ 2377
Query: 1942 IELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYG 2001
+ELR++AH S D LI +L+ DVF IAA W +SVG R Q K++ YGI+YG
Sbjct: 2378 LELRILAHLSHDRRLIQVLNT-GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYG 2436
Query: 2002 MGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSK 2061
MG +L EQ+ N+A I SFKS + G+ ++ V +C + G+V+++ GR+R+L
Sbjct: 2437 MGAKSLGEQMGIKENDAACYIDSFKSRYTGINHFMRETVKNCKRDGFVQTILGRRRYLPG 2496
Query: 2062 IKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI-------HSIIVGGVYK------- 2107
I N K+ A+RQA+N+ QGSAADI+K+A +NI HS ++
Sbjct: 2497 INDNNPYHKAHAERQAINTTVQGSAADIVKVATVNIQKQLETFHSTFKSHGHREGMLQSE 2556
Query: 2108 -----PDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
P L F ++G +LQ+HDEL+ EV + + +V+ MESA L V
Sbjct: 2557 RTGLLPKRKLQGVFCPIRGGF-FILQLHDELLYEVAEEDVVQVAQIVKNEMESAMELSVK 2615
Query: 2163 LLVKIQVGSTWGSLEPF 2179
L VK+++G++WG L+ F
Sbjct: 2616 LKVKVKIGASWGELKDF 2632
>gi|410970532|ref|XP_003991733.1| PREDICTED: DNA polymerase theta [Felis catus]
Length = 2597
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/806 (39%), Positives = 473/806 (58%), Gaps = 75/806 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP+ + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 73 DKLLLANWGLPAAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 132
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+LML+R++ K AL +LP+VS+ EK +L+ L + +G +V Y G+ +
Sbjct: 133 LLMLKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGINVDGYMGSASPTRRFSSLDI 192
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y + S
Sbjct: 193 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITHKSAS 252
Query: 680 DSSSGENSGTSSGKADP-AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+ A P ++ +QIVGMSAT+PN+ VA WL A LY TNFRPVPL E +K
Sbjct: 253 ---------CQTDLASPLSNAVQIVGMSATLPNLELVASWLNAELYHTNFRPVPLLESVK 303
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+GN+IY M +VR + + G D DH+V LC E + + HSVL+FC S+K CE A
Sbjct: 304 IGNSIYDSSMKLVREFQPSLQVKG-DEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADI 362
Query: 799 VSKFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPAGLDPVLEETLPSG 845
+++ N+H + + +D L+R P+GLD VL++T+P G
Sbjct: 363 IAREF----YNLHHQAEGLVRSSELPPVVLEQKSLLEVMDQLKRSPSGLDSVLQKTIPWG 418
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGT 905
VA+HHAGLT EER+++E +R+G +RVL ATSTL++GVNLPARRVI R P +D
Sbjct: 419 VAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIRTPIFSGRPLDIL 478
Query: 906 RYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKN-----GMT 960
Y+QM GRAGR G+DT GES+L+CK E K + LL S P+ SCL + M
Sbjct: 479 TYKQMVGRAGRKGVDTVGESILVCKNSEKSKGIALLQGSLKPVRSCLQRQEGEEVTASMI 538
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHR 1010
AILE++ GG+ T++D+ Y CT L S + + ++ QDS++ WL
Sbjct: 539 RAILEIIVGGMASTSQDMQTYASCTFLAASMRGGKLGIQKNQDSVQLGAIEACVMWLLEN 598
Query: 1011 KFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY 1065
+F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH+VY
Sbjct: 599 EFIQITEASDGTEGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVY 658
Query: 1066 LSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDS 1124
L TP+ + DW ++ + +L + V VGV E +L R G K+
Sbjct: 659 LVTPMFEDWTTIDWYRFFCLWEKLPISMKRVAELVGVEEAFLARCVKG-------KVVAR 711
Query: 1125 TKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGM 1184
T+ H + + + KRF+ +L+L L+ E P+ E+ + + +RG
Sbjct: 712 TERQH------------------RQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCSRGQ 753
Query: 1185 VQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRA 1244
+Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RA
Sbjct: 754 IQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRA 813
Query: 1245 RALYKAGLRTPLAIAEASISEIVKAL 1270
R Y +G T +A A+I+E+ L
Sbjct: 814 RFFYASGYLTVADLARANIAEVETVL 839
Score = 244 bits (624), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 247/900 (27%), Positives = 381/900 (42%), Gaps = 183/900 (20%)
Query: 1417 PPVPFVGPGTGGVEFNV-NASEIKIPDTTLSVQLGKN-AIGTITSNRDLDLEVQ------ 1468
PP P + V ++ S +K+ +QLGK+ + G+ + ++ DL +
Sbjct: 1742 PPTPIPASASKLVVPSILGTSSVKLQKMHSVLQLGKSYSFGSSSDIKNQDLSSESRDGLK 1801
Query: 1469 -DRPNRDPCL---VNKD------RACNKGPINAINASGG---FDCFLDRWEATHEFYFDI 1515
DRP RD +++D +C+ + I+ + F F+ W+ F +
Sbjct: 1802 KDRPIRDTSFSLQLSQDGSQLTAASCSPESLAIIDVASDQILFQTFIKEWQCKKRFSISL 1861
Query: 1516 HYDKHSEANS------GVLFE------------------------IHGLAVCWENSPVYY 1545
+K S S G F+ + GLAVCW YY
Sbjct: 1862 ACEKISNLRSSKNAAIGGRFKQVSLPQETPIRDDGVPVKGCDDILVVGLAVCWGGRDAYY 1921
Query: 1546 VNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQR-WKRIGEIMEKRDVRKFTWN 1604
+L K+ H L+ S D ++ +K R W + E+ D +
Sbjct: 1922 FSLQKE--QKHPEISSSLVPPSLDPSL--------TVKDRMWYLLSCFQEESDKER---- 1967
Query: 1605 MKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWP 1664
I + IQ + L L+ + LE D + W+L P
Sbjct: 1968 ---SIIIYDF----IQSYKIL-LLSCGISLEQSYE--------------DPKVACWLLDP 2005
Query: 1665 DDERSSNPNLEKEVKKRLSSEAAAAAN-RSGRWKNQMR---RAAHNGCCRRVAQTRALCS 1720
D S P L V L E +G+ + H+G R ++ + +
Sbjct: 2006 D---SKEPTLHSIVSSFLPHELPLLEGIETGQGVQSLGLNVNTEHSGRYRASMESILIFN 2062
Query: 1721 V---LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L LL E L + +E+P LA +EL GIG C ++++Q KL +E
Sbjct: 2063 AMNQLNSLLKKENLQDVFCKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIET 2122
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------G 1814
+AY LAG FS ++ DIA VL+ LKLP P G K G
Sbjct: 2123 QAYQLAGHSFSFTSSDDIAEVLFLELKLP-PNGERKNQGSKKTLGSTRRMNDNGRKLRLG 2181
Query: 1815 KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHW 1874
KQ ST K L+ L+ HP+ +I E R + + + + R++ ++
Sbjct: 2182 KQL-STSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-V 2239
Query: 1875 LQTSTATGRLSMEEPNLQCVEHMVEFKMSNE---------------DIYGGNAEVDHCKI 1919
Q+ TATGR++ EPN+Q V E +M Y G + C +
Sbjct: 2240 SQSHTATGRITFTEPNIQNVPRDFEIEMPTLVGESPPSQALGKGLLPTYRGRKKTS-CSL 2298
Query: 1920 NA---------------------RDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIG 1958
N+ R F+P ++LAADYSQ+ELR++AH S D LI
Sbjct: 2299 NSGHQAQMEERASDRGMPFSVSMRHAFVPF-PGGLILAADYSQLELRILAHLSHDQRLIQ 2357
Query: 1959 LLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEA 2018
+L+ DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A
Sbjct: 2358 VLNT-GTDVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDA 2416
Query: 2019 KEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAV 2078
I SFKS + G+ ++ V +C + G+V+++ GR+R+L I N K+ A+RQA+
Sbjct: 2417 ACYIDSFKSRYTGINHFMRETVKNCKRDGFVQTILGRRRYLPGINDNNPYHKAHAERQAI 2476
Query: 2079 NSICQGSAADIIKIAMINI-------HSIIVGGVYK------------PDSSLAANFQML 2119
N+ QGSAADI+KIA +NI HS ++ P L F +
Sbjct: 2477 NTTVQGSAADIVKIATVNIQKQLETLHSTFKSHGHREGMLQSDRTGLLPKRKLQGMFCPI 2536
Query: 2120 KGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+G +LQ+HDEL+ EV + + +V+ ME+A L V L VK+++G++WG L+ F
Sbjct: 2537 RGGF-FILQLHDELLYEVAEEDVVQVAQIVKNEMENAIKLSVKLKVKVKIGASWGELKDF 2595
>gi|13892061|gb|AAK39635.1| DNA polymerase theta [Homo sapiens]
Length = 2724
Score = 585 bits (1508), Expect = e-163, Method: Compositional matrix adjust.
Identities = 323/802 (40%), Positives = 476/802 (59%), Gaps = 74/802 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 200 DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 259
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 260 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDI 319
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y T
Sbjct: 320 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI----TR 375
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S+S + SS ++ +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E +KV
Sbjct: 376 KSASCQADLASS----LSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKV 431
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DH+V LC E + + HSVL+FC S+K CE A +
Sbjct: 432 GNSIYDSSMKLVREFEPMLQVKG-DEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADII 490
Query: 800 SKFLKKFSINVHSSDSEFI--------------DITSAIDALRRCPAGLDPVLEETLPSG 845
+ ++F H ++ E + ++ +D LRR P+GLD VL++T+P G
Sbjct: 491 A---REFYNLHHQAEGEGLVKPSECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWG 547
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGT 905
VA+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 548 VAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDIL 607
Query: 906 RYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNGMT 960
Y+QM GRAGR G+DT G S+LICK E K + LL S P+ SCL E M
Sbjct: 608 TYKQMVGRAGRKGVDTVG-SILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTGSMI 666
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHR 1010
AILE++ GG+ T++D+H Y CT L S K + ++ Q+S++ WL
Sbjct: 667 RAILEIIVGGVASTSQDMHTYAACTFLAASMKEGKQGIQRNQESVQLGAIEACVMWLLEN 726
Query: 1011 KFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY 1065
+F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH++Y
Sbjct: 727 EFIQSTEASDGTEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILY 786
Query: 1066 LSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDS 1124
L TP+ + DW ++ + +L + V VGV E +L R G K+
Sbjct: 787 LVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVAR 839
Query: 1125 TKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGM 1184
T+ H + + + KRF+ +L+L L+ E P+ E+ + + RG
Sbjct: 840 TERQH------------------RQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQ 881
Query: 1185 VQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRA 1244
+Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RA
Sbjct: 882 IQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRA 941
Query: 1245 RALYKAGLRTPLAIAEASISEI 1266
R LY +G T +A A+I E+
Sbjct: 942 RVLYASGFHTVADLARANIVEV 963
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 264/542 (48%), Gaps = 103/542 (19%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY LAG
Sbjct: 2197 LLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAG 2256
Query: 1785 MKFSLYTAADIANVLYGHLKLPIP-EGHNKGKQHP--------------------STDKH 1823
FS ++ DIA VL+ LKLP E N+G + ST K
Sbjct: 2257 HSFSFTSSDDIAEVLFLELKLPPNREMKNQGSKKTLGSTRRGIDNGRKLRLGRQFSTSKD 2316
Query: 1824 CLDLLRHEHPIVPVIKEHRTLA-------------KLLNCTLGSICSLARISMSTQKYTL 1870
L+ L+ HP+ +I E R + K LN LG + RI +Q +T
Sbjct: 2317 VLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKCLNPFLG----MERIYPVSQSHT- 2371
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN-------------------EDIYGGN 1911
ATGR++ EPN+Q V E KM Y
Sbjct: 2372 ---------ATGRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGKYKKG 2422
Query: 1912 AEVD-HCK---------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
V+ C+ I+ R F+P IL AADYSQ+ELR++AH S D
Sbjct: 2423 FSVNPRCQAQMEERAADRGMPFSISMRHAFVPFPGGSIL-AADYSQLELRILAHLSHDRR 2481
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
LI +L+ DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+
Sbjct: 2482 LIQVLNT-GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKE 2540
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
N+A I SFKS + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+R
Sbjct: 2541 NDAACYIDSFKSRYTGINQFMTETVKNCKRDGFVQTILGRRRYLPGIKDNNPYRKAHAER 2600
Query: 2076 QAVNSICQGSAADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQMLKGR- 2122
QA+N+I QGSAADI+KIA +NI HS G+ + D + + + L+G
Sbjct: 2601 QAINTIVQGSAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDRTGLSRKRKLQGMF 2660
Query: 2123 CRL-----LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
C + +LQ+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L+
Sbjct: 2661 CPIRGGFFILQLHDELLYEVVEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELK 2720
Query: 2178 PF 2179
F
Sbjct: 2721 DF 2722
>gi|345318618|ref|XP_001521144.2| PREDICTED: DNA polymerase theta, partial [Ornithorhynchus anatinus]
Length = 1881
Score = 584 bits (1505), Expect = e-163, Method: Compositional matrix adjust.
Identities = 331/798 (41%), Positives = 474/798 (59%), Gaps = 64/798 (8%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L+SW LP E+ Y++ G+ +++ WQ ECL + VL RNLVY A TSAGK+ VAE
Sbjct: 13 DKLLLASWGLPHEVLETYRRLGVVRMFEWQAECLLLGRVLGGRNLVYSAPTSAGKTLVAE 72
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L++++ T K AL +LP+VS+ EK +LE L + +G V Y G+ V
Sbjct: 73 LLILKKVLETRKKALFILPFVSVAKEKKYYLENLFQEVGLRVGGYMGSSSPAGRFSSLDV 132
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ + +
Sbjct: 133 AVCTIERANGLINRLIEEEKMDLLGMVVVDELHMLGDSHRGYLLELLLTKVLFVTRRTAA 192
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
+S N D G+QIVGMSAT+PN+ +A WL A LY+T+FRPVPL E +K+
Sbjct: 193 SQASSPN--------DFREGVQIVGMSATLPNLGLLASWLNAELYQTDFRPVPLLERVKI 244
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
G A+Y + +VR + + G D DH+V LC EV+ +GHSVL+FC S+ CE A +
Sbjct: 245 GGAVYDASLKLVRELQPVLRVKG-DEDHVVSLCYEVIHQGHSVLVFCPSKSWCEKLADII 303
Query: 800 SKFLKKFSINVHSSDSEFIDITSA-----IDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
++ +++ H S + + A D L+R P+GLD VL+ T+P GVA+HHAGLT
Sbjct: 304 AREF--YNLQQHPSHPAPVVLDQAGLQEVTDQLKRSPSGLDSVLQRTVPWGVAFHHAGLT 361
Query: 855 VEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA 914
+ER+++E +R+GLVR L ATSTL++GVNLPARRVI R P G +D Y+QMAGRA
Sbjct: 362 FDERDIIEGAFRQGLVRALVATSTLSSGVNLPARRVIIRTPTFGGRPLDILTYKQMAGRA 421
Query: 915 GRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL-----SEDKNGMTHAILEVVAG 969
GR G+DT GES+L+CK E K + LL S P+ SCL E M AILE++ G
Sbjct: 422 GRKGVDTVGESILVCKYSEKSKGIALLQGSLKPVRSCLRTGAGEEMTASMIRAILEIIVG 481
Query: 970 GIVQTAEDIHRYVRCTL-LNSTKPFQDVVKSAQDSLR---------WLCHRKFL---EWN 1016
G+ TA+++ Y CTL S + Q QD++ WL +F+ E
Sbjct: 482 GVASTAQEVQTYASCTLSAASLREGQRAALGDQDTVERGAIEACVAWLLENEFIRVREAG 541
Query: 1017 EDT---KLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE 1073
ED K+Y T LG A SSL P E+L V DL RA +GFVL +DLH++YL TP+ +
Sbjct: 542 EDKGNRKVYQPTHLGLATLSSSLSPTEALGVFADLQRAMKGFVLENDLHILYLVTPVYED 601
Query: 1074 -VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKL 1132
+ DW ++ + +L + V VG+ E +L R G K+ T+ H
Sbjct: 602 WITIDWYQFFCLWEKLPTSMKRVAELVGIEEGFLARSVKG-------KIVAKTEKQH--- 651
Query: 1133 EYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENA 1192
+ + + KRF+ +L L L+ E P+ E+ E F +RG +Q+LQ++A
Sbjct: 652 ---------------RQMAIHKRFFTSLALLDLINEVPLKEMTEKFGCSRGQIQSLQQSA 696
Query: 1193 GRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGL 1252
+A MV+VF RLGW+++E L+ +FQ+R+SFGV+ E+ +L + + RARALY AGL
Sbjct: 697 ATYAGMVTVFSNRLGWHNMEQLLCQFQSRLSFGVQRELCDLVRVSLLNAQRARALYAAGL 756
Query: 1253 RTPLAIAEASISEIVKAL 1270
T +A A + AL
Sbjct: 757 VTVADLARAGADRVEAAL 774
>gi|348566979|ref|XP_003469279.1| PREDICTED: DNA polymerase theta-like isoform 1 [Cavia porcellus]
Length = 2569
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 322/801 (40%), Positives = 476/801 (59%), Gaps = 74/801 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ +++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 67 DKLLLANWGLPKAVQQKYHSFGVKQMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 126
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ T K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 127 LLILKRVLETQKKALFILPFVSVAKEKKYYLQNLFQEVGIKVDGYMGSTSPTGHFSSLDI 186
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y + S
Sbjct: 187 AVCTIERANGLINRLIEEDKMDLLGMVVVDELHMLGDCHRGYLLELLLTKICYLTQKSAS 246
Query: 680 DSSSGENSGTSSGKADP-AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+ A P ++ +Q+VGMSAT+PN+ VA WL A LY T+FRPVPL E IK
Sbjct: 247 RQAD---------LASPLSNAVQVVGMSATLPNLELVASWLNAELYHTDFRPVPLLESIK 297
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+GN+IY M ++R + +D DH+V LC E V + HSVL+FC S+K CE A
Sbjct: 298 IGNSIYDSSMKLIREFQPMLQV-KEDEDHVVSLCYETVCDNHSVLLFCPSKKWCEKLADI 356
Query: 799 VSKFLKKFSINVHSSD-----SEFI-------DITSAIDALRRCPAGLDPVLEETLPSGV 846
+++ + HS++ SEF + +D L+R P+GLD VL++T+P GV
Sbjct: 357 IAREFYRLH---HSAEGLGKQSEFTPPILEPKSLLEVVDQLKRSPSGLDSVLQKTVPWGV 413
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
A+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P ++
Sbjct: 414 AFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPVFSGHPLNILT 473
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHA 962
Y+QM GRAGR G+DT GES+LICK E K + LL S P+ SCL E M A
Sbjct: 474 YKQMVGRAGRKGVDTMGESILICKNSEKSKGIALLQGSLKPVCSCLQRQDGEITASMIRA 533
Query: 963 ILEVVAGGIVQTAEDIHRYVRCTLLNS--TKPFQDVVKSAQDSLR---------WLCHRK 1011
ILE++ GG+ T++DI Y CT L + TK Q + K+ QDS++ WL +
Sbjct: 534 ILEIIVGGVASTSQDIQIYASCTFLAASMTKEKQRIQKN-QDSVQLGAIEACVMWLLENE 592
Query: 1012 FLEWNEDT-----KLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
F++ ED +Y T LG A SSL P ++L + DL RA +GFVL +DLH+VYL
Sbjct: 593 FIQIIEDRNGTEGNVYHPTHLGTATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYL 652
Query: 1067 STPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDST 1125
TP+ + DW ++ + +L + V VGV E +L R G K+ T
Sbjct: 653 VTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVART 705
Query: 1126 KGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMV 1185
+ H + + + KRF+ +L+L L+ E P+ E+ + + RG +
Sbjct: 706 ERQH------------------RQMAIHKRFFTSLVLLDLISEIPLKEIIQKYGCNRGQI 747
Query: 1186 QALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1245
Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR
Sbjct: 748 QSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRAR 807
Query: 1246 ALYKAGLRTPLAIAEASISEI 1266
LY +G T +A A+++E+
Sbjct: 808 VLYASGFLTVADLARANVAEV 828
Score = 248 bits (634), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 215/740 (29%), Positives = 329/740 (44%), Gaps = 148/740 (20%)
Query: 1533 GLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEI 1592
GLA+CW YY++L K+ H L S D +
Sbjct: 1883 GLAICWGGRDAYYISLQKE--QKHSEISASLAPPSLDPAL-------------------- 1920
Query: 1593 MEKRDVRKFTWNMK--VQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLK 1650
VR+ W+++ +Q + K +V + F + + L++ G S +
Sbjct: 1921 ----TVRERMWHLRSCLQKESDKDRSVIMYDF----IQSYKILLQSCGISLE-------Q 1965
Query: 1651 DGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAA-----------------AAANRS 1693
+ D + W+L PD S+ P L V L E + S
Sbjct: 1966 NYEDPKVACWLLDPD---STEPTLHSMVTSYLPQELPLLEGLETGPGIQSLGLHVSTEHS 2022
Query: 1694 GRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWG 1753
GR++ + C + L LL E L + +E+P LA +EL G
Sbjct: 2023 GRYRASVESILVFNCMNQ----------LNSLLQKENLQDIFYKVEMPSQYCLALLELNG 2072
Query: 1754 IGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNK 1813
IG C ++++Q KL +E +AY LAG FS +A DIA VL+ LKLP P+G K
Sbjct: 2073 IGFSAVECESQKHVMQAKLDAIEMQAYQLAGHSFSFTSADDIAEVLFLELKLP-PDGEMK 2131
Query: 1814 -----------------------GKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNC 1850
G++ ST K L+ L+ HP+ +I E R + +
Sbjct: 2132 IQSSKKTLGSTRRGSERAQKQRLGRRF-STSKDVLNKLKALHPLPGLILEWRRITNAITK 2190
Query: 1851 TLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN------ 1904
+ + R++ + ++ Q+ TATGR++ EPN+Q V E KM
Sbjct: 2191 VVFPLQREKRLNPFLRMERIYP-VSQSHTATGRITFTEPNIQNVPRDFEIKMPTLVEESP 2249
Query: 1905 ------EDIY---------------GGNAEVDHCK-------INARDFFIPSQENWILLA 1936
D+ G A++ ++ R F+P ++LA
Sbjct: 2250 PSQSIGRDLLPMGRRQNKRRCVRNPGHQAQMKKASDRGMPFSVSMRHAFVPF-SGGLILA 2308
Query: 1937 ADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIY 1996
ADYSQ+ELR++AH S+D LI +L+ DVF IAA W +SVG + R Q K++ Y
Sbjct: 2309 ADYSQLELRILAHLSRDHRLIQVLNT-GADVFRSIAAEWKMTEPESVGDELRQQAKQICY 2367
Query: 1997 GILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRK 2056
GI+YGMG +L EQ+ + A I SFKS + G+ +L V +C + G+V+++ GR+
Sbjct: 2368 GIIYGMGAKSLGEQMGIKEDAAACYIDSFKSRYKGINCFLRETVKNCERDGFVQTVLGRR 2427
Query: 2057 RFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIH-SIIVGGVYKPDSSLAAN 2115
R+L I+ N K+ A+RQA+N+ QGSAADI+KIA +NI + +K S
Sbjct: 2428 RYLPGIRDNNPYRKAHAERQAINTTVQGSAADIVKIATVNIQRQLETCSAFKSHSHRERM 2487
Query: 2116 FQ------MLKGRCR----------LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALL 2159
Q + KG + +LQ+HDEL+ EV I + +V+ MESA L
Sbjct: 2488 LQSDGTGLLPKGELQGTSCPIRGGFFILQLHDELLYEVAEEDIVQVAQIVKNEMESAIKL 2547
Query: 2160 LVPLLVKIQVGSTWGSLEPF 2179
V L VK+++GS+WG L+ F
Sbjct: 2548 SVNLKVKVKIGSSWGELKDF 2567
>gi|351703749|gb|EHB06668.1| DNA polymerase theta, partial [Heterocephalus glaber]
Length = 2573
Score = 582 bits (1499), Expect = e-162, Method: Compositional matrix adjust.
Identities = 319/823 (38%), Positives = 479/823 (58%), Gaps = 87/823 (10%)
Query: 479 KKPVGNEKSDEAGTPSSSGMLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDG 537
K+PV ++++DE L L++W LP I Y G+ K++ WQ ECL +
Sbjct: 60 KQPVPDDQTDE-------------LLLANWGLPKAILQKYHSFGVKKMFEWQAECLLLGQ 106
Query: 538 VLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPL 597
VL+ +NLVY A TS+GK+ VAE+L+L+ ++ K AL +LP+VS+ EK +L+ L + +
Sbjct: 107 VLEGKNLVYSAPTSSGKTLVAELLILKCVLEMQKKALFILPFVSVAKEKKYYLQSLFQEV 166
Query: 598 GRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQ 657
G V Y G+ +AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D
Sbjct: 167 GIKVDGYMGSASPSGHFSSLDIAVCTIERANGLINRLIEENKMHLLGMVVVDELHMLGDS 226
Query: 658 NRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADP-AHGLQIVGMSATMPNVAAVA 716
+RGYLLELLLTK+ + + S + A P ++ +Q+VGMSAT+PN+ +A
Sbjct: 227 HRGYLLELLLTKICFLTQKSASRQAD---------LASPLSNAVQVVGMSATLPNLELIA 277
Query: 717 DWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVV 776
WL A LY T+FRPVPL E +K+GN+IY M ++R + G D DH+V LC E V
Sbjct: 278 SWLNAELYHTDFRPVPLLELVKIGNSIYDSSMKLIREFQPMLQVKGDD-DHVVSLCYETV 336
Query: 777 QEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVH------SSDSEFI-------DITSA 823
++ HSVL+FC S+K CE A +++ N+H + SEFI +
Sbjct: 337 RDNHSVLLFCPSKKWCEKLADIIAREF----YNLHHQAEGLAKASEFIPPILEQKSLLEV 392
Query: 824 IDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGV 883
+D L+R P+GLD VL++T+P GVA+HHAGLT EER+++E +R+GL+RVL ATSTL++GV
Sbjct: 393 VDQLKRSPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGV 452
Query: 884 NLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNE 943
NLPARRVI R P +D Y+QM GRAGR G+DT GES+L+CK E K + LL
Sbjct: 453 NLPARRVIIRTPIFSGRPLDILTYKQMVGRAGRKGVDTMGESILLCKNSEKSKGIALLQG 512
Query: 944 SCPPLHSCLS----EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVK 998
S P+ SCL E M AILE++ G+ T++D+ Y CT L S K + ++
Sbjct: 513 SLKPVRSCLQRQDGEVTASMIRAILEIIVSGMASTSQDMQIYASCTFLAASMKERKQGIQ 572
Query: 999 SAQDSLR---------WLCHRKFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIV 1044
QDS++ WL +F++ E + Y T LG A SSL P +L +
Sbjct: 573 KNQDSVQLGAIEACVMWLLENEFIQITEPSDATEGNAYHPTHLGTATLFSSLSPTNTLDI 632
Query: 1045 LDDLSRAREGFVLASDLHLVYLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSE 1103
DL RA +GFVL +DLH+VYL TP+ + DW ++ + +L + V VG+ E
Sbjct: 633 FADLQRAMKGFVLENDLHIVYLVTPMFEDWTTTDWYRFFCLWEKLPTSMKRVAELVGIEE 692
Query: 1104 PYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILS 1163
+L R G K+ T+ H + + + KRF+ +L+L
Sbjct: 693 GFLARCVKG-------KVVARTERQH------------------RQMAIHKRFFTSLVLL 727
Query: 1164 RLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVS 1223
L+ E P+ E+ + + RG VQ+LQ++A +A M++VF RLGW+++E L+++FQ R++
Sbjct: 728 DLISEIPLKEIIQKYGCNRGQVQSLQQSAAIYAGMITVFSSRLGWHNMELLLSQFQKRLT 787
Query: 1224 FGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEI 1266
FG++ E+ +L + + RAR LY +G T +A A+++E+
Sbjct: 788 FGIQRELCDLVRVSLLNAQRARFLYASGFLTVADLARANVAEV 830
Score = 244 bits (622), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 216/743 (29%), Positives = 326/743 (43%), Gaps = 152/743 (20%)
Query: 1533 GLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEI 1592
GLAVCW YY++L K+ H L S D +
Sbjct: 1885 GLAVCWGGRDAYYISLQKE--QKHPEISASLAPPSLDPAL-------------------- 1922
Query: 1593 MEKRDVRKFTWNMK--VQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLK 1650
VR+ W+++ +Q + K V I F + + L++ G S +
Sbjct: 1923 ----TVRERMWHLQSCLQKESDKDRTVIIYDF----IRSYKIFLQSCGISLE-------Q 1967
Query: 1651 DGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAA-----------------AAANRS 1693
D + W+L PD S PNL V L E S
Sbjct: 1968 SYEDPKVACWLLDPD---SMEPNLHSMVTSYLPHELPLLEGMETGQGIQSLGLNVTTEHS 2024
Query: 1694 GRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWG 1753
GR++ + C + L LL E L + +E+P LA +EL G
Sbjct: 2025 GRYRASVESVLIFSCMNQ----------LHSLLQKENLQDIFYKVEMPSQYCLALLELNG 2074
Query: 1754 IGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANV-LYGHLKLPIPEGHN 1812
IG C ++++Q KL +E +AY LAG FS +A DIA V L+ LKLP P+G
Sbjct: 2075 IGFSTAECESQKHIMQAKLDAIEMQAYQLAGHSFSFTSADDIAEVVLFLELKLP-PDGDM 2133
Query: 1813 K-----------------------GKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
K G++ ST K L+ L+ HP+ +I E R + +
Sbjct: 2134 KVQGSKKTLGSTRRGNEQMHKQRLGRRF-STSKDVLNKLKALHPLPGLILEWRRITNAIT 2192
Query: 1850 CTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM------- 1902
+ + R+ + ++ Q+ TATGR++ EPN+Q V E KM
Sbjct: 2193 KVIFPLQREKRLHPFLRMERIYP-VSQSHTATGRITFTEPNIQNVPRDFEIKMPTFVEES 2251
Query: 1903 ----------------SNEDIY----GGNAEVDHCK-------INARDFFIPSQENWILL 1935
N+ + G A+++ ++ R F+P ++L
Sbjct: 2252 PPSRALGKGLLPMGRGQNKKGWVRNPGRQAQMEKTSDRGMPFSVSMRHAFVPF-SGGLIL 2310
Query: 1936 AADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLI 1995
AADYSQ+ELR++AH S D LI +L+ DVF IAA W +SV R Q K++
Sbjct: 2311 AADYSQLELRILAHLSHDCRLIQVLNS-GADVFKSIAAEWKMVEPESVADDLRQQAKQIC 2369
Query: 1996 YGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGR 2055
YGI+YGMG +L EQ+ N+A I SFKS + G+ +L V +C + G+V+++ GR
Sbjct: 2370 YGIIYGMGAKSLGEQMGIKENDAACYIDSFKSKYTGINRFLRETVKNCERDGFVQTILGR 2429
Query: 2056 KRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI-------HSIIVGGVYK- 2107
+R+L IK N K+ A+RQA+N+ QGSAADI+KIA ++I HS ++
Sbjct: 2430 RRYLPGIKDNNFYRKAHAERQAINTTVQGSAADIVKIATVHIQKQLETFHSAFKSHSHRE 2489
Query: 2108 -----------PDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
P + F ++G +LQ+HDEL+ EV I + +++ MESA
Sbjct: 2490 RILQSDTTGLLPKRKVQGMFCPIRGGF-FILQLHDELLYEVAEEDIVQVAQIIKNEMESA 2548
Query: 2157 ALLLVPLLVKIQVGSTWGSLEPF 2179
L V L VK+++G++WG L+ F
Sbjct: 2549 IKLSVKLKVKVKIGASWGELKDF 2571
>gi|444727047|gb|ELW67555.1| DNA polymerase theta [Tupaia chinensis]
Length = 2536
Score = 581 bits (1498), Expect = e-162, Method: Compositional matrix adjust.
Identities = 323/805 (40%), Positives = 472/805 (58%), Gaps = 73/805 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 77 DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 136
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 137 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYVGSTSPTGHFSSLDI 196
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y T
Sbjct: 197 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI----TQ 252
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S+S + S +G+QIVGMSAT+PN+ +A WL A LY T+FRPVPL E +K+
Sbjct: 253 KSASCQADLVSP----LFNGVQIVGMSATLPNLDLIASWLNAELYHTDFRPVPLLETVKI 308
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DHIV LC E + + HSVL+FC S+K CE A +
Sbjct: 309 GNSIYDSSMKLVREFQPMLQVKG-DEDHIVSLCYETICDNHSVLLFCPSKKWCEKLADTI 367
Query: 800 SKFLKKFSINVHSSDS------EFIDIT-------SAIDALRRCPAGLDPVLEETLPSGV 846
++ N+H EF +T +D L+ P+GLD VL++T+P GV
Sbjct: 368 AREF----YNLHHQAEGLVKPPEFPPVTLEPKGLQEVMDQLKHLPSGLDSVLQKTVPWGV 423
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
A+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P +D
Sbjct: 424 AFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFSGRPLDVLT 483
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL-----SEDKNGMTH 961
Y+QM GRAGR G+DT GES+L+CK E K LL S P+ SCL E M
Sbjct: 484 YKQMVGRAGRKGVDTVGESILVCKISEKSKGTALLQGSLKPVCSCLRRHEGEEVTACMIR 543
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHRK 1011
AILE++ GG+ T +D+ Y CT L S K Q ++ Q+S++ WL +
Sbjct: 544 AILEIIVGGVASTPQDMQNYASCTFLAASMKEGQQEIERNQNSVQLGAIEACVMWLLENE 603
Query: 1012 FLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH+VYL
Sbjct: 604 FIQVAEVGDGTEGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYL 663
Query: 1067 STPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDST 1125
TP+ + DW ++ + +L + V VGV E +L R G K+ T
Sbjct: 664 ITPMFEDWTTIDWYRFFCLWEKLPISMKRVAELVGVEEGFLARCVKG-------KVVART 716
Query: 1126 KGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMV 1185
+ H + + + KRF+ +L+L L+ E P+ E+ + + RG +
Sbjct: 717 ERQH------------------RQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCNRGQI 758
Query: 1186 QALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1245
Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR
Sbjct: 759 QSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRAR 818
Query: 1246 ALYKAGLRTPLAIAEASISEIVKAL 1270
ALY +G T +A A+I+++ L
Sbjct: 819 ALYASGFLTVADLARANIADVEMVL 843
Score = 223 bits (567), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 200/708 (28%), Positives = 308/708 (43%), Gaps = 142/708 (20%)
Query: 1533 GLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEI 1592
GLAVCW YY +L ++ H I S + L P +K R +
Sbjct: 1908 GLAVCWGGRDAYYFSLQQE--QKHSE-----ISASLNPPPLDPGL---TVKDRLWHLQSC 1957
Query: 1593 MEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDG 1652
++K+ ++ + + IQ K + L+ + LE +D
Sbjct: 1958 LQKKSGKECSVIIYDFIQSYK-----------ILLLSCGISLE--------------QDF 1992
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAAN-RSGRWKNQMR---RAAHNGC 1708
D + W+L PD S P L V L E +G + H+G
Sbjct: 1993 EDPKVACWLLDPD---SKEPTLHSIVTSFLPHELPLLEGMETGEGIQSLGLNVNTEHSGR 2049
Query: 1709 CRRVAQTRALCSVLWKL---LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
R ++ + S + +L L E L + +E+P LA +EL GIG C +
Sbjct: 2050 YRASVESVLIFSCMTQLNSLLQKENLQDVFCKVEMPSQYCLALLELNGIGFSTAECESQK 2109
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
++Q KL +E +AY LAG FS ++ DIA VL+ LKLP P G K
Sbjct: 2110 QIMQAKLDAIETEAYQLAGHSFSFTSSDDIAEVLFLELKLP-PNGEMK------------ 2156
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
++ + K L T I S ++ + Q +T R++
Sbjct: 2157 ---------------NQGIKKTLGSTRRGIDSGRKLRLGRQ------------FSTRRIT 2189
Query: 1886 MEEPNLQCVEHMVEFKMS--------NEDIYGGNAEVDHCKI------------------ 1919
EPN+Q V E KM ++ + G + KI
Sbjct: 2190 FTEPNIQNVPRDFEIKMPTLVEESPPSQALGKGLLPMGRGKIKKGRRLNPEHQAHLEERA 2249
Query: 1920 ---------NARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
+ R F+P ++LAADYSQ+ELR++AH S D LI +L+ DVF
Sbjct: 2250 SDKGMPFSVSMRHAFVPF-PGGLILAADYSQLELRILAHLSHDHRLIQVLNT-GADVFRS 2307
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFP 2030
IAA W ++VG++ R Q K++ YGI+YGMG +L EQ+ N+A I SFKS +
Sbjct: 2308 IAAEWKMIEPETVGNELRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYT 2367
Query: 2031 GVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADII 2090
G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQA+N+ QGSAADI+
Sbjct: 2368 GINHFMRETVKNCKRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTTVQGSAADIV 2427
Query: 2091 KIAMINIHSII--VGGVYK-----------------PDSSLAANFQMLKGRCRLLLQVHD 2131
K+A +NI + + +K P L F ++G +LQ+HD
Sbjct: 2428 KVATVNIQKQLETLRSTFKSHGHRESMLRRDKTGLLPKRKLQGMFCPIRGGF-FILQLHD 2486
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
EL+ EV + +V+ ME+A L V L VK+++G++W L F
Sbjct: 2487 ELLYEVAEEDAVQVAQIVKNEMENAIKLSVKLKVKVKIGASWAELRDF 2534
>gi|449662053|ref|XP_002164745.2| PREDICTED: DNA polymerase theta-like [Hydra magnipapillata]
Length = 1898
Score = 572 bits (1473), Expect = e-159, Method: Compositional matrix adjust.
Identities = 327/831 (39%), Positives = 485/831 (58%), Gaps = 80/831 (9%)
Query: 502 CLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEIL 561
C L LP+ + YKK GI L+ WQ ECL L+ NLVY A TSAGK+ VAE+L
Sbjct: 121 CSLLDFDLPTTVIEKYKKNGIESLFLWQKECLLTGKALEGGNLVYSAPTSAGKTLVAELL 180
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAV 621
ML+R++ T K + +LP+VS+ EK L E G + + GN+ +AV
Sbjct: 181 MLKRVLKTRKKVIYILPFVSVAREKVYSLRDQFEDSGITIGGFMGNENTAGGLNTVDIAV 240
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS 681
CTIEKANSL+N+++E ++ ++ +V+DE+HM+ D RGYLLELLLTK+++
Sbjct: 241 CTIEKANSLINKLMESKKILDLCCVVVDEMHMIGDVGRGYLLELLLTKIKFL-------- 292
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN 741
T+S A+ +QI+GMSAT+PN+ +A WL+A LY TNFRPVPL E+IKVGN
Sbjct: 293 -------TASNDAE----IQIIGMSATLPNLDMLAKWLKADLYFTNFRPVPLTEHIKVGN 341
Query: 742 AIYSKKMDVVRTILTAANLGG--KDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
I + V + +N GG D + I+ LC E + EG+SVLIFC ++ CE + +
Sbjct: 342 HILNSSGKEVSIV---SNYGGIKGDEEGIIPLCVETIVEGNSVLIFCPTKNWCEKLSETI 398
Query: 800 SKFLKKFSINVH---SSDSEF----------IDITSAIDALRRCPAGLDPVLEETLPSGV 846
S++ + + + SS+S + I I+ L+R GLD +LE+ + GV
Sbjct: 399 SEYFLQNPMGISFKTSSESNHKKSGFPLISKVLIEDVIEQLQRTQVGLDKMLEKVVRQGV 458
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
AYHHAGLT++ER+++E +R+G++R+L ATSTL++GVNLPARRVI R P ++
Sbjct: 459 AYHHAGLTIDERDILEGAFRRGVLRILVATSTLSSGVNLPARRVIIRSPIFHGQLLEPMI 518
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSC-LSEDKNG----MTH 961
Y+QMAGRAGR +D++GES+LICKP E +K + LL P++SC L +D G +
Sbjct: 519 YKQMAGRAGRKNVDSEGESILICKPTEKQKGLSLLTSDLVPVYSCLLRKDGEGNSKTLKR 578
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLLN---STKPFQDVVKSAQDSLRWLCHRKFLEW--- 1015
A+LEV+A G+ E + Y + T L+ S +D +S D++++L +F+
Sbjct: 579 ALLEVIAAGVASQPEHVQLYAQSTYLHVCLSAISDKDPDQSISDTMKFLIDNEFIRLEKV 638
Query: 1016 -NEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE- 1073
NE + Y T LG A SSL P+E+L+VL +L AR+ FVL ++LH++Y TPI ++
Sbjct: 639 NNEQEENYFATQLGSATLASSLSPDEALLVLGELREARKRFVLENELHIIYQVTPIYLQD 698
Query: 1074 --VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGK 1131
E DW++YY + +L A ++VG VGV E +L R
Sbjct: 699 QWPELDWQIYYNIWEKLPAEFKAVGELVGVQERFLARA---------------------- 736
Query: 1132 LEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQEN 1191
+R G+ N + + LR+ KRFY ALIL LV E P+ V +K+ RG++Q+LQ +
Sbjct: 737 --FRNGVQQKNE-NQMRVLRIHKRFYAALILQDLVNEVPLSHVSNRYKINRGLLQSLQNS 793
Query: 1192 AGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAG 1251
A FA MV+VFC++LGW LE L+ +FQ+R+SFGV E+ L IP + G AR Y+ G
Sbjct: 794 ASTFAGMVTVFCQKLGWSCLELLLEQFQSRLSFGVSRELCNLVRIPLLSGFMARTFYEKG 853
Query: 1252 LRTPLAIAEASISEIVKALFESSSWIAEAQRRV-QLGVAKKIKNGARKIVL 1301
+T + AS+ +I + L ++ + E+++ + +L K + AR I L
Sbjct: 854 YQTVSTLVSASVEDIARILRDAIPF--ESKKSLNKLSSQSKRRRNARNICL 902
Score = 249 bits (635), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 208/702 (29%), Positives = 340/702 (48%), Gaps = 122/702 (17%)
Query: 1531 IHGLAVCWENSPVYYVNLPKDLWSD---HRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWK 1587
I G+AVCW + +++NL ++ H KDR S+ K++L + Q ++I
Sbjct: 1262 ITGVAVCWGSKDAFFLNLGSSEYTGNNFHYAKDRI----SAFKHLLKSKTQCQLI----- 1312
Query: 1588 RIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPV 1647
+++K Q+++L LVG+ LL+P+
Sbjct: 1313 --------------AFDIKEQLKLLYQ------------LVGS------------LLNPI 1334
Query: 1648 HLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKN--QMRRAAH 1705
+L +D + W+L P++ NL + L+ E +G +R A
Sbjct: 1335 NL---LDPKVAHWMLCPNEREK---NLYALANQFLNKEFIGFIEGTGGLGQGIDLRTCA- 1387
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
C L + L E+LI++ ++IE+P + L +E+ GIG C + +
Sbjct: 1388 ---CIEAVTVYHLMEEMELRLKREDLIKSFVDIEMPTIRTLLVIEINGIGFSDIECEKLK 1444
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG-----HNK------- 1813
+L+ KL ++++ Y L+G FSL + AD+A VL+ L LP P G H +
Sbjct: 1445 EILKGKLDSIQQECYKLSGSVFSLSSPADVARVLFTELNLP-PGGEYNLNHQRQMRSKVT 1503
Query: 1814 GKQHPS--TDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS-ICSLARISMSTQKYTL 1870
GK+ S T K L+ L H + +I E R + N TL + + R S+ +
Sbjct: 1504 GKKLKSICTSKEVLEKLSKFHALPKLILEWRKI----NSTLTKFVYPVQRRKRSSDVLQM 1559
Query: 1871 HGHWLQT--STATGRLSMEEPNLQCVEHMVEFKMSN------------------------ 1904
H + + T TGR++ EPNLQ V + K+S+
Sbjct: 1560 HRIFTEAIYRTCTGRVTFSEPNLQNVPKEFDIKLSSLVVKSPPHQITGNKKHKRQLVSST 1619
Query: 1905 -------EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
+D + G++ + ++ R F+P +++AADY Q+ELR++AH S+D LI
Sbjct: 1620 RPLLSQQKDKHIGSSTTEMFTVSMRSTFVPFSSG-VMVAADYEQLELRIIAHMSQDQILI 1678
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
L++ GDVF IAA + V + +R K++ YGI+YG+G LS QL N+
Sbjct: 1679 KTLNES-GDVFKSIAAEINHINVVDVTTVQRQHAKQICYGIIYGIGIKALSHQLGVEEND 1737
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
A E ++ FK+ F GV ++ + G+V++L GRKR+L I +KS A+RQA
Sbjct: 1738 ASEYMEKFKNRFKGVKRFIQNTIEEARANGFVKTLGGRKRYLPAINSKITNDKSHAERQA 1797
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPD--SSLAANFQMLKGRCRLLLQVHDELVL 2135
VN+ QGSAAD++KIAM NI I + ++ + LA Q KG L+LQ+HDEL+
Sbjct: 1798 VNTTIQGSAADLVKIAMNNI-DIKLNKIFGNSCFNKLAEKSQP-KG-AYLVLQIHDELLY 1854
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
EV+ + + L+++ MESA +L V + VK+++GS+WG+L+
Sbjct: 1855 EVNKENVDIVIKLIRREMESAIILTVKMPVKVKIGSSWGTLK 1896
>gi|326912829|ref|XP_003202748.1| PREDICTED: DNA polymerase theta-like [Meleagris gallopavo]
Length = 2152
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/797 (39%), Positives = 464/797 (58%), Gaps = 86/797 (10%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L+SW LP + Y G+ +++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 55 DKLLLASWGLPKAVLEKYHNLGVVQMFEWQAECLMLGQVLEGKNLVYSAPTSAGKTLVAE 114
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ T K AL +LP+VS+ EK +L+ L + + V Y G+ V
Sbjct: 115 LLILKRVLETRKKALFILPFVSVAKEKKCYLQALFQEVDVRVEGYMGSISPAGRFSSLDV 174
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIEKAN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+RY T
Sbjct: 175 AVCTIEKANGLINRLIEENQMDSLGVVVVDELHMLGDSHRGYLLELLLTKVRYI----TE 230
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
++ + TS G G+Q+VGMSAT+PN+ +A WL A LY T+FRPVPL+E++K+
Sbjct: 231 KAAKRKAKMTSPGFG----GIQVVGMSATLPNLGLLASWLDAELYCTDFRPVPLKEWVKI 286
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN IY M++VR L G D DH+V LC E V +GHSVL+FC S+ CE A +
Sbjct: 287 GNNIYDSSMNLVREFQPKLQLKG-DEDHVVSLCYETVCDGHSVLLFCPSKNWCEKLADII 345
Query: 800 SKFL----------KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYH 849
++ K S++ D E ID +D L+R +GLD VL+ TLP GVA+H
Sbjct: 346 AREFYSLQQAESSAKNSSLSPVVVDREGID--EVLDQLKRSLSGLDSVLQRTLPWGVAFH 403
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
HAGLT +ER+V+E +R+G++RVL ATSTL++GVNLPARRVI R P G +D Y+Q
Sbjct: 404 HAGLTFDERDVIEGAFRRGVIRVLAATSTLSSGVNLPARRVIIRTPMFGGTLLDVLTYKQ 463
Query: 910 MAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAG 969
MAGRAGR G+DT EE + G + M AILE++
Sbjct: 464 MAGRAGRKGVDT----------EESPRREG-------------EGVASSMKRAILEIIVS 500
Query: 970 GIVQTAEDIHRYVRCTLLNST--------KPFQDVVKSA--QDSLRWLCHRKFLEW---- 1015
G+ T +D+ Y CTLL S+ + QD V+ + + WL +F++
Sbjct: 501 GVASTPDDVQTYASCTLLASSLKENKRENEKEQDKVQKGPIEACIAWLLENEFIQILECA 560
Query: 1016 -NEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE- 1073
++ K++ T LG A SSL P E++ + DL RA + FVL +DLH+VYL TP+ +
Sbjct: 561 NDKKAKIFHPTHLGSATLSSSLSPTEAMEIFSDLQRAMKSFVLENDLHIVYLVTPLYEDW 620
Query: 1074 VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLE 1133
DW ++ + +L A + V VG+ E +L R G +I++K +
Sbjct: 621 TTIDWYQFFCLWEKLPASMKRVAELVGIEEGFLARSVKG---KITAKTEK---------Q 668
Query: 1134 YRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAG 1193
YR + + KRF+ +L L L+ E P+ ++ + + +RG +Q+LQ++A
Sbjct: 669 YR-------------QMAIHKRFFTSLALLDLISEVPLKDMTKKYGCSRGQLQSLQQSAA 715
Query: 1194 RFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLR 1253
+A MV+VFC RLGW+++E L+++FQ+R++FGV E+ +L + + RAR LY AG
Sbjct: 716 TYAGMVTVFCNRLGWHNMELLLSQFQSRLTFGVHRELCDLVRVSLLNAQRARMLYNAGFV 775
Query: 1254 TPLAIAEASISEIVKAL 1270
T +A+AS ++ AL
Sbjct: 776 TVADLAKASPGDVATAL 792
Score = 45.8 bits (107), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
+LQ+HDEL+ EV + + +V+ ME+A L V L VK+++G +WG L+ +
Sbjct: 2096 FILQLHDELLYEVAEDDVIQVAQIVKHEMENAVKLSVKLNVKVKIGPSWGDLQDLE 2151
>gi|196005441|ref|XP_002112587.1| hypothetical protein TRIADDRAFT_25163 [Trichoplax adhaerens]
gi|190584628|gb|EDV24697.1| hypothetical protein TRIADDRAFT_25163, partial [Trichoplax adhaerens]
Length = 1492
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/800 (39%), Positives = 481/800 (60%), Gaps = 75/800 (9%)
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILML 563
LSSW LP + Y+ GI+K++ WQV+CL + VL NLVY A TSAGK+ +AE+LML
Sbjct: 1 LSSWDLPPAVLENYRSVGITKMFEWQVQCLTLGNVLNGGNLVYAAPTSAGKTLIAELLML 60
Query: 564 RRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCT 623
+R++ + + ALL+LPYVS+ EK +L+ L E G V + G Q + +A+CT
Sbjct: 61 KRVLESKRKALLILPYVSVVREKTAYLQRLFESTGIRVGGFMGKQAPSGGFDNIDIAICT 120
Query: 624 IEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSS 683
IEKANSL+NR++EE +L ++GIIVIDE+H++ D RGYLLELLL K+ Y + + +S+
Sbjct: 121 IEKANSLINRLMEERQLEQLGIIVIDEMHVIGDPYRGYLLELLLVKVLYWTSK--AKTST 178
Query: 684 GENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAI 743
EN TS +QI+GMSAT+PN+ +A W+ +Y ++FRPVPL + +++G I
Sbjct: 179 TENHSTS---------IQIIGMSATLPNLHVMAKWINGKVYNSSFRPVPLTQMVQIGKTI 229
Query: 744 YSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV-SKF 802
Y+ +M +R I + I ++C E V H VLIFC ++ CE A+++ S+F
Sbjct: 230 YNHQMQPIRNI--------DSENEITQICLETVCHAHGVLIFCPTKNHCEKLAQNLASQF 281
Query: 803 LKKFSI-------NVHSSDSEFIDIT-----SAIDALRRCPAGLDPVLEETLPSGVAYHH 850
+ + ++++S +++ + + L+ P GLDPVLE T+ G+A+HH
Sbjct: 282 IPHIDYLDEPVVPSSYATESNRLNLNRTKLLTTLAQLKSTPVGLDPVLESTITKGIAFHH 341
Query: 851 AGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQM 910
AGLT+EER+++E +R G++ V+ ATSTL++GVNLPARRVI R P ID YRQM
Sbjct: 342 AGLTIEERDIIEAAFRSGIILVIIATSTLSSGVNLPARRVIIRTPIFYGRLIDVITYRQM 401
Query: 911 AGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS------EDKNGMTHAIL 964
GRAGR GID GES+LIC E+ ++ L+ + P+ SC S ED M A+L
Sbjct: 402 VGRAGRKGIDDIGESILICNNREMDRVSKLVTATPDPVISCFSKCKNPDEDNGMMKRALL 461
Query: 965 EVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKL--- 1021
EV+ G +T D Y+ CTLL ++ D+ S ++L +FLE NE K
Sbjct: 462 EVINSGFAKTFTDTVLYISCTLLAASTE-ADMSLSLDNALE--STLQFLEENEFIKRQAS 518
Query: 1022 --YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE---P 1076
Y T LG A S+L P+++LIV DL +AR+ FVL ++LH++Y TPIN+ +
Sbjct: 519 LQYYATKLGEATVASALSPDQALIVFADLQKARKSFVLENELHIIYQVTPINLNDQLKGI 578
Query: 1077 DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
DW Y + +L + VG +GV+E YL TKG G+L R
Sbjct: 579 DWYNYLRIWEKLPDDMKYVGRIIGVAESYL------------------TKGARGRLPQR- 619
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
++ TL V RFY AL+L+ L+ E P++++ + ++RG +Q+LQ +A F+
Sbjct: 620 ------TIAQRNTLSVHLRFYTALVLNALIHEVPLIDISNYYGLSRGQLQSLQNSAATFS 673
Query: 1197 SMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPL 1256
MV++FC++L W++L L+ +FQ+R++FG+ E+ +L I + G+RARALY AGL+T +
Sbjct: 674 GMVTIFCKKLCWHNLHLLLEQFQSRLAFGIERELCDLVRISLLNGTRARALYNAGLQTVV 733
Query: 1257 AIAEASISEIVKALFESSSW 1276
AI+++S + I + L++++ +
Sbjct: 734 AISKSSSTIIEQILYKATPF 753
Score = 260 bits (664), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 212/736 (28%), Positives = 327/736 (44%), Gaps = 144/736 (19%)
Query: 1481 DRACNKGPINAINASGG---FDCFLDRWEATHEFYFDIHYDKHSEANSGV---------- 1527
D+ + I+ +G FD F++ W + + + S+ + G+
Sbjct: 854 DKNAEDSCFSIIDVTGSKELFDVFINEWRHQRAYTLSLACEPKSQLHKGIGSNIRYRPSQ 913
Query: 1528 -----------LFE----IHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNV 1572
+F+ + G+A+CW Y+VNL D N
Sbjct: 914 TQSDLSSSSSIIFDDRYIVVGIAICWGGFDSYFVNL-------------------GDCNT 954
Query: 1573 LTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVL-KHAAVSIQRFGGLNLVGTS 1631
L + + +E K +N+K Q ++L +H V I+
Sbjct: 955 LQDD------------VANNIENSSAIKIAYNLKEQYKILTRHLQVEIK----------- 991
Query: 1632 LGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAA---- 1687
G+S+ P K GI W+L D+ + + L+ EAA
Sbjct: 992 ------GTSY---DP---KIGI------WLL---DQDAHEKTFHAIISNYLADEAALLDC 1030
Query: 1688 -----AAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPL 1742
N G N C V L SV+ +L EL + IE+P
Sbjct: 1031 VIGTCTDGNGIGLHYNSQTSGRRRACIESVL-VHKLHSVVEAMLKERELYKLYSEIEMPT 1089
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
+ L +EL GIG M+ C Q LQ +L Y+E+ AY +AG F L + DIA+VLY
Sbjct: 1090 IRTLCWLELDGIGFCMDECQQQIERLQYRLHYIEEMAYRIAGRSFQLTSPTDIAHVLYTE 1149
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L +T K L L HP+ ++ E R + L TL + ++
Sbjct: 1150 L---------------NTCKDVLQKLSQIHPLPALVLEWRRINSALTKTLYPLKRYSKYC 1194
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Y ++ Q TATGR+S+ +PNLQ + + D K+
Sbjct: 1195 HKSKTYRVYPT-CQMHTATGRISISDPNLQNIP----------------KDFDIAKMVRM 1237
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
I + ILL+ADYSQ+ELRL+AH S+D L +L+ GDVF IA+ W D
Sbjct: 1238 RNIIGCTNDTILLSADYSQLELRLIAHLSEDKQLSRVLNDG-GDVFKAIASEWLCIPTDH 1296
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V ++R + K++ YGI+YGM P L EQ+ +A + +FKS + G+A ++ + S
Sbjct: 1297 VSDEQRQRAKQMCYGIIYGMTPMALGEQMKVPEEQAATFMHTFKSRYNGIAKFIEKTLVS 1356
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
C ++GYV ++ RKR L I+ N + +S A+RQA+N+ QGSAAD++KIAMINIH I
Sbjct: 1357 CRREGYVSTIMNRKRLLPNIRSTNARLRSHAERQAINTTVQGSAADLVKIAMINIHKRI- 1415
Query: 2103 GGVYKPDSSLA--ANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLL 2160
D A AN + + + +LQ+HDEL+ E+ + ++ +V++ ME+A L
Sbjct: 1416 ------DEMCANRANRDNAEWKPKFVLQMHDELLFEIKANELESVSLIVKQEMENALKLR 1469
Query: 2161 VPLLVKIQVGSTWGSL 2176
V L VKI+ G WG L
Sbjct: 1470 VKLEVKIKTGKYWGEL 1485
>gi|321475795|gb|EFX86757.1| hypothetical protein DAPPUDRAFT_312857 [Daphnia pulex]
Length = 1781
Score = 562 bits (1448), Expect = e-156, Method: Compositional matrix adjust.
Identities = 340/874 (38%), Positives = 488/874 (55%), Gaps = 80/874 (9%)
Query: 459 LDISSQGIDSITSDSPTNVIKKPVGNEKSD-EAGTPSSSGMLKDCLDLSSW-LPSEICSI 516
LD + + + SP + PV N + + SS +LK L L +W LPS +
Sbjct: 111 LDKKTNSLSASVHSSPLSC-STPVANSAASLRKASLRSSSILK--LHLQNWGLPSAVVQK 167
Query: 517 YKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLV 576
Y ++ I+ L+PWQV+CL VL NL+Y A TS+GK+ V+E+LML+ ++ K AL +
Sbjct: 168 YAEKKITTLFPWQVDCLQTGKVLVGGNLIYSAPTSSGKTLVSELLMLKTVVDLKKKALYI 227
Query: 577 LPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLE 636
LP+V++ EK L+ + E +G V S+ G+ K+ +A+CTIEKANSLVNR++E
Sbjct: 228 LPFVAVAREKTRFLKSVTEDVGIRVESFAGSSSPPGGLKNCDIAICTIEKANSLVNRLIE 287
Query: 637 EGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADP 696
+G L ++GI+V+DELH++ D +RGYLLELLLTK+ YAA T SG P
Sbjct: 288 DGSLDQLGIVVVDELHIIGDSHRGYLLELLLTKILYAA--------------TRSGSRSP 333
Query: 697 AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILT 756
+QIVGMSAT+P++ +A WL+A LY+TNFRP+ L+E+IK+G I ++R I
Sbjct: 334 ---IQIVGMSATLPSLEILAKWLRADLYQTNFRPIALKEHIKIGTDICHPDFRLIRKI-D 389
Query: 757 AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSE 816
A L D +H++ LC E + +G+SVLIFC ++ CE A+++S + S
Sbjct: 390 PARLVPNDIEHLIYLCLETMLDGNSVLIFCPTKNWCEKMAQNISGEFFNLGSSATSDYGA 449
Query: 817 FID-------ITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGL 869
+ + ++ L+ PAGLDPVL +T+ GVA+HHAGLT EERE +E +R G+
Sbjct: 450 ILRKQLKGDLLAQVLERLKATPAGLDPVLGQTIRFGVAFHHAGLTTEERENIEAAFRHGV 509
Query: 870 VRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLIC 929
+RVL ATSTL++GVNLPARRVI R P +D YRQM GRAGR G+DT G+S LIC
Sbjct: 510 IRVLIATSTLSSGVNLPARRVIIRTPIFHGTVMDPLVYRQMIGRAGRFGVDTDGDSYLIC 569
Query: 930 KPEEVKKIMGLLNESCPPLHSCLSEDK-----------NGMTHAILEVVAGGIVQTAEDI 978
+P E ++ + N PPL SCL D + M A+LEV+A G T ED+
Sbjct: 570 QPSEKHQVQRMFNAVPPPLKSCLLLDSTPSTDLSTTVTSSMKRAMLEVIATGSASTEEDL 629
Query: 979 HRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLE---WNEDTKLYSTTPLGRAAFGSS 1035
Y CTLL D + Q + WL +F+ +E + + T LG A SS
Sbjct: 630 KLYASCTLLALLNDVPDA--AIQACVAWLVSNEFIRRQTVDEGKERLTPTQLGLACLASS 687
Query: 1036 LCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE---VEPDWELYYERFLELSALD 1092
L P+ESL++L++L AR G +L SDLHLVY TP V + DW Y + EL+
Sbjct: 688 LSPDESLVLLNELKTARRGLILDSDLHLVYQITPTYVSDQMTQIDWLHYLTLWEELNESQ 747
Query: 1093 QSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRV 1152
+ VG VGV E +L+R G + + ++ + +
Sbjct: 748 KRVGEAVGVEERFLIRAMKGTVTTTAPR-------------------------QSRQMAI 782
Query: 1153 CKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLE 1212
+RFY AL L L+ E + V T+K+ +G +Q+LQ+ FA MV++FC RLGW L
Sbjct: 783 HRRFYTALALHELMNEVRLANVARTYKMNKGTLQSLQQQTATFAGMVTIFCHRLGWNTLY 842
Query: 1213 GLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL-- 1270
L+ FQ+R+ FGV+ E+ +L +P + AR LY AGL A+A AS I L
Sbjct: 843 VLLEHFQSRLLFGVQLELCDLMRLPSMLSHTARLLYDAGLTNVSAVATASPENIEVLLKN 902
Query: 1271 ---FESSSWIAEAQRRVQLGV-AKKIKNGARKIV 1300
F+S+ EA++ + V A + + ARKI+
Sbjct: 903 ACPFKSAKETEEAKKLGETDVDAHALVSEARKIL 936
Score = 258 bits (660), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 283/555 (50%), Gaps = 77/555 (13%)
Query: 1643 LLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRR 1702
LL+ + +D +D+C W+L P + S P L K S + + GR K
Sbjct: 1285 LLNEMLFRD-VDLC--QWLLEPSNSSVSLPKLSK----MYSQQGSPTKMYRGREK----- 1332
Query: 1703 AAHNGCCRRVAQTRALCSVLWKL---LVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
+ CC AL + +L L EEL++ +++E+P+V + ME GI D
Sbjct: 1333 -ILHECC-------ALLDIFHQLKQRLSKEELLQPFVDVEMPMVATMLRMEQIGIAFDRS 1384
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHP- 1818
C +L+ L+ LE+ A+ LAG FSL + +++ ++ L L I E + + +P
Sbjct: 1385 NCELILQILRNHLKMLEEAAHRLAGRSFSLTSTKEVSKIV-ASLNLCIEEKNPQSFINPL 1443
Query: 1819 -------STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLH 1871
S K L L HP+ V+ E R ++ ++ IC L Q T H
Sbjct: 1444 KKKFQPLSVSKASLIKLGRIHPLPRVVVEFRKVSAIIQTI---ICPL------LQASTFH 1494
Query: 1872 GHWLQT-------STATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDF 1924
++ ATGR+++ +PNLQ + F +S D IN R
Sbjct: 1495 VSGVERIAGECEFRNATGRVNIVQPNLQHIPR--PFSLS-----------DGRMINVRSA 1541
Query: 1925 FIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVG 1984
F + LL+ADYSQ+ELR++AH S+D L +LSKP+GDVF I + W + ++ V
Sbjct: 1542 F-HAATGTTLLSADYSQLELRILAHLSEDTGLCSILSKPNGDVFRGIVSVWKKKKQEDVT 1600
Query: 1985 SQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCH 2044
ER Q K++ YGI+YGMG +L+EQL S EA+ + SF S++P + ++ ++ C
Sbjct: 1601 DDERQQAKQICYGIVYGMGCKSLAEQLEVSEEEAQLFVDSFHSTYPNIQKFITNTINMCR 1660
Query: 2045 QKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGG 2104
KG+V +L GR+RFL I N ++++A+RQAVN+ QGSAAD++K A+I +
Sbjct: 1661 SKGFVITLLGRRRFLPSINSNNAAQRAQAERQAVNTKIQGSAADLVKTAVILL------- 1713
Query: 2105 VYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLL 2164
+ SL L+ Q+HDEL+ E+ + ++ A +V+ CME+A + + +
Sbjct: 1714 ----NRSLKEKL----SDVHLVHQIHDELLFEIPTNCVERAARVVRHCMETAIPMKIRIP 1765
Query: 2165 VKIQVGSTWGSLEPF 2179
V I+ G TWG++EP+
Sbjct: 1766 VAIKTGKTWGTMEPY 1780
>gi|413916520|gb|AFW56452.1| hypothetical protein ZEAMMB73_683344, partial [Zea mays]
Length = 384
Score = 561 bits (1446), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/339 (77%), Positives = 299/339 (88%), Gaps = 2/339 (0%)
Query: 707 ATMPNV--AAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKD 764
AT+ +V ++D AALY+T+FRPVPLEE+IKVGN I+ K M+VVR + A+ GGKD
Sbjct: 33 ATLSSVLDPGISDTKLAALYQTDFRPVPLEEFIKVGNQIFDKDMNVVRVLPKVADHGGKD 92
Query: 765 PDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAI 824
PDHIVELC+EVV +GHSVL+FCSSRKGCESTARHV+KFLK S+ SEF D +AI
Sbjct: 93 PDHIVELCNEVVLQGHSVLLFCSSRKGCESTARHVAKFLKLPSVGTTDVSSEFSDAAAAI 152
Query: 825 DALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVN 884
+ALRRCPAGLDP+L ETLP GVAYHHAGLTVEERE+VE+CYRKGLVRVLTATSTLAAGVN
Sbjct: 153 EALRRCPAGLDPILGETLPFGVAYHHAGLTVEEREIVESCYRKGLVRVLTATSTLAAGVN 212
Query: 885 LPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNES 944
LPARRVIFRQP+IGRDFIDGTRYRQMAGRAGRTGIDTKGES+L+C+PEEVK++ G++ +
Sbjct: 213 LPARRVIFRQPKIGRDFIDGTRYRQMAGRAGRTGIDTKGESILVCRPEEVKRVTGIIRSN 272
Query: 945 CPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSL 1004
CPPL SCLSEDKNGMTHAI+EVVAGGIVQTA DIHRYVRCTLLNST+PF DVVKSAQDSL
Sbjct: 273 CPPLESCLSEDKNGMTHAIMEVVAGGIVQTANDIHRYVRCTLLNSTRPFDDVVKSAQDSL 332
Query: 1005 RWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLI 1043
RWLCH+ FLEWN +TK+YS TPLGRAAFGSSL PEESL+
Sbjct: 333 RWLCHKSFLEWNHETKIYSATPLGRAAFGSSLNPEESLV 371
>gi|443695787|gb|ELT96621.1| hypothetical protein CAPTEDRAFT_226809 [Capitella teleta]
Length = 1818
Score = 558 bits (1438), Expect = e-155, Method: Compositional matrix adjust.
Identities = 315/790 (39%), Positives = 449/790 (56%), Gaps = 101/790 (12%)
Query: 543 NLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVR 602
NLVY A TSAGK+ VAE+LML+R + T + A+ +LP+VS+ EK +L+ + + G V
Sbjct: 28 NLVYSAPTSAGKTMVAELLMLKRFLRTKRKAIFILPFVSVVREKVHYLQDMFQDAGVRVD 87
Query: 603 SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
+ G Q K +AVCTIEKANSL+NR++EE ++++G +V+DELHMV D RGYL
Sbjct: 88 GFMGGQNPAGGLKMVDIAVCTIEKANSLINRLMEEREMAQLGCLVVDELHMVGDAQRGYL 147
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAA 722
LELLLTK+R+ + + A +Q++GMSAT+PN+A +A WL A
Sbjct: 148 LELLLTKVRFLSQQ--------------------AAEVQLIGMSATLPNLALLAKWLSAD 187
Query: 723 LYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSV 782
LY TNFRPVPL E IK+G++I + VVR + L G D D ++ LC E +Q+G
Sbjct: 188 LYSTNFRPVPLTEMIKIGSSICDSSLAVVRELSPVQGLSG-DEDQVISLCLETIQQG--- 243
Query: 783 LIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETL 842
+I + D + + + ++ L+R P G+D VL T+
Sbjct: 244 ------------------------AIPI---DLDAVKVEDVLEQLKRSPVGVDHVLGRTV 276
Query: 843 PSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFI 902
GVAYHHAGLT +ER+++E +R+G +RVL ATSTL++GVNLPARRVI R P D I
Sbjct: 277 AMGVAYHHAGLTFDERDIIEGGFRRGALRVLVATSTLSSGVNLPARRVIIRTPTFHGDVI 336
Query: 903 DGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSED---KNGM 959
+ Y+QM+GRAGRTG+DT GES+L+CKP E + M L+ P++SCL+ M
Sbjct: 337 ETLTYKQMSGRAGRTGVDTAGESILVCKPSEKARAMKLVTSELTPVNSCLASRGSLSGSM 396
Query: 960 THAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDT 1019
AILEVV G+ T+E + RY +CTLL ++ D S ++ + +L +F+ D+
Sbjct: 397 KRAILEVVVSGVAATSESVRRYAQCTLLAASMEEGDEDDSIEECIAFLLQSEFISTQGDS 456
Query: 1020 K---LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI---NVE 1073
LY TPLG A SSL P+E L V +L +AR FVL +DLHLVY+ TPI N
Sbjct: 457 TDGLLYHATPLGSAVLSSSLAPDEGLAVFAELQKARRCFVLENDLHLVYIVTPIYMCNSL 516
Query: 1074 VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHG-APMRISSKLRDSTKGLHGKL 1132
DW Y + LS +SV + VGV E +L R G P + S ++R
Sbjct: 517 GNIDWYQYLRMWEALSPGFRSVSDLVGVKESFLSRAVQGRLPTKTSEQIR---------- 566
Query: 1133 EYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENA 1192
TL++ KRFY AL L LV E P++EV +K +G +Q+LQ+ A
Sbjct: 567 ----------------TLQIHKRFYTALALHDLVNEVPLIEVAAEYKCTKGTLQSLQQAA 610
Query: 1193 GRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGL 1252
FA M++VFC+RLGW+ L L+ FQ+R++FGV+ E+V+L + + G RAR L+ +GL
Sbjct: 611 ATFAGMITVFCQRLGWHHLAVLLEDFQSRLTFGVQRELVDLVRVSLLTGVRARTLFDSGL 670
Query: 1253 RTPLAIAEASISEIVKAL-----FES-------SSWIAEAQRRVQLGVAKKIKNGARKIV 1300
+T +A A ++ + L F+S + W EAQ R + GV + G +
Sbjct: 671 QTVAQLANAEPRQVQRLLAKATPFQSKKKFEGDTEW--EAQERRRKGVCGILGAGGEALT 728
Query: 1301 LEKAEEARIA 1310
+A + IA
Sbjct: 729 DAEAAQVVIA 738
Score = 248 bits (633), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 221/784 (28%), Positives = 349/784 (44%), Gaps = 152/784 (19%)
Query: 1498 FDCFLDRWEATHEFYFDIHYDKHSEANS--------GVLFEIHGLAVCWENSPVYYVNLP 1549
F F+ W + +F + D + + GVL IHG+AV WEN Y
Sbjct: 1088 FKQFVMEWRSQPQFSLSVACDLLTPNDPKGDHLVCRGVL--IHGVAVSWENRDSY----- 1140
Query: 1550 KDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQI 1609
F+ SD++ P+ +E + + +R+ +K+ +
Sbjct: 1141 ------------FVSLSGSDEDA-DPDDSMEA--------PPLDPRLSLRQRLSAVKLCL 1179
Query: 1610 QVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERS 1669
Q L + G+ GS +D + W+L D+ +
Sbjct: 1180 QSTGSKVTCFDAKSTLRFLSEGCGVSAKGSF------------MDPKVADWLL---DQGA 1224
Query: 1670 SNPNLEKEVKKRLSSEAAAAANRSGRWKN-------QMRRAAHNGCCRRVAQTRALCSVL 1722
NL + VK EA G Q + C R + S L
Sbjct: 1225 KVKNLHRLVKTFAPDEAHLLNGLGGGVGYGSMGLCPQNPGSGRMRACTESVLARKVMSPL 1284
Query: 1723 WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTL 1782
LL L+ + + +E+P V +L+ MEL G+G E + R L+Q L LE++AY L
Sbjct: 1285 RVLLEEAGLMTSFVEVEMPTVALLSRMELNGMGFSAEESHRQRCLMQDTLVLLEERAYRL 1344
Query: 1783 AGMKFSLYTAADIANVLYGHLKLPIPEGHN--------KGKQHP-STDKHCLDLLRHEHP 1833
A +F L +AAD+A VL+ LKLP P G +G++ ST K L+ LR HP
Sbjct: 1345 AKRQFQLTSAADVAQVLFIELKLP-PNGDATTPRPRAVRGRRPAFSTSKEVLERLRSLHP 1403
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL---HGHWLQTSTATGR------- 1883
+ VI E R L+ L+ + L R ++ +++ + HG T TATGR
Sbjct: 1404 LPGVILEWRRLSSSLSKV---VFPLQREAVRSERLCMLRIHG-VCDTHTATGRPHGVHAQ 1459
Query: 1884 ----LSMEEP---------------------------------------NLQCVEHM--V 1898
+++P N+ +H+ V
Sbjct: 1460 QLQDFRLQQPAAEVAGQLAAAVLALQLHESPTRQMHIQHHPAHGVVAKGNVPQTQHVLHV 1519
Query: 1899 EFKMSNEDIYGGNAEVDHCK---INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+ ++ + I G+ C + RD FIP +LLAADYSQ+ELR++AH S+D
Sbjct: 1520 QLRLVGDVIAEGSDAAASCSPSTLRMRDAFIPF-TGGLLLAADYSQLELRIIAHLSQDRK 1578
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
LI +L+ GDVF ++A+ W G V + +R QTK++ YG++YG+G L++QL+ S
Sbjct: 1579 LIRVLNA-GGDVFRILASEWKGMQVHDVTAAQRQQTKQICYGMIYGIGAKALADQLSVSE 1637
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
EA +SFK+ F G+ ++L V C ++G+V ++ GRKR L I N +++A+R
Sbjct: 1638 QEAAVFCESFKAKFKGMRAYLRDTVIRCREQGFVRTMTGRKRPLPAINGNNAYARAQAER 1697
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSL-----------------AANFQM 2118
QAVN+ QGSAAD++K AM+ + P S L A++F
Sbjct: 1698 QAVNTSVQGSAADLVKAAMLKADQALTA--LWPKSRLPHLHCQEPLAGGGGRRGASSFSP 1755
Query: 2119 LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEP 2178
G +LQ+HDEL+ EV+ + + ++V+ ME+A L V L VK++VG +WG++
Sbjct: 1756 PPG-AYFILQLHDELIYEVNAQHVSQVATVVKDAMETALTLDVKLPVKVKVGPSWGNMND 1814
Query: 2179 FQAD 2182
+Q D
Sbjct: 1815 YQVD 1818
>gi|344236562|gb|EGV92665.1| DNA polymerase theta [Cricetulus griseus]
Length = 2534
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/754 (40%), Positives = 442/754 (58%), Gaps = 77/754 (10%)
Query: 548 ASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGN 607
A TSAGK+ VAE+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+
Sbjct: 54 APTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGS 113
Query: 608 QGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLL 667
+AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLL
Sbjct: 114 SSPTGRFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLL 173
Query: 668 TKLRYAAGEGTSDSSSGENSGTSSGKADPAHGL----QIVGMSATMPNVAAVADWLQAAL 723
TK+ Y + T +AD A L QIVGMSAT+PN+ VA WL A L
Sbjct: 174 TKICYVTRKSTL------------CQADSARALCNAVQIVGMSATLPNLQLVASWLDAEL 221
Query: 724 YETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVL 783
Y T+FRPVPL E IK+GN+IY M +VR + + G D DHIV LC E V + HSVL
Sbjct: 222 YHTDFRPVPLLESIKIGNSIYDSSMKLVRELQPVLQVKG-DEDHIVSLCYETVCDNHSVL 280
Query: 784 IFCSSRKGCESTARHVSKFLKKFSINVHSSD------SEFIDIT-------SAIDALRRC 830
+FC S+K CE A +++ N+H SEF + +D L+R
Sbjct: 281 LFCPSKKWCEKVADIIAREF----YNLHHQPERLVKPSEFPPVNLDQKSLLEVMDQLKRS 336
Query: 831 PAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRV 890
P+GLD VL+ T+P GVA+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRV
Sbjct: 337 PSGLDSVLKNTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRV 396
Query: 891 IFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHS 950
I R P G +D Y+QM GRAGR G+DT GES+L+CKP E K + LL S P+HS
Sbjct: 397 IIRTPVFGGQTLDILTYKQMVGRAGRKGVDTMGESILVCKPSEKSKGVALLQGSLEPVHS 456
Query: 951 CL--SEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR-- 1005
CL E M AILE++ GG+ T++D+ Y CT L + K + ++ QD +
Sbjct: 457 CLQRQEVTANMIRAILEIIVGGVASTSQDMQTYASCTFLAAAVKEGKQGIQRNQDDVHFG 516
Query: 1006 -------WLCHRKFLEWNEDT-----KLYSTTPLGRAAFGSSLCPEESLIVLDDLSRARE 1053
WL +F++ E + K+Y T LG A SSL P ++L + DL RA +
Sbjct: 517 AIDACVTWLLENEFIQEAEPSDGSGGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMK 576
Query: 1054 GFVLASDLHLVYLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHG 1112
GFVL +DLH+VYL TP+ + DW ++ + +L + V VGV E +L R G
Sbjct: 577 GFVLENDLHIVYLVTPVFEDWTGIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG 636
Query: 1113 APMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVL 1172
K+ T H + + + KRF+ +L+L L+ E P+
Sbjct: 637 -------KVVARTDRQH------------------RQMAIHKRFFTSLVLLDLISEIPLK 671
Query: 1173 EVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVE 1232
E+ + + RG +Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +
Sbjct: 672 EINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCD 731
Query: 1233 LTTIPYVKGSRARALYKAGLRTPLAIAEASISEI 1266
L + + RAR LY +G T +A A+++E+
Sbjct: 732 LIRVSLLNAQRARFLYASGFLTVADLARANVAEV 765
Score = 259 bits (663), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 265/535 (49%), Gaps = 83/535 (15%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 2004 LNSLLQKENLHDIFCKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQ 2063
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHP 1818
LAG FS +A DIA VL+ LKLP P G K G+Q
Sbjct: 2064 LAGHSFSFTSADDIAQVLFLELKLP-PNGEMKMQGSKKTLGSTRRGNENGHKLRLGRQF- 2121
Query: 1819 STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTS 1878
ST K L+ L+ HP+ +I E R ++ + + + R++ + L+ Q+
Sbjct: 2122 STSKDVLNKLKALHPLPGLILEWRRISNAITKVVFPLQREKRLNPFLRMERLYP-VSQSH 2180
Query: 1879 TATGRLSMEEPNLQCVEHMVEFKM-----------------------SNEDIYG---GNA 1912
TATGR++ EPN+Q V E KM N+ YG GN
Sbjct: 2181 TATGRITFIEPNIQNVPRDFEIKMPTVVRESPPSQAPGKRLLPMTRGQNKKFYGLHPGNG 2240
Query: 1913 EVDHCK---------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP 1963
+ K ++ R F+P ++LAADYSQ+ELR++AH S+D LI +L+
Sbjct: 2241 TLMEEKASDRGVPFSVSMRHAFVPF-PGGVILAADYSQLELRILAHLSRDCRLIQVLNT- 2298
Query: 1964 HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIK 2023
DVF IAA W DSVG R Q K++ YGI+YGMG +L EQ+ N+A I
Sbjct: 2299 GADVFRSIAAEWKMIEPDSVGEDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYID 2358
Query: 2024 SFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQ 2083
SFKS + G+ +L V C + G+V+++ GR+R+L IK N K+ A+RQA+N+ Q
Sbjct: 2359 SFKSRYTGINHFLRDTVKKCRRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTTVQ 2418
Query: 2084 GSAADIIKIAMINI-------HSIIVGGVYK------------PDSSLAANFQMLKGRCR 2124
GSAADI+K A +NI HS ++ P L F ++G
Sbjct: 2419 GSAADIVKTATVNIQKQLETFHSAFKSHGHRESMLQHGQTGLLPKKKLKGMFCPMRGGF- 2477
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+LQ+HDEL+ EV + + +V+K ME A L V L VK+++G++WG LE F
Sbjct: 2478 FILQLHDELLYEVAEEDVVQVAQIVKKEMECAVKLSVKLKVKVRMGASWGQLEDF 2532
>gi|384249808|gb|EIE23289.1| hypothetical protein COCSUDRAFT_42188 [Coccomyxa subellipsoidea
C-169]
Length = 1716
Score = 555 bits (1429), Expect = e-154, Method: Compositional matrix adjust.
Identities = 346/789 (43%), Positives = 464/789 (58%), Gaps = 66/789 (8%)
Query: 505 LSSWLPSEICSIYKKRGISK-LYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILML 563
L+ +LP+++ + G ++ LYPWQ E L+ GVL+ R+LV+ A TSAGKS VAE+LML
Sbjct: 213 LADYLPAKVVQGMRDAGFTRDLYPWQAEALNQPGVLKGRSLVFSAPTSAGKSAVAEVLML 272
Query: 564 RRLI---STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGG--GSLPKDTS 618
RRL + K+ALLVLP+VS+CAEK HLE LL+PL + VR Y N+ G G P+ T
Sbjct: 273 RRLCEPRTADKVALLVLPFVSLCAEKEAHLERLLKPLDKEVRGMYSNKSGAAGINPETTG 332
Query: 619 VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGT 678
V VCTIEKAN LVNR+LEE ++ + +VIDELHMV D+ RGYLLELLLTKLRY+
Sbjct: 333 VVVCTIEKANILVNRLLEEEKMGILSCLVIDELHMVGDEQRGYLLELLLTKLRYST--AG 390
Query: 679 SDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
D +GE GLQI+GMSATM N AA A WL A LYET+FRPVPL +++K
Sbjct: 391 VDEVAGE-------------GLQIIGMSATMSNAAAFASWLDAELYETSFRPVPLRKFVK 437
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
VG I ++ D VR + AA+ DH+ L E V G SVLIFC+S+K C ARH
Sbjct: 438 VGCQIRDERGDPVRKL--AADPHWDREDHVALLARETVDAGKSVLIFCASKKKCSDVARH 495
Query: 799 VSKFL----KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
+++ L ++F D+ D + + L + + L T GVA+HHA L+
Sbjct: 496 IAEMLGSIEERFLGGEELGDTCRADFHAELLGL----SDKNADLAYTFQFGVAFHHADLS 551
Query: 855 VEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRD--FIDGTRYRQMAG 912
EER +VE +R G +RVLTATSTLAAGVNLPA RVI ++ IG + ++ ++ RQMAG
Sbjct: 552 HEERAIVEKAFRSGALRVLTATSTLAAGVNLPAARVIIKEWYIGLESQWLTRSQIRQMAG 611
Query: 913 RAGRTGIDTKGESMLIC---KPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAG 969
RAGR G+D GE++L P + +I L+ + + SCL E + GM A+LEVVA
Sbjct: 612 RAGRAGLDDTGEAILCANPRNPRQADEIAKLIQDGHDMVDSCLIEGRKGMDRAVLEVVAS 671
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVV-KSAQDSLRWLCHRKFLEWNEDTKLYSTTPLG 1028
V T D+ RYV+CTLL +TK FQ+VV K+A D+LR L ++ + W + L+ T LG
Sbjct: 672 KAVATKHDVKRYVQCTLLAATKDFQEVVTKAATDALRSLQQQRLITWEQKAGLWGPTLLG 731
Query: 1029 RAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLEL 1088
A S L + +L DL +AREG L SDLHL YL TP + +V +WE +
Sbjct: 732 SAVVASGLDIQNALDYKQDLDKAREGLCLDSDLHLCYLITPRSEDVCRNWETCCNVIRSV 791
Query: 1089 SALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQ 1148
+ V VGV+ +L R +G H L R I + +
Sbjct: 792 QGVQAKVRELVGVNMGWLTR-----------------EGCH--LSARAKIPDKH----SH 828
Query: 1149 TLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGW 1208
T RVC+RF+ AL+LS +V E + E + V R + Q LQE AG+ A M++ FCER+GW
Sbjct: 829 TARVCRRFFTALVLSDVVDEVEPRVIFERYGVKRFVTQQLQEQAGKHAGMMAAFCERMGW 888
Query: 1209 YDLEGLIAKFQ------NRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEAS 1262
+LE LIA FQ +R GV+ EIV LT IP+V + AR L+ GLR IA
Sbjct: 889 RNLEMLIAAFQAGAPPISRALAGVKQEIVALTEIPHVGPASARLLFNGGLRNAETIARLP 948
Query: 1263 ISEIVKALF 1271
++ + A+
Sbjct: 949 NTDTLVAIL 957
Score = 249 bits (637), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 191/692 (27%), Positives = 299/692 (43%), Gaps = 167/692 (24%)
Query: 1530 EIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRI 1589
EI G+AV W +Y LP TPE W+ +
Sbjct: 1147 EISGVAVAWNEHSCFY--LPA-----------------------TPEA--------WEVV 1173
Query: 1590 GEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHL 1649
++E + +K T +K Q+ L G L PV L
Sbjct: 1174 ARMLESQAAQKLTHELKPQLAALLR--------------------PTRGCGGAALRPVAL 1213
Query: 1650 KDG-IDMCIVSWILWPD-DERSSNPN---------------LEKEVKKRLSSEAAAAANR 1692
+D+CI +W+ PD S NPN L K ++ +EA A R
Sbjct: 1214 SGRLVDVCIAAWLAMPDCAAVSDNPNTAGFRARSQPTGVEGLLKACMQQAPTEAINALAR 1273
Query: 1693 SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELW 1752
S + + + A C+R A L + L +E L+ L +E+PLV +LA ME
Sbjct: 1274 SSTFSQRRKDA-----CKRAAGILRL----YNHLHAEGLLRPLREVEMPLVPLLAHMEAV 1324
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
G+ VD + + L++++ L+ AG F + + ++ VL+ L+LP+
Sbjct: 1325 GVAVDPTIFAKHKRPLERRVAELDALMERAAGGAFDVASPKEVREVLFERLRLPV----- 1379
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLAR--------ISMS 1864
L+ L HP+ +++E RTLAK+L + + AR + +
Sbjct: 1380 ------------LEELATAHPVARLLQERRTLAKVLADFVNTFAHRARRASLGSPGVVRN 1427
Query: 1865 TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEF----------------KMSNEDIY 1908
+ G + QTS ATGRL+MEEPNLQ V F + ++ +
Sbjct: 1428 GALVRIRGSFCQTSCATGRLAMEEPNLQNVPRPRAFSVEATQSATQLPAADGRAASRRDH 1487
Query: 1909 GGNAEVDHCKINA-RDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDV 1967
N +H I R+ F+ + +LL+ADY+Q+ELRLMAH S D LI LS P D
Sbjct: 1488 SANIRREHGGIEMHREAFV-APAGRVLLSADYAQMELRLMAHMSGDTRLIATLSDPAQDP 1546
Query: 1968 FTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKS 2027
F AA+W V Q+RD K + YG+LYG+G + L+ ++ + EA +K F++
Sbjct: 1547 FKHWAAQWLRIPPHLVSVQQRDHAKAMAYGLLYGLGKDRLAARMEVTPQEAAQKSADFRA 1606
Query: 2028 SFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAA 2087
S P + +WL V C + ++ +L GR+R+L I + + +A+RQA+NS
Sbjct: 1607 SIPVLDAWLKRVVEECRARKFITTLAGRRRYLPDIGHSDRGRRGRAERQAINST------ 1660
Query: 2088 DIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVS 2147
+Q+HDEL+ E++ + A +
Sbjct: 1661 ---------------------------------------VQIHDELLFEIEEGALPAAAA 1681
Query: 2148 LVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
L+++CME+AA L VPL VK+ VG +WG L+P+
Sbjct: 1682 LIRQCMENAAPLSVPLRVKLNVGPSWGGLQPY 1713
>gi|402859187|ref|XP_003894049.1| PREDICTED: DNA polymerase theta [Papio anubis]
Length = 2575
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 315/801 (39%), Positives = 461/801 (57%), Gaps = 89/801 (11%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 73 DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 132
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 133 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDI 192
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y T
Sbjct: 193 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI----TR 248
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S+S + SS ++ +QIVGMSAT+PN+ VA WL A Y T+FRPVPL E +KV
Sbjct: 249 KSASCQAHLASS----LSNAVQIVGMSATLPNLELVASWLNAEHYHTDFRPVPLLESVKV 304
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DH+V LC E +++ HSVL+FC S+ CE A +
Sbjct: 305 GNSIYDSSMKLVREFEPMLQVKG-DEDHVVSLCYETIRDNHSVLLFCPSKTWCEKLADII 363
Query: 800 SKFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPAGLDPVLEETLPSGV 846
++ N+H + ++ +D LRR P+GLD VL++T+P GV
Sbjct: 364 AREF----YNLHHQTEGLVKPSECPPVNLEQKELLEVMDQLRRLPSGLDSVLQKTVPWGV 419
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
A+HHAGLT+EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 420 AFHHAGLTLEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILT 479
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNGMTH 961
Y+QMAGRAGR G+DT GES+LICK E K + LL S P+ SCL E M
Sbjct: 480 YKQMAGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTASMIR 539
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHRK 1011
AILE++ GG+ T++D+H Y CT L S K + ++ Q+S++ WL +
Sbjct: 540 AILEIIVGGVASTSQDMHTYAACTFLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENE 599
Query: 1012 FLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH++YL
Sbjct: 600 FIQSTEASDGTEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYL 659
Query: 1067 STPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDST 1125
TP+ + DW ++ + +L + V VGV E +L R G K+ T
Sbjct: 660 VTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVTRT 712
Query: 1126 KGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMV 1185
+ H ++ + KR ++LIL R +K R +
Sbjct: 713 ERQHRQM----------------AIHKSKREILSLILLR-----------NPYKPLRRKL 745
Query: 1186 QALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1245
A++ M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR
Sbjct: 746 WAMR-------GMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRAR 798
Query: 1246 ALYKAGLRTPLAIAEASISEI 1266
LY +G T +A A+I E+
Sbjct: 799 VLYASGFHTVADLARANIVEV 819
Score = 245 bits (626), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 262/531 (49%), Gaps = 81/531 (15%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY LAG
Sbjct: 2048 LLQKENLQDVFHKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAG 2107
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHPSTD 1821
FS ++ DIA VL+ LKLP P G K G+Q ST
Sbjct: 2108 HSFSFTSSDDIAEVLFLELKLP-PNGEMKNQGSKKTLGSTRRGNDNGRKLRLGRQF-STS 2165
Query: 1822 KHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTAT 1881
K L+ L+ HP+ +I E R + + + + R++ ++ Q+ TAT
Sbjct: 2166 KDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-VSQSHTAT 2224
Query: 1882 GRLSMEEPNLQCVEHMVEFKMS--------NEDIYGGNAEVDHCK--------------- 1918
GR++ EPN+Q V E KM ++ I G + K
Sbjct: 2225 GRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAIGKGLLPMGRGKSKKGCSLNPGRQAQM 2284
Query: 1919 ------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
I+ R F+P ++LAADYSQ+ELR++AH S D LI +L+ D
Sbjct: 2285 EERAADRGMPFSISMRHAFVPF-PGGLILAADYSQLELRILAHLSHDRRLIQVLNT-GAD 2342
Query: 1967 VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFK 2026
VF IAA W SVG R Q K++ YGI+YGMG +L EQ+ N+A I SFK
Sbjct: 2343 VFRSIAAEWKMIEPQSVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFK 2402
Query: 2027 SSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSA 2086
S + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQAVN+ QGSA
Sbjct: 2403 SRYTGINQFMRETVKNCKRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAVNTTVQGSA 2462
Query: 2087 ADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQMLKGR-CR-----LLLQ 2128
ADI+KIA +NI HS G+ + D + + L+G C +LQ
Sbjct: 2463 ADIVKIATVNIQKQLETFHSTFKSHGHREGMLRSDRTGLLRKRKLQGMFCPVRGGFFILQ 2522
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L+ F
Sbjct: 2523 LHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDF 2573
>gi|195053948|ref|XP_001993888.1| GH22128 [Drosophila grimshawi]
gi|193895758|gb|EDV94624.1| GH22128 [Drosophila grimshawi]
Length = 2218
Score = 552 bits (1422), Expect = e-153, Method: Compositional matrix adjust.
Identities = 314/838 (37%), Positives = 475/838 (56%), Gaps = 98/838 (11%)
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILM 562
+S+W LP + YKK+G+ +++ WQVECL VL + NLVY A TSAGK+ V+EIL+
Sbjct: 293 ISAWNLPHSVLGEYKKKGVVQMFDWQVECLCKPKVLFEHSNLVYSAPTSAGKTLVSEILL 352
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVC 622
L+ ++ GK LL+LP++S+ EK +L+ LL P G V ++G + VA+C
Sbjct: 353 LKTVLERGKKVLLILPFISVVREKMFYLQDLLTPAGYRVEGFFGGYTPPGGFESIHVAIC 412
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKANS+VN++LE+G+L EIG +V+DE+H+++D RGY+LELLL K+ Y + +
Sbjct: 413 TIEKANSIVNKLLEQGKLDEIGTVVVDEVHLISDAGRGYILELLLAKVLYMSRK------ 466
Query: 683 SGENSGTSSGKADPAHGLQI--VGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVG 740
HGLQI + MSAT+ NV + WL A LY T++RPV L+E IKVG
Sbjct: 467 ---------------HGLQIQIITMSATLANVQLLQQWLNAELYITDYRPVALQEMIKVG 511
Query: 741 NAIYSKKMDVVRTILTAANLG--GKDPDHIVELCDEVVQEGHSVLIFCSSRKGCE----- 793
N IY ++ +R I +++ + G D DH+ +LC E + EG SV++FC S+ CE
Sbjct: 512 NKIYDNQLRFLRNISSSSEVPPLGNDADHVAQLCIETLLEGCSVVVFCPSKDWCENLAVQ 571
Query: 794 -STARHV-----SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVA 847
+TA H SK K+ +++ E + LR P GLD ++ + + G A
Sbjct: 572 LATAMHALIKSDSKLAKRLRSQLNTESIEVVK-----QQLRDIPTGLDAIMSKAITYGCA 626
Query: 848 YHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY 907
+HHAGLT EER++VE ++ G ++V+ ATSTL++GVNLPARRV+ R P G + Y
Sbjct: 627 FHHAGLTTEERDIVEASFKAGALKVIVATSTLSSGVNLPARRVLIRSPLFGGKQMSSLTY 686
Query: 908 RQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTH---AIL 964
RQM GRAGRTG DT GES+LIC + L+ P+ SCL D +G TH A+L
Sbjct: 687 RQMIGRAGRTGKDTLGESILICTESNARIGRELVTAQLKPIRSCL--DLDGSTHLKRALL 744
Query: 965 EVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQ--------------DSLRWLCHR 1010
EV++ G+ + +D+ + CTLL+ K V+ D+L +L
Sbjct: 745 EVISSGVASSKKDVDSFFNCTLLSVQKTLNPQVEKETEDEDKDEDEAHYITDALDFLVEY 804
Query: 1011 KF--LEWNE--DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
+F L+ +E DT+ Y T LG A SS+ P + LI+ +L ++R FVL S+LH VYL
Sbjct: 805 EFIRLQTDEETDTEHYVATRLGAACLASSMPPTDGLILFAELQKSRRCFVLESELHAVYL 864
Query: 1067 STPINVEVE---PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRD 1123
TP +V + DW LY + + +L+ + VG +GV E +L+R G
Sbjct: 865 VTPYSVCYQLQDVDWLLYLDMWEKLNPAMKKVGELIGVKEAFLVRAMRG----------- 913
Query: 1124 STKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARG 1183
KL+Y+L +++ KRFY AL L LV ETP+ V FK RG
Sbjct: 914 -----QTKLDYKL-------------MQIHKRFYTALALQELVNETPINVVAHKFKCQRG 955
Query: 1184 MVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSR 1243
M+Q+LQ+ A FA +V+ FC L W L ++++F++R+ FG+ ++++L +P + R
Sbjct: 956 MLQSLQQMASTFAGIVTAFCNSLQWSTLALVVSQFKDRLYFGIHRDLIDLMRLPDLTHKR 1015
Query: 1244 ARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVL 1301
AR L+ AG+ + + +A A++ + + LF+S S+ + Q+ + + +N AR +
Sbjct: 1016 ARLLHDAGITSLVELAGANLLALEQLLFDSLSFDSAKQQEHEDAIEAAKRNSARNFFI 1073
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 187/661 (28%), Positives = 314/661 (47%), Gaps = 104/661 (15%)
Query: 1531 IHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIG 1590
+ G+A C ++ +Y++N+ + + +++ LI S + +++
Sbjct: 1644 VAGVAFCLADNVIYWLNMQSE---EGQQQQDHLISSS----------------MKVEQLC 1684
Query: 1591 EIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLK 1650
+M ++++ T + K Q++ L+ ++R V L+
Sbjct: 1685 RLMGRQELTLLTHDGKEQLKTLRQVLPQLERMN-----------------------VQLE 1721
Query: 1651 DGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGRWKNQMRRAAHNGC 1708
D + +W+L PD S + + ++ + E A +N SGR + A +
Sbjct: 1722 DPK---VGNWLLQPDKMLSF-----QNLCQQFAPECTALSNLCGSGRGYSSYGLDASSAI 1773
Query: 1709 CRRVAQTRALCSVLWKL---------LVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
+V + C + L + + +L++ +E+P+ L ME IG +
Sbjct: 1774 MAKVRASIEACVTVHILNGQIENLERIGTGQLLKFFRELEMPIQISLCHME--SIGFPAK 1831
Query: 1760 GCLQARNLLQKKL---RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQ 1816
G + + L Q+ L + LE K Y L G +F+L + +A VL H K
Sbjct: 1832 GH-RLQTLFQQMLATMKKLEAKIYELHGSRFNLGSTQAVAKVL---------GLHRKANG 1881
Query: 1817 HPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQ 1876
ST + L+ L + P+ +I +R L+ LL+ + + Q +HG +
Sbjct: 1882 RISTSRQILEKL--DSPMSQLILNYRKLSMLLSKNMQPLLKCC------QANRVHGQSI- 1932
Query: 1877 TSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLA 1936
T TATGR+SM EPNLQ V E ++ E I I+ R F P LL+
Sbjct: 1933 TYTATGRISMSEPNLQNVAKDFEIQLGAEKI----------NISCRSAFAPMDGKRCLLS 1982
Query: 1937 ADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIY 1996
AD+ Q+E+R++AH S+D AL+ +++ P D+FT IAA W E V Q R+ TK++ Y
Sbjct: 1983 ADFCQLEMRILAHLSQDQALLKVMNSPQ-DLFTAIAAHWNKIPESEVSEQLRNGTKQICY 2041
Query: 1997 GILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRK 2056
GI+YGMG +L+E L C+ EA+ + F ++ G+ ++ V GYVE++ GR+
Sbjct: 2042 GIVYGMGMRSLAESLKCTEQEAQMISEQFHLAYAGIKAYAMKVVKFARNNGYVETITGRR 2101
Query: 2057 RFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANF 2116
R+L I G + K++A+RQA+NS QGSAADI K A++ + I G Y+ LA N
Sbjct: 2102 RYLDHINSGEPQIKNQAERQAINSTIQGSAADIAKSAILRMEKNI--GRYREKLGLAEN- 2158
Query: 2117 QMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
L+L +HDEL+ EV K+ ++ ME+ L VPL VK+++G +WG L
Sbjct: 2159 -----AVNLVLHLHDELIFEVPVDKAKKVAKVLSLTMENCVKLSVPLRVKLKIGRSWGDL 2213
Query: 2177 E 2177
+
Sbjct: 2214 Q 2214
>gi|195069821|ref|XP_001997038.1| GH25245 [Drosophila grimshawi]
gi|193905759|gb|EDW04626.1| GH25245 [Drosophila grimshawi]
Length = 2235
Score = 548 bits (1412), Expect = e-152, Method: Compositional matrix adjust.
Identities = 315/838 (37%), Positives = 475/838 (56%), Gaps = 99/838 (11%)
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILM 562
+S+W LP + YKK+G+ +++ WQVECL VL + NLVY A TSAGK+ V+EIL+
Sbjct: 279 ISAWNLPHSVLGEYKKKGVVQMFDWQVECLCKPKVLFEHSNLVYSAPTSAGKTLVSEILL 338
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVC 622
L+ ++ GK LL+LP++S+ EK +L+ LL P G V ++G + VA+C
Sbjct: 339 LKTVLERGKKVLLILPFISVVREKMFYLQDLLTPAGYRVEGFFGGYTPPGGFESIHVAIC 398
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKANS+VN++LE+G+L EIG +V+DE+H+++D RGY+LELLL K+ Y + +
Sbjct: 399 TIEKANSIVNKLLEQGKLDEIGTVVVDEVHLISDAGRGYILELLLAKVLYMSRK------ 452
Query: 683 SGENSGTSSGKADPAHGLQI--VGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVG 740
HGLQI + MSAT+ NV + WL A LY T++RPV L+E IKVG
Sbjct: 453 ---------------HGLQIQIITMSATLANVQLLQQWLNAELYITDYRPVALQEMIKVG 497
Query: 741 NAIYSKKMDVVRTILTAANLG--GKDPDHIVELCDEVVQEGHSVLIFCSSRKGCE----- 793
N IY ++ +R I +++ + G D DH+ +LC E + EG SV++FC S+ CE
Sbjct: 498 NKIYDNQLRFLRNISSSSEVPPLGNDADHVAQLCIETLLEGCSVVVFCPSKDWCENLAVQ 557
Query: 794 -STARHV-----SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVA 847
+TA H SK K+ +++ E + LR P GLD V+ + + G A
Sbjct: 558 LATAMHALIKSDSKLAKRLRSQLNTESIEVVK-----QQLRDIPTGLDAVMSKAITYGCA 612
Query: 848 YHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY 907
+HHAGLT EER++VE ++ G ++V+ ATSTL++GVNLPARRV+ R P G + Y
Sbjct: 613 FHHAGLTTEERDIVEASFKAGALKVIVATSTLSSGVNLPARRVLIRSPLFGGKQMSSLTY 672
Query: 908 RQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTH---AIL 964
RQM GRAGRTG DT GES+LIC + L+ P+ SCL D +G TH A+L
Sbjct: 673 RQMIGRAGRTGKDTLGESILICTESNARIGRELVTAQLKPIRSCL--DLDGSTHLKRALL 730
Query: 965 EVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQ--------------DSLRWLCHR 1010
EV++ G+ + +D+ + CTLL++ K V D+L +L
Sbjct: 731 EVIS-GVASSKKDVDSFFNCTLLSAQKTLNPQVDKETEDEDKDEDESHYIADALDFLVEY 789
Query: 1011 KF--LEWNE--DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
+F L+ +E DT+ Y T LG A SS+ P + LI+ +L ++R FVL S+LH VYL
Sbjct: 790 EFIRLQTDEETDTEHYVATRLGAACLASSMPPTDGLILFAELQKSRRCFVLESELHAVYL 849
Query: 1067 STPINVEVE---PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRD 1123
TP +V + DW LY + + +L+ + VG +GV E +L+R G
Sbjct: 850 VTPYSVCYQLQDVDWLLYLDMWEKLNPAMKKVGELIGVKEAFLVRAMRG----------- 898
Query: 1124 STKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARG 1183
KL+Y+L +++ KRFY AL L LV ETP+ V FK RG
Sbjct: 899 -----QTKLDYKL-------------MQIHKRFYTALALQELVNETPINVVAHKFKCQRG 940
Query: 1184 MVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSR 1243
M+Q+LQ+ A FA +V+ FC L W L ++++F++R+ FG+ ++++L +P + R
Sbjct: 941 MLQSLQQMASTFAGIVTAFCNSLQWSTLALVVSQFKDRLYFGIHRDLIDLMRLPDLTHKR 1000
Query: 1244 ARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVL 1301
AR L+ AG+ + + +A A++ + + LF+S S+ + Q+ + + +N AR +
Sbjct: 1001 ARLLHDAGITSLVELAGANLLALEQLLFDSLSFDSAKQQEHEDAIEAAKRNSARNFFI 1058
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 237/451 (52%), Gaps = 43/451 (9%)
Query: 1730 ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL---RYLEKKAYTLAGMK 1786
+L++ +E+P+ L ME IG +G + + L Q+ L + LE K Y L G +
Sbjct: 1821 QLLKFFRELEMPIQISLCHME--SIGFPAKGH-RLQTLFQQMLATMKKLEAKIYELHGSR 1877
Query: 1787 FSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAK 1846
F+L + +A VL H K ST + L+ L + P+ +I +R L+
Sbjct: 1878 FNLGSTQAVAKVL---------GLHRKANGRISTSRQILEKL--DSPMSQLILNYRKLSM 1926
Query: 1847 LLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNED 1906
LL+ + + Q +HG + T TATGR+SM EPNLQ V E ++ E
Sbjct: 1927 LLSKNMQPLLKCC------QANRVHGQSI-TYTATGRISMSEPNLQNVAKDFEIQLGAEK 1979
Query: 1907 IYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
I I+ R F P LL+AD+ Q+E+R++AH S+D AL+ +++ P D
Sbjct: 1980 I----------NISCRSAFAPMDGKRCLLSADFCQLEMRILAHLSQDQALLKVMNSPQ-D 2028
Query: 1967 VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFK 2026
+FT IAA W E V Q R+ TK++ YGI+YGMG +L+E L C+ EA+ + F
Sbjct: 2029 LFTAIAAHWNKIPESEVSEQLRNGTKQICYGIVYGMGMRSLAESLKCTEQEAQMISEQFH 2088
Query: 2027 SSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSA 2086
++ G+ ++ V GYVE++ GR+R+L I G + K++A+RQA+NS QGSA
Sbjct: 2089 LAYAGIKAYAMKVVKFARNNGYVETITGRRRYLDHINSGEPQIKNQAERQAINSTIQGSA 2148
Query: 2087 ADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAV 2146
ADI K A++ + I G Y+ LA N L+L +HDEL+ EV K+
Sbjct: 2149 ADIAKSAILRMEKNI--GRYREKLGLAEN------AVNLVLHLHDELIFEVPVDKAKKVA 2200
Query: 2147 SLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
++ ME+ L VPL VK+++G +WG L+
Sbjct: 2201 KVLSLTMENCVKLSVPLRVKLKIGRSWGDLQ 2231
>gi|242007943|ref|XP_002424774.1| DNA polymerase theta, putative [Pediculus humanus corporis]
gi|212508297|gb|EEB12036.1| DNA polymerase theta, putative [Pediculus humanus corporis]
Length = 1350
Score = 548 bits (1412), Expect = e-152, Method: Compositional matrix adjust.
Identities = 336/940 (35%), Positives = 507/940 (53%), Gaps = 99/940 (10%)
Query: 503 LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEIL 561
L LSSW LP ++ YK +GI ++PWQ+ECL + VL+ NLVY A TSAGK+ VAEIL
Sbjct: 44 LKLSSWGLPLKVLDFYKSKGIINMFPWQLECLSLGRVLEGGNLVYSAPTSAGKTLVAEIL 103
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAV 621
+ + + K AL++LP+VS+ EK + + + G HV Y G K +AV
Sbjct: 104 ISKSIFEVQKKALMILPFVSVVREKMFYFQSMFGSSGIHVEGYMGGHSPSISFKQVHLAV 163
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS 681
CTIEKAN+++NR+LEE L +G++++DELH++ D RGYLLELLLTKL+Y
Sbjct: 164 CTIEKANAIINRLLEEQSLQNLGLVIVDELHLLGDPYRGYLLELLLTKLKYI-------- 215
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN 741
S K+D +QIVGMSAT+PN+ ++ADWL A LY T+FRPVPL+E +K G+
Sbjct: 216 ---------SEKSD--FKIQIVGMSATLPNLKSLADWLLADLYYTDFRPVPLKETLKCGS 264
Query: 742 AIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSK 801
+ K ++ V + D +++ +LC E + GHSVLIFC ++ CE+ A ++
Sbjct: 265 FFFDKHLNKVSELKILEAELSDDAENVGQLCLETIANGHSVLIFCPTKVWCENLADKIAM 324
Query: 802 FLKKFSIN-----------VHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHH 850
F KK + + I I+ L+ CP GLD L +T+ GVA+HH
Sbjct: 325 FFKKNGCHKSAEIEGTPGWILRKQLNLKKINEVIEHLKMCPVGLDTDLHKTVSYGVAFHH 384
Query: 851 AGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQM 910
AGLT++ER+++E +RKG +RVL ATSTL++GVNLPARRVI R P +D YRQM
Sbjct: 385 AGLTLDERDIIEGSFRKGSLRVLCATSTLSSGVNLPARRVIIRSPMSFGGIMDILTYRQM 444
Query: 911 AGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK--NGMTHAILEVVA 968
GRAGR G+D++GES+LI KP E L+ + P+ SCL + + A+LE++A
Sbjct: 445 IGRAGRMGVDSEGESILIAKPNEKTLCQTLMCSTLKPIESCLGHGRLSASLKRALLEIIA 504
Query: 969 GGIVQTAEDIHRYVRCTLLNST------------------------KPFQDVVKSAQDSL 1004
GI T E++ +Y CT L + + +D +KS D
Sbjct: 505 SGIAATPEEVDKYASCTFLAFSSKHDIQVRNRVMLFHKLNNKIFINETLKDPIKSCID-- 562
Query: 1005 RWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
+L +F+ E+ +++ TPLG+A SSL P+E L + +L RAR FVL +DLH++
Sbjct: 563 -FLEENEFIRLQENGTIFTPTPLGKACLASSLPPDEGLALFRELQRARRCFVLDTDLHII 621
Query: 1065 YLSTPINVEVE---PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKL 1121
Y TP +V + DW + + + VG VG+ E +L+R+A G
Sbjct: 622 YQVTPYSVSEQWSKIDWLNALSILESIPSSMKRVGEMVGIEEAFLVRVAKGM-------- 673
Query: 1122 RDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVA 1181
I +NN + + L + +RFY +L L LV E P+ EV + F+
Sbjct: 674 ----------------INTNN-VENRNKLSIHRRFYTSLALQDLVNEIPLSEVAKKFECN 716
Query: 1182 RGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKG 1241
+GM+Q+LQ++A +A MV+ F + LGW +E + ++FQ R+ FG++ E+ EL +P +
Sbjct: 717 KGMLQSLQQSAATYAGMVTEFTKCLGWNSVELIFSQFQERLQFGIQRELCELMRLPLLNA 776
Query: 1242 SRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKN------- 1294
RAR +Y AG +++A A++ E+ ALF + + ++ + K +N
Sbjct: 777 VRARVIYNAGFTNLISLANANVVELENALFSVAPFQSKKMIAGETKFDKDERNKLETIWI 836
Query: 1295 -GARKIVLEKAEEARIAAFSAF--KSLGLNVPQFSRPILSTATENSTGEEEAATTAPRND 1351
G + + +A E I+ LGL P++ + S + S + E + D
Sbjct: 837 TGKADLSIREAAELLISEARNILELELGLENPKWGKANNSFSKNESFVKVENHSVIQLMD 896
Query: 1352 KSSSFIFPVPMEHSDKPSLEANQISKKVDLESAGEKLLET 1391
K S V E S + E NQ +K ++ ++ E LLE
Sbjct: 897 KISKEK-SVEKEKSTREFREVNQSAKGINNDNQNEILLEN 935
>gi|91091764|ref|XP_969311.1| PREDICTED: similar to DNA polymerase theta [Tribolium castaneum]
gi|270001085|gb|EEZ97532.1| hypothetical protein TcasGA2_TC011380 [Tribolium castaneum]
Length = 1588
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 321/831 (38%), Positives = 470/831 (56%), Gaps = 78/831 (9%)
Query: 488 DEAGTPSSSGMLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLV 545
D A P D L+SW LP+ I Y R I+ ++PWQVECL+ +L +NLV
Sbjct: 169 DSASLPRDLEPTNDSRSLASWGLPAAILDKYASRNITMMFPWQVECLNNPKILTMNKNLV 228
Query: 546 YCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYY 605
Y A TSAGK+ VAEIL ++ ++ K + +LP+VS+ EK + + + G V +
Sbjct: 229 YSAPTSAGKTLVAEILSIKTVLERSKKVIFILPFVSVVREKMFYFQDIFGGSGVRVEGFM 288
Query: 606 G--NQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLL 663
G N GG K AVCTIEKANSL+N L++G L EIG +VIDE+H++ + +RGY+L
Sbjct: 289 GSYNPPGGF--KSVQFAVCTIEKANSLINGFLQDGSLGEIGTVVIDEMHLLGETHRGYIL 346
Query: 664 ELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAAL 723
ELLLTKL+Y + + +QI+GMSAT+PN+ +ADWL A L
Sbjct: 347 ELLLTKLKYMTLKHQIE-------------------IQIIGMSATLPNLKTLADWLDAEL 387
Query: 724 YETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVL 783
Y TN+RP+PL E++ +G+++Y + +VRT+ A D DHI++LC E + SVL
Sbjct: 388 YVTNYRPIPLHEHVLLGDSLYDSRFRLVRTLDPAPY---PDTDHILQLCLETITANCSVL 444
Query: 784 IFCSSRKGCESTARHVSKFLKKFSINV------HSSDSEFIDITSAIDALRRCPAGLDPV 837
IFC ++ CE+ A +++ K H ++E I ++ L P GLD V
Sbjct: 445 IFCPTKNWCENLALQIAQAFYKLGRGQADHALRHQLNAE--AIGELLNQLALSPIGLDDV 502
Query: 838 LEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRI 897
L + + GV +HHAGLT++ER+++E +R G++RVL ATSTL++GVNLPARRVI R P
Sbjct: 503 LRKCVSFGVGFHHAGLTLDERDIIEGGFRGGVIRVLVATSTLSSGVNLPARRVIIRTPIF 562
Query: 898 GRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKN 957
IDG YRQM GRAGR G DT GES+L+C+ ++ K + +L + P+ SCL +D
Sbjct: 563 HGRAIDGLSYRQMVGRAGRMGKDTAGESILVCQKKDEKIVRKILEDELEPIVSCLEQDGR 622
Query: 958 GMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNE 1017
+ AILE++A G+ T +D+ + +CTLL T S +++L +L +FL +
Sbjct: 623 -LRRAILEIIASGVATTYDDVRLFAKCTLLGQT--------SVEEALDFLLCNEFLRLGD 673
Query: 1018 DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE-- 1075
D Y+ + LG+A SSL PE+ L +L +L +AR+ FVL ++L LVYL TP + +
Sbjct: 674 DK--YTPSGLGKACLTSSLPPEDGLALLGELDKARQCFVLNTELQLVYLVTPYSACHQWG 731
Query: 1076 -PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEY 1134
DW Y + + +L Q VG VGV E Y++ G
Sbjct: 732 NLDWMNYLQVWEKLPTTMQKVGELVGVRESYIVAATRGQ--------------------- 770
Query: 1135 RLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGR 1194
+ SNN Q +V KRFY+AL L LV E P+ VC F RG++Q LQ A
Sbjct: 771 ---LPSNNY----QKQQVHKRFYIALALQDLVNERPLASVCAKFGCNRGLLQTLQLTAAT 823
Query: 1195 FASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRT 1254
FA MV+ F ++LGW ++E LI++FQ+R+ FGV ++++L +P + G ARALY AGL T
Sbjct: 824 FAGMVTAFAKQLGWANVEILISQFQDRLHFGVSRDLLDLMRLPLLNGRSARALYNAGLET 883
Query: 1255 PLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+ IA + ++ I A + + + R + A + +N R I + E
Sbjct: 884 LIQIANSDVATIESAFLKVVPFESGKLREGETEHALRERNKFRNIWITGKE 934
Score = 253 bits (647), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 143/468 (30%), Positives = 258/468 (55%), Gaps = 63/468 (13%)
Query: 1719 CSVLWKLL------VSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
C + W +L +S+ + + + E+ ++ +LA++EL GIG ++ +LL ++L
Sbjct: 1177 CYLSWHVLKNIEVELSKSNLLTVFDTEMSIMRILANIELAGIGANVSTLSNLVDLLTREL 1236
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ +E++ + +AG FS ++ +A +L + N K+ L ++++
Sbjct: 1237 KAIERQGHAIAGRHFSFASSRQLAKIL---------QSDNNSKK---------SLQKNDN 1278
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
P+ +I + R ++ + TL + L Y H TATGR++M EPNLQ
Sbjct: 1279 PLASLILKWRKISATIGKTLQPLIRLVENGRIFGCYVTH-------TATGRITMHEPNLQ 1331
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
V + ++D +++ R F+PSQ + ++++AD+ Q+ELR++AH S+
Sbjct: 1332 NV--------------AKDFDIDGVEVSCRKAFVPSQGH-VMVSADFCQLELRVLAHLSR 1376
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D L G+L + GD+F IAA+W SE+ V + R + K++IYGI+YGMG L+EQLN
Sbjct: 1377 DEVLGGILRR-KGDIFRAIAAKWNNISENEVTEELRQRAKQIIYGIIYGMGSKALAEQLN 1435
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+A +++F++++PGV ++ + +C + G+VE+L GR+RFL+ I N KS+
Sbjct: 1436 TDEAQATRFMQTFRNAYPGVQKYISEIIETCRKTGFVETLAGRRRFLAHINHKNGAVKSQ 1495
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+RQAVN+ QGSAAD++K+AM+ + ++ +G + +L+L +HDE
Sbjct: 1496 AERQAVNTTIQGSAADLVKMAMVRLETVFLG----------------EKEVKLVLHLHDE 1539
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
L+ EV + V +++ ME + L +P VK++ G +WG L ++
Sbjct: 1540 LLYEVPEGSLGSFVRILKTEMEGSVKLSIPFPVKVKSGPSWGQLTEYK 1587
>gi|332019330|gb|EGI59836.1| Helicase POLQ-like protein [Acromyrmex echinatior]
Length = 2176
Score = 545 bits (1403), Expect = e-151, Method: Compositional matrix adjust.
Identities = 317/822 (38%), Positives = 482/822 (58%), Gaps = 78/822 (9%)
Query: 500 KDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFV 557
+D L+SW LP I Y G+ +++ WQ+ECL D V+Q R+NLVY A TSAGK+FV
Sbjct: 198 QDRCKLASWGLPPNILQKYIAHGVEEMFTWQMECLSNDLVMQERKNLVYSAPTSAGKTFV 257
Query: 558 AEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP--- 614
AE+L+++ ++ K + +LP+VS+ EK + + LL +G V YG GG P
Sbjct: 258 AEMLLIKTVLEKKKKVIFILPFVSVVREKMYYFQDLLSDVGIKV---YGFMGGSVPPGGF 314
Query: 615 KDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAA 674
T VAV TIEKANSLVNR++EE LS +G ++IDELH++ D NRGYLLELLLTKL+Y
Sbjct: 315 ATTDVAVATIEKANSLVNRLMEENDLSSLGAVIIDELHLLGDPNRGYLLELLLTKLKYMT 374
Query: 675 GEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLE 734
+Q++GMSAT+PN+ +A WL A LY+T FRP+PL
Sbjct: 375 IHNND------------------VNIQLIGMSATLPNLTLLAKWLNAELYKTEFRPIPLN 416
Query: 735 EYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
EY K+G IY K+++VR ++ LG D D+I++LC E + GHSVLIFC ++K CE
Sbjct: 417 EYCKIGANIYDNKLNLVRKLIELQELG-IDVDNILQLCIETISAGHSVLIFCPTKKWCEK 475
Query: 795 TARHVSKFLKKFSINVHSSDSEF-------ID---ITSAIDALRRCPAGLDPVLEETLPS 844
A ++ K D++F ID I ++ L+R P+GLD +L+ T+
Sbjct: 476 LAEQIATAFFKLG----CGDTKFGEMLKKEIDSTLIQETLEQLKRSPSGLDNILKNTISF 531
Query: 845 GVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDG 904
G A+HHAGLT++ER+++E +R G +RVL ATSTL++GVNLPARRVI R P G ++
Sbjct: 532 GTAFHHAGLTMDERDIIEGSFRTGSLRVLIATSTLSSGVNLPARRVIIRSPLFGGSPLNT 591
Query: 905 TRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAIL 964
Y+QM GRAGR G D+ GES+LICKP E LL+ + P+ SCL+ D + + A+L
Sbjct: 592 LTYKQMIGRAGRMGKDSAGESILICKPNERNAAASLLSAALDPIESCLN-DFSLLIRALL 650
Query: 965 EVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKF--LEWNEDTKLY 1022
E VA ++ T +D+ Y+ CTLL S DV + +++++L +F L+ E +
Sbjct: 651 EAVASEVLYTYKDLELYINCTLL-SLNEQSDVQIFSNEAIKFLLDNEFLLLQTTERESRW 709
Query: 1023 STTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE---PDWE 1079
TPLG+A +S+ P E L + ++L +AR FVL ++LH++YL TP++ + DW
Sbjct: 710 VATPLGKACLAASIPPREGLFLFEELQKARRCFVLDTELHVIYLVTPLSSGCQIGTVDWM 769
Query: 1080 LYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGIT 1139
++E + +S ++ VG VGV E +++ G
Sbjct: 770 TFHELWNTMSESERRVGKLVGVEERFVLSAIRG--------------------------- 802
Query: 1140 SNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMV 1199
++ ++L + +RFY AL L LV+E P+ VC+ + RG++Q LQ++A +A MV
Sbjct: 803 ---IVKSGKSLNIHRRFYSALALHDLVKEVPLHVVCKKYGCCRGVLQTLQQSAATYAGMV 859
Query: 1200 SVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIA 1259
+ FC++LGW +E L+++FQ R+ FGV E+++L +P + G RAR+LYK G+ T +A
Sbjct: 860 TQFCKQLGWDCMELLVSQFQTRLQFGVCRELLDLLQLPMLNGLRARSLYKQGIETVADLA 919
Query: 1260 EASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVL 1301
A+ + +AL+ + + +E + + + +N R + +
Sbjct: 920 IANELNVERALYNALPFESEKEYEGEYAFDVEKRNKMRTVFV 961
Score = 254 bits (650), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 263/467 (56%), Gaps = 52/467 (11%)
Query: 1729 EELIEALL----NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
EEL ALL +E+ ++ LA MEL GIGV+++ + +++ +++ LE KAY LAG
Sbjct: 1746 EELNPALLYTFREVEMRIMTTLACMELSGIGVNLKSLQELSSVVSNEMQSLETKAYDLAG 1805
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTL 1844
KF+ ++ ++ VL G K K+ ST K L+ + ++PI ++ R L
Sbjct: 1806 RKFNFSSSKEVGQVL----------GLYKDKK-VSTSKTVLE--KCDNPISTLVISWRKL 1852
Query: 1845 AKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN 1904
+ + +LA+ + G+ + T T TGR+SM EPNLQ V F +N
Sbjct: 1853 NATKTKMIYPLLNLAQ-----GDSRVRGNCI-TCTVTGRVSMHEPNLQNVPKDFSFADNN 1906
Query: 1905 EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
++ R F+P N I+L+ADY Q+ELRL+ HFS+D L ++ K
Sbjct: 1907 ------------LVVSVRMAFVPVLGN-IMLSADYCQLELRLLTHFSQDSILCKIM-KQS 1952
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
GD+F IAA+W +E+ V ++ R +TK+L YG++YGMG +L+E L S EA+E ++S
Sbjct: 1953 GDIFKNIAAKWNNVAEEQVTNEMRQRTKQLCYGMIYGMGVKSLAENLCISEPEAQEFLES 2012
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
F S++PG+ WL+ + H GYV +L GR+R + + +++A+RQ+VN+ QG
Sbjct: 2013 FMSAYPGIYKWLNDILEEAHHDGYVTTLLGRRREFPDLSSTKSSVRAQAERQSVNTKVQG 2072
Query: 2085 SAADIIKIAMINIHSIIVGGVYKPDSS-----------LAANFQMLKGRCRLLLQVHDEL 2133
SAADI+K AMI+I I Y PDS+ L +N Q G L+LQ+HDEL
Sbjct: 2073 SAADIVKKAMISIEDKI--RCYFPDSAIIFPEVHASRKLRSNLQQRGG--YLVLQLHDEL 2128
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
+ EV+ + +K+ +++++ ME+ L VPL VKI+VG WG L +Q
Sbjct: 2129 LYEVNLADLKKFAAIIRESMENVCQLTVPLPVKIRVGPAWGDLNDYQ 2175
>gi|383861260|ref|XP_003706104.1| PREDICTED: DNA polymerase theta-like [Megachile rotundata]
Length = 1983
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 332/844 (39%), Positives = 487/844 (57%), Gaps = 76/844 (9%)
Query: 450 SVLIVHERKLDISSQGIDSITSDSPTNVIKKPVG----NEKSDEAGTPSSSGM-LKDCLD 504
S+L V + IS+ S T ++ TNV G NE+ PS+S + +D
Sbjct: 137 SILHVTSNSIKISAL---SKTINNTTNVKLSNSGTITNNEEKSSIVIPSTSAINTQDRYK 193
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRR-NLVYCASTSAGKSFVAEILM 562
L+SW LP I Y+ RGI+ ++PWQVECL V++ + NLVY A TSAGK+ VAEILM
Sbjct: 194 LASWGLPPNILRKYESRGITTMFPWQVECLSNHKVIEEQCNLVYSAPTSAGKTLVAEILM 253
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVC 622
++ ++ K A+ +LP+VS+ EK + + LL G V+ + G T VA+
Sbjct: 254 IKTILERHKKAIFILPFVSVVREKMYYFQDLLSDSGICVQGFMGGIAPRGGFAATHVAIA 313
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKANSL+NR++EE L +G +VIDELH+V D NRGYLLELLLTKL+Y +
Sbjct: 314 TIEKANSLINRLMEENELVNLGAVVIDELHLVGDPNRGYLLELLLTKLKYM-------TI 366
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
EN +Q++GMSAT+PN++ +ADWL A LY+T FRPVPL E K+G
Sbjct: 367 RNENIN-----------VQLIGMSATLPNLSLLADWLNAELYKTEFRPVPLNEQCKMGKN 415
Query: 743 IYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKF 802
IY ++ ++RT++ L D I+ LC E + +GHS+LIFC ++ CE A H++
Sbjct: 416 IYDNELHLIRTLIPIPELTA-DSGDILHLCIETISDGHSILIFCPTKNWCEKLAEHIASM 474
Query: 803 LKKFS--------INVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
K I H DS I T ++ LRR P GLD +L+ T+ G A+HHAGLT
Sbjct: 475 FYKLGKEDTKLAEILRHQLDSTLISET--LEQLRRSPIGLDNILKNTVSFGTAFHHAGLT 532
Query: 855 VEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA 914
++ER+++E +R G +RVL ATSTL++GVNLPARRVI R P +D YRQM GRA
Sbjct: 533 MDERDIIEGAFRSGSLRVLVATSTLSSGVNLPARRVIIRSPIFNGKVLDSLTYRQMIGRA 592
Query: 915 GRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQT 974
GR G DT GES+LIC+ E K LL+ + P+ SCL E+ + A+LE +A +V T
Sbjct: 593 GRMGKDTAGESILICESHEQKAAKALLSAALKPIESCL-ENSGPLIRALLEAIASEVVYT 651
Query: 975 AEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKF--LEWNEDTKLYSTTPLGRAAF 1032
D+ Y +CTL+ S D + +++++L +F L+ ED + T G+A
Sbjct: 652 PSDLELYTKCTLI-SMDSEHDSKDPSNEAIKFLIDNEFLLLQNTEDGHRWVATAFGKACL 710
Query: 1033 GSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE---PDWELYYERFLELS 1089
+S+ P E L +L++L +AR FVL ++LH+VYL TP+N + DW + E + LS
Sbjct: 711 AASIPPREGLFLLEELQKARRCFVLDTELHVVYLVTPVNSGSQIGAIDWMTFLELWKMLS 770
Query: 1090 ALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQT 1149
++ VG VGV E +L G ++ ++
Sbjct: 771 ESERRVGQLVGVEERFLTSAIKG------------------------------IVRPGKS 800
Query: 1150 LRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWY 1209
L + +RFY AL L LV+E P+ VC+ + RG++Q+LQ++A FA MV+ FC++LGW
Sbjct: 801 LNIHRRFYTALALHDLVREMPLGTVCKKYGCCRGVLQSLQQSASTFAGMVTQFCKQLGWD 860
Query: 1210 DLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKA 1269
+E L+++FQ R+ FGV E+++L +P + G RAR+LYK G+ +A A+ ++ +A
Sbjct: 861 CMELLVSQFQARLQFGVCRELLDLLRLPMLNGLRARSLYKQGITCVADLAVANELDVERA 920
Query: 1270 LFES 1273
L+++
Sbjct: 921 LYKA 924
Score = 249 bits (635), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 253/450 (56%), Gaps = 43/450 (9%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+ ++ LA MEL G+GV ++ ++++K++ LE++AY L G KF+ ++ +I
Sbjct: 1562 DIEMRIIISLACMELNGLGVSLKSLQDLSSIVRKEMTSLEERAYALCGKKFNFSSSKEIG 1621
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L G GK+ S +K L +HP+ +I R L N T I
Sbjct: 1622 KIL----------GLYNGKK-ISVNKAVLG--HSDHPVSTLIMSWRKL----NATQTKII 1664
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
++++ +HG+ + T+T TGR+SM EPNLQ + ++ED
Sbjct: 1665 -YPLLNLAQHGCRIHGNCV-TNTLTGRISMHEPNLQNIPK----DFTSED--------GS 1710
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
I+ R F+P+ N ++L+ADY Q+ELR++ HFSKD L +++K GD+F IAA W
Sbjct: 1711 FTISVRMAFVPAVGN-VILSADYCQLELRILTHFSKDETLCDIMTKS-GDIFKNIAANWN 1768
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
SED V R TK+L YG++YGMG L+E L+ +AKE ++SF +++ G++ WL
Sbjct: 1769 HVSEDQVDDTMRQHTKQLCYGMIYGMGVKALAESLSVDELKAKEFLESFMNAYSGISKWL 1828
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V GY+ ++ R+R L + N EKS+A+RQAVN+ QGSAADI K AM+N
Sbjct: 1829 DNVVEEARINGYITTIFERRRMLPALTSTNTAEKSQAERQAVNTKVQGSAADITKKAMVN 1888
Query: 2097 IH---------SIIVGGVYKPDSSLAANFQMLKGR-CRLLLQVHDELVLEVDPSVIKEAV 2146
I S+ + P L +N + + R L+LQ+HDEL+ EV+ + +++
Sbjct: 1889 IEERIKCEFPTSVAIMPTVSPIRKLRSNSREAQQRGGFLILQLHDELLYEVNINDLRQVA 1948
Query: 2147 SLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
++V++ ME A L+VPL VK++VGS WG L
Sbjct: 1949 TIVKEEMEQACQLIVPLPVKLKVGSAWGDL 1978
>gi|195113811|ref|XP_002001461.1| GI21961 [Drosophila mojavensis]
gi|193918055|gb|EDW16922.1| GI21961 [Drosophila mojavensis]
Length = 2181
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 311/849 (36%), Positives = 481/849 (56%), Gaps = 78/849 (9%)
Query: 456 ERKLDISSQGIDSITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSW-LPSEIC 514
++ L + + +++S SP + P + E+ P LK +S+W LP +
Sbjct: 220 KQNLGYTQKWTQNLSSMSPNQLHLSP-SCPAAKESPRPQQPVDLKALKQISAWNLPHSVL 278
Query: 515 SIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILMLRRLISTGKMA 573
+ YKK+G+ +++ WQVECL VL + NLVY A TSAGK+ V+EIL+L+ ++ GK
Sbjct: 279 AEYKKKGVVEMFDWQVECLSKPKVLFEHCNLVYSAPTSAGKTLVSEILLLKTVLERGKKV 338
Query: 574 LLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNR 633
LL+LP++S+ EK +L+ LL P G V ++G + +VA+CTIEKANS+VN+
Sbjct: 339 LLILPFISVVREKMFYLQDLLTPAGYRVEGFFGGYSPPGGFESINVAICTIEKANSIVNK 398
Query: 634 MLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGK 693
+LE+ +L ++G +V+DE+H+++D RGY+LELLL K+ Y +
Sbjct: 399 LLEQRKLEDLGTVVVDEVHLISDAGRGYILELLLAKILYMCRK----------------- 441
Query: 694 ADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRT 753
A +Q++ MSAT+ NV + WL A LY T+FRPV L+E IKVG+ IY ++ ++R
Sbjct: 442 --QALHIQLITMSATLANVQLLQQWLNAELYITDFRPVALKEMIKVGSKIYDNQLKLLRD 499
Query: 754 ILTAANLGG--KDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVH 811
+ A++ D DH+ +LC E + EG SV++FC S+ CE+ A ++ + I
Sbjct: 500 LSRTADVPALPNDGDHVAQLCIETLLEGCSVVVFCPSKDWCENLAVQLATAMHTL-IKSE 558
Query: 812 SSDSEFIDI---TSAID----ALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETC 864
S + + AID LR P GLD V+ + + A+HHAGLT EER++VE
Sbjct: 559 SDVGKRLRAQLNQQAIDEVKQQLRDIPTGLDSVMSKAISYACAFHHAGLTTEERDIVEAS 618
Query: 865 YRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGE 924
++ G ++++ ATSTL++GVNLPARRV+ R P G + YRQM GRAGRTG DT GE
Sbjct: 619 FKAGALKIIVATSTLSSGVNLPARRVLIRSPLFGGKQMSSLTYRQMIGRAGRTGKDTLGE 678
Query: 925 SMLICKPEEVKKIMGLLNESCPPLHSCLS-EDKNGMTHAILEVVAGGIVQTAEDIHRYVR 983
S+LIC + L+ P+ SCL +D + A+LEV++ G+ T +DI +
Sbjct: 679 SILICTDSNARIGRELVTAQLKPISSCLDLDDSTHLKRALLEVISSGVASTKQDIDSFFN 738
Query: 984 CTLLNSTKPFQDVVKSAQ---------DSLRWLCHRKF--LEWNEDTKL--YSTTPLGRA 1030
CTLL++ + V+ Q D+L +L +F L+ +E+T + Y T LG A
Sbjct: 739 CTLLSAQRKIAAAVQEEQEEDEAHFICDALDFLLEYEFIRLQTDEETDMQNYVATRLGAA 798
Query: 1031 AFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE---PDWELYYERFLE 1087
SS+ P + L++ +L ++R FVL S+LH VYL TP +V + DW LY + + +
Sbjct: 799 CLASSMPPTDGLLLFAELQKSRRCFVLESELHAVYLVTPYSVCYQLQDVDWLLYLDMWEK 858
Query: 1088 LSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDA 1147
LS + VG VGV E +L+R G KL+Y+L
Sbjct: 859 LSPAMKKVGELVGVKEAFLVRAMRG----------------QAKLDYKL----------- 891
Query: 1148 QTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG 1207
+++ KRFY AL L LV ETP+ V FK RGM+Q+LQ+ A FA +VS FC L
Sbjct: 892 --MQIHKRFYTALALQELVNETPINVVAHKFKCQRGMLQSLQQMASTFAGIVSAFCNSLQ 949
Query: 1208 WYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIV 1267
W L ++++F++R+ FG+ ++++L +P + RARAL+ AG+ + + +A A++ +
Sbjct: 950 WSTLALVVSQFKDRLYFGIHRDLIDLMRLPDLSHKRARALHDAGITSLVELASANVLALE 1009
Query: 1268 KALFESSSW 1276
+ LF+S S+
Sbjct: 1010 QVLFDSLSF 1018
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 265/535 (49%), Gaps = 53/535 (9%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGRWKNQMRRAAHNGCCRR 1711
D + +W+L PD S + + ++ + E A AN SGR + A + +
Sbjct: 1685 DPKVANWLLQPDKTLSFH-----NMCQQFAPECGALANLCGSGRGYSSFGLDASSAIMAK 1739
Query: 1712 VAQTRALCSVLWKL---------LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCL 1762
V + C + L + + +L++ +E+P+ L ME G
Sbjct: 1740 VRASIEACVTVHILNGQLENLERIGTGQLLKFFRELEMPIQMSLCHMECIGFPAKEHSLQ 1799
Query: 1763 QARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDK 1822
+ + ++ LE K Y L G +F+L + +A VL H K ST +
Sbjct: 1800 RLFQQMMATMKRLESKIYELHGSRFNLGSTQAVAKVL---------GLHRKANGRVSTSR 1850
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATG 1882
L+ + + PI +I +R L+ LL ++ + Q +HG + T TATG
Sbjct: 1851 QILEKI--DSPISQLILNYRKLSMLLAKSMQPLLKCC------QANRVHGQSI-TYTATG 1901
Query: 1883 RLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQI 1942
R+SM EPNLQ V ++ E + KI+ R F P E L++AD+ Q+
Sbjct: 1902 RISMSEPNLQNVAKDFHIELGKEQL----------KISCRSAFAPMDEKRCLISADFCQL 1951
Query: 1943 ELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGM 2002
E+R++AH S+D AL+ +++ D+FT IAA W E +V Q R+ TK++ YGI+YGM
Sbjct: 1952 EMRILAHLSQDKALLQVMNSTQ-DLFTAIAAHWNKIDESNVSEQLRNGTKQICYGIVYGM 2010
Query: 2003 GPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKI 2062
G +LSE L C+ EA+ + F ++PG+ ++ V GYVE++ GR+R+L I
Sbjct: 2011 GMRSLSEALKCTEQEAQMITEQFHLAYPGIKAYTMKVVKFARNNGYVETITGRRRYLDHI 2070
Query: 2063 KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR 2122
G + K++A+RQA+NS QGSAADI K A++ + + G Y+ LA N
Sbjct: 2071 NSGEVQLKTQAERQAINSTIQGSAADIAKSAILRMEKNL--GRYREKLGLAKN------A 2122
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
L+L +HDEL+ EV K+ ++ ME+ L VPL VK+++G +WG L+
Sbjct: 2123 VNLVLHLHDELIFEVPTDKAKKVAKVLSLTMENCVKLNVPLRVKLKIGRSWGELQ 2177
>gi|328724318|ref|XP_003248103.1| PREDICTED: DNA polymerase theta-like isoform 1 [Acyrthosiphon pisum]
Length = 1691
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 304/786 (38%), Positives = 454/786 (57%), Gaps = 59/786 (7%)
Query: 498 MLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSF 556
M D ++ SW LP +I YKKRGI ++PWQVECL DGVL RNLVY A TSAGK+
Sbjct: 1 MTDDLCNIDSWGLPDQIVENYKKRGIVSMFPWQVECLTSDGVLDGRNLVYSAPTSAGKTM 60
Query: 557 VAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKD 616
VAE+L ++ ++ K L++LP+VS+ EK + + L E + V + G+ +
Sbjct: 61 VAELLTMQTVLERDKKVLIILPFVSVVREKMLYFQELFEGTNKRVAGFMGSYTPTGGLRS 120
Query: 617 TSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGE 676
+VA+ TIEKAN ++NR++EE L ++G IV+DELHM+ D NRGYLLELLLTK++Y +
Sbjct: 121 VNVAIATIEKANGIINRLIEEDGLQDVGCIVVDELHMLGDSNRGYLLELLLTKIKYMS-- 178
Query: 677 GTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEY 736
K +QIVGMSAT+PN+ +A WL A LY T++RPVPL+EY
Sbjct: 179 ----------------KIRSNLSIQIVGMSATLPNLDILAKWLDATLYHTDYRPVPLKEY 222
Query: 737 IKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
+K+G +Y+ + + + + DPD + LC + + +G+S+LIFC ++K CES A
Sbjct: 223 LKIGKKVYNANNLSLSHTIEPSVVIKNDPDDVKYLCIDTILQGYSILIFCFTKKWCESLA 282
Query: 797 RHVSKFLKKFSINVHSSDSEFI-------DITSAIDALRRCPAGLDPVLEETLPSGVAYH 849
++ +K + S + + ++ LRRCP GL+ L +T+ GVA+H
Sbjct: 283 LEIASEIKHLGGDNKSKVGNDLRNQLNGESLGDVLEQLRRCPVGLETDLSKTISFGVAFH 342
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
HAGLT++ER+++E +++ +VRVL ATSTL++GVNLPARRVI R P ID +YRQ
Sbjct: 343 HAGLTMDERDIIEGAFKQNIVRVLIATSTLSSGVNLPARRVIVRSPHCHGFPIDILQYRQ 402
Query: 910 MAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL--SEDKNGMTHAILEVV 967
M GRAGR G+DT GES LIC E + + ++ PP+ SCL + + + A+LEVV
Sbjct: 403 MIGRAGRMGVDTAGESYLICNENERRMGEEIATQNLPPIKSCLGVGDFSSCLKRALLEVV 462
Query: 968 AGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPL 1027
AG +V T E+ Y++CTLL + + L+ L +F+ N D KL S T L
Sbjct: 463 AGCVVCTTEEAFEYIKCTLLYISNSENLNETPINECLKLLIEHQFVREN-DNKL-SPTNL 520
Query: 1028 GRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEP---DWELYYER 1084
G+A +S+ PE L ++ +L RAR+ FVL S+LHL+YL TP +V + DW
Sbjct: 521 GQACLAASVTPEIGLKLIKELDRARQNFVLDSELHLLYLITPYSVSDQIGHLDWFRVLHV 580
Query: 1085 FLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNML 1144
+ +L + VG+ +G+ E ++++ G S
Sbjct: 581 WEKLPHSMRKVGDMIGIEEGFIVKAMTGTSFSTS-------------------------- 614
Query: 1145 SDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCE 1204
SD L V +RFY L+L L+ E P+ V + ++G++Q+LQ+++ FA MV+ FC+
Sbjct: 615 SDKHKLAVHRRFYTTLLLHDLINEIPINTVVLKYGTSKGLLQSLQQSSSTFAGMVTQFCK 674
Query: 1205 RLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIS 1264
RLGW LE LI++F R+ FGV+ ++VEL + + AR LY AG++ +A A +
Sbjct: 675 RLGWSSLELLISQFSERLQFGVQRQLVELLRLDCLNSITARTLYNAGIQNIPELALADLR 734
Query: 1265 EIVKAL 1270
+ + L
Sbjct: 735 LVQRTL 740
Score = 233 bits (595), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 244/463 (52%), Gaps = 59/463 (12%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
T L S L L + + +IE+P+ +LA MEL+G G++ + ++ + + K +
Sbjct: 1288 TLKLMSTLRHQLKQIYIYKTFKDIEMPIQIILAKMELYGFGLNKKHLVELNDTVNKLMAN 1347
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
+ ++ + +G++F++ + + A V K+ TD H +
Sbjct: 1348 ISEQGFEQSGIRFNMQSTLEWAKV---------------KKKLKLTDSS-------SHLL 1385
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
V ++K R L+ L N + + ++ Q +H T + TGR+SM EPNLQ +
Sbjct: 1386 VELVKNWRKLSCLRNTHIN-------MYLTIQNDRVHCDS-NTYSNTGRISMHEPNLQNI 1437
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
++ + NE ++ R F+P + L++ D+ QIELR++AH SKD
Sbjct: 1438 PK--DYVIENE------------ILSLRSAFVPKSDQ-TLVSVDFCQIELRVLAHLSKDS 1482
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+ L+ P GDVF ++++W E V + R +TK++ YG+LYGMG TLSE LN +
Sbjct: 1483 ILLSALTSP-GDVFINLSSKWHNIPEIEVCDELRQKTKQVCYGMLYGMGTVTLSETLNIT 1541
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
+EA + I FK +FPGV + + V C G V++L GR R I K KS+ +
Sbjct: 1542 QDEAHKLISEFKRTFPGVNKYFNECVLQCRSMGLVKTLSGRIRHFPDINSEVPKIKSQVE 1601
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
RQA+N+I QGSAAD+ K+AMI + II GV L R L++ +HDEL+
Sbjct: 1602 RQAINTIIQGSAADVTKMAMIKVDKIINQGV-------------LNTRVHLVMHLHDELI 1648
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+V+ +V+ EA S + K ME+A L VPL VK++ GS+WG L+
Sbjct: 1649 FDVENTVLDEACSTIIKTMEAAVNLCVPLPVKLRKGSSWGDLK 1691
>gi|195450899|ref|XP_002072681.1| GK13557 [Drosophila willistoni]
gi|194168766|gb|EDW83667.1| GK13557 [Drosophila willistoni]
Length = 2080
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 339/959 (35%), Positives = 508/959 (52%), Gaps = 112/959 (11%)
Query: 397 CGAADTSEAMMFRDGVVSEKGS-VTHKSCQKIK-----FKCHH-DNTSRTEGISDVQEKD 449
CG+ EA + + V GS K+ K++ F C D + + D+
Sbjct: 96 CGSPSAFEAQICTEDVFGTDGSHEDSKTKGKLQLDESSFLCPALDEQASQQLQEDLMRSR 155
Query: 450 SVLIVHERKLDISSQGIDSITSDSPTNVIKKPVGNEK--SDEAGTPSSSGMLKDCLD--- 504
SVL+ E + +S TS + + K N++ S + T SS+ + LD
Sbjct: 156 SVLVNQEVEYRQASN-----TSPRLSQNLSKMSPNQQRVSPTSSTGSSASDANEALDVES 210
Query: 505 ---LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAE 559
+S+W LP + S YKK+G+ +++ WQVECL VL + RNLVY A TSAGK+ V+E
Sbjct: 211 LRSISAWNLPHSVLSEYKKKGVVQMFDWQVECLSKPQVLFEHRNLVYSAPTSAGKTLVSE 270
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
IL+L+ ++ K L++LP++S+ EK +L+ LL P G V ++G +V
Sbjct: 271 ILLLKTVLERSKKVLVILPFISVVREKMLYLQDLLTPSGYRVEGFFGGYTPPGGFDALNV 330
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
A+CTIEKAN++VN++LE+G+L IG +V+DE+H+++D RGY+LELLL K+ Y + +
Sbjct: 331 AICTIEKANAIVNKLLEQGKLDVIGTVVVDEIHLISDPGRGYILELLLAKILYMSRKH-- 388
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
A +Q++ MSAT+ NV + WL A LY TN+RPV L+E IKV
Sbjct: 389 -----------------ALQIQVITMSATLANVELLQSWLNAELYITNYRPVALQEMIKV 431
Query: 740 GNAIYSKKMDVVRTIL--TAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTAR 797
G IY + V+R I +A + G D DH+ +LC E + EG SV++FC S+ CE+ A
Sbjct: 432 GTQIYDNNLRVLRDITQKSAVPMLGNDCDHVAQLCIETLLEGCSVIVFCPSKDWCENLAV 491
Query: 798 HVSKFLKKF---------SINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAY 848
++ + ++ H + + ++ LR P GLD V+ + + A+
Sbjct: 492 QLATAIHTLIKSGSEVGQNLRTHLNPASIEEVK---QQLRDIPTGLDAVMSKAITYACAF 548
Query: 849 HHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYR 908
HHAGLT EER++VE ++ G ++VL ATSTL++GVNLPARRV+ R P G + YR
Sbjct: 549 HHAGLTTEERDIVEASFKGGAIKVLVATSTLSSGVNLPARRVLIRSPLFGGKQMSSLTYR 608
Query: 909 QMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTH---AILE 965
QM GRAGRTG DT GES+LIC + L+ P+ SCL D G TH A+LE
Sbjct: 609 QMIGRAGRTGRDTLGESILICNESNARIGKDLVTAQLKPITSCLEMD--GSTHLKRALLE 666
Query: 966 VVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSA----------------QDSLRWLCH 1009
V++ G+ T E+I+ +V CTLL++ K + D+L +L
Sbjct: 667 VISSGVASTKENINDFVNCTLLSAQKKLATPPTTTEKDEEEGDGEKWTDYISDALDFLME 726
Query: 1010 RKFLEWNED----TKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY 1065
+F+ D T Y T LG A SS+ P + LI+ +L ++R FVL S+LH VY
Sbjct: 727 YEFVRLQTDEEAETSNYVATRLGAACLASSMPPTDGLILFAELQKSRRCFVLESELHAVY 786
Query: 1066 LSTPINVEVE---PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLR 1122
L TP +V + DW LY + + +LS + VG +GV E +L+R G
Sbjct: 787 LVTPYSVCYQLQDLDWLLYLDMWEKLSPAMKKVGELIGVKEAFLVRAMRG---------- 836
Query: 1123 DSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVAR 1182
KL+Y+ +++ KRFY AL L LV ETP+ V FK R
Sbjct: 837 ------QTKLDYK-------------QMQIHKRFYTALALQELVNETPINVVAHKFKCQR 877
Query: 1183 GMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGS 1242
GM+Q LQ+ A FA +V+ FC L W L ++++F++R+ FG+ ++++L +P +
Sbjct: 878 GMLQGLQQMASTFAGIVTAFCNSLQWSTLALVVSQFKDRLFFGIHRDLIDLMRLPDLTHK 937
Query: 1243 RARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVL 1301
RARAL+ AG L +A A + + KALF S S+ Q + +N AR + +
Sbjct: 938 RARALHDAGFTNLLELAGADVLLLEKALFNSHSFDTAKQLENENAQEAAKRNMARNVFI 996
Score = 237 bits (604), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 238/448 (53%), Gaps = 37/448 (8%)
Query: 1730 ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSL 1789
+L++ ++E+P+ L +ME G E + ++ LE K Y L G +F+L
Sbjct: 1666 QLLKFFRDLEMPIQLSLCNMEFTGFPAKQESLQGLSQQMLSTMKKLEAKIYELHGSRFNL 1725
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
++ +A VL H K ST + L+ L + PI +I +R L+ +L
Sbjct: 1726 GSSQAVAKVL---------GLHRKASGKVSTSRQILEKL--DSPISQLIVGYRKLSTVLA 1774
Query: 1850 CTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG 1909
+ + Q ++G L + TATGR+SM EPNLQ V E
Sbjct: 1775 KNVQPLLKCC------QDNRVYGQSL-SYTATGRISMSEPNLQNVAKDFEI--------- 1818
Query: 1910 GNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFT 1969
N + D I+ R F+P L++AD+ Q+E+R++AH S+DPAL+ +++ P D+FT
Sbjct: 1819 -NLDSDKVNISCRSAFLPMDFKRCLISADFCQLEMRILAHLSQDPALLEVMNSPR-DLFT 1876
Query: 1970 MIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSF 2029
IAARW +E V R+ TK++ YGI+YGMG +L+E L C+ NEA+ + F ++
Sbjct: 1877 AIAARWNHMNESEVSENLRNGTKQICYGIVYGMGMRSLAESLKCTENEAQTVSEQFHQTY 1936
Query: 2030 PGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADI 2089
G+++++ V GYVE++ GR+R+L I G + K++A+RQA+NS QGSAADI
Sbjct: 1937 AGISAYIQKVVKFARNNGYVETITGRRRYLEHINSGELQIKNQAERQAINSTIQGSAADI 1996
Query: 2090 IKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLV 2149
K A++ + ++ Y+ + N L+L +HDEL+ EV K+ ++
Sbjct: 1997 AKSAILRMEKHLLR--YRERLGITEN------SVNLVLHLHDELIFEVPIDKAKKIAKVL 2048
Query: 2150 QKCMESAALLLVPLLVKIQVGSTWGSLE 2177
MES L VPL VK+++G +WG+L+
Sbjct: 2049 SLTMESCVKLSVPLKVKLKIGRSWGALK 2076
>gi|307177771|gb|EFN66768.1| ATP-dependent DNA helicase HEL308 [Camponotus floridanus]
Length = 1821
Score = 542 bits (1396), Expect = e-150, Method: Compositional matrix adjust.
Identities = 309/821 (37%), Positives = 478/821 (58%), Gaps = 76/821 (9%)
Query: 500 KDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFV 557
+D L+SW LP I Y RG+ ++ WQ+ECL V+Q R+NL+Y A TSAGK+ V
Sbjct: 201 QDRCKLASWGLPPNILQKYTARGVDCMFTWQMECLSNHQVMQERKNLIYSAPTSAGKTLV 260
Query: 558 AEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP--- 614
AEIL+++ ++ K + +LP+VS+ EK + + LL +G V + G GS+P
Sbjct: 261 AEILLIKTILERRKKVIFILPFVSVVREKMYYFKDLLSDIGIRVEGFMG----GSVPPGG 316
Query: 615 -KDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYA 673
T VA+ TIEKANSLVNR++EE LS +G ++IDELH++ D NRGYLLELLLTKL+Y
Sbjct: 317 FAATHVAIATIEKANSLVNRLMEENDLSSLGAVIIDELHLLGDPNRGYLLELLLTKLKYM 376
Query: 674 AGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPL 733
+Q++GMSAT+PN+ +A WL A LY+T FRP+PL
Sbjct: 377 TLRNDD------------------INIQLIGMSATLPNLVLLAKWLNAELYKTEFRPIPL 418
Query: 734 EEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCE 793
EY KV IY K++ VR + L KD D++++LC E + GHSVLIFC ++K CE
Sbjct: 419 NEYCKVETNIYDNKLNFVRKLEQLPELE-KDVDNMLQLCIETISAGHSVLIFCPTKKWCE 477
Query: 794 STARHVSKFLKKFSIN--------VHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSG 845
A ++ K + E I T ++ L+R P+GLD +L+ T+ G
Sbjct: 478 KLAEQIAAAFFKLGCKDTMLGEMLRKEINKELIQET--LEQLKRSPSGLDNILKNTISFG 535
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGT 905
+A+HHAGLT++ER+++E +R G +RVL ATSTL++GVNLPARRVI R P G + ++
Sbjct: 536 IAFHHAGLTMDERDIIEGAFRTGSLRVLIATSTLSSGVNLPARRVIIRSPLFGNNLLNTL 595
Query: 906 RYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILE 965
Y+QM GRAGR G D+ GES+LICK E + LL+ + P+ SCL+ D + A+LE
Sbjct: 596 TYKQMIGRAGRMGKDSAGESILICKSTERNAALSLLSATLDPIESCLN-DSMLLIRALLE 654
Query: 966 VVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKF--LEWNEDTKLYS 1023
VA ++ T +D+ Y+ CTLL+ K DV + +++R+L +F L+ E +
Sbjct: 655 AVASEVLYTVKDLELYINCTLLSFNKQ-SDVQTFSNEAMRFLLDNEFLLLQTTERESRWI 713
Query: 1024 TTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE---PDWEL 1080
TPLG+A +S+ P E L + ++L +AR FVL ++LH++YL TP++ + DW +
Sbjct: 714 ATPLGKACLAASIPPREGLFLFEELQKARRCFVLDTELHVIYLVTPLSAGCQIGTVDWMM 773
Query: 1081 YYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITS 1140
++E + +S ++ VG +GV E +++ G
Sbjct: 774 FHELWNTMSESERRVGKLIGVEERFVVSAIRG---------------------------- 805
Query: 1141 NNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVS 1200
++ ++L + +RFY AL L LV+E P+ VC+ + RG++Q LQ++A +A MV+
Sbjct: 806 --VIKPGKSLNIHRRFYSALALHDLVKEVPLHAVCKKYGCCRGVLQTLQQSAATYAGMVT 863
Query: 1201 VFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAE 1260
FC++LGW +E L+++FQ R+ FGV E+++L +P + G RAR+LYK G+ +A
Sbjct: 864 QFCKQLGWDCMELLVSQFQTRLQFGVCRELLDLLRLPMLNGLRARSLYKEGITCVADLAV 923
Query: 1261 ASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVL 1301
A+ + +AL+++ + +E + + + +N R + +
Sbjct: 924 ANELNVERALYKALPFESEKEYEGEYAFEAEKRNKMRTVFV 964
Score = 224 bits (572), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/316 (40%), Positives = 191/316 (60%), Gaps = 28/316 (8%)
Query: 1877 TSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLA 1936
T T TGR+SM EPNLQ V F +N ++ R F+P+ N I+L+
Sbjct: 1521 TCTVTGRVSMHEPNLQNVPKDFSFADNN------------FVLSVRMAFVPALGN-IMLS 1567
Query: 1937 ADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIY 1996
ADY Q+ELRL+ HFS+D L ++ +P GD+F IAA+W SE+ V + R +TK+L Y
Sbjct: 1568 ADYCQLELRLLTHFSQDSILCEIMRQP-GDIFKSIAAKWNNVSEEEVTIEMRQRTKQLCY 1626
Query: 1997 GILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRK 2056
G++YGMG +L+E L S +EA+E ++SF S++PG+ WL+ + H+ Y+ +L GR+
Sbjct: 1627 GMIYGMGVKSLAENLCISESEAQEFLESFMSTYPGIYKWLNNVLEEAHRDVYITTLLGRR 1686
Query: 2057 RFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSL---- 2112
R +K + +++A+RQAVN+ QGSAADI+K AMI+I I PDS++
Sbjct: 1687 RQFPDLKSTKSSTRAQAERQAVNTKVQGSAADIVKKAMISIEERIRCNF--PDSAIIFPE 1744
Query: 2113 AANFQMLKGRCR--------LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLL 2164
N + L+ R L+LQ+HDEL+ EV+ + +KE +++++ ME+ L VPL
Sbjct: 1745 MNNTRKLRSNSRDMQQRGGYLVLQLHDELLYEVNLADLKEVAAIIRESMENVCQLTVPLP 1804
Query: 2165 VKIQVGSTWGSLEPFQ 2180
VKI+VG WG L +Q
Sbjct: 1805 VKIRVGPAWGDLTDYQ 1820
>gi|198430821|ref|XP_002124758.1| PREDICTED: similar to DNA polymerase theta [Ciona intestinalis]
Length = 1711
Score = 541 bits (1395), Expect = e-150, Method: Compositional matrix adjust.
Identities = 317/837 (37%), Positives = 452/837 (54%), Gaps = 99/837 (11%)
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILML 563
L W LP I + Y G++ ++ WQ ECL + GVL +NL+ A TSAGK+ + EILM
Sbjct: 6 LQDWGLPECIRNNYTAVGLTDMFAWQAECLSLPGVLDGKNLIVSAPTSAGKTLIVEILMA 65
Query: 564 RRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCT 623
+R+ TGK ALLV P+VS+ EK HL + + G +V Y G +AVCT
Sbjct: 66 KRVYGTGKKALLVFPFVSLAREKMFHLRNIFDGTGLNVDGYMGGMSPPGGFSSVDIAVCT 125
Query: 624 IEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSS 683
IEKANS++N+++EE ++G++V+DELHMV D RGYLLELLLTK+RY + S
Sbjct: 126 IEKANSILNKLIEEKSTEQLGMVVVDELHMVGDDGRGYLLELLLTKIRYLKTKEISI--- 182
Query: 684 GENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAI 743
K P QI+G+SAT+ N+ A WL +YET FRPVPL Y+K+G I
Sbjct: 183 ---------KTPPC---QIIGLSATVTNLGLFATWLDGLVYETKFRPVPLSRYVKIGKEI 230
Query: 744 YSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFL 803
+ +K+ R +D D I LC E + HSVL+FC ++K CE+ A +++
Sbjct: 231 FDEKLIKCRDFQPQVTF-NEDDDDITALCYETICNNHSVLLFCPTKKWCENLANLIARNF 289
Query: 804 KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVET 863
++ ++ + ++ LRR PAGLDP+L T+P GVAYHHAGLT EER+++E+
Sbjct: 290 QQ----INGTKIATAGRAGILEQLRRSPAGLDPLLHATIPIGVAYHHAGLTTEERDILES 345
Query: 864 CYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKG 923
+R+ + VL ATSTL++GVNLPARRVI R P R ID Y+QM GRAGR G G
Sbjct: 346 GFRQSYILVLVATSTLSSGVNLPARRVIIRTPIFHRALIDLRVYQQMTGRAGRKGESDTG 405
Query: 924 ESMLICKPEEVKKIMGLLNESCPPLHSCL-----SEDKNGMTHAILEVVAGGIVQTAEDI 978
ES+LIC+ E + L PP+ SCL ++ M A+LEV+ G+V ++
Sbjct: 406 ESILICRTNERNQAKLLTLSDIPPVKSCLVGKLQNKSTVRMERAVLEVIGSGLVSNIHEV 465
Query: 979 HRYVRCTLLNST-------------------KPFQDVVKSAQDSLRWLCHRKFLEWNE-- 1017
Y++ + L++ K D+V + + WL + +F+ +
Sbjct: 466 MVYIQYSFLHAQLSSETTSSQRRRRSSNHELKLLDDIVHTC---VEWLVNNEFIYLQQCE 522
Query: 1018 -----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV 1072
+K T GRA+ SSL ++SL VL DL A F L S+LHL+Y TP+NV
Sbjct: 523 EKGQSMSKKVMATQFGRASLYSSLPTDQSLQVLADLQVASRAFALDSELHLIYQITPLNV 582
Query: 1073 ---EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAP--MRISSKLRDSTKG 1127
+ DW Y + L+ Q V VGV E L R+A G R S+KL+
Sbjct: 583 LNDWLFIDWSQYLSIYENLNGPHQRVAVLVGVEEGLLTRLASGGARGARFSTKLQ----- 637
Query: 1128 LHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQA 1187
Q + + KRFY ALIL ++QE P +C+ + RG++QA
Sbjct: 638 --------------------QKITIHKRFYAALILQDILQEVPFTSICDKYDCNRGVIQA 677
Query: 1188 LQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARAL 1247
LQ++A FA MV+ FC L W+ +E L +FQ+R+ FGV+ E+++LT IP + RAR L
Sbjct: 678 LQQSAASFAGMVTSFCHELAWWCMELLFNEFQSRLLFGVQRELLDLTRIPLLNNKRARGL 737
Query: 1248 YKAGLRTPLAIAEASISEI------------VKALFESSSWIAEAQRRVQLGVAKKI 1292
Y AG + +AEA+ SE+ K L+ ++W E + R +L V K I
Sbjct: 738 YLAGFTSCKLVAEANSSEVENILRNIHKFQSKKHLYGDNAW--EVEERKKLHVIKII 792
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 267/546 (48%), Gaps = 45/546 (8%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNG------ 1707
D I SW++ PD+ + L V+ S + W + R ++
Sbjct: 1203 DPMIASWLMDPDNIKQG---LFSLVEHYCSEHLYLFQDTKYDW--DVNRPSYTSVSSEKV 1257
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
CC + L L + L + + +E+P + +A +EL GI VD + R
Sbjct: 1258 CCVESIASYILMLQLEEQLSGMNMWQHFTGVEMPHMYCVALLELNGIEVDNSLLKRYRLE 1317
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L L++KA+ + G KF+L +++ VL+ L+L +
Sbjct: 1318 LHSASLALQEKAWKILGRKFNLSNPKEVSKVLFQELRLXXXXXXXXXXXXXXXXXY---- 1373
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
P I RT+ LN + I SL LH H T T TGR+ M
Sbjct: 1374 --------PCIMSWRTVNYALNKVILLINSLP-----PSCGRLH-HKCLTLTNTGRMIMS 1419
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPN+Q + +F ++ ++E C R+ F+ +L++ADYSQIELR++
Sbjct: 1420 EPNIQSIPK--QFSITKGSKSEADSEQSFC---LRNIFVAGNGK-LLISADYSQIELRIL 1473
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGR--SEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D LI + D+F IAA + S D V ++RD TK+ YGILYGMG
Sbjct: 1474 AHLSGDETLIAAFNSSGVDIFKSIAAMFYSEISSIDDVTDKQRDTTKQTCYGILYGMGAQ 1533
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
TL++Q+N S +A+ + SF +S+P V + + V+ C +KGY+E++ GR+R+L +IK
Sbjct: 1534 TLAQQMNTSETDAQNAMDSFMNSYPMVKVYFNRLVAQCKEKGYIETISGRRRYLPEIKSV 1593
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
K +S A+RQAVNS QGSAADI+K+A IH + + ++L N + L
Sbjct: 1594 RLKMRSHAERQAVNSTIQGSAADIVKMATYKIHCAVASLGW---NTLHQNTRSNTTDFFL 1650
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQADNYT 2185
+ +HDEL+ EVD + EAVS++++CM A + V L V+I+VG WG L + Y
Sbjct: 1651 VHHIHDELIYEVDEKKLHEAVSVIERCMVDAFPMSVKLAVRIKVGKLWGDL-----NKYE 1705
Query: 2186 NVVPDL 2191
N +P L
Sbjct: 1706 NFIPVL 1711
>gi|380012133|ref|XP_003690142.1| PREDICTED: DNA polymerase theta-like [Apis florea]
Length = 1769
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 313/813 (38%), Positives = 467/813 (57%), Gaps = 69/813 (8%)
Query: 485 EKSDEAGTPSSSGMLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRR- 542
EK+ E S +D LSSW LP + Y+ RG++ ++ WQVECL V+++
Sbjct: 79 EKTSEINPSISIIPTQDRCKLSSWGLPLNVLQKYEARGVTTMFAWQVECLSNQKVIEKNC 138
Query: 543 NLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVR 602
NLVY A TSAGK+ +AEILM++ ++ K + +LP+VS+ EK + + LL G V
Sbjct: 139 NLVYSAPTSAGKTLIAEILMIKTVLERRKKVIFILPFVSVVREKMYYFQDLLSDSGVRVE 198
Query: 603 SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
+ G T +A+ TIEKANSL+N ++EE L +G +++DELH+V D NRGYL
Sbjct: 199 GFMGGIAPSGGFATTHIAIATIEKANSLINHLMEENELINLGAVIVDELHLVGDPNRGYL 258
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAA 722
LELLLTKLRY D +Q++GMSAT+PN++ +A WL A
Sbjct: 259 LELLLTKLRYMTSR------------------DENINIQLIGMSATLPNLSLLAKWLDAE 300
Query: 723 LYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSV 782
LY+T FRP+PL E K+G IY K+ ++R+++ L D D I+ LC E + +GHSV
Sbjct: 301 LYKTEFRPIPLNEQCKIGRNIYDNKLCLIRSLIPMPELN-MDSDDILHLCIETISDGHSV 359
Query: 783 LIFCSSRKGCESTARHVSKFLKKFSI-NVH-------SSDSEFIDITSAIDALRRCPAGL 834
LIFCS++ CE A ++ K + N DSE I + ++ L+R P GL
Sbjct: 360 LIFCSTKNWCEKLAEQIAIAFCKLGLENTQLGKILRDQLDSELI--SETLEQLKRSPTGL 417
Query: 835 DPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQ 894
D VL+ T+ G+A+HHAGLT++ER+++E +R G +RVL ATSTL++GVNLPARRVI R
Sbjct: 418 DNVLKNTVSFGIAFHHAGLTMDERDIIEGSFRSGSLRVLVATSTLSSGVNLPARRVIIRS 477
Query: 895 PRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSE 954
P+ +D YRQM GRAGR G +T GES+LICKP E K L++ S P+ SCL E
Sbjct: 478 PKFAGKLLDSLTYRQMIGRAGRMGKNTAGESILICKPNEQKSAETLISASLEPIESCL-E 536
Query: 955 DKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFL- 1013
D + A+LE VA +V T D+ YV CTL++ + + D ++++L +FL
Sbjct: 537 DSAPLIRALLEAVASEVVYTPSDLELYVNCTLVSLSNEY-DSKDLWNKAIKFLVDNEFLL 595
Query: 1014 --EWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI- 1070
+ E + T G+A +S+ P E L +L++L +AR FVL ++LH++YL TP+
Sbjct: 596 LQKTEEGHNRWVATAFGKACLAASIAPREGLFLLEELQKARRCFVLDTELHVIYLVTPLT 655
Query: 1071 --NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGL 1128
N DW + E + LS ++ VG VGV E +L G
Sbjct: 656 SGNQIGSIDWMTFLELWKMLSESERRVGQLVGVEERFLTSAVRG---------------- 699
Query: 1129 HGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQAL 1188
++ + L + KRFY AL L LV+E P+ VC+ + RG++Q L
Sbjct: 700 --------------IVRQGKLLNIHKRFYTALALHDLVREIPLNSVCKKYGCCRGVLQTL 745
Query: 1189 QENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALY 1248
Q++A FA M++ FC++LGW +E L+++FQ R+ FGV E+++L +P + G RAR+LY
Sbjct: 746 QQSASTFAGMITQFCKQLGWDCMELLVSQFQTRLQFGVCRELLDLLRLPMLNGLRARSLY 805
Query: 1249 KAGLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
K G+ + +A A+ ++ +AL+++ + +E +
Sbjct: 806 KHGITSVADLAIANELDVERALYKALPFESEKE 838
Score = 253 bits (646), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 261/462 (56%), Gaps = 42/462 (9%)
Query: 1727 VSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMK 1786
+S L+ +IE+ ++ +LA MEL G+GV ++ +++++++ LE++AY L G K
Sbjct: 1338 LSPTLLYTFKDIEMKIIILLAYMELTGLGVCLKSLQDLSSVIREEMISLEERAYALCGKK 1397
Query: 1787 FSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAK 1846
F+ ++ ++ VL G KGK+ S +K L + +HPI ++ R L
Sbjct: 1398 FNFSSSKEVGEVL----------GLYKGKK-ISVNKAVLG--QSDHPISNLVMSWRKL-- 1442
Query: 1847 LLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNED 1906
N T I +S++ +HG+ + TST TGR+SM EPNLQ V +F
Sbjct: 1443 --NVTKSKII-YPLLSLAQHSSRIHGNCV-TSTLTGRISMHEPNLQNVPR--DF------ 1490
Query: 1907 IYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
N+E D I+ R FIP+ N I+L+ADY Q+ELR++AHFS+D L ++ KP GD
Sbjct: 1491 ----NSEDDSFTISVRMAFIPAIGN-IMLSADYCQLELRILAHFSRDTTLCNIMRKP-GD 1544
Query: 1967 VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFK 2026
+F IAA+W SE+ V + R TK+L YG++YGMG TL+E L+ +AKE ++SF
Sbjct: 1545 IFKNIAAKWNHVSENEVDDKMRQHTKQLCYGMIYGMGVKTLAENLSVDEVKAKEFLESFM 1604
Query: 2027 SSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSA 2086
+++PG++ WL+ + GY+ ++ R+R + N EKS+ +RQAVN+ QGSA
Sbjct: 1605 NAYPGISKWLNNVLEEARINGYITTILERRRMFPGLTSINPMEKSQTERQAVNTKVQGSA 1664
Query: 2087 ADIIKIAMINIHSIIVGGVYKPDSSLAAN-FQMLKGRCR--------LLLQVHDELVLEV 2137
ADI+K AM++I + + N + L+ R L+LQ+HDEL+ E
Sbjct: 1665 ADIVKKAMVDIEKRMRFEFSTSPPIMPVNSTRKLRSNSREAQQKGGYLVLQLHDELLYET 1724
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+ +++ ++V++ ME L VPL VK++VG WG+L +
Sbjct: 1725 NIYDLRQVATIVKESMEQVCQLTVPLPVKLKVGPAWGNLSEY 1766
>gi|195500591|ref|XP_002097437.1| GE24491 [Drosophila yakuba]
gi|194183538|gb|EDW97149.1| GE24491 [Drosophila yakuba]
Length = 2043
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 319/857 (37%), Positives = 473/857 (55%), Gaps = 95/857 (11%)
Query: 463 SQGIDSITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDL---SSW-LPSEICSIYK 518
SQ +++S SP + P N P ++ M D L S+W LP I + YK
Sbjct: 168 SQTTQNLSSMSPNQLRVSP--NSSRIREALPETAAMPPDLNSLKSVSAWNLPFSIQAEYK 225
Query: 519 KRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVL 577
K+G+ +++ WQVECL VL + NLVY A TSAGK+ V+EIL+L+ ++ GK ALL+L
Sbjct: 226 KKGVVQMFDWQVECLCKPRVLFEHCNLVYSAPTSAGKTLVSEILLLKTVLERGKKALLIL 285
Query: 578 PYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEE 637
P++S+ EK +L+ LL P G V +YG + VA+CTIEKANS+VN+++E+
Sbjct: 286 PFISVVREKMFYLQDLLTPAGYRVEGFYGGYTPPGGFESLHVAICTIEKANSIVNKLMEQ 345
Query: 638 GRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPA 697
G+L IG +V+DE+H+++D+ RGY+LELLL K+ Y + A
Sbjct: 346 GKLETIGTVVVDEVHLISDKGRGYILELLLAKILYMSRRN-------------------A 386
Query: 698 HGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTA 757
+Q++ MSAT+ NV + +WL A LY TN+RPV L+E IKVG I+ + ++R +
Sbjct: 387 LQIQVITMSATLENVELLKNWLDAELYITNYRPVALKEMIKVGTGIFDNHLKLLRNVSEQ 446
Query: 758 ANLGGK---DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLK---------- 804
+ + D D + LC E + EG SV++FC S+ CE+ A ++ +
Sbjct: 447 REIREELVNDSDDVAFLCIETLLEGCSVIVFCPSKDWCENLAVQLATAMHGLIKSGTELG 506
Query: 805 -KFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVET 863
+ N++ E + LR P GLD V+ + + A+HHAGLT EER++VE
Sbjct: 507 LRLRTNLNPRAIEEVK-----QQLRDIPTGLDAVMSKAVTYACAFHHAGLTTEERDIVEA 561
Query: 864 CYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKG 923
++ G ++VL ATSTL++GVNLPARRV+ R P G + YRQM GRAGRTG DT G
Sbjct: 562 SFKAGALKVLVATSTLSSGVNLPARRVLIRSPLFGGKQMSSLTYRQMIGRAGRTGKDTLG 621
Query: 924 ESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTH---AILEVVAGGIVQTAEDIHR 980
ES+LIC + ++ P+ SCL D G TH A+LEV++ G+ T +DI
Sbjct: 622 ESILICTESNARIGRDVVTAQLQPITSCLEMD--GSTHLKRALLEVISSGVASTKQDIDC 679
Query: 981 YVRCTLLNSTKPFQDVVKSA---------QDSLRWLCHRKFLEWNED----TKLYSTTPL 1027
+V CTLL++ K FQ K D+L +L +F+ +D T Y T L
Sbjct: 680 FVNCTLLSAQKAFQAKEKPPDQDSDSHYINDALDFLVEYEFVRLQKDEEEETTAYVATRL 739
Query: 1028 GRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE---PDWELYYER 1084
G A SS+ P + LI+ +L ++R FVL S+LH VYL TP +V + DW +Y +
Sbjct: 740 GAACLASSMPPTDGLILFAELQKSRRCFVLESELHAVYLVTPYSVCYQLQDLDWLIYLDM 799
Query: 1085 FLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNML 1144
+ +LS + VG VGV E +L++ G KL+Y+
Sbjct: 800 WEKLSPAMKKVGELVGVKEAFLVKAMRG----------------QTKLDYK--------- 834
Query: 1145 SDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCE 1204
++V KRFY AL L LV ETP+ V FK RGM+Q+LQ+ A FA +V+ FC
Sbjct: 835 ----QMQVHKRFYTALALQELVNETPINVVVHKFKCHRGMLQSLQQMASTFAGIVTAFCN 890
Query: 1205 RLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIS 1264
L W L ++++F++R+ FG+ ++++L +P V RARAL+ AGL + + +A A +
Sbjct: 891 SLQWSTLALIVSQFKDRLFFGIHRDLIDLMRLPDVSQKRARALFDAGLTSLVELAGADVL 950
Query: 1265 EIVKALFESSSWIAEAQ 1281
E+ K L+ S S+ + Q
Sbjct: 951 ELEKVLYNSLSFDSAKQ 967
Score = 218 bits (556), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 234/456 (51%), Gaps = 43/456 (9%)
Query: 1728 SEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKF 1787
S +L++ +IE+P+ L ME G + Q + +R LE K Y G +F
Sbjct: 1627 SGQLLKFFHDIEMPIQLTLCHMEFVGFPAQQQRLQQLYQKMVAVMRKLETKIYEQHGSRF 1686
Query: 1788 SLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKL 1847
+L ++ +A VL H K +T + L+ + PI +I +R +A L
Sbjct: 1687 NLGSSQTVAKVL---------GLHRKANGRVTTSRQVLE--KINSPISQLILGYRKVAGL 1735
Query: 1848 LNCTLGSI---CSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN 1904
L ++ + C RI HG + T TATGR+SM EPNLQ V ++ +
Sbjct: 1736 LAKSIQPLLKCCEADRI---------HGQSI-TYTATGRISMTEPNLQNVAKEFCIQVGS 1785
Query: 1905 EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
D +I R F+P E+ LL+AD+ Q+E+R++AH S+D AL+ +++ P
Sbjct: 1786 ----------DALRIACRLPFVPKDEDRCLLSADFCQLEMRILAHMSQDKALLEVMNSPQ 1835
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
D+F IAA W E V R+ TK + YGI+YGMG +L+E LNCS EA+ +
Sbjct: 1836 -DLFIAIAAHWNKIEESEVSQDLRNSTKHVCYGIVYGMGMRSLAESLNCSEQEARMISEQ 1894
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
F ++ G+ + V +G+VE++ GR+R+L I + K++A+RQA+NS QG
Sbjct: 1895 FHQAYKGIREYTSRVVKFARNQGFVETITGRRRYLDNINSDEEQLKNQAERQAINSTIQG 1954
Query: 2085 SAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKE 2144
SAADI K A++ + + + L Q + L++ +HDEL+ EV + K+
Sbjct: 1955 SAADIAKSAILKMEK----NIERYRDKLVLGDQSVD----LIMHLHDELIFEVPAAKAKK 2006
Query: 2145 AVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
++ ME+ L VPL VK+++G +WG L+ F+
Sbjct: 2007 IAKVLSLTMENCVKLSVPLKVKLRIGRSWGELQEFR 2042
>gi|17933644|ref|NP_524333.1| mutagen-sensitive 308 [Drosophila melanogaster]
gi|2340084|gb|AAB67306.1| Mus308 [Drosophila melanogaster]
gi|7299675|gb|AAF54858.1| mutagen-sensitive 308 [Drosophila melanogaster]
gi|201065649|gb|ACH92234.1| FI03732p [Drosophila melanogaster]
Length = 2059
Score = 538 bits (1385), Expect = e-149, Method: Compositional matrix adjust.
Identities = 334/896 (37%), Positives = 489/896 (54%), Gaps = 105/896 (11%)
Query: 429 FKCHHDNTSRTEGI-SDVQEKDSVLIVHERKLDISSQGIDSITSDSPTNVIKKPVGNEKS 487
F C + +E + D+ SVL E +IS Q +++S SP + P N
Sbjct: 134 FLCPAQDEEASEQLKEDILHSHSVLAKQEFYQEIS-QVTQNLSSMSPNQLRVSP--NSSR 190
Query: 488 DEAGTPSSSGM---LKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRR 542
P M L +S+W LP I + YKK+G+ ++ WQVECL +L +
Sbjct: 191 IREAMPERPAMPLDLNTLRSISAWNLPMSIQAEYKKKGVVDMFDWQVECLSKPRLLFEHC 250
Query: 543 NLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVR 602
NLVY A TSAGK+ V+EILML+ ++ GK LL+LP++S+ EK +++ LL P G V
Sbjct: 251 NLVYSAPTSAGKTLVSEILMLKTVLERGKKVLLILPFISVVREKMFYMQDLLTPAGYRVE 310
Query: 603 SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
+YG + VA+CTIEKANS+VN+++E+G+L IG++V+DE+H+++D+ RGY+
Sbjct: 311 GFYGGYTPPGGFESLHVAICTIEKANSIVNKLMEQGKLETIGMVVVDEVHLISDKGRGYI 370
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQI--VGMSATMPNVAAVADWLQ 720
LELLL K+ Y + +GLQI + MSAT+ NV + WL
Sbjct: 371 LELLLAKILYMSRR---------------------NGLQIQVITMSATLENVQLLQSWLD 409
Query: 721 AALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGG---KDPDHIVELCDEVVQ 777
A LY TN+RPV L+E IKVG IY ++ +VR + L D D + LC E +
Sbjct: 410 AELYITNYRPVALKEMIKVGTVIYDHRLKLVRDVAKQKVLLKGLENDSDDVALLCIETLL 469
Query: 778 EGHSVLIFCSSRKGCE------STARHV-----SKFLKKFSINVHSSDSEFIDITSAIDA 826
EG SV++FC S+ CE +TA HV + ++ N++ I
Sbjct: 470 EGCSVIVFCPSKDWCENLAVQLATAIHVQIKSETVLGQRLRTNLNPRA-----IAEVKQQ 524
Query: 827 LRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLP 886
LR P GLD V+ + + A+HHAGLT EER+++E ++ G ++VL ATSTL++GVNLP
Sbjct: 525 LRDIPTGLDGVMSKAITYACAFHHAGLTTEERDIIEASFKAGALKVLVATSTLSSGVNLP 584
Query: 887 ARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMG--LLNES 944
ARRV+ R P G + YRQM GRAGR G DT GES+LIC E+ MG L+
Sbjct: 585 ARRVLIRSPLFGGKQMSSLTYRQMIGRAGRMGKDTLGESILICN--EINARMGRDLVVSE 642
Query: 945 CPPLHSCLSEDKNGMTH---AILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSA- 1000
P+ SCL D +G TH A+LEV++ G+ T EDI +V CTLL++ K F K
Sbjct: 643 LQPITSCL--DMDGSTHLKRALLEVISSGVANTKEDIDFFVNCTLLSAQKAFHAKEKPPD 700
Query: 1001 --------QDSLRWLCHRKF--LEWNE--DTKLYSTTPLGRAAFGSSLCPEESLIVLDDL 1048
D+L +L +F L+ NE +T +Y T LG A SS+ P + LI+ +L
Sbjct: 701 EESDANYINDALDFLVEYEFVRLQRNEERETAVYVATRLGAACLASSMPPTDGLILFAEL 760
Query: 1049 SRAREGFVLASDLHLVYLSTPINVEVE---PDWELYYERFLELSALDQSVGNQVGVSEPY 1105
++R FVL S+LH VYL TP +V + DW LY + +LS+ + VG VGV + +
Sbjct: 761 QKSRRSFVLESELHAVYLVTPYSVCYQLQDIDWLLYVHMWEKLSSPMKKVGELVGVRDAF 820
Query: 1106 LMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRL 1165
L + G KL+Y+ +++ KRFY+AL L L
Sbjct: 821 LYKALRG----------------QTKLDYK-------------QMQIHKRFYIALALEEL 851
Query: 1166 VQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFG 1225
V ETP+ V +K RGM+Q+LQ+ A FA +V+ FC L W L ++++F++R+ FG
Sbjct: 852 VNETPINVVVHKYKCHRGMLQSLQQMASTFAGIVTAFCNSLQWSTLALIVSQFKDRLFFG 911
Query: 1226 VRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
+ ++++L IP + RARAL+ AG+ + + +A A E+ K L+ S S+ + Q
Sbjct: 912 IHRDLIDLMRIPDLSQKRARALFDAGITSLVELAGADPVELEKVLYNSISFDSAKQ 967
Score = 221 bits (564), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 234/451 (51%), Gaps = 43/451 (9%)
Query: 1730 ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSL 1789
+L++ +IE+P+ L MEL G + Q + ++ +E K Y G +F+L
Sbjct: 1645 DLLKFFHDIEMPIQLTLCQMELVGFPAQKQRLQQLYQRMVAVMKKVETKIYEQHGSRFNL 1704
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
++ +A VL H K K +T + L+ L PI +I +R L+ LL
Sbjct: 1705 GSSQAVAKVL---------GLHRKAKGRVTTSRQVLEKL--NSPISHLILGYRKLSGLLA 1753
Query: 1850 CTLGSI---CSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNED 1906
++ + C RI HG + T TATGR+SM EPNLQ V ++ ++
Sbjct: 1754 KSIQPLMECCQADRI---------HGQSI-TYTATGRISMTEPNLQNVAKEFSIQVGSDV 1803
Query: 1907 IYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
++ I+ R F+P+ E+ LL+AD+ Q+E+R++AH S+D AL+ ++ K D
Sbjct: 1804 VH----------ISCRSPFMPTDESRCLLSADFCQLEMRILAHMSQDKALLEVM-KSSQD 1852
Query: 1967 VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFK 2026
+F IAA W E V R+ TK++ YGI+YGMG +L+E LNCS EA+ F
Sbjct: 1853 LFIAIAAHWNKIEESEVTQDLRNSTKQVCYGIVYGMGMRSLAESLNCSEQEARMISDQFH 1912
Query: 2027 SSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSA 2086
++ G+ + V+ KG+VE++ GR+R+L I K++A+RQAVNS QGSA
Sbjct: 1913 QAYKGIRDYTTRVVNFARSKGFVETITGRRRYLENINSDVEHLKNQAERQAVNSTIQGSA 1972
Query: 2087 ADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAV 2146
ADI K A++ + I Y+ +L N L++ +HDEL+ EV K+
Sbjct: 1973 ADIAKNAILKMEKNI--ERYREKLALGDN------SVDLVMHLHDELIFEVPTGKAKKIA 2024
Query: 2147 SLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
++ ME+ L VPL VK+++G +WG +
Sbjct: 2025 KVLSLTMENCVKLSVPLKVKLRIGRSWGEFK 2055
>gi|60678001|gb|AAX33507.1| LP14642p [Drosophila melanogaster]
Length = 2059
Score = 538 bits (1385), Expect = e-149, Method: Compositional matrix adjust.
Identities = 334/896 (37%), Positives = 489/896 (54%), Gaps = 105/896 (11%)
Query: 429 FKCHHDNTSRTEGI-SDVQEKDSVLIVHERKLDISSQGIDSITSDSPTNVIKKPVGNEKS 487
F C + +E + D+ SVL E +IS Q +++S SP + P N
Sbjct: 134 FLCPAQDEEASEQLKEDILHSHSVLAKQEFYQEIS-QVTQNLSSMSPNQLRVSP--NSSR 190
Query: 488 DEAGTPSSSGM---LKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRR 542
P M L +S+W LP I + YKK+G+ ++ WQVECL +L +
Sbjct: 191 IREAMPERPAMPLDLNTLRSISAWNLPMSIQAEYKKKGVVDMFDWQVECLSKPRLLFEHC 250
Query: 543 NLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVR 602
NLVY A TSAGK+ V+EILML+ ++ GK LL+LP++S+ EK +++ LL P G V
Sbjct: 251 NLVYSAPTSAGKTLVSEILMLKTVLERGKKVLLILPFISVVREKMFYMQDLLTPAGYRVE 310
Query: 603 SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
+YG + VA+CTIEKANS+VN+++E+G+L IG++V+DE+H+++D+ RGY+
Sbjct: 311 GFYGGYTPPGGFESLHVAICTIEKANSIVNKLMEQGKLETIGMVVVDEVHLISDKGRGYI 370
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQI--VGMSATMPNVAAVADWLQ 720
LELLL K+ Y + +GLQI + MSAT+ NV + WL
Sbjct: 371 LELLLAKILYMSRR---------------------NGLQIQVITMSATLENVQLLQSWLD 409
Query: 721 AALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGG---KDPDHIVELCDEVVQ 777
A LY TN+RPV L+E IKVG IY ++ +VR + L D D + LC E +
Sbjct: 410 AELYITNYRPVALKEMIKVGTVIYDHRLKLVRDVAKQKVLLKGLENDSDDVALLCIETLL 469
Query: 778 EGHSVLIFCSSRKGCE------STARHV-----SKFLKKFSINVHSSDSEFIDITSAIDA 826
EG SV++FC S+ CE +TA HV + ++ N++ I
Sbjct: 470 EGCSVIVFCPSKDWCENLAVQLATAIHVQIKSETVLGQRLRTNLNPRA-----IAEVKQQ 524
Query: 827 LRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLP 886
LR P GLD V+ + + A+HHAGLT EER+++E ++ G ++VL ATSTL++GVNLP
Sbjct: 525 LRDIPTGLDGVMSKAITYACAFHHAGLTTEERDIIEASFKAGALKVLVATSTLSSGVNLP 584
Query: 887 ARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMG--LLNES 944
ARRV+ R P G + YRQM GRAGR G DT GES+LIC E+ MG L+
Sbjct: 585 ARRVLIRSPLFGGKQMSSLTYRQMIGRAGRMGKDTLGESILICN--EINARMGRDLVVSE 642
Query: 945 CPPLHSCLSEDKNGMTH---AILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSA- 1000
P+ SCL D +G TH A+LEV++ G+ T EDI +V CTLL++ K F K
Sbjct: 643 LQPITSCL--DMDGSTHLKRALLEVISSGVANTKEDIDFFVNCTLLSAQKAFHAKEKPPD 700
Query: 1001 --------QDSLRWLCHRKF--LEWNE--DTKLYSTTPLGRAAFGSSLCPEESLIVLDDL 1048
D+L +L +F L+ NE +T +Y T LG A SS+ P + LI+ +L
Sbjct: 701 EESDANYINDALDFLVEYEFVRLQRNEERETAVYVATRLGAACLASSMPPTDGLILFAEL 760
Query: 1049 SRAREGFVLASDLHLVYLSTPINVEVE---PDWELYYERFLELSALDQSVGNQVGVSEPY 1105
++R FVL S+LH VYL TP +V + DW LY + +LS+ + VG VGV + +
Sbjct: 761 QKSRRSFVLESELHAVYLVTPYSVCYQLQDIDWLLYVHMWEKLSSPMKKVGELVGVRDAF 820
Query: 1106 LMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRL 1165
L + G KL+Y+ +++ KRFY+AL L L
Sbjct: 821 LYKALRG----------------QTKLDYK-------------QMQIHKRFYIALALEEL 851
Query: 1166 VQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFG 1225
V ETP+ V +K RGM+Q+LQ+ A FA +V+ FC L W L ++++F++R+ FG
Sbjct: 852 VNETPINVVVHKYKCHRGMLQSLQQMASTFAGIVTAFCNSLQWSTLALIVSQFKDRLFFG 911
Query: 1226 VRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
+ ++++L IP + RARAL+ AG+ + + +A A E+ K L+ S S+ + Q
Sbjct: 912 IHRDLIDLMRIPDLSQKRARALFDAGITSLVELAGADPVELEKVLYNSISFDSAKQ 967
Score = 224 bits (572), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/451 (33%), Positives = 235/451 (52%), Gaps = 43/451 (9%)
Query: 1730 ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSL 1789
+L++ +IE+P+ L MEL G + Q + ++ +E K Y G +F+L
Sbjct: 1645 DLLKFFHDIEMPIQLTLCQMELVGFPAQKQRLQQLYQRMVAVMKKVETKIYEQHGSRFNL 1704
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
++ +A VL H K K +T + L+ L PI +I +R L+ LL
Sbjct: 1705 GSSQAVAKVL---------GLHRKAKGRVTTSRQVLEKL--NSPISHLILGYRKLSGLLA 1753
Query: 1850 CTLGSI---CSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNED 1906
++ + C RI HG + T TATGR+SM EPNLQ V ++ ++
Sbjct: 1754 KSIQPLMECCQADRI---------HGQSI-TYTATGRISMTEPNLQNVAKEFSIQVGSDV 1803
Query: 1907 IYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
++ I+ R F+P+ E+ LL+AD+ Q+E+R++AH S+D AL+ ++ K D
Sbjct: 1804 VH----------ISCRSPFMPTDESRCLLSADFCQLEMRILAHMSQDKALLEVM-KSSQD 1852
Query: 1967 VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFK 2026
+F IAA W E V R+ TK++ YGI+YGMG +L+E LNCS EA+ F
Sbjct: 1853 LFIAIAAHWNKIEESEVTQDLRNSTKQVCYGIVYGMGMRSLAESLNCSEQEARMISDQFH 1912
Query: 2027 SSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSA 2086
++ G+ + V+ H KG+VE++ GR+R+L I K++A+RQAVNS QGSA
Sbjct: 1913 QAYKGIRDYTTRVVNFAHSKGFVETITGRRRYLENINSDVEHLKNQAERQAVNSTIQGSA 1972
Query: 2087 ADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAV 2146
ADI K A++ + I Y+ +L N L++ +HDEL+ EV K+
Sbjct: 1973 ADIAKNAILKMEKNI--ERYREKLALGDN------SVDLVMHLHDELIFEVPTGKAKKIA 2024
Query: 2147 SLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
++ ME+ L VPL VK+++G +WG +
Sbjct: 2025 KVLSLTMENCVKLSVPLKVKLRIGRSWGEFK 2055
>gi|195399626|ref|XP_002058420.1| GJ14321 [Drosophila virilis]
gi|194141980|gb|EDW58388.1| GJ14321 [Drosophila virilis]
Length = 2086
Score = 537 bits (1384), Expect = e-149, Method: Compositional matrix adjust.
Identities = 310/829 (37%), Positives = 460/829 (55%), Gaps = 86/829 (10%)
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILM 562
+SSW LP + YKK+G+ +++ WQVECL VL + RNLVY A TSAGK+ V+EIL+
Sbjct: 245 ISSWNLPHSVLGEYKKKGVVRMFDWQVECLSKPSVLFEHRNLVYSAPTSAGKTLVSEILL 304
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVC 622
L+ ++ K LL+LP++S+ EK +L+ LL P G V ++G + VA+C
Sbjct: 305 LKTVLERRKKVLLILPFISVVREKMFYLQDLLTPAGYRVEGFFGGYTPPGGFESIHVAIC 364
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKANS+VN++LE+ +L E+G +++DE+H+++D RGY+LELLL K+ Y +
Sbjct: 365 TIEKANSIVNKLLEQAKLDELGTVIVDEVHLISDPGRGYILELLLAKILYMSRRQ----- 419
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
A +Q++ MSAT+ NV + WL A LY T++RPV L+E IKVG
Sbjct: 420 --------------ALQIQVITMSATLANVELLQRWLSAELYVTDYRPVALQEMIKVGTK 465
Query: 743 IYSKKMDVVRTILTAANLGG--KDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVS 800
IY ++ +R + A L G D D + +LC E + EG SV++FC S+ CE+ A ++
Sbjct: 466 IYDNQLRFLRDVSRNAELPGLANDSDQVAQLCIETLLEGCSVVVFCPSKDWCENLAVQLA 525
Query: 801 KFLKKFSINVHSSDSEFIDIT------SAID----ALRRCPAGLDPVLEETLPSGVAYHH 850
+ SDS+ A+D LR P GLD V+ + + A+HH
Sbjct: 526 TAMHALI----KSDSQLAQKLRGQLNREALDDVKRQLRDIPTGLDSVMSKAISYACAFHH 581
Query: 851 AGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQM 910
AGLT EER++VE ++ G ++V+ ATSTL++GVNLPARRV+ R P G + YRQM
Sbjct: 582 AGLTTEERDIVEASFKAGALKVIVATSTLSSGVNLPARRVLIRSPLFGGKPMSSLTYRQM 641
Query: 911 AGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTH---AILEVV 967
GRAGRTG DT GES+LIC + L+ P+ SCL D +G TH A+LEV+
Sbjct: 642 IGRAGRTGRDTLGESILICSESNARIGRELVTAQLKPIRSCL--DLDGSTHLKRALLEVI 699
Query: 968 AGGIVQTAEDIHRYVRCTLLNSTKPFQD--------VVKSAQDSLRWLCHRKFLEWNED- 1018
+ G+ T +DI + CTLL++ + V D+L +L +F+ D
Sbjct: 700 SSGVASTRQDIDSFFNCTLLSAQSRGEQEEEHDPEAVDHYISDALDFLIEYEFIRLQTDE 759
Query: 1019 ---TKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEV- 1074
T+ Y T LG A SS+ P + LI+ +L ++R FVL S+LH VYL TP +V
Sbjct: 760 EAETENYMATRLGAACLASSMPPTDGLILFAELQKSRRCFVLESELHAVYLVTPYSVCYQ 819
Query: 1075 --EPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKL 1132
E DW LY + + +LS + VG VGV E +L+R G KL
Sbjct: 820 LQEVDWLLYLDMWEKLSPAMKKVGELVGVKEAFLVRAMRG----------------QAKL 863
Query: 1133 EYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENA 1192
+Y+L +++ KRFY AL L LV ETP+ V FK RGM+Q LQ+ A
Sbjct: 864 DYKL-------------MQIHKRFYTALALQELVNETPINVVAHKFKCQRGMLQGLQQMA 910
Query: 1193 GRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGL 1252
FA +V+ FC L W L ++++F++R+ FG+ ++++L +P + RARAL+ AG+
Sbjct: 911 STFAGIVTAFCNSLQWSTLSLVVSQFKDRLYFGIHRDLIDLMRLPDLSHKRARALHDAGI 970
Query: 1253 RTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVL 1301
+ + +A A++ + K L+ S S+ Q + + +N AR +
Sbjct: 971 TSLVELAGANVLAVEKVLYNSLSFDLSKQHEHENALEAAQRNTARNFFI 1019
Score = 233 bits (594), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 237/451 (52%), Gaps = 43/451 (9%)
Query: 1730 ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL---RYLEKKAYTLAGMK 1786
+L++ +E+P+ L +ME G + + + LLQ+ L + LE K + L G +
Sbjct: 1672 QLLKFFRELEMPIQMSLCNMECLGFPAQEQ---RLQRLLQQMLATMKKLEVKIFELHGSR 1728
Query: 1787 FSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAK 1846
F+L + +A VL H K ST + L+ L + PI +I +HR L+
Sbjct: 1729 FNLGSTQAVAKVL---------GLHRKANGRISTSRQILEKL--DSPISQLILDHRKLSM 1777
Query: 1847 LLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNED 1906
+L + + Q +HG + T TATGR+SM EPNLQ V + E
Sbjct: 1778 VLAKNMQPLLK------CCQANRVHGQSI-TYTATGRISMSEPNLQNVAKDFLVDLGQEK 1830
Query: 1907 IYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
I I+ R F+ S E LL+AD+ Q+E+R++AH S+D AL+ +++ P D
Sbjct: 1831 I----------NISCRSAFVSSNEKHCLLSADFCQLEMRILAHLSQDKALLKVMNSPQ-D 1879
Query: 1967 VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFK 2026
+FT IAA W +E V Q R+ TK++ YGI+YGMG +L+E L C+ EA+ + F
Sbjct: 1880 LFTAIAAHWNKIAESDVSEQLRNGTKQICYGIVYGMGMRSLAESLKCTEQEAQMISEQFH 1939
Query: 2027 SSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSA 2086
++ G+ ++ V GYVE++ GR+R+L I G + K++A+RQA+NS QGSA
Sbjct: 1940 LAYAGIKAYASKVVKFARNNGYVETITGRRRYLDHINSGEPQLKNQAERQAINSTIQGSA 1999
Query: 2087 ADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAV 2146
ADI K A++ + I Y+ LA N L+L +HDEL+ EV K+
Sbjct: 2000 ADIAKSAILRMEKNI--ARYREKLGLAEN------AVNLVLHLHDELIFEVPADKAKKVA 2051
Query: 2147 SLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
++ ME+ L VPL VK+++G +WG L+
Sbjct: 2052 KVLSLTMENCVKLNVPLRVKLKIGRSWGELQ 2082
>gi|194742333|ref|XP_001953657.1| GF17871 [Drosophila ananassae]
gi|190626694|gb|EDV42218.1| GF17871 [Drosophila ananassae]
Length = 2135
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 318/875 (36%), Positives = 479/875 (54%), Gaps = 100/875 (11%)
Query: 450 SVLIVHERKLDISSQGIDSITSDSPTNVIKKPVGNEKSDEAGTPSSSGM-----LKDCLD 504
S ++ + +L S+ +++S SP + P + D A SS L+
Sbjct: 183 SCMVAKQGELHDVSKITQNLSSMSPGQLKLSPDSFSQVDYAQKKKSSAAPVPVDLQSLKS 242
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILM 562
+ +W LP I ++YK++G+ +++ WQVECL VL NLVY A TSAGK+ V+EIL+
Sbjct: 243 IFAWNLPPSISAVYKRKGVVQMFDWQVECLSKRSVLFDHCNLVYSAPTSAGKTLVSEILL 302
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYG--NQGGGSLPKDTSVA 620
++ ++ K LL+LP++S+ EK +L+ LL P G V ++G N GG ++ VA
Sbjct: 303 IKTVLERRKKVLLILPFISVVREKMFYLQDLLVPAGYRVEGFFGGYNPPGGF--ENIDVA 360
Query: 621 VCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSD 680
+CTIEKANS+VN++LE+ +L IG +V+DE+H+++D+ RGY+LELLL K+ Y + +
Sbjct: 361 ICTIEKANSIVNKLLEQDKLDSIGTVVVDEVHLISDKGRGYILELLLAKILYMSRRKSLQ 420
Query: 681 SSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVG 740
+Q++ MSAT+ NV + WL A LY T++RPV L+E IKVG
Sbjct: 421 -------------------IQVITMSATLANVQLLQRWLDAELYITDYRPVALKEMIKVG 461
Query: 741 NAIYSKKMDVVRTILTAANLG---GKDPDHIVELCDEVVQEGHSVLIFCSSRKGCE---- 793
++ ++ VR + + L G D DH+ +LC E + EG SV++FC S+ CE
Sbjct: 462 TKVFDNQLQYVRDVSQQSELQQALGNDSDHVAQLCIETLLEGCSVIVFCPSKDWCENLAV 521
Query: 794 --STARHV-----SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGV 846
+TA H S ++ N+ E + LR P GLD V+ + +
Sbjct: 522 QLATAMHALIKSGSDLGRRLRSNLSPEALENVK-----QQLRDIPTGLDAVMSKAVTCAC 576
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
A+HHAGLT EER++VET ++ G ++VL ATSTL++GVNLPARRV+ R P G +
Sbjct: 577 AFHHAGLTTEERDIVETAFKSGALKVLVATSTLSSGVNLPARRVLIRSPLFGGKQMSSLT 636
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTH---AI 963
YRQM GRAGRTG DT GES+LIC + L+ P+ SCL D G TH A+
Sbjct: 637 YRQMIGRAGRTGKDTLGESILICTESNARIGRELVTAQLQPISSCLEMD--GSTHLKRAL 694
Query: 964 LEVVAGGIVQTAEDIHRYVRCTLLNSTK-------PFQDVVKSA---QDSLRWLCHRKFL 1013
LEV++ G+ T +DI R+V CTLL++ K P D + D+L +L +F+
Sbjct: 695 LEVISSGVATTRQDIDRFVNCTLLSAQKAMKNDENPVADEESDSNYINDALDFLIEYEFI 754
Query: 1014 EWNED----TKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTP 1069
D T Y T LG A SS+ P + L++ +L ++R FVL S+LH VYL TP
Sbjct: 755 RLQTDEETETSAYVATRLGAACLASSMPPTDGLLLFAELQKSRRCFVLESELHAVYLVTP 814
Query: 1070 INVEVE---PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTK 1126
V + DW +Y + + +L+ + VG VGV E +L++ G
Sbjct: 815 YTVCYQLQDLDWLIYLDMWEKLNPAMKKVGELVGVKESFLVKAMRG-------------- 860
Query: 1127 GLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQ 1186
L+Y+ ++V KRFY AL L LV ETP+ V FK RGM+Q
Sbjct: 861 --QTNLDYK-------------QMQVHKRFYTALALQELVNETPINVVVHKFKCHRGMLQ 905
Query: 1187 ALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARA 1246
LQ+ A FA +V+ FC L W L ++++F++R+ FG+ +++++L +P + RARA
Sbjct: 906 TLQQMASTFAGIVTAFCTSLQWSTLALIVSEFRDRLYFGIHSDLIDLMRLPDLTQKRARA 965
Query: 1247 LYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
L+ AG + + +A A + + K LF S S+ + Q
Sbjct: 966 LFDAGFKNLVQLAGADVLALEKVLFNSLSFDSAKQ 1000
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 255/473 (53%), Gaps = 48/473 (10%)
Query: 1713 AQTRALCSV-----LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
AQ A SV K L + I+ + E+PL +LA ME+ G V +
Sbjct: 1699 AQVEACVSVHILNGQMKSLEEHQFIKVFRDNEMPLCLILAQMEVIGFPVKEHRLGNLISQ 1758
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+ ++ LE K + L G +F++ ++ +A VL H K P G ST + L+
Sbjct: 1759 IAGSMKKLEAKIFELNGSRFNINSSQAVAKVLGIHRK---PTGR------VSTSREVLE- 1808
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
R E PI +I ++R L LL + ++ L + ++ + +HGH + T+TATGR+SM
Sbjct: 1809 -RLEAPIANLICQYRKLNALL---VKNVQPLMKCCLNNR---IHGHSI-TNTATGRISMA 1860
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ V F + +D ++ R F+P LL+AD+ Q+E+R++
Sbjct: 1861 EPNLQNVAK--NFVVDVQD--------RGAIVSCRSAFMPMDSTRCLLSADFCQLEMRIL 1910
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S+D AL+ ++ P D+FT I+A W +E V Q R+ TK++ YGI+YGM L
Sbjct: 1911 AHLSQDKALVAAMNSPR-DIFTSISAHWHRMNESEVSDQLREGTKKICYGIIYGMSMRKL 1969
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
+++LN + EA+ + F S++PG+ S+ + + KGYVE++ GR+R+L I+ +
Sbjct: 1970 ADELNVTEQEAEVLSEQFHSNYPGIRSYTNRLIKYARHKGYVETITGRRRYLENIRSEDA 2029
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQML---KGRCR 2124
+ KA+RQAVNS QGSAADI K+A+I K + + Q L +
Sbjct: 2030 GTRKKAERQAVNSTIQGSAADIAKVAII-----------KSVKYMRRHCQKLFIDENSVN 2078
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
L+L +HDEL+ EV K+ L++ ME++A L VPL VK+++GS WG+LE
Sbjct: 2079 LVLHIHDELMFEVPADKAKKIAKLLKVVMEASARLTVPLKVKLKMGSCWGNLE 2131
>gi|158285510|ref|XP_564726.3| AGAP007533-PA [Anopheles gambiae str. PEST]
gi|157020027|gb|EAL41770.3| AGAP007533-PA [Anopheles gambiae str. PEST]
Length = 1997
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 342/951 (35%), Positives = 507/951 (53%), Gaps = 142/951 (14%)
Query: 486 KSDEAGTPSSSGM----LKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL- 539
K + A P + M KD L++W LPS + S Y K+GI +L+PWQVECL VL
Sbjct: 366 KPETAKRPPPTSMSLDETKDLRLLANWGLPSTVTSEYAKKGIVQLFPWQVECLSRKEVLL 425
Query: 540 QRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGR 599
+ +NL+Y A TSAGK+ V+E L+ + + A+L+LP+V++ EK +L+ LLEP G
Sbjct: 426 EGKNLIYSAPTSAGKTLVSEFLLAKTVTERKLKAMLILPFVAVAREKMLYLKDLLEPGGM 485
Query: 600 HVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNR 659
V +YG + +AVCTIEKANS+VNR+LE+ L+ +G++V+DE H+++D R
Sbjct: 486 RVEGFYGGYHPPGGFESVDLAVCTIEKANSIVNRLLEQSALTTLGLVVVDEAHLISDPGR 545
Query: 660 GYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWL 719
GY+LELLLTK+R+ A A H +QIV MSAT+PN+ +A WL
Sbjct: 546 GYILELLLTKIRFVA-------------------ARCEHRIQIVCMSATLPNIDLLARWL 586
Query: 720 QAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGG----KDPDHIVELCDEV 775
+A LY T+FRP+ L E +KVGN IYS + +R + L G KD DH+ LC E
Sbjct: 587 EADLYHTDFRPIALVEMLKVGNTIYSASGEAIRYL--KGTLHGYTVPKDADHVALLCLET 644
Query: 776 VQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDA--------- 826
+ +G +V++FC S+ CE A ++ L H D + +D
Sbjct: 645 ILDGCAVIVFCPSKDWCEQLAISLASTLHTLRKENHPHDELRRRLREQLDGERQEEVLLQ 704
Query: 827 LRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLP 886
LR CPAGLD VLE+T+ GVA+HHAGLT +ER+++E +R G +R++ ATSTL++GVNLP
Sbjct: 705 LRNCPAGLDSVLEKTVRYGVAFHHAGLTTDERDIIEGSFRDGALRIIVATSTLSSGVNLP 764
Query: 887 ARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCP 946
ARRVI R P+ G + Y+QM GRAGRTG DT GES+LIC P E K L+ P
Sbjct: 765 ARRVIVRTPKFGGKPMSSLTYKQMIGRAGRTGRDTLGESILICTPAEEKIGRELIGAELP 824
Query: 947 PLHSCL-SEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQ-----DVVKSA 1000
P+ SCL SE+ + AILE++A G T +++ +V TL + + ++ +++
Sbjct: 825 PVRSCLDSENYAHLKRAILEIIASGSATTTQELETFVNATLYSCERDYRFEVNDQLLRPK 884
Query: 1001 QDSLRWL-----------------CHRKFLEW-----------NED---------TK--L 1021
S + L C LE+ ED TK +
Sbjct: 885 ASSSKKLPTGEEEDENEETDPIVSCISFLLEYEFIRCLQQDIVEEDGSTTATPKSTKRTV 944
Query: 1022 YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEV---EPDW 1078
S T LG+A +SL P++ ++ +L RAR+ FVL S+LH +YL TP +V + DW
Sbjct: 945 LSATRLGQACLSASLPPKDGFLLFSELQRARQCFVLESELHAIYLVTPYSVAYQWQQIDW 1004
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+ + + +L + + VG VGV E +++R GA L+YR
Sbjct: 1005 MDFLDLWEKLPSASKRVGELVGVKESFMVRAMRGA----------------ANLDYR--- 1045
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
TL++ KRFY AL L LV E P+ V FK RG++Q+LQ+ + FA +
Sbjct: 1046 ----------TLQIHKRFYTALALLDLVNEVPLCTVARRFKCCRGLLQSLQQVSSTFAGI 1095
Query: 1199 VSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAI 1258
V+ FC L W L+ L+A+F+ R+ FGV E+++L IP + G RAR L+ +G+ + +
Sbjct: 1096 VTSFCASLNWTLLQLLVAQFRERLFFGVAHELLDLMRIPSLNGQRARLLHDSGITGLVQL 1155
Query: 1259 AEASISEIVKALFESSSWIAE----------AQRRVQLGVAKKIKN----GARKIVLEKA 1304
A + + L +S+ AE A+RR K+++N G + +E+A
Sbjct: 1156 ANSDRLAVETILHHRTSFEAERVRENENEYDAERR------KRLRNLYLTGRAGVTVEEA 1209
Query: 1305 EEARIAAFSAFKSL--GLNVPQFSRPILSTATENST---GEEEAATTAPRN 1350
I + L GL P +S+ + E+S+ GE+ A + R+
Sbjct: 1210 ARLLIHEARTYLQLEHGLANPSWSQATETKPNESSSEAKGEQTAQDESKRS 1260
Score = 178 bits (451), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 233/455 (51%), Gaps = 43/455 (9%)
Query: 1739 EIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG-MKFSLYTAADIAN 1797
E+P+ LA E+ G VD E L+ + ++A L G + ++ +A
Sbjct: 1566 EMPVQLALASAEVIGFPVDRERLAALIAQLKACRDRIAEEARKLNGNQRLDFGSSRAVAK 1625
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
L +L G N KQ T + L+ R E P+ ++ +R + L T+ +
Sbjct: 1626 AL----RLA---GGNDRKQC-RTVRQVLE--RLESPLAALVIAYRKIESNLTRTIEPLYR 1675
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV--EHMVEFKMSNEDIYGGNAEVD 1915
+ R + +HG T+TGR++M EPNLQ V + V +++ GG+A
Sbjct: 1676 IVRPGSNR----VHGRSF-CFTSTGRITMHEPNLQTVVKDFTVPARLTEGGGGGGDAPPP 1730
Query: 1916 HCKINARDFFIPSQEN--WILLAADYSQIELRLMAHFSKDPALIGLL----------SKP 1963
+ R F S + +LL+AD+ Q+EL ++ H S+DP L+ L ++
Sbjct: 1731 --LFSCRSTFACSDPDGGTVLLSADFCQLELSILTHLSQDPQLMAALGGGGNEAPGRTEA 1788
Query: 1964 HGDVFTMIAARWTGRSEDS-VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKI 2022
DVF +AARW +S V + R++TK ++YG++YGMG ++ +L + A+ +
Sbjct: 1789 RSDVFRALAARWNHYERESDVSDELRNRTKAIVYGVIYGMGVRAMAAELQLDEDAARTLM 1848
Query: 2023 KSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSIC 2082
+ F +++P + ++ V Q GY+E+L GR+R L I N +E+S+A+RQAV +
Sbjct: 1849 EQFHATYPEIRRYIERVVRLTRQLGYIETLTGRRRHLPAITSENARERSEAERQAVCTTI 1908
Query: 2083 QGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVI 2142
QGSAADI+K A++ + + Y+ N L+ R R +L +HDEL+ EV S +
Sbjct: 1909 QGSAADILKNAIVRMRRNLRK--YR-------NVLELE-RIRFVLHMHDELIYEVPRSQL 1958
Query: 2143 KEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+ +++ ME+ A L VPL VK++ G +WG+++
Sbjct: 1959 HKIAKILKSSMENCAKLSVPLRVKLKAGPSWGTMQ 1993
>gi|344282241|ref|XP_003412882.1| PREDICTED: DNA polymerase theta [Loxodonta africana]
Length = 2567
Score = 535 bits (1377), Expect = e-148, Method: Compositional matrix adjust.
Identities = 307/815 (37%), Positives = 462/815 (56%), Gaps = 100/815 (12%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 69 DKLLLANWGLPKAVLEKYYSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 128
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ T K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 129 LLILKRVLETQKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPTGHFSSLDI 188
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++ E ++ +G +V+DELHM+ D +RGYLLELLLTK+ Y +
Sbjct: 189 AVCTIERANGLINRLIGENKMDLVGTVVVDELHMLGDPHRGYLLELLLTKVCYITQK--- 245
Query: 680 DSSSGENSGTSSGKADPA----HGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
++S +AD A + +QI+GMSAT+PN+ VA WL A LY T+FRPVPL E
Sbjct: 246 ---------SASCQADLASPQPNAVQIIGMSATLPNLELVASWLNAELYHTDFRPVPLLE 296
Query: 736 YIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVV-----QEGHSVLIFCSSRK 790
IK+G++IY M +VR + D D+ + +E V++ +K
Sbjct: 297 SIKIGSSIYDSSMKLVREFQPMLQVKAVKIDKFQRSADKTIGMVKPRECPPVIL---DQK 353
Query: 791 GCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHH 850
G + +D L+R P+GLD VL++T+P GVA+HH
Sbjct: 354 G----------------------------LLEVMDHLKRLPSGLDSVLQKTVPWGVAFHH 385
Query: 851 AGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQM 910
AGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P +D Y+QM
Sbjct: 386 AGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPVFSGRSLDVLTYQQM 445
Query: 911 AGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL-----SEDKNGMTHAILE 965
GRAGRTG+DT GES+L+CK E K + LL S P+ SCL E M AILE
Sbjct: 446 VGRAGRTGVDTVGESILVCKDSEKSKGIALLQGSLKPVRSCLRRQEGEEVTASMIRAILE 505
Query: 966 VVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDS---------LRWLCHRKFLEW 1015
++ GG+ T++D+ Y CT L S K + ++ QDS +RWL +F++
Sbjct: 506 IIVGGVASTSQDMQTYASCTFLAASMKEGKQGIQRNQDSVQLGAVEACVRWLLENEFIQV 565
Query: 1016 NE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI 1070
+E + K+Y T LG A SSL P ++L + DL RA + FVL +DLH++YL TP+
Sbjct: 566 SEAGDGTEGKVYHPTHLGSATLSSSLSPVDTLDIFADLQRAMKSFVLENDLHILYLVTPV 625
Query: 1071 NVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLH 1129
+ DW ++ + +L + V VGV E +L R G K+ T+ H
Sbjct: 626 FEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVARTERQH 678
Query: 1130 GKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQ 1189
+ + + KRF+ +L+L L+ E P+ E+ + + RG +Q+LQ
Sbjct: 679 ------------------RQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCNRGQIQSLQ 720
Query: 1190 ENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYK 1249
++A +A M++VF RLGW+++E L+++FQ R++FGV+ E+ +L + + RAR LY
Sbjct: 721 QSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGVQRELCDLIRVSLLNAQRARFLYA 780
Query: 1250 AGLRTPLAIAEASISEIVKALFESSSWIAEAQRRV 1284
+G T +A A+ +E V+A+ +++ A++ V
Sbjct: 781 SGFLTVADLARANTAE-VEAVLKNAVPFKSARKAV 814
Score = 244 bits (622), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 212/731 (29%), Positives = 332/731 (45%), Gaps = 128/731 (17%)
Query: 1533 GLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEI 1592
GLAVCW S YY +L K+ +H L S D + +K R +
Sbjct: 1879 GLAVCWGGSDAYYFSLQKE--QNHSEISASLAPPSLDPGL--------TVKDRMWHLQTC 1928
Query: 1593 MEKRD-------VRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLS 1645
+EK V F + K+ +L+ +S+++ G E+ + LL
Sbjct: 1929 LEKNSDKERCAIVYDFIQSYKI---LLQSCGISLEQ-----------GYEDPKVACWLLD 1974
Query: 1646 PVHLKDGIDMCIVSWILWPDDERSSNPNLE-KEVKKRLSSEAA-AAANRSGRWKNQMRRA 1703
P + + + S ++P P LE E + S +A SGR++
Sbjct: 1975 PDSKEPTLHSIVTS--VFPH----GLPLLEGMETGHGIQSLGLNVSAEHSGRYR------ 2022
Query: 1704 AHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQ 1763
V A+ + L LL E L + +E+P LA +EL GIG C
Sbjct: 2023 ---ASVESVLVFNAM-NQLNSLLQKENLQDVFRKVEMPTQYCLALLELNGIGFSTAECES 2078
Query: 1764 ARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLP----------------I 1807
++++Q KL +E +AY LAG FS ++ DIA VL+ LKLP
Sbjct: 2079 QKHIMQAKLDAIETQAYQLAGHSFSFTSSDDIAEVLFLELKLPPNGEMKNQGSKKTLGST 2138
Query: 1808 PEGHNKGK-----QHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
GH+KG+ + ST K L+ L+ HP+ +I E R ++ + + + R++
Sbjct: 2139 RRGHDKGRNLRLGKQLSTRKDVLNKLKALHPLPGLILEWRRISNAITKVVFPLQREKRLN 2198
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMS------------------- 1903
++ Q+ TATGR++ +PN+Q V E KM
Sbjct: 2199 PFLGMERIYP-VSQSHTATGRITFTDPNIQNVPKDFEIKMPMLVEESPPSQALGKGLLPT 2257
Query: 1904 --NEDIYGGNAEVDH--------------CKINARDFFIPSQENWILLAADYSQIELRLM 1947
+ G N H ++ R F+P ++LAADY Q+ELR++
Sbjct: 2258 GRGGNKRGHNLSPGHQARMEEGASVRGMPFSVSMRHAFVPF-PGGVILAADYCQLELRIL 2316
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S+D LI +L+ DVF +AA W +SVG R Q K++ YGI+YGMG +L
Sbjct: 2317 AHLSQDHRLIHVLNT-GVDVFRSVAAEWKMTEPESVGEDLRQQAKQICYGIIYGMGAKSL 2375
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
EQ+ N+A I SFKS + G+ ++ V +C + G+V+++ GR+R+L IK N
Sbjct: 2376 GEQMGIKENDAACYIDSFKSRYTGINHFMKETVKNCRRDGFVQTVLGRRRYLPGIKDNNP 2435
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVG------------GVYK-------P 2108
K+ A+RQA+N+ QGSAADI+K A +NI + G+ + P
Sbjct: 2436 YHKAHAERQAINTTVQGSAADIVKTATVNIQKQLETFHLTFKSHGHREGMLRSDRRGLLP 2495
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
L F ++G +LQ+HDEL+ EV + + +V+ ME+A L V L VK++
Sbjct: 2496 RGRLPGMFCPVRGGF-FILQLHDELLYEVAEEDVVQVAQIVKSEMENAIKLSVKLKVKVK 2554
Query: 2169 VGSTWGSLEPF 2179
+G++WG+L+ F
Sbjct: 2555 IGASWGALKDF 2565
>gi|194901634|ref|XP_001980357.1| GG17101 [Drosophila erecta]
gi|190652060|gb|EDV49315.1| GG17101 [Drosophila erecta]
Length = 2037
Score = 534 bits (1376), Expect = e-148, Method: Compositional matrix adjust.
Identities = 310/811 (38%), Positives = 452/811 (55%), Gaps = 88/811 (10%)
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILM 562
+S+W LP I YKK+G+ +++ WQVECL VL + NLVY A TSAGK+ V+EIL+
Sbjct: 208 ISAWNLPLSIQEEYKKKGVVQMFDWQVECLCKPRVLFEHCNLVYSAPTSAGKTLVSEILL 267
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVC 622
L+ ++ GK ALL+LP++S+ EK +L+ LL P G V +YG + VA+C
Sbjct: 268 LKTVLERGKKALLILPFISVVREKMFYLQDLLTPAGYRVEGFYGGYTPPGGFESLHVAIC 327
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKANS+VN+++E+G+L IG +V+DE+H+++D+ RGY+LELLL K+ Y +
Sbjct: 328 TIEKANSIVNKLMEQGKLETIGTVVVDEVHLISDKGRGYILELLLAKILYMSRRS----- 382
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
A +Q++ MSAT+ NV + WL A LY TN+RPV L+E IKVG
Sbjct: 383 --------------ALQIQVITMSATLENVELLKSWLDAELYITNYRPVALKEMIKVGEK 428
Query: 743 IYSKKMDVVRTILTAANLG---GKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
IY + ++R + + D D + LC E + EG SV++FC S+ CE+ A +
Sbjct: 429 IYDNHLRIIRDVSEQKEIKQALANDSDDVALLCIETLLEGCSVIVFCPSKDWCENLAVQL 488
Query: 800 SKFLKKFSINVHSSDSEF----------IDITSAIDALRRCPAGLDPVLEETLPSGVAYH 849
+ + + S SE I LR P GLD V+ + + A+H
Sbjct: 489 ATAMH----GIIKSGSELGLRLRTNLNPRAIEEVKQQLRDIPTGLDGVMSKAVTYACAFH 544
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
HAGLT EER++VE ++ G ++VL ATSTL++GVNLPARRV+ R P + YRQ
Sbjct: 545 HAGLTTEERDIVEASFKAGALKVLVATSTLSSGVNLPARRVLIRSPLFCGKQMSSLTYRQ 604
Query: 910 MAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTH---AILEV 966
M GRAGRTG DT GES++IC + L+ P+ SCL D G TH A+LEV
Sbjct: 605 MIGRAGRTGKDTLGESIVICTESTARMGRDLVTAQLQPITSCLEMD--GSTHLKRALLEV 662
Query: 967 VAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKS---------AQDSLRWLCHRKFLEWN- 1016
++ G+ T +DI +V CTLL++ K FQ K D+L +L +F+
Sbjct: 663 ISSGVASTKQDIDCFVNCTLLSAQKAFQAKDKPLDEDSDSHYINDALDFLVEYEFVRLQR 722
Query: 1017 ---EDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE 1073
E+T Y T LG A SS+ P + LI+ +L ++R FVL S+LH VYL TP +V
Sbjct: 723 DEEEETTSYVATRLGAACLASSMPPTDGLILFAELQKSRRCFVLESELHAVYLVTPYSVC 782
Query: 1074 VE---PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHG 1130
+ DW +Y + + +LS + VG VGV E +L++ G
Sbjct: 783 YQLQDLDWLIYLDMWEKLSPAMKKVGELVGVKEAFLVKAMRG----------------QT 826
Query: 1131 KLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQE 1190
KL+Y+ ++V KRFY AL L LV ETP+ V FK RGM+Q+LQ+
Sbjct: 827 KLDYK-------------QMQVHKRFYTALALQELVNETPINVVVHKFKCHRGMLQSLQQ 873
Query: 1191 NAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKA 1250
A FA +V+ FC L W L ++++F++R+ FG+ ++++L +P + RARAL+ A
Sbjct: 874 MASTFAGIVTAFCNSLQWSTLALIVSQFKDRLFFGIHRDLIDLMRLPDLSQKRARALFDA 933
Query: 1251 GLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
GL + + +A A + E+ K LF S S+ + Q
Sbjct: 934 GLTSLVELAGADVLELEKVLFNSLSFDSAKQ 964
Score = 208 bits (530), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 233/456 (51%), Gaps = 43/456 (9%)
Query: 1728 SEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKF 1787
S +L++ ++E+PL L ME G + Q + +R LE K + G +F
Sbjct: 1621 SGQLLKFFHDLEMPLQLTLCHMEFVGFPAQQQLLQQLYQKMVAVVRKLETKIFEQHGSRF 1680
Query: 1788 SLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKL 1847
+L ++ +A VL H K+ G+ +T + L+ L PI +I +R LA L
Sbjct: 1681 NLGSSQAVAKVLGLHRKI-------NGR--VTTSRQVLEKL--NTPISHMILGYRKLAGL 1729
Query: 1848 LNCTLGSI---CSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN 1904
L ++ + C RI HG + T TATGR+SM EPNLQ V ++ +
Sbjct: 1730 LAKSIQPLLKCCQADRI---------HGQSI-TYTATGRISMAEPNLQNVAKEFCIQVGS 1779
Query: 1905 EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
D I+ R F+ E+ LL+AD+ Q+E+R++AH S+D L+ +++
Sbjct: 1780 ----------DAVNISCRLPFMLKDEDRCLLSADFCQLEMRILAHLSQDKGLLKVMNSSQ 1829
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
D+F IAA W E V R+ TK++ YGI+YGMG +L+E LNCS EA+ +
Sbjct: 1830 -DLFIAIAAHWNKIEESEVSQNLRNSTKQVCYGIVYGMGMRSLAESLNCSEEEARLISEQ 1888
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
F ++ G+ + V +G+VE++ GR+R+L I K++A+RQA+NS QG
Sbjct: 1889 FHQAYTGIREYTMRVVKFARNQGFVETITGRRRYLDNINSDQEHLKNQAERQAINSTIQG 1948
Query: 2085 SAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKE 2144
SAADI K A++ + + Y+ L L++ +HDEL+ EV + K+
Sbjct: 1949 SAADIAKSAILKMEKNL--ERYRDKLGLG------DKSVDLVMHLHDELIFEVPAAKSKK 2000
Query: 2145 AVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
++ M++ L VPL VK+++G +WG L+ F+
Sbjct: 2001 IAKVLSVTMQNCVKLTVPLQVKLRIGRSWGELQDFK 2036
>gi|332225568|ref|XP_003261953.1| PREDICTED: DNA polymerase theta, partial [Nomascus leucogenys]
Length = 2473
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 299/755 (39%), Positives = 437/755 (57%), Gaps = 82/755 (10%)
Query: 550 TSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQG 609
TSAGK+ VAE+L+L+R++ K A+ +LP+VS+ EK +L+ L + +G V Y G+
Sbjct: 2 TSAGKTLVAELLILKRVLEMRKKAVFILPFVSVAKEKKYYLQSLFQEVGIRVDGYMGSTS 61
Query: 610 GGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTK 669
+AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK
Sbjct: 62 PSRHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTK 121
Query: 670 LRYAAGEGTSDSSSGENSGTSSGKADPAHGL----QIVGMSATMPNVAAVADWLQAALYE 725
+AD A L QIVGMSAT+PN+ VA WL A LY
Sbjct: 122 XXXXX--------------XXXXQADLASSLSNAVQIVGMSATLPNLEIVASWLNAELYH 167
Query: 726 TNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIF 785
TNFRPVPL E +KVGN+IY M +VR + G D DH+V LC E +++ HSVL+F
Sbjct: 168 TNFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKG-DEDHVVSLCYETIRDNHSVLLF 226
Query: 786 CSSRKGCESTARHVSKFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPA 832
C S+K CE A +++ N+H + ++ +D LRR P+
Sbjct: 227 CPSKKWCEKLADTIAREF----YNLHHQAEGLVKPSECPPVILEQKELLEVMDQLRRLPS 282
Query: 833 GLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIF 892
GLD VL++T+P GVA+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI
Sbjct: 283 GLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVII 342
Query: 893 RQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL 952
R P G +D Y+QM GRAGR G+DT GES+LICK E K + LL S P+ SCL
Sbjct: 343 RTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCL 402
Query: 953 S-----EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR- 1005
E M AILE++ G+ T++D+H Y CT L S K + ++ Q+S++
Sbjct: 403 QRREGEEVTASMIRAILEIIVSGVASTSQDMHTYAACTFLAASMKEGKQGIQRNQESVQL 462
Query: 1006 --------WLCHRKFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAR 1052
WL +F++ E + K+Y T LG A SSL P ++L + DL RA
Sbjct: 463 GAIEACVMWLLENEFIQSTEASDGPEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAM 522
Query: 1053 EGFVLASDLHLVYLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAH 1111
+GFVL +DLH++YL TP+ + DW ++ + +L + V VGV E +L R
Sbjct: 523 KGFVLENDLHILYLVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVK 582
Query: 1112 GAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPV 1171
G K+ T+ H + + + KRF+ +L+L L+ E P+
Sbjct: 583 G-------KVVARTERQH------------------RQMAIHKRFFTSLVLLDLISEVPL 617
Query: 1172 LEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIV 1231
E+ + + RG +Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+
Sbjct: 618 REINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELC 677
Query: 1232 ELTTIPYVKGSRARALYKAGLRTPLAIAEASISEI 1266
+L + + RAR LY +G T +A A+I E+
Sbjct: 678 DLVRVSLLNAQRARVLYASGFHTVADLARANIVEV 712
Score = 244 bits (624), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 266/533 (49%), Gaps = 79/533 (14%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 1943 LNSLLQKENLQDVFRKVEMPSQYCLALLELNGIGFSAAECESQKHIMQAKLDAIETQAYQ 2002
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHP 1818
LAG FSL ++ DIA VL+ LKLP P G K G+Q
Sbjct: 2003 LAGHSFSLTSSDDIAEVLFLELKLP-PNGEMKNQGSKKTLGSTRRGNDNGRKLRLGRQF- 2060
Query: 1819 STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTS 1878
ST K L+ L+ HP+ +I E R + + + + R++ ++ Q+
Sbjct: 2061 STSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-VSQSH 2119
Query: 1879 TATGRLSMEEPNLQCVEHMVEFKMS--------NEDI------YGGNAEVDHCKINAR-- 1922
TATGR++ EPN+Q V E KM ++ + G C +N R
Sbjct: 2120 TATGRITFIEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGKYTKGCSLNPRCQ 2179
Query: 1923 ------------DFFIPSQENWI------LLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
F I + ++ +LAADYSQ+ELR++AH S D LI L+
Sbjct: 2180 AQMEERAADRGMPFSISMRHAFVPFPGGLILAADYSQLELRILAHLSHDRRLIQALNT-G 2238
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A I S
Sbjct: 2239 ADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDS 2298
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
FKS + G+ ++ V +C + G+V+++ GR+R+L I+ N K+ A+RQA+N+ QG
Sbjct: 2299 FKSRYTGINQFMRETVKNCKRDGFVQTILGRRRYLPGIEDNNPYHKAHAERQAINTTVQG 2358
Query: 2085 SAADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQMLKGR-CRL-----L 2126
SAADI+KIA +NI HS G+ + D + + + L+G C + +
Sbjct: 2359 SAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDRTGLSRKRKLQGMFCPIRGGFFI 2418
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
LQ+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L+ F
Sbjct: 2419 LQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDF 2471
>gi|340722505|ref|XP_003399645.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Bombus
terrestris]
Length = 2005
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 307/795 (38%), Positives = 466/795 (58%), Gaps = 72/795 (9%)
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQR-RNLVYCASTSAGKSFVAEILM 562
L+SW LP I Y+ RG+ ++ WQ ECL +++ RNLVY A TSAGK+ VAEILM
Sbjct: 226 LASWGLPPNILQKYEARGVITMFDWQTECLSNHKIIEENRNLVYSAPTSAGKTLVAEILM 285
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKD----TS 618
++ ++ K + +LP+VS+ EK + + LL G V + G G +P T
Sbjct: 286 IKTVLERRKKVIFILPFVSVVREKMYYFQDLLSDSGVRVEGFMG----GVMPAGGFAATH 341
Query: 619 VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGT 678
+A+ TIEKANSLVN ++EE L +G ++IDELH+V D NRGYLLELLLTKL+Y
Sbjct: 342 IAIATIEKANSLVNHLMEENELINLGSVIIDELHLVGDPNRGYLLELLLTKLKYM----- 396
Query: 679 SDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+ EN +Q++GMSAT+PN++ +A WL A LY+T FRP+PL E K
Sbjct: 397 --TFRNENVN-----------IQLIGMSATLPNLSILAKWLDAELYKTEFRPIPLNEQCK 443
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+G +IY K+ ++R + L D D I+ LC E + +GHSVLIFCS++ CE A
Sbjct: 444 IGRSIYDNKLCLIRNLTPMPELT-MDSDDILHLCIETISDGHSVLIFCSTKNWCEKLAEQ 502
Query: 799 VSKFLKKF---SINVHSSDSEFID---ITSAIDALRRCPAGLDPVLEETLPSGVAYHHAG 852
++ K + + + + +D I+ ++ L+R P GLD +L+ T+ G A+HHAG
Sbjct: 503 IAAAFCKLGRENTKLGKTLRQQLDTALISETLEQLKRSPTGLDNILKNTVSFGTAFHHAG 562
Query: 853 LTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAG 912
LT++ER+++E +R G +RVL ATSTL++GVNLPARRVI R P+ +D YRQM G
Sbjct: 563 LTMDERDIIEGSFRSGSLRVLVATSTLSSGVNLPARRVIIRSPKFAGKLLDSLTYRQMIG 622
Query: 913 RAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIV 972
RAGR G DT GES+L+C P E K LL+ S P+ SCL ED + A+LE +A IV
Sbjct: 623 RAGRMGKDTAGESILMCNPTEQKAAEILLSASLEPIESCL-EDSTPLIRALLEAIASEIV 681
Query: 973 QTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFL--EWNEDTKLYSTTPLGRA 1030
T + Y++CTL++ + + + + D++++L +FL + ED + T G+A
Sbjct: 682 HTPLHLELYIKCTLVSLSDEY-NSKGTWNDAIKFLVDNEFLLLQKTEDGHRWVATAFGKA 740
Query: 1031 AFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEP---DWELYYERFLE 1087
+S+ P + L +L++L +AR FVL ++LH++YL TP+N + DW + E +
Sbjct: 741 CLAASISPRDGLFLLEELQKARRCFVLDTELHVIYLVTPLNSGNQIGSIDWMTFLELWRM 800
Query: 1088 LSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDA 1147
LS ++ VG VGV E +L G ++
Sbjct: 801 LSESERRVGQLVGVEERFLTLAVQG------------------------------IIRPG 830
Query: 1148 QTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG 1207
++L + KRFY AL L LV+E P+ VC + RG++Q LQ++A FA M++ FC++LG
Sbjct: 831 KSLSIHKRFYTALALHDLVREVPLTVVCTKYGCCRGVLQTLQQSASTFAGMITQFCKQLG 890
Query: 1208 WYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIV 1267
W LE L+++FQ R+ FGV E+++L +P + G RAR+LYK G+ + +A A+ ++
Sbjct: 891 WGCLELLVSQFQTRLQFGVCRELLDLLRLPMLNGLRARSLYKHGITSVAELAIANELDVE 950
Query: 1268 KALFESSSWIAEAQR 1282
+AL+++ + +E ++
Sbjct: 951 RALYKALPFESEKEQ 965
Score = 253 bits (646), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 258/462 (55%), Gaps = 43/462 (9%)
Query: 1728 SEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKF 1787
S L+ +IE+ V +LA MEL G+GV ++ +++ +++ LE++AY L G +F
Sbjct: 1574 SPTLLYTFKDIEMRTVTLLACMELTGLGVSLKSLQDLSSIIHEEMMSLEEQAYALCGRRF 1633
Query: 1788 SLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKL 1847
+ ++ + +L G KGK+ S +K L+ + +HP+ ++ R L+
Sbjct: 1634 NFSSSKQVGEIL----------GLYKGKKX-SVNKAVLE--QSDHPVSNLVMSWRKLSAT 1680
Query: 1848 LNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDI 1907
+ + I +LA+ S +HG+ + TST TGR+SM EPNLQ V FK ++
Sbjct: 1681 QSKIIYPILNLAQHSSR-----IHGNCI-TSTLTGRVSMHEPNLQNVPKDFNFKDNS--- 1731
Query: 1908 YGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDV 1967
I+ R FIP+ N ++L+ADY Q+ELR++AHFS+D L ++ KP GD+
Sbjct: 1732 ---------FTISVRMAFIPAIGN-VMLSADYCQLELRILAHFSRDILLCDIMRKP-GDI 1780
Query: 1968 FTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKS 2027
F IAA W SED V + R TK+L YG++YGMG TL+E L+ +AKE ++SF +
Sbjct: 1781 FKNIAANWNHISEDQVDDKIRQHTKQLCYGMIYGMGVKTLAENLSVDEVKAKEFLESFMN 1840
Query: 2028 SFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAA 2087
++PG++ WL + GY+ ++ R+R ++ N EK +A+RQAVN+ QGSAA
Sbjct: 1841 AYPGISKWLTNVLDEARTNGYITTILERRRMFPELTSTNPVEKLQAERQAVNTKVQGSAA 1900
Query: 2088 DIIKIAMINIHSII-----VGGVYKPDSS----LAANFQMLKGR-CRLLLQVHDELVLEV 2137
DI K AM+NI I + P S+ L +N + + R L+LQ+HDEL+ EV
Sbjct: 1901 DIAKKAMVNIEERIRVEFPMATTIMPSSNPIRKLRSNSREAQQRGGYLVLQLHDELLYEV 1960
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+ + + +V++ ME L +PL VK++VG WG L +
Sbjct: 1961 NIHDLNQVAKIVKESMEQVCQLAIPLPVKLKVGPAWGDLSEY 2002
>gi|350418478|ref|XP_003491870.1| PREDICTED: DNA polymerase theta-like [Bombus impatiens]
Length = 2240
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 309/799 (38%), Positives = 461/799 (57%), Gaps = 80/799 (10%)
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQR-RNLVYCASTSAGKSFVAEILM 562
L+SW LP I Y+ RG+ ++ WQ ECL +++ RNLVY A TSAGK+ VAEILM
Sbjct: 226 LASWGLPPNILQKYEARGVVTMFDWQTECLSNHKIIEENRNLVYSAPTSAGKTLVAEILM 285
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKD----TS 618
++ ++ K + +LP+VS+ EK + + LL G V + G G +P T
Sbjct: 286 IKTVLERRKKVIFILPFVSVVREKMYYFQDLLSDSGVRVEGFMG----GVMPAGGFAATH 341
Query: 619 VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGT 678
+A+ TIEKANSLVN ++EE L +G ++IDELH+V D NRGYLLELLLTKL+Y
Sbjct: 342 IAIATIEKANSLVNHLMEENELINLGSVIIDELHLVGDPNRGYLLELLLTKLKYM----- 396
Query: 679 SDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+ EN +Q++GMSAT+PN++ +A WL A LY+T FRP+PL E K
Sbjct: 397 --TFRNENVN-----------IQLIGMSATLPNLSILAKWLDAELYKTEFRPIPLNEQCK 443
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+G +IY K+ ++R + L D D I+ LC E + +GHSVLIFCS++ CE A
Sbjct: 444 IGRSIYDNKLCLIRNLTPMPELT-MDSDDILHLCIETISDGHSVLIFCSTKNWCEKLAEQ 502
Query: 799 VSKFLKKF---SINVHSSDSEFID---ITSAIDALRRCPAGLDPVLEETLPSGVAYHHAG 852
++ K + + + + +D I+ ++ L+R P GLD +L+ T+ G A+HHAG
Sbjct: 503 IAAAFCKLGRENTKLGKTLRQQLDTALISETLEQLKRSPTGLDNILKNTVSFGTAFHHAG 562
Query: 853 LTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAG 912
LT++ER+++E +R G +RVL ATSTL++GVNLPARRVI R P+ +D YRQM G
Sbjct: 563 LTMDERDIIEGSFRSGSLRVLVATSTLSSGVNLPARRVIIRSPKFAGKLLDSLTYRQMIG 622
Query: 913 RAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIV 972
RAGR G DT GES+L+C P E K LL+ S P+ SCL ED + A+LE +A IV
Sbjct: 623 RAGRMGKDTAGESILMCNPTEQKAAEILLSTSLEPIESCL-EDSTPLIRALLEAIASEIV 681
Query: 973 QTAEDIHRYVRCTLL------NSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTP 1026
T + Y++ TL+ NS P+ D +K D+ L L+ ED + T
Sbjct: 682 HTPLHLELYIKSTLVSLSDEYNSKSPWNDAIKFLVDNEFLL-----LQKTEDGHRWVATA 736
Query: 1027 LGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEP---DWELYYE 1083
G+A +S+ P + L +L++L +AR FVL ++LH++YL TP+N + DW + E
Sbjct: 737 FGKACLAASISPRDGLFLLEELQKARRCFVLDTELHVIYLVTPLNSGNQIGSIDWMTFLE 796
Query: 1084 RFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNM 1143
+ LS ++ VG VG+ E +L G +
Sbjct: 797 LWKILSESERRVGQLVGIEERFLTSAVQG------------------------------I 826
Query: 1144 LSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFC 1203
+ + L + KRFY AL L LV+E P+ VC + RG++Q LQ++A FA M++ FC
Sbjct: 827 VRPGKLLSIHKRFYTALALHDLVREVPLTVVCTKYGCCRGVLQTLQQSASTFAGMITQFC 886
Query: 1204 ERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASI 1263
++LGW LE L+++FQ R+ FGV E+++L +P + G RAR+LYK G+ + +A A+
Sbjct: 887 KQLGWGCLELLVSQFQTRLQFGVCRELLDLLRLPMLNGLRARSLYKHGITSVAELATANE 946
Query: 1264 SEIVKALFESSSWIAEAQR 1282
++ +AL+++ + +E ++
Sbjct: 947 LDVERALYKALPFESEKEQ 965
Score = 253 bits (646), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 257/462 (55%), Gaps = 43/462 (9%)
Query: 1728 SEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKF 1787
S L+ +IE+ V +LA MEL G+GV ++ +++ +++ LE++AY L G KF
Sbjct: 1809 SPTLLYTFKDIEMRTVTLLACMELTGLGVSLKSLQDLSSIIHEEMMSLEEQAYALCGRKF 1868
Query: 1788 SLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKL 1847
+ ++ + +L G KGK+ S +K L+ + +HP+ ++ R L+
Sbjct: 1869 NFSSSKQVGEIL----------GLYKGKK-ISVNKAVLE--QSDHPVSSLVMSWRKLSAT 1915
Query: 1848 LNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDI 1907
+ + I +LA+ S +HG+ + TST TGR+SM EPNLQ V FK
Sbjct: 1916 QSKIIYPILNLAQHSSR-----IHGNCI-TSTLTGRVSMHEPNLQNVPKDFNFKD----- 1964
Query: 1908 YGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDV 1967
+ I+ R FIP+ N ++L+ADY Q+ELR++AHFS+D L ++ KP GD+
Sbjct: 1965 -------NSFTISVRMAFIPAIGN-VMLSADYCQLELRILAHFSRDILLCDIMRKP-GDI 2015
Query: 1968 FTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKS 2027
F IAA W SED V + R TK+L YG++YGMG TL+E L+ +AKE ++SF +
Sbjct: 2016 FKNIAANWNHISEDQVDDKIRQHTKQLCYGMIYGMGVKTLAENLSVDEVKAKEFLESFMN 2075
Query: 2028 SFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAA 2087
++PG++ WL + GY+ ++ R+R ++ + EK +A+RQAVN+ QGSAA
Sbjct: 2076 AYPGISKWLTNVLDEARTNGYITTILERRRMFPELTSTSPVEKLQAERQAVNTKVQGSAA 2135
Query: 2088 DIIKIAMINIHSII-----VGGVYKPDSS----LAANFQMLKGR-CRLLLQVHDELVLEV 2137
DI K AM+NI I + P S+ L +N + + R L+LQ+HDEL+ EV
Sbjct: 2136 DIAKKAMVNIEERIRVEFPMATTIMPSSNPIRKLRSNSREAQQRGGYLVLQLHDELLYEV 2195
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+ + + +V++ ME L VPL VK++VG WG L +
Sbjct: 2196 NIHDLNQVAKIVKESMEQVCQLAVPLPVKLKVGPAWGDLSEY 2237
>gi|195329438|ref|XP_002031418.1| GM25985 [Drosophila sechellia]
gi|194120361|gb|EDW42404.1| GM25985 [Drosophila sechellia]
Length = 2006
Score = 531 bits (1369), Expect = e-147, Method: Compositional matrix adjust.
Identities = 337/913 (36%), Positives = 496/913 (54%), Gaps = 110/913 (12%)
Query: 412 VVSEKGSVTHKSCQKIKFKCHHDNTSRTEGI-SDVQEKDSVLIVHERKLDISSQGIDSIT 470
VV E+ +V S F C + +E + D+ SVL E +I Q +++
Sbjct: 118 VVQEQPNVDENS-----FLCPAQDEEASEQLKEDILLSHSVLAKQEFYQEIL-QVTQNLS 171
Query: 471 SDSPTNVIKKPVGNEKSDEAGTPSSSGM---LKDCLDLSSW-LPSEICSIYKKRGISKLY 526
S SP + P N P M L +S+W LP I YKK+G+ +++
Sbjct: 172 SMSPNQLRVSP--NSSRIREALPERPAMPLDLNSLRSISAWNLPMSIQEEYKKKGVVQMF 229
Query: 527 PWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAE 585
WQVECL +L + NLVY A TSAGK+ V+EI+ML+ ++ GK LL+LP++S+ E
Sbjct: 230 DWQVECLSKPKLLFEHCNLVYSAPTSAGKTLVSEIMMLKTVLERGKKVLLILPFISVVRE 289
Query: 586 KAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGI 645
K +++ LL P G V +YG + VA+CTIEKANS+VN+++E+G+L IG+
Sbjct: 290 KMFYMQDLLTPAGYRVEGFYGGYTPPGGFESLDVAICTIEKANSIVNKLMEQGKLETIGM 349
Query: 646 IVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQI--V 703
+V+DE+H+++D+ RGY+LELLL K+ Y + +GLQI +
Sbjct: 350 VVVDEVHLISDKGRGYILELLLAKILYMSRR---------------------NGLQIQVI 388
Query: 704 GMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAAN-LGG 762
MSAT+ NV + WL A LY TN+RPV L+E IKVG IY ++ ++R + L G
Sbjct: 389 TMSATLANVQLLQSWLDAELYITNYRPVALKEMIKVGTVIYDHRLKLIRDVAKEKEFLKG 448
Query: 763 --KDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFL-----------KKFSIN 809
D D + LC E + EG SV++FC S+ CE+ A ++ + ++ N
Sbjct: 449 LENDSDDVALLCIETLLEGCSVIVFCPSKDWCENLAVQLATAIHGQIKSGTVLGQRLRAN 508
Query: 810 VHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGL 869
+ I LR P GLD V+ + + A+HHAGLT EER++VE ++ G
Sbjct: 509 LDPR-----AIAEVKQQLRDIPTGLDAVMSKAITYACAFHHAGLTTEERDIVEASFKAGA 563
Query: 870 VRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLIC 929
++VL ATSTL++GVNLPARRV+ R P G + YRQM GRAGR G DT GES+LIC
Sbjct: 564 LKVLVATSTLSSGVNLPARRVLIRSPLFGGKPMSSLTYRQMIGRAGRMGKDTLGESILIC 623
Query: 930 KPEEVKKIMG--LLNESCPPLHSCLSEDKNGMTH---AILEVVAGGIVQTAEDIHRYVRC 984
E+ MG L+ P+ SCL D +G TH A+LEV++ G+ T EDI +V C
Sbjct: 624 N--EINARMGRDLVLSDLQPITSCL--DMDGSTHLKRALLEVISSGVANTKEDIDFFVNC 679
Query: 985 TLLNSTKPFQDVVKSA---------QDSLRWLCHRKF--LEWNE--DTKLYSTTPLGRAA 1031
TLL++ K F K D+L +L +F L+ NE +T +Y T LG A
Sbjct: 680 TLLSAEKAFHAKEKPPDEEPDANYINDALDFLVEYEFVRLQRNEEKETAVYVATRLGAAC 739
Query: 1032 FGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE---PDWELYYERFLEL 1088
SS+ P + LI+ +L ++R FVL S+LH VYL TP +V + DW LY + +L
Sbjct: 740 LASSMPPTDGLILFAELQKSRRSFVLESELHAVYLVTPYSVCYQLQDLDWLLYVNMWEKL 799
Query: 1089 SALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQ 1148
++ + VG VGV + +L S LR T KL+Y+
Sbjct: 800 TSPMKKVGEIVGVRDAFL-----------SKALRGQT-----KLDYK------------- 830
Query: 1149 TLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGW 1208
+++ KRFY+AL L LV ETP+ V FK RGM+Q+LQ+ A FA +V+ FC L W
Sbjct: 831 QMQIHKRFYIALALEELVNETPINVVVHKFKCHRGMLQSLQQMAATFAGIVTAFCNSLQW 890
Query: 1209 YDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVK 1268
L ++++F++R+ FG++ ++++L IP + RARAL+ AG+ + + +A A + K
Sbjct: 891 STLALIVSQFKDRLFFGIQRDLIDLMRIPDLSQKRARALFDAGITSLVELAGADALVLEK 950
Query: 1269 ALFESSSWIAEAQ 1281
L+ S S+ + Q
Sbjct: 951 VLYNSLSFDSAKQ 963
Score = 220 bits (561), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 232/448 (51%), Gaps = 38/448 (8%)
Query: 1730 ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSL 1789
+L++ +IE+P+ L MEL G + Q + ++ LE K Y G +F+L
Sbjct: 1593 DLLKFFHDIEMPIQLTLCQMELVGFPAQKQRLQQLYQRMVAVMKKLETKIYEQHGSRFNL 1652
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
++ +A VL H K K +T + L+ L PI +I +R L+
Sbjct: 1653 GSSQAVAKVL---------GLHRKAKGRVTTSRQVLEKLNS--PISHLILGYRKLS---- 1697
Query: 1850 CTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG 1909
C L S+ + Q +HG + T TATGR+SM EPNLQ V EF +
Sbjct: 1698 CLLAK--SIQPLMECCQADRIHGQSI-TYTATGRISMTEPNLQNVAK--EFCI------- 1745
Query: 1910 GNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFT 1969
D I+ R F+P+ E+ LL+AD+ Q+E+R++AH S+D AL+ +++ P D+F
Sbjct: 1746 -QVGADAVNISCRSPFMPTDEDRCLLSADFCQLEMRILAHMSQDKALLEVMNSPQ-DLFI 1803
Query: 1970 MIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSF 2029
IAA W E V R+ TK++ YGI+YGMG +L+E LNCS EA+ F ++
Sbjct: 1804 AIAAHWNKIKESEVTPDLRNSTKQVCYGIVYGMGMRSLAESLNCSEQEARILSDQFHEAY 1863
Query: 2030 PGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADI 2089
G+ + V+ KG+VE++ GR+R+L I + + KA+RQAVNS QGSAADI
Sbjct: 1864 KGIRDYTRRVVNFARGKGFVETITGRRRYLEMIN-SDMEHLKKAERQAVNSTIQGSAADI 1922
Query: 2090 IKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLV 2149
K A++ + I Y+ +L L++ +HDEL+ EV K+ ++
Sbjct: 1923 AKNAILKMEKNI--ERYREKLALG------DKSVDLVMHLHDELIFEVPTGKAKKIAKVL 1974
Query: 2150 QKCMESAALLLVPLLVKIQVGSTWGSLE 2177
MES L VPL VK+++G +WG L+
Sbjct: 1975 SITMESCVKLSVPLKVKLRIGRSWGELK 2002
>gi|195145962|ref|XP_002013959.1| GL23113 [Drosophila persimilis]
gi|194102902|gb|EDW24945.1| GL23113 [Drosophila persimilis]
Length = 2193
Score = 531 bits (1368), Expect = e-147, Method: Compositional matrix adjust.
Identities = 299/813 (36%), Positives = 453/813 (55%), Gaps = 89/813 (10%)
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILM 562
LS+W LP I + YK++G+ +++ WQ ECL V+ + NLVY A TSAGK+ V+EIL+
Sbjct: 186 LSAWNLPHSILAEYKRKGVVQMFDWQAECLSKPRVVFEHCNLVYSAPTSAGKTLVSEILL 245
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVC 622
L+ ++ GK L++LP++S+ EK +L+ LL P G V ++G VA+C
Sbjct: 246 LKSVLERGKKVLVILPFISVVREKTFYLQDLLTPAGHRVEGFFGGYTPPGGFDSIDVAIC 305
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKANS+VN+++E+G+L IG +V+DE+H+++++ RGY+LELLL K+ Y + +
Sbjct: 306 TIEKANSIVNKLMEQGKLDVIGTVVVDEVHLISEKGRGYILELLLAKILYMSRKN----- 360
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
A +Q++ MSAT+ NV + WL A LY TN+RPV L+E IKVG
Sbjct: 361 --------------ALQIQVITMSATLANVELLRRWLDAELYITNYRPVALQEMIKVGTK 406
Query: 743 IYSKKMDVVRTILTAANLG--GKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV- 799
IY +++ R I + + D DH+ +LC E + EG SV++FC SR CES A +
Sbjct: 407 IYDHQLEFQRDIAQQSEVPCLTNDSDHVAQLCIETLLEGCSVIVFCPSRDWCESLAVQLA 466
Query: 800 ----------SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYH 849
++ ++ N++ E + LR P GLD + + + A+H
Sbjct: 467 IAIHGLIKSGTELSRRLRSNLNPEAIEDVK-----QQLRDIPTGLDSTMSKAVTYACAFH 521
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
HAGLT EER++VE C++ G ++VL ATSTL++GVNLPARRVI R P G++ + YRQ
Sbjct: 522 HAGLTTEERDIVEACFKAGALKVLVATSTLSSGVNLPARRVIIRSPLFGKNQMSSLTYRQ 581
Query: 910 MAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNG-MTHAILEVVA 968
M GRAGRTG DT GES+LIC + L+ P+ SCL D++ + A+LEV++
Sbjct: 582 MIGRAGRTGKDTLGESILICTESNQRVGRDLVQAQLQPISSCLEMDESTHLKRALLEVIS 641
Query: 969 GGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQ-------------DSLRWLCHRKFLEW 1015
G+ T ++I +V CTLL++ K + + Q D L +L +F+
Sbjct: 642 SGVASTRQEIDSFVNCTLLSAEKAMAKLSEEQQVQGGEDCSSHFIDDVLDFLIDYEFIRH 701
Query: 1016 NED----TKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPIN 1071
D T Y T LG A SS+ P + LI+ +L +AR FVL +DLH VYL TP +
Sbjct: 702 QVDEEAGTANYVGTHLGAACLASSMPPGDGLILFAELQKARRTFVLDTDLHAVYLVTPYS 761
Query: 1072 VEVE---PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGL 1128
V + DW LY + + +LS + VG VGV E +L+R G
Sbjct: 762 VCYQLQDLDWLLYLDMWEKLSPAMKRVGELVGVKEAFLIRAMRG---------------- 805
Query: 1129 HGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQAL 1188
KL+Y+ +++ KRFY AL L L+ ETP+ V FK RG++Q L
Sbjct: 806 QSKLDYK-------------QMQIHKRFYTALALKELINETPINVVAHKFKCNRGVLQGL 852
Query: 1189 QENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALY 1248
Q+ + FA +V+ FC+ L W + ++ +F++R+ FG+ ++++L +P + RARA+Y
Sbjct: 853 QQISSTFAGIVTAFCKSLKWSTIALIVEQFKDRLFFGIHIDLIDLMQLPDLSQKRARAIY 912
Query: 1249 KAGLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
AG T + +A A + K L+ S S+ + Q
Sbjct: 913 DAGFTTVVELAGADALVLEKVLYNSLSFDSAKQ 945
Score = 225 bits (573), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 195/676 (28%), Positives = 304/676 (44%), Gaps = 119/676 (17%)
Query: 1519 KHSEANSGVLFE------IHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNV 1572
+ S A LF+ I GL+ C ++ VYY+ + ++
Sbjct: 1614 RESVAGKQALFQVDDSSFIAGLSFCLADNVVYYMCMQEE--------------------- 1652
Query: 1573 LTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSL 1632
E Q + + + + ++M++ ++ + K Q++ L H +Q G +
Sbjct: 1653 ---EGQQVPTRLKVQELCKLMDRPELTLLVHDAKEQVKALLHGVPQLQNIG--------I 1701
Query: 1633 GLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR 1692
+E D + W+L PD S K + ++ + E A AN
Sbjct: 1702 KVE------------------DPKVGHWLLEPDKTVSF-----KNMCQQFAPECTALANL 1738
Query: 1693 --SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADME 1750
SGR + + + ++ + C + L E +E + +E+P+ VL ME
Sbjct: 1739 CGSGRGYSSHGLDSSSAILPKLRASIEACVTVHILKGQIENLERI-EVEMPIQIVLCRME 1797
Query: 1751 LWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG 1810
G + + + L +E K Y + G KF+L + +ANVL H K P G
Sbjct: 1798 CVGFPAKHQRMGRLIKHMLDTLNKVEIKIYKMHGSKFNLGSTQAVANVLGLHRK---PHG 1854
Query: 1811 HNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTL--------AKLLNCTLGSICSLARIS 1862
ST + L+ L PI +I HR L L+ C C RI
Sbjct: 1855 R------VSTSRQVLEKL--GSPISELILNHRKLNMQIVKGMQPLIRC-----CKANRI- 1900
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
HGH + T TATGR+SM EPNLQ V + +M D +I+ R
Sbjct: 1901 --------HGHSI-THTATGRISMSEPNLQNVAKDFDIRMGP----------DSVRISCR 1941
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
F E LL+AD+ Q+E+R++AH S+D AL+ +++ P D+FT IAA W E
Sbjct: 1942 SVFKSMDEKRCLLSADFCQLEMRILAHLSQDKALVSVMNSPQ-DLFTAIAAHWNHIPEAE 2000
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V Q R TK++ YGI+YGMG +L + L C+ +EA+ + F S+PG+ ++ +
Sbjct: 2001 VTEQMRSGTKQICYGIVYGMGMRSLGDALQCTESEAQLICEQFHQSYPGIRAYTEKVLKF 2060
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+ GYVE++ GR+R+L I G +A+RQAVN+ QGSAADI K A++++ I
Sbjct: 2061 ARKLGYVETITGRRRYLDHINSGEQNLIKQAERQAVNTTIQGSAADIAKRAILDMDKNI- 2119
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES--AALLL 2160
G Y + N +L+L +HDELV EV + K + MES L
Sbjct: 2120 -GRYWKKLGVEEN------SIQLVLHIHDELVYEVPEAKAKRIAKFLGLTMESIGKGKLT 2172
Query: 2161 VPLLVKIQVGSTWGSL 2176
VPL VKI++G +WG +
Sbjct: 2173 VPLKVKIKMGESWGEM 2188
>gi|390177772|ref|XP_001358456.3| GA19301 [Drosophila pseudoobscura pseudoobscura]
gi|388859190|gb|EAL27595.3| GA19301 [Drosophila pseudoobscura pseudoobscura]
Length = 1998
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 299/812 (36%), Positives = 452/812 (55%), Gaps = 88/812 (10%)
Query: 505 LSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILM 562
LS+W LP I + YK++G+ +++ WQ ECL V+ + NLVY A TSAGK+ V+EIL+
Sbjct: 186 LSAWNLPHSILAEYKRKGVVQMFDWQAECLSKPRVVFEHCNLVYSAPTSAGKTLVSEILL 245
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVC 622
L+ ++ GK L++LP++S+ EK +L+ LL P G V ++G VA+C
Sbjct: 246 LKSVLERGKKVLVILPFISVVREKTSYLQDLLTPAGHRVEGFFGGYTPPGGFDSIDVAIC 305
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKANS+VN+++E+G+L IG +V+DE+H+++++ RGY+LELLL K+ Y + +
Sbjct: 306 TIEKANSIVNKLMEQGKLGVIGTVVVDEVHLISEKGRGYILELLLAKILYMSRKN----- 360
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
A +Q++ MSAT+ NV + WL A LY TN+RPV L+E IKVG
Sbjct: 361 --------------ALQIQVITMSATLANVELLRRWLDAELYITNYRPVALQEMIKVGTK 406
Query: 743 IYSKKMDVVRTILTAANLG--GKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV- 799
IY ++ R I + + D DH+ +LC E + EG SV++FC SR CES A +
Sbjct: 407 IYDHHLEFQRDITQQSEVPCLTNDSDHVAQLCIETLLEGCSVIVFCPSRDWCESLAVQLA 466
Query: 800 ----------SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYH 849
++ ++ N++ E + LR P GLD + + + A+H
Sbjct: 467 IAIHGLIKSGTELSRRLRSNLNPEAIEDVK-----QQLRDIPTGLDSTMSKAVTYACAFH 521
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
HAGLT EER++VE C++ G ++VL ATSTL++GVNLPARRVI R P G++ + YRQ
Sbjct: 522 HAGLTTEERDIVEACFKAGALKVLVATSTLSSGVNLPARRVIIRSPLFGKNQMSSLTYRQ 581
Query: 910 MAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNG-MTHAILEVVA 968
M GRAGRTG DT GES+LIC + L+ P+ SCL D++ + A+LEV++
Sbjct: 582 MIGRAGRTGKDTLGESILICTESNQRVGRDLVQAQLQPISSCLEMDESTHLKRALLEVIS 641
Query: 969 GGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQ------------DSLRWLCHRKFLEWN 1016
G+ T ++I +V CTLL++ K + + Q D L +L +F+
Sbjct: 642 AGVASTRQEIDSFVNCTLLSAEKAMAKLSEEQQQGAEDCSSHFIDDVLDFLVDYEFIRHQ 701
Query: 1017 ED----TKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV 1072
D T Y T LG A SS+ P + LI+ +L +AR FVL +DLH VYL TP +V
Sbjct: 702 VDEEAGTANYVGTHLGAACLASSMPPGDGLILFAELQKARRTFVLDTDLHAVYLVTPYSV 761
Query: 1073 EVE---PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLH 1129
+ DW LY + + +LS + VG VGV E +L+R G
Sbjct: 762 CYQLQDLDWLLYLDMWEKLSPAMKRVGELVGVKEAFLIRAMRG----------------Q 805
Query: 1130 GKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQ 1189
KL+Y+ +++ KRFY AL L L+ ETP+ V FK RG++Q LQ
Sbjct: 806 SKLDYK-------------QMQIHKRFYTALALKELINETPIHVVAHKFKCNRGVLQGLQ 852
Query: 1190 ENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYK 1249
+ + FA +V+ FC+ L W + ++ +F++R+ FG+ ++++L +P + RARA+Y
Sbjct: 853 QISSTFAGIVTAFCKSLKWSTIALIVEQFKDRLFFGIHIDLIDLMQLPDLSQKRARAIYD 912
Query: 1250 AGLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
AG T + +A A + K L+ S S+ + Q
Sbjct: 913 AGFTTVVELAGADALVLEKVLYNSLSFDSAKQ 944
Score = 222 bits (566), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 226/451 (50%), Gaps = 55/451 (12%)
Query: 1736 LNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADI 1795
+ +E+P+ VL ME G + + + L +E K Y + G KF+L + +
Sbjct: 1588 IEVEMPIQIVLCRMECVGFPAKHQRMGRLIKHMLDTLNKVEIKIYKMHGSKFNLGSTQAV 1647
Query: 1796 ANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTL--------AKL 1847
ANVL H K P G ST + L+ L PI +I HR L L
Sbjct: 1648 ANVLGLHRK---PHGR------VSTSRQVLEKL--GSPISELILNHRKLNMQIVKGMQPL 1696
Query: 1848 LNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDI 1907
+ C C RI HGH + T TATGR+SM EPNLQ V + +M
Sbjct: 1697 IRC-----CKANRI---------HGHSI-THTATGRISMSEPNLQNVAKDFDIRMGP--- 1738
Query: 1908 YGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDV 1967
D +I+ R F E LL+AD+ Q+E+R++AH S+D AL+ +++ P D+
Sbjct: 1739 -------DSVRISCRSVFKSMDEKRCLLSADFCQLEMRILAHLSQDKALVSVMNSPQ-DL 1790
Query: 1968 FTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKS 2027
FT IAA W E V Q R TK++ YGI+YGMG +L + L C+ +EA+ + F
Sbjct: 1791 FTAIAAHWNHIPEAEVTEQMRSGTKQICYGIVYGMGMRSLGDALQCTESEAQLICEQFHQ 1850
Query: 2028 SFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAA 2087
S+PG+ ++ + + GYVE++ GR+R+L I G +A+RQAVN+ QGSAA
Sbjct: 1851 SYPGIRAYTEKVLKFARKLGYVETITGRRRYLDHINSGEQNLIKQAERQAVNTTIQGSAA 1910
Query: 2088 DIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVS 2147
DI K A++++ I G Y + N +L+L +HDELV EV + K
Sbjct: 1911 DIAKRAILDMDKNI--GRYWKKLGVEEN------SIQLVLHIHDELVYEVPEAKAKRIAK 1962
Query: 2148 LVQKCMES--AALLLVPLLVKIQVGSTWGSL 2176
+ MES L VPL VKI++G +WG +
Sbjct: 1963 FLGLTMESIGKGKLTVPLKVKIKMGESWGEM 1993
>gi|328782961|ref|XP_001120279.2| PREDICTED: DNA polymerase theta [Apis mellifera]
Length = 1864
Score = 528 bits (1359), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/813 (38%), Positives = 465/813 (57%), Gaps = 69/813 (8%)
Query: 485 EKSDEAGTPSSSGMLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRR- 542
EK+ E S +D LSSW LP I Y+ +G++ ++ WQVECL V+++
Sbjct: 79 EKTSEINPFISIIPTQDRCKLSSWGLPLNILQKYEAKGVTTMFAWQVECLSNQKVIEKNC 138
Query: 543 NLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVR 602
NLVY A TSAGK+ +AEILM++ ++ K + +LP+VS+ EK + + LL G V
Sbjct: 139 NLVYSAPTSAGKTLIAEILMIKTVLERQKKVIFILPFVSVVREKMYYFQDLLSDSGVRVE 198
Query: 603 SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
+ G T +A+ TIEKANSL+N ++EE L +G +++DELH+V D NRGYL
Sbjct: 199 GFMGGIAPSGGFATTHIAIATIEKANSLINHLMEEKELINLGAVIVDELHLVGDPNRGYL 258
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAA 722
LELLLTKLRY D +Q++GMSAT+PN++ +A WL A
Sbjct: 259 LELLLTKLRYMTSR------------------DENINIQLIGMSATLPNLSLLAKWLDAE 300
Query: 723 LYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSV 782
LY+T FRP+PL E K+G IY K+ ++R++ L D D I+ LC E + +GHSV
Sbjct: 301 LYKTEFRPIPLNEQCKIGRNIYDNKLCLIRSLTPMPELT-MDSDDILHLCIETISDGHSV 359
Query: 783 LIFCSSRKGCESTARHVSKFLKKF--------SINVHSSDSEFIDITSAIDALRRCPAGL 834
LIFCS++ CE A ++ K I DSE I + ++ L+R P GL
Sbjct: 360 LIFCSTKNWCEKLAEQIAIAFCKLGRENTQLGKILRDQLDSELI--SETLEQLKRSPTGL 417
Query: 835 DPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQ 894
D VL+ T+ G+A+HHAGLT++ER+++E +R G +RVL ATSTL++GVNLPARRVI R
Sbjct: 418 DNVLKNTVSFGIAFHHAGLTMDERDIIEGSFRSGSLRVLIATSTLSSGVNLPARRVIIRS 477
Query: 895 PRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSE 954
P+ +D Y QM GRAGR G DT GES+LICKP E K L++ S P+ SCL E
Sbjct: 478 PKFAGKLLDSLTYHQMIGRAGRMGKDTAGESILICKPNEQKSAEALISASLEPIESCL-E 536
Query: 955 DKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFL- 1013
D + A+LE VA +V T D+ Y+ CTL+N + + D ++++L +FL
Sbjct: 537 DSAPLIRALLEAVASEVVYTPSDLELYINCTLVNLSNEY-DSKDLWNKAIKFLVDNEFLL 595
Query: 1014 --EWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI- 1070
+ E + T G+A +S+ P E L++L++L +AR FVL ++LH++YL TP+
Sbjct: 596 LQKTEEGHNRWVATAFGKACLAASIAPREGLLLLEELQKARRCFVLDTELHVIYLVTPLT 655
Query: 1071 --NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGL 1128
N DW + E + LS ++ VG VGV E +L G
Sbjct: 656 SGNQIGSIDWMTFLELWKMLSESERRVGQLVGVEERFLTSAVRG---------------- 699
Query: 1129 HGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQAL 1188
++ + L + KRFY AL L LV+E P+ VC+ + RG++Q L
Sbjct: 700 --------------IVRQGKLLSIHKRFYTALALHDLVREIPLNSVCKKYGCCRGVLQTL 745
Query: 1189 QENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALY 1248
Q++A FA M++ FC++LGW +E L+++FQ R+ FGV E+++L +P + G RAR+LY
Sbjct: 746 QQSASTFAGMITQFCKQLGWDCMELLVSQFQTRLQFGVCRELLDLLRLPMLNGLRARSLY 805
Query: 1249 KAGLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
K G+ + +A A+ ++ +AL+++ + +E +
Sbjct: 806 KHGITSVADLAIANELDVERALYKALPFESEKE 838
Score = 253 bits (645), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/465 (35%), Positives = 269/465 (57%), Gaps = 48/465 (10%)
Query: 1727 VSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMK 1786
+S L+ +IE+ ++ +LA MEL G+GV ++ +++++++ LE++AY L G K
Sbjct: 1433 LSPTLLYTFKDIEMKIIILLAYMELTGLGVCLKSLQDLSSVIREEMISLEERAYALCGKK 1492
Query: 1787 FSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAK 1846
F+ ++ ++ +L G KGK+ S +K L + +HPI ++ R L
Sbjct: 1493 FNFSSSKEVGEIL----------GLYKGKK-ISVNKAVLG--QSDHPISNLVMSWRKL-- 1537
Query: 1847 LLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNED 1906
N T I ++++ +HG+ + TST TGR+SM EPNLQ V +F
Sbjct: 1538 --NVTKSKII-YPLLNLAQHSSRIHGNCV-TSTLTGRISMHEPNLQNVPR--DF------ 1585
Query: 1907 IYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
N++ + I+ R FIP+ N I+L+ADY Q+ELR++AHFSKD L ++ KP GD
Sbjct: 1586 ----NSKDNSFTISVRMAFIPTVGN-IILSADYCQLELRILAHFSKDTILCNIMRKP-GD 1639
Query: 1967 VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFK 2026
+F IAA+W SE+ V + R TK+L YG++YGMG TL+E L+ +AKE ++SF
Sbjct: 1640 IFKNIAAKWNHVSENEVDDKMRRHTKQLCYGMIYGMGVKTLAENLSVDEVKAKEFLESFM 1699
Query: 2027 SSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSA 2086
+++PG++ WL+ + GY+ ++ R+R + N EKS+A+RQAVN+ QGSA
Sbjct: 1700 NAYPGISKWLNNVLEEARINGYITTILERRRMFPGLTSINPMEKSQAERQAVNTKVQGSA 1759
Query: 2087 ADIIKIAMINIHSIIVGGVYKPDSSL----AANFQMLKGRCR--------LLLQVHDELV 2134
ADI+K AMI+I + ++ +SL A + + L+ + L+LQ+HDEL+
Sbjct: 1760 ADIVKKAMIDIEKRM---RFEFSTSLPIMPANSSRKLRSNSKETQHKGGYLVLQLHDELL 1816
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
EV+ +++ ++V++ ME L VPL VK++VG TWG+L +
Sbjct: 1817 YEVNIYDLRQVATIVKESMEQVCQLTVPLPVKLKVGPTWGNLSEY 1861
>gi|195571337|ref|XP_002103660.1| GD20545 [Drosophila simulans]
gi|194199587|gb|EDX13163.1| GD20545 [Drosophila simulans]
Length = 1025
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 332/896 (37%), Positives = 488/896 (54%), Gaps = 105/896 (11%)
Query: 429 FKCHHDNTSRTEGI-SDVQEKDSVLIVHERKLDISSQGIDSITSDSPTNVIKKPVGNEKS 487
F C + +E + D+ SVL E +I Q +++S SP + P N
Sbjct: 130 FLCPAQDEEASEQLKEDILLSHSVLAKQEFYQEIL-QVTQNLSSMSPNQLRVSP--NSSR 186
Query: 488 DEAGTPSSSGM---LKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRR 542
P M L +S+W LP I YKK+G+ +++ WQVECL +L +
Sbjct: 187 IREAVPERPAMPLDLNSLRPISAWNLPMSIQEEYKKKGVVQMFDWQVECLSNPKLLFEHC 246
Query: 543 NLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVR 602
NLVY A TSAGK+ V+EI+ML+ ++ GK LL+LP++S+ EK +++ LL P G V
Sbjct: 247 NLVYSAPTSAGKTLVSEIMMLKTVLERGKKVLLILPFISVVREKMFYMQDLLTPAGYRVE 306
Query: 603 SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
+YG + VA+CTIEKANS+VN+++E+G+L IG++V+DE+H+++D+ RGY+
Sbjct: 307 GFYGGYTPPGGFESLDVAICTIEKANSIVNKLMEQGKLETIGMVVVDEVHLISDKGRGYI 366
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQI--VGMSATMPNVAAVADWLQ 720
LELLL K+ Y + +GLQI + MSAT+ NV + WL
Sbjct: 367 LELLLAKILYMSRR---------------------NGLQIQVITMSATLANVQLLQSWLD 405
Query: 721 AALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAAN-LGG--KDPDHIVELCDEVVQ 777
A LY T++RPV L+E IKVG IY + ++R + L G D D + LC E +
Sbjct: 406 AELYITHYRPVALKEMIKVGTVIYDHSLKLIRDVAKEKEFLKGLENDSDDVALLCIETLL 465
Query: 778 EGHSVLIFCSSRKGCESTARHVSKFL-----------KKFSINVHSSDSEFIDITSAIDA 826
EG SV++FC S+ CE+ A ++ + ++ N+ I
Sbjct: 466 EGCSVIVFCPSKDWCENLAVQLATAIHGQIKSGTVLGQRLRANLDPR-----AIAEVKQQ 520
Query: 827 LRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLP 886
LR P GLD V+ + + A+HHAGLT EER++VE ++ G ++VL ATSTL++GVNLP
Sbjct: 521 LRDIPTGLDAVMSKAITYACAFHHAGLTTEERDIVEASFKAGALKVLVATSTLSSGVNLP 580
Query: 887 ARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMG--LLNES 944
ARRV+ R P G + YRQM GRAGR G DT GES+LIC E+ MG L+
Sbjct: 581 ARRVLIRSPLFGGKQMSSLTYRQMIGRAGRMGKDTLGESILICN--EINARMGRDLVLSD 638
Query: 945 CPPLHSCLSEDKNGMTH---AILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKS-- 999
P+ SCL D +G TH A+LEV++ G+ T EDI +V CTLL++ K F K
Sbjct: 639 LQPITSCL--DMDGSTHLKRALLEVISSGVANTKEDIDFFVNCTLLSAEKDFHAKEKPPD 696
Query: 1000 -------AQDSLRWLCHRKF--LEWNE--DTKLYSTTPLGRAAFGSSLCPEESLIVLDDL 1048
D+L +L +F L+ NE +T +Y T LG A SS+ P + LI+ +L
Sbjct: 697 EEPDDNYINDALDFLVEYEFVRLQRNEEKETAVYVATRLGAACLASSMPPTDGLILFAEL 756
Query: 1049 SRAREGFVLASDLHLVYLSTPINVEVE---PDWELYYERFLELSALDQSVGNQVGVSEPY 1105
++R FVL S+LH VYL TP +V + DW LY + +LS+ + VG VGV + +
Sbjct: 757 QKSRRSFVLESELHAVYLVTPYSVCYQLQDLDWLLYVNMWEKLSSPMKKVGELVGVRDAF 816
Query: 1106 LMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRL 1165
L S LR T KL+Y+ +++ KRFY+AL L L
Sbjct: 817 L-----------SKALRGQT-----KLDYK-------------QMQIHKRFYIALALEEL 847
Query: 1166 VQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFG 1225
V ETP+ V FK RGM+Q+LQ+ A FA +V+ FC L W L ++++F++R+ FG
Sbjct: 848 VNETPINVVVHKFKCHRGMLQSLQQMAATFAGIVTAFCNSLQWSTLALIVSQFKDRLFFG 907
Query: 1226 VRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
++ ++++L IP + RARAL+ AG+ + + +A A + K L+ S S+ + Q
Sbjct: 908 IQRDLIDLMRIPDLSQKRARALFDAGITSLVELAGADALVLEKVLYNSLSFDSAKQ 963
>gi|156552095|ref|XP_001605062.1| PREDICTED: DNA polymerase theta-like [Nasonia vitripennis]
Length = 2242
Score = 524 bits (1350), Expect = e-145, Method: Compositional matrix adjust.
Identities = 301/782 (38%), Positives = 453/782 (57%), Gaps = 65/782 (8%)
Query: 503 LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQR-RNLVYCASTSAGKSFVAEI 560
L+L+SW LP I YK RGI ++PWQVECL +L+ +NLVY A TSAGK+ VAE
Sbjct: 162 LELASWGLPPLILEKYKARGIKTMFPWQVECLANKKILEENKNLVYSAPTSAGKTLVAEF 221
Query: 561 LMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVA 620
LML+ ++ K A+ +LP+VS+ EK + + LL G V + G +A
Sbjct: 222 LMLKTVLERKKKAIFILPFVSVVREKMFYFQDLLSDSGVRVEGFMGGVAPAGGFSAVHIA 281
Query: 621 VCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSD 680
+ TIEKANSLVNR++E+G L +G +VIDELH++ D RGYLLELLLTKLRY
Sbjct: 282 IATIEKANSLVNRLMEDGDLVTLGAVVIDELHLLGDPGRGYLLELLLTKLRYMT------ 335
Query: 681 SSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVG 740
S + D +Q++GMSAT+PN+ +ADWL A LY+T+FRP+PL E K G
Sbjct: 336 --------LSVEEVD----IQLIGMSATLPNLPLIADWLDAELYKTDFRPIPLNEQCKFG 383
Query: 741 NAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVS 800
+++ K +++R + A ++ D D+I++LC E + GH LIFC ++ CE A ++
Sbjct: 384 SSLLDAKKNIIRELQPAPDIVN-DTDNIIQLCIETINGGHGTLIFCPTKNWCEKLAIQLA 442
Query: 801 KFLKKFSIN------VHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
+ + + + E + + L+ CP GLD VL +T+ GVA+HHAGLT
Sbjct: 443 TTFFQLGRDNTPHGQILRKNIELESLQEVLLQLKSCPVGLDSVLRKTVSYGVAFHHAGLT 502
Query: 855 VEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA 914
++ER+++E +R G ++VL ATSTL++GVNLPARRVI R P +D Y+QM GRA
Sbjct: 503 MDERDIIEGGFRVGSLKVLIATSTLSSGVNLPARRVIIRSPMFNGKPLDKLTYQQMIGRA 562
Query: 915 GRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQT 974
GR G DT+GES+L+CKP E + L+ S P+ SCL E + A+LE VA +V+T
Sbjct: 563 GRMGKDTEGESILVCKPNERQAATTLMTSSLDPIVSCL-EGSGPLIRALLEAVASQVVRT 621
Query: 975 AEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFL---EWNEDTKLYSTTPLGRAA 1031
E + Y +CT + + +V + +++++L +FL + E K T LG+A
Sbjct: 622 PEHLDFYSKCTFVYKCEE-SEVKEMVDEAVKFLIANEFLLVKDSEEKEKRMVATCLGKAC 680
Query: 1032 FGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEV---EPDWELYYERFLEL 1088
+S+ P E L + ++L RAR+ FVL ++LH++YL TP N + DW ++ E + L
Sbjct: 681 LSASIPPREGLFLFEELQRARKCFVLDTELHVIYLVTPFNSGSQINQIDWMIFLELWRAL 740
Query: 1089 SALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQ 1148
S ++ VG VGV E +LM G ++ +
Sbjct: 741 SESERRVGQLVGVDERFLMTSMRG------------------------------IVKAGK 770
Query: 1149 TLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGW 1208
L + +RF+ A+ L LV+E P+ VC+ + RG++Q+LQ+++ FA MV+ FC+ L W
Sbjct: 771 PLNIHRRFFTAMALHDLVREVPLNTVCKKYNCCRGLLQSLQQSSATFAGMVTNFCKELKW 830
Query: 1209 YDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVK 1268
+E L A+FQ R+ FGV ++++L +P + G RAR+L+K G+ T +A A+ E+ +
Sbjct: 831 DCMELLFAQFQARLQFGVCRDLLDLLRLPSLNGLRARSLFKHGITTAAELAVANEIEVEE 890
Query: 1269 AL 1270
AL
Sbjct: 891 AL 892
Score = 192 bits (489), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 198/354 (55%), Gaps = 33/354 (9%)
Query: 1732 IEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYT 1791
+ A +IE+P + +LA+MEL G G+++E + +++ L +E++A+ AG KF+ Y+
Sbjct: 1897 LSAYKDIEMPTILILANMELRGFGINVESLQELATVIKNDLGRIEEEAFRAAGRKFNFYS 1956
Query: 1792 AADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCT 1851
+ +++ VL G NK + T+K+ L E+PI ++ R L +
Sbjct: 1957 SKEVSQVL----------GLNK-RGRACTNKNALK--SCENPISNLVTLWRKLTTVQTKI 2003
Query: 1852 LGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGN 1911
+ + L R + +HG+ + T T TGR+SM EPNLQ + +FK DI G
Sbjct: 2004 VFPLLQLER-----KNNRIHGNCI-TYTVTGRVSMHEPNLQTIPR--DFK---SDISG-- 2050
Query: 1912 AEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMI 1971
C ++ R F+P+ N I+L+AD+ Q+ELR++AHFS+DP L LL GD+F I
Sbjct: 2051 -----CILSVRMAFVPASGN-IMLSADFCQLELRILAHFSQDPVLCKLLHG-KGDIFKSI 2103
Query: 1972 AARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPG 2031
AAR +E+ V R + K+L Y ++YGMG +L+E L+ + +EAK+ +++F ++ G
Sbjct: 2104 AARLNKTTEEQVDDDMRQRAKQLCYAMIYGMGAKSLAETLSATESEAKDYLEAFMGTYKG 2163
Query: 2032 VASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGS 2085
+ WL +G+V ++ R+R L I + KS+A+RQAVN+ QGS
Sbjct: 2164 IRVWLTGVCEQARVEGFVSTIANRRRILPGINSKISAVKSQAERQAVNTKVQGS 2217
>gi|357617715|gb|EHJ70955.1| putative DNA polymerase theta [Danaus plexippus]
Length = 1279
Score = 521 bits (1342), Expect = e-144, Method: Compositional matrix adjust.
Identities = 299/773 (38%), Positives = 450/773 (58%), Gaps = 64/773 (8%)
Query: 525 LYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSIC 583
++ WQVECL VL +NL+Y A TSAGK+ VAE+L ++ ++ K +++LP+VSI
Sbjct: 1 MFDWQVECLSNPKVLIDCQNLLYSAPTSAGKTLVAELLTIKTVLERQKKVIIILPFVSIV 60
Query: 584 AEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEI 643
EK +L+ +L G V + G+Q + +A+CTIEKANSL+N++L+EG +SE+
Sbjct: 61 REKMFYLQDILSSSGIRVEGFMGSQTPPGGLQAVHIAICTIEKANSLINKLLDEGNISEL 120
Query: 644 GIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIV 703
G +V+DELH++ D +RGY+LELLLTK++Y A + S +QI+
Sbjct: 121 GAVVVDELHLLGDPHRGYILELLLTKIKYTASKLNDLS------------------IQII 162
Query: 704 GMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGK 763
GMSAT+PN+ +ADWL+A L+ T FRP+PL E VG+ Y+KK + + +L +NL
Sbjct: 163 GMSATLPNLKMLADWLEAHLFITEFRPIPLIESCLVGDKYYNKKGEHI-GMLCKSNLKEI 221
Query: 764 DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV-SKFLKKFSIN-----VHSSDSEF 817
D D ++ +C E ++ SVLIFC ++ CE+ A+ + S F K +N + +
Sbjct: 222 DDDSVLLICLETIKSSCSVLIFCMTKNRCENLAQSIASSFFKLGCMNNEQGMILREQLKT 281
Query: 818 IDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATS 877
I ++ L+ CP GLDPVL+ + GVAYHHAGLT +ER+++E ++ G VRVL ATS
Sbjct: 282 SSILEVLEQLKGCPVGLDPVLKNIISFGVAYHHAGLTFDERDIIEGAFKSGAVRVLVATS 341
Query: 878 TLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKI 937
TL++GVNLPAR+VI R P + I+ Y+QM GRAGR G DTKGES+LIC P E K
Sbjct: 342 TLSSGVNLPARKVIIRCPMFQKQPINILTYKQMVGRAGRMGKDTKGESILICTPNEQKIG 401
Query: 938 MGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLL---NSTKPFQ 994
L+ P+ SC+ E ++ A+LE++A V T E + Y + TLL S P Q
Sbjct: 402 FDLMMGDLDPVKSCI-ETEDKFMRAVLEMIASQDVCTEEQLDLYSKSTLLFSQQSLHPSQ 460
Query: 995 DVVKSAQDSLRWLCHRKFLEWNEDTK--LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAR 1052
+ + D+L+ L + + + +D + Y T LG+A SS+ P + + + +L +AR
Sbjct: 461 NFL--LNDTLKELVNYELVRIQKDGEEIRYVATSLGKACLSSSMSPNDGISLFCELQKAR 518
Query: 1053 EGFVLASDLHLVYLSTPINVEVE---PDWELYYERFLELSALDQSVGNQVGVSEPYLMRM 1109
+ VL +DLHL+YL TP +V + DW + L++ + VG VGV E +++R
Sbjct: 519 QCLVLETDLHLIYLVTPYSVSNQWNNIDWLHLLTLWESLTSAMKRVGELVGVQESFIIRC 578
Query: 1110 AHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQET 1169
G +N ++ L + KRFY AL L LV E
Sbjct: 579 LRG---------------------------TNKNNNNQNKLNIHKRFYTALALQDLVNEV 611
Query: 1170 PVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAE 1229
P+ EV F+ ARG +Q LQ+ + FA MV+ FC +LGW ++E +I++FQ+R+ FG+ +E
Sbjct: 612 PLSEVAGKFQCARGFLQGLQQASATFAGMVTSFCHQLGWKNMEMIISQFQDRLHFGIHSE 671
Query: 1230 IVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQR 1282
++EL + + G RAR L+ AG T +IA A ++ I AL +S + +E QR
Sbjct: 672 LLELMKLSSLNGVRARTLFNAGFETVASIASAEVNVIENALHKSVPFQSEKQR 724
Score = 226 bits (575), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 240/459 (52%), Gaps = 54/459 (11%)
Query: 1727 VSEE--LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK--LRYLEKKAYTL 1782
+S+E ++E +LN EI + +L D E GI VD + L +R L+ K L+KKA+ +
Sbjct: 864 ISQETLVMEKILNTEIQVCKILGDCEYHGITVDKD--LVSRFLIDVKNSQEILQKKAFKI 921
Query: 1783 AGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHR 1842
G F+ ++ D+A VL G KG++ ST K L H P+ +I R
Sbjct: 922 CGYHFNFNSSKDVAKVL----------GLYKGRK-TSTRKSVLS--AHNSPMSSIIIYWR 968
Query: 1843 TLAKLLNCTLGSI----CSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMV 1898
L +L +L I C + + YT++ T TGR+SM EPNLQ +
Sbjct: 969 KLNSILTKSLYPITEQACVYTEDNRISPSYTMY-------TCTGRISMHEPNLQNLPR-- 1019
Query: 1899 EFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIG 1958
+F + + + D + N R F + ++ ++ADY Q+E+R++ HFSKD L
Sbjct: 1020 KFTIPANYLCDNESCDDVIEFNCRKIF-RAAPGYVFISADYCQLEMRILTHFSKDVTLTR 1078
Query: 1959 LLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEA 2018
++ DVF IAA W+G E V R + K+L YGILYGMG TLS+ LN + EA
Sbjct: 1079 IMGS-DVDVFKSIAASWSGVPEHEVDEDLRHKAKQLCYGILYGMGNRTLSQHLNVTELEA 1137
Query: 2019 KEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAV 2078
+ F ++P + + + C +KGYVE+L R+R+L I ++S A+RQAV
Sbjct: 1138 AYFMDMFYKTYPSIKVFTASLIEECRKKGYVETLMKRRRYLPNINSSVPSKRSAAERQAV 1197
Query: 2079 NSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVD 2138
N+ QGSAADI K AM +I + SS RL+LQ+HDEL+ EV
Sbjct: 1198 NTTIQGSAADIAKSAMCSIQ--------QSTSS------------RLILQMHDELIYEVP 1237
Query: 2139 PSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+ ++ + +++K ME+ L VPL VKI+ G TWG++E
Sbjct: 1238 VNNKQDFIVILKKSMENTVRLNVPLPVKIKCGQTWGTME 1276
>gi|390336212|ref|XP_788319.3| PREDICTED: uncharacterized protein LOC583312 [Strongylocentrotus
purpuratus]
Length = 3938
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 300/807 (37%), Positives = 444/807 (55%), Gaps = 108/807 (13%)
Query: 500 KDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVA 558
+D L LSSW LP + Y + GI+K++PWQVECL VL+ NLVY A TSAGK+ VA
Sbjct: 1227 RDQLLLSSWGLPDVVLQQYHRAGITKMFPWQVECLGAGRVLEGGNLVYAAPTSAGKTLVA 1286
Query: 559 EILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTS 618
E+L+L++++ T K AL++LP+VS+ EK +L+ + G V + G+ T
Sbjct: 1287 ELLVLKKILETKKKALIILPFVSVTREKMFYLQSMFSEAGVRVDGFMGSHSPPGGLASTD 1346
Query: 619 VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGT 678
+A+CTIEKANSL+NR+LEE + ++GI+V+DELHM+ D +RGYLLELLLTK+RY T
Sbjct: 1347 IAICTIEKANSLINRLLEEKTIGQLGIVVVDELHMIGDSHRGYLLELLLTKIRYVTA--T 1404
Query: 679 SDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+ S G+ G + VPL E++K
Sbjct: 1405 TLKSPGDGDGAR--------------------------------------QSVPLTEHVK 1426
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSR----KGCES 794
+G A++ M VR + + D D + LC E + +G+ VL+FC ++ K CE
Sbjct: 1427 IGKAVFDSSMSKVREVKPPFEVK-VDEDQVFSLCLETISKGNGVLVFCPTKNWCEKLCEM 1485
Query: 795 TARHV------------SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETL 842
AR + + F+K + N+ + + ++ LRR P ++ VL +T+
Sbjct: 1486 MAREIYNMHQGQVTTNQTGFVK--ASNMLPLKLDHASLRDVVEQLRRTPVSINSVLRKTI 1543
Query: 843 PSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFI 902
P GV YHHAGLT +ER+++E +R G +++L ATSTL++GVNLPARRVI R R I
Sbjct: 1544 PCGVGYHHAGLTFDERDIIEGAFRHGFLKILVATSTLSSGVNLPARRVIIRSIMFNRKVI 1603
Query: 903 DGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK-----N 957
D Y+QM GRAGR GIDT+GES+L+CK E K L+ PP+ SCL + + N
Sbjct: 1604 DPLTYKQMIGRAGRKGIDTEGESILVCKTTERDKASKLMRAELPPVQSCLIKSQGDDLSN 1663
Query: 958 GMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDS-----LRWLCHRKF 1012
+ AILE++A G+ + ++ Y TLL ++ +V Q S L KF
Sbjct: 1664 SLKRAILEIIASGVASSPTEVQAYASSTLLAAS--LSEVKTDDQGSGVNTGSAVLSCVKF 1721
Query: 1013 LEWN------------EDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD 1060
LE N E T+ Y T LG+A S+L P E+L V +L +AR+ FVL ++
Sbjct: 1722 LEENEFIRLQNVECEGETTEKYCPTQLGKATLSSALSPGEALQVFAELQKARKNFVLENE 1781
Query: 1061 LHLVYLSTPI-NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISS 1119
LH++Y TPI N +PDW + + ++S+ + V VGV E +LMR + G +SS
Sbjct: 1782 LHILYQVTPIYNQGFQPDWYQFVCTWEKMSSDQRRVAELVGVEESFLMRASQGL---VSS 1838
Query: 1120 KLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFK 1179
R S N+ +++ + +RFY LIL LV E P+ V +
Sbjct: 1839 ASR-----------------SANV---QKSIAIHRRFYTTLILHELVNEVPLPTVAAKYS 1878
Query: 1180 VARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYV 1239
G +Q+LQ++A F+ MV+VFC RLGW++LE L+A+F+NR++FG++ E+ +L I +
Sbjct: 1879 CGFGQLQSLQQSASTFSGMVTVFCSRLGWWNLELLLAQFKNRLNFGIQRELCDLVRISLL 1938
Query: 1240 KGSRARALYKAGLRTPLAIAEASISEI 1266
RAR LY AG T A+A + ++
Sbjct: 1939 NAQRARLLYDAGYPTVAAVATCNPDDV 1965
Score = 260 bits (665), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 211/763 (27%), Positives = 328/763 (42%), Gaps = 221/763 (28%)
Query: 1531 IHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEM-IKQRWKRI 1589
+ G+AVCW Y+V+L K++ G++D + P++ + + R +I
Sbjct: 3277 VTGIAVCWGGKDAYFVSLQKEI-----------TEGNADDTLAPPDNAPNLSVSDRLSKI 3325
Query: 1590 GEIMEKRDV---------RKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSS 1640
++E + RK + K Q ++L A G L G+ LE
Sbjct: 3326 RPVLEIEKLGRTAKAKYHRKVVFGAKHQYKILSQAC-------GCLLAGS---LE----- 3370
Query: 1641 FLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQM 1700
D I W++ P S PNL+ V + ++A
Sbjct: 3371 -------------DPKIAQWLIDPG---SKEPNLQSLVTQYTPTDA-------------- 3400
Query: 1701 RRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEG 1760
L+ L+ +E+P + LA +EL GIG+D
Sbjct: 3401 ------------------------YLLEGPLLFLFPQVEMPSIVTLARVELNGIGIDGAE 3436
Query: 1761 CLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPI------------- 1807
C + ++Q KL+ LE++AY +AG FSL + D+A VLY LKLP
Sbjct: 3437 CETQKAVMQAKLKCLEEEAYKIAGHGFSLTSPDDVAQVLYTELKLPPNGDPSSLSTSAAA 3496
Query: 1808 -------PEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLAR 1860
G + +H ST K L+ L+ HP+ +I E R ++ ++A+
Sbjct: 3497 PARRTLGARGRPRLSKHFSTSKDALEKLKPLHPLPALILEFRRIS----------AAVAK 3546
Query: 1861 ISMSTQKYTLHGHWL---------QTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG-- 1909
+ QK +H L QT TATGR++ EPN+Q + EF + + G
Sbjct: 3547 VVFPLQKEKVHNGRLDMDRVFTVYQTHTATGRVATFEPNIQAIPK--EFDIDMPSVIGES 3604
Query: 1910 -------------GNAEVDHCK------------------------------INARDFFI 1926
+ V C+ + R+ F
Sbjct: 3605 PPGGGAAAGTGSFAPSAVSSCRSKKGRMTRVGAYTPLTMSSGPTPMPGPKFAVCIRNVFC 3664
Query: 1927 PSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQ 1986
P + ++LAADYSQ+ELRL+AH +KD L+ +L+ DVF IAA+W DSV ++
Sbjct: 3665 PFK-GGLMLAADYSQLELRLLAHLAKDRCLMSILNS-GSDVFKQIAAKWKHVDVDSVTAE 3722
Query: 1987 ERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQK 2046
+R Q K++ YG++YG+G L EQL +A ++SFKS + G+ ++L V C +K
Sbjct: 3723 QRQQAKQMCYGMIYGIGARALGEQLGVCEEDAAAFMESFKSQYKGMKNYLLEVVKQCREK 3782
Query: 2047 GYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVY 2106
GYV++L GR+R+L I N +++A+RQAVN+ QGSAAD++K AM+ I
Sbjct: 3783 GYVQTLTGRRRYLPAIHHTNPGARNQAERQAVNTTVQGSAADLVKTAMVKI--------- 3833
Query: 2107 KPDSSLAANFQMLK---------------GRCR-----------------LLLQVHDELV 2134
D LA + K GR + L+LQ+HDEL+
Sbjct: 3834 --DRRLAVEYPATKRSHKHKEEEESGTAPGRRKSRRLQTSTTGFTPPGAFLVLQLHDELI 3891
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
EV + + L++ ME+A L V L VK++ G TWG+LE
Sbjct: 3892 YEVRREDVDQVAQLIKTEMENAMKLSVRLPVKVKFGPTWGTLE 3934
Score = 190 bits (482), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 3/190 (1%)
Query: 500 KDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVA 558
+D L LSSW LP + Y + GI+K++PWQVECL VL+ NLVY A TSAGK+ VA
Sbjct: 527 RDQLLLSSWGLPDVVLQQYHRAGITKMFPWQVECLGAGRVLEGGNLVYAAPTSAGKTLVA 586
Query: 559 EILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTS 618
E+L+L++++ T K AL++LP+VS+ EK +L+ + G V + G+ T
Sbjct: 587 ELLVLKKILETKKKALIILPFVSVTREKMFYLQSMFSEAGVRVDGFMGSHSPPGGLASTD 646
Query: 619 VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGT 678
+A+CTIEKANSL+NR+LEE + ++GI+V+DELHM+ D +RGYLLELLLTK+RY T
Sbjct: 647 IAICTIEKANSLINRLLEEKTIGQLGIVVVDELHMIGDSHRGYLLELLLTKIRYVT--AT 704
Query: 679 SDSSSGENSG 688
+ SSG+ G
Sbjct: 705 TLKSSGDGDG 714
>gi|340371793|ref|XP_003384429.1| PREDICTED: DNA polymerase theta-like [Amphimedon queenslandica]
Length = 1768
Score = 518 bits (1335), Expect = e-143, Method: Compositional matrix adjust.
Identities = 313/852 (36%), Positives = 482/852 (56%), Gaps = 82/852 (9%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L LS+W LP +I YK +GIS ++ WQV+ L + GVL RN++Y A TS+GK+ VAE
Sbjct: 140 DKLLLSNWGLPQKILDCYKSKGISVMFDWQVDVLTLPGVLTGRNVLYSAPTSSGKTLVAE 199
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L L+ ++ K L+VLP+VSI EK HL+ + E +G V + G+ +
Sbjct: 200 LLSLKCILERQKKVLVVLPFVSIVHEKVNHLKSMFESVGIKVGGFMGSHAPQGGLASIDI 259
Query: 620 AVCTIEKANSLVNRMLEE--------GRLSEIGIIVIDELHMVADQNRGYLLELLLTKLR 671
AVCTIEKANSLVNR+LEE G +S++G++V+DELHMV D+ RGYLLELLLTKL
Sbjct: 260 AVCTIEKANSLVNRLLEERRDEKENNGGISQLGVVVVDELHMVGDRYRGYLLELLLTKLL 319
Query: 672 YAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPV 731
+ + + E +S + +Q++GMSA++PN+ +A WL +A Y T++RPV
Sbjct: 320 HITKKSDKNHQPIEQGNSS---INHQVSIQLIGMSASLPNLNTLAQWLDSAHYTTHYRPV 376
Query: 732 PLEEYIKVGNAIYSKKMD-VVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRK 790
PL+E +KVGN +Y + V+ T + G +D + +V +C E + GHS+LIFC ++
Sbjct: 377 PLKEMVKVGNELYDSTLSSVLSTFPRESKTGNEDEEDLVHICKERLHNGHSILIFCPTKD 436
Query: 791 GCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHH 850
CE + ++++ + + N S + S + L P GLDP+L +TLP+G+A+HH
Sbjct: 437 WCEKLSLNLAR--RHLTGNQVDSFLNKAGLISICEQLYHTPVGLDPILGKTLPAGIAFHH 494
Query: 851 AGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQM 910
AGLT++ERE++E YR L+++L TSTL++GVNLPAR VI R P + ID YRQM
Sbjct: 495 AGLTLDEREIIEGGYRSTLIKILVCTSTLSSGVNLPARLVIIRTPIFHQSLIDVQSYRQM 554
Query: 911 AGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPL------------HSCLSEDKNG 958
GRAGR GID +GES+L CK + K+ LL+ + P+ + +++
Sbjct: 555 IGRAGRKGIDEEGESILFCKSSDRAKVQLLLSSTSRPVTSCLYLSPSSSSSLHSANERDP 614
Query: 959 MTHAILEVVAGGIVQTAEDIHRYVRCTLL---------NSTKPFQDVVKSAQD-SLRWLC 1008
+ A+LEVVA G+ +I Y+ CTLL + + D ++ D SL++L
Sbjct: 615 LNRAVLEVVANGMTLGYSEILLYLSCTLLCVELVDEEKRNKEDITDEIRLILDESLKYLL 674
Query: 1009 HRKFLE---WNEDT---KLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLH 1062
+F+ N++T + Y+ T LG A SSL P E+L+V + S+AR VL ++LH
Sbjct: 675 ENEFISKTCSNKETPGSERYTATQLGMATIASSLSPREALVVFKEFSKARRLLVLENELH 734
Query: 1063 LVYLSTPINVEVE---PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISS 1119
++YL TP+++ + DW +Y + L+ + V + +GV E Y++R G P +
Sbjct: 735 MIYLVTPVSIVNQWPSIDWYKFYCIWERLATDMKHVASIIGVQEGYIVRALQGKPAERTQ 794
Query: 1120 KLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFK 1179
R+ L V +RF+ L+L LV+E+ + V +
Sbjct: 795 AQREK-------------------------LLVHQRFFTCLVLHDLVKESGLGPVSSKYG 829
Query: 1180 VARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYV 1239
++G +Q+LQ AG FA MV+VFC RLGW ++E L+ +FQ+R+ FG+ E+V+L I +
Sbjct: 830 ASKGFLQSLQSAAGTFAGMVTVFCNRLGWRNMEMLLGQFQSRLVFGIEKELVDLVRISIL 889
Query: 1240 KGSRARALYKAGLRTPLAIAEASISEIVKAL-----FES-----SSWIAEAQRRV-QLGV 1288
G+RAR LY G + +A + I L F+S + W +R + L
Sbjct: 890 NGARARILYNNGYTSLSLLARTDPTAIESVLCKAFPFKSKETTGAHWCPRERRNMSDLEA 949
Query: 1289 AKKIKNGARKIV 1300
A+ I + AR+++
Sbjct: 950 AQLIVHEARELL 961
Score = 263 bits (673), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 270/469 (57%), Gaps = 41/469 (8%)
Query: 1726 LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
LVS EL IE P+++VLA +EL GIG E C+ + L+ L+ LE KA+ +AG
Sbjct: 1315 LVSSELAHPFFTIESPILSVLAKLELNGIGFSEERCVGLKQELETLLKLLENKAFEIAGR 1374
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPST--DKHCLDLLRHEHPIVPVIKEHRT 1843
F+L +A D+ VL+ LKL + +P T +K L+ + HP+ +I E R
Sbjct: 1375 SFTLSSAEDVERVLFNELKL---------ESNPKTALNKDSLEKMSSMHPLPGLILEWRR 1425
Query: 1844 LAKLLNCTLGSICSLARISMSTQKYT------LHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
L+ L+ T +C L + S Q Y ++ H T TATGR+ + +P LQ +
Sbjct: 1426 LSSTLSRT---VCPLLKSSNRRQYYKKQLSSRIYSHS-NTHTATGRVIISDPGLQMIPK- 1480
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
+F + + + + + ++ RD F + N L+ADYSQ+ELR++AH S D L
Sbjct: 1481 -DFTIKSVALPSSSHPLSSTLVSVRDVFT-TFPNGAFLSADYSQLELRILAHLSNDHKLC 1538
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
+ ++ GD F IA W G ED++ ++R TK++ YGI+YGM +L+EQL+ + +E
Sbjct: 1539 SIFNEG-GDAFCKIAGEWFGLEEDNISDKQRQHTKQMCYGIIYGMSTKSLAEQLDVTEDE 1597
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
A++ + SFKS + G++S++ V C +KGY+++L GRKRFL I E+ A+RQA
Sbjct: 1598 AEKFMDSFKSKYTGMSSFITTTVQECREKGYIKTLFGRKRFLPLINSETLSERYHAERQA 1657
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPD------SSLAANFQMLKGRCRLLLQVHD 2131
VNS+ QG+A+D++K AMI+I ++K D S+ + N M L+LQ+HD
Sbjct: 1658 VNSMIQGTASDLVKKAMISIDH----RLHKSDFITYCTSTTSTNSNM----ALLVLQLHD 1709
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAA--LLLVPLLVKIQVGSTWGSLEP 2178
EL+ EV +V++E LVQ+ ME+ A +L V L V+++VG +WG +EP
Sbjct: 1710 ELMYEVHENVLEEVARLVQEEMEAVAFGVLSVQLPVRLKVGKSWGHMEP 1758
>gi|307199388|gb|EFN80013.1| DNA polymerase theta [Harpegnathos saltator]
Length = 1937
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 300/793 (37%), Positives = 464/793 (58%), Gaps = 71/793 (8%)
Query: 525 LYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSIC 583
++ WQ+ECL ++Q ++NLVY A TSAGK+ VAEIL+++ ++ K + +LP+VS+
Sbjct: 1 MFAWQMECLSNHKIIQEKQNLVYSAPTSAGKTLVAEILLIKTVLERQKKVIFILPFVSVV 60
Query: 584 AEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEI 643
EK + + LL G V + G T VA+ TIEKANSLVNR++EE LS +
Sbjct: 61 REKMYYFQDLLSDSGIRVEGFMGGMVPPGGFAATQVAIATIEKANSLVNRLMEENDLSSL 120
Query: 644 GIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIV 703
G +VIDELH++ D NRGYLLELLLTKL+Y + + D + +Q++
Sbjct: 121 GAVVIDELHLLGDANRGYLLELLLTKLKYM-----------------TIRNDDIN-IQLI 162
Query: 704 GMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGK 763
GMSAT+PN++ +A WL A LY+T FRP+PL EY K+G +Y K +VR + L
Sbjct: 163 GMSATLPNLSLLAKWLDAELYKTEFRPIPLNEYCKIGTHVYDNKFRLVRKLAIVPELEA- 221
Query: 764 DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDIT-- 821
D D+I++LC E + GHSVLIFC ++K CE A+ V+ K S +S F I
Sbjct: 222 DADNILQLCIETISAGHSVLIFCPTKKWCEKLAQQVAVAFFKLG----SGNSTFGGILKK 277
Query: 822 --------SAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVL 873
++ L+R P+GLD +L+ T+ G+A+HHAGLT++ER+++E +R G +RVL
Sbjct: 278 EINPELIHETLEQLKRSPSGLDNILKSTISFGIAFHHAGLTMDERDIIEGSFRTGSLRVL 337
Query: 874 TATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEE 933
ATSTL++GVNLPARRVI R P G + ++ Y+QM GRAGR G D+ GES+LICKP E
Sbjct: 338 VATSTLSSGVNLPARRVIIRSPMFGPNLLNTLTYKQMIGRAGRMGKDSAGESILICKPTE 397
Query: 934 VKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPF 993
+ LL+ P+ SCL+ D + A+LE VA ++ T+ED+ Y+ CTLL+ ++
Sbjct: 398 RNAAVSLLSAILDPIESCLN-DSTLLIRALLEAVASEVLYTSEDLELYINCTLLSLSEQ- 455
Query: 994 QDVVKSAQDSLRWLCHRKF--LEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRA 1051
+V + +++++L +F L+ E + T LG+A +S+ P E L + ++L +A
Sbjct: 456 SNVQTFSSEAIKFLLDNEFLLLQTTEKETRWIATSLGKACLAASVPPREGLFLFEELQKA 515
Query: 1052 REGFVLASDLHLVYLSTPI--NVEVEP-DWELYYERFLELSALDQSVGNQVGVSEPYLMR 1108
R FVL ++LH++YL TP+ ++E DW ++E + +S ++ VG VGV E +L+
Sbjct: 516 RRCFVLDTELHVIYLVTPLGSGSQIETVDWMTFHELWNIMSESERRVGRLVGVEERFLLS 575
Query: 1109 MAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQE 1168
G ++ ++L + KRFY AL L LV E
Sbjct: 576 AIRG------------------------------IIRPGKSLNIHKRFYSALALHELVNE 605
Query: 1169 TPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRA 1228
P+ VC+ + RG++Q LQ++A +A MV+ FC++L W +E LI++FQ R+ FGV
Sbjct: 606 VPLNIVCKKYGCCRGVLQTLQQSAATYAGMVTQFCKQLRWDCMELLISQFQTRLQFGVCR 665
Query: 1229 EIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGV 1288
E+++L +P + G RAR+LYK G+ +A A+ + +AL+ + + +E + +
Sbjct: 666 ELLDLLRLPMLNGLRARSLYKQGITCVADLAVANELNVERALYNALPFESEKDYEGEYAL 725
Query: 1289 AKKIKNGARKIVL 1301
+ +N R + +
Sbjct: 726 ETEKRNKIRTVFV 738
Score = 258 bits (660), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/460 (35%), Positives = 262/460 (56%), Gaps = 43/460 (9%)
Query: 1731 LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
L+ +IE+ + +LA MEL GIGV+++ + +++ +++ LE +AY LAG KF+L
Sbjct: 1510 LLHTFRDIEMRIATILACMELSGIGVNLKALQETLSVILSEMQSLETRAYDLAGRKFNLS 1569
Query: 1791 TAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNC 1850
++ ++ VL G K K+ ST K L+ + ++PI ++ R L N
Sbjct: 1570 SSKEVGQVL----------GLYKDKK-VSTSKAVLE--KCDNPISRLVISWRKL----NA 1612
Query: 1851 TLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGG 1910
T I +++S + +HG+ + T T TGR+SM EPNLQ V F
Sbjct: 1613 TKTKIV-YPLLNLSQEDSRIHGNCI-TCTVTGRVSMHEPNLQNVPKDFHF---------- 1660
Query: 1911 NAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
E ++ ++ R F+P+ N ++L+ADY Q+ELRL+ HFS+D L ++ K GD+F
Sbjct: 1661 --EDNNLLVSVRRSFVPALGN-VMLSADYCQLELRLLTHFSQDSVLCEIM-KQQGDIFKS 1716
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFP 2030
IAA+W E+ V ++ R +TK+L YG++YGMG +L+E L S EA+ ++SF +++P
Sbjct: 1717 IAAKWNNVIEEEVTNEMRQRTKQLCYGMIYGMGVKSLAENLCISETEAQHFLESFMNAYP 1776
Query: 2031 GVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADII 2090
G+ WL + H GYV +L GR+R L ++ + +++A+RQAVN+ QGSAADI+
Sbjct: 1777 GIYKWLDDTLEKAHHNGYVTTLLGRRRQLPDLRSTKSSTRAQAERQAVNTKVQGSAADIV 1836
Query: 2091 KIAMINIH---------SIIVGGVYKPDSSLAANFQ-MLKGRCRLLLQVHDELVLEVDPS 2140
K AMI I S+IV + L N + ML+ L+LQ+HDEL+ EV+ +
Sbjct: 1837 KKAMIIIEEKMRHSFPDSVIVFPETQGTRKLRRNSRDMLQRGGYLVLQLHDELLYEVNSA 1896
Query: 2141 VIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
+KE ++++ ME L VPL VK++VG WG L ++
Sbjct: 1897 DLKEVAIIIKESMEDVCQLTVPLPVKVRVGPAWGDLTDYK 1936
>gi|297285105|ref|XP_001111254.2| PREDICTED: DNA polymerase theta isoform 2 [Macaca mulatta]
Length = 2672
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 293/734 (39%), Positives = 430/734 (58%), Gaps = 74/734 (10%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 206 DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 265
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 266 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDI 325
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y T
Sbjct: 326 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI----TR 381
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S+S + SS ++ +QIVGMSAT+PN+ VA WL A Y T+FRPVPL E +KV
Sbjct: 382 KSASCQADLASS----LSNAVQIVGMSATLPNLELVASWLNAEHYHTDFRPVPLLESVKV 437
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DH+V LC E +++ HSVL+FC S+ CE A +
Sbjct: 438 GNSIYDSSMKLVREFEPMLQVKG-DEDHVVSLCYETIRDNHSVLLFCPSKAWCEKLADII 496
Query: 800 SKFLKKFSINVHSSDSEFI--------------DITSAIDALRRCPAGLDPVLEETLPSG 845
+ ++F H ++ E + ++ +D LRR P+GLD VL++T+ G
Sbjct: 497 A---REFYNLHHQTEGEGLVKPSECPPVNLEQKELLEVMDQLRRLPSGLDSVLQKTVSWG 553
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGT 905
VA+HHAGLT+EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 554 VAFHHAGLTLEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDIL 613
Query: 906 RYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNGMT 960
Y+QMAGRAGR G+DT G ++LICK E K + LL S P+ SCL E M
Sbjct: 614 TYKQMAGRAGRKGVDTVG-NILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTASMI 672
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHR 1010
AILE++ GG+ T++D+H Y CT L S K + ++ Q+S++ WL
Sbjct: 673 RAILEIIVGGVASTSQDMHTYAACTFLAASMKEGKQGIQRNQESVQLGAIEACVMWLLEN 732
Query: 1011 KFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY 1065
+F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH++Y
Sbjct: 733 EFIQSTEASDGTEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILY 792
Query: 1066 LSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDS 1124
L TP+ + DW ++ + +L + V VGV E +L R G K+
Sbjct: 793 LVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVTR 845
Query: 1125 TKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGM 1184
T+ H + + + KRF+ +L+L L+ E P+ E+ + + RG
Sbjct: 846 TERQH------------------RQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQ 887
Query: 1185 VQALQENAGRFASM 1198
+Q+LQ++A +A +
Sbjct: 888 IQSLQQSAAVYAGL 901
Score = 245 bits (625), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 263/531 (49%), Gaps = 81/531 (15%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY LAG
Sbjct: 2145 LLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECEGQKHIMQAKLDAIETQAYQLAG 2204
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHPSTD 1821
FS ++ DIA VL+ LKLP P G K G+Q ST
Sbjct: 2205 HSFSFTSSDDIAEVLFLELKLP-PNGEMKNQGSKKTLGSTRRGNDNGRKLRLGRQF-STS 2262
Query: 1822 KHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTAT 1881
K L+ L+ HP+ +I E R + + + + R++ ++ Q+ TAT
Sbjct: 2263 KDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-VSQSHTAT 2321
Query: 1882 GRLSMEEPNLQCVEHMVEFKMS--------NEDIYGGNAEVDHCK--------------- 1918
GR++ EPN+Q V E KM ++ I G + K
Sbjct: 2322 GRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAIGKGLLPMGRGKSKKGCSLNPGRQAQM 2381
Query: 1919 ------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
I+ R F+P ++LAADYSQ+ELR++AH S D LI +L+ D
Sbjct: 2382 EERAADRGMPFSISMRHAFVPF-PGGLILAADYSQLELRILAHLSHDRRLIQVLNT-GAD 2439
Query: 1967 VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFK 2026
VF IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A I SFK
Sbjct: 2440 VFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFK 2499
Query: 2027 SSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSA 2086
S + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQA+N+ QGSA
Sbjct: 2500 SRYTGINQFMRETVKNCKRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTTVQGSA 2559
Query: 2087 ADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQMLKGR-CR-----LLLQ 2128
ADI+KIA +NI HS G+ + D + + L+G C +LQ
Sbjct: 2560 ADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDRTGLLRKRKLQGMFCPVRGGFFILQ 2619
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L+ F
Sbjct: 2620 LHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDF 2670
>gi|391331047|ref|XP_003739962.1| PREDICTED: DNA polymerase theta-like [Metaseiulus occidentalis]
Length = 1916
Score = 511 bits (1316), Expect = e-141, Method: Compositional matrix adjust.
Identities = 310/811 (38%), Positives = 457/811 (56%), Gaps = 93/811 (11%)
Query: 504 DLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILM 562
D+S W LPS + Y+ +G+ K++ WQVECL GVL+ +NLVY A TSAGK+ V+E+LM
Sbjct: 33 DISLWGLPSAVVDNYQGKGVRKMFQWQVECLMTKGVLKGKNLVYSAPTSAGKTLVSELLM 92
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVC 622
L++++ T K A+++LP+VS+ EK + + + G V Y G+ + +AVC
Sbjct: 93 LKKVLETRKKAVMILPFVSVTREKMFYFQDMFSSGGIRVGGYMGSHLPVGGFQSVDIAVC 152
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKAN+L+N++LEE + EI +V+DELHM+ + RGYLLELLLTKL + +
Sbjct: 153 TIEKANALINKLLEEDVIDEICCVVVDELHMLGESQRGYLLELLLTKLIFYRRQN----- 207
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
EN +QI+GMSAT+PN+ +A WL AALY T+FRPVPL E +KVG
Sbjct: 208 --ENCD-----------IQIIGMSATLPNLDLIAGWLDAALYTTDFRPVPLTECLKVG-- 252
Query: 743 IYSKKMDVVRTILTAAN---------LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCE 793
+ R I T+A L D D + L V G VL+F ++ CE
Sbjct: 253 -----AESPRDITTSAEASIPLLRFPLPVDDVDGALSLIVHTVSLGFGVLVFLPTKAWCE 307
Query: 794 STARHVSKFLKKFSINVHSSDSEFID----------------ITSAIDALRRCPAGLDPV 837
+ ++ +++ +S D I ++ L++ PAGLD V
Sbjct: 308 TMSQQIARAFLAVGRPPPDPESVPPDLLELGVKLRAVNNRQAIQDVLEQLKQSPAGLDKV 367
Query: 838 LEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRI 897
E+T+P GVA+HHAGLT +ER+++E ++ G++ VLTATSTL++GVNLPARRVI R P
Sbjct: 368 FEKTVPFGVAFHHAGLTFDERDIIENAFKAGIINVLTATSTLSSGVNLPARRVIIRTPIF 427
Query: 898 GRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSED-- 955
GR +D Y+QM GRAGR GID +GES+L+CK E + L P+ SCLS
Sbjct: 428 GRQLLDVMTYKQMIGRAGRKGIDERGESILMCKENERAQATRLATMKLHPVRSCLSSRGS 487
Query: 956 -KNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQD----VVKSAQDSLRWLCHR 1010
+G+ AI+EV+A G V++ +DI Y+ CT S+K +D SA+D + +L
Sbjct: 488 VSSGLKRAIMEVIASGKVKSLKDIDTYIECTF--SSKCIEDHDDGSTSSAKDCVDYLVKN 545
Query: 1011 KFLE--WNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLST 1068
F+ +D + T LG A SSL P+++L+VL +L ++R+ FVL +DLH++Y T
Sbjct: 546 DFISVCTEDDEGRVTPTKLGLAVLASSLSPDQALLVLRELKKSRQSFVLENDLHIIYEVT 605
Query: 1069 P--INVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTK 1126
P I+ + DW E + L+ + V +G ++ + A +SK S+K
Sbjct: 606 PYFISEQAAIDWMRLMETYDALTEDRKRVAEVIGFEPAFVSKCIRAA----ASKREMSSK 661
Query: 1127 -GLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMV 1185
LH +RFYVAL L+ LVQE P+ EV E F + +G++
Sbjct: 662 VTLH------------------------QRFYVALALNELVQEVPLSEVSEKFGLQKGLL 697
Query: 1186 QALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1245
Q LQ++A FA MVS+FC+RLGW++LE LI++FQ R+ FGV+ E+ EL + + AR
Sbjct: 698 QNLQQSAATFAGMVSIFCKRLGWHNLELLISQFQKRLHFGVQQELCELLQLVPMTAQVAR 757
Query: 1246 ALYKAGLRTPLAIAEASISEIVKALFESSSW 1276
L+ AG +A A + E+ AL + ++
Sbjct: 758 ILFNAGFTNLPQVARAELHEVESALRNARAY 788
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/483 (31%), Positives = 250/483 (51%), Gaps = 31/483 (6%)
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
C + L S+L L S+E+ + E+ + VLA M+L G G D + C N L
Sbjct: 1450 CLKACVHFELMSILKSALNSKEISRDIFTKEMKICWVLAKMDLNGFGYDDKICEAQINAL 1509
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLK-----LPIPEGHNKGKQHPSTDKH 1823
+ LE + T AG F + +A D+ V+Y K L + G + K + K
Sbjct: 1510 RLLQFELETRMMTHAGRNFKISSAVDVTKVIYSLYKEKLVRLKLITGREQPKSLKLSSKS 1569
Query: 1824 CLDLLRHEHPIVP-VIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATG 1882
L L + +P +I + R +A +L + I +++ ++ T TG
Sbjct: 1570 ILLKLSEDGEELPQLIVDARKIASILARDMYPILRAKSFHSELKQHRIYTRS-TPYTMTG 1628
Query: 1883 RLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQI 1942
R+++E+PNLQ + F+ ++ DI R F+P ++L+AD+SQ+
Sbjct: 1629 RMALEDPNLQSMAR--NFRSADHDIL------------IRKAFVP-MPGAVILSADFSQL 1673
Query: 1943 ELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGM 2002
E+RL+AH S DP L + KP D+F +AA+W + V + R Q K L YGI+YG
Sbjct: 1674 EMRLLAHLSGDPLLCEMFRKPETDIFVQVAAQWRQIPANEVLDKHRQQAKELCYGIIYGK 1733
Query: 2003 GPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKI 2062
G +L+E L E + ++SF ++FPG++ + + +C + GY+ ++ GR+R+L +I
Sbjct: 1734 GVKSLAEDLGVPLAEGEAFLRSFHTAFPGISKFTSEIILNCRRTGYISTMSGRRRYLPQI 1793
Query: 2063 KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQM---- 2118
EK++A+RQAVNS QGSAAD++K +I I + + PD+S +
Sbjct: 1794 NSSKAAEKARAERQAVNSTIQGSAADLLKSCLIEIDAELSRRF--PDASRPHRAALDPRE 1851
Query: 2119 --LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
++G +++Q+HDE++LEV+ +++ LV+ ME AA L VPL+VK++ G W S+
Sbjct: 1852 IPIRG-AFMVMQLHDEVILEVNEAILSSVSQLVRFKMEHAAALQVPLVVKLKTGPHWSSV 1910
Query: 2177 EPF 2179
F
Sbjct: 1911 TAF 1913
>gi|157111398|ref|XP_001651546.1| DNA polymerase theta [Aedes aegypti]
gi|108878374|gb|EAT42599.1| AAEL005888-PA [Aedes aegypti]
Length = 1987
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 297/866 (34%), Positives = 480/866 (55%), Gaps = 110/866 (12%)
Query: 474 PTNVIKKPVGNEKSDEAGTPSSSGML-----KDCLDLSSW-LPSEICSIYKKRGISKLYP 527
P+ + KP E P S+G + K+ +S+W LP I Y ++GI++L+
Sbjct: 376 PSQIPFKPSTANTRPE---PPSNGSMSLDSSKNLRLVSNWGLPDPIAKAYARKGITELFQ 432
Query: 528 WQVECL-HVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEK 586
WQ +CL + +L+ NLVY A TS GK+ V+E L+ + ++ + A+++LP+V++ EK
Sbjct: 433 WQADCLSNAKVILECANLVYSAPTSGGKTLVSEFLVAKAVVERKRKAIVILPFVAVAREK 492
Query: 587 AEHLEVLLEPLGRHVRSYYG--NQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIG 644
+L+ +L P G V ++G N GG D VAVCTIEKANS+VNR+LE+ +L ++G
Sbjct: 493 MFYLQEILSPAGIRVEGFFGGHNPPGGFDSVD--VAVCTIEKANSIVNRLLEQRKLGDVG 550
Query: 645 IIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVG 704
++V+DE+H+++D +RGY+LELLLTK+R+A+ GE +Q+VG
Sbjct: 551 LLVVDEIHLISDSSRGYILELLLTKIRFAS------ERLGER-------------IQVVG 591
Query: 705 MSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTI-LTAANLGGK 763
MSAT+PN+ + +WL A + T++RP+ L+E +K+G ++ + ++R + +
Sbjct: 592 MSATLPNMELLVEWLGAEQFRTDYRPIELKEMVKLGTCVFDNQKKLLRKLDPDPFQEIMR 651
Query: 764 DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLK---KFSINVHSSDSEFID- 819
D D++ +LC E + EG SV++FC S+ CE A H+++F+ K N+ + I+
Sbjct: 652 DQDNVAQLCLETILEGCSVIVFCPSKDRCEQLALHLAEFIYRTLKSGGNLGERLRQEINR 711
Query: 820 --ITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATS 877
+ A+ L+ CP GLD VL +T G YHHAGLT +ER+++E+ ++ G +R++ ATS
Sbjct: 712 DKLEEALGLLKNCPTGLDAVLGKTARYGCVYHHAGLTADERDIIESSFKSGNLRIIVATS 771
Query: 878 TLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKI 937
TL++GVNLPARRVI R P G ++ YRQM GRAGR G D GES+L+C + K
Sbjct: 772 TLSSGVNLPARRVIIRTPMFGGSVMNSLTYRQMIGRAGRKGRDILGESILMCDGQSSKAA 831
Query: 938 MGLLNESCPPLHSCLSEDKNGMTH---AILEVVAGGIVQTAEDIHRYVRCTLLNSTKP-- 992
L+ P+ SCL D +G +H AILE++A G+ + D+ +V CTL + K
Sbjct: 832 WELVKTELKPIASCL--DGDGYSHLKRAILEIIASGVASSTADLESFVNCTLFSCEKKCR 889
Query: 993 FQDVVKSAQDS----------------------------LRWLCHRKFLEWNEDTK---- 1020
F + S + + +R+L +F+ + +
Sbjct: 890 FSFTIDSLEQNHRHVAWSKKRESDTNHGEGESIDPIASCVRFLLEYEFIRMQTNVESGET 949
Query: 1021 LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE---PD 1077
L +TPLG A +S+ P + ++ +L ++R+ FVL S+LH +YL TP +V +
Sbjct: 950 LLVSTPLGNACLSASMAPRDGFLLFSELQKSRQCFVLESELHAIYLVTPYSVSYQWQNIS 1009
Query: 1078 WELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLG 1137
W + ER+ + A + VG +G+ + +L+ KGL GK+
Sbjct: 1010 WVDFLERWENMDAAMRRVGELIGIRDAFLV------------------KGLRGKIGE--- 1048
Query: 1138 ITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFAS 1197
+D ++L KRFY AL L RLV E P+ V + F+ +RG++Q+LQ+ A FA
Sbjct: 1049 -------ADHESLMTHKRFYTALALKRLVDEEPLSVVAQQFQCSRGLLQSLQQVASTFAG 1101
Query: 1198 MVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
+V+ FC L W L +I +F+ R+ FGV+ ++++L I + G RAR L+ AG+ L
Sbjct: 1102 IVTAFCTSLNWNLLAMIITQFRERLFFGVQPDLLDLMRIASLNGQRARLLFNAGVTGLLE 1161
Query: 1258 IAEASISEIVKALFESSSWIAEAQRR 1283
+A + +I + L+ S+ E QR+
Sbjct: 1162 LANSDPLKIEQILYNCMSFETEQQRK 1187
Score = 194 bits (494), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 249/469 (53%), Gaps = 43/469 (9%)
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
RA + +L ++E++ + E+P+ LA MEL G D L+ +
Sbjct: 1557 RAQITQFDQLDRTQEMLPTFVQREMPIHGALARMELVGFPADANKLAHLIERLKVAQERI 1616
Query: 1776 EKKAYTL-AGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL-RHEHP 1833
++ TL G + + + +++A LK+P ++ K C +L + + P
Sbjct: 1617 SERVRTLNGGRRLNFASTSEVA----AALKVP--------RERNGRVKTCRQVLEKIDSP 1664
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ ++ +R + L+ T+ + R ++G+ T+TGR+SM EPNLQ
Sbjct: 1665 LATLVIAYRKIESNLSRTIEPLYRAIR-----DGKRIYGNSY-CFTSTGRISMHEPNLQT 1718
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
V + +FK+ +I G+ EV C R F S + ILL+AD+ Q+EL ++ H S+D
Sbjct: 1719 V--VKDFKV---EIDPGHVEVFSC----RSTFACSSPDRILLSADFCQLELCVLTHLSQD 1769
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQE-RDQTKRLIYGILYGMGPNTLSEQLN 2012
L+ +++ DVF IAA+W ++++ S E R+ TK ++YG++YGMG +++ +LN
Sbjct: 1770 RKLLAVMNGGK-DVFRGIAAKWNRIEDEALVSDELRNYTKAIVYGVIYGMGAKSMAAELN 1828
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ A ++ F S++P + + + ++GY+E+L GR+R+L I + K++S+
Sbjct: 1829 VDEDMACTLMEQFHSTYPEIRRYADKVIQVTRERGYIETLTGRRRYLPAIHSTDMKKRSE 1888
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLK-GRCRLLLQVHD 2131
A+RQAV + QGSAADI+K A++ + +L Q L+ G+ L+L +HD
Sbjct: 1889 AERQAVCTTVQGSAADILKNAILRMM-----------RNLRKYRQTLRLGQVELVLHMHD 1937
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
EL+ EV ++ +++ ME+ A L +PL VK+++G++WG ++ Q
Sbjct: 1938 ELIFEVPRDQSRKVAKILKSSMENCAKLSLPLRVKVKMGASWGEMQETQ 1986
>gi|242083350|ref|XP_002442100.1| hypothetical protein SORBIDRAFT_08g011940 [Sorghum bicolor]
gi|241942793|gb|EES15938.1| hypothetical protein SORBIDRAFT_08g011940 [Sorghum bicolor]
Length = 319
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/296 (80%), Positives = 267/296 (90%)
Query: 748 MDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFS 807
M+VVR + A+ GGKDPDHIVELC+EVV +GHSVL+FCSSRKGCESTARHV+KFLK S
Sbjct: 1 MNVVRVLPKVADHGGKDPDHIVELCNEVVLQGHSVLLFCSSRKGCESTARHVAKFLKLSS 60
Query: 808 INVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRK 867
+ SEF D +AI+ALRRCPAGLDP+L ETLP GVAYHHAGLTVEERE+VE+CYRK
Sbjct: 61 VGSSDVSSEFSDAAAAIEALRRCPAGLDPILGETLPFGVAYHHAGLTVEEREIVESCYRK 120
Query: 868 GLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESML 927
GLVRVLTATSTLAAGVNLPARRVIFRQP+IGRDFIDGTRYRQMAGRAGRTGIDTKGES+L
Sbjct: 121 GLVRVLTATSTLAAGVNLPARRVIFRQPKIGRDFIDGTRYRQMAGRAGRTGIDTKGESIL 180
Query: 928 ICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLL 987
+C+ EEVK+I G++ +CPPL SCLSEDKNGMTHAI+EVVAGGIVQTA DIHRYVRCTLL
Sbjct: 181 VCRLEEVKRITGIIRSNCPPLESCLSEDKNGMTHAIMEVVAGGIVQTANDIHRYVRCTLL 240
Query: 988 NSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLI 1043
NST+PF DVVKSAQDSLRWLCH++FL+WN +TK+YS TPLGRAAFGSSL PEESL+
Sbjct: 241 NSTRPFDDVVKSAQDSLRWLCHKRFLDWNHETKIYSATPLGRAAFGSSLNPEESLV 296
>gi|148665538|gb|EDK97954.1| polymerase (DNA directed), theta, isoform CRA_d [Mus musculus]
Length = 2398
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/710 (39%), Positives = 411/710 (57%), Gaps = 70/710 (9%)
Query: 593 LLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELH 652
L + +G V Y G+ +AVCTIE+AN LVNR++EE ++ +G++V+DELH
Sbjct: 13 LFQEVGLKVDGYMGSTSPTGQFSSLDIAVCTIERANGLVNRLIEENKMDLLGMVVVDELH 72
Query: 653 MVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNV 712
M+ D +RGYLLELLLTK+ Y + S S E++ T S + +QIVGMSAT+PN+
Sbjct: 73 MLGDSHRGYLLELLLTKICYVTRK--SASHQAESASTLS------NAVQIVGMSATLPNL 124
Query: 713 AAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELC 772
VA WL A LY T+FRPVPL E IK+GN+IY M +VR + G D DHIV LC
Sbjct: 125 QLVASWLNAELYHTDFRPVPLLESIKIGNSIYDSSMKLVREFQPLLQVKG-DEDHIVSLC 183
Query: 773 DEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSS------DSEFIDIT----- 821
E +Q+ HSVLIFC S+K CE A +++ N+H SEF +
Sbjct: 184 YETIQDNHSVLIFCPSKKWCEKVADIIAREF----YNLHHQPEGLVKSSEFPPVILDQKS 239
Query: 822 --SAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTL 879
+D L+R P+GLD VL+ T+P GVA+HHAGLT EER+++E +R+G +RVL ATSTL
Sbjct: 240 LLEVMDQLKRSPSGLDSVLKNTVPWGVAFHHAGLTFEERDIIEGAFRQGFIRVLAATSTL 299
Query: 880 AAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMG 939
++GVNLPARRVI R P +D Y+QM GRAGR G+DT GES+L+CK E K +
Sbjct: 300 SSGVNLPARRVIIRTPIFSGQPLDILTYKQMVGRAGRKGVDTMGESILVCKNSEKSKGIA 359
Query: 940 LLNESCPPLHSCLS---EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNST--KPFQ 994
LL S P+HSCL E M AILE++ GG+ T++D+ Y CT L + + Q
Sbjct: 360 LLQGSLEPVHSCLQRQGEVTASMIRAILEIIVGGVASTSQDMQTYAACTFLAAAIQEGKQ 419
Query: 995 DVVKSAQDS--------LRWLCHRKFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEES 1041
+ ++ D+ + WL +F++ E K+Y T LG A SSL P ++
Sbjct: 420 GMQRNQDDAQLGAIDACVTWLLENEFIQVAEPGDGTGGKVYHPTHLGSATLSSSLSPTDT 479
Query: 1042 LIVLDDLSRAREGFVLASDLHLVYLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVG 1100
L + DL RA +GFVL +DLH+VYL TP+ + + DW ++ + +L + V VG
Sbjct: 480 LDIFADLQRAMKGFVLENDLHIVYLVTPVFEDWISIDWYRFFCLWEKLPTSMKRVAELVG 539
Query: 1101 VSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVAL 1160
V E +L R G K+ T+ H + + + KRF+ +L
Sbjct: 540 VEEGFLARCVKG-------KVVARTERQH------------------RQMAIHKRFFTSL 574
Query: 1161 ILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQN 1220
+L L+ E P+ ++ + + RG +Q+LQ++A +A M++VF RLGW+++E L+++FQ
Sbjct: 575 VLLDLISEIPLKDINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQK 634
Query: 1221 RVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
R++FG++ E+ +L + + RAR LY +G T +A A +E+ AL
Sbjct: 635 RLTFGIQRELCDLIRVSLLNAQRARFLYASGFLTVADLARADSAEVEVAL 684
Score = 249 bits (635), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 262/543 (48%), Gaps = 100/543 (18%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 1869 LNSLLQKENLHDIFCKVEMPSQYCLALLELNGIGFSTAECESQKHVMQAKLDAIETQAYQ 1928
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHP 1818
LAG FS +A DIA VL+ LKLP P G K G+Q
Sbjct: 1929 LAGHSFSFTSADDIAQVLFLELKLP-PNGEMKTQGSKKTLGSTRRGNESGRRMRLGRQF- 1986
Query: 1819 STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCT---------LGSICSLARISMSTQKYT 1869
ST K L+ L+ HP+ +I E R ++ + L + + RI +Q +T
Sbjct: 1987 STSKDILNKLKGLHPLPGLILEWRRISNAITKVVFPLQREKHLNPLLRMERIYPVSQSHT 2046
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM----------------------SNEDI 1907
ATGR++ EPN+Q V E KM ++ +
Sbjct: 2047 ----------ATGRITFTEPNIQNVPRDFEIKMPTLVRESPPSQAPKGRFPMAIGQDKKV 2096
Query: 1908 YG---GNAEVDHCK---------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
YG G+ K ++ R F+P ++LAADYSQ+ELR++AH S+D
Sbjct: 2097 YGLHPGHRTQMEEKASDRGVPFSVSMRHAFVPF-PGGLILAADYSQLELRILAHLSRDCR 2155
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
LI +L+ DVF IAA W D+VG R K++ YGI+YGMG +L EQ+
Sbjct: 2156 LIQVLNT-GADVFRSIAAEWKMIEPDAVGDDLRQHAKQICYGIIYGMGAKSLGEQMGIKE 2214
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
N+A I SFKS + G+ ++ V +C + G+VE++ GR+R+L IK N K+ A+R
Sbjct: 2215 NDAASYIDSFKSRYKGINHFMRDTVKNCRKNGFVETILGRRRYLPGIKDDNPYHKAHAER 2274
Query: 2076 QAVNSICQGSAADIIKIAMINIHSII--VGGVYK-----------------PDSSLAANF 2116
QA+N+ QGSAADI+KIA +NI + +K P L F
Sbjct: 2275 QAINTTVQGSAADIVKIATVNIQKQLETFRSTFKSHGHRESMLQNDRTGLLPKRKLKGMF 2334
Query: 2117 QMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
++G +LQ+HDEL+ EV + + +V+ ME A L V L VK+++G++WG L
Sbjct: 2335 CPMRGGF-FILQLHDELLYEVAEEDVVQVAQIVKNEMECAIKLSVKLKVKVKIGASWGEL 2393
Query: 2177 EPF 2179
+ F
Sbjct: 2394 KDF 2396
>gi|60219516|emb|CAI56770.1| hypothetical protein [Homo sapiens]
Length = 2149
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/682 (40%), Positives = 404/682 (59%), Gaps = 72/682 (10%)
Query: 619 VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGT 678
+AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y T
Sbjct: 15 IAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI----T 70
Query: 679 SDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
S+S + SS ++ +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E +K
Sbjct: 71 RKSASCQADLASS----LSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVK 126
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
VGN+IY M +VR + G D DH+V LC E + + HSVL+FC S+K CE A
Sbjct: 127 VGNSIYDSSMKLVREFEPMLQVKG-DEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADI 185
Query: 799 VSKFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPAGLDPVLEETLPSG 845
+++ N+H + ++ +D LRR P+GLD VL++T+P G
Sbjct: 186 IAREF----YNLHHQAEGLVKPSECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWG 241
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGT 905
VA+HHAGLT EER+++E +R+GL+RVL ATSTL++GVNLPARRVI R P G +D
Sbjct: 242 VAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDIL 301
Query: 906 RYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNGMT 960
Y+QM GRAGR G+DT GES+LICK E K + LL S P+ SCL E M
Sbjct: 302 TYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTGSMI 361
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKPFQDVVKSAQDSLR---------WLCHR 1010
AILE++ GG+ T++D+H Y CT L S K + ++ Q+S++ WL
Sbjct: 362 RAILEIIVGGVASTSQDMHTYAACTFLAASMKEGKQGIQRNQESVQLGAIEACVMWLLEN 421
Query: 1011 KFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY 1065
+F++ E + K+Y T LG A SSL P ++L + DL RA +GFVL +DLH++Y
Sbjct: 422 EFIQSTEASDGTEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILY 481
Query: 1066 LSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDS 1124
L TP+ + DW ++ + +L + V VGV E +L R G K+
Sbjct: 482 LVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVAR 534
Query: 1125 TKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGM 1184
T+ H + + + KRF+ +L+L L+ E P+ E+ + + RG
Sbjct: 535 TERQH------------------RQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQ 576
Query: 1185 VQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRA 1244
+Q+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RA
Sbjct: 577 IQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRA 636
Query: 1245 RALYKAGLRTPLAIAEASISEI 1266
R LY +G T +A A+I E+
Sbjct: 637 RVLYASGFHTVADLARANIVEV 658
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 96/216 (44%), Gaps = 50/216 (23%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 1889 LNSLLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQ 1948
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIP--EGHNKGKQHP--------------------S 1819
LAG FS ++ DIA VL+ LKLP P E N+G + S
Sbjct: 1949 LAGHSFSFTSSDDIAEVLFLELKLP-PNREMKNQGSKKTLGSTRRGIDNGRKLRLGRQLS 2007
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLA-------------KLLNCTLGSICSLARISMSTQ 1866
T K L+ L+ HP+ +I E R + K LN LG + RI +Q
Sbjct: 2008 TSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKCLNPFLG----MERIYPVSQ 2063
Query: 1867 KYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM 1902
+ TATGR++ EPN+Q V E KM
Sbjct: 2064 SH----------TATGRITFTEPNIQNVPRDFEIKM 2089
>gi|89267985|emb|CAJ81454.1| polymerase (DNA directed), theta [Xenopus (Silurana) tropicalis]
Length = 861
Score = 501 bits (1291), Expect = e-138, Method: Compositional matrix adjust.
Identities = 291/711 (40%), Positives = 406/711 (57%), Gaps = 71/711 (9%)
Query: 499 LKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFV 557
L D L L+SW LP + Y G+S+++ WQ ECL + VL+ +NLVY A TSAGK+ V
Sbjct: 186 LADKLMLASWGLPKTVLEKYGSLGVSQMFEWQAECLMLGQVLEGKNLVYSAPTSAGKTLV 245
Query: 558 AEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQ--GGGSLPK 615
AE+L+L+R++ T + AL +LP+VS+ EK +L+ L + +G V Y G+ GG
Sbjct: 246 AELLILKRVLETRRKALFILPFVSVAKEKTFYLQNLFQEVGVKVDGYMGSSSPAGGFCSL 305
Query: 616 DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAG 675
D VAVCTIEKAN LVNR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+RY
Sbjct: 306 D--VAVCTIEKANGLVNRLIEENKIDLLGMMVVDELHMLGDSHRGYLLELLLTKVRYVTQ 363
Query: 676 EGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
+G G + A PA+ +QIVGMSAT+PN+ +A WL A LY T+FRPVPL E
Sbjct: 364 KGA--------VGRKAEGAGPANDVQIVGMSATLPNLGLLAAWLDAELYHTDFRPVPLLE 415
Query: 736 YIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCEST 795
+K+G +Y M VR + G D DHIV L E V GHS+LIFC S+ CE
Sbjct: 416 RVKIGRTVYDSNMVAVREFEPLLPVKGDD-DHIVSLSYETVWGGHSILIFCPSKNWCEKL 474
Query: 796 ARHVSK-FLKKFSINVHSSDSEFID------------ITSAIDALRRCPAGLDPVLEETL 842
A +++ F F D+ D I +D L+R PAGLD VL T+
Sbjct: 475 ADTIAREFYNLFHRAQQRGDAGGSDSFVPPVALDRDGIRDVMDQLKRSPAGLDAVLGRTV 534
Query: 843 PSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFI 902
P GVA+HHAGLT +ER++VE +R+G VRVL ATSTL++GVNLPARRVI R P +
Sbjct: 535 PWGVAFHHAGLTFDERDIVEGAFRQGFVRVLAATSTLSSGVNLPARRVIIRSPLFNGRLL 594
Query: 903 DGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNG---- 958
D Y+QMAGRAGR G+DT+GES+L+CK E K + LL S P+ SCL +
Sbjct: 595 DILTYKQMAGRAGRKGVDTEGESILVCKNPERAKGISLLQGSLKPVQSCLLRKEGAGVTG 654
Query: 959 -MTHAILEVVAGGIVQTAEDIHRYVRCTLLNST-------KPFQDVVKSAQDSLRWLCHR 1010
M AILE++ GG+ T ED+ Y CTLL ++ + + + + + WL
Sbjct: 655 SMIRAILEIIVGGVADTPEDVRIYASCTLLAASMKQGGGDQEEEHGGGAIEACVDWLLRN 714
Query: 1011 KFLEWNEDTK------LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
+F++ E+ + +Y T LG A SSL P E+L + DL RA +GFVL +DLH++
Sbjct: 715 EFIQILEEDRGGTKAEVYRPTKLGAATLSSSLSPSEALGIFADLQRAMKGFVLENDLHIL 774
Query: 1065 YLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRD 1123
YL TP+ E DW ++ + +L + V VG+ E +L R +G
Sbjct: 775 YLVTPVYEEWTTIDWYQFFCLWEKLPTSMKRVAELVGIEEGFLARSVNGK---------- 824
Query: 1124 STKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEV 1174
I + N Q + + +RF+ +L+L L+ E + E+
Sbjct: 825 --------------IVAKNDRQHRQ-IAIHRRFFTSLVLLDLISEVSLKEL 860
>gi|312377443|gb|EFR24272.1| hypothetical protein AND_11228 [Anopheles darlingi]
Length = 2035
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 315/856 (36%), Positives = 453/856 (52%), Gaps = 92/856 (10%)
Query: 471 SDSPTNVIKKPVGNEK---SDEAGTPSSSGML---KDCLDLSSW-LPSEICSIYKKRGIS 523
SDSP + PV + S + PS + KD LS W LP + Y K+GI
Sbjct: 391 SDSPRTRKEVPVRDTSRVASLQPQQPSPNMTFDQTKDLRLLSHWGLPESVQRQYAKKGIV 450
Query: 524 KLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSI 582
+L+PWQVECL VL + RNLVY A TSAGK+ V+E L+ + + + LL+LP+V++
Sbjct: 451 ELFPWQVECLSRKEVLLEGRNLVYSAPTSAGKTLVSEFLLAKTIAERQRKCLLILPFVAV 510
Query: 583 CAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSE 642
EK +L+ LL P G V +YG + +AVCTIEKANS++NR+LE+ L+
Sbjct: 511 AREKTHYLQQLLGPGGWRVEGFYGGSHPPGGFESVDLAVCTIEKANSIINRLLEQSNLTT 570
Query: 643 IGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQI 702
+G++V+DE+H++AD +RGY+LELLLTK+R+ A + + +QI
Sbjct: 571 LGLVVVDEVHLIADPSRGYILELLLTKVRFVAQQANAT-------------------IQI 611
Query: 703 VGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTI----LTAA 758
V MSAT+PNV +A WL A Y T++RP+ L E +K+GN +Y + L
Sbjct: 612 VCMSATLPNVELLARWLDADHYHTDYRPIELIEMMKIGNTVYGAAGAADQVAAIRRLDGT 671
Query: 759 NLG---GKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFL----KKFSINVH 811
LG KDP+H+ +L E + EG SV++FC S+ CE + ++ L K+ + H
Sbjct: 672 LLGCPITKDPEHVTQLTLETLLEGCSVIVFCPSKDWCEQLSLTLASTLHTLKKEDPASTH 731
Query: 812 SSDSEFID-------ITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETC 864
+ E ++ + LR CPAGLD VL +T+ G+A+HHAGLT +ER++VE
Sbjct: 732 QALRERLNEQLDGTKQEEVLLQLRNCPAGLDAVLGKTIRYGIAFHHAGLTTDERDIVEGS 791
Query: 865 YRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGE 924
+R G +RV+ ATSTL++GVNLPARRVI R P+ G I+ YRQM GRAGR G DT GE
Sbjct: 792 FRDGALRVIVATSTLSSGVNLPARRVIVRTPKFGGRPINALTYRQMIGRAGRKGRDTLGE 851
Query: 925 SMLICKPEEVKKIMGLLNES-CPPLHSCLSEDKNGMTHAIL-------EVVAGGIVQTAE 976
S+LIC P E K LL + PPL SCL D +A L G +
Sbjct: 852 SVLICTPAEEKIGRELLGANELPPLRSCLDADNYDFVNATLYSCDRSYRFSVGEQLLATV 911
Query: 977 DIHRYVRCTLLNSTKPFQDVVKSAQDS-----LRWLCHRKF--LEWNEDTKLYSTTPLGR 1029
+ T + K+ +D L +L +F L+ E+ + + T LG
Sbjct: 912 TTTKTTTTTTTGKETKNESTHKATRDDPVVSCLAFLLEYEFIRLQETEERTVLAATRLGH 971
Query: 1030 AAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEV---EPDWELYYERFL 1086
A +SL P++ ++ +L RAR+ FVL S+LH VYL TP +V + W + + +
Sbjct: 972 ACLAASLPPKDGFLLFSELQRARQCFVLESELHAVYLVTPYSVAYQWQQIGWMDFLDLWE 1031
Query: 1087 ELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSD 1146
L A + VG VGV E +++R G G L D
Sbjct: 1032 RLPASARRVGELVGVRESFMVRAMRGT----------------GVL-------------D 1062
Query: 1147 AQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL 1206
+ L++ KRFY AL L LV E P+ V + F+ RG++Q+LQ+ A FA +V+ FC L
Sbjct: 1063 QRALQIHKRFYTALALLDLVNEVPLCTVAKRFRCCRGLLQSLQQTAATFAGIVASFCASL 1122
Query: 1207 GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEI 1266
W L ++ +F+ R+ FGV E+++L I + G RAR LY AG + L +A A I
Sbjct: 1123 NWTLLHLIVVQFRERLFFGVAHELLDLMRIASLNGQRARLLYDAGFQGLLQLANADRHAI 1182
Query: 1267 VKALFESSSWIAEAQR 1282
L +S+ E R
Sbjct: 1183 ETVLHNCASFETERLR 1198
Score = 151 bits (382), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 193/383 (50%), Gaps = 42/383 (10%)
Query: 1815 KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHW 1874
++ P T + L+ R ++P+ ++ +R + L T+ + ++S ++ +HG
Sbjct: 1669 RERPRTVRQVLE--RLDNPLAALVIAYRKIDSNLARTIEPLYRTIQLSAESR---VHGRS 1723
Query: 1875 LQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV----DHCKINARDFFIPSQE 1930
T+TGR++M EPNLQ V + +F + + GG E + + R F +
Sbjct: 1724 -HCFTSTGRITMHEPNLQTV--VKDFTVP-APLAGGMRERRTTDEEEHFSCRSTFACNDT 1779
Query: 1931 NWILLAADYSQIELRLMAHFSKDPALIGLLS------------KPHGDVFTMIAARWTGR 1978
+LL+AD+ Q+EL ++ H S+D L+ L KP DVF +AARW
Sbjct: 1780 TRVLLSADFCQLELCILTHLSQDRRLLAALDGSAVADGAGSRRKPQ-DVFRSLAARWHQL 1838
Query: 1979 SEDSVGSQE-RDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
+ S S E R +TK ++YG++YGMG ++ +L A+ ++ F S+P + +
Sbjct: 1839 GDASEVSDELRTRTKAIVYGVIYGMGARAMAAELQMEEESARSLMEQFHRSYPDIRRYQE 1898
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSIC---QGSAADIIKIAM 2094
+ Q GY+E+L GR+R+L I + + ++C QGSAADI+K A+
Sbjct: 1899 RVIRLTRQLGYIETLTGRRRYLPAIGQAATADPAARAEAERQAVCTTIQGSAADILKNAI 1958
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLK-GRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCM 2153
+ + + +L +L G +L+L +HDELV E+ + + + +++ M
Sbjct: 1959 VRM-----------ERNLRKYADVLDVGAIQLVLHLHDELVYELPRAQLPKVAKILRSSM 2007
Query: 2154 ESAALLLVPLLVKIQVGSTWGSL 2176
E+ A L VPL VK++ G +WG++
Sbjct: 2008 ENCAKLSVPLRVKLKAGDSWGTM 2030
>gi|159486913|ref|XP_001701481.1| DNA polymerase theta [Chlamydomonas reinhardtii]
gi|158271663|gb|EDO97478.1| DNA polymerase theta [Chlamydomonas reinhardtii]
Length = 2508
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 274/620 (44%), Positives = 362/620 (58%), Gaps = 70/620 (11%)
Query: 505 LSSWLPSEICSIYKKRGISK--LYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILM 562
L ++LP +C Y R + LY WQ ECL GVL RNLVYCA TS GKS VAE+L
Sbjct: 841 LEAYLPEPLCQAYYDRSGRQFDLYEWQAECLCQMGVLMGRNLVYCAPTSGGKSMVAEMLG 900
Query: 563 LRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKD-TSVAV 621
+RRL++TGK +LVLP+V++CAEKA+ L+ LL P+ R V S YG Q G + + V
Sbjct: 901 IRRLLTTGKPFMLVLPFVALCAEKADALQALLAPINRTVNSAYGGQTSGKIIQPGVGAIV 960
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS 681
TIEKAN LVN MLEE L E+ +++DELHMV
Sbjct: 961 ATIEKANMLVNAMLEEETLGELSAVIVDELHMV--------------------------- 993
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN 741
+GMSATMPNV VA WL AALY T+FRPV L+EY+KVG
Sbjct: 994 ---------------------IGMSATMPNVDVVARWLDAALYITDFRPVQLQEYVKVGR 1032
Query: 742 AIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSK 801
I +VR + KD DH+ L E V+EGHSVLIFC+S+ CE A HV++
Sbjct: 1033 RIMDGSGALVRELAPDKGWEDKDTDHVALLTQETVREGHSVLIFCASKFWCEKVAEHVAR 1092
Query: 802 FL----KKFSINVHSSDSEFID--ITSA---------IDALRRCPAGLDPVLEETLPSGV 846
+ + N ++ + D ++ A + LRR +G DP L + + GV
Sbjct: 1093 LVAIAQRDPPPNAAAAAGKDPDGGVSPAAARNARDTYVQELRRL-SGGDPTLPDLVARGV 1151
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGR--DFIDG 904
AYHHAGL+ EER+++E Y+ G + VLTATSTLAAGVNLPARRVIFR IG+ + ID
Sbjct: 1152 AYHHAGLSNEERDLIEAAYKAGAISVLTATSTLAAGVNLPARRVIFRHTYIGKQDNPIDA 1211
Query: 905 TRYRQMAGRAGRTGIDTKGESMLIC-KPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAI 963
T+YRQM+GRAGR GIDT GES +IC K V ++ L+ + P+ SCL+E + GM A+
Sbjct: 1212 TKYRQMSGRAGRAGIDTAGESFIICEKNRPVAPLLALMQQKANPIASCLTEARKGMKRAV 1271
Query: 964 LEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYS 1023
LEVVA G V + D+ R++ CTL+++ F V K+ +L WL F+ +E T +
Sbjct: 1272 LEVVASGAVSSGTDVKRFIACTLIHAQHGFGAVAKATIAALHWLKDNGFIRVDEATLNWG 1331
Query: 1024 TTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYE 1083
TP G+A SS+ PEE+L+V DL RAR VLA+DLH+ YL TPI ++ DWE+Y+
Sbjct: 1332 PTPFGKATLASSMPPEEALVVRADLERARMSLVLATDLHVTYLVTPIKEDLRVDWEIYFH 1391
Query: 1084 RFLELSALDQSVGNQVGVSE 1103
F +LS +D V V + E
Sbjct: 1392 WFEKLSKVDARVAELVPLKE 1411
Score = 295 bits (756), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 268/545 (49%), Gaps = 86/545 (15%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
CRR A R + L SE L+ LL +E+PLV +LA ME GI + + R
Sbjct: 1969 ACRRAAMVRRIYIDKLPRLQSEGLLRPLLELEMPLVRILARMEGEGIALAPQVLKDQRGP 2028
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG--HNKGKQHPSTDKHCL 1825
L+ +LR L KA+ AGM F L + D++ VL+ HL LP P N+ ++HPST K L
Sbjct: 2029 LEARLRQLAAKAHLAAGMTFDLNSPKDVSEVLFQHLNLPPPPCAFSNQNQRHPSTKKEVL 2088
Query: 1826 DLLRH--EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLH------------ 1871
+ L HPI+ ++ ++RTL KLL + ++ A+ Q++ L
Sbjct: 2089 EELEESTHHPIIRLLLDYRTLHKLLTGFVETLYHTAKGQWQRQQHELERCQGQGQQPQRG 2148
Query: 1872 -----------------------GHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIY 1908
G WL TSTATGRL+M+EPNLQ V VE+ +
Sbjct: 2149 GAATGGAVKPGGPGPVPDVIRLCGTWLHTSTATGRLAMDEPNLQTVPRPVEYTFMASQLS 2208
Query: 1909 GGNAEVDHCK-----------------------------INARDFFIPSQENWILLAADY 1939
+A N R F+ + +++LAADY
Sbjct: 2209 QASAGTPPAAGADGAELKLLPGEERGGGAGEGGRSVTLHFNLRSAFV-APPGYMVLAADY 2267
Query: 1940 SQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGIL 1999
QIELRLMAHFS D AL LL P D F ++AA W + V + R Q KRL YG+L
Sbjct: 2268 KQIELRLMAHFSSDAALCALLRNPAQDPFILLAAEWKKVPVEQVTPEVRVQAKRLAYGML 2327
Query: 2000 YGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFL 2059
YGMG NTL+++L S EA E +F+ + P V W+ V + GY +L GR+R+
Sbjct: 2328 YGMGTNTLAQELGVSVAEAGELSDNFRRAIPSVDRWMREVVEAVRSCGYTTTLMGRRRYY 2387
Query: 2060 SKIKFGNNKE----KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAAN 2115
S+I +K+ +++A+RQAVN++CQGSAAD+IK AM+ + +
Sbjct: 2388 SRINERASKDARSARAQAERQAVNTVCQGSAADLIKAAMVTLQRRL-------------E 2434
Query: 2116 FQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGS 2175
+ L R++L VHDELV EV ++ A LVQ +E L VPL VK+ G +WG
Sbjct: 2435 AEGLAPHVRMVLMVHDELVFEVAEQLLPAAARLVQAVLEGEVALSVPLPVKLSAGPSWGQ 2494
Query: 2176 LEPFQ 2180
L ++
Sbjct: 2495 LRDYE 2499
Score = 130 bits (327), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 96/150 (64%), Gaps = 6/150 (4%)
Query: 1163 SRLVQETPVLEVCETFKVAR--GMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQN 1220
+R+ + P+ EV E + + + G ++ LQE AGRF++MV+ FCERLGW D+E +IAKFQ+
Sbjct: 1401 ARVAELVPLKEVAEKYGLGKEKGPLEGLQERAGRFSAMVAAFCERLGWSDMEVIIAKFQS 1460
Query: 1221 RVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSW---- 1276
RV +GVR E+V LT IPYVKG RAR L+KAGLR P A+A +++ L
Sbjct: 1461 RVWYGVRPEVVALTEIPYVKGHRARLLFKAGLRMPEAVAACEFDRLLEILSAGGGAKNPE 1520
Query: 1277 IAEAQRRVQLGVAKKIKNGARKIVLEKAEE 1306
E QR+ + A+ I GA+ +V +K +E
Sbjct: 1521 QEEQQRKTERRAARMILQGAKDLVNQKVQE 1550
>gi|296416253|ref|XP_002837795.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633678|emb|CAZ81986.1| unnamed protein product [Tuber melanosporum]
Length = 937
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 296/813 (36%), Positives = 440/813 (54%), Gaps = 91/813 (11%)
Query: 493 PSSSGMLKDC-----LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLV 545
PS+S +D L + W L E+ + GI ++YPWQ ECL + G+L NLV
Sbjct: 134 PSTSLTYRDTENEYSLAHAKWGLRREVVMGFSHCGIGQMYPWQAECLAMSGLLAGESNLV 193
Query: 546 YCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPL-------G 598
Y A TSAGKS VA+IL +R++++ + A++VLP+++I EK L+ +LE + G
Sbjct: 194 YTAPTSAGKSLVADILAIRKVVNERRKAIIVLPFIAIVQEKTRFLKKVLEKVRVAVPKRG 253
Query: 599 R----------HVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVI 648
R ++ ++G K+ VAVCTIEKAN+LVN +E+ ++++GI+V
Sbjct: 254 RWDKANLWKHLNIIGFHGGSKARMGWKELDVAVCTIEKANALVNAAIEDRTVNQLGIVVF 313
Query: 649 DELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSAT 708
DELHM+ D +RGY+LELL TKL +QIVGMSAT
Sbjct: 314 DELHMLGDDHRGYILELLATKLLCLT----------------------EANIQIVGMSAT 351
Query: 709 MPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDP--D 766
+ NV +A WL+A YE FRP+PL+E++ N IYS +V I + KDP +
Sbjct: 352 LSNVRVLATWLKAQFYECAFRPIPLQEHLVYDNNIYSYDEKLVAKISPSEPKELKDPVTN 411
Query: 767 HIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDA 826
IV L E V+ GH VL+FC SR CE R + KF+ ++N + I
Sbjct: 412 AIVSLTHEAVKGGHGVLVFCESRSRCEDVGRLLVKFMP--AVNEEIREERMEIIRD---- 465
Query: 827 LRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLP 886
L GLDP+LE+T+P+GVA+HHAGLT EER+++ Y +G ++V+ T+T+AAGVNLP
Sbjct: 466 LATTSTGLDPILEKTVPAGVAFHHAGLTTEERDLIAEAYDRGAIKVICCTATMAAGVNLP 525
Query: 887 ARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCP 946
ARRVI PR+GRDF+ T +QM GRAGR G DT GE+ L C+ E++ + L+N P
Sbjct: 526 ARRVII-SPRMGRDFLSPTMLKQMRGRAGRKGRDTHGENYLCCRKEDLGPVKELINAPMP 584
Query: 947 PLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNST--KPFQDVVKSAQDSL 1004
+ SCL + + A+LE +A + + + + Y+R TL+ T +P + + D++
Sbjct: 585 SIQSCLGGETGSLKRALLEGIATKLATSDDSLSEYMRATLIYHTTPEPLKYLKPKILDAI 644
Query: 1005 RWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
L + + + T +G A S L PEE + + D+LSRA F L SD+H+V
Sbjct: 645 EHLKQMGLISEDRIQGYFHATGVGNATVASGLSPEEGVFLHDELSRALMNFNLESDMHIV 704
Query: 1065 YLSTPIN----VEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAHGAPMRI 1117
Y TPI+ V DW+L E E+ LD+S VGVS ++ +MA G +R
Sbjct: 705 YQFTPIHSSTTASVNIDWKLMRE---EVEKLDESGIRAATFVGVSPAFVNKMAQGGTLR- 760
Query: 1118 SSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCET 1177
DS + + RV +RFYV+L+L L+ E PV V
Sbjct: 761 ----EDSPQNI-------------------SKARVYRRFYVSLMLRELLNEKPVHIVAAN 797
Query: 1178 FKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIP 1237
+ +ARG +Q L FA++ FC +GW L L+ + R+ GV+A+++ L IP
Sbjct: 798 YNIARGFIQQLSTTCKGFATISGTFCRVMGWTGLAVLLEHYSWRLDMGVKADLMSLARIP 857
Query: 1238 YVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
+VK AR ++ GL++ A++ +++ +VK L
Sbjct: 858 FVKSVTARIFHENGLKSVEAVSASNVEALVKLL 890
>gi|440291188|gb|ELP84457.1| DNA polymerase theta, putative [Entamoeba invadens IP1]
Length = 1134
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 293/832 (35%), Positives = 462/832 (55%), Gaps = 93/832 (11%)
Query: 513 ICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLISTGK 571
I + YK +GI KL+PWQVECL VL +RN VY A TSAGK+ V+E+LM+ R T +
Sbjct: 130 IANFYKSKGILKLFPWQVECLEKSEVLAGKRNFVYSAPTSAGKTLVSEMLMVHRYCQTQR 189
Query: 572 MALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLV 631
+ ++PYVS+ EKA++ L V ++ ++ + + +AVCTIEKAN+LV
Sbjct: 190 KTIYIVPYVSLGNEKAKYFAELFASTRNVVCGFFQSR---PIHTNFDIAVCTIEKANALV 246
Query: 632 NRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSS 691
N+M+++ ++G+IV+DE+HM+AD++RGY+LE LL+K+ Y G
Sbjct: 247 NKMIQDKTFQKVGMIVVDEIHMLADKSRGYILETLLSKVMYVGGH--------------- 291
Query: 692 GKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVV 751
+Q++GMSAT+P++ + WL+A Y +RPV L E + N + SK +V+
Sbjct: 292 --------IQVIGMSATVPDIHVIGMWLKAETYVCTYRPVELTENVVCENKVLSKSGEVL 343
Query: 752 RTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKK-----F 806
+T+ GG + + IVEL EV + G VL FCSS+ GCE + + LKK F
Sbjct: 344 KTLC-----GGGEVNQIVELILEVSEGGKGVLCFCSSKYGCEKMGKDIVANLKKRKKGGF 398
Query: 807 SINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYR 866
+N D E + ++ LR G D L + + G+AYHH+G+T EERE++E +R
Sbjct: 399 GLN---EDIETLR-ELMVEELRTNVNGSDEELLKCVRCGLAYHHSGITQEEREILEKGFR 454
Query: 867 KGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESM 926
+G++ ++ ATSTLA GVNLPA RVIF +P IG DF+D RYRQM GRAGR G DTKGES
Sbjct: 455 EGVLSLIIATSTLAVGVNLPASRVIFNRPYIGIDFLDVGRYRQMCGRAGRLGFDTKGESY 514
Query: 927 LICKPEEVKKIMGLLNESCPPLHSCLSEDKNG-MTHAILEVVAGGIVQTAEDIHRYVRCT 985
L K E KK++ ++N PPL + E++ M+ +ILE V ++ T D+ +Y RC+
Sbjct: 515 LFVKVNEKKKVLEMVNAVLPPLQESVMENETSKMSQSILEGVEDKMIATEIDMEKYCRCS 574
Query: 986 LLN-STKPFQDVVKSAQ-------DSLRWLCHRKFLEWNEDT---KLYSTTPLGRAAFGS 1034
+ S P + V+ Q ++++ L +E + + K+Y TT G+A S
Sbjct: 575 IYTVSDNP--ETVEYTQHNREIINNAIQILMGSLMVEESMNACGEKVYVTTQFGKATVNS 632
Query: 1035 SLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQS 1094
+ +++L V DL+ A++ S+L ++YL + IN E DW+++ ++ EL+ D+
Sbjct: 633 GIGMDDALRVYSDLNEAKKKIHADSELQVLYLVSAINTSSEVDWDVFERKYEELNETDRE 692
Query: 1095 VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCK 1154
+ N++ + ++ M + KLR
Sbjct: 693 IFNELKIDVMFVREMQSKKKTKEDVKLRKHQMA--------------------------- 725
Query: 1155 RFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGL 1214
Y AL+L+ L++E + EV + + +ARG +QALQ N A++++ FC +LGW + +
Sbjct: 726 --YCALVLNDLIKERDISEVTKEYNIARGHLQALQTNTAASANIIAQFCVQLGWDMMYAV 783
Query: 1215 IAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL---- 1270
A +R+++GVR E+V+LT I VKG RAR LYK GLR+ +A+A++ + L
Sbjct: 784 FAAIVDRLNYGVRRELVDLTRIEGVKGRRARELYKWGLRSVDDVADATVDRVTDILQRMR 843
Query: 1271 --FESSSWIAEAQ-RRVQLGVAKKIKNGARKIV--LEKAEEARIAAFSAFKS 1317
E + ++ ++V GVA+KI AR++ L AE+ +A S ++
Sbjct: 844 RPVEKNGYVGGVMGQKVDAGVARKIIRNARELTGKLSAAEKVAVAIQSGVRN 895
>gi|145350926|ref|XP_001419844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580076|gb|ABO98137.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 874
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 294/799 (36%), Positives = 437/799 (54%), Gaps = 77/799 (9%)
Query: 483 GNEKSDEAGTPSSSGMLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQR 541
GNE S P ++ +D L W +P +G+ +LYPWQ+ECL + GV++
Sbjct: 120 GNEASTSIERPVTATGRRD---LEFWGVPESAREALAAKGVRELYPWQMECLSLPGVMEG 176
Query: 542 R-NLVYCASTSAGKSFVAEILMLRRLIST-GKMALLVLPYVSICAEKAEHLEVLLEPLGR 599
R NL+Y A TS GKS VA++L++RR G +A+ VLP+V++C E+A+ LE L
Sbjct: 177 RVNLLYSAPTSGGKSLVADLLLMRRFRERPGSVAMFVLPFVALCEERADSLENLFAGTEF 236
Query: 600 HVRSYYGNQGGGSLPKDT---SVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVAD 656
+R YG +GG + P D+ ++ V T E+AN + +R+LEE RL E+ +++DELH++ D
Sbjct: 237 RLRRMYGGRGG-AFPSDSKMNTLLVLTPERANQVTSRLLEENRLHELSAVIVDELHLIQD 295
Query: 657 QNRGYLLELLLTKLRYAAGE---GTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVA 713
+RG +EL LTKL YA G GT D S +QI+GMSA++PN+
Sbjct: 296 DDRGATMELFLTKLVYAIGNTRGGTRDQRS----------------MQIIGMSASIPNLK 339
Query: 714 AVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMD-VVRTILTAANLGGKDPDHIVELC 772
A+ADWL A LY TNFRP+ LE +KVG I+ V+RT+L + D HI EL
Sbjct: 340 ALADWLFARLYVTNFRPIRLEVCVKVGCEIFHPATKHVIRTMLNKSP--NSDNAHIAELA 397
Query: 773 DEVVQEGHSVLIFCSSRKGCESTARHVSKFLK-KFSINVHSSDSEFIDITSAIDALRRCP 831
E + E SVL+FCS+R C++ A + ++ +H++ +I +
Sbjct: 398 QETIDEDGSVLVFCSTRAACKTLADQLRNMMQCTVPRQIHNATLSRDEIVVGYETALGAK 457
Query: 832 AGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVI 891
+ + P +++ GVA+HHAGL+ EE E V Y++G++RVL TSTLA GVNLPARRVI
Sbjct: 458 SDVLPYIKD----GVAFHHAGLSREENEAVADAYKRGVIRVLCCTSTLATGVNLPARRVI 513
Query: 892 FRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLIC-KPEEVKKIMGLLNESCPPLHS 950
R +G ++ +QM GRAGR G+DT G +++ C K E+ + L++ L S
Sbjct: 514 LRDTNMGWKKLNARDIQQMTGRAGRAGLDTSGSAIIFCPKLAELDNVCALVDGPSDELTS 573
Query: 951 CLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVK-SAQDSLRWLCH 1009
++E GM +LE VA G+V+ D+ YV+CTLL++ F + V+ +A D+LRW
Sbjct: 574 AVAE--VGMRRIMLEAVAAGLVKIPTDVQDYVKCTLLSALNDFDESVRQTAIDALRWCQK 631
Query: 1010 RKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLST- 1068
L WN L+S + LG A G + ++ ++ D+ ARE VL++ LHL+YL T
Sbjct: 632 NALLVWNVTAYLWSASALGNAVAGGMMPLDQVQPIIRDVKTAREDLVLSTPLHLLYLLTA 691
Query: 1069 ---------PINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISS 1119
P+N+ + + L+A + +VG+ E Y+ R+ S
Sbjct: 692 PPVLDDEGAPVNLNKFRTLDALAVLWSNLNAEQLRIAEKVGIDERYVQRL--------RS 743
Query: 1120 KLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFK 1179
RD T H + C+RF+VAL L+ L+QE P+ + +
Sbjct: 744 NKRDITIA-HQLQRF-----------------ACQRFHVALFLTDLIQEVPIESITSKYG 785
Query: 1180 VARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYV 1239
V V Q++ RFAS V+ C LGW D+EGLI + +R++ G + EI+ELT IPY+
Sbjct: 786 VRAFDVLEEQKSCARFASYVAAICGTLGWGDMEGLITRISDRITAGAQEEILELTKIPYI 845
Query: 1240 KGSRARALYKAGLRTPLAI 1258
RARALY G+ TP AI
Sbjct: 846 GIHRARALYTGGITTPKAI 864
>gi|134054980|emb|CAK36988.1| unnamed protein product [Aspergillus niger]
Length = 913
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 274/792 (34%), Positives = 417/792 (52%), Gaps = 80/792 (10%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + + G+S +Y WQ CL G+L+ R+LVY A T GKS VA++LML+R+I
Sbjct: 123 LPPGLVANFAAAGLSSIYQWQASCLLAPGLLKGDRHLVYTAPTGGGKSLVADVLMLKRII 182
Query: 568 -STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEK 626
+ G+ A+LVLPYV++ EK + L +++ V YYG + DT +AVCTIEK
Sbjct: 183 ENPGRKAILVLPYVALVQEKLKWLRRIVQDRSIRVTGYYGGSRTAASWADTDIAVCTIEK 242
Query: 627 ANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGEN 686
ANSL+N +EE + ++G++V+DELHM+ D++RGYLLEL++TKL
Sbjct: 243 ANSLINSAIEECSIGDLGVVVLDELHMLDDEHRGYLLELMVTKLLLL------------- 289
Query: 687 SGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS- 745
QI+GMSAT+ N +A+W+ AA + + +RP+P+++Y+ NAIY
Sbjct: 290 ----------RQRTQIIGMSATLSNTEMLAEWMNAAYFVSTYRPIPIDDYLVYENAIYPA 339
Query: 746 -------KKMDVVRTILTAANLGGKDPDHI-----------------VELCDEVVQEGHS 781
+ + ++++ A + PD + V L + GH
Sbjct: 340 ATSRQLFQTISKLKSMSNATLMERMPPDRVIRPSTFRELANPMTNATVALAIDTAGAGHG 399
Query: 782 VLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEET 841
L+FC SR C+ A +S+ + + N E + LR P+GLDPVLE+T
Sbjct: 400 ALVFCGSRHMCQIQAVVMSEAMPAPADNT----DELTKRLDLLAELRSLPSGLDPVLEKT 455
Query: 842 LPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDF 901
L GV +HHAG+T EERE++ Y +G++R L AT +LAAGVNLPARRVI R+GR+
Sbjct: 456 LVRGVGFHHAGMTAEERELIAQAYDQGVLRTLIATCSLAAGVNLPARRVIINGARMGREL 515
Query: 902 IDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTH 961
+ RQM GRAGR G D GE+ LIC +++ + LL P + SCL+ +K G+
Sbjct: 516 VGPAMLRQMCGRAGRKGKDDAGETYLICGDSDLQAVCDLLEAEMPAIESCLAPEKRGLKR 575
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKL 1021
A+LE +A G+V + I YVRCTLL T + +L+ L ++ N+D
Sbjct: 576 ALLEAIATGLVSGNDAIKEYVRCTLLYLTVDKKVAYAIMGSALQELATEGLVQLNDDES- 634
Query: 1022 YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEP--DWE 1079
YS+T LG+A S+ PE+ L V ++L RA + FV+ D+H+ YL TP+ DW
Sbjct: 635 YSSTQLGQAVVASAFAPEDGLFVFEELKRALQAFVMDGDMHIFYLFTPLQAATATPIDWL 694
Query: 1080 LYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGIT 1139
++ ++ L VGVS ++ MA + L+++T
Sbjct: 695 IFRDQLDNLDESGLRALQFVGVSPGFVNTMAQSG-----ASLKENTP------------- 736
Query: 1140 SNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMV 1199
R+ +R Y A L L E P+ V +++ RG VQ L + FA+ +
Sbjct: 737 -----EQMNQARIYRRAYTAFQLRDLSNEMPLSAVANRYRIPRGAVQTLAQQCHGFAAGI 791
Query: 1200 SVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIA 1259
FC+R+ W L ++ ++R+ G RA+++E+ + YVKG AR L + G R A+A
Sbjct: 792 VKFCQRMNWGMLAAVLDHMRDRLEAGARADLLEMAQVTYVKGWTARLLRENGFRNLRALA 851
Query: 1260 EASISEIVKALF 1271
EA ++V L
Sbjct: 852 EADAKDLVPILM 863
>gi|428169897|gb|EKX38827.1| hypothetical protein GUITHDRAFT_115154 [Guillardia theta CCMP2712]
Length = 910
Score = 468 bits (1204), Expect = e-128, Method: Compositional matrix adjust.
Identities = 310/861 (36%), Positives = 455/861 (52%), Gaps = 98/861 (11%)
Query: 483 GNEKSDEAGTPSSSGMLKDCLDLSSW-----LPSEICSIYKKRGISKLYPWQVECLHVDG 537
G E++D+ S+ + L LS W L E+ S++ KRGIS L+ WQV+C++ G
Sbjct: 101 GKEQTDQKSCNRSAAI---TLSLSDWSQRWGLGDEVSSVFLKRGISSLFEWQVDCINSSG 157
Query: 538 VLQRRNLVYCASTSAGKSFVAEILMLRRLI-----STGKM-ALLVLPYVSICAEKAEHLE 591
+LQ NLV A TSAGK+ V++IL+LR L+ TG+ ALLVLPYVS+ EK L+
Sbjct: 158 ILQGGNLVLSAPTSAGKTLVSDILILRNLVRAMQRETGRAKALLVLPYVSLAQEKTLSLK 217
Query: 592 VLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDEL 651
PL V +Y +GG + +AVCTIEKANSLVNR++E
Sbjct: 218 HTASPLNIKVTGFYAGKGGPFAGTEAEIAVCTIEKANSLVNRLIE--------------- 262
Query: 652 HMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPN 711
E+ S + A ++++ MSAT+ N
Sbjct: 263 ---------------------------------ESRQASLQWSFRAPDVKVLCMSATISN 289
Query: 712 VAAVADWLQAALYETNFRPVPLEEYIKV-GNAIYSKKM--DVVRTI-------LTAANLG 761
+A WL A++Y+T FRP+ L EYI V GN + +K + D +I G
Sbjct: 290 PEDLASWLNASVYKTEFRPIELAEYIFVNGNVLPAKLLRDDKCNSIPFSLAQRRVGPTFG 349
Query: 762 GKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFL--KKFSINVHSSDSEFID 819
KDPD + L E ++ S LIFCSS+ ES A+ ++ K+ N E ++
Sbjct: 350 LKDPDLVGALAYEAIRTSQSTLIFCSSKSATESCAKFLAGLFAPKEDKRNPVRVSDELVE 409
Query: 820 ITSAI-DALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATST 878
+AI + L RC GLDP L+ T+P G A+HHAGLT+EER ++E +R G + VL ATST
Sbjct: 410 KRAAILEELARCEGGLDPSLKATIPHGAAFHHAGLTLEERTILENGFRAGTIPVLAATST 469
Query: 879 LAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIM 938
LAAGVNLPA RVI R P +G + +D RY+QM+GRAGRTG++T GES L+ K +
Sbjct: 470 LAAGVNLPASRVILRSPNVGMETLDPMRYKQMSGRAGRTGLETMGESYLMIKSSQWALAK 529
Query: 939 GLLNESCPPLHSCLSEDKNG-MTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVV 997
++ P L SCL +G + ILE V G+ + + + +++ TLL +D+
Sbjct: 530 SVMLAPMPQLTSCLLSSGHGILRRMILEAVVHGLALSLDSLKNFMKKTLLFVQD--KDIF 587
Query: 998 KSAQDSLRWLCHRKFL-----------EWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLD 1046
K + SL WL + FL E ++ T LG+A S L PE+ L V
Sbjct: 588 KHLRGSLEWLERKDFLRIKRPEVFSDSEEKCESVFVEATALGQATVSSGLAPEQGLQVYA 647
Query: 1047 DLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYL 1106
DLS AR+G VL+ + HL++L TP+ ++P ++ Y + L A +++ VGV E L
Sbjct: 648 DLSIARQGLVLSDEAHLLFLLTPVYHGIQPSYKRYVDMIKGLPAELRAIAQAVGVDEDLL 707
Query: 1107 MRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLV 1166
A A S L + K + + TSN+ + + + +RF+V L+L L+
Sbjct: 708 ---AWSARQEASGVLWQQGT-VPPKYKDKNNQTSNSSHLLLRRVEILERFWVTLMLRDLI 763
Query: 1167 QETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGV 1226
E P+ +VC +K++RG VQ LQ A F+ VS+FC +L W+ L+ L + FQ R+ G
Sbjct: 764 LEAPIQDVCSRYKMSRGTVQTLQGLASTFSGQVSIFCSKLHWWQLQVLCSSFQERLEVGG 823
Query: 1227 RAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL-----FESSSWIAEAQ 1281
+ +I+ L IP+VK RARAL+ AG+ + A+A A IV+AL F E
Sbjct: 824 QPDIISLARIPHVKNVRARALFNAGITSVEALAAAEEEHIVEALRCVMPFRLHGQTPEKV 883
Query: 1282 RRVQLGVAKKIKNGARKIVLE 1302
+++ G+AKK+ GA++ +LE
Sbjct: 884 IKIERGIAKKVIQGAKEYLLE 904
>gi|330792068|ref|XP_003284112.1| hypothetical protein DICPUDRAFT_27081 [Dictyostelium purpureum]
gi|325085926|gb|EGC39324.1| hypothetical protein DICPUDRAFT_27081 [Dictyostelium purpureum]
Length = 1172
Score = 464 bits (1195), Expect = e-127, Method: Compositional matrix adjust.
Identities = 301/855 (35%), Positives = 454/855 (53%), Gaps = 116/855 (13%)
Query: 496 SGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKS 555
S + +C + LP + IYK++G+ LY WQ ECL D +L +NLVY TS GK+
Sbjct: 385 SNDITECCEKIFKLPKTVGDIYKRKGLRNLYDWQKECLSSDDLLLGKNLVYSLPTSGGKT 444
Query: 556 FVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK 615
VAEI++ R L+ K +L + P+VSI E+ + + L V Y+G G +
Sbjct: 445 MVAEIILFRNLLIRKKKSLFIFPFVSIVTERVQAMSEFASALSFQVEGYFGCNGTMPVVP 504
Query: 616 DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAG 675
+ + TIEKAN +VN+++E+G L +IG +V+DELHM+ D +RG LLE+L++KL +
Sbjct: 505 GPRMLISTIEKANIIVNQLIEDGSLLDIGCVVVDELHMIGDGDRGELLEILISKLLFM-- 562
Query: 676 EGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
S GE +QIVGMSAT+PN+ + +W++ +YE NFRPVPL E
Sbjct: 563 ------SKGE--------------IQIVGMSATIPNIQNLKNWIRGGVYEGNFRPVPLTE 602
Query: 736 YIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCEST 795
YIK+GN +Y K ++V+T+ + + H +EL E++ + HSVL+FC S+ +
Sbjct: 603 YIKIGNNLYDKDNNLVKTLESPND----KESHTLELISEIIPK-HSVLVFCPSKAMTFNL 657
Query: 796 ARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG--LDPVLEETLPSGVAYHHAGL 853
A ++ KF N+ D + L + G +D L++ + +GVAYH++ L
Sbjct: 658 ATSLA---TKFPENILQDKR---DQRETLIQLLKSSNGSKIDEELKKMILAGVAYHNSDL 711
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +EREV+E +++ + VL ATSTL+ GVNLPARRVI R P +GRD I YRQM GR
Sbjct: 712 TNDEREVIEKGFKERSLLVLCATSTLSTGVNLPARRVILRSPTMGRDLIGNRVYRQMVGR 771
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQ 973
AGR GID GES+L+C+P + +K LLN PL SC+ + +L+ + GI
Sbjct: 772 AGRAGIDDFGESILMCEPHQAEKCKKLLNSPLDPLISCI-KSAQSFQKIVLDSICSGIGD 830
Query: 974 TAEDIHRYVRCTLL-------NSTKPF---QDVVKSAQDSLR---WLCHRKF-------- 1012
+ I ++ T KP+ + +VK+ ++L ++ KF
Sbjct: 831 SRFSILHFLSFTYYITHIKPPKGMKPYEYMEGLVKTGIETLLKEGYIQEIKFDENKKMYK 890
Query: 1013 ---LEWN----EDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD-LHLV 1064
L+ N ED+ Y T G A F S L +ES +V +L +A +G V+ S+ LH+
Sbjct: 891 NATLDLNNRPTEDSIRYEATGFGFACFRSCLNIKESKLVHAELQKAYQGSVVISEPLHMC 950
Query: 1065 YLSTP-INVEVEPDWELYYERFLEL--SALDQSVGNQVGVSEPYLMRMAHGAPMRISSKL 1121
Y++TP N+ DW Y F E+ V N +G+SE Y+++ +G
Sbjct: 951 YITTPFFNIPEVTDWNHYINLFREILKKPSKARVANVIGISEEYMIQRLNGF-------- 1002
Query: 1122 RDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVA 1181
++T+ +L+Y KRFY+A++L LV E + FK+
Sbjct: 1003 -EATE-FKEELKY-------------------KRFYIAMVLYDLVHEQQLYMAANKFKLH 1041
Query: 1182 RGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKG 1241
RG VQ L + AG F+ MVS+FC++LGW +LE L+ + R+ GV++EI+ L I VK
Sbjct: 1042 RGSVQTLMQQAGSFSWMVSLFCKKLGWIELEHLVNLYTQRLDKGVKSEIIPLVEINGVKQ 1101
Query: 1242 SRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQL-----GVAKKIKNGA 1296
+RARAL+ AG +T +IA E+ R+V L G A+ I A
Sbjct: 1102 ARARALWNAGFKTVKSIAVCPPDELA--------------RKVNLGKFGEGQARNIIREA 1147
Query: 1297 RKIVLEKAEEARIAA 1311
K++ +KAEE R A
Sbjct: 1148 GKLLEKKAEEFRAKA 1162
>gi|83767815|dbj|BAE57954.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 971
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 294/866 (33%), Positives = 444/866 (51%), Gaps = 135/866 (15%)
Query: 517 YKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI-STGKMAL 574
+ G+ +YPWQ CL V G+L+ +++LVY A T GKS VA++LML+R+I + + A+
Sbjct: 152 FASVGVKSIYPWQASCLLVPGLLEGKKHLVYTAPTGGGKSLVADVLMLKRIIENPSRKAI 211
Query: 575 LVLPYVSICAEKAEHLEVLLEPLGRH--------------------------VRSYYGNQ 608
LVLPYV++ EK + L +++ + + V ++G
Sbjct: 212 LVLPYVALVQEKLKWLRRIVQDVEKRIDDIDDQAAGVEPYHQRWKKLQKSIRVTGFFGGS 271
Query: 609 GGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLT 668
+ DT +AVCTIEKANSL+N +EE + ++G++V+DELHM+ D++RGYLLEL++T
Sbjct: 272 RTTATWADTDIAVCTIEKANSLINTAIEECNIGDLGVVVLDELHMLDDEHRGYLLELMVT 331
Query: 669 KLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNF 728
K+ + +QI+GMSAT+ N +A+W+ A Y + +
Sbjct: 332 KILLLQQD-----------------------IQIIGMSATLSNTELLAEWMNANYYISTY 368
Query: 729 RPVPLEEYIKVGNAIY--SKKMDVVRTI-----LTAANLGGKDPDH-------------- 767
RP+P+++Y+ NAIY + + +TI ++ +L P H
Sbjct: 369 RPIPIDDYLVYENAIYPAATSRQLFQTITRLASMSTVSLTDTMPPHRIIQPPAFRELANP 428
Query: 768 ----IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSA 823
+V L + G+ L+FC SR+ C+ H S + + E
Sbjct: 429 TTNAMVALSVDTAAAGYGALVFCGSRQACQ---LHASIISEAMPVPAAVDPEELSRRLDL 485
Query: 824 IDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGV 883
+ LR P+GLDPVLE TL GV +HHAG+T EERE + Y +G++RVL AT +LAAGV
Sbjct: 486 LAELRSLPSGLDPVLENTLVRGVGFHHAGMTTEEREFIAQAYDQGVLRVLVATCSLAAGV 545
Query: 884 NLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNE 943
NLPARRVI R+GR+ + RQM GRAGR G D GE+ LIC E++ + LL
Sbjct: 546 NLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDEAGETYLICGKSELQAVCDLLEA 605
Query: 944 SCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNST---KPFQDVVKSA 1000
P + SCL+ +K G+ AILE +A G+V E I YV+CTLL T K +++KSA
Sbjct: 606 DMPAIESCLAPEKRGLKRAILEAIATGLVSGLEAIKEYVKCTLLYRTMDKKIAYNIMKSA 665
Query: 1001 QDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD 1060
L+ L L N+D Y T LG+A S+ PE+ L V ++L+RA + FV+ D
Sbjct: 666 ---LQELVSEDLLHQNDDES-YVATQLGQAVVASAFTPEDGLFVYEELNRALQAFVMDGD 721
Query: 1061 LHLVYLSTPINVE--VEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAH-GAP 1114
+H+ Y+ TP+ V + DW ++ + +L LD+S +GV ++ RM GA
Sbjct: 722 MHVFYMFTPLQVAATTQVDWPIFRD---QLDNLDESGLRALQFIGVQPGFVNRMVQSGAS 778
Query: 1115 MRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEV 1174
++ D+ + + + YR R Y AL L L E P+ V
Sbjct: 779 LK-----EDTPEQIKLAVVYR-------------------RAYTALQLRDLSNEVPLSVV 814
Query: 1175 CETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELT 1234
++ RG VQ L + FA+ + FC+R+GW L ++ ++R+ G RA+++E+
Sbjct: 815 ASRYRTPRGAVQTLAQQCHGFAAGMVKFCQRMGWGMLAAVLDHMRDRLEAGARADLLEMA 874
Query: 1235 TIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF--------ESSSWIAEAQRRVQL 1286
+ YVKG AR L G R A+AEA ++V L S + +EA+R
Sbjct: 875 QVTYVKGWTARLLRDNGFRNLRALAEADAKDLVPILMMVNPRKAQRSQTHTSEAER---- 930
Query: 1287 GVAKKIKNGARKIVLEKAEEARIAAF 1312
AKK+ A IV A +I AF
Sbjct: 931 -YAKKLLAKAEVIV---ASANKIWAF 952
>gi|119496737|ref|XP_001265142.1| DNA-directed DNA polymerase theta, putative [Neosartorya fischeri
NRRL 181]
gi|119413304|gb|EAW23245.1| DNA-directed DNA polymerase theta, putative [Neosartorya fischeri
NRRL 181]
Length = 940
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 279/820 (34%), Positives = 426/820 (51%), Gaps = 109/820 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + + G++ +YPWQ CL G+L+ R+LVY A T GKS VA++LML+R+I
Sbjct: 123 LPPALVANFAALGVTSIYPWQASCLLARGLLEGERHLVYTAPTGGGKSLVADVLMLKRII 182
Query: 568 S-TGKMALLVLPYVSICAEKAEHLEVLLEPLGRHV--------RS--------------- 603
+ A+LVLPYV++ EK + L ++E + ++V RS
Sbjct: 183 EHPSRKAILVLPYVALVQEKLKWLRRIVENVEKNVPDDDDETARSKPYYQRWKKLQKSIR 242
Query: 604 ---YYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRG 660
Y+G + DT +AVCTIEKANSL+N +EE + ++G++V+DELHM+ D++RG
Sbjct: 243 VTGYFGGSRTAASWADTDIAVCTIEKANSLINSAVEECSIGDLGVVVLDELHMLDDEHRG 302
Query: 661 YLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQ 720
Y+LEL++TKL + +QI+GMSAT+ N +ADW+
Sbjct: 303 YILELMVTKLLLLQQD-----------------------IQIIGMSATLSNTELLADWMN 339
Query: 721 AALYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTI-----LTAANLGGKDPDH------ 767
A + + +RPVP++EY+ NAIY + + +TI + +L P H
Sbjct: 340 AMYFISTYRPVPIDEYLVYENAIYPAATSRQLFQTITRLKSMKTISLTDTIPPHRMIQCS 399
Query: 768 ------------IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDS 815
+V L + G+ L+FC SR+GC+ +A +S+ + S S
Sbjct: 400 KHRELANPMTNAMVALAVDTAAAGYGALVFCGSRQGCQISAGIISEAMPAVSGLEADELS 459
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
+ +D+ + LR P+GLDPVLE T+ GV +HHAG+T EERE++ Y +G+++V+ A
Sbjct: 460 KRLDLLAD---LRSLPSGLDPVLENTILKGVGFHHAGMTTEERELIAQAYDQGVLKVIVA 516
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVK 935
T +LAAGVNLPARRVI R+GR+ + RQM GRAGR G D GE+ LIC +++
Sbjct: 517 TCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDNAGETYLICGKVDIQ 576
Query: 936 KIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQD 995
+ LL P + SCL+ +K G+ A+LE +A G+V E I YV+CTLL T +
Sbjct: 577 AVCDLLEADMPAIESCLAPEKRGLKRALLEAIATGLVSGCEAIKEYVKCTLLYRTVDKKI 636
Query: 996 VVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGF 1055
Q SL+ L L + ED Y T LG+A S+ PE+ L V ++L RA F
Sbjct: 637 ASSIMQSSLQDLIDEGLLIFKEDES-YQATKLGQAVVASAFAPEDGLFVYEELKRALRAF 695
Query: 1056 VLASDLHLVYLSTPINVEV--EPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMA--H 1111
V+ D+H+ Y+ TPI V + + DW ++ E+ L VGV +PY + +
Sbjct: 696 VMDGDMHIFYMFTPIQVAMNTQIDWLIFREQLDNLDESGLRALQFVGV-QPYFVNLMVQS 754
Query: 1112 GAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPV 1171
G ++ D+ + + YR R Y A L L E P+
Sbjct: 755 GGSLK-----EDNPEQIKQATIYR-------------------RAYTAFQLRDLSNEVPL 790
Query: 1172 LEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIV 1231
+ + + RG VQ L + FA+ + FC+R+ W L ++ ++R+ G RA+++
Sbjct: 791 STIASRYNIPRGAVQTLAQQCHGFAAGMVKFCQRMDWGMLAAVLDHMRDRLEAGARADLL 850
Query: 1232 ELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
E+ + YVKG AR L + G R +AEA ++V L
Sbjct: 851 EMAQVTYVKGWTARLLRENGFRNLRDLAEAEAKDLVPVLM 890
>gi|317144178|ref|XP_001819956.2| DNA-directed DNA polymerase theta [Aspergillus oryzae RIB40]
Length = 935
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 286/847 (33%), Positives = 435/847 (51%), Gaps = 121/847 (14%)
Query: 521 GISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI-STGKMALLVLP 578
G+ +YPWQ CL V G+L+ +++LVY A T GKS VA++LML+R+I + + A+LVLP
Sbjct: 131 GVKSIYPWQASCLLVPGLLEGKKHLVYTAPTGGGKSLVADVLMLKRIIENPSRKAILVLP 190
Query: 579 YVSICAEKAEHLEVLLEPLGRH--------------------------VRSYYGNQGGGS 612
YV++ EK + L +++ + + V ++G +
Sbjct: 191 YVALVQEKLKWLRRIVQDVEKRIDDIDDQAAGVEPYHQRWKKLQKSIRVTGFFGGSRTTA 250
Query: 613 LPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRY 672
DT +AVCTIEKANSL+N +EE + ++G++V+DELHM+ D++RGYLLEL++TK+
Sbjct: 251 TWADTDIAVCTIEKANSLINTAIEECNIGDLGVVVLDELHMLDDEHRGYLLELMVTKILL 310
Query: 673 AAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVP 732
+ +QI+GMSAT+ N +A+W+ A Y + +RP+P
Sbjct: 311 LQQD-----------------------IQIIGMSATLSNTELLAEWMNANYYISTYRPIP 347
Query: 733 LEEYIKVGNAIY--SKKMDVVRTI-----LTAANLGGKDPDH------------------ 767
+++Y+ NAIY + + +TI ++ +L P H
Sbjct: 348 IDDYLVYENAIYPAATSRQLFQTITRLASMSTVSLTDTMPPHRIIQPPAFRELANPTTNA 407
Query: 768 IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDAL 827
+V L + G+ L+FC SR+ C+ H S + + E + L
Sbjct: 408 MVALSVDTAAAGYGALVFCGSRQACQ---LHASIISEAMPVPAAVDPEELSRRLDLLAEL 464
Query: 828 RRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPA 887
R P+GLDPVLE TL GV +HHAG+T EERE + Y +G++RVL AT +LAAGVNLPA
Sbjct: 465 RSLPSGLDPVLENTLVRGVGFHHAGMTTEEREFIAQAYDQGVLRVLVATCSLAAGVNLPA 524
Query: 888 RRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPP 947
RRVI R+GR+ + RQM GRAGR G D GE+ LIC E++ + LL P
Sbjct: 525 RRVIINGARMGRELVGPAMLRQMCGRAGRKGKDEAGETYLICGKSELQAVCDLLEADMPA 584
Query: 948 LHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNST---KPFQDVVKSAQDSL 1004
+ SCL+ +K G+ AILE +A G+V E I YV+CTLL T K +++KSA L
Sbjct: 585 IESCLAPEKRGLKRAILEAIATGLVSGLEAIKEYVKCTLLYRTMDKKIAYNIMKSA---L 641
Query: 1005 RWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
+ L L N+D Y T LG+A S+ PE+ L V ++L+RA + FV+ D+H+
Sbjct: 642 QELVSEDLLHQNDDES-YVATQLGQAVVASAFTPEDGLFVYEELNRALQAFVMDGDMHVF 700
Query: 1065 YLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLR 1122
Y+ TP+ V + DW ++ ++ L +GV ++ RM + L+
Sbjct: 701 YMFTPLQVAATTQVDWPIFRDQLDNLDESGLRALQFIGVQPGFVNRMVQSG-----ASLK 755
Query: 1123 DSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVAR 1182
+ T + +L + V +R Y AL L L E P+ V ++ R
Sbjct: 756 EDTPE-----QIKLAV-------------VYRRAYTALQLRDLSNEVPLSVVASRYRTPR 797
Query: 1183 GMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGS 1242
G VQ L + FA+ + FC+R+GW L ++ ++R+ G RA+++E+ + YVKG
Sbjct: 798 GAVQTLAQQCHGFAAGMVKFCQRMGWGMLAAVLDHMRDRLEAGARADLLEMAQVTYVKGW 857
Query: 1243 RARALYKAGLRTPLAIAEASISEIVKALF--------ESSSWIAEAQRRVQ--LGVAKKI 1292
AR L G R A+AEA ++V L S + +EA+R + L A+ I
Sbjct: 858 TARLLRDNGFRNLRALAEADAKDLVPILMMVNPRKAQRSQTHTSEAERYAKKLLAKAEVI 917
Query: 1293 KNGARKI 1299
A KI
Sbjct: 918 VASANKI 924
>gi|70990852|ref|XP_750275.1| DNA-directed DNA polymerase theta [Aspergillus fumigatus Af293]
gi|66847907|gb|EAL88237.1| DNA-directed DNA polymerase theta, putative [Aspergillus fumigatus
Af293]
gi|159130748|gb|EDP55861.1| DNA-directed DNA polymerase theta, putative [Aspergillus fumigatus
A1163]
Length = 940
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 277/820 (33%), Positives = 423/820 (51%), Gaps = 109/820 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + G++ +YPWQ CL G+L+ R+LVY A T GKS VA++LML+R+I
Sbjct: 123 LPPALVANLAALGVTSIYPWQASCLLARGLLEGERHLVYTAPTGGGKSLVADVLMLKRII 182
Query: 568 S-TGKMALLVLPYVSICAEKAEHLEVLLEPLGRHV------------------------- 601
+ A+LVLPYV++ EK + L ++E + ++V
Sbjct: 183 EHPSRKAILVLPYVALVQEKLKWLRRIVENVEKNVPDDDDEAARLKPYYQRWKKLQKSIR 242
Query: 602 -RSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRG 660
Y+G + DT +AVCTIEKANSL+N +EE + ++G++V+DELHM+ D+NRG
Sbjct: 243 VTGYFGGSRTAASWADTDIAVCTIEKANSLINTAVEECSIGDLGVVVLDELHMLDDENRG 302
Query: 661 YLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQ 720
Y+LEL++TKL + +QI+GMSAT+ N +ADW+
Sbjct: 303 YILELMVTKLLLLQQD-----------------------IQIIGMSATLSNTELLADWMN 339
Query: 721 AALYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTI-----LTAANLGGKDPDH------ 767
A + + +RPVP++EY+ NAIY + + +TI + +L P H
Sbjct: 340 AKYFISTYRPVPIDEYLVYENAIYPAATSRQLFQTITRLKSMKTISLTDTIPPHRMIQCS 399
Query: 768 ------------IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDS 815
+V L + G+ L+FC SR+GC+ +A +S+ + S S
Sbjct: 400 KHRELANPMTNAMVALAVDTAAAGYGALVFCGSRQGCQISAGIISEAMPAVSGLEADELS 459
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
+ +D+ + LR P+GLDPVLE T+ GV +HHAG+T EERE++ Y +G+++V+ A
Sbjct: 460 KRLDLLAD---LRSLPSGLDPVLENTILKGVGFHHAGMTTEERELIAQAYDQGVLKVIVA 516
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVK 935
T +LAAGVNLPARRVI R+GR+ + RQM GRAGR G D GE+ LIC +++
Sbjct: 517 TCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDNTGETYLICGKADIQ 576
Query: 936 KIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQD 995
+ LL P + SCL+ +K G+ A+LE +A G+V E I YV+CTLL T +
Sbjct: 577 AVCDLLEADMPAIESCLAPEKRGLKRALLEAIATGLVSGCEAIKEYVKCTLLYRTVDKKI 636
Query: 996 VVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGF 1055
Q SL+ L L + ED Y+ T LG+A S+ PE+ L V ++L RA F
Sbjct: 637 ASSIMQSSLQELIDEGLLVFKEDES-YAATKLGQAVVASAFAPEDGLFVYEELKRALRAF 695
Query: 1056 VLASDLHLVYLSTPINVEV--EPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMA--H 1111
V+ D+H+ Y+ TPI V + + DW ++ E+ L VGV +PY + +
Sbjct: 696 VMDGDMHVFYMFTPIQVAMNTQIDWLIFREQLDNLDESGLRALQFVGV-QPYFVNLMVQS 754
Query: 1112 GAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPV 1171
G ++ D+ + + YR R Y A L L E P+
Sbjct: 755 GGSLK-----EDNPEQIKQATIYR-------------------RAYTAFQLRDLSNEVPL 790
Query: 1172 LEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIV 1231
+ + + RG VQ L + FA+ + FC+R+ W L ++ ++R+ G RA+++
Sbjct: 791 STIASRYNIPRGAVQTLAQQCHGFAAGMVKFCQRMDWGMLAAVLDHMRDRLEAGARADLL 850
Query: 1232 ELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
E+ + YVKG AR L + G R +A A ++V L
Sbjct: 851 EMAQVTYVKGWTARLLRENGFRNLRDLAGADAKDLVPVLM 890
>gi|317025341|ref|XP_001388880.2| DNA-directed DNA polymerase theta [Aspergillus niger CBS 513.88]
Length = 938
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 276/818 (33%), Positives = 420/818 (51%), Gaps = 106/818 (12%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + + G+S +Y WQ CL G+L+ R+LVY A T GKS VA++LML+R+I
Sbjct: 123 LPPGLVANFAAAGLSSIYQWQASCLLAPGLLKGDRHLVYTAPTGGGKSLVADVLMLKRII 182
Query: 568 -STGKMALLVLPYVSICAEKAEHLEVLLE------------------------PLGRHVR 602
+ G+ A+LVLPYV++ EK + L +++ L R +R
Sbjct: 183 ENPGRKAILVLPYVALVQEKLKWLRRIVQDVEKITLDAEDQAVNEKLYHHRWNKLQRSIR 242
Query: 603 --SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRG 660
YYG + DT +AVCTIEKANSL+N +EE + ++G++V+DELHM+ D++RG
Sbjct: 243 VTGYYGGSRTAASWADTDIAVCTIEKANSLINSAIEECSIGDLGVVVLDELHMLDDEHRG 302
Query: 661 YLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQ 720
YLLEL++TKL QI+GMSAT+ N +A+W+
Sbjct: 303 YLLELMVTKLLLL-----------------------RQRTQIIGMSATLSNTEMLAEWMN 339
Query: 721 AALYETNFRPVPLEEYIKVGNAIYS--------KKMDVVRTILTAANLGGKDPDHI---- 768
AA + + +RP+P+++Y+ NAIY + + ++++ A + PD +
Sbjct: 340 AAYFVSTYRPIPIDDYLVYENAIYPAATSRQLFQTISKLKSMSNATLMERMPPDRVIRPS 399
Query: 769 -------------VELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDS 815
V L + GH L+FC SR C+ A +S+ + + N
Sbjct: 400 TFRELANPMTNATVALAIDTAGAGHGALVFCGSRHMCQIQAVVMSEAMPAPADNT----D 455
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
E + LR P+GLDPVLE+TL GV +HHAG+T EERE++ Y +G++R L A
Sbjct: 456 ELTKRLDLLAELRSLPSGLDPVLEKTLVRGVGFHHAGMTAEERELIAQAYDQGVLRTLIA 515
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVK 935
T +LAAGVNLPARRVI R+GR+ + RQM GRAGR G D GE+ LIC +++
Sbjct: 516 TCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDDAGETYLICGDSDLQ 575
Query: 936 KIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQD 995
+ LL P + SCL+ +K G+ A+LE +A G+V + I YVRCTLL T +
Sbjct: 576 AVCDLLEAEMPAIESCLAPEKRGLKRALLEAIATGLVSGNDAIKEYVRCTLLYLTVDKKV 635
Query: 996 VVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGF 1055
+L+ L ++ N+D YS+T LG+A S+ PE+ L V ++L RA + F
Sbjct: 636 AYAIMGSALQELATEGLVQLNDDES-YSSTQLGQAVVASAFAPEDGLFVFEELKRALQAF 694
Query: 1056 VLASDLHLVYLSTPINVEVEP--DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGA 1113
V+ D+H+ YL TP+ DW ++ ++ L VGVS ++ MA
Sbjct: 695 VMDGDMHIFYLFTPLQAATATPIDWLIFRDQLDNLDESGLRALQFVGVSPGFVNTMAQSG 754
Query: 1114 PMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLE 1173
+ L+++T R+ +R Y A L L E P+
Sbjct: 755 -----ASLKENTP------------------EQMNQARIYRRAYTAFQLRDLSNEMPLSA 791
Query: 1174 VCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVEL 1233
V +++ RG VQ L + FA+ + FC+R+ W L ++ ++R+ G RA+++E+
Sbjct: 792 VANRYRIPRGAVQTLAQQCHGFAAGIVKFCQRMNWGMLAAVLDHMRDRLEAGARADLLEM 851
Query: 1234 TTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
+ YVKG AR L + G R A+AEA ++V L
Sbjct: 852 AQVTYVKGWTARLLRENGFRNLRALAEADAKDLVPILM 889
>gi|391874324|gb|EIT83230.1| DNA polymerase theta/eta, DEAD-box superfamily [Aspergillus oryzae
3.042]
Length = 960
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 285/851 (33%), Positives = 436/851 (51%), Gaps = 121/851 (14%)
Query: 517 YKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI-STGKMAL 574
+ G+ +YPWQ CL V G+L+ +++LVY A T GKS VA++LML+R+I + + A+
Sbjct: 152 FASVGVKSIYPWQASCLLVPGLLEGKKHLVYTAPTGGGKSLVADVLMLKRIIENPSRKAI 211
Query: 575 LVLPYVSICAEKAEHLEVLLEPLGRH--------------------------VRSYYGNQ 608
LVLPYV++ EK + L +++ + + V ++G
Sbjct: 212 LVLPYVALVQEKLKWLRRIVQDVEKRIDDIDDQAAGVEPYHQRWKKLQKSIRVTGFFGGS 271
Query: 609 GGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLT 668
+ DT +AVCTIEKANSL+N +EE + ++G++V+DELHM+ D++RGYLLEL++T
Sbjct: 272 RTTATWADTDIAVCTIEKANSLINTAIEECNIGDLGVVVLDELHMLDDEHRGYLLELMVT 331
Query: 669 KLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNF 728
K+ + +QI+GMSAT+ N +A+W+ A Y + +
Sbjct: 332 KILLLQQD-----------------------IQIIGMSATLSNTELLAEWMNANYYISTY 368
Query: 729 RPVPLEEYIKVGNAIY--SKKMDVVRTI-----LTAANLGGKDPDH-------------- 767
RP+P+++Y+ NAIY + + +TI ++ +L P H
Sbjct: 369 RPIPIDDYLVYENAIYPAATSRQLFQTITRLASMSTVSLTDTMPPHRIIQPPAFRELANP 428
Query: 768 ----IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSA 823
+V L + G+ L+FC SR+ C+ H S + + E
Sbjct: 429 TTNAMVALSVDTAAAGYGALVFCGSRQACQ---LHASIISEAMPVPAAVDPEELSRRLDL 485
Query: 824 IDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGV 883
+ LR P+GLDPVLE TL GV +HHAG+T EERE + Y +G++RVL AT +LAAGV
Sbjct: 486 LAELRSLPSGLDPVLENTLVRGVGFHHAGMTTEEREFIAQAYDQGVLRVLVATCSLAAGV 545
Query: 884 NLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNE 943
NLPARRVI R+GR+ + RQM GRAGR G D GE+ LIC E++ + LL
Sbjct: 546 NLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDEAGETYLICGKSELQAVCDLLEA 605
Query: 944 SCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDS 1003
P + SCL+ +K G+ AILE +A G+V E I YV+CTLL T + + +
Sbjct: 606 DMPAIESCLAPEKRGLKRAILEAIATGLVSGLEAIKEYVKCTLLYRTMDKKIAYNIMKSA 665
Query: 1004 LRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHL 1063
L+ L L N+D Y T LG+A S+ PE+ L V ++L+RA + FV+ D+H+
Sbjct: 666 LQELVSEDLLHQNDDES-YVATQLGQAVVASAFTPEDGLFVYEELNRALQAFVMDGDMHV 724
Query: 1064 VYLSTPINVE--VEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAHGAPMRIS 1118
Y+ TP+ V + DW ++ + +L LD+S +GV ++ RM
Sbjct: 725 FYMFTPLQVAATTQVDWPIFRD---QLDNLDESGLRALQFIGVQPGFVNRMVQSG----- 776
Query: 1119 SKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETF 1178
+ L++ T + +L + V +R Y AL L L E P+ V +
Sbjct: 777 ASLKEDTPE-----QIKLAV-------------VYRRAYTALQLRDLSNEVPLSVVASRY 818
Query: 1179 KVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPY 1238
+ RG VQ L + FA+ + FC+R+GW L ++ ++R+ G RA+++E+ + Y
Sbjct: 819 RTPRGAVQTLAQQCHGFAAGMVKFCQRMGWGMLAAVLDHMRDRLEAGARADLLEMAQVTY 878
Query: 1239 VKGSRARALYKAGLRTPLAIAEASISEIVKALF--------ESSSWIAEAQRRVQ--LGV 1288
VKG AR L G R A+AEA ++V L S + +EA+R + L
Sbjct: 879 VKGWTARLLRDNGFRNLRALAEADAKDLVPILMMVNPRKAQRSQTHPSEAERYAKKLLAK 938
Query: 1289 AKKIKNGARKI 1299
A+ I A KI
Sbjct: 939 AEVIVASANKI 949
>gi|238486540|ref|XP_002374508.1| DNA-directed DNA polymerase theta, putative [Aspergillus flavus
NRRL3357]
gi|220699387|gb|EED55726.1| DNA-directed DNA polymerase theta, putative [Aspergillus flavus
NRRL3357]
Length = 935
Score = 459 bits (1180), Expect = e-125, Method: Compositional matrix adjust.
Identities = 281/844 (33%), Positives = 432/844 (51%), Gaps = 115/844 (13%)
Query: 521 GISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI-STGKMALLVLP 578
G+ +YPWQ CL V G+L+ +++LVY A T GKS VA++LML+R+I + + A+LVLP
Sbjct: 131 GVKSIYPWQASCLLVPGLLEGKKHLVYTAPTGGGKSLVADVLMLKRIIENPSRKAILVLP 190
Query: 579 YVSICAEKAEHLEVLLEPLGRH--------------------------VRSYYGNQGGGS 612
YV++ EK + L +++ + + V ++G +
Sbjct: 191 YVALVQEKLKWLRRIVQDVEKRIDDIDDQAAGVEPYHQRWKKLQKSIRVTGFFGGSRTTA 250
Query: 613 LPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRY 672
DT +AVCTIEKAN+L+N +EE + ++G++V+DELHM+ D++RGYLLEL++TK+
Sbjct: 251 TWADTDIAVCTIEKANTLINTAIEECNIGDLGVVVLDELHMLDDEHRGYLLELMVTKILL 310
Query: 673 AAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVP 732
+ +QI+GMSAT+ N +A+W+ A Y + +RP+P
Sbjct: 311 LQQD-----------------------IQIIGMSATLSNTELLAEWMNANYYISTYRPIP 347
Query: 733 LEEYIKVGNAIY--SKKMDVVRTI-----LTAANLGGKDPDH------------------ 767
+++Y+ NAIY + + +TI ++ +L P H
Sbjct: 348 IDDYLVYENAIYPAATSRQLFQTITRLASMSTVSLTDTMPPHRIIQPPAFRELANPTTNA 407
Query: 768 IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDAL 827
+V L + G+ L+FC SR+ C+ H S + + + E + L
Sbjct: 408 MVALSVDTAAAGYGALVFCGSRQACQ---LHASIISEAMPVPAAVNPEELSRRLDLLAEL 464
Query: 828 RRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPA 887
R P+GLDPVLE TL GV +HHAG+T EERE + Y +G++RVL AT +LAAGVNLPA
Sbjct: 465 RSLPSGLDPVLENTLVRGVGFHHAGMTTEEREFIAQAYDQGILRVLVATCSLAAGVNLPA 524
Query: 888 RRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPP 947
RRVI R+GR+ + RQM GRAGR G D GE+ LIC E++ + LL P
Sbjct: 525 RRVIINGARMGRELVGPAMLRQMCGRAGRKGKDEAGETYLICGKSELQAVCDLLEADMPA 584
Query: 948 LHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWL 1007
+ SCL+ +K G+ AILE +A G+V E I YV+CTLL T + + +L+ L
Sbjct: 585 IESCLAPEKRGLKRAILEAIATGLVSGLEAIKEYVKCTLLYRTMDKKIAYNIMKSALQEL 644
Query: 1008 CHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLS 1067
L N+D Y T LG+A S+ PE+ L V ++L+RA + FV+ D+H+ Y+
Sbjct: 645 VSEDLLHQNDDES-YVATQLGQAVVASAFTPEDGLFVYEELNRALQAFVMDGDMHVFYMF 703
Query: 1068 TPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDST 1125
TP+ V + DW ++ ++ L +GV ++ RM + L++ T
Sbjct: 704 TPLQVAATTQVDWPIFRDQLDNLDESGLRALQFIGVQPGFVNRMVQSG-----ASLKEDT 758
Query: 1126 KGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMV 1185
+ +L + V +R Y AL L L E P+ V ++ RG V
Sbjct: 759 PE-----QIKLAV-------------VYRRTYTALQLRDLSNEVPLSVVASRYRTPRGAV 800
Query: 1186 QALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1245
Q L + FA+ + FC+R+GW L ++ ++R+ G RA+++E+ + YVKG AR
Sbjct: 801 QTLAQQCHGFAAGMVKFCQRMGWGMLAAVLDHMRDRLEAGARADLLEMAQVTYVKGWTAR 860
Query: 1246 ALYKAGLRTPLAIAEASISEIVKALF--------ESSSWIAEAQRRVQ--LGVAKKIKNG 1295
L G R A+AEA ++V L S + +EA+R + L A+ I
Sbjct: 861 LLRDNGFRNLRALAEADAKDLVPILMMVNPRKAQRSQTHPSEAERYAKKLLAKAEVIVAS 920
Query: 1296 ARKI 1299
A KI
Sbjct: 921 ANKI 924
>gi|350638044|gb|EHA26400.1| hypothetical protein ASPNIDRAFT_36173 [Aspergillus niger ATCC 1015]
Length = 932
Score = 458 bits (1179), Expect = e-125, Method: Compositional matrix adjust.
Identities = 276/818 (33%), Positives = 420/818 (51%), Gaps = 106/818 (12%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + + G+S +Y WQ CL G+L+ R+LVY A T GKS VA++LML+R+I
Sbjct: 123 LPPGLVANFAAAGLSSIYQWQASCLLAPGLLKGDRHLVYTAPTGGGKSLVADVLMLKRII 182
Query: 568 -STGKMALLVLPYVSICAEKAEHLEVLLE------------------------PLGRHVR 602
+ G+ A+LVLPYV++ EK + L +++ L R +R
Sbjct: 183 ENPGRKAILVLPYVALVQEKLKWLRRIVQDVEKITLDAEDQAVNEKLYHHRWNKLQRSIR 242
Query: 603 --SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRG 660
YYG + DT +AVCTIEKANSL+N +EE + ++G++V+DELHM+ D++RG
Sbjct: 243 VTGYYGGSRTAASWADTDIAVCTIEKANSLINSAIEECSIGDLGVVVLDELHMLDDEHRG 302
Query: 661 YLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQ 720
YLLEL++TKL QI+GMSAT+ N +A+W+
Sbjct: 303 YLLELMVTKLLLL-----------------------RQRTQIIGMSATLSNTEMLAEWMN 339
Query: 721 AALYETNFRPVPLEEYIKVGNAIYS--------KKMDVVRTILTAANLGGKDPDHI---- 768
AA + + +RP+P+++Y+ NAIY + + ++++ A + PD +
Sbjct: 340 AAYFVSTYRPIPIDDYLVYENAIYPAATSRQLFQTISKLKSMSNATLMERMPPDRVIRPS 399
Query: 769 -------------VELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDS 815
V L + GH L+FC SR C+ A +S+ + + N
Sbjct: 400 TFRELANPMTNATVALAIDTAGAGHGALVFCGSRHMCQIQAVVMSEAMPAPADNT----D 455
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
E + LR P+GLDPVLE+TL GV +HHAG+T EERE++ Y +G++R L A
Sbjct: 456 ELTKRLDLLAELRSLPSGLDPVLEKTLVRGVGFHHAGMTAEERELIAQAYDQGVLRTLIA 515
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVK 935
T +LAAGVNLPARRVI R+GR+ + RQM GRAGR G D GE+ LIC +++
Sbjct: 516 TCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDDAGETYLICGDSDLQ 575
Query: 936 KIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQD 995
+ LL P + SCL+ +K G+ A+LE +A G+V + I YVRCTLL T +
Sbjct: 576 AVCDLLEAEMPAIESCLAPEKRGLKRALLEAIATGLVSGNDAIKEYVRCTLLYLTVDKKV 635
Query: 996 VVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGF 1055
+L+ L ++ N+D YS+T LG+A S+ PE+ L V ++L RA + F
Sbjct: 636 AYGIMGSALQELATEGLVQLNDDES-YSSTQLGQAVVASAFAPEDGLFVFEELKRALQAF 694
Query: 1056 VLASDLHLVYLSTPINVEVEP--DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGA 1113
V+ D+H+ YL TP+ DW ++ ++ L VGVS ++ MA
Sbjct: 695 VMDGDMHIFYLFTPLQAATATPIDWLIFRDQLDNLDESGLRALQFVGVSPGFVNTMAQSG 754
Query: 1114 PMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLE 1173
+ L+++T R+ +R Y A L L E P+
Sbjct: 755 -----ASLKENTP------------------EQMNQARIYRRAYTAFQLRDLSNEMPLSA 791
Query: 1174 VCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVEL 1233
V +++ RG VQ L + FA+ + FC+R+ W L ++ ++R+ G RA+++E+
Sbjct: 792 VANRYRIPRGAVQTLAQQCHGFAAGIVKFCQRMNWGMLAAVLDHMRDRLEAGARADLLEM 851
Query: 1234 TTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
+ YVKG AR L + G R A+AEA ++V L
Sbjct: 852 AQVTYVKGWTARLLRENGFRNLRALAEADAKDLVPILM 889
>gi|354505767|ref|XP_003514939.1| PREDICTED: helicase POLQ [Cricetulus griseus]
Length = 1012
Score = 458 bits (1179), Expect = e-125, Method: Compositional matrix adjust.
Identities = 295/826 (35%), Positives = 448/826 (54%), Gaps = 101/826 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +RRNL+Y TS GK+ VAEILML+ L+
Sbjct: 232 LPSKVRDLYVQLKGIKKLYDWQHTCLTLSSVQKRRNLIYSLPTSGGKTLVAEILMLQELL 291
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 292 CRQKDVLMILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 351
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+S +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 352 EKGHSLVNALIETGRISTLGLVVVDELHMIGEGSRGAILEMTLAKVLY-----TSKTT-- 404
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + ++L+A Y + FRPV L+EY+KV + IY
Sbjct: 405 ----------------QIIGMSATLNNVEDLQEFLKAEYYTSQFRPVELKEYLKVNDTIY 448
Query: 745 SKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
+ + L K DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 449 EVDSRAANGMTFSRLLNYKYSDALRKMDPDHLVALVTEVI-PNYSCLVFCPSKKNCENVA 507
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K +N H + + + I LR G + PVL+ T+P GVAYHH+GLT
Sbjct: 508 EMLCKFLSKDYLN-HRDEEK----SEVIKNLRNVGNGKVCPVLKRTIPFGVAYHHSGLTT 562
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER ++E Y G++ + T TSTLAAGVNLPARRVI R P + R+F+ +Y+QM GRAG
Sbjct: 563 DERRLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAREFLRRNQYKQMIGRAG 622
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+L+ + ++ ++++ L+N PL +C S E G+ L ++ I
Sbjct: 623 RAGIDTVGESILVLQEKDKQQVLELIN---GPLENCYSHLIEEFSKGIQSLFLSLIGLKI 679
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFL--EWNEDTKL---Y 1022
+ DI++++ T + KS DSL +L + L E DT+L +
Sbjct: 680 ATSLGDIYQFMNGTFFGVQQKILLKEKSLWEITVDSLSYLTEKGLLQKESRGDTELESHF 739
Query: 1023 STTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWEL 1080
T LG+A+F ++ + DL + EG VL S LHLVYL+TP ++ + EPDW +
Sbjct: 740 RVTKLGQASFKGAIDLAYCDTLYRDLKKGLEGLVLESLLHLVYLTTPYDLVAQTEPDWMV 799
Query: 1081 YYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITS 1140
Y+ +F +LS +Q+V +GVSE ++ + A G +R K D
Sbjct: 800 YFRQFSQLSPAEQNVAALLGVSESFIGKKASGQAIR---KKVDKN--------------- 841
Query: 1141 NNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVS 1200
+ R Y++ +L L++ET + V E F + RG +Q L A F+S V
Sbjct: 842 -----------IVNRLYLSFVLYSLLKETNIWSVSEKFNMPRGYIQNLLTGAASFSSCVL 890
Query: 1201 VFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIA 1259
FCE L ++ + L+ + ++++ V+AE++ L + V RA+ LY AG ++ + +A
Sbjct: 891 HFCEELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSVMHLA 950
Query: 1260 EASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 951 NANPEVLVRT-------IGHLSRR----QAKQIVSSAKMLLHEKAE 985
>gi|121702745|ref|XP_001269637.1| DNA-directed DNA polymerase theta, putative [Aspergillus clavatus
NRRL 1]
gi|119397780|gb|EAW08211.1| DNA-directed DNA polymerase theta, putative [Aspergillus clavatus
NRRL 1]
Length = 940
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 275/818 (33%), Positives = 421/818 (51%), Gaps = 105/818 (12%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + + G++ +YPWQ CL G+L+ R+LVY A T GKS VA++LML+R+I
Sbjct: 124 LPPSLVANFAALGVTSIYPWQASCLLFRGLLEGERHLVYTAPTGGGKSLVADVLMLKRII 183
Query: 568 ST-GKMALLVLPYVSICAEKAEHLEVLLEPLGR--------------------------H 600
+ A+LVLPYV++ EK + L +++ + +
Sbjct: 184 EKPSRKAILVLPYVALVQEKLKWLRRIVQDVEKKVPDDDDEITRSKPYYQRWKKLQKSIR 243
Query: 601 VRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRG 660
V Y+G + DT +AVCTIEKANSL+N +EE + ++G++V+DELHM+ D++RG
Sbjct: 244 VTGYFGGSRTAASWADTDIAVCTIEKANSLINTAVEECTIGDLGVVVLDELHMLDDEHRG 303
Query: 661 YLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQ 720
Y+LEL++TKL + +QI+GMSAT+ N +ADW+
Sbjct: 304 YILELMVTKLLLLRQD-----------------------IQIIGMSATLSNTELLADWMN 340
Query: 721 AALYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTIL-----TAANLGGKDPDH------ 767
A + + +RPVP++EY+ NAIY + + +TI A+L P H
Sbjct: 341 AKFFISTYRPVPIDEYLIYENAIYPAATSRQLFQTITRLQQTKTASLTDTMPPHRLIQPS 400
Query: 768 ------------IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDS 815
+V L + G+ L+FC SR+GC+ +A +S+ + S S
Sbjct: 401 KFRQLENPMTNAMVALAVDTAIAGYGALVFCGSRQGCQISAAIISEAMPTVSEIDAEELS 460
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
+ +D+ + LR P+GLDPVLE GV +HHAG+T EERE + Y +G+++V+ A
Sbjct: 461 KRLDLLAE---LRSLPSGLDPVLENITLKGVGFHHAGMTTEEREFIAQAYDQGVLKVIVA 517
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVK 935
T +LAAGVNLPARRVI R+GR+ + RQM GRAGR G D GE+ LIC +++
Sbjct: 518 TCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDDAGETYLICGKADIQ 577
Query: 936 KIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQD 995
+ LL P + SCL+ +K G+ A+LE +A G+V E I YVRCTLL T +
Sbjct: 578 AVCDLLEADMPAIESCLAPEKRGLKRALLEAIATGLVSGCEAIKEYVRCTLLYRTVDKKL 637
Query: 996 VVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGF 1055
SL+ L + L ED Y T LG+A S+ PE+ L V ++L RA + F
Sbjct: 638 AYTIMASSLQELVDEELLILREDES-YEATKLGQAVVASAFAPEDGLFVHEELKRALKAF 696
Query: 1056 VLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGA 1113
V+ ++H+ Y+ TPI V ++ DW ++ ++ L VGV +PY + M
Sbjct: 697 VMDGEMHIFYMFTPIQVAMNIQIDWLIFRDQLDNLDESGLRALQFVGV-QPYFVNMM--- 752
Query: 1114 PMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLE 1173
++ L++ T + + +R Y A L L E P+
Sbjct: 753 -VQTGGWLKEETP------------------EQIKQATIYRRAYTAFQLRDLSNEVPLST 793
Query: 1174 VCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVEL 1233
+ + + RG VQ L + FA+ + FC+R+ W L ++ ++R+ G RA+++E+
Sbjct: 794 IANRYNIPRGAVQTLAQQCHGFAAGMVKFCQRMDWGMLAAVLDHMRDRLEAGARADLLEM 853
Query: 1234 TTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
+ YVKG AR L + G R A+AEA +IV L
Sbjct: 854 AQVTYVKGWTARLLRENGFRNLRALAEADAKDIVPVLM 891
>gi|449499812|ref|XP_004176332.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Taeniopygia
guttata]
Length = 1050
Score = 455 bits (1171), Expect = e-124, Method: Compositional matrix adjust.
Identities = 290/835 (34%), Positives = 452/835 (54%), Gaps = 104/835 (12%)
Query: 503 LDLSSW--LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
LD+ + LPS++ ++++ RGI LY WQ +CL ++ + QR+NL+Y TS GK+ VAE
Sbjct: 268 LDIGPFYGLPSKVKDLFRQLRGIETLYEWQHDCLMLESLQQRKNLIYSLPTSGGKTLVAE 327
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---D 616
I++L+ L+ K L++LPYV+I EK L LG V Y G++G K
Sbjct: 328 IIILQELLCRQKDVLMILPYVAIVQEKVRGLSSFGIELGFLVEEYAGSKGRFPPIKRRVK 387
Query: 617 TSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGE 676
S+ + TIEK ++LVN ++E R+ ++G++V+DELHM+ +RG +LE L K Y + +
Sbjct: 388 KSLYIATIEKGHALVNSLIETERICDLGLVVVDELHMLGAGSRGAVLEXTLAKNFYTSKK 447
Query: 677 GTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEY 736
QI+GMSAT+ NV + +LQA Y NFRPV L+EY
Sbjct: 448 T-----------------------QIIGMSATLNNVGDLQKFLQAEYYTNNFRPVELKEY 484
Query: 737 IKVGNAIYSKK--------MDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSS 788
IK+ + IY+ + ++NL DPDHI+ L EV+ + +S LIFC +
Sbjct: 485 IKIRDTIYAVDSKTQNGFAFSRLLNFKYSSNLEKADPDHIIALVTEVIPK-YSCLIFCPT 543
Query: 789 RKGCESTARHVSKFLKK-FSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVA 847
+K CE+ A V K+LKK F + + I +I CP VL++T+P G+A
Sbjct: 544 KKNCENVASMVCKYLKKEFRAHKEKEKQDLIKNLKSIGNGTVCP-----VLKQTIPFGIA 598
Query: 848 YHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY 907
YHH+GLT +ER+ +E Y G++ +L T+TLAAGVNLPARRVI R P +G DF+ ++Y
Sbjct: 599 YHHSGLTNDERKAIEEAYSAGILCLLACTATLAAGVNLPARRVILRAPYVGNDFLKKSQY 658
Query: 908 RQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAI 963
+QM GRAGR GID+ GES+LI + ++ + L++ PL +C S E G+ +
Sbjct: 659 KQMTGRAGRAGIDSAGESILIVQEKDKHLVQDLVHS---PLENCYSNLLLELTKGIQSLL 715
Query: 964 LEVVAGGIVQTAEDIHRYVRCT-------LLNSTKPFQDVVKSAQDSL--RWLCHRKFLE 1014
L +V I T +++ ++ CT LL+ K F +++K ++L + L + E
Sbjct: 716 LSLVGLKIAVTHKEVDNFMCCTLLGVQQQLLSKEKSFSEIIKDGLENLIEKGLLKGRISE 775
Query: 1015 WNEDTK-LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV- 1072
+ ++K + TPLG+A + S+ I+ +L + EG VL S LHL+YLSTP ++
Sbjct: 776 KDHNSKSTLTITPLGKATYKGSIDLAYCNILYRELKKGLEGLVLESSLHLLYLSTPYDMT 835
Query: 1073 -EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGK 1131
PDW +Y +F +LSA +Q V + VGV E ++ +MA G +R + H
Sbjct: 836 STCSPDWMIYLRQFHQLSAAEQKVADIVGVPESFITKMASGQTIRKNVD--------HA- 886
Query: 1132 LEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQEN 1191
V RFY+ +L L++ET + V E F ++RG VQ L +
Sbjct: 887 --------------------VVNRFYLTFVLYTLLKETNIWSVSEKFNLSRGYVQNLLNS 926
Query: 1192 AGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKA 1250
A FAS + FCE L ++ + L+ + ++++ V+ E++ L + V +RA+ LY A
Sbjct: 927 AASFASCLLHFCEELEEFWVYKALLTELTKQLTYCVKTELIPLMEVAGVLEARAKQLYNA 986
Query: 1251 GLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
G +T +A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 987 GYKTLAHLAYANPETLVR-------MIEHLSRR----QAKQIISSAKMLLSEKAE 1030
>gi|358372034|dbj|GAA88639.1| DNA-directed DNA polymerase theta [Aspergillus kawachii IFO 4308]
Length = 932
Score = 455 bits (1170), Expect = e-124, Method: Compositional matrix adjust.
Identities = 277/821 (33%), Positives = 429/821 (52%), Gaps = 112/821 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + + G+ +Y WQ CL G+L+ R+LVY A T GKS VA++LML+R+I
Sbjct: 123 LPPGLVANFAAAGLRSIYQWQASCLLAPGLLKGDRHLVYTAPTGGGKSLVADVLMLKRII 182
Query: 568 -STGKMALLVLPYVSICAEKAEHLEVLLE------------------------PLGRHVR 602
+ G+ A+LVLPYV++ EK + L +++ L R +R
Sbjct: 183 ENPGRKAILVLPYVALVQEKLKWLRRIVQDVEKITHDADDQVANEKPYHNRWNKLQRSIR 242
Query: 603 --SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRG 660
YYG + DT +AVCTIEKANSL+N +EE + ++G++V+DELHM+ D++RG
Sbjct: 243 VTGYYGGSRTAASWADTDIAVCTIEKANSLINSAIEECSIGDLGVVVLDELHMLDDEHRG 302
Query: 661 YLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQ 720
YLLEL++TKL QI+GMSAT+ N +A+W+
Sbjct: 303 YLLELMVTKLLLLR-----------------------QKTQIIGMSATLSNTEMLAEWMN 339
Query: 721 AALYETNFRPVPLEEYIKVGNAIYS--------KKMDVVRTILTAANLGGKDPDHI---- 768
AA + + +RP+ +++Y+ NAIY + + ++++ A + PD +
Sbjct: 340 AAYFVSTYRPIQIDDYLVYENAIYPAATSRQLFQTISKLKSMSNATLMECMPPDRVIRPS 399
Query: 769 -------------VELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDS 815
V L + GH L+FC SR C+ A +S+ + + N S
Sbjct: 400 TFRELANPMTNSTVALAIDTADAGHGALVFCGSRHTCQIQAAVISEAMPAPAENTDEL-S 458
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
+ +D+ + LR P+GLDPVLE+TL GV +HHAG+T EERE++ Y +G++R+L A
Sbjct: 459 KRLDLLAD---LRSLPSGLDPVLEKTLVRGVGFHHAGMTAEERELIAQAYDQGVLRILIA 515
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVK 935
T +LAAGVNLPARRVI R+GR+ + RQM GRAGR G D GE+ LIC +++
Sbjct: 516 TCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDEAGETYLICGDSDLQ 575
Query: 936 KIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQD 995
+ LL P + SCL+ +K G+ A+LE +A G+V + I YVRCTLL T +
Sbjct: 576 AVCDLLEAEMPAIESCLAPEKRGLKRALLEAIATGLVSGHDAIKEYVRCTLLYLTVDKRV 635
Query: 996 VVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGF 1055
+L+ L ++ N+D YS+T LG+A S+ PE+ L V ++L RA + F
Sbjct: 636 AYGIMGSALQELATEGLVQLNDDES-YSSTQLGQAVVASAFAPEDGLFVYEELRRALQAF 694
Query: 1056 VLASDLHLVYLSTPINVEVEP--DWELYYERFLELSALDQS---VGNQVGVSEPYLMRMA 1110
V+ D+H+ YL TP+ + DW ++ + +L +LD+S VGVS ++ MA
Sbjct: 695 VMDGDMHIFYLFTPLQAAMATPIDWLIFRD---QLDSLDESGLRALQFVGVSPGFVNTMA 751
Query: 1111 HGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETP 1170
+ L+++T R+ +R Y A L L E P
Sbjct: 752 QSG-----ASLKENTP------------------EQINQARIYRRAYTAFQLRDLSNEVP 788
Query: 1171 VLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEI 1230
+ V +++ RG VQ L + FA+ + FC+R+ W L ++ ++R+ G RA++
Sbjct: 789 LSAVANRYRIPRGAVQTLAQQCHGFAAGIVKFCQRMNWGMLAAVLDHMRDRLEAGARADL 848
Query: 1231 VELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
+E+ + +VKG AR L + G R A+AEA ++V L
Sbjct: 849 LEMAQVTFVKGWTARLLRENGFRNLRALAEADAKDLVPILM 889
>gi|338723392|ref|XP_001494572.3| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Equus caballus]
Length = 1123
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 293/850 (34%), Positives = 453/850 (53%), Gaps = 129/850 (15%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 326 LPSKVRDLYVQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 385
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 386 CRRKDVLMILPYVAIVQEKISGLSSFGVELGFFVEEYAGSKG--RFPPIKRREKKSLYIA 443
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E GR+ +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 444 TIEKGHSLVNSLIETGRIGSLGLVVVDELHMIGEGSRGAILEMTLAKILY-----TSKTT 498
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + ++LQA Y + FRPV L+EY+K+ +A
Sbjct: 499 ------------------QIIGMSATLSNVEDLQEFLQAEYYTSQFRPVELKEYLKINDA 540
Query: 743 IYSKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY + + LG K DPDH+V L EV+ +S L+FC ++K CE+
Sbjct: 541 IYEVDSKAENGMTFSRVLGYKYSDTLKKMDPDHLVALVTEVI-PNYSCLVFCPTKKNCEN 599
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + K L K + + + I L+ G L PVL+ T+P GVAYHH+GL
Sbjct: 600 VAEMICKILSKDCLKHREKEKQ-----EVIQNLKNLSGGSLCPVLKRTIPFGVAYHHSGL 654
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T EER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GR
Sbjct: 655 TSEERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGR 714
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GID+ GES+LI + ++ +K++ L++ PL +C S E G+ L ++
Sbjct: 715 AGRAGIDSTGESILILQEKDKQKVLELISR---PLENCYSHLVQEFTKGIQTLFLSLIGL 771
Query: 970 GIVQTAEDIHRYVRCT-------LLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKL- 1021
I +DI+ ++ T +L K D+ DSLR+L + L+ +DT L
Sbjct: 772 KIATNLDDIYHFMSGTFFGVQQKILLKEKTLWDI---TVDSLRYLTEKGLLQ--KDTILT 826
Query: 1022 --------------------YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDL 1061
+ T LGRA+F ++ ++ DL + EG VL S L
Sbjct: 827 EKGLLQKDTICKSEEEFQYSFQITNLGRASFKGTIDLAYCDVLYRDLKKGLEGLVLESLL 886
Query: 1062 HLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISS 1119
HL+YL+TP ++ + +PDW +Y+ +F +LS +Q+V VGVSE +L + A G ++
Sbjct: 887 HLIYLTTPYDMASQCDPDWMIYFRQFSQLSPAEQNVAALVGVSENFLGKKASGQAIK--- 943
Query: 1120 KLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFK 1179
+ KG + R Y++ +L L++ET + V E F
Sbjct: 944 --KKVDKG------------------------IVNRLYLSFVLFTLLKETNIWSVSEKFN 977
Query: 1180 VARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPY 1238
+ RG VQ L A F+S V FCE L ++ L+ + ++++ V+AE++ L +
Sbjct: 978 MPRGYVQNLLTAAASFSSCVLHFCEELEEFWVYRVLLVELTKKLTYCVKAELIPLMEVTG 1037
Query: 1239 VKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARK 1298
V +RA+ LY AG ++ + +A A+ +++ I RR AK+I + A+
Sbjct: 1038 VLEARAKQLYSAGYKSLMHLANANPEVLIRT-------IDHLSRR----QAKQIVSSAKM 1086
Query: 1299 IVLEKAEEAR 1308
++ EKAE R
Sbjct: 1087 LLHEKAEALR 1096
>gi|74002142|ref|XP_544959.2| PREDICTED: helicase, POLQ-like [Canis lupus familiaris]
Length = 1072
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 285/828 (34%), Positives = 447/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 291 LPTKVRDLYVQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 350
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
+ L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 351 CRRRDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRRGKKSLYIATI 410
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK NSLVN ++E GR+S +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 411 EKGNSLVNSLIETGRISSLGLVVVDELHMIGEGSRGAILEMTLAKVLY-----TSKTT-- 463
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ +AIY
Sbjct: 464 ----------------QIIGMSATLTNVEDLQKFLQAEYYTSQFRPVELKEYLKINDAIY 507
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ HS L+FC ++K CE+ A
Sbjct: 508 EVDSKAENGMTFSRLLNCQYSDTLKKMDPDHLVALATEVI-PNHSCLVFCPTKKNCENVA 566
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ +FL K + + I L+ +G L P+L+ T+P GVAYHH+GLT
Sbjct: 567 EMICRFLSKQYLKHREKEKH-----EVIKNLKNISSGNLCPILKRTIPFGVAYHHSGLTS 621
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 622 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 681
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GID+ GES+LI + ++ ++++ L++ PL +C S E G+ L ++ I
Sbjct: 682 RAGIDSIGESILILQEKDKQQVLELISR---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 738
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKSAQD----SLRWLCHRKFLEWN-------EDTK 1020
+DI+ ++ T + KS D SLR+L + L+ + E
Sbjct: 739 ATNLDDIYHFMCGTFFGVQQKILLQEKSLWDITIESLRYLTEKGLLQKDTIDKPKEEIQY 798
Query: 1021 LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE--VEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ +PDW
Sbjct: 799 SFHITKLGRASFKGTIDLAYCNILYRDLKKGLEGLVLESLLHLIYLTTPYDMASCCDPDW 858
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G P++ K D
Sbjct: 859 MIYFRQFSQLSPAEQNVAALLGVSENFIGKKASGQPIK---KKVDKD------------- 902
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
+ R Y++ +L L++ET + V E F + RG +Q+L A F+S
Sbjct: 903 -------------IVNRLYLSFVLYTLLKETNIWSVSEKFNMPRGYIQSLLTGAASFSSC 949
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++
Sbjct: 950 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYKSLTH 1009
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +++ + S R Q AK++ + A+ ++ EKAE
Sbjct: 1010 LANANPEVLIRTIDHLS--------RHQ---AKQMVSSAKMLLHEKAE 1046
>gi|281346799|gb|EFB22383.1| hypothetical protein PANDA_000253 [Ailuropoda melanoleuca]
Length = 1004
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 284/828 (34%), Positives = 449/828 (54%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 222 LPSKVRDLYVQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 281
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
+ L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 282 CRRRDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRREKKSLYIATI 341
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 342 EKGHSLVNSLIETGRIGSLGLVVVDELHMIGEGSRGAILEMTLAKILY-----TSKAT-- 394
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + ++LQA Y + FRPV L+EY+K+ +AIY
Sbjct: 395 ----------------QIIGMSATLNNVEDLQEFLQAEYYTSQFRPVELKEYLKINDAIY 438
Query: 745 SKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
++ + LG + DPDH+V L EV+ +S L+FC ++K CE+ A
Sbjct: 439 EVDSKAENSMTFSRLLGCQYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPTKKNCENVA 497
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ +G L PVL+ T+P GVAYHH+GLT
Sbjct: 498 EMICKFLSKEYLKHREKEKH-----EVIKNLKNISSGNLCPVLKRTIPFGVAYHHSGLTS 552
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y KG++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 553 DERKLLEEAYSKGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 612
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GID+ GES+LI + ++ ++++ L++ PL +C S E G+ L ++ I
Sbjct: 613 RAGIDSIGESILILQEKDKQQVLELISR---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 669
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTK------- 1020
+DI+ ++ T + KS +SL++L + L+ + K
Sbjct: 670 ATNLDDIYHFMCGTFFGVQQKILLKEKSLWEITVESLKYLTEKGLLQKDTIDKSKEEIQC 729
Query: 1021 LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE--PDW 1078
++ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 730 SFNITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDMASQCVPDW 789
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G ++ K D
Sbjct: 790 MIYFRQFSQLSPAEQNVAALLGVSENFIGKKASGQAIK---KKVDKD------------- 833
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
+ R Y++ +L L++ET + V E F + RG +Q+L A F+S
Sbjct: 834 -------------IVNRLYLSFVLYTLLKETNIWSVSEKFNMPRGYIQSLLTGAASFSSC 880
Query: 1199 VSVFCERLG-WYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RAR LY AG ++ +
Sbjct: 881 VLHFCEELDEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYNAGYKSLMH 940
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +++ I RR AK+I + A+ ++ EKAE
Sbjct: 941 LANANPEVLIRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 977
>gi|301753319|ref|XP_002912509.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Ailuropoda
melanoleuca]
Length = 1105
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 282/830 (33%), Positives = 447/830 (53%), Gaps = 107/830 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 323 LPSKVRDLYVQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 382
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 383 CRRRDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKG--KFPPIKRREKKSLYIA 440
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E GR+ +G++V+DELHM+ + +RG +LE+ L K+ Y +
Sbjct: 441 TIEKGHSLVNSLIETGRIGSLGLVVVDELHMIGEGSRGAILEMTLAKILYTS-------- 492
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + ++LQA Y + FRPV L+EY+K+ +A
Sbjct: 493 ---------------KATQIIGMSATLNNVEDLQEFLQAEYYTSQFRPVELKEYLKINDA 537
Query: 743 IYSKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY ++ + LG + DPDH+V L EV+ +S L+FC ++K CE+
Sbjct: 538 IYEVDSKAENSMTFSRLLGCQYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPTKKNCEN 596
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL K + + I L+ +G L PVL+ T+P GVAYHH+GL
Sbjct: 597 VAEMICKFLSKEYLKHREKEKH-----EVIKNLKNISSGNLCPVLKRTIPFGVAYHHSGL 651
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +ER+++E Y KG++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GR
Sbjct: 652 TSDERKLLEEAYSKGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGR 711
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GID+ GES+LI + ++ ++++ L++ PL +C S E G+ L ++
Sbjct: 712 AGRAGIDSIGESILILQEKDKQQVLELISR---PLENCYSHLVQEFTKGIQTLFLSLIGL 768
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTK----- 1020
I +DI+ ++ T + KS +SL++L + L+ + K
Sbjct: 769 KIATNLDDIYHFMCGTFFGVQQKILLKEKSLWEITVESLKYLTEKGLLQKDTIDKSKEEI 828
Query: 1021 --LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE--P 1076
++ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + P
Sbjct: 829 QCSFNITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDMASQCVP 888
Query: 1077 DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
DW +Y+ +F +LS +Q+V +GVSE ++ + A G ++ K D
Sbjct: 889 DWMIYFRQFSQLSPAEQNVAALLGVSENFIGKKASGQAIK---KKVDKD----------- 934
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
+ R Y++ +L L++ET + V E F + RG +Q+L A F+
Sbjct: 935 ---------------IVNRLYLSFVLYTLLKETNIWSVSEKFNMPRGYIQSLLTGAASFS 979
Query: 1197 SMVSVFCERLG-WYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTP 1255
S V FCE L ++ L+ + ++++ V+AE++ L + V RAR LY AG ++
Sbjct: 980 SCVLHFCEELDEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYNAGYKSL 1039
Query: 1256 LAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+ +A A+ +++ I RR AK+I + A+ ++ EKAE
Sbjct: 1040 MHLANANPEVLIRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1078
>gi|291401472|ref|XP_002717082.1| PREDICTED: DNA helicase HEL308 [Oryctolagus cuniculus]
Length = 1054
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 291/830 (35%), Positives = 446/830 (53%), Gaps = 107/830 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 272 LPSKVRDLYVRVKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 331
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
L++LPYV+I EK L LG V Y G++G P + S+ V
Sbjct: 332 CRRNDVLMILPYVAIVQEKITGLSSFGIELGFFVEEYAGSKG--RFPPIKRREKKSLYVA 389
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E GR+S +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 390 TIEKGHSLVNSLIETGRISSLGLVVVDELHMIGEGSRGAILEMTLAKILY-----TSKTT 444
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + ++LQA Y + FRPV L+EY+K+ +
Sbjct: 445 ------------------QIIGMSATLSNVEDLQEFLQAEYYTSQFRPVELKEYLKLNDR 486
Query: 743 IYS------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY M R + + L DPDH+V L EV+ +S L+FC ++K CE+
Sbjct: 487 IYEVDSKAENGMTFSRVLNYKYSDTLKKMDPDHLVALVTEVIP-SYSCLVFCPTKKNCEN 545
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL K + + + I L+ +G L PVL+ T+P GVAYHH+GL
Sbjct: 546 VAEMICKFLSKEYLKHREKEKD-----EVIKNLKSISSGTLCPVLKHTIPFGVAYHHSGL 600
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T EER ++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GR
Sbjct: 601 TSEERRLLEEAYSSGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGR 660
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GIDT GES+LI + ++ +++ L+ S PP +C S E G+ L ++
Sbjct: 661 AGRAGIDTIGESILILQEKDKQQVSELI--SRPP-ENCYSHLVQEFTKGIQSLFLSLIGL 717
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPF----QDVVKSAQDSLRWLCHRKFLEW----NEDTKL 1021
I DIH ++ T + + + + +SLR L + L+ N D +
Sbjct: 718 KIATNLGDIHHFMNGTFFGVQQKILLKEKSLWEVTVESLRHLTEKGLLQKDTVNNSDEEC 777
Query: 1022 ---YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEP 1076
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + +P
Sbjct: 778 RCDFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESFLHLIYLTTPYDLVPQYDP 837
Query: 1077 DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
DW +Y+ +F +LS +QSV +++GVSE ++ + A G +R K D
Sbjct: 838 DWMVYFRQFSQLSPAEQSVASRLGVSESFIGKKASGQAIR---KKVDKN----------- 883
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
+ R Y++ +L L++ET V V E F + RG +Q L A F+
Sbjct: 884 ---------------IVNRLYLSFVLYTLLKETNVWSVSEKFNMPRGYIQNLLSGAASFS 928
Query: 1197 SMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTP 1255
S V FCE L ++ L+ + ++++ V+AE++ L + V+ RA+ LY AG ++
Sbjct: 929 SCVLHFCEELEEFWVYRALLVELIKKLTYCVKAELIPLMEVTGVQEGRAKQLYNAGYKSL 988
Query: 1256 LAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A +++ I RR AK+I + A+ ++ EKAE
Sbjct: 989 THLANADPEVLIRT-------IDHLSRR----QAKQIVSSAKMLLQEKAE 1027
>gi|241747887|ref|XP_002405662.1| DNA polymerase theta, putative [Ixodes scapularis]
gi|215505916|gb|EEC15410.1| DNA polymerase theta, putative [Ixodes scapularis]
Length = 704
Score = 449 bits (1156), Expect = e-123, Method: Composition-based stats.
Identities = 288/772 (37%), Positives = 408/772 (52%), Gaps = 92/772 (11%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQR-RNLVYCASTSAGKSFVAEILMLRRLI 567
LP+++ + Y++RG+ +++PWQ ECL VL R+LVY A TSAGKS VAE+LML+R++
Sbjct: 3 LPADMVAAYERRGLCRMFPWQRECLLT--VLHSGRSLVYSAPTSAGKSLVAELLMLKRVL 60
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKA 627
T AL+VLP++S+ EK L+ + G V + G Q VAVCTIEKA
Sbjct: 61 ETHTKALMVLPFISLAREKLNALQEV--ACGIRVGGFMGQQRPPGGLASLDVAVCTIEKA 118
Query: 628 NSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENS 687
N LVNRML+EG L+++G +V+DE+H+V D NRGYLLEL+L KL Y A
Sbjct: 119 NGLVNRMLQEGTLAQLGTVVVDEVHLVGDPNRGYLLELMLAKLAYMA------------- 165
Query: 688 GTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKK 747
G+Q+V MSA + N+ A+A WL A LY RPVPL + K +++ K
Sbjct: 166 ---------RSGVQVVAMSACLGNLEALARWLDAELYRCTERPVPLRQLFKETVSVFLHK 216
Query: 748 MDV-------------VRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
V +R + +DP+ +++LC E EGH+VL+FC +R CE+
Sbjct: 217 EVVGQYNADELWEGPPLRLVKGPGPPLPEDPEGLLQLCLETWLEGHAVLLFCPTRAWCEA 276
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
A +++ + +HS + + L PAGLDP L L VA+HHAGLT
Sbjct: 277 LALALARGARLLLARLHSG----LQLAELGQQLAATPAGLDPALGRCLRCAVAFHHAGLT 332
Query: 855 VEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA 914
+ER+V+E +R+G++R L ATSTL++GVNLPARRV+ R P +D YRQMAGRA
Sbjct: 333 TDERDVIEEAFRRGVLRALVATSTLSSGVNLPARRVVIRTPMFHGAPLDVMAYRQMAGRA 392
Query: 915 GRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS---EDKNGMTHAILEVVAGGI 971
GR G+DT GES+L+CK E L PP+ S L+ + A+LEV +
Sbjct: 393 GRLGMDTHGESVLVCKTSERGLAERLCGAEPPPIGSSLAGRGAATPALKRALLEVSQTAV 452
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAA 1031
+ V C L + K D + + E Y T LG A
Sbjct: 453 KVGSRLWVIRVGCLLFDLPHILALFFKCVWDLVA--------DGGEGGPCYHPTQLGLAV 504
Query: 1032 FGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE-PDWELYYERFLELSA 1090
SSL P+E+L VL DL +AR VL ++LHLVYL TP+++ + DW Y + LS
Sbjct: 505 LASSLSPDEALCVLADLEQARRCLVLENELHLVYLVTPVHLSSQVVDWGRYQALWEGLSP 564
Query: 1091 LDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTL 1150
Q V Q GV+E L G R+++
Sbjct: 565 DRQRVAQQAGVTEASLAARGRG---------REASH------------------------ 591
Query: 1151 RVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYD 1210
+R VAL L L+ E P+ +V + + +G++Q+LQ A FA MV FCE+LGW+
Sbjct: 592 ---RRLLVALALEELLGERPLAQVAPRYGLPKGLLQSLQHGAATFAGMVCAFCEQLGWHG 648
Query: 1211 LEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEAS 1262
L L+++ Q+R+ FGVR E+VEL +P + G AR L+ G P +A+A+
Sbjct: 649 LRLLVSQLQSRLHFGVRPELVELLRLPCLDGPCARLLHDCGFTEPRCLAQAT 700
>gi|344284980|ref|XP_003414242.1| PREDICTED: helicase POLQ [Loxodonta africana]
Length = 1121
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 296/838 (35%), Positives = 446/838 (53%), Gaps = 108/838 (12%)
Query: 501 DCLDLSSWLPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
DC S LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAE
Sbjct: 332 DCGPFYS-LPSKVRDLYVQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAE 390
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP----- 614
ILML+ L+ K L++LPYV+I EK L LG V Y G++G P
Sbjct: 391 ILMLQELLCRRKDVLMILPYVAIVQEKISGLSTFGMELGFFVEEYAGSKG--RFPPIKRR 448
Query: 615 KDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAA 674
+ S+ + TIEK +SLVN ++E R+S +G++V+DELHM+ + +RG +LE+ L K+ Y
Sbjct: 449 EKKSLYIATIEKGHSLVNSLIETERISNLGLVVVDELHMIGEGSRGAILEMTLAKILYI- 507
Query: 675 GEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLE 734
N T QI+GMSAT+ NV + ++LQA Y FRPV L+
Sbjct: 508 -----------NKTT-----------QIIGMSATLNNVEDLQEFLQAEYYTNQFRPVELK 545
Query: 735 EYIKVGNAIYSKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFC 786
EY+K+ + IY I + L K DPD ++ L EV+ +S L+FC
Sbjct: 546 EYLKINDEIYEVDSKAENGITFSRLLNYKYSDSLKKMDPDRLIALVTEVIP-NYSCLLFC 604
Query: 787 SSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSG 845
++K CE+ A + KFL K + H + ++ I L+ G L PVL+ T+P G
Sbjct: 605 PTKKNCENVAEMICKFLSKGYLK-HKEEEKY----EVIKNLKNVSGGSLCPVLKRTIPFG 659
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGT 905
VAYHH+GLT EER+++E Y G++ + T TSTLAAGVNLPARRVI R P + + F+
Sbjct: 660 VAYHHSGLTSEERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKKFLKRN 719
Query: 906 RYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTH 961
+Y+QM GRAGR GIDT GES+LI + ++ ++++ L+N PL +C S E G+
Sbjct: 720 QYKQMIGRAGRAGIDTVGESILILQEKDKQQVLELINS---PLENCYSHLVQEFTKGIQA 776
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWN- 1016
L +V I DI+ ++ T L + KS +SLR+L + L+ +
Sbjct: 777 LFLSLVGLKIATNLNDIYHFMSGTFLGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDT 836
Query: 1017 ----EDTKLYS--TTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI 1070
E+ YS T LGRA+F + I+ DL + EG VL S LHLVYL+TP
Sbjct: 837 ICKSEEEVEYSFHITKLGRASFKGMIDVAYCDILYRDLKKGLEGLVLESLLHLVYLTTPY 896
Query: 1071 NV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGL 1128
++ + +PDW +Y+ +F +LS +Q V VGVSE ++ + A G ++ K D
Sbjct: 897 DMIFQCDPDWMIYFRQFSQLSPAEQKVAALVGVSESFIGKKASGQAIK---KKVDKD--- 950
Query: 1129 HGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQAL 1188
+ R Y++ IL+ L++ET + V E + + RG +Q L
Sbjct: 951 -----------------------IVNRLYLSFILNTLLKETNIWSVSEKYNMPRGYIQNL 987
Query: 1189 QENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARAL 1247
A F+S V FCE L ++ L+ + ++++ V+AE++ L + V RA+ L
Sbjct: 988 LTGAASFSSCVLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQL 1047
Query: 1248 YKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
Y AG ++ +A A+ +++ I RR AK+I + A+ ++LEKAE
Sbjct: 1048 YNAGYKSLTHLANANPEVLIRT-------IDHLSRR----QAKQIVSSAKMLLLEKAE 1094
>gi|294948800|ref|XP_002785901.1| dna polymerase theta, putative [Perkinsus marinus ATCC 50983]
gi|239900009|gb|EER17697.1| dna polymerase theta, putative [Perkinsus marinus ATCC 50983]
Length = 1712
Score = 449 bits (1155), Expect = e-122, Method: Compositional matrix adjust.
Identities = 298/808 (36%), Positives = 424/808 (52%), Gaps = 87/808 (10%)
Query: 503 LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEI 560
+D+ S+ L + S+Y+ RG+++LY WQ ECL + G+L RNL+YCA TS GK+ V+EI
Sbjct: 1 MDIGSFGLKESLVSVYRTRGVNQLYQWQSECLSLPGILDGHRNLIYCAPTSGGKTLVSEI 60
Query: 561 LMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDT-SV 619
+MLRRL G+ AL VLPY+S+ +EK +L+ L V+++YG G L + +
Sbjct: 61 VMLRRLAGDGRRALFVLPYISVVSEKEAYLQSLCRSAQYKVQAFYGGSSGNFLAMERYDI 120
Query: 620 AVCTIEKANSLVNRMLEE------GRLSEI-GIIVIDELHMVADQNRGYLLELLLTKLRY 672
AVCTIEKANSLVN +LE+ LS + G +V+DELH++ D RGYLLE+L+ K+RY
Sbjct: 121 AVCTIEKANSLVNALLEQPGVDPGSELSRLLGCLVLDELHLLGDSQRGYLLEVLVAKVRY 180
Query: 673 AAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVP 732
A QIVGMSAT+PNV+ VA WL A LY T+FRPVP
Sbjct: 181 FAPT-----------------------CQIVGMSATLPNVSEVAAWLDARLYVTDFRPVP 217
Query: 733 LEEYIKVGNAIYSKKMDVV--RTILTAANL-GGKDPDHIVELCDEVVQEGHSVLIFCSSR 789
L EY+ +++ D V R + A NL D D + E + G+SVL+FC S+
Sbjct: 218 LYEYVVCKRTVFTCDEDRVPIRALEDANNLMPPTDTDGFMLAVWEALSIGNSVLVFCPSK 277
Query: 790 KGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCP----AGLDPVLEETLPSG 845
CE ++K L S S + + + L C GLD L + L G
Sbjct: 278 MKCEVACSLLTKSLPWRSAPPPSQEVHHHRLQLRAE-LELCSCNTGTGLDKNLADGLLVG 336
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGT 905
+A+HH+GLT EER++VE YR G + L TSTLAAGVNLPA+RV+FR P I +F+D T
Sbjct: 337 IAFHHSGLTTEERDIVERGYRSGAITCLACTSTLAAGVNLPAQRVVFRTPFIATEFLDTT 396
Query: 906 RYRQMAGRAGRTGIDT-KGESMLICKPE-EVKKIMGLLNESCPPLHSCLSEDKNGMTHAI 963
RYRQMAGRAGR+G + GES +IC E E +++ + + PPL S L ++ G+ +
Sbjct: 397 RYRQMAGRAGRSGHSSASGESYVICSNEVEKRRVTSMAVATLPPLRSALGQNCVGLQRLL 456
Query: 964 LEVVAGGIVQTAEDIHRYVRCTLLNST-----------KPFQDVVKSAQDSLRWLCHRKF 1012
LEV+A + I R R T L+ D + +++L
Sbjct: 457 LEVMATAGQMRDDQIMRLARSTFLDRQLEAPGNEKKRRNSVADDFPAVHAGMKYLLSSGM 516
Query: 1013 LEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRARE--GFVLASDLHLVYLSTPI 1070
+ +N D++LY T LGRA S L E +++ ++L R R G L DLHLVYL+TP
Sbjct: 517 VYFNRDSQLYMATHLGRAVCASGLSCEAGIVLWEELKRLRNETGLCLEGDLHLVYLATPW 576
Query: 1071 NVEVEP---DWELYYERF-LELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTK 1126
V DW Y +L+ Q+ +G+S MA I +L + K
Sbjct: 577 EASVSESLIDWNTYAAVVESDLNRQQQASLEVIGIS------MAKIQQASIQGRLSQAVK 630
Query: 1127 GLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETF--KVARGM 1184
D R +FY L++ L+ E P+ +V F K+ RG+
Sbjct: 631 D-----------------RDPDGCRRVVKFYSTLLIWDLMCERPIEQVIHRFGTKIGRGL 673
Query: 1185 VQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGV--RAEIVELTTIPYVKGS 1242
+Q+L +A F S ++VFC +L W LE + F R+S R E++ L+ IP + +
Sbjct: 674 LQSLISSASAFTSCIAVFCGKLRWRILESVFDTFAGRLSSMCHRRPELLALSEIPKLSPA 733
Query: 1243 RARALYKAGLRTPLAIAEASISEIVKAL 1270
AR LY AG +P +A A+ E+ L
Sbjct: 734 WARQLYDAGFVSPKMVAGATPQELQAVL 761
Score = 147 bits (371), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 147/272 (54%), Gaps = 33/272 (12%)
Query: 1919 INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD----------VF 1968
I RD F+ + + +LL+ DY Q+E RL+AHF D LI L ++P GD +F
Sbjct: 1450 IALRDAFV-APKGRLLLSVDYCQLEARLLAHFCGDQRLITLFNQPDGDYNSTGSPTYDIF 1508
Query: 1969 TMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSS 2028
IA+ W ++ + V ER+ K+L+YG++YGMG +LS ++ + E + + F +
Sbjct: 1509 VHIASTWLSKALNEVSDMERNGIKQLVYGVIYGMGARSLSREMGVTLAEGEALMSKFDNE 1568
Query: 2029 FPGVASWLHVAVSSCHQKGY-VESLKGRKRFLSKIKFGNN-KEKSKAQRQAVNSICQGSA 2086
FP V W + ++G V S+ GR R L+ + G +E+++AQRQAVN+ CQ SA
Sbjct: 1569 FPRVREWTRSVIHGATREGASVPSILGRPRHLAGLGGGGTAQERARAQRQAVNTACQASA 1628
Query: 2087 ADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR--CRLLLQVHDELVLEVDPSVIKE 2144
ADI+K A + + + A + GR +LLQ+HDEL+LEVD I+
Sbjct: 1629 ADIMKAATLEVARRL------------AAMRDENGRPPAEILLQIHDELLLEVDEDRIEP 1676
Query: 2145 AVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
V V M +A VPL V++QV WG +
Sbjct: 1677 VVDAVVDAMVTA----VPLTVRLQV--KWGRI 1702
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
+D +++W+ P+D S+ P+LEK VK+ A +R ++
Sbjct: 1070 VDPHLMAWLRNPED--STGPSLEKYVKQL---SAPHYLDRD---------------LKQC 1109
Query: 1713 AQTRALCSVLWKLLVSEE-LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK- 1770
ALC+ L + LV L+E L+ +E P +L DME+ G+ V + +
Sbjct: 1110 LAIYALCTELGRGLVQHSGLLELLVTVEAPTAALLVDMEVTGLMVTPSYWFHRQGKHARY 1169
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG------HNKGKQHPSTDKHC 1824
K++ LE G +L A D++ ++ L +P+PEG G + + D+
Sbjct: 1170 KMQALEVAVREAVGRYVALGNAEDVSKAIFDDLNVPVPEGLRPRKVKKNGHKVYAVDQKT 1229
Query: 1825 L---DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTAT 1881
L D H + I EHR L+ +L S ++ + +H + QT TAT
Sbjct: 1230 LMQLDPPDRCHDLFDWIMEHRRLSHVL-----SKHAVIDRHVLHDGLRVHTTFTQTGTAT 1284
Query: 1882 GRLSMEEPNLQCVEHMVE 1899
GRL +PNL VE+ E
Sbjct: 1285 GRLKSTDPNLLTVENAFE 1302
>gi|380789743|gb|AFE66747.1| helicase POLQ-like [Macaca mulatta]
gi|383412853|gb|AFH29640.1| helicase POLQ-like [Macaca mulatta]
Length = 1101
Score = 449 bits (1154), Expect = e-122, Method: Compositional matrix adjust.
Identities = 291/828 (35%), Positives = 439/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGVELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSRTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EIDSKAENGMTFSRLLNYKYSETLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITR---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL------ 1021
+DI+ ++ T + KS +SLR+L + L+ + K
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDTICKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQSNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE +L + A G +R K D
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFLGKKASGQAIR---KKVDKD------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ +L L++ET + V E F + RG +Q L A F+S
Sbjct: 931 -------------VVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RAR LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ ++K I RR AK+I A+ ++ EKAE
Sbjct: 1038 LANANPEVLIKT-------IDHLSRR----QAKQIIASAKMLLHEKAE 1074
>gi|109074228|ref|XP_001104832.1| PREDICTED: helicase, POLQ-like [Macaca mulatta]
Length = 1101
Score = 449 bits (1154), Expect = e-122, Method: Compositional matrix adjust.
Identities = 291/828 (35%), Positives = 439/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGVELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSRTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EIDSKAENGMTFSRLLNYKYSETLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITR---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL------ 1021
+DI+ ++ T + KS +SLR+L + L+ + K
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDTICKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQSNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE +L + A G +R K D
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFLGKKASGQAIR---KKVDKD------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ +L L++ET + V E F + RG +Q L A F+S
Sbjct: 931 -------------VVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RAR LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ ++K I RR AK+I A+ ++ EKAE
Sbjct: 1038 LANANPEVLIKT-------IDHLSRR----QAKQIIASAKMLLHEKAE 1074
>gi|355569241|gb|EHH25383.1| Helicase POLQ-like protein [Macaca mulatta]
Length = 1101
Score = 448 bits (1153), Expect = e-122, Method: Compositional matrix adjust.
Identities = 291/828 (35%), Positives = 439/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGVELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSRTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EIDSKAENGMTFSRLLNYKYSETLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITR---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL------ 1021
+DI+ ++ T + KS +SLR+L + L+ + K
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITIESLRYLTEKGLLQKDTICKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQSNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE +L + A G +R K D
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFLGKKASGQAIR---KKVDKD------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ +L L++ET + V E F + RG +Q L A F+S
Sbjct: 931 -------------VVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RAR LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ ++K I RR AK+I A+ ++ EKAE
Sbjct: 1038 LANANPEVLIKT-------IDHLSRR----QAKQIIASAKMLLHEKAE 1074
>gi|402869339|ref|XP_003898720.1| PREDICTED: helicase POLQ-like [Papio anubis]
Length = 1101
Score = 448 bits (1153), Expect = e-122, Method: Compositional matrix adjust.
Identities = 291/828 (35%), Positives = 439/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGVELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSRTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EIDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++I+ L+ PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQILELITR---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL------ 1021
+DI+ ++ T + KS +SLR+L + L+ + K
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDTICKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQSNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE +L + A G +R K D
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFLGKKASGQAIR---KKVDKD------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
+ R Y++ +L L++ET + V E F + RG +Q L A F+S
Sbjct: 931 -------------IVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RAR LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ ++K I RR AK+I A+ ++ EKAE
Sbjct: 1038 LANANPEVLIKT-------IDHLSRR----QAKQIIASAKMLLHEKAE 1074
>gi|355749273|gb|EHH53672.1| Helicase POLQ-like protein [Macaca fascicularis]
Length = 1101
Score = 448 bits (1153), Expect = e-122, Method: Compositional matrix adjust.
Identities = 291/828 (35%), Positives = 439/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGVELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSRTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EIDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITR---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL------ 1021
+DI+ ++ T + KS +SLR+L + L+ + K
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDTICKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQSNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE +L + A G +R K D
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFLGKKASGQAIR---KKVDKD------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ +L L++ET + V E F + RG +Q L A F+S
Sbjct: 931 -------------VVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RAR LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ ++K I RR AK+I A+ ++ EKAE
Sbjct: 1038 LANANPEVLIKT-------IDHLSRR----QAKQIIASAKMLLHEKAE 1074
>gi|297673894|ref|XP_002814981.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Pongo abelii]
Length = 1100
Score = 448 bits (1152), Expect = e-122, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 443/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 318 LPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 377
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 378 CCQKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 437
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 438 EKGHSLVNSLIETGRIGSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 490
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 491 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 534
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 535 EVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 593
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 594 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 648
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 649 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 708
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 709 RAGIDTIGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 765
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWN------EDTKL 1021
+DI+ ++ T + KS +SLR+L + L+ + E+ +
Sbjct: 766 ATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 825
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 826 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 885
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G +R K D
Sbjct: 886 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQAIR---KKVDKD------------- 929
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
+ R Y++ +L L++ET + V E F + RG +Q L A F+S
Sbjct: 930 -------------IVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSC 976
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 977 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1036
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1037 LANANPEVLVRT-------IDHLSRR----QAKRIVSSAKMLLHEKAE 1073
>gi|449269167|gb|EMC79970.1| Helicase POLQ-like protein, partial [Columba livia]
Length = 1000
Score = 447 bits (1151), Expect = e-122, Method: Compositional matrix adjust.
Identities = 289/827 (34%), Positives = 446/827 (53%), Gaps = 102/827 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ + K+ RGI LY WQ CL ++ + QR+NL+Y TS GK+ VAEI++L+ L+
Sbjct: 226 LPSKVKDLLKQFRGIETLYEWQHNCLMLESLQQRKNLIYSLPTSGGKTLVAEIIILQELL 285
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 286 CRQKNVLMILPYVAIVQEKVRGLSSFGIELGFLVEEYAGSKGRFPPIKRRIKKSLYIATI 345
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK ++LVN ++E R+ ++G++V+DELHM+ + +RG LE+ L K+ Y +
Sbjct: 346 EKGHALVNSLIETERIDDLGLVVVDELHMLGEGSRGATLEITLAKILYTS---------- 395
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y NFRPV L+EY+K+ + IY
Sbjct: 396 -------------KNTQIIGMSATLNNVEDLQKFLQAEYYTNNFRPVKLKEYVKIRDTIY 442
Query: 745 -----SKKMDVVRTILT---AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
++K +L ++NL DPDHI+ L EV+ + +S LIFC ++K CE+ A
Sbjct: 443 AVDSKTEKGFTFSRLLNFKYSSNLQKADPDHIIALVTEVIPK-YSCLIFCPTKKNCENVA 501
Query: 797 RHVSKFLKK-FSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTV 855
V K+L+K F + + I I CP VL++T+P GVAYHH+GLT
Sbjct: 502 SMVCKYLQKEFRAHREKEKQDLIKDLKNIGNGSVCP-----VLKQTIPFGVAYHHSGLTN 556
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+ +E Y G++ +L T+TLAAGVNLPARRVI R P + DF+ +Y+QM GRAG
Sbjct: 557 DERKSIEEAYSAGILCLLACTATLAAGVNLPARRVILRAPYVASDFLKKNQYKQMIGRAG 616
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GID GES+LI + ++ + L++ PL +C S E GM +L +V I
Sbjct: 617 RAGIDDAGESILIVQEKDRHLVQDLVS---SPLENCYSNLLLELTKGMQSLLLSLVGLKI 673
Query: 972 VQTAEDIHRY-------VRCTLLNSTKPFQDVVKSAQDSL--RWLCHRKFLEWNEDTKL- 1021
T E++ + V+ LL+ K +++K ++L + L + E + ++K
Sbjct: 674 AVTHEEVSNFMCSTLLGVQQQLLSKDKSLSEIIKDGLENLIQKGLLRGRTSEKDHNSKCT 733
Query: 1022 YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWE 1079
+ TPLG+A + S+ ++ +L + EG +L S+LHL+YL+TP ++ PDW
Sbjct: 734 LTVTPLGKATYKGSIDLAYCNLLYRELKKGLEGLILESNLHLLYLATPYDMTSNCSPDWM 793
Query: 1080 LYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGIT 1139
+Y ++F +LSA +Q V + VGV E ++++ A G +R
Sbjct: 794 IYLKQFNQLSAAEQKVADVVGVPESFIIKKASGQAIR----------------------- 830
Query: 1140 SNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMV 1199
NM S V R Y+ +L L++ET V V E F ++RG VQ L +A FAS V
Sbjct: 831 -KNMDS-----AVVNRLYLTFVLYALLKETNVWSVSEKFNMSRGYVQNLLSSAASFASCV 884
Query: 1200 SVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAI 1258
FCE L ++ + L+ + ++++ V+ E++ L + V +RA+ LY AG +T +
Sbjct: 885 LHFCEELEEFWVYKALLTELTKQLTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHL 944
Query: 1259 AEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
A A+ +VK I RR AK+I + A+ ++ EKAE
Sbjct: 945 ANANPEILVKV-------IEHLSRR----QAKQIISSAKMLLSEKAE 980
>gi|261188418|ref|XP_002620624.1| DNA-directed DNA polymerase theta [Ajellomyces dermatitidis SLH14081]
gi|239593224|gb|EEQ75805.1| DNA-directed DNA polymerase theta [Ajellomyces dermatitidis SLH14081]
Length = 935
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/817 (32%), Positives = 422/817 (51%), Gaps = 112/817 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ + + G++ +YPWQ CL G L +NLVY A T GKS VA++LML+R+I
Sbjct: 133 LPPQLVTNFASLGVNCIYPWQASCLLGRGHLTAEKNLVYSAPTGGGKSLVADVLMLKRVI 192
Query: 568 S-TGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRS----------------------- 603
K A+LVLPYV++ EK + L ++E + +++ +
Sbjct: 193 DDPSKKAILVLPYVALVQEKLKWLRRVVEGVTKNIDTPTTVDEASSVPHWRQPQSSIRVT 252
Query: 604 -YYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
++G + DT +AVCTIEKANSLVN +EE +++++G++V+DELHM+ D++RGYL
Sbjct: 253 GFFGGSKTRATWADTDIAVCTIEKANSLVNTAIEECKINDLGVVVLDELHMLDDEHRGYL 312
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAA 722
+E+++TKL K D +QIVGMSAT+ N +A WL+A
Sbjct: 313 IEIMVTKLMLL-------------------KQD----IQIVGMSATLSNTEVLAKWLRAN 349
Query: 723 LYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTILTAANLGGKDPDH------------- 767
Y + +RP+P+ E++ N IY + + RT A L DP
Sbjct: 350 YYISKYRPIPIREHLVYNNEIYPATSSKEFFRT---ATQLNKPDPSQRNSLACRIIDRST 406
Query: 768 -----------IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSE 816
+V L E G+ L+FC SR+ C+S A +S+ + ++
Sbjct: 407 YKELATSTANAMVSLALETALSGYGALVFCGSRQACQSNAILISQAMPDETMLDKDLSER 466
Query: 817 FIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTAT 876
+D+ + + +L P G+DPV ++T+ GVA+HHAGLT EER+++ Y KG++RVL AT
Sbjct: 467 RMDLIAGLQSL---PCGIDPVFQKTVIKGVAFHHAGLTTEERDLIAEAYDKGILRVLVAT 523
Query: 877 STLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKK 936
+LAAG+NLPARRVI R+GRD + RQM GRAGR G D GE+ L+C+ ++++
Sbjct: 524 CSLAAGINLPARRVILCGARMGRDLVGPAMLRQMRGRAGRKGKDEVGETYLLCQKDDLEA 583
Query: 937 IMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDV 996
+ LL P + S L+ +K G+ A+LE +A +V + E ++ YV CTLL ++
Sbjct: 584 VAELLEAEMPAIASGLTPEKRGIKRALLEAIATRLVSSRETVNEYVTCTLLYQNMETDEL 643
Query: 997 VKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFV 1056
+L+ L ++ +D + + T LG+A SSL PE+ + + D+L RA + FV
Sbjct: 644 FSMVDSTLKELVDHGLVDLKQD-EYFEPTQLGQAVVSSSLSPEDGIFIHDELKRALKSFV 702
Query: 1057 LASDLHLVYLSTPI--NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAP 1114
+ ++H+ Y+ P+ + + DW ++ ++ L VGV ++ +MA
Sbjct: 703 MDGEMHIFYMFAPLQNSAPADIDWSIFRDQMNNLDESGIRALQLVGVEPAFVNKMAQ--- 759
Query: 1115 MRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEV 1174
S + D R+ R Y A L L E P+ +
Sbjct: 760 -------------------------SRTRIKDETLARIYHRAYTAFQLRDLSNEVPISTI 794
Query: 1175 CETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELT 1234
+ + RG VQ L + FA+ + FC+R+GW L ++ ++R+ G RA+++E+
Sbjct: 795 ARKYNIPRGNVQTLTQICHGFAAGIVKFCQRMGWDMLAVVLDHMRDRLQAGARADLLEMA 854
Query: 1235 TIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
+ YVK AR L++ G +T A+AEA +++ L
Sbjct: 855 QVAYVKSRTARLLWENGFKTLRALAEADPKDLLPVLM 891
>gi|410957307|ref|XP_003985271.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Felis catus]
Length = 1104
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 282/830 (33%), Positives = 448/830 (53%), Gaps = 107/830 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 323 LPSKVRDLYVQFKGIGKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 382
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 383 CRRRDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKG--KFPPIKRREKKSLYIA 440
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E GR+ +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 441 TIEKGHSLVNSLIETGRIGSLGLVVVDELHMIGEGSRGAILEMTLAKVLY-----TSKTT 495
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + ++LQA Y + FRPV L+EY+K+ +A
Sbjct: 496 ------------------QIIGMSATLNNVEDLQEFLQAEYYTSQFRPVELKEYLKINDA 537
Query: 743 IYS------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY M R + + L DPDH+V L EV+ +S L+FC ++K CE+
Sbjct: 538 IYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-SYSCLVFCPTKKNCEN 596
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL K + + I L+ +G L PVL+ T+P GVAYHH+GL
Sbjct: 597 VAEMICKFLSKEYLKHREEEKH-----EVIKNLKNVSSGNLCPVLKRTIPFGVAYHHSGL 651
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GR
Sbjct: 652 TSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGR 711
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GID+ GES+LI + ++ ++++ L++ PL +C S E G+ L ++
Sbjct: 712 AGRAGIDSFGESILILQEKDKQQVLELISR---PLENCYSHLVQEFTKGIQTLFLSLIGL 768
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTK----- 1020
I +D++ ++ T + KS +SLR+L + L+ + K
Sbjct: 769 KIATNLDDVYHFMNGTFFGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDTTDKSEEEF 828
Query: 1021 --LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEP 1076
+ T LGRA+F ++ ++ DL + EG VL S LHL+YL+TP ++ + +P
Sbjct: 829 QHSFHITKLGRASFKGTIDLAYCDVLYRDLKKGLEGLVLESLLHLIYLTTPYDMASQCDP 888
Query: 1077 DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
DW +Y+ +F +LS +Q+V +GVSE ++ + A G ++ K D
Sbjct: 889 DWMIYFRQFSQLSPAEQNVAALLGVSENFIGKKASGQAIK---KKVDKD----------- 934
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
+ R Y++ +L L++ET + V E F + RG +Q+L A F+
Sbjct: 935 ---------------IVNRLYLSFVLYALLKETNIWSVSEKFNMPRGYIQSLLTGAATFS 979
Query: 1197 SMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTP 1255
S V FCE L ++ + L+ + ++++ V+AE++ L + V RA+ LY AG ++
Sbjct: 980 SCVLHFCEELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYKSL 1039
Query: 1256 LAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +++ I RR AK+I + A+ ++ EKAE
Sbjct: 1040 THLANANPEVLIRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1078
>gi|425773040|gb|EKV11415.1| DNA-directed DNA polymerase theta, putative [Penicillium digitatum
PHI26]
gi|425782185|gb|EKV20109.1| DNA-directed DNA polymerase theta, putative [Penicillium digitatum
Pd1]
Length = 940
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 270/834 (32%), Positives = 424/834 (50%), Gaps = 112/834 (13%)
Query: 493 PSSSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTS 551
PSS L + LP + + + G+ +YPWQ CL G+L R+LVY A T
Sbjct: 115 PSSQNPLLSLSNPKYGLPPALTTNFATLGVRNIYPWQASCLLARGLLSGERHLVYTAPTG 174
Query: 552 AGKSFVAEILMLRRLI-STGKMALLVLPYVSICAEKAEHLEVLLEPLGRH---------- 600
GKS VA++L+L+R+I + G+ ALLVLPYV++ EK + + +++ + ++
Sbjct: 175 GGKSLVADVLLLKRIIENPGRKALLVLPYVALVQEKLKWMRRIVQDVEKNMPDDDGNDSK 234
Query: 601 --------------VRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGII 646
V ++G + DT +AVCTIEKANSL+N +EE + ++G++
Sbjct: 235 FPRRRWKKLQKNIRVTGFFGGSRTTTTWADTDIAVCTIEKANSLINSAIEECSIGDLGVV 294
Query: 647 VIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMS 706
V+DELHM+ D++RGYLLEL++TKL + +QIVGMS
Sbjct: 295 VLDELHMLDDEHRGYLLELMVTKLLLLQQD-----------------------IQIVGMS 331
Query: 707 ATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY----SKKMDVVRTILTAA---- 758
AT+ N +A W+ A + + +RP+P++EY+ N IY S+++ + LTAA
Sbjct: 332 ATLSNTEMLAQWMNAKFHISTYRPIPIDEYLVYENGIYPAANSRQLFQTASKLTAAASLH 391
Query: 759 ---------------NLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFL 803
L + +V L E G L+FC SR C+ A + + +
Sbjct: 392 DTIPPQRIIEPSTFKQLSNSATNAMVALAVETAAAGFGSLVFCGSRNACQVHAATIGEAM 451
Query: 804 KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVET 863
+ E + LR GLDP LE T+ G +H+AG+T EERE++
Sbjct: 452 PP------AEPEELNKRLDLLAELRSLACGLDPALETTIIKGAGFHNAGMTTEERELIAQ 505
Query: 864 CYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKG 923
Y +G+++VL AT +LAAGVNLPARRVI R+GR+ + +RQM GRAGR G D G
Sbjct: 506 AYDQGVIKVLVATCSLAAGVNLPARRVIINGARMGRELVGPAMFRQMCGRAGRKGKDDAG 565
Query: 924 ESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVR 983
E+ LIC +++ + LL+ P + SCL+ +K G+ A+LE VA G+V E I +VR
Sbjct: 566 ETYLICVKADMQAVCDLLDADMPAIESCLAPEKRGLKRALLEAVATGLVSGCEAIKEFVR 625
Query: 984 CTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLI 1043
CTLL T + + +L+ L + L ED Y TPLG+A S+ PE+ L
Sbjct: 626 CTLLYRTLDKKIAYTIMKTALQELVDEELLIRREDES-YEATPLGQAVVASAFSPEDGLF 684
Query: 1044 VLDDLSRAREGFVLASDLHLVYLSTPINVEVEP--DWELYYERFLELSALDQS---VGNQ 1098
V ++L RA + FV+ D+H+ Y+ TP+ + DW+++ + +L LD+S
Sbjct: 685 VHEELKRALQAFVMDGDMHIFYMFTPLQAAMNTPIDWQIFRD---QLDRLDESGLRALQF 741
Query: 1099 VGVSEPYLMRMAH-GAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFY 1157
VGV ++ M GA ++ ++ ++ + R+ +R Y
Sbjct: 742 VGVQPGFVNTMVQSGASLKETTPIQ------------------------MKQARIYRRAY 777
Query: 1158 VALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAK 1217
A L L E P+ + + +K+ RG VQ L + FA+ + FC+R+ W + ++
Sbjct: 778 TAFQLRDLSNEVPLSTIAQRYKIPRGTVQTLAQQCHGFAAGIVKFCQRMNWGMMAAVLDH 837
Query: 1218 FQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
++R+ G RA+++E+ + +VK AR L G R A+AEA ++V L
Sbjct: 838 MRDRLEAGARADLLEMAQVTFVKSWTARLLRDNGFRNLRALAEAEPKDLVPVLM 891
>gi|403263394|ref|XP_003924019.1| PREDICTED: helicase POLQ-like [Saimiri boliviensis boliviensis]
Length = 1099
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 440/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 317 LPSKVRDLYVQLKGIEKLYEWQHTCLTLKSVQERKNLIYSLPTSGGKTLVAEILMLQELL 376
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
+ K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 377 CSRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 436
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 437 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGAILEMTLAKILY-----TSKTT-- 489
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 490 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 533
Query: 745 SKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
I + L K DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 534 EIDSKAENGITFSRFLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 592
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I+ L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 593 EMICKFLSKEYLKHKEKEK-----CEVINNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 647
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + +F+ +Y+QM GRAG
Sbjct: 648 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAMEFLKRNQYKQMIGRAG 707
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ PL +C S E G+ L ++ I
Sbjct: 708 RAGIDTIGESILILQEKDKQQVLELITR---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 764
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWN-------EDTK 1020
+DI+ ++ T + KS +SLR+L + ++ + E
Sbjct: 765 ATNLDDIYHFMNGTFFGVQQNILLKEKSLWEITVESLRYLTEKGLVQKDTIYKSEEEVQH 824
Query: 1021 LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 825 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 884
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G +R K D
Sbjct: 885 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQAIR---KKVDKD------------- 928
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ +L L++ET + V E F + RG VQ L A F+S
Sbjct: 929 -------------VVNRLYLSFVLYSLLKETSIWTVSEKFNMPRGYVQNLLTGAASFSSC 975
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 976 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1035
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +++ I RR AK+I + A+ ++ EKAE
Sbjct: 1036 LANANPEVLIRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1072
>gi|332233399|ref|XP_003265889.1| PREDICTED: helicase POLQ-like [Nomascus leucogenys]
Length = 1101
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 290/828 (35%), Positives = 441/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCQKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++VIDELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVIDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 --SKKMDVVRTILTAAN------LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
K + T N L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EVDSKAENGMTFSHLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTVGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL------ 1021
+DI+ ++ T + KS +SLR+L + L+ + K
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G +R K D
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQAIR---KKVDKD------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ +L L++ET + V E F + RG +Q L A F+S
Sbjct: 931 -------------VVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ L+ AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLHSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLVRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|296196119|ref|XP_002745688.1| PREDICTED: helicase POLQ-like [Callithrix jacchus]
Length = 1101
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 289/828 (34%), Positives = 440/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYVQLKGIEKLYEWQHTCLTLKSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
+ K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CSRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGAILEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EIDSKAENGMTFSRFLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ +G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGSGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + +F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAMEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITR---PLENCYSHLFQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWN-------EDTK 1020
+DI+ ++ T + KS +SLR+L + L+ + E
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQH 826
Query: 1021 LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G +R K D
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQAIR---KKVDKD------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ +L L++ET + V E F + RG VQ L A F+S
Sbjct: 931 -------------VVNRLYLSFVLYSLLKETNIWTVSEKFNMPRGYVQNLLTGAASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLTH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +++ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLIRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|126331098|ref|XP_001371040.1| PREDICTED: helicase, POLQ-like [Monodelphis domestica]
Length = 1061
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 293/827 (35%), Positives = 449/827 (54%), Gaps = 101/827 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ ++ + +GI KLY WQ CL + + QR+NL+Y TS GK+ VAEILML+ L+
Sbjct: 275 LPSKVRDLFVQFKGIKKLYDWQHTCLTLTCLQQRKNLIYSLPTSGGKTLVAEILMLQELL 334
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 335 CRQKNVLMILPYVAIVQEKISSLSSFGLELGFLVEEYAGSKGRFPPIKRRGKKSLYIATI 394
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK + LVN ++E+GR++E+G++VIDELHM+ + +RG +LE+ L K+ Y
Sbjct: 395 EKGHGLVNSLIEDGRINELGLVVIDELHMIGEGSRGAVLEITLAKILYM----------- 443
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
S T+ QI+GMSAT+ NV + ++L+A Y + FRPV L+EY+K+ + I+
Sbjct: 444 --SKTT----------QIIGMSATLNNVEELQEFLKAEYYTSKFRPVELKEYLKINDTIF 491
Query: 745 -----SKKMDVVRTILT---AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
S+K +L + NL DPDH+V L EV+ +S L+FC ++K CE+ A
Sbjct: 492 EVDIKSEKGYTFSRLLNCKYSDNLKKMDPDHLVALVTEVI-PSYSCLVFCPTKKNCENVA 550
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVE 856
+ KFL K + + E D + + L PVL+ T+P GVAYHH+GLT +
Sbjct: 551 DMICKFLNKDYLK--HREKEKCDFLKNLKNISN--GSLCPVLKRTVPFGVAYHHSGLTND 606
Query: 857 EREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGR 916
ER+++E Y G++ +LT TSTLAAGVNLPARRVI R P I F+ +Y+QM GRAGR
Sbjct: 607 ERKILEEAYATGVLCLLTCTSTLAAGVNLPARRVILRAPYIATQFLKRNQYQQMIGRAGR 666
Query: 917 TGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGIV 972
G+DT GES+LI + ++ ++ L+N PL +C S E G+ +L ++ I
Sbjct: 667 AGMDTVGESILILQEKDKHLVLDLVNS---PLENCYSHLGQEVTKGIESLLLSLIGLKIA 723
Query: 973 QTAEDIHRYVRCTL-------LNSTKPFQDVVKSAQDSL--RWLCHRKFLEWN-EDTKL- 1021
+ EDI+ ++ T L+ K ++ + A ++L + L +K + N E+++
Sbjct: 724 KNLEDIYHFMCGTFFGIQQKSLSKEKSLWEISRKALENLIEKGLLQKKNISKNAEESQCD 783
Query: 1022 YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWE 1079
T LG+A+ +L I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 784 IHITKLGQASLKGTLDLAYCGILYKDLKKGLEGLVLESYLHLIYLTTPYDMVSQCRPDWM 843
Query: 1080 LYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGIT 1139
LY + LS+ +Q V VGVSE ++++ A G ++ +D K
Sbjct: 844 LYLRQLNHLSSAEQKVAAIVGVSESFIIKKASGQAIK-----KDVDKD------------ 886
Query: 1140 SNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMV 1199
V RFY++ +L L++ET V V E F ++RG VQ L A F+S +
Sbjct: 887 ------------VVNRFYLSFVLYALLKETNVWSVSEKFNMSRGYVQNLLTGAASFSSCI 934
Query: 1200 SVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAI 1258
FCE L ++ L+ + ++S+ VRA++V L + + SRA+ LY AG +T +
Sbjct: 935 LHFCEELEEFWVYRALLTELTKKLSYCVRADLVPLMEVTGILQSRAKQLYNAGYKTVAHL 994
Query: 1259 AEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
A A +++ I RR AK+I + A+ ++ EKAE
Sbjct: 995 ANADPEVLIRT-------INHLSRR----QAKQIVSSAKMLINEKAE 1030
>gi|351697255|gb|EHB00174.1| Helicase POLQ-like protein [Heterocephalus glaber]
Length = 1060
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 287/825 (34%), Positives = 444/825 (53%), Gaps = 97/825 (11%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI LY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 284 LPSKVRDLYVQFKGIETLYEWQHTCLTLSCVQERKNLIYSLPTSGGKTLVAEILMLQELL 343
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 344 CRRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGKFPPTKRREKKSIYIATI 403
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EKA+SLVN ++E GR+S +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 404 EKAHSLVNSLIETGRISSLGLVVVDELHMIGEGSRGAILEMTLAKILY-----TSKTT-- 456
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + ++LQA Y FRPV L+EY+K+ + IY
Sbjct: 457 ----------------QIIGMSATLNNVQDLQEFLQAEYYSNQFRPVELKEYLKINHTIY 500
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
+ M R + + +L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 501 AVDSKAESGMTFSRLLHYKYSDSLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 559
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFLKK + + I+ LR G L PVL+ T+P GVAYHH+GLT
Sbjct: 560 EMLCKFLKKEYLKHKEKEK-----CELINNLRSISGGHLCPVLKRTVPFGVAYHHSGLTS 614
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
EER+++E Y G++ + TSTLA G+NLPARRVI R P + ++F+ ++Y+QM GRAG
Sbjct: 615 EERKLLEEAYSTGVLCLFACTSTLATGINLPARRVILRAPYVAKEFLKRSQYKQMIGRAG 674
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKN-GMTHAILEVVAGGIVQT 974
R GIDT GES+LI + ++ +K++ L++ +S L ++ N G+ L ++ I
Sbjct: 675 RAGIDTIGESILILQEKDKQKVLELISRPPENCYSHLVQEFNKGIQTLFLSLIGLKIATN 734
Query: 975 AEDIHRYVRCTLLNSTKPF----QDVVKSAQDSLRWLCHRKFL------EWNEDTKL-YS 1023
DI+R++ T + + + K +SLR+L + L E E+ +
Sbjct: 735 LGDIYRFMNGTFFGVQQKILLKEKSLWKITVESLRYLTEKGLLQKCPNPESEEELHCNFH 794
Query: 1024 TTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELY 1081
T LG+A+F ++ I+ DL + EG VL + LHL+YL+TP ++ + +PDW +Y
Sbjct: 795 ITKLGKASFKGTIDLAYCDILYRDLKKGLEGLVLENLLHLIYLTTPYDLVSQCDPDWMIY 854
Query: 1082 YERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSN 1141
+ + +LS +Q+V + +GVSE Y+ + A G R K+ T
Sbjct: 855 FRQISQLSPAEQNVASLLGVSESYIAKKASGQATR--KKVDKDT---------------- 896
Query: 1142 NMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSV 1201
R Y++ +L L++ET V V E F + RG +Q L A F+S V
Sbjct: 897 -----------VNRLYLSFVLHALLKETNVWNVSEKFNLPRGSIQNLLTAAASFSSSVLH 945
Query: 1202 FCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAE 1260
FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY G R+ + +A
Sbjct: 946 FCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSTGYRSLMHLAN 1005
Query: 1261 ASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
A ++K I RR A++I + A+ ++ EKAE
Sbjct: 1006 ADPDVLIKT-------IDHLSRR----QARQIVSSAKMLLQEKAE 1039
>gi|328724320|ref|XP_003248104.1| PREDICTED: DNA polymerase theta-like isoform 2 [Acyrthosiphon pisum]
Length = 1583
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 253/668 (37%), Positives = 383/668 (57%), Gaps = 58/668 (8%)
Query: 615 KDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAA 674
+ +VA+ TIEKAN ++NR++EE L ++G IV+DELHM+ D NRGYLLELLLTK++Y +
Sbjct: 11 RSVNVAIATIEKANGIINRLIEEDGLQDVGCIVVDELHMLGDSNRGYLLELLLTKIKYMS 70
Query: 675 GEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLE 734
K +QIVGMSAT+PN+ +A WL A LY T++RPVPL+
Sbjct: 71 ------------------KIRSNLSIQIVGMSATLPNLDILAKWLDATLYHTDYRPVPLK 112
Query: 735 EYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
EY+K+G +Y+ + + + + DPD + LC + + +G+S+LIFC ++K CES
Sbjct: 113 EYLKIGKKVYNANNLSLSHTIEPSVVIKNDPDDVKYLCIDTILQGYSILIFCFTKKWCES 172
Query: 795 TARHVSKFLKKFSINVHSSDSEFI-------DITSAIDALRRCPAGLDPVLEETLPSGVA 847
A ++ +K + S + + ++ LRRCP GL+ L +T+ GVA
Sbjct: 173 LALEIASEIKHLGGDNKSKVGNDLRNQLNGESLGDVLEQLRRCPVGLETDLSKTISFGVA 232
Query: 848 YHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY 907
+HHAGLT++ER+++E +++ +VRVL ATSTL++GVNLPARRVI R P ID +Y
Sbjct: 233 FHHAGLTMDERDIIEGAFKQNIVRVLIATSTLSSGVNLPARRVIVRSPHCHGFPIDILQY 292
Query: 908 RQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL--SEDKNGMTHAILE 965
RQM GRAGR G+DT GES LIC E + + ++ PP+ SCL + + + A+LE
Sbjct: 293 RQMIGRAGRMGVDTAGESYLICNENERRMGEEIATQNLPPIKSCLGVGDFSSCLKRALLE 352
Query: 966 VVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTT 1025
VVAG +V T E+ Y++CTLL + + L+ L +F+ N D KL S T
Sbjct: 353 VVAGCVVCTTEEAFEYIKCTLLYISNSENLNETPINECLKLLIEHQFVREN-DNKL-SPT 410
Query: 1026 PLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEP---DWELYY 1082
LG+A +S+ PE L ++ +L RAR+ FVL S+LHL+YL TP +V + DW
Sbjct: 411 NLGQACLAASVTPEIGLKLIKELDRARQNFVLDSELHLLYLITPYSVSDQIGHLDWFRVL 470
Query: 1083 ERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNN 1142
+ +L + VG+ +G+ E ++++ G S
Sbjct: 471 HVWEKLPHSMRKVGDMIGIEEGFIVKAMTGTSFSTS------------------------ 506
Query: 1143 MLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVF 1202
SD L V +RFY L+L L+ E P+ V + ++G++Q+LQ+++ FA MV+ F
Sbjct: 507 --SDKHKLAVHRRFYTTLLLHDLINEIPINTVVLKYGTSKGLLQSLQQSSSTFAGMVTQF 564
Query: 1203 CERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEAS 1262
C+RLGW LE LI++F R+ FGV+ ++VEL + + AR LY AG++ +A A
Sbjct: 565 CKRLGWSSLELLISQFSERLQFGVQRQLVELLRLDCLNSITARTLYNAGIQNIPELALAD 624
Query: 1263 ISEIVKAL 1270
+ + + L
Sbjct: 625 LRLVQRTL 632
Score = 233 bits (594), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 244/463 (52%), Gaps = 59/463 (12%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
T L S L L + + +IE+P+ +LA MEL+G G++ + ++ + + K +
Sbjct: 1180 TLKLMSTLRHQLKQIYIYKTFKDIEMPIQIILAKMELYGFGLNKKHLVELNDTVNKLMAN 1239
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
+ ++ + +G++F++ + + A V K+ TD H +
Sbjct: 1240 ISEQGFEQSGIRFNMQSTLEWAKV---------------KKKLKLTDSS-------SHLL 1277
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
V ++K R L+ L N + + ++ Q +H T + TGR+SM EPNLQ +
Sbjct: 1278 VELVKNWRKLSCLRNTHIN-------MYLTIQNDRVHCDS-NTYSNTGRISMHEPNLQNI 1329
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
++ + NE ++ R F+P + L++ D+ QIELR++AH SKD
Sbjct: 1330 PK--DYVIENE------------ILSLRSAFVPKSDQ-TLVSVDFCQIELRVLAHLSKDS 1374
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+ L+ P GDVF ++++W E V + R +TK++ YG+LYGMG TLSE LN +
Sbjct: 1375 ILLSALTSP-GDVFINLSSKWHNIPEIEVCDELRQKTKQVCYGMLYGMGTVTLSETLNIT 1433
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
+EA + I FK +FPGV + + V C G V++L GR R I K KS+ +
Sbjct: 1434 QDEAHKLISEFKRTFPGVNKYFNECVLQCRSMGLVKTLSGRIRHFPDINSEVPKIKSQVE 1493
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
RQA+N+I QGSAAD+ K+AMI + II GV L R L++ +HDEL+
Sbjct: 1494 RQAINTIIQGSAADVTKMAMIKVDKIINQGV-------------LNTRVHLVMHLHDELI 1540
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+V+ +V+ EA S + K ME+A L VPL VK++ GS+WG L+
Sbjct: 1541 FDVENTVLDEACSTIIKTMEAAVNLCVPLPVKLRKGSSWGDLK 1583
>gi|225562983|gb|EEH11262.1| helicase and polymerase containing protein tebichi [Ajellomyces
capsulatus G186AR]
Length = 958
Score = 445 bits (1145), Expect = e-121, Method: Compositional matrix adjust.
Identities = 266/814 (32%), Positives = 423/814 (51%), Gaps = 106/814 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ + + G++ +YPWQ CL G L +NLVY A T GKS VA++LML+R+I
Sbjct: 132 LPPQLVANFASLGVNCIYPWQASCLLGRGHLTAEKNLVYSAPTGGGKSLVADVLMLKRVI 191
Query: 568 -STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHV------------------------R 602
K A+LVLPYV++ EK + L ++E + ++V
Sbjct: 192 EDPAKRAILVLPYVALVQEKLKWLRRVVEGVDKNVDMPTTADEASSAPKWKQPQKSIRVT 251
Query: 603 SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
++G + DT +AVCTIEKANSLVN +EE ++++G++V+DELHM+ D++RGYL
Sbjct: 252 GFFGGSKTRATWTDTDIAVCTIEKANSLVNAAIEECSINDLGVVVLDELHMLDDEHRGYL 311
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAA 722
+E+++TKL + +QIVGMSAT+ N +A WL A
Sbjct: 312 IEIMVTKLLLLQQD-----------------------IQIVGMSATLSNTEVLAKWLHAN 348
Query: 723 LYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTIL------TAAN--------------- 759
Y + +RP+P++E++ NAIY + + RT + ++ N
Sbjct: 349 YYISKYRPIPIQEHLVYNNAIYPATSSKEFFRTAMQLNKPDSSPNYSLACRIIDRSMHKE 408
Query: 760 LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFID 819
LG + +V L E G+ L+FC SR+ C+S A VS + + + +D
Sbjct: 409 LGNPTANAMVSLALETALSGYGALVFCGSRQACQSNAVLVSHAMPDETALDNDLLERRMD 468
Query: 820 ITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTL 879
+ + + +L P GLDPVL+ T+ GVA+HHAGLT EER+++ Y KG +RVL AT +L
Sbjct: 469 LIAGLQSL---PCGLDPVLQMTVIKGVAFHHAGLTTEERDLIAEAYDKGTLRVLIATCSL 525
Query: 880 AAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMG 939
AAG+NLPARRVI R+GRD + RQM GRAGR G D GE+ L C+ ++++ +
Sbjct: 526 AAGINLPARRVILCGARMGRDLVGPAMLRQMRGRAGRKGKDEVGETYLCCQKDDLEAVAE 585
Query: 940 LLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKS 999
LL P + S L+ +K G+ A+LE +A +V + E I+ YV CTLL ++
Sbjct: 586 LLEAEMPAIASGLTPEKRGIKRALLEAIATRLVSSRESINEYVMCTLLYQNMEAAELFSM 645
Query: 1000 AQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLAS 1059
+L L ++ E + Y T LG+A SSL PE+ + + D+L RA + FV+
Sbjct: 646 VDKTLEDLVDNGLVDL-EQAESYEPTRLGQAVVSSSLSPEDGIFIHDELKRALKSFVMDG 704
Query: 1060 DLHLVYLSTPI--NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRI 1117
++H+ Y+ P+ + + DW ++ ++ L VGV ++ +MA
Sbjct: 705 EMHIFYMFAPLQNSSPTDIDWSIFRDQMNNLDESGIRALQFVGVEPAFVNKMAQSG---- 760
Query: 1118 SSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCET 1177
++++D T R+ +R Y A L L E P+ + +
Sbjct: 761 -TRIKDETIA-----------------------RIYQRAYTAFQLRDLSNEVPISTIAQR 796
Query: 1178 FKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIP 1237
+ + RG VQ L + FA+ + FC+R+GW L ++ ++R+ G RA+++E+ +
Sbjct: 797 YNIPRGNVQTLAQTCHGFAAGIVKFCQRMGWDMLAVVLDHMRDRLHAGARADLLEMAQVA 856
Query: 1238 YVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
YVK AR L++ G ++ A+AEA ++V L
Sbjct: 857 YVKSRTARLLWENGFKSLRALAEADPKDLVPVLM 890
>gi|66815705|ref|XP_641869.1| hypothetical protein DDB_G0279107 [Dictyostelium discoideum AX4]
gi|60469909|gb|EAL67892.1| hypothetical protein DDB_G0279107 [Dictyostelium discoideum AX4]
Length = 1238
Score = 445 bits (1144), Expect = e-121, Method: Compositional matrix adjust.
Identities = 288/840 (34%), Positives = 442/840 (52%), Gaps = 109/840 (12%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLIS 568
LP + +IYK+RG+ +LY WQ ECL +L NL+Y TS GK+ VAEI++ R L+
Sbjct: 438 LPKSVGTIYKRRGMKQLYDWQKECLSDSNLLLGENLIYSLPTSGGKTLVAEIILFRNLLI 497
Query: 569 TGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKAN 628
K +L + P+VSI EK E + L V Y+G G + + +CTIEKAN
Sbjct: 498 KNKKSLFIFPFVSIVCEKTESMHEFSSALQIPVEGYHGCNGTIPVLPGKRLLICTIEKAN 557
Query: 629 SLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSG 688
+VN+++E+GRL +IG +V+DE+HM+ D RG LLE+L++KL Y S G+
Sbjct: 558 IIVNQLIEDGRLLDIGCVVVDEIHMIGDGERGQLLEVLISKLLYM--------SKGQ--- 606
Query: 689 TSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKM 748
+QI+GMSAT+PN+ + W + +Y+ FRPVPL EYIK+G+ +Y K+
Sbjct: 607 -----------IQIIGMSATIPNIDNLQKWFRGGVYQGTFRPVPLTEYIKIGDKLYDKEN 655
Query: 749 DVVRTIL-TAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFS 807
++V+++ T AN +H ++LC EVV + HSVLIFC+S+ S A ++K +
Sbjct: 656 NLVKSLQGTEAN-----ENHTLQLCLEVVPK-HSVLIFCASKLLTVSLALQLAKSFPQAI 709
Query: 808 INVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRK 867
++ + E + I++ C D + + +GVAYH+A LT +EREV+E +++
Sbjct: 710 LDNRRDEREI--LIQLIESSNGCKVEED--FKRMIMAGVAYHNADLTNDEREVIERGFKE 765
Query: 868 GLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESML 927
+ VL ATSTL+ GVNLPARRVI R PR+GR+ +D YRQM GRAGR GID GES+L
Sbjct: 766 RSLLVLCATSTLSTGVNLPARRVILRSPRMGRNVLDIRSYRQMVGRAGRAGIDEFGESIL 825
Query: 928 ICK---PEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRC 984
+C P++ KK LL PL S ++++ IL+ + GI I +
Sbjct: 826 MCDHFAPDKAKK---LLTSPMDPLLSSINKNVESFQKIILDSICSGIASDKFSILSFFSY 882
Query: 985 TLLNS-------TKPFQDVVKSAQDSLRWLCHRKFLEWN--------------------- 1016
T ++ P++ + K DS+ L ++ +
Sbjct: 883 TFYSTHLLPPKDMTPYEYIRKLVNDSVEALIKSGHIQISCNQPDPNDKKTIGTAKFDLDG 942
Query: 1017 ---EDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD-LHLVYLSTPI-N 1071
E++ Y TPLG A F S L + + + D+L + G V+ S+ LH+ Y+ +P+ N
Sbjct: 943 KPTEESIRYEYTPLGYACFRSGLSIKNAKFLYDELRIIQNGAVVISEQLHMCYIISPVHN 1002
Query: 1072 VEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGK 1131
+ PD + Y + +L Q V + +S+ Y+ + +
Sbjct: 1003 IPEIPDLDQYGKFLSKLKGPKQLVAKLLEISDQYVY---------------------YKQ 1041
Query: 1132 LEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQEN 1191
L+ + IT Q +RF+ A++L+ L+ E P+ V + + RG VQ+L
Sbjct: 1042 LD-EMAIT-------FQEENRNRRFFSAMVLNDLIHEVPLSMVSTKYNLNRGTVQSLMNG 1093
Query: 1192 AGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAG 1251
A A MVS+FC++LGW +LE L+ + R+ GVR EIV L I VK +RARAL+ AG
Sbjct: 1094 AASHAWMVSLFCKKLGWVELEALVNLYIQRLDKGVRHEIVPLVEINGVKQARARALWAAG 1153
Query: 1252 LRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEEARIAA 1311
+T +IA AS E+ KA+ + + + +A I A K++ K+EE R A
Sbjct: 1154 FKTVKSIALASPEELNKAV--------KLGKFNSISIAATIIREAGKLLERKSEELRAKA 1205
>gi|410213602|gb|JAA04020.1| helicase, POLQ-like [Pan troglodytes]
Length = 1101
Score = 444 bits (1143), Expect = e-121, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 439/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHSCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL------ 1021
+DI+ ++ T + KS +SLR+L + L+ + K
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G I K+
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQA--IGKKVDKD-------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ IL L++ET + V E F + RG +Q L F+S
Sbjct: 931 -------------VVNRLYLSFILYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLVRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|410335387|gb|JAA36640.1| helicase, POLQ-like [Pan troglodytes]
Length = 1101
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 439/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHSCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EVDSQAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL------ 1021
+DI+ ++ T + KS +SLR+L + L+ + K
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G I K+
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQA--IGKKVDKD-------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ IL L++ET + V E F + RG +Q L F+S
Sbjct: 931 -------------VVNRLYLSFILYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLVRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|410255698|gb|JAA15816.1| helicase, POLQ-like [Pan troglodytes]
Length = 1101
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 439/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHSCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL------ 1021
+DI+ ++ T + KS +SLR+L + L+ + K
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G I K+
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQA--IGKKVDKD-------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ IL L++ET + V E F + RG +Q L F+S
Sbjct: 931 -------------VVNRLYLSFILYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLVRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|19110782|gb|AAL85274.1|AF436845_1 DNA helicase HEL308 [Homo sapiens]
Length = 1101
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 443/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWN------EDTKL 1021
+DI+ ++ T + KS +SLR+L + L+ + E+ +
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G + GK +
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQAI--------------GK-----KV 927
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
N V R Y++ +L L++ET + V E F + RG +Q L F+S
Sbjct: 928 DKN----------VVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLVRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|397524624|ref|XP_003832289.1| PREDICTED: helicase POLQ-like [Pan paniscus]
Length = 1101
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 287/828 (34%), Positives = 439/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHSCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL------ 1021
+DI+ ++ T + KS +SLR+L + L+ + K
Sbjct: 767 AMNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G I K+
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQA--IGKKVDKD-------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ +L L++ET + V E F + RG +Q L F+S
Sbjct: 931 -------------VVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLVRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|110556640|ref|NP_598375.2| helicase POLQ-like [Homo sapiens]
gi|119626339|gb|EAX05934.1| DNA helicase HEL308, isoform CRA_a [Homo sapiens]
gi|146327581|gb|AAI41525.1| Helicase, POLQ-like [synthetic construct]
Length = 1101
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 443/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWN------EDTKL 1021
+DI+ ++ T + KS +SLR+L + L+ + E+ +
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G + GK +
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQAI--------------GK-----KV 927
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
N V R Y++ +L L++ET + V E F + RG +Q L F+S
Sbjct: 928 DKN----------VVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLVRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|426344841|ref|XP_004038961.1| PREDICTED: helicase POLQ-like [Gorilla gorilla gorilla]
Length = 1101
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 287/828 (34%), Positives = 441/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVIIRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWN------EDTKL 1021
+DI+ ++ T + KS +SLR+L + L+ + E+ +
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G I K+
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQA--IGKKVDKD-------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ +L L++ET + V E F + RG +Q L F+S
Sbjct: 931 -------------VVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLVRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|296434521|sp|Q8TDG4.2|HELQ_HUMAN RecName: Full=Helicase POLQ-like; AltName: Full=Mus308-like helicase;
AltName: Full=POLQ-like helicase
Length = 1101
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 443/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWN------EDTKL 1021
+DI+ ++ T + KS +SLR+L + L+ + E+ +
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G + GK +
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQAI--------------GK-----KV 927
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
N V R Y++ +L L++ET + V E F + RG +Q L F+S
Sbjct: 928 DKN----------VVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLVRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|410306630|gb|JAA31915.1| helicase, POLQ-like [Pan troglodytes]
Length = 1120
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 441/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHSCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EVDSQAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWN------EDTKL 1021
+DI+ ++ T + KS +SLR+L + L+ + E+ +
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G I K+
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQA--IGKKVDKD-------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
V R Y++ IL L++ET + V E F + RG +Q L F+S
Sbjct: 931 -------------VVNRLYLSFILYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLVRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|426231978|ref|XP_004010013.1| PREDICTED: helicase POLQ-like [Ovis aries]
Length = 1090
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 288/830 (34%), Positives = 443/830 (53%), Gaps = 107/830 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 308 LPSKVRDLYVQFKGIEKLYEWQHTCLTLKSVQERKNLIYSLPTSGGKTLVAEILMLQELL 367
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 368 CRRRDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKG--KFPPIKRREKKSLYIA 425
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E GR+S +G++V+DELHM+ + RG +LE+ L K+ Y TS ++
Sbjct: 426 TIEKGHSLVNSLIETGRISSLGLVVVDELHMIGEGTRGAILEMTLAKILY-----TSKTT 480
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ +
Sbjct: 481 ------------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDT 522
Query: 743 IYS------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY M R + + L DPDH+V L EV+ +S L+FC ++K CE+
Sbjct: 523 IYEVDSRAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPTKKNCEN 581
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + K L K + + + I L+ G L VL+ T+P GVAYHH+GL
Sbjct: 582 VAEMICKSLSKECLKHKEKEKQ-----EVIMNLKNVSGGNLCRVLKRTIPFGVAYHHSGL 636
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GR
Sbjct: 637 TSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGR 696
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GID+ GES+LI + ++ ++++ L+++ PL +C S E G+ L ++
Sbjct: 697 AGRAGIDSVGESILILQEKDKQQVLELISK---PLENCYSHLVQEFTKGIQTLFLSLIGL 753
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWN-------ED 1018
I +DI+ ++ TL + KS +SLR+L + L + E
Sbjct: 754 KIATNLDDIYHFMSGTLFGVQQKVLLKEKSLWEITMESLRYLTEKGLLRKDTMYGSEEEF 813
Query: 1019 TKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEP 1076
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + +P
Sbjct: 814 QNNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDMASQCDP 873
Query: 1077 DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
DW +Y+ +F +LS +Q+V VGVSE Y+ + A G +R K D
Sbjct: 874 DWMIYFRQFNQLSPAEQNVAALVGVSENYIGKKASGQAIR---KKVDKN----------- 919
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
+ R Y++ IL L++ET + V E F + RG +Q+L A F+
Sbjct: 920 ---------------IVNRLYLSFILYTLLKETNIWSVSEKFNMPRGYIQSLLSAAAAFS 964
Query: 1197 SMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTP 1255
S V FCE L ++ L+ + ++++ V+AE++ L + V RAR LY AG ++
Sbjct: 965 SCVLHFCEELEEFWVYRALLGELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSL 1024
Query: 1256 LAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +++ I RR AK+I + A+ ++ EKAE
Sbjct: 1025 THLANANPEVLIRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1063
>gi|332819388|ref|XP_003310356.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Pan troglodytes]
Length = 1101
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 286/828 (34%), Positives = 439/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 319 LPSKVRDLYAQFKGIEKLYEWQHSCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 378
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 379 CCRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATI 438
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 439 EKGHSLVNSLIETGRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT-- 491
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY
Sbjct: 492 ----------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIY 535
Query: 745 S------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
M R + + L DPDH+V L EV+ +S L+FC S+K CE+ A
Sbjct: 536 EVDSQAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVA 594
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + I L+ G L PVL+ T+P GVAYHH+GLT
Sbjct: 595 EMICKFLSKEYLKHKEKEK-----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTS 649
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAG
Sbjct: 650 DERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAG 709
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++++ L+ + PL +C S E G+ L ++ I
Sbjct: 710 RAGIDTIGESILILQEKDKQQVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKI 766
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL------ 1021
+DI+ ++ T + KS +SLR+L + L+ + K
Sbjct: 767 ATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQY 826
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 827 NFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDW 886
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y+ +F +LS +Q+V +GVSE ++ + A G I K+
Sbjct: 887 MIYFRQFSQLSPAEQNVAAILGVSESFIGKKASGQA--IGKKVDKD-------------- 930
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
+ R Y++ +L L++ET + V E F + RG +Q L F+S
Sbjct: 931 -------------IVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSC 977
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +
Sbjct: 978 VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMH 1037
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +V+ I RR AK+I + A+ ++ EKAE
Sbjct: 1038 LANANPEVLVRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1074
>gi|378728180|gb|EHY54639.1| DNA polymerase theta subunit [Exophiala dermatitidis NIH/UT8656]
Length = 927
Score = 442 bits (1137), Expect = e-120, Method: Compositional matrix adjust.
Identities = 279/819 (34%), Positives = 421/819 (51%), Gaps = 106/819 (12%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+++ + G+ +YPWQ CL G+L +NLVY A T GKS VA++L+L+R+I
Sbjct: 120 LPAQLIENFAALGVHAIYPWQSSCLLGKGLLTGEQNLVYTAPTGGGKSLVADVLLLKRII 179
Query: 568 -STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQG----------------G 610
+ G+ A+LVLPYV++ EK L L++ + +++ G G
Sbjct: 180 DNPGQKAILVLPYVALVQEKLRWLRALVDGVSKNIEELDGTPNPTWRRPSNLVRVAGFFG 239
Query: 611 GSLPK----DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELL 666
GS D VAVCTIEKANSLVN +EEG+ +++GI+V+DELHM+ D++RGYL+ELL
Sbjct: 240 GSKSTVNWADCDVAVCTIEKANSLVNSAIEEGKDAKLGILVLDELHMLNDEHRGYLMELL 299
Query: 667 LTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYET 726
TKL S E +Q+VGMSAT+PN +A WL+A Y
Sbjct: 300 ATKL-----------MSLETP------------VQVVGMSATLPNPQLLAKWLKAKFYIA 336
Query: 727 NFRPVPLEEYIKVGNAIY----------------------SKKMDVVRTILTAANLGGKD 764
+RP+P+EE++ N IY +++ + +RTI + + ++
Sbjct: 337 KYRPIPIEEHLVYNNGIYLTANAKEFFRTATQLTAGDALPTQRPEPLRTISRSEHRDLQN 396
Query: 765 P--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITS 822
P + +V L E GH L+FCSSR+G E TA ++ ++ V D + +
Sbjct: 397 PMVNAVVALAVETAVAGHGALVFCSSRQGVERTATLIAD-----ALPVDHVDKGILGLRQ 451
Query: 823 AIDA-LRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAA 881
+ A L P G + + +P GV +HHAGLTVEER +V Y G+++V+ AT +LAA
Sbjct: 452 DLLASLHALPGGFESTFSKAVPCGVGFHHAGLTVEERNLVAEAYDTGVLKVMVATCSLAA 511
Query: 882 GVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLL 941
G+NLPARRVI R+GRD + RQM GRAGR G D GE+ L C+ +++ + LL
Sbjct: 512 GINLPARRVILNGARMGRDLVGPAMLRQMRGRAGRKGKDEVGETYLCCQKADLEAVAELL 571
Query: 942 NESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQ 1001
PP+ SCL+ +K G+ A+LEV+ + + + RYV +L+ T V+ +
Sbjct: 572 EAEMPPVESCLTPEKRGIKRALLEVIGIRMASSRTVLDRYVHSSLVWHTTEHGTVMDMVE 631
Query: 1002 DSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDL 1061
S++ L + E T LG A S L PE+ + V +L RA E FV+ DL
Sbjct: 632 TSIQELLESGLIRRTEYEDCLEPTSLGTAVVASGLSPEDGVFVHSELRRALESFVMDGDL 691
Query: 1062 HLVYLSTPINVE--VEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAHGAPMR 1116
H+ YL TP+ E W + + EL ALD+S +G+S + R+ +
Sbjct: 692 HIFYLFTPVQTSGLAEISWPTFRD---ELDALDESGLRAIRLIGISPALVNRLVNSG--- 745
Query: 1117 ISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCE 1176
KL++ T E RL RV +R Y A L L E PV EV
Sbjct: 746 --GKLKEDTPE-----EERLA-------------RVYRRVYSAFQLRDLCNEMPVHEVSV 785
Query: 1177 TFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTI 1236
F V RG +Q L + FA+ + FCER+GW L ++ +R+ G RA+++E+ +
Sbjct: 786 KFSVPRGHIQNLAQTCHGFAAGMIKFCERMGWGMLAAVLEHMLDRLRAGARADLLEMAQV 845
Query: 1237 PYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSS 1275
+VK AR ++ G ++ A+ EA +V + ++ +
Sbjct: 846 AFVKSRMARIFWENGFKSIRALGEADPHTLVPVMMQAQA 884
>gi|297466747|ref|XP_002704678.1| PREDICTED: LOW QUALITY PROTEIN: helicase, POLQ-like [Bos taurus]
Length = 1075
Score = 441 bits (1135), Expect = e-120, Method: Compositional matrix adjust.
Identities = 285/830 (34%), Positives = 442/830 (53%), Gaps = 107/830 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 293 LPSKVRDLYVQFKGIEKLYEWQHTCLTLKSVQERKNLIYSLPTSGGKTLVAEILMLQELL 352
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 353 CRRRDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKG--KFPPIKRREKKSLYIA 410
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E GR+S +G++V+DELHM+ + RG +LE+ L K+ Y TS ++
Sbjct: 411 TIEKGHSLVNSLIETGRISSLGLVVVDELHMIGEGTRGAILEMTLAKILY-----TSKTT 465
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ +
Sbjct: 466 ------------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDT 507
Query: 743 IYS------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY M R + + L DPDH+V L EV+ +S L+FC ++K CE+
Sbjct: 508 IYEVNSRAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIP-SYSCLVFCPTKKNCEN 566
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + K L K + + + I L+ G L VL T+P GVAYHH+GL
Sbjct: 567 VAEMICKSLSKEYLKHKEKEKQ-----EVIQNLKNVSGGNLCRVLRHTIPFGVAYHHSGL 621
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++ + +Y+QM GR
Sbjct: 622 TSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEKLKRNQYKQMIGR 681
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GID+ GES+LI + ++ ++++ L+++ PL +C S E G+ L ++
Sbjct: 682 AGRAGIDSAGESILILQEKDKQQVLQLISK---PLENCYSHLVQEFTKGIQTLFLSLIGL 738
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWN-------ED 1018
I +DI+R++ T + KS +SLR+L + L+ + E
Sbjct: 739 KIATNLDDIYRFMSGTFFGVQQKVLLKEKSLWEITMESLRYLTEKGLLQKDTMCGSKEEF 798
Query: 1019 TKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEP 1076
+ T LGRA+F ++ I+ DL + EG +L S LHL+YL+TP ++ + +P
Sbjct: 799 QNNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLMLESLLHLIYLTTPYDMASQCDP 858
Query: 1077 DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
DW +Y+ +F +LS +Q+V VGVSE ++ + A G +R K D
Sbjct: 859 DWMIYFRQFNQLSPAEQNVAALVGVSENFIGKKASGQAIR---KKVDKN----------- 904
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
+ R Y++ IL L++ET + V E F + RG +Q+L A F+
Sbjct: 905 ---------------IVNRLYLSFILYTLLKETNIWSVSEKFNMPRGYIQSLLSAAAAFS 949
Query: 1197 SMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTP 1255
S V FCE L ++ L+ + ++++ V+AE++ L + V RAR LY AG ++
Sbjct: 950 SCVLHFCEELEEFWVYRALLGELTKKLTYCVKAELIPLMEVTGVLEGRARQLYNAGYKSL 1009
Query: 1256 LAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +++ I RR AK+I + A+ ++ EKAE
Sbjct: 1010 THLANANPEVLIRT-------IDHLSRR----QAKQIVSSAKMLLHEKAE 1048
>gi|212540008|ref|XP_002150159.1| DNA-directed DNA polymerase theta, putative [Talaromyces marneffei
ATCC 18224]
gi|210067458|gb|EEA21550.1| DNA-directed DNA polymerase theta, putative [Talaromyces marneffei
ATCC 18224]
Length = 943
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 269/823 (32%), Positives = 427/823 (51%), Gaps = 117/823 (14%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + ++ GI +YPWQ CL G L +NL+Y A T GKS VA++LMLRR+I
Sbjct: 137 LPPALVANFQAVGIHSIYPWQASCLLGRGHLTAEKNLLYTAPTGGGKSLVADVLMLRRVI 196
Query: 568 STG-KMALLVLPYVSICAEKAEHLEVLLEPLGRHVRS-------------------YYGN 607
+ A+LVLPYV++ EK + L +++ + +++ + ++G
Sbjct: 197 DNPHRKAILVLPYVALVQEKLKWLRRIVQGVEKNIDTSASMKQPWKQPSKEIRVTGFFGG 256
Query: 608 QGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLL 667
+ DT +A+CTIEKAN+LVN +EE + ++ ++V+DE+HM+ D +RGYLLEL++
Sbjct: 257 SKSRATWADTDIAICTIEKANALVNTAIEECNIDDLAVVVVDEIHMLDDDSRGYLLELMV 316
Query: 668 TKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETN 727
TKL + +QI+GMSAT+ N +ADW+ A+ + +
Sbjct: 317 TKLLLLQQD-----------------------IQIIGMSATLSNTQLLADWIHASFHAST 353
Query: 728 FRPVPLEEYIKVGNAIY----SKKMDVVRTILTAANLGGKDP------------------ 765
RPVP+EEY+ N+IY SK+ T L + + P
Sbjct: 354 HRPVPIEEYLVYENSIYPAISSKEFFQTATKLQSGPVQDAVPPCRKIDPSPFKPLSLPTA 413
Query: 766 DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFI----DIT 821
+ +V L E G L+FC SR C+ A+ +S+ + S + D+E + D+
Sbjct: 414 NAMVSLAIETATAGFGALVFCGSRHACQMNAQLISEAMPSPS----TLDAELLERRLDLV 469
Query: 822 SAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAA 881
+ + +L P GLDPV + T+ GVA+HHAGLT EERE+V Y +G ++V+ AT +LAA
Sbjct: 470 AELGSL---PCGLDPVFQNTIIKGVAFHHAGLTTEERELVAEAYDRGTIKVIVATCSLAA 526
Query: 882 GVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLL 941
GVNLPARRVI + R+GRD + RQM GRAGR G DT GE+ LIC+ +++ I +
Sbjct: 527 GVNLPARRVIMQGARMGRDIVGPALLRQMRGRAGRKGKDTVGETYLICQQADLEVISEIW 586
Query: 942 NESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQ 1001
+ P + SCL++D G+ A+LE +A +V E I ++RCTLL T+ ++ K +
Sbjct: 587 DAETPAIDSCLAQDNKGVKRALLEGIATRLVSGREAIDEFMRCTLLCKTREEAEIEKLIE 646
Query: 1002 DSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDL 1061
SL+ L + + +D Y +T LG A SS P++ + V ++L RA + FV+ ++
Sbjct: 647 TSLQELVNTDLIRLRDDDS-YESTKLGAAIVASSFSPDDGIFVYEELKRALQAFVMDGEM 705
Query: 1062 HLVYLSTPINVEVEP--DWELYYERFLELSALDQSVGNQ---VGVSEPYLMRMAHGAPMR 1116
H+ Y+ TP++V + DW ++ + +L LD+S VGV ++ M
Sbjct: 706 HIFYMFTPLSVAMNTNIDWLIFRD---QLDQLDESGIRALLFVGVQPGFVNNMVQ----- 757
Query: 1117 ISSKLRDSTKGLHGKLEYRLGITSNNMLSD----AQTLRVCKRFYVALILSRLVQETPVL 1172
T N D Q R+ +R Y A L L E P+
Sbjct: 758 ----------------------TGRNFKEDDPKQLQLSRIYRRAYAAFQLRDLSNEVPLS 795
Query: 1173 EVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVE 1232
+ + V RG+VQ L + FA+ + FC+R+GW L ++ ++R+ G R +++E
Sbjct: 796 TIASRYNVPRGVVQTLAQTCHGFAAGMVKFCQRMGWGMLAVVLEHMRDRLQAGARDDLLE 855
Query: 1233 LTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSS 1275
+ + +VK AR L++ G R+ A+A +I+ L + S
Sbjct: 856 MAQVTHVKSWTARLLWENGFRSVRALASTDAKDIIPVLIMARS 898
>gi|303322945|ref|XP_003071464.1| DNA polymerase theta, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240111166|gb|EER29319.1| DNA polymerase theta, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320033458|gb|EFW15406.1| DNA-directed DNA polymerase theta [Coccidioides posadasii str.
Silveira]
Length = 937
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 276/816 (33%), Positives = 418/816 (51%), Gaps = 111/816 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + ++K G++ +YPWQ CL G L +NLVY A T GKS VA++LML+R+I
Sbjct: 131 LPESLVTNFEKLGVNCIYPWQASCLLGRGHLTAEKNLVYSAPTGGGKSLVADVLMLKRII 190
Query: 568 ST-GKMALLVLPYVSICAEKAEHLEVLLEPL-----------GRH------------VRS 603
K A+LVLPYV+I EK + L L+E + G H V
Sbjct: 191 DDPHKKAILVLPYVAIVQEKLKWLRRLVEGVDKRIDALVQVDGSHPSRAKFLQSSIRVTG 250
Query: 604 YYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLL 663
++G + DT +AVCTIEKAN LVN +EE ++ E+G++V+DELHM+ D++RGYL+
Sbjct: 251 FFGGSKSRATWSDTDIAVCTIEKANMLVNAAIEECKIDELGVVVLDELHMLDDEHRGYLI 310
Query: 664 ELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAAL 723
E++++KL + +QIVGMSAT+ N +A WL A
Sbjct: 311 EIMISKLMLLQQD-----------------------IQIVGMSATLSNTELLAKWLHANY 347
Query: 724 YETNFRPVPLEEYIKVGNAIY--SKKMDVVRTILTAANLGG------------------- 762
Y + +RP+P++E++ N +Y D +RT + G
Sbjct: 348 YISRYRPIPIQEFLVYDNLVYPAGNSKDFLRTAVVLNKSGATKTEALAARTIDKSVYKEL 407
Query: 763 KDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDI 820
++P + +V L E G+ L+FC SR+ C A +S + S+ + +D+
Sbjct: 408 ENPIINAMVSLALETAMSGYGALVFCGSRQACHMNALIISDAMPDDSMLDSDVLEKRMDL 467
Query: 821 TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLA 880
+ + +L P GLDPV E+T+ GVA+HHAGLT EER+++ Y G+++VL AT +LA
Sbjct: 468 IAGLQSL---PCGLDPVFEKTVIKGVAFHHAGLTAEERDLIAEGYDMGILKVLVATCSLA 524
Query: 881 AGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGL 940
AG+NLPARRVI R+GRD + RQM GRAGR G D GE+ L C ++++ ++ L
Sbjct: 525 AGINLPARRVILCGARMGRDLVGPAMLRQMRGRAGRKGKDEIGETFLCCTADDLEAVLDL 584
Query: 941 LNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSA 1000
L+ P + S LS +K G+ A+LE VA +V E I+ YV+C+L+ T +++
Sbjct: 585 LDAEMPAISSGLSPEKRGINRALLEAVATRLVSGREAINDYVKCSLIYQTMGEKELFSLV 644
Query: 1001 QDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD 1060
+L L L D + T LG+A S+ PE+ L V D+L RA + FV+ +
Sbjct: 645 DSTLNELVDANLLNLRFDGS-FEPTQLGQAIVASAFSPEDGLFVHDELKRALQAFVMDGE 703
Query: 1061 LHLVYLSTPIN--VEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAHGAPM 1115
+H+ Y+ P+ V+ DW + + E++ LD S +GV+ + MA G
Sbjct: 704 MHVFYMFAPLQSGTGVDIDWPTFRD---EMNKLDDSGIRALQFMGVNPGLVNSMAQG--- 757
Query: 1116 RISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVC 1175
R S K D R +R Y A L L E PV V
Sbjct: 758 ------RSSIK-------------------DTILARTYQRAYTAFQLRDLSNEVPVSAVA 792
Query: 1176 ETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTT 1235
+ RG VQ L + FA+ + FC+R+GW L ++ ++R+ G RA+++EL
Sbjct: 793 HKYSTPRGNVQNLSQICHGFAAGMVKFCQRMGWEMLAVVLDHMRDRLQAGARADLLELAQ 852
Query: 1236 IPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
+ YVK AR L++ G +T A+AEA ++V L
Sbjct: 853 VTYVKSRTARLLWENGFKTLRALAEADARDLVPVLM 888
>gi|392868317|gb|EAS34087.2| DNA-directed DNA polymerase theta [Coccidioides immitis RS]
Length = 937
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 274/816 (33%), Positives = 418/816 (51%), Gaps = 111/816 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + ++K G++ +YPWQ CL G L +NLVY A T GKS VA++LML+R+I
Sbjct: 131 LPESLVANFEKLGVNCIYPWQASCLLGRGHLTAEKNLVYSAPTGGGKSLVADVLMLKRII 190
Query: 568 STG-KMALLVLPYVSICAEKAEHLEVLLEPLGRH-----------------------VRS 603
K A+LVLPYV+I EK + L L+E + + V
Sbjct: 191 DDPHKKAILVLPYVAIVQEKLKWLRRLVEGVDKRIDALVQVDGSYPSRAKFLQSSIRVTG 250
Query: 604 YYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLL 663
++G + DT +AVCTIEKAN LVN +EE ++ E+G++V+DELHM+ D++RGYL+
Sbjct: 251 FFGGSKSRATWSDTDIAVCTIEKANMLVNAAIEECKIDELGVVVLDELHMLDDEHRGYLI 310
Query: 664 ELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAAL 723
E++++KL + +QIVGMSAT+ N +A WL A
Sbjct: 311 EIMISKLMLLQQD-----------------------IQIVGMSATLSNTELLAKWLHANY 347
Query: 724 YETNFRPVPLEEYIKVGNAIY--SKKMDVVRTILTAANLGG------------------- 762
Y + +RP+P++E++ N +Y K D +RT + G
Sbjct: 348 YISRYRPIPIQEFLVYDNLVYPAGKTKDFLRTAVVLNKSGATKTEALAARIIDKSVYKEL 407
Query: 763 KDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDI 820
++P + +V L E G+ L+FC SR+ C A +S + S+ + +D+
Sbjct: 408 ENPIINAMVSLALETAMSGYGALVFCGSRQACHMNALIISDAMPDDSMLDSDVLEKRMDL 467
Query: 821 TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLA 880
+ + +L P GLDPV E+T+ GVA+HHAGLT EER+++ Y G+++VL AT +LA
Sbjct: 468 IAGLQSL---PCGLDPVFEKTVIKGVAFHHAGLTAEERDLIAEGYDMGILKVLVATCSLA 524
Query: 881 AGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGL 940
AG+NLPARRVI R+GRD + RQM GRAGR G D GE+ L C ++++ ++ L
Sbjct: 525 AGINLPARRVILCGARMGRDLVGPAMLRQMRGRAGRKGKDEIGETFLCCTADDLEAVLDL 584
Query: 941 LNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSA 1000
L+ P + S LS +K G+ A+LE VA ++ E I+ YV+C+L+ T +++
Sbjct: 585 LDAEMPAISSGLSPEKRGINRALLEAVATRLLSGREAINDYVKCSLIYQTMGEKELFSLV 644
Query: 1001 QDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD 1060
+L L L D + T LG+A S+ PE+ L V D+L RA + FV+ +
Sbjct: 645 DSTLNELVDANLLNLRFDGS-FEPTQLGQAIVASAFSPEDGLFVHDELKRALQAFVMDGE 703
Query: 1061 LHLVYLSTPIN--VEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAHGAPM 1115
+H+ Y+ P+ V+ DW + + E++ LD S +GV+ + MA G
Sbjct: 704 MHVFYMFAPLQSGTGVDIDWPTFRD---EMNKLDDSGIRALQFMGVNPGLVNSMAQG--- 757
Query: 1116 RISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVC 1175
R S K D R +R Y A L L E PV V
Sbjct: 758 ------RSSIK-------------------DPILARTYQRAYTAFQLRDLSNEVPVSAVA 792
Query: 1176 ETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTT 1235
+ RG VQ L + FA+ + FC+R+GW L ++ ++R+ G RA+++EL
Sbjct: 793 HKYSTPRGNVQNLSQICHGFAAGMVKFCQRMGWEMLAVVLDHMRDRLQAGARADLLELAQ 852
Query: 1236 IPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
+ YVK AR L++ G +T A+AEA ++V L
Sbjct: 853 VTYVKSRTARLLWENGFKTLRALAEADARDLVPVLM 888
>gi|367019870|ref|XP_003659220.1| hypothetical protein MYCTH_2114843 [Myceliophthora thermophila ATCC
42464]
gi|347006487|gb|AEO53975.1| hypothetical protein MYCTH_2114843 [Myceliophthora thermophila ATCC
42464]
Length = 940
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 282/841 (33%), Positives = 432/841 (51%), Gaps = 110/841 (13%)
Query: 490 AGTPSSSGMLKDCLDLSS---WLPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLV 545
A TP+S+ + L LS LP ++ + + GI +YPWQ +CL G+L+ +NLV
Sbjct: 110 AATPTST--VDPLLSLSHPAYGLPEQLVANFAALGIKAIYPWQRQCLCGPGLLEGEKNLV 167
Query: 546 YCASTSAGKSFVAEILMLRRLI-STGKMALLVLPYVSICAEKAEHLEVLLEPLGR----- 599
Y A T GKS VA++LMLRR++ A++VLPYV++ EK L ++ + R
Sbjct: 168 YSAPTGGGKSLVADVLMLRRVLEDRAAKAIVVLPYVALVQEKVRWLRSIVSGIPRADAAN 227
Query: 600 --------------------HVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGR 639
V ++G + D +AVCTIEKANSLVN +E+
Sbjct: 228 LDMPDDSHGFWAPRADKDTIRVVGFFGGSKIRASWADFDIAVCTIEKANSLVNTAIEDCS 287
Query: 640 LSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHG 699
+S + +V+DE HM+ D RGYL+EL+ TKL
Sbjct: 288 ISSLRAVVLDECHMIDDDYRGYLIELMTTKLLCLG-----------------------QP 324
Query: 700 LQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAAN 759
LQI+GMSAT+ N+ + WLQ YET +RPVP+EE++ IY + +AA
Sbjct: 325 LQIIGMSATLTNIELLKRWLQGHSYETRYRPVPIEEHLVCDGKIYGSETTAALLKASAAQ 384
Query: 760 --------LGGKDP-------DH----------IVELCDEVVQEGHSVLIFCSSRKGCES 794
L G P DH +V L +E V+ G+ VL+F SSR GCES
Sbjct: 385 PDTGSQCGLPGLQPMRLIKPSDHKELADPVRNAVVALANETVRAGYGVLVFASSRAGCES 444
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
A +S+ L F+ + +D+ + LR GLDP LE+T+P GVA+HHAGLT
Sbjct: 445 DALLISRVLPTFAEADPLIQEKRLDL---LGDLRSLSTGLDPKLEQTIPFGVAFHHAGLT 501
Query: 855 VEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA 914
EERE++ Y +G+++V AT +LAAG+NLPARRVI R+GRD + RQM GRA
Sbjct: 502 TEERELIANAYDQGVLKVCVATCSLAAGINLPARRVILHGARMGRDLVGPAMLRQMRGRA 561
Query: 915 GRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQT 974
GR G D GE+ L C+ ++ ++ L++ P + SCL DK + A+LE++A G+ +
Sbjct: 562 GRKGKDEVGETYLCCRRSDLDAVVDLMHAELPQVSSCLISDKRRIQRALLEIIAIGLATS 621
Query: 975 AEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGS 1034
E + YV TLL + + + + + S+ L +F+ +E + T LG+A S
Sbjct: 622 RESLDDYVSRTLLAYSTEPRSIQEHVEASIAELQEMQFVTVDEYGS-FEATRLGKAIVAS 680
Query: 1035 SLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPIN--VEVEPDWELYYERFLELSALD 1092
SL PE+ + + D+L RA + FV+ D+H++Y TP++ V +W+ ++ E+ LD
Sbjct: 681 SLDPEDGIFIHDELKRALQAFVMDGDMHVLYHFTPVHDLGGVMVNWKAFWN---EIQQLD 737
Query: 1093 QSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRV 1152
S G+ +L+ + P+ + + LR GI + + + R
Sbjct: 738 DS-----GLRVMHLLGL---KPVVVDNMLRG-------------GILRESTAEEKEMARR 776
Query: 1153 CKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLE 1212
+RFY+AL L L E P+ V E + + RG +Q L + FA+ + FCE +GW +
Sbjct: 777 YRRFYLALQLRDLCNEMPIHRVAEKYDMPRGSIQNLAQTCQGFAAGMIKFCEMMGWGAMA 836
Query: 1213 GLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFE 1272
+ F R++ G RA+++ L+ I +VK AR + G +T A+A A E++ L +
Sbjct: 837 AALDHFSERLNAGARADLLALSKITFVKSRTARIFWDNGFKTIAAVANAHPEELLPVLMQ 896
Query: 1273 S 1273
+
Sbjct: 897 A 897
>gi|348532301|ref|XP_003453645.1| PREDICTED: helicase POLQ [Oreochromis niloticus]
Length = 993
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 285/823 (34%), Positives = 452/823 (54%), Gaps = 88/823 (10%)
Query: 473 SPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSW--LPSEICSI-YKKRGISKLYPWQ 529
S T ++K+ V +E+ + A + + D DL + LPS++ + +K RGI LY WQ
Sbjct: 191 SRTAMLKEAVVSEEINVA-MQAMETVSADMPDLGPFFGLPSKVKELMFKLRGIQSLYDWQ 249
Query: 530 VECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEH 589
CL++D V QR+NL+Y TS GK+ VAEIL+LR L+ K L +LPY+S+ EK
Sbjct: 250 QTCLNLDCVQQRKNLIYSLPTSGGKTLVAEILILRELLCRRKDCLFILPYISLVQEKVRG 309
Query: 590 LEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTIEKANSLVNRMLEEGRLSEIGII 646
L L V Y G++G K TS+ + TIEK +SLVN ++E RL +G++
Sbjct: 310 LASFGLELDFMVEEYAGSKGRFPPVKRRNKTSLYIATIEKGHSLVNSLIETSRLDNLGLV 369
Query: 647 VIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMS 706
V+DELHM+ D +RG ++E+ LTK++Y S T+ QI+GMS
Sbjct: 370 VVDELHMLGDGSRGAIIEMTLTKVQYV-------------SKTT----------QIIGMS 406
Query: 707 ATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS---KKMDVVR-----TILTAA 758
AT+ N+ + +L+A Y NFRPV L+E++K+ + IY K+ + R ++
Sbjct: 407 ATLGNIKDLQTFLRAENYTNNFRPVQLKEFVKLHDTIYEVDPKEENCFRFSRLLNFKYSS 466
Query: 759 NLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFI 818
+ DPDHI+ L EV+ HS L+FC ++K CE+ A + K+LK+ + H + + +
Sbjct: 467 TMQKIDPDHIIALVTEVI-PAHSCLLFCPTKKNCENVAAMICKYLKEDFLR-HREEEKGV 524
Query: 819 DITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATST 878
+ D+ L PVL+ T+P GVAYHH+GLT EER++VE Y G++ +LT TST
Sbjct: 525 LLRELRDS---GNGSLCPVLKVTVPYGVAYHHSGLTSEERKLVEEAYSSGVLCLLTCTST 581
Query: 879 LAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIM 938
LAAG+NLPARRVI R P + DF+ ++Y+QM GRAGR GID+ GES+LI + ++
Sbjct: 582 LAAGINLPARRVILRSPYVATDFLKRSQYKQMVGRAGRAGIDSVGESILILQEKDRNMAK 641
Query: 939 GLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLL----NST 990
L+ C P+ SC S +D G+ +L ++ I + E + +++ TLL
Sbjct: 642 TLV---CAPMESCYSNLMHDDGKGLLSLVLSLIGLNITSSVEQLQDFLQGTLLFVQWQQL 698
Query: 991 KPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSR 1050
+ ++++ Q + L ++ + D++ T LG+A + +S+ + ++ DLS+
Sbjct: 699 CVERSLLEAVQQCVDVLKEKELI--TVDSQSLRVTKLGKATYKASVDLTYAEVLYKDLSK 756
Query: 1051 AREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMR 1108
E +L S LHLVYL TP ++ + +P+W +++ +F LS +Q + VGV E ++ R
Sbjct: 757 GLESLLLNSYLHLVYLVTPYDLIDQCKPNWMIFFRQFTLLSVAEQKMSAAVGVPESFVAR 816
Query: 1109 MAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQE 1168
A G ++ KG++ + +R Y+AL+L L++E
Sbjct: 817 KAAGQTVK---------KGVN--------------------VAAVRRMYLALVLFSLLKE 847
Query: 1169 TPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVR 1227
T V V E F+V+RG VQ L ++ F S V F E L ++ L+A+ R+S+ V+
Sbjct: 848 TDVWSVSERFQVSRGFVQTLLGSSSAFCSCVLHFTEELEEFWPFRALLAELTRRLSYCVK 907
Query: 1228 AEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
AE++ L + V SRA+ LY AG +T +A A + + A+
Sbjct: 908 AELIPLMEVAGVLESRAKQLYAAGYKTLTHLANADPAALCTAI 950
>gi|325092933|gb|EGC46243.1| DNA-directed DNA polymerase theta [Ajellomyces capsulatus H88]
Length = 934
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 266/814 (32%), Positives = 420/814 (51%), Gaps = 106/814 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ + + G++ +YPWQ CL G L +NLVY A T GKS VA++LML+R+I
Sbjct: 132 LPPQLVANFASLGVNCIYPWQASCLLGRGHLTAEKNLVYSAPTGGGKSLVADVLMLKRVI 191
Query: 568 -STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK----------- 615
K A+LVLPYV++ EK + L ++E + ++V S PK
Sbjct: 192 EDPAKRAILVLPYVALVQEKLKWLRRVVEGVDKNVDMPTTADEASSAPKWKQPQKSIRVT 251
Query: 616 -------------DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
DT +AVCTIEKANSLVN +EE ++++G++V+DELHM+ D++RGYL
Sbjct: 252 GFFGGSKTRATWTDTDIAVCTIEKANSLVNAAIEECSINDLGVVVLDELHMLDDEHRGYL 311
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAA 722
+E+++TKL + +QIVGMSAT+ N +A WL A
Sbjct: 312 IEIMVTKLLLLQQD-----------------------IQIVGMSATLSNTEVLAKWLHAN 348
Query: 723 LYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTIL------TAAN--------------- 759
Y + +RP+ ++E++ NAIY + + RT + ++ N
Sbjct: 349 YYISKYRPILIQEHLVYNNAIYPATSSKEFFRTAMQLNKPDSSPNYSLACRIIDRSMHKE 408
Query: 760 LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFID 819
LG + +V L E G+ L+FC R+ C+S A VS + + + +D
Sbjct: 409 LGNPTANAMVSLALETALSGYGALVFCGGRQACQSNAVLVSHAMPDETALDNDLLERRMD 468
Query: 820 ITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTL 879
+ + + +L P GLDPVL+ T+ GVA+HHAGLT EER+++ Y KG +RVL AT +L
Sbjct: 469 LIAGLQSL---PCGLDPVLQMTVIKGVAFHHAGLTTEERDLIAEAYDKGTLRVLIATCSL 525
Query: 880 AAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMG 939
AAG+NLPARRVI R+GRD + RQM GRAGR G D GE+ L C+ ++++ +
Sbjct: 526 AAGINLPARRVILCGARMGRDLVGPAMLRQMRGRAGRKGKDEVGETYLCCQKDDLEAVAE 585
Query: 940 LLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKS 999
LL P + S L+ +K G+ A+LE +A +V + E I+ YV CTLL ++
Sbjct: 586 LLEAEMPAIASGLTPEKRGIKRALLEAIATRLVSSRESINEYVMCTLLYQNMEAAELFSM 645
Query: 1000 AQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLAS 1059
+L L ++ E + Y T LG+A SSL PE+ + + D+L RA + FV+
Sbjct: 646 VDKTLEDLVDNGLVDL-EQAESYEPTRLGQAVVSSSLSPEDGIFIHDELKRALKSFVMDG 704
Query: 1060 DLHLVYLSTPI--NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRI 1117
++H+ Y+ P+ + + DW ++ ++ L VGV ++ +MA
Sbjct: 705 EMHIFYMFAPLQNSSPTDIDWSIFRDQMNNLDESGIRALQFVGVEPAFVNKMAQSG---- 760
Query: 1118 SSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCET 1177
++++D T R+ +R Y A L L E P+ + +
Sbjct: 761 -TRIKDETIA-----------------------RIYQRAYTAFQLRDLSNEVPISTIAQR 796
Query: 1178 FKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIP 1237
+ + RG VQ L + FA+ + FC+R+GW L ++ ++R+ G RA+++E+ +
Sbjct: 797 YNIPRGNVQTLAQTCHGFAAGIVKFCQRMGWDMLAVVLDHMRDRLHAGARADLLEMAQVA 856
Query: 1238 YVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
YVK AR L++ G ++ A+AEA ++V L
Sbjct: 857 YVKSRTARLLWENGFKSLRALAEADPKDLVPVLM 890
>gi|240279802|gb|EER43307.1| DNA polymerase I [Ajellomyces capsulatus H143]
Length = 941
Score = 439 bits (1129), Expect = e-119, Method: Compositional matrix adjust.
Identities = 264/814 (32%), Positives = 418/814 (51%), Gaps = 106/814 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ + + G++ +YPWQ CL G L +NLVY A T GKS VA++LML+R+I
Sbjct: 142 LPPQLVANFASLGVNCIYPWQASCLLGRGHLTAEKNLVYSAPTGGGKSLVADVLMLKRVI 201
Query: 568 -STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHV------------------------R 602
K A+LVLPYV++ EK + L ++E + ++V
Sbjct: 202 EDPAKRAILVLPYVALVQEKLKWLRRVVEGVDKNVDMSTTAGEASSAPKWKQPQKSIRVT 261
Query: 603 SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
++G + DT +AVCTIEKANSLVN +EE ++++G++V+DELHM+ D++RGYL
Sbjct: 262 GFFGGSKTRATWTDTDIAVCTIEKANSLVNAAIEECSINDLGVVVLDELHMLDDEHRGYL 321
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAA 722
+E+++TKL + +QIVGMSAT+ N +A WL A
Sbjct: 322 IEIMVTKLLLLQQD-----------------------IQIVGMSATLSNTEVLAKWLHAN 358
Query: 723 LYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTIL------TAAN--------------- 759
Y + +RP+ ++E++ NAIY + + RT + ++ N
Sbjct: 359 YYISKYRPILIQEHLVYNNAIYPATSSKEFFRTAMQLNKPDSSPNYSLACRIIDRSMHKE 418
Query: 760 LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFID 819
LG + +V L E G+ L+FC R+ C+S A VS + + + +D
Sbjct: 419 LGNPTANAMVSLALETALSGYGALVFCGGRQACQSNAVLVSHAMPDETALDNDLLERRMD 478
Query: 820 ITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTL 879
+ + + +L P GLDPVL+ T+ GVA+HHAGLT EER+++ Y KG +RVL AT +L
Sbjct: 479 LIAGLQSL---PCGLDPVLQMTVIKGVAFHHAGLTTEERDLIAEAYDKGTLRVLIATCSL 535
Query: 880 AAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMG 939
AAG+NLPARRVI R+GRD + RQM GRAGR G D GE+ L C+ ++++ +
Sbjct: 536 AAGINLPARRVILCGARMGRDLVGPAMLRQMRGRAGRKGKDEVGETYLCCQKDDLEAVAE 595
Query: 940 LLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKS 999
LL P + S L+ +K G+ A+LE +A +V + E I+ YV CTLL ++
Sbjct: 596 LLEAEMPAIASGLTPEKRGIKRALLEAIATRLVSSRESINEYVMCTLLYQNMEAAELFSM 655
Query: 1000 AQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLAS 1059
+L L ++ E + Y T LG+A SSL PE+ + + D+L RA + FV+
Sbjct: 656 VDKTLEDLVDNGLVDL-EQAESYEPTRLGQAVVSSSLSPEDGIFIHDELKRALKSFVMDG 714
Query: 1060 DLHLVYLSTPI--NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRI 1117
++H+ Y+ P+ + + DW ++ ++ L VGV ++ +MA
Sbjct: 715 EMHIFYMFAPLQNSSPTDIDWSIFRDQMNNLDESGIRALQFVGVEPAFVNKMAQ------ 768
Query: 1118 SSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCET 1177
S + D R+ +R Y A L L E P+ + +
Sbjct: 769 ----------------------SGTRIKDETIARIYQRAYTAFQLRDLSNEVPISTIAQR 806
Query: 1178 FKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIP 1237
+ + RG VQ L + FA+ + FC+R+GW L ++ ++R+ G RA+++E+ +
Sbjct: 807 YNIPRGNVQTLAQTCHGFAAGIVKFCQRMGWDMLAVVLDHMRDRLHAGARADLLEMAQVA 866
Query: 1238 YVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
YVK AR L++ G ++ A+AEA ++V L
Sbjct: 867 YVKSRTARLLWENGFKSLRALAEADPKDLVPVLM 900
>gi|326918720|ref|XP_003205636.1| PREDICTED: helicase POLQ-like [Meleagris gallopavo]
Length = 1028
Score = 439 bits (1128), Expect = e-119, Method: Compositional matrix adjust.
Identities = 284/827 (34%), Positives = 446/827 (53%), Gaps = 102/827 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ + ++ RGI LY WQ +CL + + QR+NL+Y TS GK+ VAEIL+L+ L+
Sbjct: 257 LPSKVKHLLRQFRGIETLYEWQHDCLTLKSLQQRKNLIYSLPTSGGKTLVAEILILQELL 316
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + T
Sbjct: 317 CRQKDVLMILPYVAIVQEKVWGLSSFGIELGFLVEEYAGSKGRFPPIKRRIKKSLYIATT 376
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK ++LVN ++E R++++G++V+DELHM+ + +RG LE+ L K+ +A+
Sbjct: 377 EKGHALVNSLIETDRINDLGLVVVDELHMIGEGSRGATLEMTLAKILHAS---------- 426
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
+ IVGMSAT+ NV + +LQA Y NFRPV L+EYIK+ + IY
Sbjct: 427 -------------KNIHIVGMSATLNNVGDLQKFLQAEYYTKNFRPVELKEYIKIKDTIY 473
Query: 745 ---SK-----KMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
SK + +++L DPDHI+ L EV+ + +S LIFC ++K CE+ A
Sbjct: 474 EVDSKAENGFTFSRLLNFKYSSSLEKADPDHIIALVTEVIPK-YSCLIFCPTKKNCENVA 532
Query: 797 RHVSKFL-KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTV 855
V K+L K+F + + I I CP VL +T+P G+AYHH+GLT
Sbjct: 533 TMVCKYLNKEFRTHREKEKQDLIKNLKDIGNGSICP-----VLRQTIPFGIAYHHSGLTN 587
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+ +E Y +G++ +L T+TLAAGVNLPARRVI R P + +F+ +Y+QM GRAG
Sbjct: 588 DERKNIEEAYSRGVLCLLACTATLAAGVNLPARRVILRAPYVASEFLKKNQYKQMIGRAG 647
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSC----LSEDKNGMTHAILEVVAGGI 971
R GID+ GES+LI + ++ + L+ PL +C L E NGM + +L +V I
Sbjct: 648 RAGIDSAGESILIVQEKDKHLVQDLIT---SPLENCYSNLLPESTNGMQYLLLSLVGLKI 704
Query: 972 VQTAEDIHRYVRCTLLNST-------KPFQDVVKSAQDSL--RWLCHRKFLEWNEDTK-L 1021
T E+++ ++ TLL K ++V+ ++L + L RK +E +++ +
Sbjct: 705 AVTQEEVYSFMCHTLLGVQQQLLLKEKSLSEIVRDELENLIEKGLLERKIMEKDQNPRST 764
Query: 1022 YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWE 1079
+ T LG+A + S+ ++ +L + EG VL S LHL+YL+TP ++ PDW
Sbjct: 765 LTITLLGKATYKGSIDVSYCNLLYKELRKGLEGLVLESSLHLLYLATPYDMVSNCSPDWM 824
Query: 1080 LYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGIT 1139
+Y +F +LS+ +Q V + VGV E ++ + A G +R K D+
Sbjct: 825 IYLRQFNQLSSAEQRVVDMVGVPESFIAKKASGQAIR---KNVDTA-------------- 867
Query: 1140 SNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMV 1199
V R Y++ +L L++ET + + E F ++RG VQ L +A FAS V
Sbjct: 868 ------------VVNRLYLSFVLYALLKETNIWSISEKFNMSRGYVQNLLTSAASFASCV 915
Query: 1200 SVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAI 1258
FCE L ++ + L+ + R+++ V+ E++ L + V +RA+ LY AG +T +
Sbjct: 916 LHFCEELEEFWVYKALLTELTKRLTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHL 975
Query: 1259 AEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
A A+ +VK I RR AK++ + A+ ++ EKAE
Sbjct: 976 ANANPETLVKT-------IEHLSRR----QAKQMVSSAKMLLTEKAE 1011
>gi|395542204|ref|XP_003773024.1| PREDICTED: helicase POLQ-like [Sarcophilus harrisii]
Length = 1047
Score = 438 bits (1127), Expect = e-119, Method: Compositional matrix adjust.
Identities = 292/828 (35%), Positives = 445/828 (53%), Gaps = 103/828 (12%)
Query: 509 LPSEICSIY-KKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ ++ + +GI KLY WQ CL + + QR+NL+Y TS GK+ VAEILML+ L+
Sbjct: 261 LPSKVRDLFVQYKGIKKLYDWQHTCLTLTCLQQRKNLIYSLPTSGGKTLVAEILMLQELL 320
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 321 CRQKNVLMILPYVAIVQEKISSLSNFGIELGFFVEEYAGSKGRVPPIKRRGKKSLYIATI 380
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK + LVN ++EEGR++E+G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 381 EKGHGLVNSLIEEGRINELGLVVVDELHMIGEGSRGAILEITLAKILY-----TSKTT-- 433
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
QI+GMSAT+ NV + ++L A Y + FRPV L+EY+K+ + IY
Sbjct: 434 ----------------QIIGMSATLNNVEELQEFLNAEYYTSKFRPVELKEYLKINDTIY 477
Query: 745 -----SKKMDVVRTILT---AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
++K +L + +L DPDH+V L EV+ +S L+FC ++K CE+ A
Sbjct: 478 EVDIKAEKGYTFSRLLKCKYSDHLKKMDPDHLVALVTEVIP-NYSCLVFCPTKKNCENVA 536
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ KFL K + + E D + L+ G L PVL+ T+P G+AYHH+GLT
Sbjct: 537 DMICKFLNKDYLK--HREKEKCDF---LKNLKNVSNGSLCPVLKRTVPFGIAYHHSGLTS 591
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+V+E Y G++ +LT TSTLAAGVNLPARRVI R P I F+ +Y+QM GRAG
Sbjct: 592 DERKVLEEAYATGVLCLLTCTSTLAAGVNLPARRVILRAPYIATQFLKRNQYQQMIGRAG 651
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GIDT GES+LI + ++ ++ L+N PL +C S E G+ +L ++ I
Sbjct: 652 RAGIDTVGESILILQEKDKHLVLNLVN---SPLENCYSHLGQEITKGIQSLLLSLIGLKI 708
Query: 972 VQTAEDIHRYVRCTL-------LNSTKPFQDVVKSAQDSL--RWLCHRKFLEWNEDTKL- 1021
+ E I+ ++ T L+ K ++ + A SL + L ++ + NE+
Sbjct: 709 AKNLEGIYHFMCATFFGIQQKRLSEEKSLWEICRKALASLMEKGLLQKRSVCKNEEESQC 768
Query: 1022 -YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
T LG+A+ +L + DL + EG VL S LHL+YL+TP ++ + PDW
Sbjct: 769 ELQITKLGQASLKGTLDLAYCGTLYKDLKKGLEGLVLESYLHLIYLTTPYDMVSQCRPDW 828
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+Y +F L++ +Q V VGVSE ++ + A G ++ +D +
Sbjct: 829 MIYLRQFDHLNSGEQKVAAIVGVSESFITKKASGQAIK-----KDVDRN----------- 872
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
+ R Y++L+L L++ET V V E F ++RG VQ L A F S
Sbjct: 873 -------------IVNRLYLSLVLFTLLKETNVWRVSEKFNMSRGYVQNLLNGAASFCSC 919
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FCE L ++ L+ + ++S+ V+A++V L I V SRA+ LY AG +T
Sbjct: 920 VLHFCEELEEFWVYRALLTELTKKLSYCVKADLVPLMEITGVLESRAKQLYDAGYKTVTH 979
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A +++ I RR AK+I + A+ ++ EKAE
Sbjct: 980 LANADPEVLIRT-------INHLSRR----QAKQIVSSAKMLLNEKAE 1016
>gi|242803099|ref|XP_002484105.1| DNA-directed DNA polymerase theta, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717450|gb|EED16871.1| DNA-directed DNA polymerase theta, putative [Talaromyces stipitatus
ATCC 10500]
Length = 946
Score = 438 bits (1126), Expect = e-119, Method: Compositional matrix adjust.
Identities = 270/841 (32%), Positives = 432/841 (51%), Gaps = 107/841 (12%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + ++ GI +YPWQ CL G L +NL+Y A T GKS VA++LML+R+I
Sbjct: 140 LPPALVANFQAVGIHSIYPWQASCLLGRGHLTAEKNLLYTAPTGGGKSLVADVLMLKRVI 199
Query: 568 STG-KMALLVLPYVSICAEKAEHLEVLLEPLGRHVRS-------------------YYGN 607
+ A+LVLPY+++ EK + L +++ + ++V + ++G
Sbjct: 200 ENPHRKAILVLPYIALVQEKLKWLRRIVQDVEKNVDTPDSAKQKWKQPSKEIRVTGFFGG 259
Query: 608 QGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLL 667
+ DT +AVCTIEKAN+LVN + E + ++ ++V+DE+HM+ D +RGYLLEL++
Sbjct: 260 SKSRATWADTDIAVCTIEKANALVNTAIAECNIDDLAVVVVDEIHMLDDDSRGYLLELMV 319
Query: 668 TKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETN 727
TKL + +QI+GMSAT+ N +A+WL+A+ + +
Sbjct: 320 TKLLLLQQD-----------------------IQIIGMSATLSNTELLAEWLRASFHAST 356
Query: 728 FRPVPLEEYIKVGNAIY-----------SKKMDVVRTILTAANLGGKDP---------DH 767
RPVP+EEY+ N+IY + K+ V+ + + P +
Sbjct: 357 HRPVPIEEYLVYENSIYPAISSKEFFQTATKLQSVQDTVPPCRRIDQSPFKALSHPTANA 416
Query: 768 IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDAL 827
+V L E G L+FC SR C+ A+ +S+ + S +D+ + +L
Sbjct: 417 MVSLAIETATAGFGALVFCGSRHACQMNAQLISEAMPSPSTLDSELLERRLDLLDELGSL 476
Query: 828 RRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPA 887
P GLDP + T+ GVA+HHAGLT EER++V Y +G ++V+ AT +LAAGVNLPA
Sbjct: 477 ---PCGLDPAFQNTIIKGVAFHHAGLTTEERDLVAEAYDQGTIKVIVATCSLAAGVNLPA 533
Query: 888 RRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPP 947
RRVI + R+GRD + RQM GRAGR G DT GE+ LIC+ +++ I + + P
Sbjct: 534 RRVIMQGARMGRDIVGPALLRQMRGRAGRKGKDTVGETYLICQQADLEAISEIWDAETPA 593
Query: 948 LHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWL 1007
+ SCL++D G+ A+LE +A +V E I ++RCTLL T+ ++ K SL+ L
Sbjct: 594 IDSCLAQDNKGVKRALLEGIATRLVSGCEAIDEFMRCTLLCKTRSEAEMEKLIDSSLQEL 653
Query: 1008 CHRKFLEWNED-TKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
+ + +D Y +T LG A SS P++ + V ++L RA + FV+ ++H+ Y+
Sbjct: 654 IDTELIHLRDDGNNSYESTKLGAAIVASSFAPDDGVFVYEELKRALQAFVMDGEMHIFYM 713
Query: 1067 STPINVEVEP--DWELYYERFLELSALDQSVGNQ---VGVSEPYLMRMAHGAPMRISSKL 1121
TP++V + DW ++ + +L LD+S VGV ++ M H
Sbjct: 714 FTPLSVAMNTNIDWLIFRD---QLDLLDESGIRALLFVGVQPGFVNNMVH---------- 760
Query: 1122 RDSTKGLHGKLEYRLGITSNNMLSD----AQTLRVCKRFYVALILSRLVQETPVLEVCET 1177
T N D Q R+ +R Y A L L E P+ +
Sbjct: 761 -----------------TGRNFKEDDPKQQQLSRIYRRAYAAFQLRDLCNEVPLSTIASR 803
Query: 1178 FKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIP 1237
+ V RG+VQ L + FA+ + FC+R+GW L ++ ++R+ G R +++E+ +
Sbjct: 804 YNVPRGIVQTLAQTCHGFAAGMVKFCQRMGWGMLAVVLEHMRDRLQAGARDDLLEMAQVT 863
Query: 1238 YVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGAR 1297
+VK AR L++ G R+ A+A A +IV L + S +++Q + V + AR
Sbjct: 864 HVKSWTARLLWENGFRSVRALASADAKDIVPVLMMARSRKSQSQTNTEKEVERHAAKLAR 923
Query: 1298 K 1298
K
Sbjct: 924 K 924
>gi|311262877|ref|XP_003129397.1| PREDICTED: helicase, POLQ-like [Sus scrofa]
Length = 1119
Score = 437 bits (1125), Expect = e-119, Method: Compositional matrix adjust.
Identities = 291/844 (34%), Positives = 444/844 (52%), Gaps = 123/844 (14%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + RGI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 325 LPSKVRDLYAQFRGIEKLYEWQHTCLTLKSVQERKNLIYSLPTSGGKTLVAEILMLQELL 384
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K AL++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 385 CRRKDALMILPYVAIVQEKIAGLSSFGIELGFFVEEYAGSKG--KFPPIKRREKKSLYIA 442
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 443 TIEKGHSLVNSLIETGRIGGLGLVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT 497
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QIVGMSAT+ NV + +L+A Y + FRPV L+EY+K+ +
Sbjct: 498 ------------------QIVGMSATLNNVEDLQAFLRAEYYSSWFRPVELKEYLKINDT 539
Query: 743 IYS------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY M R + + L DPDH+V L EV+ HS L+FC ++K CE+
Sbjct: 540 IYEVDSKAENGMTFSRLLNYKYSDTLKKLDPDHLVALVTEVIP-NHSCLVFCPTKKNCEN 598
Query: 795 TARHVSKFL-KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGL 853
A + K L K++ + E + AI CP VL+ T+P GVAYHH+GL
Sbjct: 599 VAEMICKILSKEYLKHREKEKHELLKNLKAISGGSVCP-----VLKHTIPFGVAYHHSGL 653
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +ER+++E + G++ +LT TSTLAAGVNLPA+RVI R P + ++F+ +Y+QM GR
Sbjct: 654 TNDERKLLEEAHSAGVLCLLTCTSTLAAGVNLPAQRVILRAPYVAKEFLKRNQYKQMIGR 713
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GID+ GES+LI + ++ ++++ L++ PL +C S E G+ L ++
Sbjct: 714 AGRAGIDSVGESILIFQEKDKQQVLELISR---PLENCYSRLVQEFTKGIQTLFLSLIGL 770
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEWNEDTKL---- 1021
I T DI+ ++ T + KS +SLR+L + L+ +DT L
Sbjct: 771 KIATTLGDIYHFMSGTFFGVQQKILLKEKSLWEITVESLRYLTEKGLLQ--KDTVLTEKG 828
Query: 1022 -----------------YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLV 1064
+ T LGRA+F ++ I+ DL + EG VL S LHL+
Sbjct: 829 LLQKDTVQGSEEEFQYSFRITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLI 888
Query: 1065 YLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLR 1122
YL+TP ++ +PDW +Y+ +F +LS +Q+V VGVSE ++ + A G ++ K
Sbjct: 889 YLTTPYDMASRCDPDWMVYFRQFSQLSPAEQNVATLVGVSENFIGKKASGQAIK---KKV 945
Query: 1123 DSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVAR 1182
D T + R Y++ +L L++ET V V E F + R
Sbjct: 946 DKT--------------------------IVNRLYLSFVLYTLLKETSVWRVSEKFNMPR 979
Query: 1183 GMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKG 1241
G +Q L A F+S V FCE L ++ L+ + ++++ V+AE++ L + V
Sbjct: 980 GHIQNLLSGAAAFSSCVLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVAGVLE 1039
Query: 1242 SRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVL 1301
RA+ LY AG ++ +A A +++ I RR AK+I + A+ ++
Sbjct: 1040 GRAKQLYNAGYKSLAHLANADPEVLIRT-------IDHLSRR----QAKQIVSSAKMLLH 1088
Query: 1302 EKAE 1305
EKAE
Sbjct: 1089 EKAE 1092
>gi|52139047|gb|AAH82601.1| Helicase, mus308-like (Drosophila) [Mus musculus]
Length = 1069
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 291/829 (35%), Positives = 446/829 (53%), Gaps = 106/829 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 278 LPSKVRDLYVQLKGIKKLYDWQHTCLTLRSVQERKNLIYSLPTSGGKTLVAEILMLQELL 337
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 338 CRQKDVLMILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKG--RFPPIKRREKKSLYIA 395
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKA+SLVN ++E RLS +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 396 TIEKAHSLVNALIETSRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLY-----TSKTT 450
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +L+A Y + FRPV L+E++KV +
Sbjct: 451 ------------------QIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDT 492
Query: 743 IY------SKKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY + M R + + L DPD +V L EV+ +S L+FC S+K CE+
Sbjct: 493 IYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALVTEVIP-NYSCLVFCPSKKNCEN 551
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL K +N + I +LR G + PVL+ T+P G+AYHH+GL
Sbjct: 552 VAEMLCKFLSKDYLNHREKEK-----CEVIKSLRNIGNGKVCPVLKRTVPFGIAYHHSGL 606
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T EER+++E Y G++ +LT TSTLAAGVNLPARRVI R P + F+ +Y+QM GR
Sbjct: 607 TSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRSPYVANTFLKRNQYKQMVGR 666
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GIDT GES+L+ + ++ ++++ L++ PL +C S E G+ L ++
Sbjct: 667 AGRAGIDTAGESILLLQEKDKQQVLELIS---GPLETCCSHLVEEFTKGIQALFLSLIGL 723
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEW-----NEDTK 1020
I + DI++++ T + KS D+L L + L+ NE +
Sbjct: 724 KIAASLGDIYQFMSGTFFGVQQKILLKEKSLWEITVDALEHLTEKGLLQKDSCGDNEGLE 783
Query: 1021 L-YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPD 1077
+ T LG+A+F ++ + DL + EG VL S LHL+YL+TP ++ + EPD
Sbjct: 784 CHFRITKLGQASFKGAIDLAYCDTLYRDLKKGLEGLVLESLLHLIYLTTPYDLAAQSEPD 843
Query: 1078 WELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLG 1137
W +Y+++F +LS +Q+V +GVSE ++ + A G +R K D
Sbjct: 844 WMVYFKQFGQLSPTEQNVAALLGVSESFIGKKAAGQAVR---KKVDKN------------ 888
Query: 1138 ITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFAS 1197
V R Y++ +L L++ET V V E F + RG +Q L A F+S
Sbjct: 889 --------------VVNRLYLSFVLYSLLKETNVWSVSEKFNLPRGYIQNLLMGAASFSS 934
Query: 1198 MVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPL 1256
V FCE L ++ + L+ + ++++ V+AE++ L + V RA+ LY AG R+ +
Sbjct: 935 CVLHFCEELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYRSIM 994
Query: 1257 AIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +VK I RR A++I + A+ ++ EKAE
Sbjct: 995 HLANANPEVLVKT-------IDHLSRR----QARQIVSSAKMLLHEKAE 1032
>gi|50746585|ref|XP_420565.1| PREDICTED: helicase, POLQ-like [Gallus gallus]
Length = 1048
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 287/826 (34%), Positives = 442/826 (53%), Gaps = 102/826 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ + ++ RGI LY WQ +CL + + QR+NL+Y TS GK+ VAEIL+L+ L+
Sbjct: 279 LPSKVKHLLRQFRGIETLYEWQHDCLTLKSLQQRKNLIYSLPTSGGKTLVAEILILQELL 338
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L++LPYV+I EK L LG V Y G++G K S+ + TI
Sbjct: 339 CRQKDVLMILPYVAIVQEKVWGLSSFGIELGFLVEEYAGSKGRFPPIKRRIKKSLYIATI 398
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK ++LVN ++E R+ ++G++V+DELHM+ + +RG +LE+ L K+ YA+
Sbjct: 399 EKGHALVNSLIETDRIDDLGLVVVDELHMIGEGSRGAVLEMTLAKILYAS---------- 448
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
+VGMSAT+ NV + +LQA Y NFRPV L+EYIK+ + IY
Sbjct: 449 -------------KNTHVVGMSATLNNVGDLQKFLQAEYYTKNFRPVELKEYIKIRDTIY 495
Query: 745 ---SK-----KMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
SK + +++L DPDHIV L EV+ + +S LIFC ++K CE+ A
Sbjct: 496 EVDSKAENGFTFSRLLNFKYSSSLEKADPDHIVALVTEVIPK-YSCLIFCPTKKNCENVA 554
Query: 797 RHVSKFL-KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTV 855
V K+L K+F + + I I CP VL +T+P GVAYHH+GLT
Sbjct: 555 TMVCKYLNKEFRAHREKEKQDLIKNLKDIGNGSICP-----VLRQTIPFGVAYHHSGLTN 609
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER+ +E Y +G++ +L T+TLAAGVNLPARRVI R P + +F+ +Y+QM GRAG
Sbjct: 610 DERKSIEEAYSRGVLCLLACTATLAAGVNLPARRVILRAPYVASEFLKKNQYKQMIGRAG 669
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSC----LSEDKNGMTHAILEVVAGGI 971
R GID GES+L+ + ++ + L+ PL +C L E GM + +L +V I
Sbjct: 670 RAGIDNAGESILVVQEKDKHLVRDLITS---PLENCYSNLLPEITKGMQYLLLSLVGLKI 726
Query: 972 VQTAEDIHRYVRCTLLNST-------KPFQDVVKSAQDSL--RWLCHRKFLEWNEDTKLY 1022
T E+++ ++ TLL K ++V+ ++L + L K ++ N + L
Sbjct: 727 AVTQEEVYSFMCHTLLGVQQQLLLKEKSLSEIVRDELENLIEKGLLKGKIMDQNSKSTL- 785
Query: 1023 STTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWEL 1080
+ T LG+A + S+ ++ +L + EG VL S LHL+YL+TP ++ PDW +
Sbjct: 786 TVTLLGKATYKGSIDVSYCNLLYKELRKGLEGLVLESSLHLLYLATPYDMVSNCSPDWMI 845
Query: 1081 YYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITS 1140
Y +F +LS+ +Q V + VGV E ++ + A G +R K DST
Sbjct: 846 YLRQFNQLSSAEQKVADMVGVPESFIAKKASGQAIR---KNVDST--------------- 887
Query: 1141 NNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVS 1200
R Y++ +L L++ET V V E F ++RG VQ L +A FAS +
Sbjct: 888 -----------AVNRLYLSFVLYALLKETNVWSVSEKFNMSRGYVQNLLTSAASFASCIL 936
Query: 1201 VFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIA 1259
FCE L ++ + L+ + R+++ V+ E++ L + V +RA+ LY AG +T +A
Sbjct: 937 HFCEELEEFWVYKALLTELTKRLTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHLA 996
Query: 1260 EASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
A+ +VK I RR AK++ + A+ ++ EKAE
Sbjct: 997 NANPETLVKT-------IEHLSRR----QAKQMVSSAKMLLSEKAE 1031
>gi|124487403|ref|NP_001074576.1| helicase POLQ-like [Mus musculus]
gi|123792912|sp|Q2VPA6.2|HELQ_MOUSE RecName: Full=Helicase POLQ-like; AltName: Full=Mus308-like helicase;
AltName: Full=POLQ-like helicase
gi|115344367|gb|AAI09171.2| Helicase, mus308-like (Drosophila) [Mus musculus]
Length = 1069
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 291/829 (35%), Positives = 446/829 (53%), Gaps = 106/829 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 278 LPSKVRDLYVQLKGIKKLYDWQHTCLTLRSVQERKNLIYSLPTSGGKTLVAEILMLQELL 337
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 338 CRQKDVLMILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKG--RFPPIKRREKKSLYIA 395
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKA+SLVN ++E RLS +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 396 TIEKAHSLVNALIETSRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLY-----TSKTT 450
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +L+A Y + FRPV L+E++KV +
Sbjct: 451 ------------------QIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDT 492
Query: 743 IY------SKKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY + M R + + L DPD +V L EV+ +S L+FC S+K CE+
Sbjct: 493 IYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALVTEVIP-NYSCLVFCPSKKNCEN 551
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL K +N + I +LR G + PVL+ T+P G+AYHH+GL
Sbjct: 552 VAEMLCKFLSKDYLNHREKEK-----CEVIKSLRNIGNGKVCPVLKRTVPFGIAYHHSGL 606
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T EER+++E Y G++ +LT TSTLAAGVNLPARRVI R P + F+ +Y+QM GR
Sbjct: 607 TSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQYKQMVGR 666
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GIDT GES+L+ + ++ ++++ L++ PL +C S E G+ L ++
Sbjct: 667 AGRAGIDTAGESILLLQEKDKQQVLELIS---GPLETCCSHLVEEFTKGIQALFLSLIGL 723
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEW-----NEDTK 1020
I + DI++++ T + KS D+L L + L+ NE +
Sbjct: 724 KIAASLGDIYQFMSGTFFGVQQKILLKEKSLWEITVDALEHLTEKGLLQKDSCGDNEGLE 783
Query: 1021 L-YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPD 1077
+ T LG+A+F ++ + DL + EG VL S LHL+YL+TP ++ + EPD
Sbjct: 784 CHFRITKLGQASFKGAIDLAYCDTLYRDLKKGLEGLVLESLLHLIYLTTPYDLAAQSEPD 843
Query: 1078 WELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLG 1137
W +Y+++F +LS +Q+V +GVSE ++ + A G +R K D
Sbjct: 844 WMVYFKQFGQLSPTEQNVAALLGVSESFIGKKAAGQAVR---KKVDKN------------ 888
Query: 1138 ITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFAS 1197
V R Y++ +L L++ET V V E F + RG +Q L A F+S
Sbjct: 889 --------------VVNRLYLSFVLYSLLKETNVWSVSEKFNLPRGYIQNLLMGAASFSS 934
Query: 1198 MVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPL 1256
V FCE L ++ + L+ + ++++ V+AE++ L + V RA+ LY AG R+ +
Sbjct: 935 CVLHFCEELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYRSIM 994
Query: 1257 AIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +VK I RR A++I + A+ ++ EKAE
Sbjct: 995 HLANANPEVLVKT-------IDHLSRR----QARQIVSSAKMLLHEKAE 1032
>gi|358391463|gb|EHK40867.1| hypothetical protein TRIATDRAFT_204552 [Trichoderma atroviride IMI
206040]
Length = 964
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 275/839 (32%), Positives = 439/839 (52%), Gaps = 111/839 (13%)
Query: 490 AGTPSSSGMLKDCLDLSSW---LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLV 545
A TPSSS + D LDL+ LP ++ + + GI ++YPWQ CL G+L +NLV
Sbjct: 103 AATPSSS--IDDELDLAHPVYNLPPQLVNNFASLGIKQIYPWQKNCLKGPGLLTGAKNLV 160
Query: 546 YCASTSAGKSFVAEILMLRRLISTGKM-ALLVLPYVSICAEKAEHLEVLLEPLG------ 598
YCA T GKS VA++LML+R++ + ALL+LPYV++ EK L +++ L
Sbjct: 161 YCAPTGGGKSLVADLLMLKRVMEEPETKALLILPYVALVQEKVRWLRSVVQGLSATLDPE 220
Query: 599 ----RHVRSYY------------GNQGGGSLP---KDTSVAVCTIEKANSLVNRMLEEGR 639
R S + G GGG + +D +A+CT+EKAN L+N +E+
Sbjct: 221 ALEKRKATSIWQTRPDHDSIKVVGFFGGGKIRSSWQDFDIAICTLEKANMLINTAIEDSS 280
Query: 640 LSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHG 699
+S++ +V+DELHM+ D +RGYLLEL+ TKL
Sbjct: 281 ISQLRAVVLDELHMIDDDHRGYLLELIATKL-----------------------LSLEQP 317
Query: 700 LQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY--------------- 744
+QI+GMSAT+PN VA+WL+A YET +RP+P+EE++ +Y
Sbjct: 318 IQIIGMSATLPNANLVAEWLKAHSYETRYRPIPIEEHLVCDGKVYYVGSNGASAQRHLKV 377
Query: 745 ----SKKMDVVRTILTAANLGGKDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+ +++ R I +++ +DP + +V L E G+ LIF SR CE+ AR
Sbjct: 378 DEISNGQVEPTRWIQGSSHREFQDPVMNAVVSLAHETAVLGYGSLIFAGSRSICEADARL 437
Query: 799 VSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEER 858
+SK + + ++ + +D+ S LR G DPVLEET+ GVA+HHAGLT EER
Sbjct: 438 ISKVMPQLDELDSATMDKRMDLLSE---LRSLSTGADPVLEETVLYGVAFHHAGLTSEER 494
Query: 859 EVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTG 918
+++ Y G + V AT +LAAG+NLPARRVI R+GRDF+ + RQM GRAGR G
Sbjct: 495 DLIAAAYDDGTLPVCVATCSLAAGINLPARRVILHNARMGRDFVGPSMLRQMRGRAGRQG 554
Query: 919 IDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDI 978
GE+ L C+ ++++++ L+ P + SCL+ + + AILEV++ + + E +
Sbjct: 555 KSPVGETYLCCRQNDLEQVLDLMYADIPEIVSCLNTENKRVQRAILEVISVRLATSQESL 614
Query: 979 HRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCP 1038
Y +L++ T + + + + L+ + H L N+ ++ T LG+A SS+ P
Sbjct: 615 TEYFSNSLISYTHDREFIEECLKSGLQEI-HDLGLIVNDSYSNFTATQLGKAIVASSVDP 673
Query: 1039 EESLIVLDDLSRAREGFVLASDLHLVYLSTPI-NVEVEPDWELYYERFLELSALDQS--- 1094
+ + + +L++ + FV+ ++H++Y+ TP+ + + +W+++ E+ ALD+S
Sbjct: 674 YDGVFIHAELTKTLKAFVMDGEMHILYVFTPVQDFGITLNWQIFRN---EMDALDESGLR 730
Query: 1095 VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCK 1154
V +G+ + + A GAP+R N + + RV +
Sbjct: 731 VLGFLGIKPTAVQKFAQGAPLR------------------------ENTPEEKELARVYR 766
Query: 1155 RFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGL 1214
RFY+AL L L E P+ V + RG VQ L + FA+ + FCE +GW +
Sbjct: 767 RFYLALQLRDLCNEMPIHMVARKYDSPRGSVQTLAQTCQGFAAGIIKFCEHMGWGIMAAA 826
Query: 1215 IAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFES 1273
+ F +R+ G R +++ L IP++K AR ++ G RT AIA A E+V L ++
Sbjct: 827 LEHFSDRLMAGARTDLLALAKIPFIKSRTARVFWENGYRTIGAIANADPKELVLVLMQA 885
>gi|308808137|ref|XP_003081379.1| helicase and polymerase containing protein TEBICHI (ISS)
[Ostreococcus tauri]
gi|116059841|emb|CAL55548.1| helicase and polymerase containing protein TEBICHI (ISS)
[Ostreococcus tauri]
Length = 1489
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 300/898 (33%), Positives = 459/898 (51%), Gaps = 130/898 (14%)
Query: 503 LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEI 560
+DL W +P ++G+ +LYPWQ ECL + GVL NL+Y A TS GKS VA++
Sbjct: 13 VDLEFWGVPETAREALARKGVRELYPWQAECLALPGVLDGSSNLLYSAPTSGGKSLVADV 72
Query: 561 LMLRRLIST-GKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
L++RR G +A++VLP+V++C E+A+ LE LL VR YG +GG ++P D+S
Sbjct: 73 LLIRRFREKPGSIAMMVLPFVALCEERADSLENLLAGSEVRVRRMYGGRGG-TIPSDSSA 131
Query: 620 A---VCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAG- 675
+ V T E+AN + +R+LE+ RL E+ ++++DELH++ D +RG +EL LTKL +++G
Sbjct: 132 STLLVLTPERANQVTSRLLEDNRLRELSVVIVDELHLIQDNDRGATMELFLTKLVFSSGL 191
Query: 676 -----------EGTSD--SSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAA 722
G++D S + + G + G QI+GMSA++PN+ ++A+WL A
Sbjct: 192 WRRKLSEENDARGSADGESQTTYSVGRTRGGVRDQRTTQILGMSASIPNLTSLAEWLSAR 251
Query: 723 LYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSV 782
L+ T+FRPV LE V+RT+ + D HI EL E V E SV
Sbjct: 252 LFVTDFRPVRLER--------------VIRTMTNKSP--NSDVAHIAELAQETVDEQGSV 295
Query: 783 LIFCSSRKGCESTARHVSKFLK-KFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEET 841
L+FCSSR+ C+ A + ++ S N + S +TS + L G +
Sbjct: 296 LVFCSSRRACKILADDLQSMMRCDPSCNGANVTSSGELLTSFVAFL-----GEKSEVLGY 350
Query: 842 LPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDF 901
+ SG+AYHHAGL+ EE E V Y++GL+RVL TSTLA GVNLPARRVI R +G
Sbjct: 351 IKSGIAYHHAGLSREENEAVAGAYKRGLIRVLCCTSTLATGVNLPARRVILRDTNMGWKK 410
Query: 902 IDGTRYRQMAGRAGRTGIDTKGESMLIC-KPEEVKKIMGLLNESCPPLHSCLSEDKNGMT 960
+ +QM GRAGR G+D G +++ C K +++K L S ++E GM
Sbjct: 411 LTARDVQQMCGRAGRAGLDASGSAIVFCQKRADLEK----------RLTSAVAE--IGMR 458
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKS-AQDSLRWLCHRKFLEWNEDT 1019
+LE VA G+V+T ED+ YV+CTLL++ F D VK A D+L+W L W+ T
Sbjct: 459 RIMLEAVASGLVKTPEDVLAYVKCTLLSALNDFNDAVKQIAIDALQWCQRNALLVWSTTT 518
Query: 1020 KLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLST----------P 1069
L++++PLG A G + ++ ++ D+ ARE VL++ LHL++L T P
Sbjct: 519 YLWNSSPLGTAVAGGMMPLDQIQPIVRDIRIAREDLVLSTPLHLLFLLTSPPVLDSDGAP 578
Query: 1070 INVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLH 1129
+NV + + + LS+ + + +V + E Y+ R+
Sbjct: 579 LNVRETWPLDRFAAVWSNLSSEQERIARKVEIDEGYIQRL-------------------- 618
Query: 1130 GKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQ 1189
+RF++AL L+ L+QE P+ V + + + + Q
Sbjct: 619 ------------------------RRFHLALALTDLIQEVPIDVVAQKYGLRTFDIAEEQ 654
Query: 1190 ENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYK 1249
+ RFAS V+ C LG D+E LI K +R++ G + EI+ELT IP++ RARALY
Sbjct: 655 KACARFASYVATICGTLGMGDMEFLINKISDRITAGAQEEILELTKIPHIGIHRARALYA 714
Query: 1250 AGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEEARI 1309
G+ P +I + + A+ + S + I A++ AE I
Sbjct: 715 GGITNPKSIVTLGSVDKIAAVLKQYS-------KNDASTPAAIVRAAQQAEARLAEIGEI 767
Query: 1310 AAFSAF----KSLGLNVPQFSRPILSTATENST--------GEEEAATTAPRNDKSSS 1355
A AF + L+V + + +L EN T EE + PR+D +S
Sbjct: 768 EADMAFDEPINATELDVHRATGAVLLDTPENVTSFLRAWEISEEYSVMFQPRSDIDAS 825
Score = 214 bits (544), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 161/496 (32%), Positives = 239/496 (48%), Gaps = 57/496 (11%)
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
R VA + LW+ +++LI AL+ +E+P V + ME + D + +
Sbjct: 989 RAVASCFLMGRFLWEECEAKDLIRALIRVEMPFVAPIVAMETVKVPFDPRRLKEEIAAMD 1048
Query: 1770 KKLRYLEKKAYTL--------AGMKFSLYTAADIANVLYGHLKLPIPEGHNKG--KQHPS 1819
+L+ LE+ A A ++ + A + LY HLKL P G K S
Sbjct: 1049 DRLKKLEEYAKKQKWLDPLHPANLRRAFTDNAYLVKCLYEHLKLTPPAGSELAFTKDWVS 1108
Query: 1820 TDKHCLDLLR------HE---HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQ-KYT 1869
K C + HE H +I EHR++ K L + + SM ++ +Y+
Sbjct: 1109 NAKECTVSTKTTYEKVHEQSGHMFPLLILEHRSVFKRLTFA-DVLLGMYGESMDSRIRYS 1167
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQ 1929
+H QT+ GRL+ EPN + H M D + G +D I+ R F P
Sbjct: 1168 IH----QTNHDCGRLTHIEPNFHSMAH----DMKCVDAFDG---LDAPVISVRSAFTPPA 1216
Query: 1930 ENWILLAADYSQIELRLMAHFSKDPALIGLLSKP-----HGDVFTMIAARWTGRSEDSVG 1984
+ + L DYS +ELR+MAHFS D LI LL P H D FTM+A +W G ++V
Sbjct: 1217 DR-VFLRVDYSHLELRVMAHFSGDQTLIALLQNPEPVNAHDDPFTMLACKWRGVPLNAVS 1275
Query: 1985 SQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCH 2044
ER + K L+YGILYG G L+ +L S +AK + KS P + +W V+
Sbjct: 1276 VDERQRVKNLVYGILYGSGVKRLARELRLSDEKAKILVDELKSMLPTLMNWRDDVVARAI 1335
Query: 2045 QKG---YVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSII 2101
++ V ++ R R+ ++ + E+S A+RQAVN++CQGSAADI K A++ + +
Sbjct: 1336 EEKPIPRVTTISSRHRYFPELLSRSGDERSAAERQAVNTVCQGSAADIFKTAVVLVMETL 1395
Query: 2102 VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLL- 2160
+ L RC+L+L VHDE V EV+ SV K A +V+ MES A +
Sbjct: 1396 -------------RAKHLLDRCQLVLTVHDEAVFEVNASVAKAAARIVRNTMESVAGVFN 1442
Query: 2161 --VPLLVKIQVGSTWG 2174
VPL VK Q+G + G
Sbjct: 1443 LSVPLPVKAQIGPSLG 1458
>gi|189533893|ref|XP_691411.3| PREDICTED: helicase, POLQ-like [Danio rerio]
Length = 1010
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 284/827 (34%), Positives = 437/827 (52%), Gaps = 105/827 (12%)
Query: 509 LPSEICS-IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ I++ +GI LY WQ CL +D + QRRNL+Y TS GK+ VAEIL+ + L+
Sbjct: 240 LPSKVKDLIFRLKGIQDLYEWQKTCLSLDSIQQRRNLIYSLPTSGGKTLVAEILIFKELL 299
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K ALL+LPY+S+ EK L L V Y G++G K S+ + TI
Sbjct: 300 CRKKDALLILPYISLVQEKVRGLSSFGIELDFLVEEYAGSKGKFPPVKRRNKNSLYITTI 359
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EK +SLVN ++E RL IG++V+DELHM+ D +RG +LE+ L+K+ Y +
Sbjct: 360 EKGHSLVNSLIENDRLDNIGLVVVDELHMLGDGSRGAILEMTLSKILYMS---------- 409
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
Q++GMSAT+ NV + +L+A Y NFRPV L+EY+K+ ++IY
Sbjct: 410 -------------KSTQVIGMSATLGNVKDLQSFLRAENYTNNFRPVELKEYVKIKDSIY 456
Query: 745 --SKKMDVVRTILTAAN------LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
K + T N + DPDHI+ L EV+ + S LIFC+++K CE+ A
Sbjct: 457 EVDPKEEACFTFSRLLNFKYSSGMQKMDPDHIIALATEVIPQ-QSCLIFCATKKNCENLA 515
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ K+L K I ++ + + L+ G L PVL++T+P G+AYHH+GLT
Sbjct: 516 GMICKYLNKEFIKHKEAEKAIL-----LGELKSSGNGSLCPVLQKTIPFGLAYHHSGLTS 570
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER++VE Y G++ +LT TSTLAAG+NLPARRVI R P + DF+ ++Y+QM GRAG
Sbjct: 571 DERKLVEEAYSSGVLCLLTCTSTLAAGINLPARRVILRSPYVAADFLKRSQYKQMVGRAG 630
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSC----LSEDKNGMTHAILEVVAGGI 971
R GID GES+LI + +++ LL C P+ C L + G+ IL ++ I
Sbjct: 631 RAGIDAMGESILILQDKDINTAKKLL---CAPMEKCYSNLLHDGGRGLLSLILSLIGLKI 687
Query: 972 VQTAEDIHRYVRCTLLN----STKPFQDVVKSAQDSLRWLCHRKFLEWNED---TKLYST 1024
T E + ++ T L P + + +S++ L + +E + D +
Sbjct: 688 TTTVEQVKDLMKGTFLGVQEAQVSPEKSLWDLTVESIQTLKQKNLIEVSSDENNQNILQI 747
Query: 1025 TPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYY 1082
T LGRA + S+ ++ DLS+ EG +L S LHLVYL TP ++ + +PDW +Y+
Sbjct: 748 TRLGRATYKGSVDLSYCDVLYRDLSKGLEGLLLNSFLHLVYLVTPYDMVHQCKPDWMIYF 807
Query: 1083 ERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNN 1142
+F LSA +Q + VGV E ++ R A G +R S +
Sbjct: 808 RQFTNLSAAEQKMATTVGVPESFVARKAAGQSVRKSVDVVVVN----------------- 850
Query: 1143 MLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVF 1202
R Y+AL+L L++ET + V E F++ RG VQ L +A F S V F
Sbjct: 851 ------------RLYLALVLFSLLKETNLWIVSERFQLTRGFVQTLLSSASAFGSSVLHF 898
Query: 1203 CERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEA 1261
E L ++ + L+++ R+++ V+AE++ L + V RA+ LY AG +T +A A
Sbjct: 899 TEELEEFWAYKALLSELTRRLTYCVQAELIPLMEVSGVLEHRAKQLYSAGYKTLSHLANA 958
Query: 1262 ---SISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
++ + ++ LF+ ++ +I A+ ++ EKAE
Sbjct: 959 DPQTLVQTIENLFKKQAY--------------QIIASAKMLLTEKAE 991
>gi|281604129|ref|NP_001014156.2| helicase, POLQ-like [Rattus norvegicus]
gi|149046780|gb|EDL99554.1| rCG37823, isoform CRA_c [Rattus norvegicus]
Length = 1065
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 279/791 (35%), Positives = 431/791 (54%), Gaps = 89/791 (11%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI +LY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 274 LPSKVRDLYAQLKGIKRLYDWQHTCLTLSSVQERKNLIYSLPTSGGKTLVAEILMLQELL 333
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K LL+LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 334 CRQKDVLLILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKG--RFPPIKRREKKSLYIA 391
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 392 TIEKGHSLVNALIETGRMGTLGLVVVDELHMIGEGSRGATLEMTLAKVLY-----TSKTT 446
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +L+A Y + FRPV L+E++KV +
Sbjct: 447 ------------------QIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDT 488
Query: 743 IYSKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY V + + L K DPD +V L EV+ +S L+FC S+K CE+
Sbjct: 489 IYEVDSRAVDGMTFSRLLNYKYSDALKKVDPDRLVALVTEVI-PNYSCLVFCPSKKNCEN 547
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL + +N H + + I +LR G + PVL+ T+P GVAYHH+GL
Sbjct: 548 VAEMLCKFLSRDYLN-HREEEK----GELIKSLRNVGHGKVCPVLKRTIPFGVAYHHSGL 602
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + F+ +Y+QM GR
Sbjct: 603 TSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQYKQMIGR 662
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSED-KNGMTHAILEVVAGGIV 972
AGR GIDT GES+L+ + ++ ++++GL+N HS L E+ G+ L ++ I
Sbjct: 663 AGRAGIDTAGESILLLQEKDKQQVLGLINGPLEDCHSHLVEEFTKGIQSLFLSLIGLKIA 722
Query: 973 QTAEDIHRYVRCTLLNSTKPFQDVVKSAQD----SLRWLCHRKFLEWN-----EDTKL-Y 1022
++ DI++++ TL + KS + +L L + L+ + E+++ +
Sbjct: 723 ESLGDIYQFMNGTLFGVQQKTLLREKSLWEVTVGALEHLTEKGLLQKDSHGSPEESRCHF 782
Query: 1023 STTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWEL 1080
T LG+A+F ++ + DL + EG VL S LHLVYL+TP ++ + EPDW +
Sbjct: 783 RITKLGQASFKGAIDLTYCDTLYRDLKKGLEGLVLESLLHLVYLTTPYDLAAQSEPDWMV 842
Query: 1081 YYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITS 1140
Y+ +F +LS +QSV +G+SE ++ R A G +R K D
Sbjct: 843 YFRQFSQLSPAEQSVATLLGISESFIGRKASGQAIR---KKVDKN--------------- 884
Query: 1141 NNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVS 1200
R Y++ +L L++ET V V E F + RG +Q L A F+S V
Sbjct: 885 -----------AVNRLYLSFVLYSLLKETNVWSVSERFNMPRGYIQNLLMGAASFSSCVL 933
Query: 1201 VFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIA 1259
FCE L ++ + L+ + ++++ V+AE++ L + V RA+ LY AG R+ + +A
Sbjct: 934 HFCEELEEFWVYKALLTELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYRSVVHLA 993
Query: 1260 EASISEIVKAL 1270
A+ +VK +
Sbjct: 994 NANPEVLVKTI 1004
>gi|303271985|ref|XP_003055354.1| helicase/polymerase domain-containing protein [Micromonas pusilla
CCMP1545]
gi|226463328|gb|EEH60606.1| helicase/polymerase domain-containing protein [Micromonas pusilla
CCMP1545]
Length = 1996
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 310/947 (32%), Positives = 467/947 (49%), Gaps = 151/947 (15%)
Query: 506 SSWLPSEICSIYK-KRGISKLYPWQVECLHVDGVLQR-RNLVYCASTSAGKSFVAEILML 563
S LP + Y+ ++ I++L+ WQ ECL GV +NLVYCA TS GKS VA+IL++
Sbjct: 307 SQGLPEPVVEYYRDEKNITRLHAWQAECLSTPGVSDGGKNLVYCAPTSGGKSIVADILLM 366
Query: 564 RRLISTG-----------------KMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYG 606
+RL++ G +A++VLP++S+C E+A L LL+ + V+ +YG
Sbjct: 367 KRLVADGFGGKRREKNAVAADRGGNLAIIVLPFISLCDERANELAKLLKLIHVDVKRFYG 426
Query: 607 NQGGGSLPKDTS---VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLL 663
+GG P+D+ + VCT EKAN +V++++E+ R+ ++ +V+DELHMV D++RG L
Sbjct: 427 GRGGALPPRDSKERVLLVCTPEKANDVVSKLIEDDRVRDLAAVVVDELHMVQDESRGSTL 486
Query: 664 ELLLTKLRYAAGEGTSDSSSGENSGTSSGKA---------DPAHGL-------------- 700
EL+LTKL +A+ + + + + EN SS +P
Sbjct: 487 ELMLTKLLFASSKAAAAAIAAENVSPSSDGGDGGKGAGSREPLSASSRGSKSAAAAAAAA 546
Query: 701 ----QIVGMSATMPNVAAVADWLQ-AALYETNFRPVPLEEYIKVGNAIYS--KKMDVVRT 753
QI+GMSAT+PNV +A WL AALY T++RPV L IK+G+ +Y + + V
Sbjct: 547 KRTPQIIGMSATLPNVDGLAKWLDDAALYVTDYRPVALRLSIKLGSDVYPLPSREEEVED 606
Query: 754 ILTAANLG---------GKDPDHIVELCDEVVQEGH---SVLIFCSSRKGCESTARHVSK 801
L G D H+ +L E + G V++FCS++ CE AR +SK
Sbjct: 607 GEDDDVLSERRKVSLKDGDDASHVAQLAQETMDRGAVGGGVIVFCSAKFQCEVMARMLSK 666
Query: 802 FLKKFSINVHSSDSEFIDITSAIDALRRC-PAGLD----PVLEETLPSGVAYHHAGLTVE 856
K ++ + S+ +D SA +LR P D P L T+ +GVA+HHA L E
Sbjct: 667 ---KLRVDADARASDGLDRISA--SLRNVNPNATDTANRPALATTVANGVAWHHAALHAE 721
Query: 857 EREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRD------FIDGTRYRQM 910
E+ +VE +R G +RV+ TST+AAGVNLPA RVI P I R + +Q
Sbjct: 722 EKRLVEDGFRSGAIRVICCTSTMAAGVNLPASRVIIAHPYIYRQKPARHALLSSRDLKQA 781
Query: 911 AGRAGRTGIDTKGESMLIC-KPEEV--------------------------KKIMGLLNE 943
AGRAGR G+ +GE+ ++ +P E+ +++ L
Sbjct: 782 AGRAGRAGLADRGEAFVVVPEPSEIDCDFAAGGGGGGGGGKSKAKSKAALARELARRLLS 841
Query: 944 SCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVV-KSAQD 1002
L S ++ ++ M +LE +AGG+V++A D+ Y++CTLLN+ FQ+V + A+D
Sbjct: 842 EGDALSSTIAGER--MRRVMLEALAGGLVKSARDVQCYIQCTLLNALNDFQEVTARGAKD 899
Query: 1003 SLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLH 1062
+L WL R F+ WNE T Y+ +PLGRAA P+E+ V+D + RAR G L SDLH
Sbjct: 900 ALAWLAQRGFMSWNEKTAEYTPSPLGRAAAAGRFEPDEAAAVVDVVKRARRGLNLESDLH 959
Query: 1063 LVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLR 1122
L++L P + P + + + + + + R AP + + R
Sbjct: 960 LLFLCVPPD----PPAPMDVDADGGGGGARAAKDDPLSPASIVAARNKPVAPPKTDTTCR 1015
Query: 1123 ----------DSTKGLHGKLEYRLGITS-----------NNMLSDAQTLRVCKRFYVALI 1161
D+ + R G+ + D + RVC RF AL
Sbjct: 1016 LNPTAFVSVYDNLTEHEHDVATRCGVLDSYARQLKMSKRDKTPEDRASRRVCHRFMKALQ 1075
Query: 1162 LSRLVQETPVLEVCETFK----------VARGMVQALQENAGRFASMVSVFCERLGWYDL 1211
L LV E V ++ F A + Q LQE A R+A V+ C +GW D+
Sbjct: 1076 LRDLVAERDVADIARAFSENGKDANVNGFASYLAQ-LQEQAVRYAGQVAALCGPMGWGDV 1134
Query: 1212 EGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
E L+A+ Q+R++ G R EIV LT IP + RARALY AG R+P AI ++ L
Sbjct: 1135 EVLLARLQDRIAAGAREEIVSLTQIPMISAGRARALYNAGYRSPEAILRLDQKKLAGVLK 1194
Query: 1272 ESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEEARIAAFSAFKSL 1318
+ R ++ A I GAR + E AR + + K L
Sbjct: 1195 Q-----CRGARGGEMKAAAIILRGARALCAEARRLAREESEAKLKEL 1236
Score = 217 bits (552), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 196/672 (29%), Positives = 301/672 (44%), Gaps = 118/672 (17%)
Query: 1586 WKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLS 1645
W R+ +++ + V K T ++K Q++ + G+ + +
Sbjct: 1357 WTRVRDVLSRSGVGKVTVDLKPQLRAM-------------------------GAGATIAA 1391
Query: 1646 PVHLKDGIDMCIVSWILWPDDE-------------RSSNPNLEKE----VKKRLSSEAAA 1688
PV +D+ I +W+L PD+E + +P+ + + +R + + A
Sbjct: 1392 PV-----VDVKIAAWVLHPDEELLKYSSQTGWDALNAVDPDRARGPCAGMLERFAGDVDA 1446
Query: 1689 AANRSG-RWKNQMRRAAHNGCCRRVAQTRALCSVLWKL--LVSEELIE---------ALL 1736
A R+ +W+ RA +G A + L LV +L + AL
Sbjct: 1447 DAIRAASKWRGP--RATADGVNAGGANAAFAVASALSLDALVRAKLADPRAPSGLEDALR 1504
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT------------LAG 1784
IE+PLV VLA ME G+ + K++R +E +A +A
Sbjct: 1505 AIEMPLVPVLASMERAGVAFAPATLSRQLRRATKRVREIETEAVAVVATHFACRHPGMAP 1564
Query: 1785 MKFSLYTAADIANVLY----GHLKLPIPEGHN----KGKQHPSTDKHCLDLLRHEH-PIV 1835
+F+L ++ D+A VL+ L P G +G++ D L L+R + PI
Sbjct: 1565 PEFNLASSDDVARVLFDAPPAGLGAEPPRGAKPTAARGRRSTRQD-DLLALVREQGGPIA 1623
Query: 1836 PVIK---EHRTLAKLLNCTLGSICSLARISMSTQKYT---------LHGHWLQTSTATGR 1883
K EHR+L KLL+ LA+ + L G QT+T TGR
Sbjct: 1624 AFPKLVLEHRSLRKLLD-EANEFGRLAKSELGGDAAAAADESVTIRLRGVIHQTNTGTGR 1682
Query: 1884 LSMEEPNLQCVEHMVEFKMSN---EDIY-------GGNAEVDHCKINARDFFIPSQENWI 1933
L+ME+PNLQCV EF +S E + G +A + F P +
Sbjct: 1683 LAMEDPNLQCVPRPREFALSRAYPERLSASGRVSPGTDAGAEETLAIRNAFRAPRGKK-- 1740
Query: 1934 LLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT--GRSEDSVGSQERDQT 1991
L+A DY QIELR++AH S D LI L D F +IAARW G + +V ++R +
Sbjct: 1741 LIAFDYKQIELRVIAHLSCDRGLIAALCVRSVDPFKVIAARWKGDGTTPKNVSDEDRAKA 1800
Query: 1992 KRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKG--YV 2049
K L YGI YG G + + + EA+ I+ FK S PGV W V ++ +V
Sbjct: 1801 KELCYGICYGAGVGRYQQAMGVTELEARAAIEDFKRSLPGVERWKSALVKDARERTPPHV 1860
Query: 2050 ESLKGRKRFLSKIKF-GNNKE-KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYK 2107
++ GR RFL + G E ++ +R+A+N+ CQGSAADI+K MI +H+ + G
Sbjct: 1861 RTIAGRCRFLPSLNATGAGGEIRAADERKAINTACQGSAADIVKRVMIELHAKLTSGGGA 1920
Query: 2108 PDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAAL---LLVPLL 2164
D A + + C ++LQVHDEL+ EVD + AV ++ ME A + VPL
Sbjct: 1921 DDDDEWAPLREVDA-CEMVLQVHDELLFEVDERKVDVAVRAIRGVMERAREVHDMKVPLP 1979
Query: 2165 VKIQVGSTWGSL 2176
V++ VG WG L
Sbjct: 1980 VRVSVGDDWGRL 1991
>gi|148688331|gb|EDL20278.1| mCG128467, isoform CRA_b [Mus musculus]
Length = 1066
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 289/829 (34%), Positives = 445/829 (53%), Gaps = 109/829 (13%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 278 LPSKVRDLYVQLKGIKKLYDWQHTCLTLRSVQERKNLIYSLPTSGGKTLVAEILMLQELL 337
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 338 CRQKDVLMILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKG--RFPPIKRREKKSLYIA 395
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKA+SLVN ++E RLS +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 396 TIEKAHSLVNALIETSRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLY-----TSKTT 450
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +L+A Y + FRPV L+E++KV +
Sbjct: 451 ------------------QIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDT 492
Query: 743 IY------SKKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY + M R + + L DPD +V L EV+ +S L+FC S+K CE+
Sbjct: 493 IYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALVTEVIP-NYSCLVFCPSKKNCEN 551
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL K +N + I +LR G + PVL+ T+P G+AYHH+GL
Sbjct: 552 VAEMLCKFLSKDYLNHREKEK-----CEVIKSLRNIGNGKVCPVLKRTVPFGIAYHHSGL 606
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T EER+++E Y G++ +LT TSTLAAGVNLPARRVI R P + F+ +Y+QM GR
Sbjct: 607 TSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQYKQMVGR 666
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GIDT GES+L+ + ++ ++++ L++ PL +C S E G+ L ++
Sbjct: 667 AGRAGIDTAGESILLLQEKDKQQVLELIS---GPLETCCSHLVEEFTKGIQALFLSLIGL 723
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEW-----NEDTK 1020
I + DI++++ T + KS D+L L + L+ NE +
Sbjct: 724 KIAASLGDIYQFMSGTFFGVQQKILLKEKSLWEITVDALEHLTEKGLLQKDSCGDNEGLE 783
Query: 1021 L-YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPD 1077
+ T LG+A+F ++ + DL + EG VL S LHL+YL+TP ++ + EPD
Sbjct: 784 CHFRITKLGQASFKGAIDLAYCDTLYRDLKKGLEGLVLESLLHLIYLTTPYDLAAQSEPD 843
Query: 1078 WELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLG 1137
W +Y+++F +LS +Q+V +GVSE ++ + A G +
Sbjct: 844 WMVYFKQFGQLSPTEQNVAALLGVSESFIGKKAAG----------------------QAK 881
Query: 1138 ITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFAS 1197
+ N V R Y++ +L L++ET V V E F + RG +Q L A F+S
Sbjct: 882 VDKN----------VVNRLYLSFVLYSLLKETNVWSVSEKFNLPRGYIQNLLMGAASFSS 931
Query: 1198 MVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPL 1256
V FCE L ++ + L+ + ++++ V+AE++ L + V RA+ LY AG R+ +
Sbjct: 932 CVLHFCEELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYRSIM 991
Query: 1257 AIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A+ +VK I RR A++I + A+ ++ EKAE
Sbjct: 992 HLANANPEVLVKT-------IDHLSRR----QARQIVSSAKMLLHEKAE 1029
>gi|412990681|emb|CCO18053.1| predicted protein [Bathycoccus prasinos]
Length = 1828
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 299/835 (35%), Positives = 439/835 (52%), Gaps = 110/835 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQR-RNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++GI KLY WQ + L+ GVL +N+VYCA TS GKS VA+IL+ RRL
Sbjct: 148 LPESFVKYLHRKGIKKLYDWQSDVLNTPGVLTHGQNIVYCAPTSGGKSLVADILLARRLT 207
Query: 568 S-TGKMALLVLPYVSICAEKAEHLEVLLEPLGR-HVRSYYGNQGGGSLPK----DTSVAV 621
G + LLVLP+VS+C E+A LE+LL + R V ++G GGG +PK T + V
Sbjct: 208 QYKGCICLLVLPFVSLCVERARDLEILLSSIHRLRVLRHFGGSGGG-IPKSGTGQTYLIV 266
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGE-GTSD 680
CT EKAN+LV +M+E+ RL ++ +V+DELHMV + RG LE LLTKL YA E G+
Sbjct: 267 CTPEKANALVTKMIEQHRLKDLKCVVVDELHMVQEPGRGATLECLLTKLVYATEENGSGA 326
Query: 681 SSSGENSGTSSG------KADPAHGL------------------QIVGMSATMPNVAAVA 716
N+ T G +D + + QIVGMSAT+PNV A+A
Sbjct: 327 PGDAANTNTVLGDVSQYSSSDGGYSIFSPPSKEGENTMNNQRPIQIVGMSATLPNVNALA 386
Query: 717 DWLQAALYETNFRPVPLEEYIKV-GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEV 775
+WL A+ +N+RPV LE ++K N I S +VVRT+ G D H+ +LC E
Sbjct: 387 EWLDASCSISNYRPVTLEVFVKSRNNIIDSASGEVVRTLEQ-----GNDVVHVGKLCMET 441
Query: 776 VQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDAL-RRCPAGL 834
+QE VL+FC +R C A ++K +K +N+ +S A DAL R G
Sbjct: 442 LQENGQVLVFCGTRDKCRVLADQLAK-MKFVDVNLGIGNSVEAREQFAYDALPRNDKDGS 500
Query: 835 DPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQ 894
+ + + SG+A+HHAG+ VEER+ +E Y++GLVR++ ATSTLAAGVN+PARRVI R
Sbjct: 501 ISNIAKYIISGIAFHHAGMQVEERQAIEVAYKRGLVRIVCATSTLAAGVNMPARRVIVRD 560
Query: 895 PRI-GRDFIDGTRYRQMAGRAGRTGIDTKGESMLICK---PEEV-----KKIMGLLNESC 945
+ G ++ +QM GRAGR G+D +G + + PE+V +++ +L
Sbjct: 561 LLVGGTQKLEPRNLQQMIGRAGRAGLDDRGSAYVFVGQDVPEKVLEKKIEEVRDMLEGDL 620
Query: 946 PPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKS-AQDSL 1004
P L S L++ GM +LE A G+V+ A ++ RY + TLL++ F D V+S A ++L
Sbjct: 621 PELESALAQ--AGMRRVMLEGCASGLVRHAREVKRYAQKTLLSALNDFDDYVQSIAVEAL 678
Query: 1005 RWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESL-IVLDDLSRAREGFVLASDLHL 1063
+WL L+W T YS + LG AA S + ES+ V DL AR+ VLA+ LHL
Sbjct: 679 KWLQDEALLKWCPKTHTYSASNLGNAAAQSGMVKVESIRRVEQDLLLARKALVLATPLHL 738
Query: 1064 VYLSTPINVEVEPDW---------------------------ELYYERFLELSALDQSVG 1096
++L TP DW + + + + L L +SV
Sbjct: 739 LFLITPT-----LDWREEEIVQKNGKVIKKMVPPNPLPPLNQKFFMDLYSNLDPLQKSVL 793
Query: 1097 NQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRF 1156
VG+ Y + S+L+ GK++ + + A+ +C RF
Sbjct: 794 EMVGIDRAY-----------VESRLQ------QGKMD------NPRDENHARQRLLCIRF 830
Query: 1157 YVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIA 1216
ALIL LV+E V +C+ + + ++ LQE + R VS C + W DL L+
Sbjct: 831 INALILLDLVEEVKVDHICKKYSITGHTLKKLQEESVRLGFTVSSVCVYMRWQDLGDLVN 890
Query: 1217 KFQNRVSFGVRAEIVELTTI-PYVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
+ R+ G R +I+ LT + + +RARAL AG+++P + + + KA+
Sbjct: 891 RAAERLMVGGREDILPLTCVGDCIDVTRARALLDAGMKSPKDVVGFGVKRVQKAI 945
Score = 163 bits (413), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 225/500 (45%), Gaps = 87/500 (17%)
Query: 1730 ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKA-----YTLAG 1784
++ +AL +E+P LAD+E +GV + ++ + K R E + Y+
Sbjct: 1359 DVYQALRTLEMPFARALADIE--NVGVPINAAALQPHIAKAKARRDEIETICMQWYSPEM 1416
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPE---------------GHN---KGKQHPSTDKHCLD 1826
+L ++ D++ +L+ L L P+ G N K +Q D CL
Sbjct: 1417 PSVNLNSSTDVSILLFETLGLTPPDDAIIPDFNTKRYNDNGKNDKIKRRQKFKVDAECLK 1476
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCT--LGSICS---------------LARISMSTQKYT 1869
L HP+ +I EHR+L K + L + S ++R + +T K
Sbjct: 1477 QL--AHPVAALISEHRSLGKYVATAEELSLVASRPIQEEDEVDEDGVDISR-TKATTKDR 1533
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQ 1929
++ QT T TGR + PNL + H G + + R F Q
Sbjct: 1534 IYAFANQTDTETGRTTSVNPNLYSIPH-------------GAVSDEKVPTSLRSLFEAPQ 1580
Query: 1930 ENWILLAADYSQIELRLMAHFSKDPALIGLLS-----KPHGDVFTMIAARWTGRSEDSVG 1984
IL+A DY+Q+ELRL+AH S+D LI LS + + D FT IA++W ++V
Sbjct: 1581 -GRILVACDYAQLELRLVAHCSEDATLISALSSNPFEEENADPFTRIASKWMRVDYNAVT 1639
Query: 1985 SQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFK-SSFPGVASWLH--VAVS 2041
++R QTK L+YG++YG G ++ LN + NEA + + K ++ GV W +A+
Sbjct: 1640 DEQRKQTKNLVYGVIYGSGVKLFAKSLNIAENEATKMLDDLKGTTLLGVEKWKSQILALE 1699
Query: 2042 SCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSII 2101
+L GR R L ++K N + A+R +N++ QGSA DI+K+A +
Sbjct: 1700 KTKDSPRARTLSGRFRDLPELKSENFSHAATAERVFINTLMQGSAVDILKMATM------ 1753
Query: 2102 VGGVYKPDSSLAANFQM--LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAAL- 2158
S N + L + L+L +HDEL+ E D ++ K +K ME
Sbjct: 1754 ---------SALENLRKKSLLKKTDLILTIHDELLFECDENLAKMVGRETRKAMEDVGKH 1804
Query: 2159 --LLVPLLVKIQVGSTWGSL 2176
L VPL +++G TW L
Sbjct: 1805 FNLKVPLFADLRIGKTWADL 1824
>gi|348567326|ref|XP_003469451.1| PREDICTED: helicase POLQ-like [Cavia porcellus]
Length = 1138
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 287/830 (34%), Positives = 439/830 (52%), Gaps = 107/830 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI LY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 269 LPSKVRDLYVQFKGIKNLYEWQHTCLTLSCVQERKNLIYSLPTSGGKTLVAEILMLQELL 328
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K L++LPYV++ EK L LG V Y G++G P + S+ V
Sbjct: 329 CQRKDVLMILPYVALVQEKISGLSSFGIELGFFVEEYAGSKG--RFPPVKRREKKSLYVA 386
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKA+ LVN ++E GR+ +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 387 TIEKAHGLVNSLIETGRIGSLGLVVVDELHMIGEGSRGAILEMTLAKVLY-----TSKTT 441
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +LQA Y + FRPV L+EY+K+ +
Sbjct: 442 ------------------QIIGMSATLNNVQDLQTFLQAEYYSSQFRPVELKEYLKINDT 483
Query: 743 IYSKKMDVVRTILTAA--------NLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY +I + +L DPDH+V L EV+ +S LIFC S+K CE+
Sbjct: 484 IYEVDRKAESSITVSRLLPHQYSDSLKKMDPDHLVALVTEVI-PNYSCLIFCPSKKNCEN 542
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL K + + + LR G L PVL+ T+P G AYHH+GL
Sbjct: 543 VAEMLCKFLNKEYLKHREQEK-----CELLKNLRDSSGGHLCPVLKRTVPFGAAYHHSGL 597
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T EER+++E Y G++ +L TSTLAAGVNLPARRVI R P + ++F+ ++Y+QM GR
Sbjct: 598 TGEERKLLEGAYSAGVLCLLACTSTLAAGVNLPARRVILRAPYVAKEFLKKSQYKQMIGR 657
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GIDT GES+LI + ++ +K++ L++ PP +C S + G+ L ++
Sbjct: 658 AGRAGIDTVGESILILQEKDKQKVLELISR--PP-ENCYSHLVQQFTKGIQALFLSLIGL 714
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPF----QDVVKSAQDSLRWLCHRKFL------EWNEDT 1019
I DI+ ++ TL + + + + +SLR+L + L E E+
Sbjct: 715 KIATNLGDIYNFMNGTLFGVQQKILLKEKSLWEVTVESLRYLTEKGLLQKKHVSESGEEL 774
Query: 1020 KL-YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEP 1076
+ + T LG+A+F ++ + DL + EG VL + LHL+YL+TP ++ + +P
Sbjct: 775 QCNFHITKLGQASFKGTIDLAYCDTLYRDLKKGLEGLVLENLLHLIYLTTPYDLVSQCDP 834
Query: 1077 DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
+W +Y+ + +LS +Q V +GVSE Y+ + A G R K D
Sbjct: 835 NWMIYFRQIGQLSPAEQRVATLLGVSESYVAKKAAGQATR---KKVDKD----------- 880
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
V R Y++ IL L++ET V V E F + RG VQ L +A F+
Sbjct: 881 ---------------VVNRLYLSFILYALLKETNVWGVSEKFNIPRGSVQNLLMSAASFS 925
Query: 1197 SMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTP 1255
S V FCE L ++ L+ + ++++ V+AE++ L + V RA+ LY AG R+
Sbjct: 926 SCVLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYRSL 985
Query: 1256 LAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+A A +++ I RR AK+I + A+ ++ EKAE
Sbjct: 986 THLANADPEVLIRT-------IDHCSRR----QAKQIVSSAKMLLQEKAE 1024
>gi|342182643|emb|CCC92122.1| putative DNA polymerase theta (helicase domain only) [Trypanosoma
congolense IL3000]
Length = 1034
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 283/829 (34%), Positives = 423/829 (51%), Gaps = 112/829 (13%)
Query: 492 TPSS-SGMLKDCLDLSSWLPSEICSIYK-KRGISKLYPWQVECLHVDGVLQRRNLVYCAS 549
TPS+ SG D LP+ + Y +R I+ LY WQ E L D V +LVY
Sbjct: 214 TPSTDSGFFYD-------LPTSVRDFYSMRRNINSLYAWQHEVLMRDDVRGGESLVYSLP 266
Query: 550 TSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQG 609
TS GK+ VAEI +LR L++ K + VLP+VS+ EKAE L+ + + LG V +Y QG
Sbjct: 267 TSGGKTLVAEISLLRCLLNAEKSCMFVLPFVSLAEEKAESLKTMGDALGFTVDGHYSTQG 326
Query: 610 GGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTK 669
LP +V VCTIEKANSL+N ML+EG IG +V+DELHMV + RG LEL LTK
Sbjct: 327 RFPLPTTQTVFVCTIEKANSLINHMLDEGITERIGTVVVDELHMVGEPRRGPTLELFLTK 386
Query: 670 LRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFR 729
L +H +Q++GMSAT+PN+ +A WL+A+ Y ++R
Sbjct: 387 LLCL-----------------------SHKVQVIGMSATIPNLPNIAQWLRASCYLGDYR 423
Query: 730 PVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSR 789
PVPL Y VG + + V R ++ + + + + L E+ E SVL+FC++R
Sbjct: 424 PVPLCHYAVVGGVVLEDCVTVSRNLVESGLT--SEAEQLSYLATEL--EDASVLVFCATR 479
Query: 790 KGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYH 849
+ TA+ + + K+ ++ S +E + + + ++ L+ + +L E +P GVA+H
Sbjct: 480 QQTVDTAKFIVRHQKE-TVREGSIAAE-LAMRALLEDLKAMDSSDGQLLSELVPHGVAFH 537
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
H GL EER +VE +R+ + VL TSTLAAGVNLPARRVIFR P IG +F+ + Y Q
Sbjct: 538 HGGLLAEERALVERAFRQRRISVLCCTSTLAAGVNLPARRVIFRTPYIGMEFLSKSSYLQ 597
Query: 910 MAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAG 969
M GRAGR G+D GE+ L +++++ L+ S L E+K AILE V
Sbjct: 598 MCGRAGRAGLDDFGETFLFLPRKDIERGRDLMRRDVEACVSHLLEEKGVFERAILECVGI 657
Query: 970 GIVQTAEDIHRY-------------------------------VRCTLLN---------- 988
G+++T D R+ ++C L
Sbjct: 658 GLIRTLSDARRWLDSIMYHHAAGPMDSGFNTSSSSLEQTMEEILQCILRKLVDGGLMQRT 717
Query: 989 ----STKPFQDVVKSAQDSLRWLCHRKFLEWNED--TKLYSTTPLGRAAFGSSLCPEESL 1042
+T Q ++ ++ + + ED L + +P G A S E++L
Sbjct: 718 SQPAATDTQQGIISNSSTGAATVARHHTADSTEDDMAVLLTPSPFGACAVRSCFAVEDAL 777
Query: 1043 IVLDDLSRARE-GFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGV 1101
I+ +L + ++ G +LA DLHL Y TP+ VE +W +Y + LS Q + + VGV
Sbjct: 778 IIRAELEKLQQSGLILADDLHLCYFVTPLWEMVECNWAVYRDIMSRLSETRQRIASMVGV 837
Query: 1102 SEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALI 1161
E Y+ + A G LG + N S Q + +RFY+ALI
Sbjct: 838 DEFYINQRAMG-----------------------LGDPNGN--SSEQMFKT-RRFYLALI 871
Query: 1162 LSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNR 1221
L+ L+ E P+ V + ++ RG +Q L NA F+ ++ FC + W+ LE ++A F R
Sbjct: 872 LADLLNEVPMYVVEQRYQCKRGQLQNLMRNASMFSGSITSFCRAMEWFSLEAVLASFVKR 931
Query: 1222 VSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
+ FGV+ +IV L I V+ RARAL+ AG ++P AIA + E+++ L
Sbjct: 932 LGFGVKPDIVPLMEIRGVQPPRARALWVAGFKSPSAIASCTPMELLQRL 980
>gi|326476031|gb|EGE00041.1| DNA-directed DNA polymerase theta [Trichophyton tonsurans CBS 112818]
Length = 920
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 266/822 (32%), Positives = 421/822 (51%), Gaps = 122/822 (14%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+ + + G++ +YPWQ CL G L +NLVY A T GKS VA++LML+R++
Sbjct: 114 LPTALVKNFSSLGVNAIYPWQASCLLGRGHLSGEKNLVYSAPTGGGKSLVADVLMLKRIL 173
Query: 568 ST-GKMALLVLPYVSICAEKAEHLEVLLEPLGR--------------------------- 599
+ K A+LVLPYV++ EK + L ++E + R
Sbjct: 174 TCPDKKAILVLPYVALVQEKLKWLRRVVEGIPRCTHDDDTDNSADGARESSRLKSEENFI 233
Query: 600 HVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNR 659
V ++G + DT VAVCTIEKANSLVN +E+ + ++G+IV+DELHM+ D++R
Sbjct: 234 RVTGFFGGSKARTTWSDTDVAVCTIEKANSLVNSAIEDCTIDKLGVIVLDELHMLDDEHR 293
Query: 660 GYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWL 719
GYL+E+++TKL + +QI+GMSAT+ N +A WL
Sbjct: 294 GYLMEIMVTKLLLLQQD-----------------------IQIIGMSATLSNTEVLAKWL 330
Query: 720 QAALYETNFRPVPLEEYIKVGNAIYS--------KKMDVVRTILTAAN------------ 759
A Y + +RP+P+EE++ + IY +KM +R ++ N
Sbjct: 331 NANYYISRYRPIPVEEFLVFEDYIYPVPTTKGLLRKM--IRPDTSSPNDVPASACRVIRK 388
Query: 760 -----LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSD 814
L P+ +V L E G+ L+FC SR+ C++ A + + + D
Sbjct: 389 SEFRELAFPIPNAMVALACETAAAGYGALVFCGSRQACQTNAVLIGDAMPD------TLD 442
Query: 815 SEFIDI-TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVL 873
+ I+ + +L+ P GLD +T+P GVA+HHAGLT EER ++ + G+++VL
Sbjct: 443 EDIIEKRLDLVASLQSLPCGLDTYFAKTIPRGVAFHHAGLTTEERVLIAEGFDAGILKVL 502
Query: 874 TATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEE 933
AT +LAAG+NLPARRVI R+GR+ + RQM GRAGR G D GE+ L C ++
Sbjct: 503 VATCSLAAGINLPARRVILCGARMGRELVGPAMLRQMRGRAGRKGKDEVGETYLCCTSKD 562
Query: 934 VKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPF 993
+ ++GLL P + S L+ + G+ A+LE +A +V + I+ Y+R +LL
Sbjct: 563 WEDVVGLLEAELPAIASGLAPGRAGIKRALLEAIATKLVSGRDAINDYIRSSLLFHNDEA 622
Query: 994 QDVV-KSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAR 1052
QD + + Q +L+ L K ++ + D + + T LG A S+ P++ L + +L RA
Sbjct: 623 QDTLFEMVQSTLQELLDSKLVKSSND-ETFEPTQLGLAIVASAFSPDDGLFIYGELKRAL 681
Query: 1053 EGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRM 1109
+ FV+ ++H+ Y+ +P+ E DW + + E+ LD S VGV + +
Sbjct: 682 QAFVMDGEMHIFYMFSPLQASSEIDWMAFRD---EVHGLDDSGLRTIRLVGVDPGLVNSI 738
Query: 1110 AHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQET 1169
A G H ++ D LRV R Y A L L E
Sbjct: 739 AMG----------------HASIK------------DPALLRVYNRVYTAFQLRDLSNEI 770
Query: 1170 PVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAE 1229
PV + + + +ARG VQ L +N FA+ ++ FC+R+GW L ++ ++R+ G RA+
Sbjct: 771 PVSSIAKKYNIARGAVQTLAQNCHGFAAGMAKFCQRMGWDMLAVVLEHMRDRLQAGARAD 830
Query: 1230 IVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
++E+ + YVK AR L++ G +T ++AEA+ SE+V L
Sbjct: 831 LLEMAQVTYVKSRTARLLWENGFKTLRSLAEAAPSELVPVLM 872
>gi|342890206|gb|EGU89068.1| hypothetical protein FOXB_00417 [Fusarium oxysporum Fo5176]
Length = 1368
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 279/840 (33%), Positives = 434/840 (51%), Gaps = 113/840 (13%)
Query: 490 AGTPSSSGMLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYC 547
A TP+SS + L S++ LP ++ + GI ++YPWQ CL G+L +NLVYC
Sbjct: 91 AATPTSSCDPELELSHSTYSLPQQLVDNFASLGIKQIYPWQKSCLKGPGLLTGEKNLVYC 150
Query: 548 ASTSAGKSFVAEILMLRRLIS-TGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRS--- 603
A T GKS VA++LML+R++ G ALLVLPYV++ EK L +++ G H S
Sbjct: 151 APTGGGKSLVADVLMLKRILEEKGTKALLVLPYVALVQEKVRWLRSVVQ--GLHFASETT 208
Query: 604 ------------------YYGNQGGGSLPK---DTSVAVCTIEKANSLVNRMLEEGRLSE 642
G GGG + D + VCT+EKAN+LVN +++ +S+
Sbjct: 209 VDDDKRIWRRRADENTVRVIGFFGGGKVRATWADFDIGVCTLEKANALVNTAIDDCSISK 268
Query: 643 IGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQI 702
+ +V+DELHMV D +RGYLLEL+ TKL +QI
Sbjct: 269 LRAVVLDELHMVDDDHRGYLLELVATKL-----------------------LSLEQRVQI 305
Query: 703 VGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY------------------ 744
VGMSAT+PN+ +A WL YET +RPVP+EE++ IY
Sbjct: 306 VGMSATLPNMDMMARWLDGHCYETRYRPVPIEEHLVYDGNIYPAGSTSSLIKTATQLNSR 365
Query: 745 ----SKKMDVVRTILTAANLGGKDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+M +R I + + +DP + +V L E G L+F SR CES AR
Sbjct: 366 STQTQAQMRPIRRIEPSTHKELRDPVLNAVVTLAHETAFAGFGALVFAGSRGMCESDARW 425
Query: 799 VSKFLKKFSINVHSSDSEFIDI-TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEE 857
+S+ + + H ++ ++ + LR G+DPVLEET+ GVA+HHAGLT EE
Sbjct: 426 ISRAMPQ----PHELKADVVNRRMDLLGELRSLNTGVDPVLEETVLYGVAFHHAGLTTEE 481
Query: 858 REVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRT 917
R+++ Y G + V AT +LAAG+NLPARRVI R+GR+F+ + RQM GRAGR
Sbjct: 482 RDLIAAAYDSGTLLVCVATCSLAAGINLPARRVILHNCRMGREFVGPSMLRQMRGRAGRQ 541
Query: 918 GIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAED 977
G + GE+ L + ++++++ L+N PP+ SCL+ + + A+LEV++ + + E
Sbjct: 542 GKASIGETYLCSRENDLEQVVELMNAELPPVASCLNTENRRIQRALLEVISIRLATSRES 601
Query: 978 IHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLC 1037
I Y +LL T + V SL + F+ ++ +++ T LGRA S++
Sbjct: 602 IMDYFSKSLLIHTHSAKFVNDCITSSLEEIESMGFVT-SDSLSMFTATQLGRAIVASAID 660
Query: 1038 PEESLIVLDDLSRAREGFVLASDLHLVYLSTPIN-VEVEPDWELYYERFLELSALDQS-- 1094
P++ + V ++L RA + FV+ ++H++Y TP+ V +W+++ E+ LD+S
Sbjct: 661 PDDGVFVHNELGRALQAFVMDGEMHVLYTFTPVQEFGVMVNWQVFRN---EMEGLDESGL 717
Query: 1095 -VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVC 1153
V +G+ ++++A GA L ++T + Q RV
Sbjct: 718 RVLRLLGIKPTTILKLAQGA------TLHETTP------------------EEKQVARVH 753
Query: 1154 KRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEG 1213
+RFY+AL L L E P+ V + V RGMVQ L + FA+ + FCE++ W +
Sbjct: 754 RRFYLALQLRDLCNEIPIHIVARKYDVPRGMVQNLSQTCQGFAAGMIKFCEQMSWGVMAA 813
Query: 1214 LIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFES 1273
+ F +R+ G RA+++ L IP++K AR ++ G RT IA A +E++ L ++
Sbjct: 814 ALEHFSDRLVAGARADLLALAKIPFIKSRTARVFWENGFRTVATIANADPTELLPILMQA 873
>gi|326481273|gb|EGE05283.1| DNA-directed DNA polymerase theta [Trichophyton equinum CBS 127.97]
Length = 920
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 266/822 (32%), Positives = 421/822 (51%), Gaps = 122/822 (14%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+ + + G++ +YPWQ CL G L +NLVY A T GKS VA++LML+R++
Sbjct: 114 LPTALVKNFSSLGVNAIYPWQASCLLGRGHLSGEKNLVYSAPTGGGKSLVADVLMLKRIL 173
Query: 568 ST-GKMALLVLPYVSICAEKAEHLEVLLEPLGR--------------------------- 599
+ K A+LVLPYV++ EK + L ++E + R
Sbjct: 174 TCPDKKAILVLPYVALVQEKLKWLRRVVEGIPRCTHDDDTDNSADGARESSRLKSEENFI 233
Query: 600 HVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNR 659
V ++G + DT VAVCTIEKANSLVN +E+ + ++G+IV+DELHM+ D++R
Sbjct: 234 RVTGFFGGSKARTTWSDTDVAVCTIEKANSLVNSAIEDCTIDKLGVIVLDELHMLDDEHR 293
Query: 660 GYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWL 719
GYL+E+++TKL + +QI+GMSAT+ N +A WL
Sbjct: 294 GYLIEIMVTKLLLLQQD-----------------------IQIIGMSATLSNTEVLAKWL 330
Query: 720 QAALYETNFRPVPLEEYIKVGNAIYS--------KKMDVVRTILTAAN------------ 759
A Y + +RP+P+EE++ + IY +KM +R ++ N
Sbjct: 331 NANYYISRYRPIPVEEFLVFEDYIYPVPTTKGLLRKM--IRPDTSSPNDVPASACRVIRK 388
Query: 760 -----LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSD 814
L P+ +V L E G+ L+FC SR+ C++ A + + + D
Sbjct: 389 SEFRELAFPIPNAMVALACETAAAGYGALVFCGSRQACQTNAVLIGDAMPD------TLD 442
Query: 815 SEFIDI-TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVL 873
+ I+ + +L+ P GLD +T+P GVA+HHAGLT EER ++ + G+++VL
Sbjct: 443 EDIIEKRLDLVASLQSLPCGLDTYFAKTIPRGVAFHHAGLTTEERVLIAEGFDAGILKVL 502
Query: 874 TATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEE 933
AT +LAAG+NLPARRVI R+GR+ + RQM GRAGR G D GE+ L C ++
Sbjct: 503 VATCSLAAGINLPARRVILCGARMGRELVGPAMLRQMRGRAGRKGKDEVGETYLCCTSKD 562
Query: 934 VKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPF 993
+ ++GLL P + S L+ + G+ A+LE +A +V + I+ Y+R +LL
Sbjct: 563 WEDVVGLLEAELPAIASGLAPGRAGIKRALLEAIATKLVSGRDAINDYIRSSLLFHNDEA 622
Query: 994 QDVV-KSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAR 1052
QD + + Q +L+ L K ++ + D + + T LG A S+ P++ L + +L RA
Sbjct: 623 QDTLFEMVQSTLQELLDSKLVKSSND-ETFEPTQLGLAIVASAFSPDDGLFIYGELKRAL 681
Query: 1053 EGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRM 1109
+ FV+ ++H+ Y+ +P+ E DW + + E+ LD S VGV + +
Sbjct: 682 QAFVMDGEMHIFYMFSPLQASSEIDWMAFRD---EVHGLDDSGLRTIRLVGVDPGLVNSI 738
Query: 1110 AHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQET 1169
A G H ++ D LRV R Y A L L E
Sbjct: 739 AMG----------------HASIK------------DPALLRVYNRVYTAFQLRDLSNEI 770
Query: 1170 PVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAE 1229
PV + + + +ARG VQ L +N FA+ ++ FC+R+GW L ++ ++R+ G RA+
Sbjct: 771 PVSSIAKKYNIARGAVQTLAQNCHGFAAGMAKFCQRMGWDMLAVVLEHMRDRLQAGARAD 830
Query: 1230 IVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
++E+ + YVK AR L++ G +T ++AEA+ SE+V L
Sbjct: 831 LLEMAQVTYVKSRTARLLWENGFKTLRSLAEAAPSELVPVLM 872
>gi|327296790|ref|XP_003233089.1| DNA-directed DNA polymerase theta [Trichophyton rubrum CBS 118892]
gi|326464395|gb|EGD89848.1| DNA-directed DNA polymerase theta [Trichophyton rubrum CBS 118892]
Length = 922
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 284/895 (31%), Positives = 450/895 (50%), Gaps = 131/895 (14%)
Query: 443 SDVQEKDSVLIVHE-RKLDISSQGIDSITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKD 501
S Q ++V H+ R+L S ID I++ + + +E S S+ G ++
Sbjct: 45 SRAQRTNTVQYAHDNRRLRPSR--IDLISNSGNSEFSRSQNLSEYSQRTSVSSTPGPAQN 102
Query: 502 -CLDLSS---WLPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSF 556
L LS LP+ + + G++ +YPWQ CL G L +NLVY A T GKS
Sbjct: 103 PILSLSHPKYGLPTALVKNFASLGVNAIYPWQASCLLGRGHLSGEKNLVYSAPTGGGKSL 162
Query: 557 VAEILMLRRLIST-GKMALLVLPYVSICAEKAEHLEVLLEPLGR---------------- 599
VA++LML+R+++ K A+LVLPYV++ EK + L ++E + R
Sbjct: 163 VADVLMLKRILTCPDKKAILVLPYVALVQEKLKWLRRVVEGIPRCTHDDVGDVDNSADGA 222
Query: 600 -------------HVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGII 646
V ++G + DT VAVCTIEKANSLVN +E+ + ++G+I
Sbjct: 223 RRSSRLKSEENFIRVTGFFGGSKARTTWSDTDVAVCTIEKANSLVNSAIEDCTIDKLGVI 282
Query: 647 VIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMS 706
V+DELHM+ D++RGYL+E+++TKL + +QI+GMS
Sbjct: 283 VLDELHMLDDEHRGYLIEIMVTKLLLLQQD-----------------------IQIIGMS 319
Query: 707 ATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS--------KKMDVVRTILTAA 758
AT+ N +A WL A Y + +RP+P+EE++ + IY +KM +R ++
Sbjct: 320 ATLSNTEVLAKWLNANYYISRYRPIPVEEFLVFEDYIYPVPTTKGLLRKM--IRPDTSSP 377
Query: 759 N-----------------LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSK 801
N L P+ +V L E G+ L+FC SR+ C++ A +
Sbjct: 378 NDVPASACRVIRKSEFRELAFPIPNAMVALACETAAAGYGALVFCGSRQACQTNAVLIGD 437
Query: 802 FLKKFSINVHSSDSEFIDI-TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREV 860
+ + D++ I+ + +L+ P GLD +T+P GVA+HHAGLT EER +
Sbjct: 438 AMPD------TLDADIIEKRLDLVASLQSLPCGLDAYFAKTIPRGVAFHHAGLTTEERVL 491
Query: 861 VETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGID 920
+ + G+++VL AT +LAAG+NLPARRVI R+GR+ + RQM GRAGR G D
Sbjct: 492 IAEGFDAGILKVLVATCSLAAGINLPARRVILCGARMGRELVGPAMLRQMRGRAGRKGKD 551
Query: 921 TKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHR 980
GE+ L C ++ + ++GLL P + S L+ + G+ A+LE +A +V + I+
Sbjct: 552 EVGETYLCCTNKDWEDVVGLLEAELPAIASGLAPGRAGIKRALLEAIATKLVSGRDAIND 611
Query: 981 YVRCTLLNSTKPFQDVV-KSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPE 1039
Y+R +LL QD + + Q +L+ L K ++ + D + + T LG A S+ P
Sbjct: 612 YIRSSLLFHNDEAQDTLFEMVQSTLQELLDSKLVKSSND-ETFEPTQLGLAIVASAFSPN 670
Query: 1040 ESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQS---VG 1096
+ L + +L RA + FV+ +LH+ Y+ +P+ E DW + + E+ LD S
Sbjct: 671 DGLFIYGELKRALQAFVMDGELHIFYMFSPLQASSEIDWMAFRD---EVHGLDDSGLRTI 727
Query: 1097 NQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRF 1156
VGV + +A G H ++ D LRV R
Sbjct: 728 RLVGVDPGLVNSIAMG----------------HASIK------------DPALLRVYTRV 759
Query: 1157 YVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIA 1216
Y A L L E PV + + + +ARG VQ L +N FA+ ++ FC+R+GW L ++
Sbjct: 760 YTAFQLRDLSNEIPVSSIAKKYNIARGAVQTLAQNCHGFAAGMAKFCQRMGWDMLAVVLE 819
Query: 1217 KFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
++R+ G RA+++E+ + YVK AR L++ G +T ++AEA+ SE+V L
Sbjct: 820 HMRDRLQAGARADLLEMAQVTYVKSRTARLLWENGFKTLRSLAEAAPSELVPVLM 874
>gi|119626340|gb|EAX05935.1| DNA helicase HEL308, isoform CRA_b [Homo sapiens]
Length = 1144
Score = 429 bits (1102), Expect = e-116, Method: Compositional matrix adjust.
Identities = 279/808 (34%), Positives = 429/808 (53%), Gaps = 102/808 (12%)
Query: 528 WQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKA 587
WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+ K L++LPYV+I EK
Sbjct: 382 WQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEKI 441
Query: 588 EHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTIEKANSLVNRMLEEGRLSEIG 644
L LG V Y G++G K S+ + TIEK +SLVN ++E GR+ +G
Sbjct: 442 SGLSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATIEKGHSLVNSLIETGRIDSLG 501
Query: 645 IIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVG 704
++V+DELHM+ + +RG LE+ L K+ Y TS ++ QI+G
Sbjct: 502 LVVVDELHMIGEGSRGATLEMTLAKILY-----TSKTT------------------QIIG 538
Query: 705 MSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS------KKMDVVRTI--LT 756
MSAT+ NV + +LQA Y + FRPV L+EY+K+ + IY M R +
Sbjct: 539 MSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKY 598
Query: 757 AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSE 816
+ L DPDH+V L EV+ +S L+FC S+K CE+ A + KFL K + +
Sbjct: 599 SDTLKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCENVAEMICKFLSKEYLKHKEKEK- 656
Query: 817 FIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
I L+ G L PVL+ T+P GVAYHH+GLT +ER+++E Y G++ + T
Sbjct: 657 ----CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTC 712
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVK 935
TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GRAGR GIDT GES+LI + ++ +
Sbjct: 713 TSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQEKDKQ 772
Query: 936 KIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTK 991
+++ L+ + PL +C S E G+ L ++ I +DI+ ++ T +
Sbjct: 773 QVLELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQ 829
Query: 992 PFQDVVKS----AQDSLRWLCHRKFLEWN------EDTKL-YSTTPLGRAAFGSSLCPEE 1040
KS +SLR+L + L+ + E+ + + T LGRA+F ++
Sbjct: 830 KVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAY 889
Query: 1041 SLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQ 1098
I+ DL + EG VL S LHL+YL+TP ++ + PDW +Y+ +F +LS +Q+V
Sbjct: 890 CDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDWMIYFRQFSQLSPAEQNVAAI 949
Query: 1099 VGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYV 1158
+GVSE ++ + A G + GK + N V R Y+
Sbjct: 950 LGVSESFIGKKASGQAI--------------GK-----KVDKN----------VVNRLYL 980
Query: 1159 ALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAK 1217
+ +L L++ET + V E F + RG +Q L F+S V FCE L ++ L+ +
Sbjct: 981 SFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHFCEELEEFWVYRALLVE 1040
Query: 1218 FQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWI 1277
++++ V+AE++ L + V RA+ LY AG ++ + +A A+ +V+ I
Sbjct: 1041 LTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANANPEVLVRT-------I 1093
Query: 1278 AEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
RR AK+I + A+ ++ EKAE
Sbjct: 1094 DHLSRR----QAKQIVSSAKMLLHEKAE 1117
>gi|327273022|ref|XP_003221282.1| PREDICTED: helicase POLQ-like [Anolis carolinensis]
Length = 1120
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 283/834 (33%), Positives = 445/834 (53%), Gaps = 115/834 (13%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+++ + + R I KLY WQ CL ++ + QR+NL+Y TS GK+ VAEIL+L+ L+
Sbjct: 348 LPTKVKELLLQFRKIEKLYDWQHTCLTLESLQQRKNLIYSLPTSGGKTLVAEILILQELL 407
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
L++LPYV+I EK + LG V Y G++G +P K S+ V
Sbjct: 408 CKQMDVLMILPYVAIVQEKVGGMSGFGMELGFLVEEYAGSKG--RIPPIKRRKKKSLYVA 465
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E R+ ++G++V+DELHM+ + NRG +LE+LL K+ Y TS ++
Sbjct: 466 TIEKGHSLVNSLIEADRIGDLGLVVVDELHMLGEGNRGAILEMLLAKILY-----TSKTT 520
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +L+A Y + FRPV L+E++K+ ++
Sbjct: 521 ------------------QIIGMSATLSNVEDLQQFLKADYYTSTFRPVELKEFVKIKDS 562
Query: 743 IYS------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY + R + +++L DPDH++ L EV+ +S L+FC ++K CE+
Sbjct: 563 IYEVDSKAENGLTFCRLLEFKYSSSLQKVDPDHLIALVTEVIP-NYSCLVFCPTKKNCEN 621
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
A + K L + H + E D+ D C L PVL+ T+P G+AYHH+GLT
Sbjct: 622 VAEMICKHLNREY--RHLKEKEKRDLIK--DLTNICNGKLCPVLKRTIPFGIAYHHSGLT 677
Query: 855 VEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA 914
+ER+ +E Y G++ +LT TSTLAAGVNLPARRVI R P +G +F+ +Y+QM GRA
Sbjct: 678 SDERKRIEEAYSSGILCLLTCTSTLAAGVNLPARRVILRAPYVGTEFLKKNQYKQMVGRA 737
Query: 915 GRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGG 970
GR GID GES+LI + ++ + L+ PL SC S E G+ +L +V
Sbjct: 738 GRAGIDKAGESILIAQEKDRHLVQNLIYS---PLESCYSKLLIELNKGIRSLLLSLVGLK 794
Query: 971 IVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKL--------- 1021
I E++++++ TL + K+ +D + LEW +D L
Sbjct: 795 IANNPEEVYQFMLITLFSVQPQLLPTEKTLRD-----VTTEVLEWLKDKALLKEKASCDG 849
Query: 1022 -------YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV-- 1072
TPLG+A + S+ + DL + EG +L S LHL+YL+TP +
Sbjct: 850 IQSFQSNLEITPLGQATYKGSVDLAHCNALYADLKKGLEGLILESCLHLLYLTTPYEMTS 909
Query: 1073 EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKL 1132
+ PDW +Y++ + +LS ++Q V + VGV E ++M+ A G
Sbjct: 910 QCTPDWMVYFKEYSQLSPVEQHVADLVGVPESFIMKKASGQ------------------- 950
Query: 1133 EYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENA 1192
GI + D++T+ R Y++ IL L++ET + V E F ++RG +Q L +A
Sbjct: 951 ----GIKKD---VDSKTV---TRLYLSFILLSLLKETNIWRVAEKFNLSRGFIQTLLNSA 1000
Query: 1193 GRFASMVSVFCERLG-WYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAG 1251
F+S V FCE L ++ + L+ + ++S+ V+AE++ L + V +RA+ LY +G
Sbjct: 1001 SSFSSSVLHFCEELNEFWVYKALLTELTKKLSYCVKAELIPLMEVNGVLEARAKQLYNSG 1060
Query: 1252 LRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+T +A A +VK + E R Q A++I + A+ ++ EKAE
Sbjct: 1061 YKTLSQLANADPEVMVKTI--------EHLSRKQ---ARQIVSSAKMLLTEKAE 1103
>gi|156394395|ref|XP_001636811.1| predicted protein [Nematostella vectensis]
gi|156223918|gb|EDO44748.1| predicted protein [Nematostella vectensis]
Length = 771
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 277/782 (35%), Positives = 425/782 (54%), Gaps = 86/782 (10%)
Query: 509 LPSEICSIY-KKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ ++ RGI LY WQ CL + + ++RNL+Y TS GK+ VAEILM++ L+
Sbjct: 4 LPIKVKDLFLAYRGIQNLYEWQDACLKLPAIQEKRNLIYSLPTSGGKTLVAEILMMKELL 63
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K +LVLP+VSI EK + + LG V Y G++G K ++ + TI
Sbjct: 64 VHHKDVVLVLPFVSIVQEKVKTITQFAVELGFVVEEYAGSKGKFPPRKRRTKRALYIATI 123
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQN-RGYLLELLLTKLRYAAGEGTSDSSS 683
EKANSLVN ++EE R+ ++G+IV+DELHM+ + RG LE+ L K ++
Sbjct: 124 EKANSLVNSLIEEKRMDDLGLIVVDELHMLGEGGGRGATLEMCLAKTLFSTNH------- 176
Query: 684 GENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAI 743
+QIVGMSAT+ N+ + +L A +Y +FRPV L+EY+KV N +
Sbjct: 177 ----------------IQIVGMSATLSNIGDLQKFLMAEVYSNDFRPVELQEYVKVDNIV 220
Query: 744 Y-----SKKMDVVRTILTAANLGG-------KDPDHIVELCDEVVQEGHSVLIFCSSRKG 791
Y S K + + +G KDPDH+V L EV+ + HS LIFC+++K
Sbjct: 221 YKVPCSSSKSEADEIYVQVRRIGHSPDQRHIKDPDHLVPLVLEVIPQ-HSCLIFCATKKN 279
Query: 792 CESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHA 851
CE+ A+ + +FL + V + + AL GL PVL++++P G+AYHH+
Sbjct: 280 CENVAKLMVEFLPREMTQVKIGER-----MELLQALHHQANGLCPVLKKSVPYGIAYHHS 334
Query: 852 GLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMA 911
GLT++ER+++E Y +G++ LT TSTLAAGVNLPA+RVI R P IGR+ I ++Y+QM
Sbjct: 335 GLTMDERKLIEDAYSQGVLCALTCTSTLAAGVNLPAKRVILRAPYIGRNIIRKSQYKQMI 394
Query: 912 GRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS-EDKNGMTHAILEVVAGG 970
GRAGR GID+ GES+LI K + K+ L + S L ++ G+ L ++
Sbjct: 395 GRAGRAGIDSTGESILIIKTTDKHKVAPLFSGEFDSCQSSLPYQEYKGLRTLFLTLLGLK 454
Query: 971 IVQTAEDIHRYVRCTLL--NSTKPFQDVVKSAQDSLRWLC---HRKFLEWNEDTKLYSTT 1025
I QT ++ ++ TL+ F D + A ++LR L H K ++ ED K+ T
Sbjct: 455 ICQTKSELVSFLSRTLMAIQLGDSF-DADQHATEALRTLVSLGHVKAVDDCEDHKI-EIT 512
Query: 1026 PLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYE 1083
PLGRA + SL +++ V ++ RA VL ++LHL+YL+TP++ ++PDW Y
Sbjct: 513 PLGRATYKGSLDIDDTPSVYSEIKRAMGAMVLTNELHLLYLTTPLDQGGTIQPDWMAYQR 572
Query: 1084 RFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNM 1143
L +Q +GV++ YL+ A+G R TK G+
Sbjct: 573 EVATLGPEEQKAAGHIGVTDLYLLGRAYG---------RKLTKCPVGE------------ 611
Query: 1144 LSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFC 1203
V RFY++L+L +L+Q + + V F+V+RG VQ L +A +AS + F
Sbjct: 612 -------EVVHRFYLSLMLYKLMQGSSMWHVSSVFQVSRGFVQNLLTSAASYASCLVRFT 664
Query: 1204 ERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLR--TPLAIAEA 1261
E ++ ++ L+ ++S+ E++ L + VK +RAR LYKAG R + LA AE
Sbjct: 665 EAKEFWTIKLLLEAMVRKLSYTTHLELIPLMEVAGVKQARARQLYKAGYRNLSDLAWAEP 724
Query: 1262 SI 1263
++
Sbjct: 725 AV 726
>gi|340382571|ref|XP_003389792.1| PREDICTED: helicase POLQ [Amphimedon queenslandica]
Length = 892
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 289/842 (34%), Positives = 438/842 (52%), Gaps = 101/842 (11%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + +KK RGI +LY WQ +CL + GV NL+Y TS GK+ VAEIL+L++++
Sbjct: 121 LPLTVQECFKKNRGIEQLYDWQNKCLSLPGVAAGNNLIYSLPTSGGKTLVAEILILQQIM 180
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K L +LPYVSI EK L E L V Y ++G LP K ++ +
Sbjct: 181 LKYKDVLFILPYVSIVQEKVRELLPFAEELSFAVEEYASSKG--RLPPVRKRKKNTIFIA 238
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK N+L+N ++E RL IG++VIDELHM+ RG +LE + KL + TS S
Sbjct: 239 TIEKGNALINSLIEINRLDSIGLVVIDELHMIGGGQRGAVLESCIIKLLF-----TSVS- 292
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
+Q+VGMSAT+ N+ +A +++A L+ NFRPV L EYIK+G +
Sbjct: 293 -----------------VQLVGMSATLSNLHEIASFMRAELFTGNFRPVELNEYIKLGQS 335
Query: 743 IYS--------KKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IYS ++ + +L DPD +V L EV S LIFCS++K CE+
Sbjct: 336 IYSIGRREGLTSGVEPIFKRRIVGSLNKVDPDQLVGLVSEV--SPSSCLIFCSTKKNCEN 393
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
A +SK L K + + + + I LR AGL PVL +TLP G+AYHH+GLT
Sbjct: 394 VALMISKGLPKSAKSTKEKERRML-----IQQLRIEAAGLCPVLAQTLPYGIAYHHSGLT 448
Query: 855 VEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA 914
+ER+V+E Y G++ V+T TSTLAAGVNLPARRVI RQP IG+DFI + Y+QMAGRA
Sbjct: 449 GDERKVIEEGYTSGILSVITCTSTLAAGVNLPARRVIIRQPYIGQDFISLSSYKQMAGRA 508
Query: 915 GRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSED-KNGMTHAILEVVAGGIVQ 973
GR+G+ KGES++I +P++ + + +L++ C SCL D + T IL ++A I++
Sbjct: 509 GRSGLCDKGESIVILQPKDEARFLSVLSKPCDKCTSCLLLDNQQPFTSLILSLIALKILK 568
Query: 974 TAEDIHRYVRCTLLNST--------KPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTT 1025
++ DI +++CTLL S K D++ S S + R+ E + Y T
Sbjct: 569 SSSDISPFLQCTLLFSQDHDEASLKKHCNDIISSLTSS-ELISLREEEREGEKIQHYEIT 627
Query: 1026 PLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYE 1083
+GR + +S V L A+ +L +DLHL+ + P ++ ++PDW+ Y+E
Sbjct: 628 NIGRGVHKGCITVSDSSSVYKSLQTAQSNLILTNDLHLLTVVVPNSLIQSIKPDWKAYFE 687
Query: 1084 RFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNM 1143
+ LS ++ V + +S L G + +T +M
Sbjct: 688 KVSRLSPDEERVADLYNISIGVLAGRYTGRNTK---------------------MTEGDM 726
Query: 1144 LSDAQTLRVCKRFYVALILSRLVQETP----VLEVCETFKVARGMVQALQENAGRFASMV 1199
V RFYV L+L L++ + V V F +RG +Q++ + +S +
Sbjct: 727 C-------VYIRFYVGLMLYSLLRASVSTDGVWVVASRFGCSRGYLQSVVQQTCSHSSCL 779
Query: 1200 SVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIA 1259
F E + + L+ ++S+ V ++ L IP +K RAR L +AG+R+PL +
Sbjct: 780 VHFTELPELWPFKLLLPPIVQKLSYSVSYNLLSLMEIPGMKQGRARQLVQAGIRSPLDLV 839
Query: 1260 EASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEEARIAAFSAFKSLG 1319
E S S++ K + + +G A K+ A+ ++ EKAE A+ + +
Sbjct: 840 EYSPSDLSKLI-----------EHLYVGQAGKLIKSAQSLLAEKAELLEDEAYELLQKIS 888
Query: 1320 LN 1321
LN
Sbjct: 889 LN 890
>gi|390346488|ref|XP_796097.3| PREDICTED: helicase POLQ-like isoform 2 [Strongylocentrotus
purpuratus]
gi|390346490|ref|XP_003726564.1| PREDICTED: helicase POLQ-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 1173
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 280/796 (35%), Positives = 426/796 (53%), Gaps = 97/796 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ + K RGIS+LY WQ ECL V + RNL+Y TS GK+ VAEI+++++++
Sbjct: 419 LPRKVQELLDKHRGISQLYEWQDECLSQQAVKEGRNLIYSLPTSGGKTLVAEIIIMQQIL 478
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K ALL+LP+VSI EK L L LG V Y G++G S+P ++ VC
Sbjct: 479 CHQKDALLILPFVSIVQEKVTSLTPLAVDLGFLVEEYAGSKG--SVPPRKRRNKHALYVC 536
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQ-NRGYLLELLLTKLRYAAGEGTSDS 681
TIEKA++LVN M++E R+ EIG++V+DELHMV + RG LE+ L+KL Y
Sbjct: 537 TIEKAHTLVNCMIQEDRMREIGLVVVDELHMVGEGGRRGASLEICLSKLLYL-------- 588
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN 741
QI+GMSAT+ N+ +A +L+A +Y FRPV L EYIK+ +
Sbjct: 589 ----------------EKCQILGMSATLSNIKDLASFLKAEVYTNTFRPVDLIEYIKLED 632
Query: 742 AIYS----------KKMDVVRTIL--TAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSR 789
I+ +K VRTI + ++ DPDH+V L EV+ +S L FC+++
Sbjct: 633 NIFQVNPGSNLPEDEKFTHVRTITFPYSKSMLKNDPDHLVGLALEVI-PTNSCLFFCATK 691
Query: 790 KGCESTARHVSKFL-----KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPS 844
K C++ A ++ +++ K+ + H E + + R C L P L T+P
Sbjct: 692 KNCQNVAENICRYIPRTKAKQLFQHKHKEKEELL-----LSLRRECDNNLCPTLRRTIPY 746
Query: 845 GVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDG 904
G AYHH GLT++ER+++E Y G + +L ATSTLAAGVNLPA+RVI R P I R+ +
Sbjct: 747 GAAYHHGGLTMDERKLIEDAYSDGTLCLLAATSTLAAGVNLPAKRVILRSPYIARELLTT 806
Query: 905 TRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMT 960
+RY+QM GRAGR G DT GES+LI KP+E K + +LN P++ C S ++ GM
Sbjct: 807 SRYKQMVGRAGRAGKDTSGESILIVKPKERKLVSEMLN---GPINGCFSSLMHDEGKGMR 863
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTL--LNSTKPFQDVVKSAQDSLRWLCHRKFLEWNED 1018
+ +L +++ I +T + +++ TL + + + +D+V+ AQ++L+ + ++ ED
Sbjct: 864 NLVLSLISLKITRTEGSLQDFIKRTLCGIQAAEFQRDLVELAQNALQQVVDLSLVKKTED 923
Query: 1019 TKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRA-REGFVLASDLHLVYLSTPINV--EVE 1075
L T +G+AAF S+ + + DDL +G VLA+ LHL+YL TP +
Sbjct: 924 NVL-EVTRIGQAAFKGSVDLDMCSTLYDDLKFGCDKGLVLANSLHLLYLVTPYDQIDSAR 982
Query: 1076 PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYR 1135
P+W +Y +F LS + V VGVSE Y+ G S+K LE R
Sbjct: 983 PNWMIYMTQFSSLSDSEHKVAELVGVSEFYMQCKMTGR----------SSKKFTPALERR 1032
Query: 1136 LGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRF 1195
RFY+ L+L +++ + EV F RG VQ + +A F
Sbjct: 1033 -----------------AHRFYLTLMLWEMMKRKSIWEVAARFDTPRGFVQTVFTSAASF 1075
Query: 1196 ASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRT 1254
A V FC L ++ + L+ K +++ +++ L IP VK RA+ L AG +T
Sbjct: 1076 AFSVQRFCAELEEFWAVHQLLTKLVYDLTYCATTDLMPLLEIPGVKQGRAKQLVMAGYKT 1135
Query: 1255 PLAIAEASISEIVKAL 1270
+A A +++V +
Sbjct: 1136 LHHLAHADHADLVSKI 1151
>gi|367043996|ref|XP_003652378.1| hypothetical protein THITE_2065919 [Thielavia terrestris NRRL 8126]
gi|346999640|gb|AEO66042.1| hypothetical protein THITE_2065919 [Thielavia terrestris NRRL 8126]
Length = 936
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 275/855 (32%), Positives = 438/855 (51%), Gaps = 115/855 (13%)
Query: 481 PVG------NEKSDEAGTPSSSGMLKDCLDLSS---WLPSEICSIYKKRGISKLYPWQVE 531
PVG +++ A TP+S+ + L LS LPS++ + + GI +YPWQ +
Sbjct: 90 PVGALPSEYSQRQAFAATPTST--IDPLLSLSHPAYGLPSQLVANFAALGIRSIYPWQKQ 147
Query: 532 CLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI-STGKMALLVLPYVSICAEKAEH 589
CL G+L +NLVY A T GKS VA+ILML+R++ S A+LVLPYV++ EK
Sbjct: 148 CLLGPGLLTGEKNLVYSAPTGGGKSLVADILMLKRVLESRDAKAILVLPYVALVQEKVRW 207
Query: 590 LE-----VLLEPLGR-------------------HVRSYYGNQGGGSLPKDTSVAVCTIE 625
L +L LG+ V ++G + D +AVCTIE
Sbjct: 208 LRNVVSNILRGDLGQKEQDDRRKLWARRADKDTIRVVGFFGGSKIKATWADFDIAVCTIE 267
Query: 626 KANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGE 685
KANSLVN +E+ +S + +++DE HM+ D RGYLLEL+ TK+
Sbjct: 268 KANSLVNAAIEDCSISSLRAVILDECHMIDDGYRGYLLELMATKVLCLG----------- 316
Query: 686 NSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS 745
+QI+GMSAT+ N+ + +WLQ YET++RPVP++E++ IY+
Sbjct: 317 ------------QPVQIIGMSATLTNIELLKNWLQGHSYETHYRPVPIDEHLVYEGKIYA 364
Query: 746 K----------------------KMDVVRTILTAANLGGKDP--DHIVELCDEVVQEGHS 781
++ +R I + + KD + +V L +E + G+
Sbjct: 365 AGTTASLLKTVNQLDSRSQFSEPRVQPLRIIRPSDHKELKDAVRNAVVALANEAARAGYG 424
Query: 782 VLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEET 841
VL+F SSR GCES A +S+ + F+ ++ + +D+ + LR GLDP LE+T
Sbjct: 425 VLVFSSSRAGCESDAILISRVMPMFAEVDPATQEKRLDL---LGDLRSLSTGLDPKLEQT 481
Query: 842 LPSGVAYHH-AGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRD 900
+P GVA+H AGLT EERE++ + Y +G+++V AT +LAAG+NLPARRVI R+GRD
Sbjct: 482 IPFGVAFHRKAGLTTEERELITSAYDRGVLKVCVATCSLAAGINLPARRVILHDARMGRD 541
Query: 901 FIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMT 960
F+ RQM GRAGR G D GE+ L C+ +++ ++ L++ P + SCL D+ +
Sbjct: 542 FVGPAMLRQMRGRAGRKGKDEVGETYLCCRQNDLEDVVDLMHADLPQISSCLISDQRRIR 601
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTK 1020
A+LEV+A + + E + YV T+L + + +S + + L +F+ +D
Sbjct: 602 RALLEVIAIRLATSRESLDDYVSKTMLALSAEPDSIRQSIETGIDELRKMEFITRGDDGS 661
Query: 1021 LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE--VEPDW 1078
++T LG+A SSL PE+ L V ++L +A + FV+ ++H++Y TP++ +W
Sbjct: 662 FHATR-LGKAVVASSLDPEDGLFVHNELKKALQAFVMDGEMHVLYNFTPVHDMGGGTVNW 720
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+++ +L V + +G+ + +M HG G
Sbjct: 721 RVFWNEMQQLDDSGLRVMHFLGLKPVTVNKMLHG------------------------GT 756
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
S + + + R RFY+AL L L E P+ V + + V RG VQ L + FA+
Sbjct: 757 LSESTSEEKEVARRYHRFYLALQLRDLCNEMPIHRVAQKYDVPRGSVQTLAQTCQGFAAG 816
Query: 1199 VSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAI 1258
+ FCE +GW + + F +R+ G R++++ L I +VK AR + G +T A+
Sbjct: 817 MIKFCETMGWGAMAAALDHFSDRLRAGARSDLLALAKITFVKSRTARIFWDNGFKTIAAV 876
Query: 1259 AEASISEIVKALFES 1273
A A E++ L ++
Sbjct: 877 ANADPKELLPLLMQA 891
>gi|431916152|gb|ELK16404.1| Helicase POLQ-like protein [Pteropus alecto]
Length = 1040
Score = 425 bits (1093), Expect = e-115, Method: Compositional matrix adjust.
Identities = 281/816 (34%), Positives = 435/816 (53%), Gaps = 102/816 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 281 LPSKVRDLYVQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 340
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 341 CRRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKG--KFPPIKRREKKSLYIA 398
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK + LVN ++E GR+S +G++V+DELHM+ + +RG +LE+ L KL Y TS ++
Sbjct: 399 TIEKGHGLVNSLIETGRISSLGLVVVDELHMIGEGSRGAILEMTLAKLLY-----TSKTT 453
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + ++LQA Y + FRPV L+EY+K+ ++
Sbjct: 454 ------------------QIIGMSATLNNVEDLQEFLQAEYYTSQFRPVELKEYLKINDS 495
Query: 743 I------YSKKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
I M R + + L DPDH+V L EV+ +S L+FC ++K CE+
Sbjct: 496 ICEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVI-PNYSCLVFCPTKKNCEN 554
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + FL K + + + I L+ +G L PVL+ T+P GVAYHH+GL
Sbjct: 555 VAEMICTFLSKEYMKHKEKEKQ-----EVIKNLKNISSGNLCPVLKRTIPLGVAYHHSGL 609
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +ER+++E Y G++ +LT TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GR
Sbjct: 610 TSDERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGR 669
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQ 973
AGR GID+ GES+LI + ++ ++I L++ ++ +S G+ IL
Sbjct: 670 AGRAGIDSVGESILILQEKDKQQIATNLHD----IYHFMSGTFFGVQQKILLKEKSLWEI 725
Query: 974 TAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKL-YSTTPLGRAAF 1032
T E + + LL + + +D+ LC E+ E+ + + T LGRA+F
Sbjct: 726 TVESLRYLIEKGLLQKDTILTEKGRMQKDA---LC-----EFKEEFQYSFHITRLGRASF 777
Query: 1033 GSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSA 1090
++ I+ DL + EG VL S LHL+YL+TP ++ + +PDW +Y+ +F +LS
Sbjct: 778 KGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDMAFQRDPDWMIYFRQFSQLSP 837
Query: 1091 LDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTL 1150
+Q+ VGVSE Y+ + A G ++ K D
Sbjct: 838 AEQNAAALVGVSENYIGKKASGQAIK---KKVDKN------------------------- 869
Query: 1151 RVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWY 1209
+ R Y++ IL L++ET + V E F + RG VQ L A F+S V FCE L ++
Sbjct: 870 -IVNRLYLSFILYTLLKETNIWNVSEKFNMPRGYVQNLLTAAATFSSCVLHFCEELEEFW 928
Query: 1210 DLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKA 1269
L+ + ++++ V+AE++ L + V RA+ LY G ++ +A A +++
Sbjct: 929 VYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNGGYKSLAHLANADPEVLIRT 988
Query: 1270 LFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
I RR AK+I + A+ ++ EKAE
Sbjct: 989 -------IDHLSRR----QAKQIVSSAKMLLHEKAE 1013
>gi|345316969|ref|XP_001517710.2| PREDICTED: helicase POLQ, partial [Ornithorhynchus anatinus]
Length = 777
Score = 425 bits (1093), Expect = e-115, Method: Compositional matrix adjust.
Identities = 284/810 (35%), Positives = 426/810 (52%), Gaps = 106/810 (13%)
Query: 528 WQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKA 587
WQ CL + + QR+NL++ TS GK+ VAEILML+ L+ K L++LPYV++ EK
Sbjct: 17 WQHACLTLSSLQQRKNLIFSLPTSGGKTLVAEILMLQELLCRQKDVLMILPYVAVVQEKI 76
Query: 588 EHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSLVNRMLEEGRLSE 642
L L V Y G++G LP + SV V TIEK +SLVN ++E GR+S+
Sbjct: 77 RGLLHFGIELDFLVEEYAGSKG--RLPPVKRRRKRSVFVATIEKGHSLVNALIETGRMSD 134
Query: 643 IGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQI 702
+G++V+DELHM+ + +RG LLE+ L K+ Y TS ++ QI
Sbjct: 135 LGLVVVDELHMIGEGSRGALLEMTLAKILY-----TSQAT------------------QI 171
Query: 703 VGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANL-- 760
+GMSAT+ NV + +L+A Y +FRPV L+EYIK+ + IY D T + L
Sbjct: 172 IGMSATLNNVGDLQQFLRAEYYTGDFRPVELKEYIKINDTIYEVD-DKAEAGFTFSRLLE 230
Query: 761 ----GGK---DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSS 813
G+ DPDH+V L EV+ + HS LIFC ++K CE+ A + KFL K V
Sbjct: 231 YKYSAGQQKLDPDHVVALATEVIPD-HSCLIFCPTKKNCENVAEMICKFLSKEY--VKHR 287
Query: 814 DSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVL 873
+ E D+ + A+ P+L+ T+P G+AYHH+GLT +ER +E Y G++ +L
Sbjct: 288 EKEKADVIRNLRAI--GDGSFCPILKHTVPFGIAYHHSGLTNDERRQIEEAYSAGVICLL 345
Query: 874 TATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEE 933
TSTLAAGVNLPARRVI R P I DF+ +Y+QM GRAGR GIDT GES+LI + ++
Sbjct: 346 ACTSTLAAGVNLPARRVILRAPYISTDFLKKNQYKQMIGRAGRAGIDTVGESILIVQEKD 405
Query: 934 VKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNS 989
+ L+ PL +C S E G+ +L V+ I + E+I+ ++ T
Sbjct: 406 THLVRSLVG---GPLENCYSNLVKEITGGIQSLLLSVIGLKIARNVEEIYHFMGGTFFGV 462
Query: 990 TKPFQDVVKS----AQDSLRWLCHRKFLE----WNEDTKLYS---TTPLGRAAFGSSLCP 1038
+ KS ++SL L + L+ W + + + T LG+A+F +
Sbjct: 463 QQKILSKEKSLWEITRESLECLIKKGLLQGKITWENEEEAHGDLRITRLGQASFKGGIDL 522
Query: 1039 EESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVG 1096
++ +DL R +G VL S LHL+YL TP ++ PDW +Y+ +F LS+ +Q+V
Sbjct: 523 AYYDVLYEDLKRGLQGLVLESCLHLIYLVTPYDMISLCNPDWMIYFRQFSHLSSAEQNVA 582
Query: 1097 NQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRF 1156
+GV E Y+MR A G ++ K D + + RF
Sbjct: 583 EILGVPESYIMRKASGQAIK---KTVDKS--------------------------IVNRF 613
Query: 1157 YVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLI 1215
Y++ +L L++ET + +V E F + RG VQ L A F+S V FCE L ++ GL
Sbjct: 614 YLSFVLYALLRETDIWKVAEKFHLPRGYVQNLLSRAAAFSSCVLRFCEELEEFWVYRGLF 673
Query: 1216 AKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSS 1275
A+ +++F VR E++ L + V +RA L+ AG R+ +A A +V +
Sbjct: 674 AELTKKLTFCVRTELIPLMEVAGVLKARAEQLHGAGYRSLAHLANADPGVLVSTV----- 728
Query: 1276 WIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
R+ A++I + A+ ++ EKAE
Sbjct: 729 ------DRLSRHQARQIISSAQMLLREKAE 752
>gi|400602952|gb|EJP70550.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 932
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 283/846 (33%), Positives = 427/846 (50%), Gaps = 122/846 (14%)
Query: 490 AGTPSSSGMLKDCLDLSSW---LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLV 545
A TPSSS L L LS LP+++ + + GI+ +YPWQ CL G+L RNLV
Sbjct: 96 AATPSSS--LDPELHLSHTVYNLPTQLVANFAALGINHIYPWQRNCLRGPGLLSGERNLV 153
Query: 546 YCASTSAGKSFVAEILMLRRLI-STGKMALLVLPYVSICAEKAEHLEVLLEPL------- 597
YCA T GKS VA++LML+R++ S ALLVLPYV++ EK L L+E L
Sbjct: 154 YCAPTGGGKSLVADLLMLKRILHSRESKALLVLPYVALVQEKVRWLRQLVEGLKYSPAAE 213
Query: 598 --------------GRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEI 643
G V ++G + D + VCT+EKAN L+N +E+ ++++
Sbjct: 214 KDPHAPFSSRPAQDGLRVVGFFGGGKVRATWDDFEIGVCTLEKANMLINTAIEDCSVAKL 273
Query: 644 GIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIV 703
+V+DELHMV D++RGY LEL+ TKL H +QIV
Sbjct: 274 QAVVLDELHMVDDEHRGYTLELIATKL-----------------------LSLEHTVQIV 310
Query: 704 GMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKK---------------- 747
GMSAT+PN+ +A WL A +ET +RPVP+EE++ A+++
Sbjct: 311 GMSATIPNMDLMAKWLNAHSFETRYRPVPIEEHLVCNGAVFAADNPLGLPDTISQLQNGV 370
Query: 748 MDVVRTILTAANLGGKDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKK 805
+ +RTI +++ DP + +V L E G+ VL+F SR ES AR +S+ +
Sbjct: 371 VKAIRTIAPSSHKELSDPVLNAVVTLAHETASAGYGVLVFAGSRGMTESVARCISRVMPD 430
Query: 806 FSINVHSSDSE-FIDITSAIDALRRCPAGLDPVLEETLPSGVAYHH-------------- 850
S +H + E ID+ +D LR P GLD +LEET+ GVA+H
Sbjct: 431 IS-EIHETILEKRIDL---LDELRSLPTGLDHILEETVLFGVAFHRMSSSDFIPCLANFP 486
Query: 851 --AGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYR 908
AG+T EER+++ Y G + V AT +LAAG+NLPARRVI R+GRDF+ R
Sbjct: 487 LDAGITAEERDLIAAAYDSGTLLVCVATCSLAAGINLPARRVILHNARMGRDFVGPAMLR 546
Query: 909 QMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVA 968
QM GRAGR G GE+ L C+ +++ ++ L+ P + SCL+ + + A+LEV+A
Sbjct: 547 QMRGRAGRQGKSPIGETYLCCREADLEPVVQLIKAELPKVMSCLTSENRRVQRAVLEVIA 606
Query: 969 GGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLG 1028
+ + + I Y +LL T+ V + SL+ L + +E ++ Y+ T LG
Sbjct: 607 VRLATSYDSIRFYFAKSLLALTQDLSRVDDDLKASLKDLEGLELIE-SDAFGNYAPTQLG 665
Query: 1029 RAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI-NVEVEPDWELYYERFLE 1087
RA S++ P++ + V +L +A FV+ +LH++Y+ TP+ ++ + +W+++ E
Sbjct: 666 RAIVASAIDPDDGIFVHRELVKALRAFVMDGELHILYVFTPVQDLGITVNWQVFRN---E 722
Query: 1088 LSALDQS---VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNML 1144
L LD S V + + +++ A G P+ N
Sbjct: 723 LQLLDDSGLRVLRFLAIKPTAILKFAQGVPV------------------------PKNTP 758
Query: 1145 SDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCE 1204
+ + RV KRFY+AL L L E PV V + RG VQ L + FA+ V FC+
Sbjct: 759 EEKEMSRVYKRFYLALQLRDLCNEMPVHIVARKYDAPRGSVQTLSQTCHGFAAGVIKFCQ 818
Query: 1205 RLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIS 1264
+ W + + F +R+ G R E++ L IP++K AR ++ G RT IA A
Sbjct: 819 FMDWGLMAAALDHFSDRLLAGARTELLSLAKIPFIKSRTARVFWENGFRTVGTIANADPK 878
Query: 1265 EIVKAL 1270
E+V L
Sbjct: 879 ELVPIL 884
>gi|405969237|gb|EKC34220.1| Helicase POLQ-like protein [Crassostrea gigas]
Length = 1123
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 280/833 (33%), Positives = 444/833 (53%), Gaps = 107/833 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ + +K RGI+ LY WQ CL + + + NLVY TS GK+ VAE+L+L+ L+
Sbjct: 320 LPSKVQELLQKQRGITSLYEWQDRCLKLPSLQKGGNLVYSLPTSGGKTLVAEVLILKELL 379
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP----KDTSVAVCT 623
+ AL++LP+VSI EK + L L L V Y G++G P + + + T
Sbjct: 380 CKKRDALMILPFVSIVQEKVKGLAQLAVELDFLVEEYAGSRG--RFPPIKHRRRCLYIAT 437
Query: 624 IEKANSLVNRMLEEGRLSEIGIIVIDELHMVAD-QNRGYLLELLLTKLRYAAGEGTSDSS 682
IEKA+SLVN +LE+ RL +G++V+DELHM+ + ++RG LE L K+ +A
Sbjct: 438 IEKAHSLVNSLLEQDRLDSLGLVVVDELHMIGEGKSRGACLEATLLKVLHARAPT----- 492
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ N+ + +L+A ++ ++FRPV L EY+K+ +
Sbjct: 493 ------------------QIIGMSATLNNIGDLLSFLKADIFSSDFRPVKLTEYVKLQDN 534
Query: 743 IY--------SKKMDVVRTIL--TAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGC 792
I+ ++D RT+ + + DPDH++ L EV+ + HS LIFC ++K C
Sbjct: 535 IFEVQKGQTLQDRLDHQRTVTFEYSPEMAKVDPDHLLGLVTEVIPQ-HSCLIFCPTKKNC 593
Query: 793 ESTARHVSKFLKKFSINV-HSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHA 851
E+ A +SK + K + E D+ + R + PVL+ T+ G+AYHH+
Sbjct: 594 ENVALMLSKLMAKHRRELSQVRKQERRDLLKEL--YRDGEQRMCPVLQHTIHFGLAYHHS 651
Query: 852 GLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMA 911
GLT +ER+++E Y G++ VL TSTLAAGVNLPA+RVI R P IG F++ ++Y+QM
Sbjct: 652 GLTTDERQLLEAAYTDGVLCVLACTSTLAAGVNLPAKRVILRNPYIGTQFLNRSQYKQMI 711
Query: 912 GRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVV 967
GRAGR G DT GES+LI P++ K+ +++ P+ SC S +D G+ IL +
Sbjct: 712 GRAGRAGKDTTGESILIVSPKDRCKVWDIIS---GPVESCFSSLTYDDGKGIKSLILSSI 768
Query: 968 AGGIVQTAEDIHRYVRCTLLN--STKPFQDVVKSAQDSLRWL------CHRKFLEWNEDT 1019
I T + + + TLL+ ++ D+V +D+L+ L ++ L E+
Sbjct: 769 GLQITSTTKAVFDMMSQTLLSLQASHLSCDIVAMTKDALQQLIDEGLVVQKRSLSQGEEI 828
Query: 1020 KLYS----TTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--E 1073
+ TPLGRA F S+ E S + DL +A E VLAS LHL++L TP ++ +
Sbjct: 829 FCHDPSLEVTPLGRATFKGSIDLEFSTQLYTDLKKAEESLVLASHLHLLFLVTPYDLVKD 888
Query: 1074 VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLE 1133
V P W Y+++ L+ ++ V +GV E Y+ + A G +++ ++ D E
Sbjct: 889 VRPSWMTYFKQISLLTPVELKVAELIGVPEAYVAKKASG---QVTRQVVD---------E 936
Query: 1134 YRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAG 1193
+ V KRFY+ L+L L ++ + EV E F RG +Q L +
Sbjct: 937 F-----------------VVKRFYLTLMLYDLWRQKSLWEVAEKFDQPRGFIQNLLSSTA 979
Query: 1194 RFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGL 1252
F + V FC+ L ++ + L+ F R+++ V AE++ L I VK RAR LY AG
Sbjct: 980 SFGACVYHFCQELEEFWAYQELLGTFVKRLAYCVSAELLPLMEISGVKLGRARQLYSAGF 1039
Query: 1253 RTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+ +A A +V+++ +++ VA++I A+ ++ EKAE
Sbjct: 1040 HSTAQVAAAEPETLVRSI-----------KQIPRKVARQIVASAKLLLNEKAE 1081
>gi|389626699|ref|XP_003711003.1| hypothetical protein MGG_15295 [Magnaporthe oryzae 70-15]
gi|351650532|gb|EHA58391.1| hypothetical protein MGG_15295 [Magnaporthe oryzae 70-15]
Length = 963
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 265/829 (31%), Positives = 417/829 (50%), Gaps = 118/829 (14%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+++ + GI +YPWQ +CL G+L+ +NLVY A T GKS VA++LML+++
Sbjct: 122 LPTQLVQNFASLGIHSIYPWQKQCLLGPGLLRGEKNLVYTAPTGGGKSLVADVLMLKQVA 181
Query: 568 S-TGKMALLVLPYVSICAEKAEHLEVLLEPLGR-------------------------HV 601
+ G ALLVLPYV++ EK L +++ + V
Sbjct: 182 AEPGAKALLVLPYVALVQEKVAWLRQVVQGMASPSSTTDVKNNGKESIWRRRADEDTIRV 241
Query: 602 RSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGY 661
++G D + VCT+EKAN+L N +++ ++++ + V+DELHM+ D +RGY
Sbjct: 242 VGFFGGINIKPRWADFDIGVCTLEKANALANTAIDDCSINQLRVAVLDELHMIDDDHRGY 301
Query: 662 LLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQA 721
L ELL TKL H +QIVGMSAT+ N ++ WL
Sbjct: 302 LFELLSTKLLCLD-----------------------HPIQIVGMSATLANAKLLSTWLCG 338
Query: 722 ALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDP---------------- 765
YET +RPVP+EE++ +YS + TA L G P
Sbjct: 339 HHYETAYRPVPIEEHLVYDGKVYSAAT-TSNLLRTACQLNGTAPISQKPSHPMREVASSS 397
Query: 766 ---------DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSE 816
+ +V L +E G+ VLIF SSR CES A +S+ + +++ D
Sbjct: 398 HKELSSPVLNAVVALANETATLGYGVLIFSSSRAICESNAILISRTMP----SINDIDPY 453
Query: 817 FIDITSAIDA-LRRCPAGLDPVLEETLPSGVAYHH-----AGLTVEEREVVETCYRKGLV 870
+D + A L GLDPVL +T+P GVA+HH AGLT EER++V Y G++
Sbjct: 454 ILDKRKDLLADLASLNCGLDPVLSQTIPYGVAFHHSDFIQAGLTSEERDLVAKAYDNGIL 513
Query: 871 RVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICK 930
++ AT++LAAG+NLPARRVI R+GRD + + RQM GRAGR G D GE+ L C+
Sbjct: 514 KICVATASLAAGINLPARRVILHSARMGRDLVGPSMLRQMRGRAGRKGKDEVGETYLCCQ 573
Query: 931 PEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNST 990
++ ++GL++ P + S L+ D+ + A+LEV+A + + + Y+R TLL +
Sbjct: 574 SSDLDNVLGLMHAELPHVSSSLTTDRQRIQRALLEVIAIRLATSRSSLDDYMRKTLLYHS 633
Query: 991 KPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSR 1050
+++ + SL L KF+ D + Y T LG+A +L PE+ + ++L +
Sbjct: 634 ADVKEIETHVETSLANLEKLKFITMG-DFQTYEATQLGKAIVAGALDPEDGTFIHNELKK 692
Query: 1051 AREGFVLASDLHLVYLSTPI-NVEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYL 1106
A + FV+ DLH++Y TP+ + +W +++ E+ LD+S V +G+ +
Sbjct: 693 ALQAFVMDGDLHVLYTFTPVHDFAANINWRVFWN---EMEGLDESGLRVLKLLGLKPTVI 749
Query: 1107 MRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLV 1166
RM G +R ++ D K L RV +RFY+AL L L
Sbjct: 750 NRMVQGGQLR---QVTDEEKEL---------------------ARVYRRFYMALQLRDLC 785
Query: 1167 QETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGV 1226
E PV V + V RG VQ L +N FA+ + FCE +GW + ++ F +R+ G
Sbjct: 786 NEMPVHVVARKYDVPRGTVQNLAQNCQGFAAGMIKFCEHMGWGAMASVLDHFSDRLKAGA 845
Query: 1227 RAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSS 1275
+++++ L I ++K AR + G ++ ++A A ++V L ++ S
Sbjct: 846 KSDLLSLAKIMFIKSRTARVFWDNGFKSVASVANADPEQLVPILMQAQS 894
>gi|410904054|ref|XP_003965508.1| PREDICTED: helicase POLQ-like [Takifugu rubripes]
Length = 1016
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 270/801 (33%), Positives = 434/801 (54%), Gaps = 100/801 (12%)
Query: 509 LPSEICSI-YKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+++ + + RGI LY WQ CL+++ V +R+NL+Y TS GK+ VAEIL+LR L+
Sbjct: 247 LPTKVKDLLHSLRGIKNLYAWQETCLNLECVQERKNLIYSLPTSGGKTLVAEILILRELL 306
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L +LPY+++ EK L L V Y G++G K +++ + TI
Sbjct: 307 CRRKDCLFILPYITLVQEKVRGLASFGLELDFMVEEYAGSKGKFPPVKRRNKSALYIATI 366
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EKA+SLVN ++E GRL +G++V+DELHM+ D +RG ++E+ L K+ Y
Sbjct: 367 EKAHSLVNSLIETGRLENLGLVVVDELHMLGDGSRGAVIEMTLAKVLYV----------- 415
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY 744
N T QI+GMSAT+ N+ + +L+A Y +FRPV L+EY+K+ ++IY
Sbjct: 416 -NKAT-----------QIIGMSATLGNIRDLQAFLRAENYTNDFRPVQLQEYVKLEDSIY 463
Query: 745 SK--------KMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
+ + ++++ DPDHI+ L EV+ HS L+FC ++K CE+ A
Sbjct: 464 EVDPKEENGFRFSRLLNFKYSSSMQKIDPDHIIALVTEVI-PTHSCLVFCPTKKNCENVA 522
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTV 855
+ ++LK+ + ++ + + L+ G + PVL +T+P G+AYHH+GLT
Sbjct: 523 SMICRYLKEDFLKHREAEKSIL-----LRELKESGNGSMCPVLRKTIPFGLAYHHSGLTS 577
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
EER++VE Y G++ +LT TSTLAAG+NLPARRVI R P + DF+ ++Y+QM GRAG
Sbjct: 578 EERKLVEEAYSTGVLCLLTCTSTLAAGINLPARRVILRSPYVATDFLKRSQYKQMVGRAG 637
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGI 971
R GID+ GES+LI + ++ K L+ C P+ +C S +D G+ IL ++ I
Sbjct: 638 RAGIDSVGESILILQDKDRKMARSLV---CAPMENCYSNLMHDDGKGLLSLILSLIGLNI 694
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYS-------- 1023
+ + + ++ TLL Q A SL W ++ ++ +D L S
Sbjct: 695 ATSVDQMRDFLSGTLLY----VQQEQLCADRSL-WEVVQRCVQHLKDKGLVSVTELSQGH 749
Query: 1024 ---TTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDW 1078
T LGRA + S+ S ++ DL++ +G +L S LHLVYL TP ++ + +P+W
Sbjct: 750 SLQVTKLGRATYKGSVDLAYSKVLYQDLTKGLDGLLLNSFLHLVYLVTPYDILSQCKPEW 809
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
Y +F LS +Q + +GV E +++R G ++ KG+
Sbjct: 810 MTYLRQFSLLSPAEQRMSAAIGVPESFVVRQVAGQTVK---------KGVD--------- 851
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
+ V KR Y+AL+L L++ET + V E F ++RG +Q L ++ F S
Sbjct: 852 -----------MDVVKRMYLALVLFTLLKETNLWSVAEKFHLSRGFIQTLLSSSSAFCSC 900
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V F E L ++ + L+ + R+S+ V AE++ L + V SRA+ LYKAG +T
Sbjct: 901 VLHFAEELEEFWPFKALLTELMRRLSYCVTAELIPLMEVVGVMESRAKQLYKAGYKTLSH 960
Query: 1258 IAE---ASISEIVKALFESSS 1275
+A A++S+ ++ L++ +
Sbjct: 961 LANADPAALSKTIENLYKKQA 981
>gi|198437907|ref|XP_002120889.1| PREDICTED: similar to DNA helicase HEL308 [Ciona intestinalis]
Length = 1014
Score = 415 bits (1066), Expect = e-112, Method: Compositional matrix adjust.
Identities = 275/807 (34%), Positives = 410/807 (50%), Gaps = 100/807 (12%)
Query: 493 PSSSGMLKDCLDLSSWLPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTS 551
P + +L + LPS++ ++ RGI +Y WQ +CL +DGV + RNL+Y TS
Sbjct: 223 PPTQQLLTQDIGPYYGLPSKVKTLLGTLRGIKSVYDWQHKCLTLDGVKEGRNLIYSLPTS 282
Query: 552 AGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGG 611
GK+ VAEIL+ R L+ K A+ VLP+V+I EK + L LG V Y +G
Sbjct: 283 GGKTLVAEILIFRELLCKKKDAVFVLPFVAIVQEKIQSLAQFAVELGFLVEEYAAGKGRF 342
Query: 612 SLPKDTS---VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNR-GYLLELLL 667
K + VCTIEKAN+LVN ++E RLSE+G+IV+DELHM+ + R G +E +L
Sbjct: 343 PPRKRRKRNVLYVCTIEKANTLVNSLVEASRLSELGLIVVDELHMIGEGGRRGSTIETML 402
Query: 668 TKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETN 727
TK+ + +G QI+GMSAT+ N+ + +L A ++ N
Sbjct: 403 TKVMHVSG-----------------------STQIIGMSATLSNLPDLQKFLNADVFTDN 439
Query: 728 FRPVPLEEYIKVGNAIY---------SKKMDVVRTI-LTAANLGGKDPDHIVELCDEVVQ 777
FRPV L+E++KV ++++ ++++ R I + D DHIV L EV+
Sbjct: 440 FRPVALDEFVKVADSVFKVDSATLCPEERLEFHRMIGHQTKEIAKGDTDHIVSLVLEVIP 499
Query: 778 EGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDP 836
+ HS LIFC ++K CE+ A+ + K L + + + + S ++ L C G +
Sbjct: 500 Q-HSCLIFCPTKKNCENVAKMICKLLPRNFL-----EQKVKQKISMLEGL--CNEGEICQ 551
Query: 837 VLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPR 896
VL +P GVAYHH+GLT +ER ++E YR G++ V+T TSTLAAGVNLPARRVI R P
Sbjct: 552 VLRGAIPYGVAYHHSGLTTDERRIIEDGYRNGVLSVITCTSTLAAGVNLPARRVIIRSPH 611
Query: 897 IGRDFIDGTRYRQMAGRAGRTGIDTKGESMLIC-KPEEVKKIMGLLNESCPPLHSCLS-- 953
IGR F+ ++Y+QM GRAGR GIDTKGES LI KP++ K++ L+ P+ +C+S
Sbjct: 612 IGRSFMSRSQYKQMIGRAGRAGIDTKGESFLIVSKPQDQVKVVDLIG---GPVETCISSL 668
Query: 954 --EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNS--------------TKPFQDVV 997
+ G +L ++ I+ D+ + T ++ T +V
Sbjct: 669 MYDSGKGFRTLLLNLIGLKIITKTSDVLNFFSKTFFSTQISTIQEKKPHLLETDESTNVE 728
Query: 998 KSAQDSLRWLCHRKFLEWNEDTK--LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGF 1055
+ + L + +E T + T LG A F SS+ + S + DDL +G
Sbjct: 729 SLSASTTEHLLSVNMIRMDESTNDGSFQVTKLGNATFKSSIDYDISNQLYDDLKNGLQGL 788
Query: 1056 VLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPM 1115
VL + LHL+YL TP + V PDW +Y L + + +G+ E Y+ M
Sbjct: 789 VLENYLHLLYLVTPYDTMVSPDWMVYLNEINRLEPGELAAATVIGIEECYIT-------M 841
Query: 1116 RISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVC 1175
R S + K K++ RFYV L+L+ L + V EV
Sbjct: 842 RASGRNPRKKKANQPKID---------------------RFYVTLMLNLLFKGKSVWEVS 880
Query: 1176 ETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLEGLIAKFQNRVSFGVRAEIVELT 1234
F RG +Q L NA FAS + +F + L + + LI K + + AE+V L
Sbjct: 881 TRFDQPRGFLQNLLSNAAAFASHILLFTKELDELWAYQSLIEKLIQVLQYCTVAELVPLM 940
Query: 1235 TIPYVKGSRARALYKAGLRTPLAIAEA 1261
IP V+ +RA+ L +G +T IA A
Sbjct: 941 EIPGVRMTRAKQLLSSGFKTLAHIATA 967
>gi|310790869|gb|EFQ26402.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 909
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 258/813 (31%), Positives = 416/813 (51%), Gaps = 112/813 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + GI +YPWQ CL G+L RNLVY ILML+R++
Sbjct: 115 LPRPLLRNFHSLGIKIMYPWQKACLRGPGLLSGERNLVY-------------ILMLKRVL 161
Query: 568 -STGKMALLVLPYVSICAEKAEHLEVLLEPLGR---------------------HVRSYY 605
ALLVLPYV++ EK L +++ + + V ++
Sbjct: 162 EDKNAKALLVLPYVALVQEKVRWLRNIVQNVPKPKDEIEHEKRIWRRRADEDSIRVIGFF 221
Query: 606 GNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLEL 665
G D V VCTIEKAN+L+N +++ ++ + +V+DELHM+ D +RGYL+EL
Sbjct: 222 GGSKIKPTWSDFDVGVCTIEKANALINTAIDDCSINHLKAVVLDELHMIDDDHRGYLMEL 281
Query: 666 LLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYE 725
+ TKL +QI+GMSATM N+ +A+WL A YE
Sbjct: 282 IGTKLLTLP-----------------------QPVQIIGMSATMSNINLLANWLGAHSYE 318
Query: 726 TNFRPVPLEEYIKV-GNAIYSKKMD---------------------VVRTILTAANLGGK 763
T +RPVP+EE++ GN + M +R + + + +
Sbjct: 319 TRYRPVPIEEHLVYEGNVYPAATMSELLKTANHLKTGTQPELLTSKAIRRVEPSGHKEFQ 378
Query: 764 DP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDIT 821
DP + +V L E + G+ L+F SSR GCES AR +++ + + + + ID+
Sbjct: 379 DPVLNAVVSLASETARAGYGALVFASSRYGCESDARWIARVMPMQNELDPALVEKRIDL- 437
Query: 822 SAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAA 881
+ LR GLDPVLEET+P GVA+HHAGLT+EER+++ + Y G+++V AT +LAA
Sbjct: 438 --LAELRSLGTGLDPVLEETVPMGVAFHHAGLTIEERDLIASAYDTGVIKVCIATCSLAA 495
Query: 882 GVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLL 941
G+NLPARRVI R+GRDF+ + RQM GRAGR G D GE+ L C+ ++++K++ L+
Sbjct: 496 GINLPARRVILHNARMGRDFVGPSMLRQMRGRAGRKGKDEVGETYLCCRKDDLEKVVDLM 555
Query: 942 NESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQ 1001
+ P + S L+ DK + A+LEV+A + + + + Y+R TLL+ + + + + +
Sbjct: 556 HAEMPHITSGLTTDKQRIQRALLEVIAVRLATSRDSLDEYIRKTLLSHSSSLEALQECVE 615
Query: 1002 DSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDL 1061
SL+ L F+ + Y T LG+A ++L P++ + + +L RA + FV+ ++
Sbjct: 616 ASLQNLQKMDFVV-TDVCGNYQPTTLGKAVVAAALDPDDGVFIHKELERALQAFVMDGEM 674
Query: 1062 HLVYLSTPI-NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSK 1120
H++Y TP+ N +W+++ L V +G+ + ++A G S
Sbjct: 675 HILYTFTPVQNFGTNVNWQVFRNEMENLDDSGHRVLGFLGLKCAMINKLAQG------ST 728
Query: 1121 LRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKV 1180
L+++T + +T+RV +RFY+A L L E P+ V + V
Sbjct: 729 LKETTA------------------EEKETVRVYRRFYMAFQLRDLCNEMPIQAVARKYDV 770
Query: 1181 ARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVK 1240
RG VQ L + FA+ + FCE +GW + + F +R+ G +++++ L I +VK
Sbjct: 771 PRGAVQTLSQTCHGFAAGMIKFCEHMGWGIMAAALDHFSDRLRAGAKSDLLALAQITFVK 830
Query: 1241 GSRARALYKAGLRTPLAIAEASISEIVKALFES 1273
AR ++ G R+ AIA A SE++ L ++
Sbjct: 831 SRTARVFWENGFRSVAAIANADPSELLPVLMQA 863
>gi|239609367|gb|EEQ86354.1| DNA-directed DNA polymerase theta [Ajellomyces dermatitidis ER-3]
Length = 917
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/817 (30%), Positives = 411/817 (50%), Gaps = 130/817 (15%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ + + G++ +YPWQ CL G L +NLVY A T GKS VA++LML+R+I
Sbjct: 133 LPPQLVTNFASLGVNCIYPWQASCLLGRGHLTAEKNLVYSAPTGGGKSLVADVLMLKRVI 192
Query: 568 S-TGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRS----------------------- 603
K A+LVLPYV++ EK + L ++E + +++ +
Sbjct: 193 DDPSKKAILVLPYVALVQEKLKWLRRVVEGVTKNIDTPTTVDEASSVPHWRQPQSSIRVT 252
Query: 604 -YYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
++G + DT +AVCTIEKANSLVN +EE +++++G++V+DELHM+ D++RGYL
Sbjct: 253 GFFGGSKTRATWADTDIAVCTIEKANSLVNTAIEECKINDLGVVVLDELHMLDDEHRGYL 312
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAA 722
+E+++TKL K D +QIVGMSAT+ N +A WL+A
Sbjct: 313 IEIMVTKLMLL-------------------KQD----IQIVGMSATLSNTEVLAKWLRAN 349
Query: 723 LYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTILTAANLGGKDPDH------------- 767
Y + +RP+P+ E++ N IY + + R TA L DP
Sbjct: 350 YYISKYRPIPIREHLVYNNEIYPATSSKEFFR---TATQLNKPDPSQRNSLACRIIDRST 406
Query: 768 -----------IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSE 816
+V L E G+ L+FC SR+ C+S A +S+ + ++
Sbjct: 407 YKELATSTANAMVSLALETALSGYGALVFCGSRQACQSNAILISQAMPDETMLDKDLSER 466
Query: 817 FIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTAT 876
+D+ + + +L P G+DPV ++T+ GVA+HHAGLT EER+++ Y KG++RVL AT
Sbjct: 467 RMDLIAGLQSL---PCGIDPVFQKTVIKGVAFHHAGLTTEERDLIAEAYDKGILRVLVAT 523
Query: 877 STLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKK 936
+LAAG P ++I RQM GRAGR G D GE+ L+C+ ++++
Sbjct: 524 CSLAAG---PMAKLI---------------RRQMRGRAGRKGKDEVGETYLLCQKDDLEA 565
Query: 937 IMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDV 996
+ LL P + S L+ +K G+ A+LE +A +V + E ++ YV CTLL ++
Sbjct: 566 VAELLEAEMPAIASGLTPEKRGIKRALLEAIATRLVSSRETVNEYVTCTLLYQNMETDEL 625
Query: 997 VKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFV 1056
+L+ L ++ +D + + T LG+A SSL PE+ + + D+L RA + FV
Sbjct: 626 FSMVDSTLKELVDHGLVDLKQD-EYFEPTQLGQAVVSSSLSPEDGIFIHDELKRALKSFV 684
Query: 1057 LASDLHLVYLSTPI--NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAP 1114
+ ++H+ Y+ P+ + + DW ++ ++ L VGV ++ +MA
Sbjct: 685 MDGEMHIFYMFAPLQNSAPADIDWSIFRDQMNNLDESGIRALQLVGVEPAFVNKMAQ--- 741
Query: 1115 MRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEV 1174
S + D R+ R Y A L L E P+ +
Sbjct: 742 -------------------------SRTRIKDETLARIYHRAYTAFQLRDLSNEVPISTI 776
Query: 1175 CETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELT 1234
+ + RG VQ L + FA+ + FC+R+GW L ++ ++R+ G RA+++E+
Sbjct: 777 ARKYNIPRGNVQTLTQICHGFAAGIVKFCQRMGWDMLAVVLDHMRDRLQAGARADLLEMA 836
Query: 1235 TIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
+ YVK AR L++ G +T A+AEA +++ L
Sbjct: 837 QVAYVKSRTARLLWENGFKTLRALAEADPKDLLPVLM 873
>gi|402083576|gb|EJT78594.1| hypothetical protein GGTG_03693 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 933
Score = 412 bits (1058), Expect = e-111, Method: Compositional matrix adjust.
Identities = 265/822 (32%), Positives = 413/822 (50%), Gaps = 115/822 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ + GI +YPWQ CL G+L +NLVY A T GKS VA++LML++++
Sbjct: 124 LPRQLVDNFASLGIKSIYPWQKLCLLGPGLLDGEKNLVYTAPTGGGKSLVADLLMLKQIV 183
Query: 568 ST-GKMALLVLPYVSICAEKAEHLEVLLEPLGR------------------------HVR 602
G +LLVLPYV++ EK L ++ + V
Sbjct: 184 QNPGSKSLLVLPYVALVQEKVRWLRGIVRGIAHGGATETKDARENSIWRRRADEDTIRVA 243
Query: 603 SYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
++G D + VCT+EKAN+LVN +E+ ++++G++V+DELHM+ D RGYL
Sbjct: 244 GFFGGSSMKYTWSDFDIGVCTLEKANALVNTAIEDCSINKLGVVVLDELHMIDDDYRGYL 303
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAA 722
ELL TKL +QIVGMSAT+ N ++ WL
Sbjct: 304 FELLATKLLCLE-----------------------QPIQIVGMSATLANANLLSTWLGGH 340
Query: 723 LYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGG-------------------- 762
YET++RPVP+EE++ ++Y I TA+ + G
Sbjct: 341 SYETHYRPVPIEEHLVCDGSVYPAAT-TSNMIRTASQIDGEHRRPSQALSCPTRKIDASS 399
Query: 763 ----KDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSE 816
KDP + +V L +E + G+ VL+F SR CES A +S+ + + D
Sbjct: 400 HKELKDPVLNAVVALANETARSGYGVLVFSGSRAMCESDAMLISRTMPTLA----EVDQV 455
Query: 817 FIDITSAIDA-LRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
+D + A L+ GLDPVL +T+P GVA+H LT EER++V Y G+++V A
Sbjct: 456 AMDRRRELLADLQDLNCGLDPVLLQTIPYGVAFHR--LTSEERDLVAKGYDGGILKVCIA 513
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVK 935
T +LAAG+NLPARRVI R+GR+ + + RQM GRAGR G D GE+ L C+ +++
Sbjct: 514 TCSLAAGINLPARRVILHNARMGRELVGPSMLRQMRGRAGRKGKDEVGETYLCCRATDLE 573
Query: 936 KIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQD 995
++GL++ P + S L D+ + A+LEV+A + + Y+R TLL T
Sbjct: 574 DVLGLMHAELPHVRSSLMTDRQRIQRALLEVIAIKLAAGRASLDDYIRKTLLAQTTDLTT 633
Query: 996 VVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGF 1055
+ + SL L F+ ++ + + T LG+A S+L PE+ + V +L +A + F
Sbjct: 634 IDSLVETSLENLQKMGFIIMDDHSD-FQATQLGKAIVASALDPEDGVFVHKELKKALKAF 692
Query: 1056 VLASDLHLVYLSTPI-NVEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAH 1111
V+ D+H++Y TP+ + + +W +++ E+ ALD+S V +G+ + RM
Sbjct: 693 VMDGDMHILYTFTPVYDFAADINWRVFWN---EMEALDESGLRVLKLLGLKPTEVTRMMQ 749
Query: 1112 GAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPV 1171
G +LR+ST+ + + RV +RFYVAL L L E PV
Sbjct: 750 GG------QLRESTE------------------EEKELARVYRRFYVALQLRDLCNEVPV 785
Query: 1172 LEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIV 1231
V + V RG VQ L +N FA+ + FC+ + W L ++ F +R+ G +A+++
Sbjct: 786 HVVARKYDVPRGAVQNLAQNCQGFAAGMVKFCQHMDWGALSSVLDHFSDRLKAGAKADLL 845
Query: 1232 ELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFES 1273
L I +VK AR + G +T ++IA E+V L ++
Sbjct: 846 SLAQITFVKSRTARVFWDNGFKTVVSIANTDPKELVPILMQA 887
>gi|67524563|ref|XP_660343.1| hypothetical protein AN2739.2 [Aspergillus nidulans FGSC A4]
gi|40743851|gb|EAA63037.1| hypothetical protein AN2739.2 [Aspergillus nidulans FGSC A4]
gi|259486348|tpe|CBF84114.1| TPA: DNA-directed DNA polymerase theta, putative (AFU_orthologue;
AFUA_1G05260) [Aspergillus nidulans FGSC A4]
Length = 901
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 255/782 (32%), Positives = 398/782 (50%), Gaps = 110/782 (14%)
Query: 484 NEKSDEAGTPS-SSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-R 541
NE+ PS S G L+ D LP + + + G++ +Y WQ CL +G+L+ +
Sbjct: 93 NEQKPRPEDPSKSQGSLQSLNDPKFGLPPALVANFAAAGVTSIYQWQASCLLGEGLLKGK 152
Query: 542 RNLVYCASTSAGKSFVAEILMLRRLI-STGKMALLVLPYVSICAEKAEHLEVLLEPLGRH 600
R+L+Y A T GKS VA++LML+R+I + + A+LVLPYV++ EK + L +++ + ++
Sbjct: 153 RHLIYTAPTGGGKSLVADVLMLKRIIENPTRKAILVLPYVALVQEKLKWLRRIVQDVEKY 212
Query: 601 ----------------------VRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEG 638
+ ++G + +DT +AVCTIEKANSL+N +EE
Sbjct: 213 TVDDEHPDASHHRWRKMQKSIRISGFFGGSKTTASWEDTDIAVCTIEKANSLINTAIEEC 272
Query: 639 RLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAH 698
+ E+G +V+DELHM+ D+NRGYLLEL++TKL +
Sbjct: 273 SIGELGAVVLDELHMLDDENRGYLLELMVTKLLLLQQD---------------------- 310
Query: 699 GLQIVGMSATMP--NVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY------------ 744
+QI+GMSAT+ N +ADW+ A + + +RPVP++EY+ NAIY
Sbjct: 311 -IQIIGMSATISVKNTELLADWINARYFVSTYRPVPVDEYLIYDNAIYPAATSRQLFQTI 369
Query: 745 -----------SKKMDVVRTILTAANLGGKDP--DHIVELCDEVVQEGHSVLIFCSSRKG 791
S+ + RTI +A +P + +V + + V G+ L+FC SR
Sbjct: 370 SKLTATGGPFLSEAVPPQRTIKPSAFRELSNPMSNAMVAMAIDTVTAGYGALVFCGSRVA 429
Query: 792 CESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHA 851
C+ A +S+ + + +D+ + LR P+GLDP LE+TL GV +H+A
Sbjct: 430 CQVHAALISEAMPDPGTLGAEDLGKRLDLLAE---LRSLPSGLDPALEKTLIKGVGFHNA 486
Query: 852 GLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMA 911
G+T EERE + Y +G+++VL AT +LAAGVNLPARRVI R+GR+ + RQM
Sbjct: 487 GMTTEEREAIAQAYDQGVLKVLVATCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMC 546
Query: 912 GRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGI 971
GRAGR G D GE+ LI +++ + LL P + SCL+ +K G+ A+LE +A G+
Sbjct: 547 GRAGRKGKDEAGETYLIVGKSDLQAVCDLLEADMPAIESCLAPEKRGLKRALLEAIATGL 606
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAA 1031
V I YV+CTLL T + +L+ L K ++ NED Y T LG+A
Sbjct: 607 VSGVAAIKEYVKCTLLYRTVDKKLSYSIMDSALQELAEEKLIQLNEDES-YVATQLGQAV 665
Query: 1032 FGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPIN--VEVEPDWELYYERFLELS 1089
S+ P++ L + ++L RA + FV+ D+H+ Y+ TP+ + + DW + + L
Sbjct: 666 VASAFAPDDGLFMYEELKRALQAFVMDGDMHVFYMFTPLQAAAQTQIDWPTFRDL---LD 722
Query: 1090 ALDQS---VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSD 1146
LD S VGV+ ++ M + L++ T
Sbjct: 723 TLDDSGIRALQFVGVNPGFVNSMVQSG-----ASLKEDTP------------------EQ 759
Query: 1147 AQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL 1206
R+ +R Y A L L E P+ + +K+ RG +Q L + FA+ + FC+R+
Sbjct: 760 VTQARIYRRAYTAFQLRDLSNEVPLPVISSRYKIPRGTIQTLAQQCHGFAAGIVKFCQRM 819
Query: 1207 GW 1208
GW
Sbjct: 820 GW 821
>gi|345494548|ref|XP_003427318.1| PREDICTED: helicase POLQ-like isoform 1 [Nasonia vitripennis]
Length = 975
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 295/867 (34%), Positives = 448/867 (51%), Gaps = 143/867 (16%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ ++ K+ +GI KLY WQ ECL++ + +R+NL+Y TS GK+ VAEILMLR +I
Sbjct: 173 LPDKVKNLIKQHKGIDKLYDWQDECLNMKALNERKNLIYALPTSGGKTLVAEILMLREVI 232
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGG---GSLPKDTSVAVCTI 624
K A+ VLP+V++ EK + L L V Y +G K S+ +CTI
Sbjct: 233 CNKKNAIFVLPFVALVQEKIQSLTPFALALNFLVEEYAAEKGHYPPKKRRKKNSIYICTI 292
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMV-ADQNRGYLLELLLTKLRYAAGEGTSDSSS 683
EKA S+VN ++E GRL+EIGIIVIDELH++ A+ RG LE LLTK+ +
Sbjct: 293 EKAQSIVNCLIELGRLNEIGIIVIDELHLLGANGGRGATLECLLTKVMHV---------- 342
Query: 684 GENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAI 743
NS + IVGMSAT+ N+ ++D+L A LY NFRPV ++EY+K I
Sbjct: 343 --NSN-----------VHIVGMSATIGNLKEISDYLNAELYTQNFRPVAIKEYVKCEGNI 389
Query: 744 Y---SKKMDVV---RTILTAANLGGK----DPDHIVELCDEVVQEGHSVLIFCSSRKGCE 793
+ +++ ++ +TI N K DPD + L +V + S LIFCSS+K CE
Sbjct: 390 WLIDTREENIFTDKKTI--KYNYSQKALQVDPDFLGGLVMDVAPKD-SCLIFCSSKKNCE 446
Query: 794 STARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGL 853
+ A +++ L K S+ VH +D + ++AL + PVL++T+ GVAYHH+GL
Sbjct: 447 NVAVLLTQVLLK-SVEVHKADEKI----KLLNALETETGSICPVLKKTIKFGVAYHHSGL 501
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T EER ++E +R G++ V+ TSTLAAGVNLPARRVIFR P +G +F++ +RY+QM GR
Sbjct: 502 TAEERRLLEEAFRSGILCVICCTSTLAAGVNLPARRVIFRSPYVGTEFLNMSRYKQMIGR 561
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLL----NESCPPLHSCLSEDKNGMTHAILEVVAG 969
AGR GI GES+LIC + +K+ LL ++S LH E G+ + I+ V
Sbjct: 562 AGRAGISEIGESILICTKRDSEKVRELLRSKMDDSLSTLH---IEKDRGVNNLIISSVLL 618
Query: 970 GIVQTAEDIHRYVRCTL------------------------------------------L 987
I T DI + TL L
Sbjct: 619 SIATTRADILNIMSKTLLKVQENRLGISVKEVTDKALTTLLKSGILRVKQKQTKEVFSKL 678
Query: 988 NSTKPFQDVVKSAQDSLRWLCHRK---FLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIV 1044
+ST F + ++ D + ++ ++ T+L PLGRAA S+ + + +
Sbjct: 679 DSTVIFPSQINTSNDDVTTSVKKEKKNYITLVNSTEL-ELCPLGRAAMKGSIDLQSAHTL 737
Query: 1045 LDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVS 1102
+DL +A+ VL LHL+YL TP +V +V+P +YY+ + L V +G++
Sbjct: 738 YEDLKKAQANLVLVDYLHLLYLITPYDVACQVKPVGTVYYDVMMSLPPHQMKVARLLGIN 797
Query: 1103 EPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALIL 1162
E + R+ R GIT N+ R+ +RFYV L+L
Sbjct: 798 EAAVDRL-------------------------RAGITPKNV-----DQRIVQRFYVTLML 827
Query: 1163 SRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLEGLIAKFQNR 1221
+ L + V + ++V RG +Q L A F+S V FC+ L ++ + L++ F +
Sbjct: 828 NELWNRRSIYFVADKYQVNRGTIQNLLSLASSFSSSVVRFCDELDEFWAFKDLLSTFGQK 887
Query: 1222 VSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
+++ +E+ L +PYVK RA+ LYKAG ++ +IA+A +++ I
Sbjct: 888 LTYCCASELEPLMDLPYVKIGRAKQLYKAGFKSLQSIAKAKPEDMMDK-------IEHLP 940
Query: 1282 RRVQLGVAKKIKNGARKIVLEKAEEAR 1308
RR V +I + A+ ++LEK E R
Sbjct: 941 RR----VVSQIISSAKLLLLEKVENLR 963
>gi|298712112|emb|CBJ32993.1| ATP binding / ATP-dependent helicase/ DNA binding / DNA-directed DNA
polymerase/ helicase/ nucleic a [Ectocarpus siliculosus]
Length = 1533
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 271/790 (34%), Positives = 412/790 (52%), Gaps = 126/790 (15%)
Query: 569 TGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGG-GSLPKDTSVAVCTIEKA 627
+G MALLV+PYV++ EK ++L + PL ++++Y+G +GG GS + +VA+CT+EKA
Sbjct: 758 SGTMALLVVPYVALALEKRDYLRDVWSPLQLNIQAYHGGEGGDGSDMEGVNVAICTMEKA 817
Query: 628 NSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENS 687
NS+VNR+ EE RL+ + +V+DE+H++ D+ RG+LLEL+LTK R
Sbjct: 818 NSIVNRLAEEKRLAALSAVVVDEMHLIGDRARGFLLELMLTKQRLLC------------- 864
Query: 688 GTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKK 747
+ +Q++ +SAT+PN+ +A WL A+LY T +RPV L ++ G A+Y
Sbjct: 865 ---------PNNVQLICLSATLPNIECLAKWLDASLYRTAYRPVELRHFVCQGRAVYRPT 915
Query: 748 M-----------------------DVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLI 784
D+ R T+ + DPD +V+L + + SVL+
Sbjct: 916 RIRGTGGGAAGGDDEGTLEKVVGGDIKRVGGTSPS---ADPDGVVDLVKDALARDMSVLV 972
Query: 785 FCSSRKGCESTARHVSKFLKKFSINVHSSDSE----------FIDITSAIDA---LRRCP 831
FCS++K C+ TA L K ++ + +E T+A D LR+ P
Sbjct: 973 FCSTKKWCQQTA----TLLAKEVLSDRNRAAEGGKATERRRGASSPTTADDVREKLRQTP 1028
Query: 832 AGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVI 891
GLD L + +G+A+HH+GL VEER ++E +R+G +RVL ATSTLAAGVNLPA RVI
Sbjct: 1029 VGLDADLSYLVGTGIAFHHSGLVVEERSILEEAFRQGSIRVLVATSTLAAGVNLPAHRVI 1088
Query: 892 FRQPRIGRDFIDGTRYRQMAGRAGRT-------------GIDT-KGESMLICKPEEVKKI 937
R P +G +D TRY QMAGR+GR G+DT +GES LI P+ VK
Sbjct: 1089 IRSPSVGIGLLDSTRYHQMAGRSGRAGVSRGEEGGKAVQGVDTARGESFLIL-PKNVKFT 1147
Query: 938 MG----LLNESCPPLHSCLSE-DKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKP 992
+ L++ P L S L + + G+ A+LEV+ V + E R+ TLL + P
Sbjct: 1148 LSDASKLISAPLPKLESALRDAEGGGLERALLEVIVSMTVTSREGARRFSCKTLLAAQIP 1207
Query: 993 FQDVVKSAQDSLRWLCHRKFL-----EWNEDTKLYSTTP--LGRAAFGSSLCPEESLIVL 1045
+V+K+ ++ +L F+ + E Y P LGRA F S L P ++ V
Sbjct: 1208 EDEVLKACDSAMAYLLKHNFVVQRGGDSVEGCADYDVAPTQLGRATFFSGLSPSAAVDVF 1267
Query: 1046 DDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALD--QSVGNQVGVSE 1103
+ L +A + F +ASDLH + L TP++ +EP+W + E +L S D + VG +GV
Sbjct: 1268 ESLDKACQNFAVASDLHALVLVTPLD-GIEPNWGRFREEYLACSTDDPVRVVGELIGVEL 1326
Query: 1104 PYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSN-NMLSDAQTLRVCKRFYVALIL 1162
L+ A +T +G+ Y + SN + + D Q R R Y A++L
Sbjct: 1327 GVLVGAA------------GNTAPKYGQRSYEVSRGSNHHRMVDLQPYR---RLYGAMLL 1371
Query: 1163 SRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRV 1222
+ V+E PV + + RG +QALQ+ A F MV FC L W++L ++ FQ+R+
Sbjct: 1372 QQAVEEVPVRNMAGRLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRL 1431
Query: 1223 SFGVRAEIVELTTI-----PYVKGSRARALYKAGLRTPLAIAEASISEIVKAL-----FE 1272
+ + E++ L + P+ RARAL KAG +PL +A A S + L F
Sbjct: 1432 GYSAKPELLPLVRLSRDLPPF----RARALLKAGYPSPLELATADASRVADVLLRCAPFR 1487
Query: 1273 SSSWIAEAQR 1282
S+ W +R
Sbjct: 1488 SAGWDESVER 1497
>gi|255071395|ref|XP_002507779.1| hypothetical protein MICPUN_113588 [Micromonas sp. RCC299]
gi|226523054|gb|ACO69037.1| hypothetical protein MICPUN_113588 [Micromonas sp. RCC299]
Length = 1974
Score = 409 bits (1051), Expect = e-110, Method: Compositional matrix adjust.
Identities = 325/983 (33%), Positives = 468/983 (47%), Gaps = 214/983 (21%)
Query: 492 TPSSSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCAST 550
TP + + D L L + L + + ++ IS+LYPWQ ECL + GV+ RNLVYCA T
Sbjct: 188 TPPAVTVELDSLALPTAL---VDYLRAEKKISRLYPWQAECLAMPGVMAHTRNLVYCAPT 244
Query: 551 SAGKSFVAEILMLRRLISTG-----KMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYY 605
S GKS V+++L++RRLI+ G MAL+VLP+VS+C E++ L +L+PLG VRS +
Sbjct: 245 SGGKSLVSDLLVVRRLIAGGCDGGAAMALMVLPFVSLCQERSTELTRMLKPLGIEVRSCF 304
Query: 606 GNQGGGSLPKDTS--VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLL 663
G Q G P+ + + V T EKAN LV R++ E R+ E+ +V+DELHMV D +RG +
Sbjct: 305 GGQRGALPPRGGAGGLIVATPEKANDLVTRLVAEDRIHELACVVVDELHMVQDVSRGSTV 364
Query: 664 ELLLTKLRYAAGEGTSD---SSSGENSGT-------SSGK--------------ADPAHG 699
EL+LTKL +AA E +SD +SS E SG+ +GK A P G
Sbjct: 365 ELMLTKLMHAAAESSSDGVDASSYEYSGSHLEVGARGAGKGEDDGKPRENDIYLASPLSG 424
Query: 700 --------------LQIVGMSATMPNVAAVADWL-QAALYETNFRPVPLEEYIKVGNAIY 744
LQ++GMSAT+PN+ A+A WL AAL+ET+FRPVPL ++ VG Y
Sbjct: 425 ASSERDPTGSAPSPLQVIGMSATLPNLDALARWLGDAALFETDFRPVPLRSHVVVGARAY 484
Query: 745 -------------------------------SKKMDVVRTILTAANLGGKDPDHIVELCD 773
+ V T T A+ G + D + L
Sbjct: 485 PVPEREAIEFLDAHDDPLDAGGARDLCINPSALNHSVPSTSSTPADAGCTELDAVEALAS 544
Query: 774 EVVQEGHS-VLIFCSSRKGCESTARHVSKFLKKFSIN----------------------- 809
E V+ G V++FC++R CE AR +S+ L+ +
Sbjct: 545 ETVRRGGGGVIVFCAARFQCELVARALSQRLRVPGADTETNAPLASLVQDIRRVTGDEPT 604
Query: 810 VHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGL 869
VH SDS ++ ++ ++ L + GVA+HHAGL E R +VE +R+
Sbjct: 605 VHRSDSSMVNRGESMQ--------MNKTLADCAAVGVAWHHAGLHPEARTLVERGFRENS 656
Query: 870 VRVLTATSTLAAGVNLPARRVI------FRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKG 923
++V+ T+T+A GVNLPA RV+ +R+ G I +QM GRAGR G T G
Sbjct: 657 IQVICCTTTMATGVNLPASRVVIHGAYQYRKGNKGHALIGSRDLQQMVGRAGRAGFATLG 716
Query: 924 ESMLIC-KPEEV--KKIM-GLLNESCPPLHSCLSED-----------------KNGMTHA 962
E+ +I KP E+ + IM G N + + ++ + K GM
Sbjct: 717 EAFVIAPKPNEIDWRSIMVGPSNGAQTRDRAAVARELGRRLVSSGDALSSRIAKEGMRRV 776
Query: 963 ILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQ-DVVKSAQDSLRWLCHRKFLEWNEDTKL 1021
+L+ VA G+ T +I RYV TLL + FQ V A +L WL H F W++
Sbjct: 777 MLDAVACGLANTPREIRRYVARTLLAALNDFQDVVAADATAALAWLAHGGFTVWDQHAFR 836
Query: 1022 YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEP----- 1076
+ T LGRAA + L P+ ++ V++D+ AR +L SDLHL++L VE EP
Sbjct: 837 WEPTALGRAAAAAHLTPDAAVRVVNDVKLARRRLILESDLHLLFLC----VEPEPPVCVG 892
Query: 1077 ---------------------------DWELYYERFLELSALDQSVGNQVGVSEPYLMRM 1109
D + + + LS + V N VG+ Y
Sbjct: 893 RDATQGGPNETNKGATNRPRTPETCSLDEVSFIKIYESLSEHESRVANAVGIKADY---- 948
Query: 1110 AHGAPMRISSKLRDSTKGL---HGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLV 1166
+ +LR K + HG RVC RF AL L LV
Sbjct: 949 -------VEGRLRLGRKDVTPEHGNQR-----------------RVCLRFLHALALKDLV 984
Query: 1167 QETPVLEVCETFKV-ARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFG 1225
E + +F + + +LQE+AGR+A V+ C +GW D+E L+A+ Q+R++ G
Sbjct: 985 SEVDHATIVASFGLKTSARLLSLQESAGRYAGQVASVCGPMGWGDMEVLVARLQDRITAG 1044
Query: 1226 VRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQ 1285
R EI+ LT IP + SRAR LY G+RTP AIA S ++VK L + R
Sbjct: 1045 AREEILCLTHIPQIGASRARTLYNHGVRTPEAIAALSREDLVKILRSRGPF-----ERAP 1099
Query: 1286 LGVAKKIKNGARKIVLEKAEEAR 1308
A I GAR++ E+ R
Sbjct: 1100 GRAADAILRGARQLCEEQRRATR 1122
Score = 223 bits (569), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 247/514 (48%), Gaps = 88/514 (17%)
Query: 1730 ELIEALLNIEIPLVNVLADMELWGIGVDMEG-CLQARNLLQKKLRYLEKKAYTL------ 1782
+L + L + E+ LV LA ME G+ D C Q R ++LR +E++A L
Sbjct: 1475 KLGDVLRDAEMRLVPALAQMEATGVAFDPSVLCRQMRQA-NRRLREIEREADALVSKQVP 1533
Query: 1783 -AGMKFSLYTAADIANVLYGHLKLPIPEGH----NKGKQHPSTDKHCLDLLRHEHPIVPV 1837
A FSL ++AD+A VL+ +LKLP P G++ + L L+ + + +
Sbjct: 1534 GAEPAFSLASSADVARVLFENLKLPPPPCAVVQCGNGRRRLRANAEVLAALKDQSDLPAL 1593
Query: 1838 IKEHRTLAK-------LLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
+ EHRTL++ ++ LG S + L G QT+T TGRL+MEEPN
Sbjct: 1594 VLEHRTLSRCVAMADEMVELALGGARRDEGNSSRGKITRLRGAIHQTNTETGRLAMEEPN 1653
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEV----------------------DHCKINARDFFIPS 1928
LQ V F+M+ D Y G + ++ R+ F+ +
Sbjct: 1654 LQTVPKPRTFRMA--DAYDGRPGIIAPEGSAKAHKTREPSPGTEVGSEETLSVRNAFV-A 1710
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSK-------PHGDVFTMIAARWTGRSED 1981
+LL+ADY Q+ELR+MAH S D L+ + P D F +A+RW G
Sbjct: 1711 PPGAVLLSADYRQLELRVMAHMSGDEGLVRAFNHEGAPPHHPDADPFRFLASRWRGVEVG 1770
Query: 1982 SVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH--VA 2039
V +R K+L YG+LYG GP ++++ + +EA+ +I++FK+S PGV W +
Sbjct: 1771 KVSDADRAVAKQLAYGVLYGSGPARFAQEMGVTESEARVQIEAFKASVPGVERWRKKLIE 1830
Query: 2040 VSSCHQKGYVESLKGRKRFLSKI--------------KFGNNKEKSKAQRQAVNSICQGS 2085
+S VE++ GR+R LS + K ++S +R+AVN+ CQGS
Sbjct: 1831 TASRASPPSVETICGRRRILSSLAPDAALTATGCEDAKRRFRLDRSADERRAVNTACQGS 1890
Query: 2086 AADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEA 2145
AAD++K AMI + + D SLA +LQ+HDEL+ EVD S + EA
Sbjct: 1891 AADVVKRAMIAVFDEL-------DPSLATP----------VLQIHDELLFEVDASRVVEA 1933
Query: 2146 VSLVQKCMESAA---LLLVPLLVKIQVGSTWGSL 2176
V+ ME A VPL VK+ G+ WG L
Sbjct: 1934 ARAVRAIMERAGDEFGFTVPLPVKVSAGANWGDL 1967
>gi|413916517|gb|AFW56449.1| hypothetical protein ZEAMMB73_871172 [Zea mays]
Length = 733
Score = 409 bits (1051), Expect = e-110, Method: Compositional matrix adjust.
Identities = 247/472 (52%), Positives = 306/472 (64%), Gaps = 27/472 (5%)
Query: 273 ETPKSTCGNSIFSPGEAFWNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNEINNSYNLR 332
ET KS NS+ SPGE FWN AIE+ADG A D + A+ KS + +
Sbjct: 188 ETLKSVSRNSLTSPGEEFWNAAIELADGISAQADKVRGRPEFDAAEDKSSCAVAAFFKTL 247
Query: 333 NKNYNKSKEMLNE-GDSKVQHI-KAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFEDK-- 388
++ + N G + HI K ++ + + + SPLP+K LDF ED
Sbjct: 248 PRSGRDELDCQNTVGSNDTHHIEKLSNKVESLAVNCQHIIS--SPLPVKQLDFFHEDDIK 305
Query: 389 ------NLKGTKPGCGA-ADTS--------EAMMFRDGVVSEKGSVTHKSCQKIKFKCHH 433
KG+ C A AD E D V K S + +C
Sbjct: 306 VSGSKFETKGSYETCNAQADRVPLKGSGRLEKENLMDPVDVLKRSAINLHTDSAAMRCQG 365
Query: 434 DNTSRTEG-ISDVQE--KDSVLIVHE--RKLDISSQGIDSITSDSPTNVIKKPVGNEKSD 488
S TEG + QE +DS LI + + ++ + + +++ T + K +
Sbjct: 366 VFKSTTEGKVHPTQEAERDSNLIRRDLNQPTHNENKSLAAYSNNRKTWIDSKSKVASQEV 425
Query: 489 EAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCA 548
EA TP+SS LKD +SSWLP ++C+IY K+GIS+LYPWQVECL V+GVL +RNLVYCA
Sbjct: 426 EASTPTSSIPLKDHSKISSWLPPDLCAIYMKKGISELYPWQVECLLVEGVLGKRNLVYCA 485
Query: 549 STSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQ 608
STSAGKSFVAE+LMLR+++STG MA+LVLPYVSICAEKAEHLE LLEPLGRHVRS+YGNQ
Sbjct: 486 STSAGKSFVAEVLMLRQILSTGNMAILVLPYVSICAEKAEHLEQLLEPLGRHVRSFYGNQ 545
Query: 609 GGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLT 668
GGGSLPKDT+VAVCTIEKANSLVN++LE+GRLSE+G+IVIDELHMV DQ+RGYLLEL+LT
Sbjct: 546 GGGSLPKDTAVAVCTIEKANSLVNKLLEDGRLSELGVIVIDELHMVGDQHRGYLLELMLT 605
Query: 669 KLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQ 720
KLRYAAGEGT S SGE S +SSGK +HGLQI+GMSATMPN+AAVADWLQ
Sbjct: 606 KLRYAAGEGTLQSCSGEVSSSSSGKI-ASHGLQIIGMSATMPNIAAVADWLQ 656
Score = 41.2 bits (95), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 1 MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSP-SAKGTLDNYLKNS 56
MASGS R +IDQF+ +KKR+ PS + G + + T SP AKG+L+ YL S
Sbjct: 1 MASGSSRPQIDQFFPAKKRR---PSSRKGESPRPG--TQHESPGGAKGSLEGYLVRS 52
>gi|301620543|ref|XP_002939628.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Xenopus
(Silurana) tropicalis]
Length = 1005
Score = 409 bits (1050), Expect = e-110, Method: Compositional matrix adjust.
Identities = 278/840 (33%), Positives = 444/840 (52%), Gaps = 111/840 (13%)
Query: 503 LDLSSW--LPSEICS-IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
LDL + LPS + IY+ R I KLY WQ CL + + +R+NL+Y TS GK+ VAE
Sbjct: 223 LDLGPFYGLPSRVRDLIYQFRRIKKLYDWQHTCLTLQSIKERKNLIYSLPTSGGKTLVAE 282
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---D 616
IL+L+ L+ K L++LPYV+I EK L L V Y G++G K
Sbjct: 283 ILVLQELLCRQKDVLMILPYVAIVQEKVRGLASFGVELDFLVEEYAGSRGRFPPIKRRTK 342
Query: 617 TSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGE 676
S+ + TIEK +SL+N ++E GR++++G+IV+DELHM+ + +RG +LE+ L+K+ Y
Sbjct: 343 KSLYIATIEKGHSLINSLIETGRINDLGLIVVDELHMLGEGSRGAILEMTLSKILY---- 398
Query: 677 GTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEY 736
TS S +QI+GMSAT+ NVA + ++L+A Y NFRPV L+E+
Sbjct: 399 -TSTS------------------IQIIGMSATLNNVAELQNFLKAEYYTNNFRPVELKEF 439
Query: 737 IKVGNAIYSKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSS 788
+KV + IY + + + L K DPDH+V L EV+ +S L+FC +
Sbjct: 440 VKVRDCIYEVDSNAENNLTFSRLLNYKYSNNMMKIDPDHVVALVTEVI-PANSCLVFCPT 498
Query: 789 RKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVA 847
+K CE+ A + K+L K + ++ + + I L+ G L VL+ T+P G+A
Sbjct: 499 KKNCENVAEMICKYLNKLYVEHREAEKK-----NLIADLKNIGNGVLCSVLKRTIPFGIA 553
Query: 848 YHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY 907
YHH+GLT +ER+++E Y G++ +L TSTLAAGVNLPARRVI R P + DF+ +Y
Sbjct: 554 YHHSGLTSDERKLIEEAYSAGVLCLLACTSTLAAGVNLPARRVILRAPYVANDFLKRAQY 613
Query: 908 RQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAI 963
+QM GRAGR GID+ GES+LI + ++ + + L+++ P+ +C S +
Sbjct: 614 KQMVGRAGRAGIDSAGESILIIQEKDKELVQELISK---PMENCYSNLMHNSGKDFQSLL 670
Query: 964 LEVVAGGIVQTAEDIHRYVRCTL-------LNSTKPFQDVVKSAQDSLR---WLCHRKFL 1013
L ++ I +TAE+I+ +V CTL L K DV K + + L +C +
Sbjct: 671 LSLIGLKITKTAEEIYSFVSCTLFSVQQSVLCKAKNLLDVTKESLECLVDKGLICGKTCS 730
Query: 1014 EWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV- 1072
E + ++ + LG A + + ++ DL+R EG VL S LHL+YL P ++
Sbjct: 731 ETEQ--YIFQVSKLGHATYKGCIDLACYDLLYSDLNRGLEGLVLESFLHLLYLVIPYDLV 788
Query: 1073 -EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGK 1131
+ PDW +Y+ ++ LS ++Q V VG+ E +L R A G ++ S
Sbjct: 789 GKFNPDWMIYFRQYNSLSPVEQKVAASVGIPESFLARKASGQTVKTS------------- 835
Query: 1132 LEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARG--MVQALQ 1189
+NNM V R Y++ IL L++ET + + VA+ ++ +L+
Sbjct: 836 --------ANNM--------VVNRLYLSFILYTLLKETNLHSHNANYYVAKSIFIMYSLE 879
Query: 1190 E----NAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1245
+++ + +F E ++ + L+ + ++++ V++E++ L + V +RA+
Sbjct: 880 GCVLIQIWKYSCVNFIFQELDEFWAYKSLLQELTKKLTYCVKSELIPLMEVAGVMEARAK 939
Query: 1246 ALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
LY AG + +A A +VK + E R Q AK+I A+ +V EKAE
Sbjct: 940 QLYNAGYTSLAHLANADPEVMVKKI--------EHLSRHQ---AKQIVFSAKMLVNEKAE 988
>gi|315044041|ref|XP_003171396.1| DNA polymerase theta [Arthroderma gypseum CBS 118893]
gi|311343739|gb|EFR02942.1| DNA polymerase theta [Arthroderma gypseum CBS 118893]
Length = 916
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 258/822 (31%), Positives = 415/822 (50%), Gaps = 126/822 (15%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+ + + G++ +YPWQ CL G L +NLVY A T GKS VA++LML+R++
Sbjct: 114 LPAALVKNFASLGVNAIYPWQASCLLGRGHLSGEKNLVYSAPTGGGKSLVADVLMLKRIL 173
Query: 568 ST-GKMALLVLPYVSICAEKAEHLEVLLEPLGR--------------------------- 599
+ K A+LVLPYV++ EK + L ++E + R
Sbjct: 174 TCPDKKAILVLPYVALVQEKLKWLRRVVEGIPRCTHDDDVDVENSAGGDAHPSRFKSEEN 233
Query: 600 --HVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQ 657
V ++G + DT +A ANSLVN +E+ + ++G+IV+DELHM+ D+
Sbjct: 234 FIRVTGFFGGSKTRTTWSDTDIA------ANSLVNTAIEDCTIDKLGVIVLDELHMLDDE 287
Query: 658 NRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVAD 717
+RGYL+E+++TKL + +QI+GMSAT+ N +A
Sbjct: 288 HRGYLIEIMVTKLLLLQQD-----------------------IQIIGMSATLSNTEVLAK 324
Query: 718 WLQAALYETNFRPVPLEEYIKVGNAIYS--------KKM-------------DVVRTILT 756
WL A Y + +RP+P+EE++ + IY +KM R I
Sbjct: 325 WLNANYYISRYRPIPVEEFLVFEDYIYPVPATKGLLRKMIKPNTSNSHNIPASACRVIRK 384
Query: 757 AA--NLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSD 814
+ L P+ +V L E G+ L+FC SR+ C++ A + + + D
Sbjct: 385 SEFRELAFPIPNAMVALACETAAAGYGALVFCGSRQACQTNAVLIGDAMPD------TLD 438
Query: 815 SEFIDI-TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVL 873
++ I+ + +L+ P GLD +T+P GVA+HHAGLT EER ++ + G+++VL
Sbjct: 439 ADIIEKRLDLVASLQSLPCGLDTYFAKTIPRGVAFHHAGLTTEERVLIAEGFDSGILKVL 498
Query: 874 TATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEE 933
AT +LAAG+NLPARRVI R+GR+ + RQM GRAGR G D GE+ L C ++
Sbjct: 499 VATCSLAAGINLPARRVILCGARMGRELVGPAMLRQMRGRAGRKGKDEVGETYLCCTSKD 558
Query: 934 VKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPF 993
+ ++GLL P + S L+ + G+ A+LE +A +V + I+ Y+R +LL
Sbjct: 559 WEDVVGLLEAELPAIASGLAPGRAGIKRALLEAIATKLVSGRDAINDYIRSSLLFHNDEA 618
Query: 994 QD-VVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAR 1052
QD ++ Q +L+ L + ++ + D + + T LG A S+ P++ L + +L RA
Sbjct: 619 QDTLLDMVQSTLQELLDAELVKSSSD-ETFEPTQLGLAIVASAFSPDDGLFIYGELKRAL 677
Query: 1053 EGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRM 1109
+ FV+ ++H+ Y+ +P+ V E DW + + E+ LD S VGV + +
Sbjct: 678 QAFVMDGEMHIFYMFSPLQVSAEIDWMAFRD---EVHGLDDSGLRTIQLVGVDPGLVNSI 734
Query: 1110 AHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQET 1169
A G +S K D LRV R Y A L L E
Sbjct: 735 AMG---HVSIK-------------------------DPALLRVYNRVYTAFQLRDLSNEI 766
Query: 1170 PVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAE 1229
PV + + + +ARG VQ L +N FA+ ++ FC+R+GW L ++ ++R+ G RA+
Sbjct: 767 PVSSIAKKYNIARGAVQTLAQNCHGFAAGMAKFCQRMGWDMLAVVLDHMRDRLQAGARAD 826
Query: 1230 IVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
++E+ + YVK AR L++ G +T ++AEA+ +++V L
Sbjct: 827 LLEMAQVTYVKSRTARLLWENGFKTLRSLAEAAPTDLVPVLM 868
>gi|270002335|gb|EEZ98782.1| hypothetical protein TcasGA2_TC001346 [Tribolium castaneum]
Length = 1079
Score = 404 bits (1039), Expect = e-109, Method: Compositional matrix adjust.
Identities = 293/861 (34%), Positives = 430/861 (49%), Gaps = 142/861 (16%)
Query: 512 EICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGK 571
E+ +YK GI +LY WQ ECL++ + + RNL+Y TS GK+ VAEILMLR ++ K
Sbjct: 274 ELIKMYK--GIDELYDWQDECLNLPAIKEHRNLIYALPTSGGKTLVAEILMLREIMCRKK 331
Query: 572 MALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEK 626
A+ +LPYV+I EK L L V Y ++G + P + S+ + TIEK
Sbjct: 332 NAIFILPYVAIVQEKVWALSPFAVALDFLVEEYAASKG--TYPPRKRRRKNSIYIATIEK 389
Query: 627 ANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGEN 686
A L+N ++E R++EIG+IV+DELH+V + RG LE LLTK+ Y
Sbjct: 390 ALGLLNSLIETDRINEIGLIVVDELHLVGEPGRGSTLEALLTKIMYTNA----------- 438
Query: 687 SGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAI--- 743
+Q+VGMSAT+ NV + +L A +Y NFRPV L EY+K G +
Sbjct: 439 ------------NIQVVGMSATIGNVNDLCQFLNADIYSQNFRPVELVEYVKCGPEVAKI 486
Query: 744 -YSKK---MDVVRTI---LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
YS K + VVR I ++ + DPD + L EVV EG S LIFC+S+K CE+ A
Sbjct: 487 NYSPKDELLTVVRKIDHKYPSSGMNSLDPDKLGALVMEVVPEG-SCLIFCASKKNCENVA 545
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVE 856
+ K + K ++ + E + +L+ L + ++ G+AYHH+GLT E
Sbjct: 546 SLLCKVVNKSLLDYKKEEKEQVK-----HSLKDEGGSLCKIFNVSIQLGIAYHHSGLTNE 600
Query: 857 EREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGR 916
ER V+E +R G++ V+ TSTLAAGVNLPA+RVI RQP +GR+FI ++Y+QM GRAGR
Sbjct: 601 ERRVIEEAFRAGVISVICCTSTLAAGVNLPAKRVILRQPYVGREFISLSKYKQMVGRAGR 660
Query: 917 TGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGIV 972
G+ GES+LIC P E+ K+ LL P+ LS + G+ H +L ++ G+
Sbjct: 661 AGLGETGESILICNPPELPKVKKLL---LSPMDEALSGMHQNEGKGLRHLLLSCISLGVA 717
Query: 973 QTAEDIHRYVRCTLLN-------------STKPFQDVVK--SAQDS-------------- 1003
T + + TLL+ + K D+ K + Q++
Sbjct: 718 NTRAQLQEVAKKTLLHIQSERLEINLKKLTDKAISDLFKLGALQEADLSKKENTIDCDVT 777
Query: 1004 -------------LRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSR 1050
+ ++ + DTKL + LG AA + + + DDL +
Sbjct: 778 VKMETSFSSTDSNSSNVSRKRKIVLKNDTKLV-ISKLGCAAIKGNFELARAHQLYDDLHQ 836
Query: 1051 AREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMR 1108
A++ VL LHL++L TP ++ +++PD YY F L + +G+ + +R
Sbjct: 837 AQKSLVLLDCLHLLFLVTPYDLAEQIKPDRNDYYNIFRTLGRNELQTARILGIDDAVALR 896
Query: 1109 MAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQE 1168
M P+R + RV RFY+ L+L L E
Sbjct: 897 MLANQPIRNVPE------------------------------RVLNRFYLTLMLYDLWNE 926
Query: 1169 TPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVR 1227
TPV EV E F+V RG+VQ L A FAS V FCE L ++ L+ R+S
Sbjct: 927 TPVFEVSEKFQVNRGIVQHLMTGAATFASNVVHFCEGLEEFWTFAHLLNGMSQRLSHCCV 986
Query: 1228 AEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLG 1287
E++ L +P VK SRAR LY AG ++ +IA A+ +L ES ++ RR
Sbjct: 987 KELLPLMQLPAVKQSRARQLYNAGYKSIRSIAAAN----ADSLVESIEYLP---RR---- 1035
Query: 1288 VAKKIKNGARKIVLEKAEEAR 1308
VAK++ A+ ++LEK E R
Sbjct: 1036 VAKQLIAAAKMLMLEKVENLR 1056
>gi|164424270|ref|XP_958186.2| hypothetical protein NCU07411 [Neurospora crassa OR74A]
gi|157070445|gb|EAA28950.2| hypothetical protein NCU07411 [Neurospora crassa OR74A]
Length = 907
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 284/897 (31%), Positives = 433/897 (48%), Gaps = 147/897 (16%)
Query: 471 SDSPTNVIKKPVGNEKSDEAGTPSSSGMLKD-CLDLSS---WLPSEICSIYKKRGISKLY 526
+D K + +E S PS+ D L LS LP ++ + + GI +Y
Sbjct: 18 ADPVATAAKGGIPSEYSQRRALPSTPTSTSDPLLSLSHPVYKLPKQLVANFASLGIKTIY 77
Query: 527 PWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI---STGKMALLVLPYVSI 582
PWQ +CL G+L +NLVY A T GKS VA++LML+R++ + A+LVLPYV++
Sbjct: 78 PWQKQCLLGPGLLSGDKNLVYSAPTGGGKSLVADLLMLKRVLDDPAGEAKAILVLPYVAL 137
Query: 583 CAEKAEHLEVLLEPLGR---------------------------HVRSYYGNQGGGSLPK 615
EK L ++ + R V ++G +
Sbjct: 138 VQEKVRWLRNVVSGISRSGDLGQKQPHLEGKQQLWARRPDKDTIRVVGFFGGSKMRATWA 197
Query: 616 DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAG 675
D VAVCT+EKANSL+N + + +S++ +V+DE HM+ D RGYLLEL+ TKL
Sbjct: 198 DFDVAVCTMEKANSLINAAITDCSISKLRAVVLDECHMIDDGYRGYLLELMTTKLLCLDQ 257
Query: 676 EGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
+ +QI+ MSAT+ N+ + DWL YET++RPVP+EE
Sbjct: 258 Q-----------------------VQIIAMSATLTNIRLLKDWLGGHSYETHYRPVPIEE 294
Query: 736 YIKVGNAIY-----------SKKMDV---------------------------VRTILTA 757
++ IY + ++D +R I +
Sbjct: 295 HLVYDGKIYPATTTASLLKTASQLDTRNATTTTTTTTTTTQGPPPSTTSSLQHIRFIHPS 354
Query: 758 ANLGGKDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDS 815
+ KDP + +V L +E + G+ VL+F SSR GCES A +S+ L F
Sbjct: 355 LHREFKDPVLNAVVALANETARAGYGVLVFSSSRAGCESDAVLISRVLPSFQEADPLIRE 414
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
+D+ ++ LR GLDP LE+T+P GVA+HHAGLT EERE++ Y G ++V A
Sbjct: 415 RRLDL---LNDLRSSSTGLDPKLEQTIPCGVAFHHAGLTTEERELIANAYDAGTLKVCVA 471
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVK 935
T++LAAG+NLPARRVI R+G D + RQM GRAGR G D GE+ L C+ +++
Sbjct: 472 TASLAAGINLPARRVILHGARMGIDLVGPAMLRQMRGRAGRKGKDEVGETYLCCRRNDLE 531
Query: 936 KIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLL-------- 987
++ L++ P + SCL D+ + A+LEV+A + + E + YV T+L
Sbjct: 532 AVVDLMHADLPQITSCLVSDERRIRRALLEVIAIKLATSREALDEYVGRTMLACEQRLAE 591
Query: 988 NSTKPFQDVVKS-AQDSLRWLCHRKFLEWNEDTKL----YSTTPLGRAAFGSSLCPEESL 1042
T ++D ++ + L L F+ D + YSTT LG A SSL PE+ +
Sbjct: 592 KETDEWEDQIRGYIEIGLEKLKEMGFITVTVDERFETASYSTTKLGGAIVASSLDPEDGV 651
Query: 1043 IVLDDLSRAREGFVLASDLHLVYLSTPINV---EVEPDWELYYERFLELSALDQS---VG 1096
+ +L RA +GFV+ ++H++Y TP++ +W++++ E+ LD+S V
Sbjct: 652 FIHKELERALKGFVMDGEMHVLYNFTPVSGLGNGTSVNWKVFWN---EMEKLDESGLRVM 708
Query: 1097 NQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRF 1156
+ +G+ L RM G GI + T R RF
Sbjct: 709 SFLGLKPVVLNRMLQG------------------------GILKETTDEEKDTARRYHRF 744
Query: 1157 YVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIA 1216
Y+AL L L E P+ V + + V RG VQ L + FA+ + FCE +GW + +
Sbjct: 745 YLALQLRDLCNEVPIHRVAQKYDVPRGTVQTLAQTCQGFAAGMIKFCEAMGWGAMAAALD 804
Query: 1217 KFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFES 1273
F +R+ G RA+++ L+ I +VK AR + G +T IA A E+V L ++
Sbjct: 805 HFADRLKAGARADLLSLSKITFVKSRTARVFWDNGFKTVAVIANADPKELVPVLMQA 861
>gi|383859979|ref|XP_003705469.1| PREDICTED: helicase POLQ-like [Megachile rotundata]
Length = 1014
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 284/856 (33%), Positives = 430/856 (50%), Gaps = 131/856 (15%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS + ++ + RGI LY WQ ECL +D V R+NL+Y TS GK+ VAEILML+ +I
Sbjct: 210 LPSAVKQLFSQIRGIDTLYEWQDECLSLDAVKNRKNLIYALPTSGGKTLVAEILMLKEVI 269
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGG---GSLPKDTSVAVCTI 624
+ A+ +LP+V+I EK + + L + Y ++G K S+ +CTI
Sbjct: 270 CNKQNAIFILPFVAIVQEKVQAMAPFALELDFLIEEYAASKGAYPPKKRRKKNSIYMCTI 329
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQN-RGYLLELLLTKLRYAAGEGTSDSSS 683
EKA L+N ++EE R EIG+IV+DELH++ + RG LE++LTK Y
Sbjct: 330 EKALGLINSLIEEKRFKEIGLIVVDELHLIGEGGGRGATLEVILTKALYVN--------- 380
Query: 684 GENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAI 743
+ I+GMSAT+ N+ +A++L+A LY NFRPV ++EY+K + I
Sbjct: 381 --------------ETVHIIGMSATIGNLNEIAEFLKADLYTGNFRPVEIKEYVKCDDCI 426
Query: 744 YSKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCEST 795
+ + + + + DPD I L +VV + S LIFCSSRK CE+
Sbjct: 427 WLLDLKSEELLTDMKKINYRYSSDAAIIDPDRIGGLVMDVVPKD-SCLIFCSSRKNCENV 485
Query: 796 ARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTV 855
A ++K L K S+ H ++ + + ++AL R GL P+L++T+ GVAYHH+GLT
Sbjct: 486 ALLLTKILFK-SLEAHKTNEK----QNLLNALER-EEGLCPILQKTIRFGVAYHHSGLTA 539
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
EER ++E ++ G + V+ TSTLAAGVNLPARRVI R P +G +FI+ +RY+QM+GRAG
Sbjct: 540 EERRLLEDAFKAGTLCVICCTSTLAAGVNLPARRVILRSPYVGSEFINLSRYKQMSGRAG 599
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKN-GMTHAILEVVAGGIVQT 974
R G+ GES++ICK E+ K+ LL S L +K+ G+ + IL + I +T
Sbjct: 600 RAGMGDIGESIIICKNNELPKVKELLESKMDDCISSLHVNKDRGINNLILSAILYSIAKT 659
Query: 975 AEDIHRYVRCTLLNSTKP-----FQDVVKSAQDSL------------------------- 1004
++ + TLLN + + +V SA L
Sbjct: 660 RFELQKLATRTLLNIQQERLGINIKHIVDSAITELLKSGVIKVKDKSKSIDVYQPNITVA 719
Query: 1005 ---RWLCH---------RKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAR 1052
+ C +K ++ DTKL LGRAA + + + + +DL +A+
Sbjct: 720 IPSQITCPNESDIEKKVKKSIQLMNDTKL-DLCNLGRAAMKGCIDIQCAYTLYEDLKKAQ 778
Query: 1053 EGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMA 1110
E VL LHL+YL TP ++ +V+ +YY+ + LS +G++E +
Sbjct: 779 EHLVLIDYLHLLYLVTPYDIIPQVKVVGSVYYDVVINLSETQMKTARVLGINEVAI---- 834
Query: 1111 HGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETP 1170
+K+RD G+ N+ RV +RFYV LIL L +
Sbjct: 835 --------TKIRD-------------GLMPKNVEP-----RVVQRFYVTLILYDLWCQHA 868
Query: 1171 VLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLEGLIAKFQNRVSFGVRAE 1229
V + E ++V RG VQ L FA V FC+ L ++ + L+ F ++S+ E
Sbjct: 869 VYTIAEKYQVNRGTVQNLLSAVSTFAFSVVRFCQELDEFWAFKDLLDAFSKKLSYCCPLE 928
Query: 1230 IVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVA 1289
+ L +P VK RAR LY AG +T IA+ E L E ++++ A
Sbjct: 929 LEALMDLPLVKIGRARQLYNAGFKTVQCIAKVQPKE----LLEKVPYLSKK-------TA 977
Query: 1290 KKIKNGARKIVLEKAE 1305
I A+ I+LEK +
Sbjct: 978 THIIEAAKLIILEKIQ 993
>gi|440801182|gb|ELR22203.1| helicase domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 788
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 283/820 (34%), Positives = 429/820 (52%), Gaps = 137/820 (16%)
Query: 506 SSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLR 564
S W LP + I +RGI++ Y WQ+ECL+ L N + TS GK+ VAEI +LR
Sbjct: 79 SLWGLPPAVAEILGQRGITQFYEWQLECLNSRAFLSGENFLLSLPTSGGKTLVAEIALLR 138
Query: 565 RLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTI 624
+ G+ LLVLPYVS+ AEK+ LE LG T V V
Sbjct: 139 CIQVAGRTGLLVLPYVSLVAEKSLALEQFTTALGFR----------------TEVGV--- 179
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDEL-----------HMVADQNRGYLLELLLTKLRYA 673
+V+++ EEGRL+E+G +V+DEL HM+ D RG LE LL+K+ +
Sbjct: 180 -----IVSQLAEEGRLAELGAVVVDELRNVANRPDSTSHMIGDGERGAALEHLLSKVLFL 234
Query: 674 AGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPL 733
S T+ QIVGMSAT+ N+ V WL+A Y T+FRPVPL
Sbjct: 235 -------------SPTT----------QIVGMSATIGNLPQVGRWLRATTYTTDFRPVPL 271
Query: 734 EEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCE 793
+ IK+G+ ++ ++ +R + + D + ++ L EV+ + HSVLIFC +++ E
Sbjct: 272 RQMIKIGSHVFDERGHRLRRM----DPDSHDAEQMLPLITEVIPQ-HSVLIFCPTKRQTE 326
Query: 794 STARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGL 853
A+ +S L S ++ + E + + LR +G+D +L TLP+GVAYHH+GL
Sbjct: 327 VCAKTLSVALPPASPDLRQA-RELV-----LQRLRASGSGVDSLLASTLPAGVAYHHSGL 380
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T EERE++E YR + VL TSTLAAGVNLPARRVI R P G F+ RY QM GR
Sbjct: 381 TTEEREIIEEAYRSRAINVLLCTSTLAAGVNLPARRVIIRAPYTGNAFLTRARYLQMVGR 440
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPP-LHSCLSEDKNGMTHAILEVVAGGIV 972
AGR G+D GES+LI K E+ ++ + LL PP L C E + +L+ +A
Sbjct: 441 AGRAGLDEYGESILIIKKEDKQRGIALLQGDIPPALSQCRDE---ALHRVLLDALASRYA 497
Query: 973 QTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAF 1032
T +D+ CT ++ T LR L + E + + +T+
Sbjct: 498 PTTDDL-----CTFMSYT-------------LRGL---EAWEGAGEARAEATS------- 529
Query: 1033 GSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI-NVEVEPDWELYYERFLELSAL 1091
S L P +L + D+L AR ++A +LHL YL TPI N+ PDW + + +L A+
Sbjct: 530 RSGLTPLVALALRDELENARRRLIVADELHLCYLVTPIGNLLDPPDWMGLFNTYQKLGAV 589
Query: 1092 DQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLR 1151
Q +G+ VGV E YL A G ++++ D + H
Sbjct: 590 KQEIGSAVGVREAYLSARATG---KVATT--DEARRSHF--------------------- 623
Query: 1152 VCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDL 1211
VC+RF+ AL+L +++E P+ ++ + ++V RG +Q L + A FA+M VFC+++GW++L
Sbjct: 624 VCQRFFTALVLHDVLREVPLRDITDRYRVNRGSIQQLMQKASSFANMSRVFCQQMGWWEL 683
Query: 1212 EGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
L+ K+ R+ GV+ E+V L + +K ARAL++AG ++P AIA+A ++V
Sbjct: 684 AVLMDKYVPRLFHGVKEELVPLVELASLKQPHARALFQAGYQSPRAIAQAQAEDLVARAG 743
Query: 1272 ESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEEARIAA 1311
S + E VA+++ + A+ ++ ++A E R +A
Sbjct: 744 LGSHFSVE--------VAQRVIDEAKALLEKRAAEMRASA 775
>gi|336464070|gb|EGO52310.1| hypothetical protein NEUTE1DRAFT_90455 [Neurospora tetrasperma FGSC
2508]
Length = 902
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 284/892 (31%), Positives = 434/892 (48%), Gaps = 142/892 (15%)
Query: 471 SDSPTNVIKKPVGNEKSDEAGTPSSSGMLKD-CLDLSS---WLPSEICSIYKKRGISKLY 526
+D K + +E S PS+ D L LS LP ++ + + GI +Y
Sbjct: 18 ADPVATAAKGGIPSEYSQRRALPSTPTSTSDPLLSLSHPAYKLPKQLVANFASLGIKTIY 77
Query: 527 PWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI---STGKMALLVLPYVSI 582
PWQ +CL G+L +NLVY A T GKS VA++LML+R++ + A+LVLPYV++
Sbjct: 78 PWQKQCLLGPGLLSGDKNLVYSAPTGGGKSLVADLLMLKRVLDDPAGEAKAILVLPYVAL 137
Query: 583 CAEKAEHLEVLLEPLGR---------------------------HVRSYYGNQGGGSLPK 615
EK L ++ + R V ++G +
Sbjct: 138 VQEKVRWLRNVVSGISRSGDLGQKQPHLEGKQQLWARRPDKDTIRVVGFFGGSKMRATWA 197
Query: 616 DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAG 675
D VAVCT+EKANSL+N + + +S++ +V+DE HM+ D RGYLLEL+ TKL
Sbjct: 198 DFDVAVCTMEKANSLINAAITDCSISKLRAVVLDECHMIDDGYRGYLLELMTTKLLCLDQ 257
Query: 676 EGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
+ +QI+ MSAT+ N+ + DWL YET++RPVP+EE
Sbjct: 258 Q-----------------------VQIIAMSATLTNIRLLKDWLGGHSYETHYRPVPIEE 294
Query: 736 YIKVGNAIY-----------SKKMDV----------------------VRTILTAANLGG 762
++ IY + ++D +R I + +
Sbjct: 295 HLVYDGKIYPATTTASLLKTATQLDTRNATTTTTTQGPPPSTTSSLQHIRFIHPSLHREF 354
Query: 763 KDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDI 820
KDP + +V L +E + G+ VL+F SSR GCES A +S+ L F +D+
Sbjct: 355 KDPVLNAVVALANETARAGYGVLVFSSSRAGCESDAVLISRVLPSFQEADPLIRERRLDL 414
Query: 821 TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLA 880
++ LR GLD LE+T+P GVA+HHAGLT EERE++ Y G ++V AT++LA
Sbjct: 415 ---LNDLRSSSTGLDCKLEQTIPCGVAFHHAGLTTEERELIANAYDAGTLKVCVATASLA 471
Query: 881 AGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGL 940
AG+NLPARRVI R+G D + RQM GRAGR G D GE+ L C+ +++ ++ L
Sbjct: 472 AGINLPARRVILHGARMGIDLVGPAMLRQMRGRAGRKGKDEVGETYLCCRRNDLEAVVDL 531
Query: 941 LNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLL--------NSTKP 992
++ P + SCL D+ + A+LEV+A + + E + YV T+L T+
Sbjct: 532 MHADLPQIASCLVSDERRIRRALLEVIAIKLATSREALDEYVGRTMLACEQRLAEKETEE 591
Query: 993 FQDVVKS-AQDSLRWLCHRKFLEWNEDTKL----YSTTPLGRAAFGSSLCPEESLIVLDD 1047
++D ++ + L L F+ D + YSTT LG A SSL PE+ + + +
Sbjct: 592 WEDQIRGYIEIGLEKLKEMGFITVTVDERFETASYSTTKLGGAIVASSLDPEDGVFIHKE 651
Query: 1048 LSRAREGFVLASDLHLVYLSTPINV---EVEPDWELYYERFLELSALDQS---VGNQVGV 1101
L RA +GFV+ ++H++Y TP++ +W++++ E+ LD+S V + +G+
Sbjct: 652 LERALKGFVMDGEMHVLYNFTPVSGLGNGTSINWKVFWN---EMEKLDESGLRVMSFLGL 708
Query: 1102 SEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALI 1161
L RM HG GI + T R RFY+AL
Sbjct: 709 KPVVLNRMLHG------------------------GILKETTDEEKDTARRYYRFYLALQ 744
Query: 1162 LSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNR 1221
L L E P+ V + + V RG VQ L + FA+ + FCE +GW + + F +R
Sbjct: 745 LRDLCNEVPIHRVAQKYDVPRGTVQTLAQTCQGFAAGMIKFCEAMGWGAMAAALDHFADR 804
Query: 1222 VSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFES 1273
+ G RA+++ L+ I +VK AR + G +T IA A E+V L ++
Sbjct: 805 LKAGARADLLSLSKITFVKSRTARVFWDNGFKTVAVIANADPKELVPVLMQA 856
>gi|189234951|ref|XP_973059.2| PREDICTED: similar to mutagen-sensitive 301 CG7972-PA [Tribolium
castaneum]
Length = 965
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 293/861 (34%), Positives = 430/861 (49%), Gaps = 142/861 (16%)
Query: 512 EICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGK 571
E+ +YK GI +LY WQ ECL++ + + RNL+Y TS GK+ VAEILMLR ++ K
Sbjct: 160 ELIKMYK--GIDELYDWQDECLNLPAIKEHRNLIYALPTSGGKTLVAEILMLREIMCRKK 217
Query: 572 MALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEK 626
A+ +LPYV+I EK L L V Y ++G + P + S+ + TIEK
Sbjct: 218 NAIFILPYVAIVQEKVWALSPFAVALDFLVEEYAASKG--TYPPRKRRRKNSIYIATIEK 275
Query: 627 ANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGEN 686
A L+N ++E R++EIG+IV+DELH+V + RG LE LLTK+ Y
Sbjct: 276 ALGLLNSLIETDRINEIGLIVVDELHLVGEPGRGSTLEALLTKIMYTNA----------- 324
Query: 687 SGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAI--- 743
+Q+VGMSAT+ NV + +L A +Y NFRPV L EY+K G +
Sbjct: 325 ------------NIQVVGMSATIGNVNDLCQFLNADIYSQNFRPVELVEYVKCGPEVAKI 372
Query: 744 -YSKK---MDVVRTI---LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
YS K + VVR I ++ + DPD + L EVV EG S LIFC+S+K CE+ A
Sbjct: 373 NYSPKDELLTVVRKIDHKYPSSGMNSLDPDKLGALVMEVVPEG-SCLIFCASKKNCENVA 431
Query: 797 RHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVE 856
+ K + K ++ + E + +L+ L + ++ G+AYHH+GLT E
Sbjct: 432 SLLCKVVNKSLLDYKKEEKEQVK-----HSLKDEGGSLCKIFNVSIQLGIAYHHSGLTNE 486
Query: 857 EREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGR 916
ER V+E +R G++ V+ TSTLAAGVNLPA+RVI RQP +GR+FI ++Y+QM GRAGR
Sbjct: 487 ERRVIEEAFRAGVISVICCTSTLAAGVNLPAKRVILRQPYVGREFISLSKYKQMVGRAGR 546
Query: 917 TGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGIV 972
G+ GES+LIC P E+ K+ LL P+ LS + G+ H +L ++ G+
Sbjct: 547 AGLGETGESILICNPPELPKVKKLL---LSPMDEALSGMHQNEGKGLRHLLLSCISLGVA 603
Query: 973 QTAEDIHRYVRCTLLN-------------STKPFQDVVK--SAQDS-------------- 1003
T + + TLL+ + K D+ K + Q++
Sbjct: 604 NTRAQLQEVAKKTLLHIQSERLEINLKKLTDKAISDLFKLGALQEADLSKKENTIDCDVT 663
Query: 1004 -------------LRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSR 1050
+ ++ + DTKL + LG AA + + + DDL +
Sbjct: 664 VKMETSFSSTDSNSSNVSRKRKIVLKNDTKLV-ISKLGCAAIKGNFELARAHQLYDDLHQ 722
Query: 1051 AREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMR 1108
A++ VL LHL++L TP ++ +++PD YY F L + +G+ + +R
Sbjct: 723 AQKSLVLLDCLHLLFLVTPYDLAEQIKPDRNDYYNIFRTLGRNELQTARILGIDDAVALR 782
Query: 1109 MAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQE 1168
M P+R + RV RFY+ L+L L E
Sbjct: 783 MLANQPIRNVPE------------------------------RVLNRFYLTLMLYDLWNE 812
Query: 1169 TPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVR 1227
TPV EV E F+V RG+VQ L A FAS V FCE L ++ L+ R+S
Sbjct: 813 TPVFEVSEKFQVNRGIVQHLMTGAATFASNVVHFCEGLEEFWTFAHLLNGMSQRLSHCCV 872
Query: 1228 AEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLG 1287
E++ L +P VK SRAR LY AG ++ +IA A+ +L ES ++ RR
Sbjct: 873 KELLPLMQLPAVKQSRARQLYNAGYKSIRSIAAAN----ADSLVESIEYLP---RR---- 921
Query: 1288 VAKKIKNGARKIVLEKAEEAR 1308
VAK++ A+ ++LEK E R
Sbjct: 922 VAKQLIAAAKMLMLEKVENLR 942
>gi|391332508|ref|XP_003740676.1| PREDICTED: helicase POLQ-like [Metaseiulus occidentalis]
Length = 851
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 292/829 (35%), Positives = 422/829 (50%), Gaps = 99/829 (11%)
Query: 509 LPSEICSI-YKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS + I +K+RGI LY WQ ECL + V +R+NL+Y TS GK+ VAEIL + LI
Sbjct: 100 LPSNVKDILFKERGIGSLYDWQKECLSLPAVERRQNLIYSLPTSGGKTLVAEILAFKELI 159
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ L +LPYVSI EK L L LG V Y G+ G +P K S+ V
Sbjct: 160 VHRRNVLFILPYVSIVQEKVRALANLGIELGFLVEEYAGSIG--KIPPVKRKKRPSIYVA 217
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVAD-QNRGYLLELLLTKLRYAAGEGTSDS 681
TIEKA+ L+N ++E RL E+G+++IDELHM+ D RG LE+LL KL+ +
Sbjct: 218 TIEKAHFLINALIEAQRLEELGLVIIDELHMIGDGSQRGAGLEVLLVKLKKMSNA----- 272
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN 741
Q++GMSAT+ N+ VA +L A +Y +FRPV L E+I V
Sbjct: 273 -------------------QLIGMSATIGNINEVAGFLNAEIYLGSFRPVELIEHILVER 313
Query: 742 AI------YSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCEST 795
+ + ++ T T+ DPDH+ L +E++ SVL+FC +RK CES
Sbjct: 314 TVLEVTKSFELRLKRKLTRPTSEEQEKCDPDHVTILVEELIPTS-SVLVFCPTRKNCESV 372
Query: 796 ARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTV 855
A ++S+FLK D + + AL + PVL +T+P GVAYHH+GLT
Sbjct: 373 ALNLSRFLKP-----ELRDFRVENKIGLLKALSAEAGRICPVLRKTIPFGVAYHHSGLTN 427
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ER++VE Y G + L TSTLAAGVNLPA+RVI + P +G +F+ RY+QM GRAG
Sbjct: 428 DERKLVEEAYIVGTLSCLCCTSTLAAGVNLPAKRVILKSPYVGVEFLTSARYKQMIGRAG 487
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAI-LEVVAGGIVQT 974
R G+D+ GES+LICK +M LL P+ C S A+ + VV G+V +
Sbjct: 488 RAGLDSSGESILICKASTRSSVMKLLRS---PIEHCRSSVTLETLEALAISVVGMGVVTS 544
Query: 975 A---EDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAA 1031
EDI+R NS + ++V SL K + +E KL + +PLGRA+
Sbjct: 545 TAGLEDIYRESLFCQQNSERDASELVHEVIQSLEA---EKLIFVDEKGKL-TASPLGRAS 600
Query: 1032 FGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE-VEPDWELYYERFLELSA 1090
F + P + DL A L + LHL+YL +P ++E D LY + + EL+
Sbjct: 601 FKGVVEPHRVTSLHRDLRMAMAHLSLTTHLHLIYLISPSDMEPSRLDGMLYMDLYNELTE 660
Query: 1091 LDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTL 1150
D+ V +G++E ++R +R++ ++D + L K
Sbjct: 661 EDRQVAETIGITENLVVR------LRLNKPIKDHERKLLSK------------------- 695
Query: 1151 RVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WY 1209
FYV L L+ L ++ V +V + F+ RG VQ L A A +S FC L ++
Sbjct: 696 -----FYVTLQLNALWKKQNVWQVADRFEEHRGSVQNLLSMATVNAMSISQFCSDLPEFW 750
Query: 1210 DLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKA 1269
L L+ F N +S E+++L +P VK RAR LY AG R IA+A E+V+
Sbjct: 751 ALRDLLPSFVNELSHCSSMELMKLMELPAVKRGRARQLYTAGYRKVSDIAKADPKELVEK 810
Query: 1270 LFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEEARIAAFSAFKSL 1318
L + VA +I A+ +L+KAE+ + A +S
Sbjct: 811 L-----------DHMPCNVAAQIVAAAKHYLLKKAEDLQEEADQVLQSF 848
>gi|313233190|emb|CBY24305.1| unnamed protein product [Oikopleura dioica]
Length = 1902
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 263/792 (33%), Positives = 408/792 (51%), Gaps = 109/792 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+E+ ++ RG L+ WQ E L+++GVL RNL+Y TS+GK+ V+EIL+ RR
Sbjct: 8 LPNELVKKFQSRG--SLFQWQQEVLNLEGVLNGNRNLIYAGPTSSGKTLVSEILIARR-T 64
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYG-NQGGGSLPKDTSVAVCTIEK 626
+ GK ++V P+V+I EK + + + + G N G + K+ + VCTIEK
Sbjct: 65 AEGKKVIVVFPFVAIAREKYFAFREIFQNTKIRIGLFAGGNHPTGGIEKN-DILVCTIEK 123
Query: 627 ANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGEN 686
ANS+VN + +G I +DE+H++ + RG++LELL TK
Sbjct: 124 ANSIVNYLKMTKIFDSLGAIFLDEIHLLGESGRGFILELLCTK----------------- 166
Query: 687 SGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS- 745
A +QIVGMSAT+PN++ +A WL+A ++T+FRP+PLE + N ++
Sbjct: 167 -------AMTWGNIQIVGMSATIPNLSQIAGWLKAIEFQTDFRPIPLEINLCFKNQLWEV 219
Query: 746 -----KKMDVVRTILTAANLGGKDPDH--IVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
K++ V + KDP+ I+ L + + +GH ++FC ++ CE +
Sbjct: 220 SGARLKRLTSVEIPIDIGKDPPKDPEQYAILSLLLQTIIQGHQAMVFCPTKDWCE---KM 276
Query: 799 VSKFLKKFSINVHSSD----SEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
V +++ ++ + SD F + + R P D + + G+ +HHAGLT
Sbjct: 277 VKTLVEQTALIPNRSDVFQSKIFEEFREVLIEARIWP---DTSMYLNVKQGICFHHAGLT 333
Query: 855 VEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPR-IGRDFIDGTRYRQMAGR 913
+ER VVE +R G+VR+L AT+TL+AGVNLPAR V+ R P ++ I ++QM GR
Sbjct: 334 TDERSVVEEGFRAGVVRILMATTTLSAGVNLPARLVVVRSPYGFKKELIKARVFQQMCGR 393
Query: 914 AGRTGIDTKGESMLICK--PEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVA--G 969
AGR GID G ++L+C P K L++ + S L D+ + AILE +A
Sbjct: 394 AGRKGIDDAGHAVLMCPNVPSAQKDARQLISNKAEMILSQL--DRTQIQRAILEQIATTD 451
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGR 1029
+ T E+I ++ TL H + + +E T LG
Sbjct: 452 KLTVTVEEIEEFISSTLY---------------------HHQLEDLSESD--IEITKLGE 488
Query: 1030 AAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERF--LE 1087
AA G+ + P +L V DDLS A L +DLHLVYL TPI E ++ F LE
Sbjct: 489 AAVGAGMPPVTALSVFDDLSSASRSLNLTTDLHLVYLCTPIQ-ETNLNFSTVASMFDILE 547
Query: 1088 LSALDQSVGNQVGVSEPYLMRMA-HGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSD 1146
+ALD V N+ V + ++A HG P ++ +LG
Sbjct: 548 PAALD--VANKCQVDVKLVKKIARHGMPRKMD----------------KLG--------- 580
Query: 1147 AQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL 1206
+ L++ RFY AL + L+ E P+ V ++V RG +Q+LQ +A ++A M+++FCE+L
Sbjct: 581 NRKLQIISRFYRALGIFDLINEIPIEIVSSKYQVPRGTLQSLQISASQYAGMITIFCEKL 640
Query: 1207 GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEI 1266
GW L L+A FQN++ GV E+++L P++ RAR YK G + I +A ISEI
Sbjct: 641 GWAHLRNLLATFQNQIEAGVHRELLDLVRCPFISARRARQFYKLGYKRLKNIVKADISEI 700
Query: 1267 VKALFESSSWIA 1278
V+A + S+I+
Sbjct: 701 VEAFKQMESFIS 712
Score = 131 bits (329), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 143/298 (47%), Gaps = 42/298 (14%)
Query: 1881 TGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC-KINARDFFIPSQENWILLAADY 1939
TGR+SM+ P+LQ V++ EF + G +V +C + N + FI + DY
Sbjct: 1646 TGRISMDNPSLQMVQN--EF-----ECCGKIIKVRNCFRANPKKIFI---------SVDY 1689
Query: 1940 SQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGIL 1999
Q+ELR++A S D L H D F I +W R SV +R Q K L+YG++
Sbjct: 1690 RQLELRVLALLSGDEGLQASFID-HEDPFVSIGRKWLKRERISVA--QRTQVKGLVYGVI 1746
Query: 2000 YGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFL 2059
YGMG TLS L S EAK F SS+PG+ +L S Y E+L GR+R
Sbjct: 1747 YGMGNKTLSTTLGVSIEEAKNISSEFMSSYPGMQKFLVDVDKSASSNLYTETLIGRRR-- 1804
Query: 2060 SKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQML 2119
F N S+A R AVN+ QGSAADI+KI + A +
Sbjct: 1805 ---SFDNY--TSRAARVAVNTKIQGSAADIVKIGTVRA---------------ARKIKET 1844
Query: 2120 KGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+L+LQ+HDEL+ EV+ S +++K + V VK++ G +W L+
Sbjct: 1845 GINAKLVLQIHDELLFEVEESQKGLLEDILKKVLPLENEYAVRFDVKVKKGLSWDRLK 1902
>gi|322701043|gb|EFY92794.1| helicase and polymerase containing protein tebichi [Metarhizium
acridum CQMa 102]
Length = 886
Score = 399 bits (1024), Expect = e-107, Method: Compositional matrix adjust.
Identities = 258/818 (31%), Positives = 413/818 (50%), Gaps = 110/818 (13%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
L +I S GI +YPWQ CL G+L RNLVYCA T GKS VA++LML+R+I
Sbjct: 121 LQRQIVSNLSSLGIKHIYPWQKNCLKGPGLLTGERNLVYCAPTGGGKSLVADLLMLKRVI 180
Query: 568 S-TGKMALLVLPYVSICAEKA-------EHLEVLLEPLGRHV-------RSYYGNQ---- 608
G ALLVLPYV++ EK +H+++L + + R+ YG
Sbjct: 181 EEAGTKALLVLPYVALVQEKVGWLRKVVQHVKILDRSMSQGAENGPWRRRADYGTIRVVG 240
Query: 609 --GGGSLPK---DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLL 663
GGG + D + VCT+EKAN+L+N + +G +S++ +V+DELH++ D +RGY+L
Sbjct: 241 FFGGGKVRATWDDFDIGVCTLEKANALINTAIADGSISKLRSVVLDELHIIDDDHRGYIL 300
Query: 664 ELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAAL 723
EL+ KL + +Q++GMSAT+PN+ +A WL
Sbjct: 301 ELIAAKLLCLGQQ-----------------------VQLIGMSATLPNLNLLASWLHGHT 337
Query: 724 YETNFRPVPLEEYIKVGNAIY---------------------SKKMDVVRTILTAANLGG 762
YET +RPVP+EE++ ++ + K VR I + +
Sbjct: 338 YETRYRPVPIEEHLVYDGKVFLAGPNDGLGHTPSQLGSQDVSAGKTAPVRRIENSVHKEF 397
Query: 763 KDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDI 820
D + +V L E G+ VL+F SR CES AR +S+ + + + +D+
Sbjct: 398 TDSVLNAVVSLAHETACMGYGVLVFAGSRGVCESDARWISRVMPQLHELAADVLKKRLDL 457
Query: 821 TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLA 880
+ LR G DPVLEET+ GVA+HHAGLT EER+++ Y G + V AT +LA
Sbjct: 458 ---LGDLRSLSTGADPVLEETVLYGVAFHHAGLTSEERDLIAAAYDAGTILVCIATCSLA 514
Query: 881 AGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGL 940
AG+NL VI ++GR++I RQM GRAGR G GE+ L C+ +++ ++ L
Sbjct: 515 AGINL----VILHNVKMGREYIGPAMLRQMRGRAGRQGKTQLGETYLCCRQPDLEHVLEL 570
Query: 941 LNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSA 1000
++ P + SCLS + + A+LEV++ + + E I Y +LL ++ V K
Sbjct: 571 MHADIPKVSSCLSTENRRIQRALLEVISIRLATSRESISDYFSNSLLQWSQSPDFVHKGI 630
Query: 1001 QDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD 1060
+ SL L + + T Y+ T LG+A S++ P++ + V +L +A FV+ +
Sbjct: 631 ELSLEELQSMGLIMPDSSTG-YAPTQLGKAIVASAIDPDDGVFVHKELVKALRAFVMDGE 689
Query: 1061 LHLVYLSTPI-NVEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAHGAPMR 1116
+H++Y+ TP+ + +W+++ E+ LD+S V +G+ ++R+A GA
Sbjct: 690 MHILYVFTPVQDFGTTVNWQVFRN---EMEYLDESSMRVLQFLGIKPTSVLRLAQGA--- 743
Query: 1117 ISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCE 1176
I + Q RV +RFY+A+ L L E P+ V
Sbjct: 744 ---------------------ILKETTTEEKQMARVYRRFYLAMQLRDLCNEVPIHAVAR 782
Query: 1177 TFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTI 1236
+ + RG VQ L + FA+ + FCE +GW + + F +R+ G R+E++ L+ +
Sbjct: 783 KYDMPRGSVQTLSQTCQGFAAGMVKFCEHMGWGPMAAALDHFSDRLMAGARSELLALSKV 842
Query: 1237 PYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESS 1274
P++K AR ++ G R+ A+A A+ ++V L + +
Sbjct: 843 PFIKSRTARVFFENGYRSVAALANANPKDLVPILMQPT 880
>gi|307195274|gb|EFN77230.1| ATP-dependent DNA helicase HEL308 [Harpegnathos saltator]
Length = 1054
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 282/872 (32%), Positives = 438/872 (50%), Gaps = 140/872 (16%)
Query: 501 DCLDLSSWLPSEICS--IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVA 558
+C +L+ + S++ I + +GI +LY WQ ECL + + R+NL+Y TS GK+ VA
Sbjct: 239 ECQNLTFYGLSDVAKKMIQEVKGICELYEWQDECLKL-AIKTRKNLIYALPTSGGKTLVA 297
Query: 559 EILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK--- 615
EILMLR +I K A+ +LPYV++ EK + + +L LG V Y +G K
Sbjct: 298 EILMLREIICNKKNAIFILPYVALVQEKVQSMAILALKLGFLVEEYASTKGCYPPTKRRR 357
Query: 616 DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQN-RGYLLELLLTKLRYAA 674
S+ +CTIEKA LVN ++E RL+EIGIIV+DELH++ + RG LE LLTK+ +
Sbjct: 358 KNSIYICTIEKALGLVNSLIEMKRLAEIGIIVVDELHLLGESGGRGATLEGLLTKIMFFD 417
Query: 675 GEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLE 734
++++GMSAT+ N+ +A +L A Y NFRPV +
Sbjct: 418 D-----------------------MIRLIGMSATIGNLKEIAQFLNADTYSQNFRPVKIT 454
Query: 735 EYIKVGNAIYSKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFC 786
EY+K N ++ + ++ +N K DPD I L EV S LIFC
Sbjct: 455 EYVKCENCMWKVNFNNEELLVEISNNDYKYPDDIAVLDPDRIGNLVMEVA-PNDSCLIFC 513
Query: 787 SSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGV 846
SSRK CE+ A ++K L + + + ++ + ++ L+ GL +L +TLP GV
Sbjct: 514 SSRKNCENLALLLTKVLPR-----SLGNYKVMEKRTLLNILKT-EEGLCEILRKTLPFGV 567
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
AYHH+GLT EER ++E +++G++ V+ TSTLAAGVNLPARRVI R P +G F++ +R
Sbjct: 568 AYHHSGLTSEERRLLENAFKEGVLCVICCTSTLAAGVNLPARRVILRSPYVGNQFLNLSR 627
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLL----NESCPPLHSCLSEDKNGMTHA 962
Y+QM GRAGR G+ GES+LICK E+ K+ LL ++S LH E+ G+ +
Sbjct: 628 YKQMIGRAGRAGMGVLGESILICKKPEISKVKDLLTSQMDDSLSSLHV---ENDRGINNL 684
Query: 963 ILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDV-VKSAQDSLRWLCHR----------- 1010
IL + + T ++H+ + TLL + DV VKS D +
Sbjct: 685 ILSAIQLNMATTRYELHKLMDITLLGIQQNRLDVNVKSITDETITALLKCGVIKIKNKDK 744
Query: 1011 ----------------------------KFLEWNEDTKLYSTTPLGRAAFGSSLCP---E 1039
K + + +TK + LG+AA P +
Sbjct: 745 ISNPNVTVVIPSQESTDIEKLKSSKKEVKTVTFTSETK-FQLCDLGQAAMKGKNGPIDLK 803
Query: 1040 ESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGN 1097
+ + +DL A++ +L +LHL+YL TP +V ++ P +YY+ + L+ V
Sbjct: 804 TAYKLYEDLKTAQKHLILIDNLHLLYLVTPYDVVSQITPVGNIYYDVIMTLTDSQMQVAR 863
Query: 1098 QVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFY 1157
+G++E ++K+RD GIT ++ RV +RFY
Sbjct: 864 LLGITEA------------TANKIRD-------------GITPKSVEK-----RVVERFY 893
Query: 1158 VALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLEGLIA 1216
V LI+ L V V + ++V RG+VQ L FAS FC+ L ++ ++
Sbjct: 894 VTLIIHELWNHHSVYFVAQKYQVNRGVVQNLLNTVSMFASSTVRFCQELSEFWAFTEMLG 953
Query: 1217 KFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSW 1276
F ++S+ +E+ L +P VK RAR LYKAG ++ +IA+A K L E +
Sbjct: 954 TFSKKLSYCCPSELETLMELPSVKIGRARQLYKAGYKSLQSIAKAD----SKVLQEQIPY 1009
Query: 1277 IAEAQRRVQLGVAKKIKNGARKIVLEKAEEAR 1308
++ + +I A+ ++L+KAE+ +
Sbjct: 1010 LSNK-------IVAQIIAAAKLLILQKAEDLK 1034
>gi|350296152|gb|EGZ77129.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 1061
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 280/890 (31%), Positives = 429/890 (48%), Gaps = 137/890 (15%)
Query: 471 SDSPTNVIKKPVGNEKSDEAGTPSSSGMLKD-CLDLSS---WLPSEICSIYKKRGISKLY 526
+D K + +E S PS+ D L LS LP ++ + + GI +Y
Sbjct: 176 ADPIATAAKGGIPSEYSQRRALPSTPTSTSDPLLSLSHPAYKLPKQLVANFASLGIKTIY 235
Query: 527 PWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI---STGKMALLVLPYVSI 582
PWQ +CL G+L +NLVY A T GKS VA++LML+R++ + A+LVLPYV++
Sbjct: 236 PWQKQCLLGPGLLSGDKNLVYSAPTGGGKSLVADLLMLKRVLDDPAGEAKAILVLPYVAL 295
Query: 583 CAEKAEHLEVLLEPLGR---------------------------HVRSYYGNQGGGSLPK 615
EK L ++ + R V ++G +
Sbjct: 296 VQEKVRWLRNVVSGISRSGDLGQKQPHLEGKQQLWARRPDKDTIRVVGFFGGSKMRATWA 355
Query: 616 DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAG 675
D VAVCT+EKANSLVN + + +S++ +V+DE HM+ D RGYLLEL+ TKL
Sbjct: 356 DFDVAVCTMEKANSLVNAAITDCSISKLRAVVLDECHMIDDGYRGYLLELMTTKLLCLDQ 415
Query: 676 EGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
+ +QI+ MSAT+ N+ + DWL YET++RPVP+EE
Sbjct: 416 Q-----------------------VQIIAMSATLTNIRLLKDWLGGHSYETHYRPVPVEE 452
Query: 736 YIKVGNAIY-----------SKKMDV-----------------------VRTILTAANLG 761
++ IY + ++D +R I + +
Sbjct: 453 HLVYDGKIYPATTTASLLKTATQLDTRNVTTTTTTAQGPPPSTTSSLQHIRFIHPSLHRE 512
Query: 762 GKDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFID 819
KDP + +V L +E + G+ VL+F SSR GCES A +S+ L F +D
Sbjct: 513 FKDPVLNAVVALANETARAGYGVLVFSSSRAGCESDAVLISRVLPSFQEADPLIRERRLD 572
Query: 820 ITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTL 879
+ ++ LR GLDP LE+T+P GVA+HHAGLT EERE++ Y G ++V AT++L
Sbjct: 573 L---LNDLRSSSTGLDPKLEQTIPCGVAFHHAGLTTEERELIANAYDAGTLKVCVATASL 629
Query: 880 AAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMG 939
AAG+NLPARRVI R+ D + RQM GRAGR G D GE+ L C+ +++ ++
Sbjct: 630 AAGINLPARRVILHGARMVIDLVGPAMLRQMRGRAGRKGKDEVGETYLCCRRNDLEAVVD 689
Query: 940 LLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLL--------NSTK 991
L++ P + SCL D+ + A+LEV+A + + E + YV T+L T+
Sbjct: 690 LMHADLPQIASCLVSDERRIRRALLEVIAIKLATSREALDEYVGRTMLACEQRLAEKETE 749
Query: 992 PFQDVVKS-AQDSLRWLCHRKFLEWNEDTKL----YSTTPLGRAAFGSSLCPEESLIVLD 1046
++D ++ + L L F+ D + YSTT LG A SSL PE+ + +
Sbjct: 750 EWEDQIRGYIEIGLEKLKEMGFITVTVDERFETASYSTTKLGGAIVASSLDPEDGVFIHK 809
Query: 1047 DLSRAREGFVLASDLHLVYLSTPIN---VEVEPDWELYYERFLELSALDQSVGNQVGVSE 1103
+L RA +GFV+ ++H++Y TP++ +W++++ +L V + +G+
Sbjct: 810 ELERALKGFVMDGEMHVLYNFTPVSGLGNGTSINWKVFWNEMEKLHESGLRVMSFLGLKP 869
Query: 1104 PYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILS 1163
L RM G GI + T R RFY+AL L
Sbjct: 870 VVLNRMLQG------------------------GILKETTDEEKDTARRYHRFYLALQLR 905
Query: 1164 RLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVS 1223
L E P+ V + + V RG VQ L + FA+ + FCE +GW + + F +R+
Sbjct: 906 DLCNEVPIHRVAQKYDVPRGTVQTLAQTCQGFAAGMIKFCEAMGWGAMAAALDHFADRLK 965
Query: 1224 FGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFES 1273
G RA+++ L+ I +VK A + G +T IA+A E+V L ++
Sbjct: 966 AGARADLLSLSKITFVKSRTAGVFWDNGFKTVAVIAKADPKELVPVLMQA 1015
>gi|47210458|emb|CAF94327.1| unnamed protein product [Tetraodon nigroviridis]
Length = 969
Score = 395 bits (1016), Expect = e-106, Method: Compositional matrix adjust.
Identities = 273/835 (32%), Positives = 432/835 (51%), Gaps = 122/835 (14%)
Query: 509 LPSEICSI-YKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+++ + Y RGI LY WQ CL+++ + R+NL+Y TS GK+ VAEIL+LR L+
Sbjct: 200 LPTKVKDLMYSLRGIKNLYAWQETCLNLECIQARKNLIYSLPTSGGKTLVAEILILRELL 259
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTI 624
K L +LPY+S+ EK L L V Y G++G K +S+ + TI
Sbjct: 260 CRRKDCLFILPYISLVQEKVRGLASFGLELDFMVEEYAGSKGKFPPLKRRSKSSLYIATI 319
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
EKA+SLVN ++E GRL +G++V+DELHM+ D +RG ++E+ L K+ Y
Sbjct: 320 EKAHSLVNSLIEAGRLENLGLVVVDELHMLGDGSRGAVIEMTLAKVLYM----------- 368
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRP-----------VPL 733
S T+ QI+GMSAT+ N+ + ++L+A Y +FRP V L
Sbjct: 369 --SKTT----------QIIGMSATLGNIRDLQEFLRAENYTNDFRPSAAVLKVFSGQVQL 416
Query: 734 EEYIKVGNAIYSK--------KMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIF 785
+EY+K+ + IY + V ++++ DPDHI+ L EV+ + +S L+F
Sbjct: 417 QEYVKLQDTIYEVDPKEEECFRFSRVLNFKYSSSMQKLDPDHIIALVTEVIPK-NSCLVF 475
Query: 786 CSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPS 844
C ++K CE+ + K+LK+ + + + + L+ G + PVL T+P
Sbjct: 476 CPTKKNCENVVGLICKYLKEDFLKQRKEEKALL-----LRDLKESGNGSMCPVLRRTIPF 530
Query: 845 GVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDG 904
G+AYHH+GLT EER++VE Y G++ +L TSTLAAG+NLPARRVI R P + DF+
Sbjct: 531 GLAYHHSGLTSEERKLVEQAYSDGVLCLLACTSTLAAGINLPARRVILRSPYVATDFLKR 590
Query: 905 TRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMT 960
++Y+QM GRAGR GID+ GES+L+ + ++ L+ C P +C S +D G+
Sbjct: 591 SQYKQMVGRAGRAGIDSVGESILVLQDKDTHMARSLV---CAPTENCYSNLMRDDGKGLL 647
Query: 961 HAILEVVAGGIVQTAEDIHRYVRCTLLNSTK----PFQDVVKSAQDSLRWLCHRKFLEWN 1016
+L ++ I + + + ++ TLL + + + ++ Q ++ L R +
Sbjct: 648 SLLLSLIGLKITTSMDQVRAFLSGTLLYVQQEQLCADRSLWEAVQRCVQLLEDRGLITGT 707
Query: 1017 EDTKLY--STTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV-- 1072
E ++ + T LGRA + S+ S ++ DL++ +G +L S LHL YL TP +
Sbjct: 708 ERSQGHPLQVTKLGRATYKGSVDLTYSKVLYQDLTKGLDGLLLNSYLHLAYLVTPYEMLS 767
Query: 1073 EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKL 1132
+ +PDW Y +F LS +Q + +GV E +L+R A G +R +D
Sbjct: 768 QCKPDWMTYLRQFTLLSPAEQRMTTAIGVPESFLVRQAAGQTVR-----KDI-------- 814
Query: 1133 EYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENA 1192
L V KR Y+AL+L L++ET + V E F+++RG +Q L ++
Sbjct: 815 ----------------DLDVVKRMYLALVLFTLLKETNLWSVAEKFQLSRGFIQVLLSSS 858
Query: 1193 GRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGL 1252
F S V F E + R+S+ V AE++ L + V SRA+ LY AG
Sbjct: 859 SAFCSCVLHFTESSA--------DRVTRRLSYCVTAELIPLMEVAGVLESRAKQLYNAGY 910
Query: 1253 RTPLAIAEAS---ISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKA 1304
+TP +A A +S+ ++ L++ A +I AR +V EKA
Sbjct: 911 KTPSHLASADPAVLSKTIENLYKKQ--------------AHQIVASARMLVNEKA 951
>gi|390475462|ref|XP_002807658.2| PREDICTED: DNA polymerase theta-like [Callithrix jacchus]
Length = 2414
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/462 (45%), Positives = 290/462 (62%), Gaps = 37/462 (8%)
Query: 480 KPVGNEKSDEAG--TPSSSGMLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVD 536
K G + + AG P++ D L L++W LP + Y G+ K++ WQ ECL +
Sbjct: 50 KDRGRQSAATAGECKPTAPDCQIDKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLG 109
Query: 537 GVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEP 596
VL+ +NLVY A TSAGK+ VAE+L+L+R++ K AL +LP+VS+ EK +L+ L +
Sbjct: 110 QVLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQE 169
Query: 597 LGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVAD 656
+G V Y G+ VAVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D
Sbjct: 170 VGIKVDGYMGSTSPARHFSSLDVAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGD 229
Query: 657 QNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGL----QIVGMSATMPNV 712
+RGYLLELLLTK+ Y + + T+S +AD A L QIVGMSAT+PN+
Sbjct: 230 SHRGYLLELLLTKICYISRK------------TASSQADLASSLSNAVQIVGMSATLPNL 277
Query: 713 AAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELC 772
VA WL A LY T+FRPVPL E +KVGN+IY + +VR + G D DH+V LC
Sbjct: 278 EVVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSVKLVREFQPMLQVKG-DEDHVVSLC 336
Query: 773 DEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSS------DSEFI-------D 819
E +++ HSVL+FC S+K CE A +++ N+H SEF D
Sbjct: 337 YETIRDNHSVLLFCPSKKWCEKLADIIAREF----YNLHHQAEGLVKSSEFPPVILEQKD 392
Query: 820 ITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTL 879
+ +D LR P+GLD VL++T+P GVA+HHAGLT EER+++E +R+GL+RVL ATSTL
Sbjct: 393 LLEVMDQLRCLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTL 452
Query: 880 AAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDT 921
++GVNLPARRVI R P G +D Y+QM GRAGR G+DT
Sbjct: 453 SSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDT 494
Score = 248 bits (632), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 261/535 (48%), Gaps = 83/535 (15%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C +++LQ KL +E +AY
Sbjct: 1884 LNSLLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHILQAKLDAIETQAYQ 1943
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHP 1818
LAG FS ++ DIA VL+ LKLP P G K G+Q
Sbjct: 1944 LAGHSFSFTSSDDIAEVLFLELKLP-PNGEMKNQGSKKTLGSTRRGNDNGRKLRLGRQF- 2001
Query: 1819 STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTS 1878
ST K L+ L+ HP+ +I E R + + + + R++ ++ Q+
Sbjct: 2002 STSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-VSQSH 2060
Query: 1879 TATGRLSMEEPNLQCVEHMVEFKM--------------------SNEDIYGGNAEVDHCK 1918
TATGR++ EPN+Q V E KM I G + C+
Sbjct: 2061 TATGRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGKIKKGWSLNPGCQ 2120
Query: 1919 ---------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP 1963
++ R F+P ++LAADYSQ+ELR++AH S D LI +L+
Sbjct: 2121 AQMEERAAERGMPFSVSMRHAFVPF-PGGLILAADYSQLELRILAHLSHDRRLIQVLNS- 2178
Query: 1964 HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIK 2023
DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A I
Sbjct: 2179 GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYID 2238
Query: 2024 SFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQ 2083
SFKS + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQA+N+ Q
Sbjct: 2239 SFKSRYTGINQFMRETVKNCKRDGFVQTILGRRRYLPGIKENNPYHKAHAERQAINTTVQ 2298
Query: 2084 GSAADIIKIAMINI-------HSIIVGGVYK------------PDSSLAANFQMLKGRCR 2124
GSAADI+KIA +NI HS ++ P L F ++G
Sbjct: 2299 GSAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDQTGLLPKRKLQGMFCPIRGGF- 2357
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+LQ+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L+ F
Sbjct: 2358 FILQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDF 2412
Score = 107 bits (268), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 25/190 (13%)
Query: 1077 DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
DW ++ + +L + V VGV E +L R G K+ T+ H
Sbjct: 506 DWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVARTERQH------- 551
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
+ + + KRF+ +L+L L+ E P+ ++ + + RG +Q+LQ++A +A
Sbjct: 552 -----------RQMAIHKRFFTSLVLLDLISEVPLRKIIQKYGCNRGQIQSLQQSAAVYA 600
Query: 1197 SMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPL 1256
M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR LY +G T
Sbjct: 601 GMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLIRVSLLNAPRARVLYASGFLTVA 660
Query: 1257 AIAEASISEI 1266
+A A+I+E+
Sbjct: 661 DLARANIAEV 670
>gi|380011352|ref|XP_003689772.1| PREDICTED: helicase POLQ-like [Apis florea]
Length = 929
Score = 391 bits (1005), Expect = e-105, Method: Compositional matrix adjust.
Identities = 285/855 (33%), Positives = 428/855 (50%), Gaps = 143/855 (16%)
Query: 518 KKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVL 577
K +GI+ LY WQ +CL++D + ++NL+Y TS GK+ VAEILML+ L+ K A+ +L
Sbjct: 130 KIKGINTLYQWQDDCLNLDAIKNKKNLIYALPTSGGKTLVAEILMLQELMCNKKNAIFIL 189
Query: 578 PYVSICAEKA-----EHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKA 627
P+V+I EK + + LG V Y +G + P K S+ +CTIEKA
Sbjct: 190 PFVAIVQEKVSISIIQSMTPFALELGFLVEEYAATKG--TFPPKKRRKKNSIYICTIEKA 247
Query: 628 NSLVNRMLEEGRLSEIGIIVIDELHMVADQN-RGYLLELLLTKLRYAAGEGTSDSSSGEN 686
L+N ++EE RL EIGIIV+DELH++ + RG LE+LLTK+ Y
Sbjct: 248 LGLINSLIEEKRLHEIGIIVVDELHLLGENGGRGATLEVLLTKVLYVN------------ 295
Query: 687 SGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSK 746
D H I+GMSAT+ N+ +A +L A LY NFRP+ ++EY+K I+
Sbjct: 296 --------DNIH---IIGMSATIGNLEEIATFLNADLYTGNFRPIEIKEYVKCDENIWLV 344
Query: 747 KMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+ + + + DPD I L +++ E HS LIFCSSRK CE+ A
Sbjct: 345 DLKTEELLTDVKKINYRYSKDAAIIDPDRIAGLVMDIIPE-HSCLIFCSSRKNCENVALL 403
Query: 799 VSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEER 858
++K L K S+ + D + ++AL+ GL P+L +T+ GV YHH+GLT EER
Sbjct: 404 LAKVLPK-SLQDYKRDKK----QDLLNALKN-EEGLCPILHKTINFGVVYHHSGLTSEER 457
Query: 859 EVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTG 918
++E ++ G + V+ TSTLA G+NLPARRVI R P IG F++ +RY+QM GRAGR G
Sbjct: 458 RLLEDAFKSGTLCVICCTSTLATGINLPARRVILRSPYIGNQFLNLSRYKQMVGRAGRAG 517
Query: 919 IDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKN-GMTHAILEVVAGGIVQTAED 977
+ GES+LICK E++KI LL S L D++ G+ + IL + + T +
Sbjct: 518 MGNIGESILICKSNELQKITELLKSKMDDSLSTLHIDRDRGINNLILSAILFSMATTRYE 577
Query: 978 IHRYVRCTLLNST-------------------------------------KPFQDVVKSA 1000
+H+ + TLLN KP VV +
Sbjct: 578 LHKIAKRTLLNIQQKRLNVNIKQIVDETITEFLKSGVIKIKEKEKNVNILKPNISVVFPS 637
Query: 1001 QDSLRWLC-------HRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRARE 1053
QD C ++ ++ ++KL LGRAA + E + + DL +A+E
Sbjct: 638 QDISS--CPTKIETKKKRIIKLTNNSKL-ELCSLGRAAMKGCIDMECAYTLYQDLKKAQE 694
Query: 1054 GFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAH 1111
+L LHL+YL TP N+ +++P +YY+ + LS +G++E +
Sbjct: 695 HLILLDYLHLLYLVTPYNIISQIKPIGFIYYDMIINLSETQMKTARLLGINEINI----- 749
Query: 1112 GAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPV 1171
SK+RD G+ N+ RV RFYV LIL L + V
Sbjct: 750 -------SKIRD-------------GLIPKNVEP-----RVIHRFYVTLILYDLWNQHAV 784
Query: 1172 LEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLEGLIAKFQNRVSFGVRAEI 1230
++ E + ++RG+VQ L FA V FC+ L ++ + L+ F ++S+ E+
Sbjct: 785 YKIAEKYDISRGIVQNLLTAVSSFAFSVIRFCQELDEFWAFKDLLNVFSKKLSYCCPLEL 844
Query: 1231 VELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAK 1290
L +P VK SRAR LY AG +T IA+ + L E ++++ VA
Sbjct: 845 EALMDLPLVKISRARQLYNAGFKTVQIIAKTQPIQ----LQEKIPYLSKK-------VAM 893
Query: 1291 KIKNGARKIVLEKAE 1305
+I GA+ +++EK E
Sbjct: 894 QIIEGAKLLIVEKIE 908
>gi|119189641|ref|XP_001245427.1| hypothetical protein CIMG_04868 [Coccidioides immitis RS]
Length = 780
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 250/758 (32%), Positives = 386/758 (50%), Gaps = 91/758 (12%)
Query: 545 VYCASTSAGKSFVAEILMLRRLIST-GKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRS 603
VY A T GKS VA++LML+R+I K A+LVLPYV+I EK + L L+E + + + +
Sbjct: 34 VYSAPTGGGKSLVADVLMLKRIIDDPHKKAILVLPYVAIVQEKLKWLRRLVEGVDKRIDA 93
Query: 604 YYGNQGGGSLPKDTSVAVCTIEKANSL--VNRMLEEGRLSEIGIIVIDELHMVADQNRGY 661
Q GS P +I +N +EE ++ E+G++V+DELHM+ D++RGY
Sbjct: 94 LV--QVDGSYPSRAKFLQSSIRVTGFFGGINAAIEECKIDELGVVVLDELHMLDDEHRGY 151
Query: 662 LLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQA 721
L+E++++KL + +QIVGMSAT+ N +A WL A
Sbjct: 152 LIEIMISKLMLLQQD-----------------------IQIVGMSATLSNTELLAKWLHA 188
Query: 722 ALYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTILTAANLGG----------------- 762
Y + +RP+P++E++ N +Y K D +RT + G
Sbjct: 189 NYYISRYRPIPIQEFLVYDNLVYPAGKTKDFLRTAVVLNKSGATKTEALAARIIDKSVYK 248
Query: 763 --KDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFI 818
++P + +V L E G+ L+FC SR+ C A +S + S+ + +
Sbjct: 249 ELENPIINAMVSLALETAMSGYGALVFCGSRQACHMNALIISDAMPDDSMLDSDVLEKRM 308
Query: 819 DITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATST 878
D+ + + +L P GLDPV E+T+ GVA+HHAGLT EER+++ Y G+++VL AT +
Sbjct: 309 DLIAGLQSL---PCGLDPVFEKTVIKGVAFHHAGLTAEERDLIAEGYDMGILKVLVATCS 365
Query: 879 LAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIM 938
LAAG+NLPARRVI R+GRD + RQM GRAGR G D GE+ L C ++++ ++
Sbjct: 366 LAAGINLPARRVILCGARMGRDLVGPAMLRQMRGRAGRKGKDEIGETFLCCTADDLEAVL 425
Query: 939 GLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVK 998
LL+ P + S LS +K G+ A+LE VA ++ E I+ YV+C+L+ T +++
Sbjct: 426 DLLDAEMPAISSGLSPEKRGINRALLEAVATRLLSGREAINDYVKCSLIYQTMGEKELFS 485
Query: 999 SAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLA 1058
+L L L D + T LG+A S+ PE+ L V D+L RA + FV+
Sbjct: 486 LVDSTLNELVDANLLNLRFDGS-FEPTQLGQAIVASAFSPEDGLFVHDELKRALQAFVMD 544
Query: 1059 SDLHLVYLSTPIN--VEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAHGA 1113
++H+ Y+ P+ V+ DW + + E++ LD S +GV+ + MA G
Sbjct: 545 GEMHVFYMFAPLQSGTGVDIDWPTFRD---EMNKLDDSGIRALQFMGVNPGLVNSMAQG- 600
Query: 1114 PMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLE 1173
R S K D R +R Y A L L E PV
Sbjct: 601 --------RSSIK-------------------DPILARTYQRAYTAFQLRDLSNEVPVSA 633
Query: 1174 VCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVEL 1233
V + RG VQ L + FA+ + FC+R+GW L ++ ++R+ G RA+++EL
Sbjct: 634 VAHKYSTPRGNVQNLSQICHGFAAGMVKFCQRMGWEMLAVVLDHMRDRLQAGARADLLEL 693
Query: 1234 TTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
+ YVK AR L++ G +T A+AEA ++V L
Sbjct: 694 AQVTYVKSRTARLLWENGFKTLRALAEADARDLVPVLM 731
>gi|443734649|gb|ELU18559.1| hypothetical protein CAPTEDRAFT_161173 [Capitella teleta]
Length = 820
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 269/848 (31%), Positives = 431/848 (50%), Gaps = 123/848 (14%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ +++ RGI +LY WQ ECL + V Q +NL+Y TS GK+ VAE+L+ R+L+
Sbjct: 26 LPVKVLELFESLRGIKELYDWQKECLCLPEVRQGKNLIYSLPTSGGKTLVAEVLIFRQLL 85
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
A+L+LP+V+I EK + L V Y G G +P K + +
Sbjct: 86 IRKLDAILILPFVAIVQEKVRIIGAFASELDFVVEEYAA--GKGQIPPRERHKRNVLYIA 143
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQ-NRGYLLELLLTKLRYAAGEGTSDS 681
TIEK+++LVN ++E R++ +G++V+DELHM+ + +RG LE +TK+ + +
Sbjct: 144 TIEKSSALVNSLIENKRMASVGLVVVDELHMLGEGGSRGSTLETTITKVMHQSA------ 197
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN 741
G QI+GMSAT+ N+ + +L A ++ +FRPV L+EY+K+ +
Sbjct: 198 -----------------GTQIIGMSATLNNIKDLQKFLSAQVFSNDFRPVQLKEYVKLDD 240
Query: 742 AIYS---------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRK 790
IY ++ +VR I + + +DPD IV L EVV + HS L+FC ++K
Sbjct: 241 GIYEVNSSALCPEDQLQLVRAISYKCSKEMKLRDPDQIVALVQEVVPQ-HSCLVFCPTKK 299
Query: 791 GCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYH 849
CE+ A +S FL +F ++ + + + + + L + +G L VL T+P G+AYH
Sbjct: 300 NCENVAELLSCFLPRFVLDHLAPERKLL-----LKQLVQEGSGELCRVLRRTIPFGIAYH 354
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
H+GLT +ER +E Y G++ VL TSTLAAGVNLPA+RV+ R P + F+ +Y+Q
Sbjct: 355 HSGLTADERRAIEDAYSDGVLCVLACTSTLAAGVNLPAKRVVLRSPYVADTFLSRNQYKQ 414
Query: 910 MAGRAGRTGIDTKGESMLICKPEEVKKIMGLL---NESCPPLHSCLSEDKNGMTHAILEV 966
M GRAGR GID+ GES+LI + ++ K+ +L NE C S L E G+ +L
Sbjct: 415 MVGRAGRAGIDSSGESVLILQRKDKVKLANMLIGPNEQC--CSSLLYESHKGLRSLLLST 472
Query: 967 VAGGIVQTAEDIHRYVRCTL--LNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYST 1024
+ I + + + +++ TL + ++ D++++A+++L+ L H L + T
Sbjct: 473 IGLKITASTQSVKAFIQRTLCFIQRSQLKVDLLQNAENALQRL-HEMGLITQKTPDSLET 531
Query: 1025 TPLGRAAFGSSLCPEESLI---------------------VLDDLSRAREGFVLASDLHL 1063
T LG+A F C E + + DL R E VL++ LHL
Sbjct: 532 TRLGQAVFKGK-CSVEYFLYGRHPGACWVAGGVDIEFGSQLYSDLKRGLESLVLSNHLHL 590
Query: 1064 VYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKL 1121
++L TP + P+W +Y + + V + +G+SE Y++ A A R +
Sbjct: 591 IFLVTPYDRLNAFTPNWNVYMDMMYSFDENELRVASMIGISEGYIVNKA--ACQRTRKNV 648
Query: 1122 RDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVA 1181
++ V +RFY +LIL L Q+ + +V F V
Sbjct: 649 NEA---------------------------VVRRFYASLILYELWQQKSIWDVSRKFSVP 681
Query: 1182 RGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVK 1240
RG +Q L +A FAS V FC+ L + + L+A F R+S+ V AE++ L IP VK
Sbjct: 682 RGQIQQLLTSAASFASCVLHFCQELEELWSYQELLAVFVKRLSYCVTAELIPLVEIPGVK 741
Query: 1241 GSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIV 1300
+RA+ L++ G +T IA +V + S AK+I A+ ++
Sbjct: 742 IARAKQLFQGGFKTLQQIASTEPHALVNCVEHLSH-----------KAAKQIIISAQVLL 790
Query: 1301 LEKAEEAR 1308
E+AE R
Sbjct: 791 TERAEALR 798
>gi|432953220|ref|XP_004085307.1| PREDICTED: helicase POLQ-like, partial [Oryzias latipes]
Length = 932
Score = 389 bits (999), Expect = e-104, Method: Compositional matrix adjust.
Identities = 289/841 (34%), Positives = 444/841 (52%), Gaps = 98/841 (11%)
Query: 475 TNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSW--LPSEICSI-YKKRGISKLYPWQVE 531
T V+KK V +E+ A S + DL + LPS++ + ++ RGI KLY WQ
Sbjct: 156 TAVLKKAVVSEEISVAMQAMES-ISSQTTDLGPFFGLPSKVKELMHRLRGIQKLYDWQEA 214
Query: 532 CLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLE 591
CL++D V QRRNL+Y TS GK+ VAEIL+LR L+ K LLVLPY+S+ EK L
Sbjct: 215 CLNLDCVQQRRNLIYSLPTSGGKTLVAEILILRELLCRRKDCLLVLPYISLVQEKVRGLA 274
Query: 592 VLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSLVNRMLEEGRLSEIGII 646
L L V Y G++G P TS+ V TIEKA+SLVN ++E GRL +G++
Sbjct: 275 SLGLELDFLVEEYAGSRG--RFPPVRRRNRTSLYVATIEKAHSLVNSLIETGRLENLGLL 332
Query: 647 VIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMS 706
V+DELHM+ + +RG ++E+ + K+++ + +N+ Q++GMS
Sbjct: 333 VVDELHMLGEGSRGAVMEMTVAKVQHLS----------KNT-------------QVIGMS 369
Query: 707 ATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSK--------KMDVVRTILTAA 758
AT+ N+ + +L+A LY ++FRPV L+E++KV ++IY + + ++
Sbjct: 370 ATLGNIQDLQAFLRAELYSSDFRPVQLKEFVKVNDSIYEVDPTQESGFRFSRLLPFKYSS 429
Query: 759 NLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLK-KFSINVHSSDSEF 817
++ DPDHI+ L EV+ HS LIFC ++K CE+ A + K+LK F + + S
Sbjct: 430 SMQKTDPDHIIALVTEVI-PAHSCLIFCPTKKNCENVAAMICKYLKGDFLRHREAEKSRL 488
Query: 818 IDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATS 877
+ CP VL T+P GVAYHH+GLT EER ++E + G++ +L TS
Sbjct: 489 LQDLQDGGGGSMCP-----VLRRTVPYGVAYHHSGLTTEERRLLEEAFSHGVLCLLGCTS 543
Query: 878 TLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKI 937
TLAAG+NLPARRVI R P + +F+ T+Y+QM GRAGR G+D+ GES+LI + ++
Sbjct: 544 TLAAGINLPARRVILRSPYVATEFLKRTQYKQMVGRAGRAGMDSVGESVLILQEKDRSAA 603
Query: 938 MGLLNESCPPLHSC----LSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPF 993
LL C P+ +C L ED G+ IL ++ + + + + +++ TLL +
Sbjct: 604 KVLL---CSPMENCYSRLLEEDAKGLLTLILSLIGLNVAASLQQLQDFLQGTLLCVQQRR 660
Query: 994 QDVVKSAQDS----LRWLCHRKFL-EWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDL 1048
QD+ + LC + + + T LGRAA+ + ++ DL
Sbjct: 661 LCTDGGLQDAVLRCIHTLCSKDLITAADPHAATLQVTRLGRAAYKGGVDLTFCHLLYKDL 720
Query: 1049 SRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYL 1106
S EG +L+S LHL+YL TP + + P+W +Y +F LSA +Q + +GV E ++
Sbjct: 721 SAGLEGLLLSSFLHLLYLVTPYELVPQCSPNWMIYLRQFTSLSAAEQKMSAAIGVPESFV 780
Query: 1107 MRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLV 1166
R A G ++ KG+ AQ +R Y+AL+L L+
Sbjct: 781 ARKAAGQTVK---------KGVDA----------------AQA----QRLYLALVLLCLL 811
Query: 1167 QETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFG 1225
+ET V V E F+++RG VQ L +A F S F E L + L+A R+++
Sbjct: 812 KETSVWGVAERFQLSRGFVQTLLSSAAAFCSCALHFAEELEELWPFRSLLAALTQRLTYC 871
Query: 1226 VRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEAS---ISEIVKALF--ESSSWIAEA 1280
V+AE+V L + V LY AG RT +A A +S V+ L+ +++ +A A
Sbjct: 872 VKAELVPLMEVAGVMEXXXXXLYSAGYRTLTHLANADPAVLSRTVENLYTKQAAMMVASA 931
Query: 1281 Q 1281
+
Sbjct: 932 K 932
>gi|307107102|gb|EFN55346.1| hypothetical protein CHLNCDRAFT_134358 [Chlorella variabilis]
Length = 2164
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 285/832 (34%), Positives = 410/832 (49%), Gaps = 137/832 (16%)
Query: 503 LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEIL 561
L L W LP + ++ RG+ +YPWQ L NLVYCA TS GKS VAE+L
Sbjct: 244 LKLEEWALPPGVVQAFEARGVRSMYPWQAAALECGEAYN--NLVYCAPTSGGKSLVAEVL 301
Query: 562 MLRRLISTGK-------------MALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQ 608
M+RRL+++ + AL+VLPYVSI EK+EHL+ +L P+ V+ +YG +
Sbjct: 302 MVRRLLASVRHIPQPRRSKPKYGRALVVLPYVSIVCEKSEHLQAVLRPMHAAVKGFYGGE 361
Query: 609 GGGSL-PKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLL 667
G +L P+ +VAVCTIEKAN +N++ +EGRL E+ +V+DELHMV+D +RG LE+ L
Sbjct: 362 EGQALGPRGETVAVCTIEKANVAINKLAQEGRLGELCCVVVDELHMVSDGDRGVGLEMSL 421
Query: 668 TKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETN 727
+KL ++ + +QI+GMSATM + ++ WL+A L+ TN
Sbjct: 422 SKLLFSPH---------------------SRHVQIIGMSATMGGLESLRAWLRAELFLTN 460
Query: 728 FRPVPLEEYIKVGNAIYSKKMDV----------VRTILTAANLGGKDPDHIVELCDEVVQ 777
FRPVPL E+ +Y K+++ +R + A + +D D +V L E
Sbjct: 461 FRPVPLTEHAVFRGKVYQKELEALEEGHPPLQELREV--APSDSRRDADRLVPLVAEATA 518
Query: 778 EGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG--LD 835
EGHSVL+FCSSR+ CES A ++ L + + +E + + I A + G +
Sbjct: 519 EGHSVLVFCSSRRQCESAAALIADLLPQVAPPPAERQAELGEQRAGIVADIKIAMGGAMG 578
Query: 836 PVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFR-- 893
LE+ + G+A+HHAGLT EER VE YR V V+TATSTLAAGVNLPARRVI R
Sbjct: 579 AELEKCMLRGIAWHHAGLTSEERAGVERAYRCSAVSVITATSTLAAGVNLPARRVILRSL 638
Query: 894 -QPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICK----PEEVKKIMGLLNESCPPL 948
Q +G + ++Y QM GRAGR G GES LI K +E ++ LL P L
Sbjct: 639 HQASLGIGPVSRSQYLQMVGRAGRAGHSAVGESFLIGKGAANSQEWHQVCALLTAPVPSL 698
Query: 949 HSCL------------------SEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNST 990
S + +D + +LE +A G V+ D+ R L
Sbjct: 699 QSRVLSAEAASTITSKGAAALGDKDTQHLQQLLLEGIANGTVRDGGDVGRLG----LAVM 754
Query: 991 KPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSR 1050
+P V +LR L K LE T GRA + S+L ++++ + + +
Sbjct: 755 RPASKV------ALRALLDGKRLEGQH----LELTHKGRAVYDSALPLDDAMQLYESCTA 804
Query: 1051 AREGFVLASDLHLVY---LSTPINVEVEPDWELYYERFLE-LSALDQSVGNQVGVSEPYL 1106
A GF+L L LVY L P + +W R L+ L +Q + VGV L
Sbjct: 805 ADNGFMLDRPLVLVYHCLLGHPFQIISWAEW----GRLLQGLDKHEQQIAESVGV----L 856
Query: 1107 MRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLV 1166
AH A + A+ R AL LS L
Sbjct: 857 PMHAHAA--------------------------QSGRAPSAEVHARHARMAAALALSELT 890
Query: 1167 QETPVLEVC-----ETF---KVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKF 1218
QE + V E F ++RG +Q LQ++AG++ M ++ CE GW+ L L +
Sbjct: 891 QEKDIHAVVLKWGREGFVSRGLSRGQIQKLQQDAGKWMGMAALLCESAGWWPLATLYSNL 950
Query: 1219 QNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
+ GVR +++ L IP + ++ARAL+KAGLR +A A + +AL
Sbjct: 951 SQMAAAGVRQDLLPLMRIPDMDAAKARALFKAGLRDAQMLATADEQAVARAL 1002
>gi|408388335|gb|EKJ68021.1| hypothetical protein FPSE_11832 [Fusarium pseudograminearum CS3096]
Length = 904
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 277/844 (32%), Positives = 421/844 (49%), Gaps = 136/844 (16%)
Query: 490 AGTPSSSGMLKDC-LDLS--SW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNL 544
A TP+SS +D LDLS S+ LP ++ + GI ++YPWQ CL G+L +NL
Sbjct: 92 AATPTSS---RDPELDLSHPSYDLPRQMVDNFASLGIKQIYPWQKACLKGPGLLTGEKNL 148
Query: 545 VYCASTSAGKSFVAEILMLRRLIS-TGKMALLVLPYVSICAEKAEHLEVLLEPL------ 597
VYCA T GKS VA++LML+R++ G ALLVLPYV++ EK L +++ L
Sbjct: 149 VYCAPTGGGKSLVADVLMLKRILQEKGTKALLVLPYVALVQEKVRWLRNVVQGLRFAPET 208
Query: 598 -------------GRHVRSYYGNQGGGSLPK---DTSVAVCTIEKANSLVNRMLEEGRLS 641
+ G GGG + D + VCT+EKAN+LVN +++ +S
Sbjct: 209 AIDDDKRIWRRRADENAVRVVGFFGGGKVRATWADFDIGVCTLEKANALVNTAIDDCSIS 268
Query: 642 EIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQ 701
++ +V+DELHM+ D +RGYLLEL+ TKL S E S +Q
Sbjct: 269 KLRAVVLDELHMIDDDHRGYLLELMATKL-----------LSLEQS------------VQ 305
Query: 702 IVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLG 761
IVGMSAT+PN+ +A WL YET +RPVP+EE++ IY I TAA L
Sbjct: 306 IVGMSATLPNMDMMAKWLGGHCYETRYRPVPIEEHLVYDGNIYPAG-STSSLIKTAAQLN 364
Query: 762 GK-----------------------DP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
+ DP + +V L E G L+F SR CES A
Sbjct: 365 SRTTQTQAQTKPIRRIEPSTHKELRDPVLNAVVTLACETAVAGFGALVFAGSRGMCESDA 424
Query: 797 RHVSKFL---KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGL 853
R +S+ + + I+V + + LR GLDPVLEET+ GVA+H
Sbjct: 425 RWISRAMPAPHELRIDVVDRRMDLLG------ELRSLNTGLDPVLEETVLYGVAFHRKRN 478
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
++ + + + R L A + PARRVI R+GRDF+ + RQM GR
Sbjct: 479 SLLTVSKFKANHNRPEERDLVAAA--------PARRVILHNCRMGRDFVGPSMLRQMRGR 530
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQ 973
AGR G GE+ L C+ ++++++ L+N PP+ SCLS + +VV+ +
Sbjct: 531 AGRQGKAPIGETYLCCRENDLEQVVELMNAELPPVASCLSTENR-------QVVSIRLAT 583
Query: 974 TAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFG 1033
+ E I Y +LL+ T Q V KS SL + F+ + +++ T LG+A
Sbjct: 584 SHEAISDYFSKSLLSHTHDSQFVKKSITSSLEEIESMGFIT-QDSLSMFTATQLGKAIVA 642
Query: 1034 SSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE-VEPDWELYYERFLELSALD 1092
S++ P++ + V D+LSRA + FV+ ++H++Y TP+ V +W+++ E+ LD
Sbjct: 643 SAIDPDDGVFVHDELSRALQAFVMDGEMHVLYTFTPVQESGVMVNWQVFRN---EMERLD 699
Query: 1093 QS---VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQT 1149
+S V +G+ ++++A GA LR++T+ + Q
Sbjct: 700 ESGLRVLRLLGIKPTTILKLAQGA------TLRETTQ------------------EEKQI 735
Query: 1150 LRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWY 1209
RV +RFY+AL L L E P+ V + V RGMVQ L + FA+ + FCE++ W
Sbjct: 736 ARVHRRFYLALQLRDLCNEVPIHIVARKYDVPRGMVQNLSQTCQGFAAGMIKFCEQMSWG 795
Query: 1210 DLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKA 1269
+ + F +R+ G RA+++ L IP++K AR ++ G RT IA A +E++
Sbjct: 796 VMAAALDHFSDRLVAGARADLLALAKIPFIKSRTARVFWENGFRTVATIANADPTELLPV 855
Query: 1270 LFES 1273
L ++
Sbjct: 856 LMQA 859
>gi|359066602|ref|XP_002688448.2| PREDICTED: LOW QUALITY PROTEIN: helicase, POLQ-like [Bos taurus]
Length = 1087
Score = 385 bits (989), Expect = e-103, Method: Compositional matrix adjust.
Identities = 278/847 (32%), Positives = 429/847 (50%), Gaps = 129/847 (15%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 293 LPSKVRDLYVQFKGIEKLYEWQHTCLTLKSVQERKNLIYSLPTSGGKTLVAEILMLQELL 352
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ L++LPYV+I EK L LG V Y G++ G P + S+ +
Sbjct: 353 CRRRDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSK--GKFPPIKRREKKSLYIA 410
Query: 623 TIEKANSLVNRMLEEGRLSEIG-------IIVIDELHMVADQNRGYLLELLLTKLRYAAG 675
TIEK +SLVN ++E GR S +G +I +LHM+ + RG +LE+ L K+ Y
Sbjct: 411 TIEKGHSLVNSLIETGRNSSLGLLFTFILFFLISKLHMIGEGTRGAILEMTLAKILY--- 467
Query: 676 EGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVP--- 732
TS ++ QI+GMSAT+ NV + +LQA Y + FRPV
Sbjct: 468 --TSKTT------------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVCTXG 507
Query: 733 -------LEEYIKVGNAIYSKK------MDVVRTI--LTAANLGGKDPDHIVELCDEVVQ 777
L I V N +Y M R + + L DPDH+V L EV+
Sbjct: 508 LICYLSFLLHIIFVANVLYKNSENDEGGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVI- 566
Query: 778 EGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDP 836
+S L+FC ++K CE+ A + K L K + + + I L+ G L
Sbjct: 567 PSYSCLVFCPTKKNCENVAEMICKSLSKEYLKHKEKEKQ-----EVIQNLKNVSGGNLCR 621
Query: 837 VLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPR 896
VL T+P GVAYHH+GLT +ER+++E Y G++ + T TSTLAAGVNLPARR+ +
Sbjct: 622 VLRHTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRLAAFPLQ 681
Query: 897 IGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS--- 953
R+ +Y+QM GRAG GID+ GES+LI + ++ ++++ L+++ PL +C S
Sbjct: 682 KLRN-----QYKQMIGRAGLAGIDSAGESILILQEKDKQQVLQLISK---PLENCYSHLV 733
Query: 954 -EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLC 1008
E G+ L ++ I +DI+R++ T + KS +SLR+L
Sbjct: 734 QEFTKGIQTLFLSLIGLKIATNLDDIYRFMSGTFFGVQQKVLLKEKSLWEITMESLRYLT 793
Query: 1009 HRKFLEWN-------EDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDL 1061
+ L+ + E + T LGRA+F ++ I+ DL + EG +L S L
Sbjct: 794 EKGLLQKDTMCGSKEEFQNNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLMLESLL 853
Query: 1062 HLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISS 1119
HL+YL+TP ++ + +PDW +Y+ +F +LS +Q+V VGVSE ++ + A G +R
Sbjct: 854 HLIYLTTPYDMASQCDPDWMIYFRQFNQLSPAEQNVAALVGVSENFIGKKASGQAIR--- 910
Query: 1120 KLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFK 1179
K D + R Y++ IL L++ET + V E F
Sbjct: 911 KKVDKN--------------------------IVNRLYLSFILYTLLKETNIWSVSEKFN 944
Query: 1180 VARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPY 1238
+ RG +Q+L A F+S V FCE L ++ L+ + ++++ V+AE++ L +
Sbjct: 945 MPRGYIQSLLSAAAAFSSCVLHFCEELEEFWVYRALLGELTKKLTYCVKAELIPLMEVTG 1004
Query: 1239 VKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARK 1298
V RAR LY AG ++ +A A+ +++ I RR AK+I + A+
Sbjct: 1005 VLEGRARQLYNAGYKSLTHLANANPEVLIRT-------IDHLSRR----QAKQIVSSAKM 1053
Query: 1299 IVLEKAE 1305
++ EKAE
Sbjct: 1054 LLHEKAE 1060
>gi|296486374|tpg|DAA28487.1| TPA: helicase, POLQ-like [Bos taurus]
Length = 1137
Score = 385 bits (989), Expect = e-103, Method: Compositional matrix adjust.
Identities = 278/847 (32%), Positives = 429/847 (50%), Gaps = 129/847 (15%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 343 LPSKVRDLYVQFKGIEKLYEWQHTCLTLKSVQERKNLIYSLPTSGGKTLVAEILMLQELL 402
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ L++LPYV+I EK L LG V Y G++ G P + S+ +
Sbjct: 403 CRRRDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSK--GKFPPIKRREKKSLYIA 460
Query: 623 TIEKANSLVNRMLEEGRLSEIG-------IIVIDELHMVADQNRGYLLELLLTKLRYAAG 675
TIEK +SLVN ++E GR S +G +I +LHM+ + RG +LE+ L K+ Y
Sbjct: 461 TIEKGHSLVNSLIETGRNSSLGLLFTFILFFLISKLHMIGEGTRGAILEMTLAKILY--- 517
Query: 676 EGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVP--- 732
TS ++ QI+GMSAT+ NV + +LQA Y + FRPV
Sbjct: 518 --TSKTT------------------QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVCTXG 557
Query: 733 -------LEEYIKVGNAIYSKK------MDVVRTI--LTAANLGGKDPDHIVELCDEVVQ 777
L I V N +Y M R + + L DPDH+V L EV+
Sbjct: 558 LICYLSFLLHIIFVANVLYKNSENDEGGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVI- 616
Query: 778 EGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDP 836
+S L+FC ++K CE+ A + K L K + + + I L+ G L
Sbjct: 617 PSYSCLVFCPTKKNCENVAEMICKSLSKEYLKHKEKEKQ-----EVIQNLKNVSGGNLCR 671
Query: 837 VLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPR 896
VL T+P GVAYHH+GLT +ER+++E Y G++ + T TSTLAAGVNLPARR+ +
Sbjct: 672 VLRHTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRLAAFPLQ 731
Query: 897 IGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS--- 953
R+ +Y+QM GRAG GID+ GES+LI + ++ ++++ L+++ PL +C S
Sbjct: 732 KLRN-----QYKQMIGRAGLAGIDSAGESILILQEKDKQQVLQLISK---PLENCYSHLV 783
Query: 954 -EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLC 1008
E G+ L ++ I +DI+R++ T + KS +SLR+L
Sbjct: 784 QEFTKGIQTLFLSLIGLKIATNLDDIYRFMSGTFFGVQQKVLLKEKSLWEITMESLRYLT 843
Query: 1009 HRKFLEWN-------EDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDL 1061
+ L+ + E + T LGRA+F ++ I+ DL + EG +L S L
Sbjct: 844 EKGLLQKDTMCGSKEEFQNNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLMLESLL 903
Query: 1062 HLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISS 1119
HL+YL+TP ++ + +PDW +Y+ +F +LS +Q+V VGVSE ++ + A G +R
Sbjct: 904 HLIYLTTPYDMASQCDPDWMIYFRQFNQLSPAEQNVAALVGVSENFIGKKASGQAIR--- 960
Query: 1120 KLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFK 1179
K D + R Y++ IL L++ET + V E F
Sbjct: 961 KKVDKN--------------------------IVNRLYLSFILYTLLKETNIWSVSEKFN 994
Query: 1180 VARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPY 1238
+ RG +Q+L A F+S V FCE L ++ L+ + ++++ V+AE++ L +
Sbjct: 995 MPRGYIQSLLSAAAAFSSCVLHFCEELEEFWVYRALLGELTKKLTYCVKAELIPLMEVTG 1054
Query: 1239 VKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARK 1298
V RAR LY AG ++ +A A+ +++ I RR AK+I + A+
Sbjct: 1055 VLEGRARQLYNAGYKSLTHLANANPEVLIRT-------IDHLSRR----QAKQIVSSAKM 1103
Query: 1299 IVLEKAE 1305
++ EKAE
Sbjct: 1104 LLHEKAE 1110
>gi|242022123|ref|XP_002431491.1| DNA polymerase theta, putative [Pediculus humanus corporis]
gi|212516779|gb|EEB18753.1| DNA polymerase theta, putative [Pediculus humanus corporis]
Length = 1051
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 281/862 (32%), Positives = 443/862 (51%), Gaps = 129/862 (14%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + +Y++ + I +LY WQ ECL+++ V +NLVY TS GK+ VAEIL+LR ++
Sbjct: 260 LPLAVKKLYEEHKDIKELYSWQEECLNLESVKNHQNLVYALPTSGGKTLVAEILILREIL 319
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ L +LPYVSI EK + LG V Y G G +P + SV +
Sbjct: 320 CYKRNVLFILPYVSIVQEKVKDFSQFAIDLGFLVEEYAA--GKGVIPPIKRRRRKSVIIA 377
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
T+EKA +VN ++E RL E G+IV+DELHM+A++ RG +LE LLT++ Y +
Sbjct: 378 TMEKALVVVNSLIEARRLHEFGLIVVDELHMLAEEGRGAILETLLTQVIYNRDK------ 431
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
+QI+GM+AT+ N+ V +L+A Y NFRPV L EYIK
Sbjct: 432 -----------------IQIIGMTATIGNLEEVGKFLKAECYVGNFRPVSLNEYIKCDRK 474
Query: 743 IYSKKMDVVRTILTAANLG----GKDPDHIVELCDEVVQEGHSVLIFCSSRK---GCEST 795
IYS + + L G DPD I +L EV+ + S LIFC S+K C
Sbjct: 475 IYSIDWNSENGVKECRKLPLSAEGTDPDGISDLVQEVIPD-DSCLIFCPSKKIVKRCFFL 533
Query: 796 ARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTV 855
+R + + L K I S + + S + + CP VL++TLP GVAYHH+GLT
Sbjct: 534 SRILPRDLMK--IKEQQKKSLYRALVSESND-QICP-----VLKKTLPFGVAYHHSGLTA 585
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
ER+++E +R G + V+ TSTLA GVNLPA+RVI R P +G+DFI +RY+QM GRAG
Sbjct: 586 GERKLLEESFRDGTLSVICCTSTLAVGVNLPAKRVILRSPYVGKDFISLSRYKQMVGRAG 645
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSE-DKNGMTHAILEVVAGGIVQT 974
R+G +GES L+C+ +++K+ LL P+ S+ D + +L + G T
Sbjct: 646 RSGYGAEGESFLMCQITDLEKVKSLLKS---PMDQTTSKIDLENCKNLVLSSIGLGTATT 702
Query: 975 AEDIHRYVRCTLLN--------STKPFQDVVKSA---QDSLRW----LCHRKFLEWNEDT 1019
+ + ++C+LL+ TK D S+ Q +L+ L K +E N +
Sbjct: 703 RKSLRELLKCSLLHVQANKLNVDTKKMTDSCISSLYKQGALKIKSIELDEDKDVEGNSIS 762
Query: 1020 KL-------------------YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD 1060
KL + + LGRAA L +++ + DL +A+ VL ++
Sbjct: 763 KLDLNNATNTKKSLKISNDSPLTISRLGRAAMKGGLSLDKAHELYGDLVKAQSSLVLLTN 822
Query: 1061 LHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRIS 1118
LHL+YL TP ++ +++P++ +Y+ ++EL+A + N +GV+E + ++A
Sbjct: 823 LHLLYLVTPPDIIAQIKPNFSVYFNVYMELNANEVHTANIIGVTEFAMSKLAM------- 875
Query: 1119 SKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETF 1178
G+H K A V RFY++L+L++L ++ V +V F
Sbjct: 876 --------GIHPK---------------AIPEIVINRFYISLMLNKLWKQHTVWDVASLF 912
Query: 1179 KVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIP 1237
++ RG +Q L +A +A+ V FCE+L ++ + L+ F R++ E++ L +P
Sbjct: 913 ELPRGQIQTLMTSAATYANSVLRFCEKLEKFWSFKSLLTDFAPRLAHCCSTELLPLMELP 972
Query: 1238 YVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGAR 1297
VK RA+ LY+ G +T +A A ++V+++ + L VA +I A+
Sbjct: 973 AVKRGRAKQLYEGGFKTLQILANAKAGDLVRSI-----------DHLSLKVASQIIAAAK 1021
Query: 1298 KIVLEKAEEARIAAFSAFKSLG 1319
+++EKAE + A + L
Sbjct: 1022 LLLMEKAENLKEEAEDVLEGLA 1043
>gi|358377966|gb|EHK15649.1| hypothetical protein TRIVIDRAFT_185105 [Trichoderma virens Gv29-8]
Length = 1015
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 254/840 (30%), Positives = 413/840 (49%), Gaps = 135/840 (16%)
Query: 490 AGTPSSSGMLKDCLDLSSW---LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLV 545
A TPSSS + LDL+ LP ++ + + GI ++YPWQ CL G+L +NLV
Sbjct: 89 AATPSSS--IDPELDLAHPVYNLPPQLINNFASLGIKQIYPWQKNCLKGPGLLTGAKNLV 146
Query: 546 YCASTSAGKSFVAEILMLRRLISTGKM-ALLVLPYVSICAEKAEHLEVLLEPLGRH---- 600
YCA T GKS VA++LML+R++ + ALL+LPYV++ EK L +++ L +
Sbjct: 147 YCAPTGGGKSLVADLLMLKRIMEEPETKALLILPYVALVQEKVRWLRTVVQGLTANLDPE 206
Query: 601 ---------------------VRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGR 639
V ++G S +D + +CT+EKAN L+N +E+
Sbjct: 207 ALEKQKASSIWRLRPDHDSIKVVGFFGGGKIRSTWQDFDIGICTLEKANMLINTAIEDSS 266
Query: 640 LSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHG 699
+S++ +V+DELHM+ D +RGYLLEL+ TKL
Sbjct: 267 ISQLRAVVLDELHMIDDDHRGYLLELIATKL-----------------------LSLEQP 303
Query: 700 LQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY--------------- 744
+QI+GMSAT+PN VA WL A YET +RP+P+EE++ +Y
Sbjct: 304 IQIIGMSATLPNANLVAKWLNAHSYETRYRPIPIEEHLVCEGKVYHIGSNGATTQKQLKV 363
Query: 745 ----SKKMDVVRTILTAANLGGKDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
++D +R I +++ +DP + +V L E G+ L+F SR CES AR
Sbjct: 364 DEISKGQVDPIRQIEMSSHKEFRDPVLNAVVSLAHETALMGYGALVFAGSRGICESDARL 423
Query: 799 VSKFLKKFSINVHSSDSEFIDI-TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEE 857
+S+ + + H DS +D + LR G DPVLEET+ SGVA+H
Sbjct: 424 ISRVMPQ----PHELDSRTMDKRMDLLSELRSLSTGADPVLEETVLSGVAFHRKS----- 474
Query: 858 REVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRT 917
+ + + L+ PARRVI R+GRDF+ + RQM GRAGR
Sbjct: 475 -----SLFHRDLI------------AEAPARRVILHNARMGRDFVGPSMLRQMRGRAGRQ 517
Query: 918 GIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAED 977
G GE+ L C+ +++++++ L+ P + SCL+ + + AILEV++ + + E
Sbjct: 518 GKSPIGETYLCCRQDDLEQVLDLMYADIPEIASCLNTENKRVQRAILEVISVRLANSQES 577
Query: 978 IHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLC 1037
+ Y +L++ T + V L + H L N+ ++ T LG+A SS+
Sbjct: 578 LLEYFSNSLISYTHDREFVENCLTSGLEEI-HDLGLIVNDSYSSFAATQLGKAIVASSVD 636
Query: 1038 PEESLIVLDDLSRAREGFVLASDLHLVYLSTPI-NVEVEPDWELYYERFLELSALDQS-- 1094
P + + + +L++ + FV+ ++H++Y+ TP+ + + +W+++ E+ ALD+S
Sbjct: 637 PYDGVFIHSELTKTLKAFVMDGEMHILYVFTPVQDFGIVVNWQVFRN---EMDALDESGL 693
Query: 1095 -VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVC 1153
V +G+ +++ A G P++ S+ + + RV
Sbjct: 694 RVLGFLGIKPTAVLKFAQGVPLKESTP------------------------EEKELARVY 729
Query: 1154 KRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEG 1213
+RFY+A+ L L E P+ V + RG VQ L + FA+ + FCE +GW +
Sbjct: 730 RRFYLAMQLRDLCNEMPIHVVARKYDSPRGSVQTLAQTCQGFAAGMIKFCEHMGWGVMAA 789
Query: 1214 LIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFES 1273
+ F +R+ G R +++EL IP++K AR ++ G RT AIA A E+V L ++
Sbjct: 790 ALEHFSDRLMAGARTDLLELAKIPFIKSRTARVFWENGYRTVGAIANADPKELVLILMQA 849
>gi|290998603|ref|XP_002681870.1| predicted protein [Naegleria gruberi]
gi|284095495|gb|EFC49126.1| predicted protein [Naegleria gruberi]
Length = 1648
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 257/817 (31%), Positives = 418/817 (51%), Gaps = 71/817 (8%)
Query: 499 LKDCLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQR-RNLVYCASTSAGKSFV 557
+ D L ++P +I YK + LYPWQV L + +L +N++Y + TS GK+ V
Sbjct: 166 MNDPTSLYHYIPYQIADNYKHKS---LYPWQVALLENNQILDGGKNIIYSSPTSGGKTLV 222
Query: 558 AEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGN-----QGGGS 612
+EI+M+RRL + +LP+ +I EK L + +G Y+
Sbjct: 223 SEIIMVRRLTRNKSKVVFMLPFKAIIEEKVADLNEKFKNVGWKANPYHSEAVKLIDTASF 282
Query: 613 LPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRY 672
D V VCT E+ NS++N ++ G++ EIG I+IDELH + + +RGY+LEL+LTK+ Y
Sbjct: 283 NDDDERVMVCTFERGNSILNGLIRTGKIDEIGTIIIDELHSITEPDRGYILELILTKIIY 342
Query: 673 AAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVP 732
+ +QI+ MSAT+PNV +A +L A L+ T++RPVP
Sbjct: 343 LKPK-----------------------IQIIAMSATLPNVDKLASFLNAYLFVTDYRPVP 379
Query: 733 LEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGC 792
L EY+ + ++ ++VR LT + K PD ++ + +IFCSS+ C
Sbjct: 380 LSEYMVHDSKVFDTNCNLVRN-LTPYTVSKKLPDGFNISILSLIDTEFATIIFCSSKLKC 438
Query: 793 ESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAG 852
+ A+ +++ + I H + L+ GLDP L ++ GV +HH+
Sbjct: 439 KLFAKFIAEENQPQHIPEHLVQQR----QELLTNLKLSTTGLDPDLNFSMGRGVGFHHSS 494
Query: 853 LTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAG 912
LT+EE+++VE +R G++++L T+TLA GVNLPARRVI +GRD + Y+Q AG
Sbjct: 495 LTMEEKKLVELAFRNGMIKILLCTTTLATGVNLPARRVIISSLTMGRDDLSIVNYKQAAG 554
Query: 913 RAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIV 972
RAGR GID KGES LI E LL+ P+ SCL+E ++ A+LE ++ GI+
Sbjct: 555 RAGRAGIDVKGESYLIVPSLESGS--KLLSSKFTPMKSCLNE--KHISRALLENISTGII 610
Query: 973 QTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAF 1032
+TA DI Y++CT L+ P +++ +S +L F+ W + PLG A
Sbjct: 611 RTAHDIVSYLKCTFLSKCIPEKELRSIGINSKVFLEKNGFIRWINGKDSFDCKPLGFATQ 670
Query: 1033 GSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLE-LSAL 1091
+++CP SL + + F L DL ++Y+ + + L++ + + S +
Sbjct: 671 IANICPYLSLKFYQTIKNELKNFYLEDDLGMIYILASFS-----ENSLFHTDYNDTFSKV 725
Query: 1092 DQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLR 1151
+ + N + + +++K+RD + L G + +G S++ ++T+
Sbjct: 726 AEKIVN-IAIKRREFSEF-------VNNKIRDINE-LRGYI-LSVGNRSSHQRELSETIY 775
Query: 1152 VCKRFYVALILSRLVQETPVLEVCETF---KVARGMVQALQENAGRFASMVSVFCER--L 1206
++ IL ++ E P+ + ET+ ARG VQ +Q++A AS++S FC+ L
Sbjct: 776 TLRK---TFILYDIILEYPIKNIAETYFGDSDARGSVQNVQKDAASKASVLSSFCKYAAL 832
Query: 1207 GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEI 1266
+ E + + R+ GVR E+V L IP+V SRAR L+ AGLRT +A+ + I
Sbjct: 833 PSFFSEAF-KEIKERLVSGVRQELVPLVQIPFVGSSRARLLFSAGLRTIAQVADETPESI 891
Query: 1267 VKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEK 1303
L + S E++ + L I GA+ IV EK
Sbjct: 892 ENILVKGSQNTTESRTKANL-----IVEGAKAIVEEK 923
Score = 181 bits (458), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 174/708 (24%), Positives = 313/708 (44%), Gaps = 103/708 (14%)
Query: 1498 FDCFLDRWEATHEFYFDIHYDKHSEANSGVLF-------EIHGLAVCWENSPVYYVNLPK 1550
FD FL+RW + F F + + ++ F + GL++C+ Y+ K
Sbjct: 983 FDEFLERWNNSKVFSFCFEFGIKKKQDNPTTFIKNRDVYTVKGLSICFNEVFEDYLTFEK 1042
Query: 1551 DLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQ 1610
+ D N+ + + + R K + +++ + K T+ K Q
Sbjct: 1043 RCET------------KIDPNIPCKCYFIHLDDYRSKIVKRMLQDKRKPKLTFGFKKQQT 1090
Query: 1611 VLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSS 1670
L A ++ PV +D I W+ PDD +
Sbjct: 1091 RLLQAW-----------------------DLIVKDPV-----LDPMIGDWVQHPDDS-DN 1121
Query: 1671 NPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEE 1730
LE+ K S++ ++ ++ + +Q + + + +++ E
Sbjct: 1122 EKTLEEIYLKYFPSDSFLFTPKNDKF----------VIVKTASQCWPIMTAVMVSIINLE 1171
Query: 1731 LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
L + E+ VL+ ME GI + L+ KL + + +L +
Sbjct: 1172 L-RQMFEFEMSFSKVLSTMEHNGIRFNYHWIKHNTKLIDAKLDEITRDLNSLQILDGK-- 1228
Query: 1791 TAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP----IVPVIKEHRTLAK 1846
D++N H+ L + + T+K L+ L+ +P I+ I E+R L
Sbjct: 1229 -KIDVSN--NDHVALLLFDKLKLKGTERKTNKEILEKLKKLYPDKSYIMKQISEYRYLLN 1285
Query: 1847 LLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNED 1906
+ + ++ + + TQ+Y + +QT++ATGRLS++ PNLQ + + ++ K D
Sbjct: 1286 IKTHHIQNMPNDIKYCPDTQEYRIFASQMQTTSATGRLSVKNPNLQNIPNDIDIK----D 1341
Query: 1907 IYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
+ + + ++ R FIP + +++++ DY IELR++AH S+D L +LS D
Sbjct: 1342 PFSQKSII---TLSIRSAFIP-RNGYVMVSIDYKNIELRILAHLSQDRTLSDILSNTERD 1397
Query: 1967 VFTMIAAR-WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE-------- 2017
+F IA W R E+ V R K++IYGI Y MG TLS ++ S NE
Sbjct: 1398 IFEEIARNFWNFRPEEPVPLSHRSLVKQIIYGISYCMGSETLSGKMFNSENEDFMLRPGE 1457
Query: 2018 ----AKEKIK-SFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
A E+ K +F + G+ + + +K YVE+ RKRF+ I ++ +++
Sbjct: 1458 DRIEAAERYKQNFFEKYQGLKQYKDFVENHLVEKHYVETSYSRKRFIHDICSDDSSKRAA 1517
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N++ QGSA+DI+KI M+ I+S + +F + R +LLQ+HDE
Sbjct: 1518 ARRAALNTVSQGSASDIMKIVMLGIYSFM------------RHFNKKEERAYMLLQIHDE 1565
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESA-ALLLVPLLVKIQVGSTWGSLEPF 2179
L+ EV + + + M++ LLVPL VK+Q+G +WG+L+ +
Sbjct: 1566 LLFEVREDSLSTFIYCTKNIMQNTDKKLLVPLPVKVQIGDSWGTLKDY 1613
>gi|449662379|ref|XP_002160420.2| PREDICTED: helicase POLQ-like [Hydra magnipapillata]
Length = 886
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 266/767 (34%), Positives = 412/767 (53%), Gaps = 96/767 (12%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
+++ RGI LY WQ CL + V +R+NL+Y TS GK+ VAE+L+++ ++ K A+
Sbjct: 151 LFQIRGIKSLYSWQKHCLKLSAVRKRKNLIYSLPTSGGKTLVAELLIMKEILKQKKNAIF 210
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
VLPYVSI EK L HV Y ++G LP K SV + TIEKAN++
Sbjct: 211 VLPYVSIVQEKVRELSPFAVEFNFHVEEYAASRG--ILPPRKRRKKNSVYIATIEKANAI 268
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQN-RGYLLELLLTKLRYAAGEGTSDSSSGENSGT 689
VN ++E R E+G+IVIDELHM+ + RG LLE+L++K+ Y
Sbjct: 269 VNSLVELNREDELGMIVIDELHMIGEGGGRGALLEILISKVLYKFLH------------- 315
Query: 690 SSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMD 749
+Q++GMSAT N+ + +L A LY +FRPV L EY+K+ + +Y +
Sbjct: 316 ----------VQVIGMSATFGNIEELKTFLNAELYINDFRPVELIEYVKMDDTLYEINKN 365
Query: 750 V------VRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFL 803
VRT +++A L DPDHI+ L EV+ + +S LIFCS++K CES A ++K +
Sbjct: 366 SEELYRKVRTNISSA-LKAGDPDHILTLVLEVIPQ-NSCLIFCSTKKNCESVALMLAKSM 423
Query: 804 -KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVE 862
K+ +N + +D+ L+ +G+ L+ T+ G+AYHH+GLT++ER+++E
Sbjct: 424 PKELMVNKKEERQQLLDL------LKSTISGVCFTLKSTIAFGIAYHHSGLTMDERKLIE 477
Query: 863 TCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTK 922
Y G++ +L TSTLAAGVNLPA+RVI R P IG F+ ++Y+QM GRAGR GIDT
Sbjct: 478 EAYSSGVLCLLCCTSTLAAGVNLPAKRVILRSPYIGNAFLMKSQYKQMVGRAGRAGIDTS 537
Query: 923 GESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGIVQTAEDI 978
GES++I + ++ K LL P+ SC S +D G H IL ++ I +
Sbjct: 538 GESIIILQQKDKVKARELLE---GPIGSCKSSLSYQDGKGFRHLILTLLGLKICMCLNTM 594
Query: 979 HRYVRCTL----LNSTKPFQDVVKSAQDSLRWLCHRKFL-----EWNEDTKLYSTTPLGR 1029
+ + TL L+ +K ++ + L L E NED +L T LG+
Sbjct: 595 ESFFKKTLHYIQLDDSKK-STLLDDISREINHLVKINMLVIIDGEENEDIQL---TSLGQ 650
Query: 1030 AAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPIN-VE-VEPDWELYYERFLE 1087
A + + +++ + + L A G VLA++LHL+YL+TP++ VE + W LYY + +
Sbjct: 651 ATYKGCMDIDKTPFIYEQLKHALSGMVLANELHLLYLATPVDHVENLYLKWMLYYNQVNK 710
Query: 1088 LSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDA 1147
L+ ++ VGV+E L + A G R S +DS
Sbjct: 711 LNPINLKTAEFVGVTESVLSKKAAGK--RCS---KDSFDEF------------------- 746
Query: 1148 QTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG 1207
+ KRF++AL+L L+++ VL+V ET++++RG +Q L ++ + S++ F E
Sbjct: 747 ----IYKRFFLALLLFELLKKKSVLQVSETYEISRGFLQNLLVSSISYTSLLIHFTEISE 802
Query: 1208 WYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRT 1254
++ + L R+S E+ L IP +K +RA L+K G RT
Sbjct: 803 FWVYKILFQALLERLSNTSSIELAPLLEIPGIKEARAHQLFKCGYRT 849
>gi|281207471|gb|EFA81654.1| hypothetical protein PPL_05648 [Polysphondylium pallidum PN500]
Length = 1179
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 250/750 (33%), Positives = 379/750 (50%), Gaps = 105/750 (14%)
Query: 496 SGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKS 555
S ++DC LP + +IY +RGI LY WQ ECL +L NL+Y TS GK+
Sbjct: 476 SQRIEDCCKQLFDLPEMVSNIYIRRGIKTLYDWQKECLTDGNLLDGSNLIYSLPTSGGKT 535
Query: 556 FVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK 615
VAEI++LR K L + P+VSI EKAE L + L V +YYG QG +P
Sbjct: 536 LVAEIILLRSAHLQKKKCLFIFPFVSIVTEKAESLVEFGQQLKFSVDAYYGIQGVIPVPP 595
Query: 616 DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAG 675
+ VCTIEKAN +VN+M+E+ R+SEIG +VIDELHM+ D RG LLE+L++K+ +
Sbjct: 596 GNGIVVCTIEKANIIVNQMIEDKRMSEIGTVVIDELHMIGDGERGVLLEMLISKILFVT- 654
Query: 676 EGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
+Q+VGMSAT+PN+A + W + +YE FRPV LEE
Sbjct: 655 ---------------------KGSVQVVGMSATIPNLAMMQRWFRGGVYEKQFRPVKLEE 693
Query: 736 YIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCEST 795
+++ IY+K + + L + D++V L EV EGHSVL+FC + + S
Sbjct: 694 FVRFEEKIYAKPDGAPARLEESRQL--EKGDNLVHLVKEVTSEGHSVLVFCHTIELTVSI 751
Query: 796 ARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDP----VLEETLPSGVAYHHA 851
A+ ++ L + V + + + LR A P L+ T+PSGVA+H++
Sbjct: 752 AKKIATALPE-ERQVKKDEKDIL--------LRNLGAATFPNADDNLKATVPSGVAFHNS 802
Query: 852 GLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMA 911
LT +ERE++E +++ + VL ATSTL+AGVNLPA+RVI R P++G +FI Y+QMA
Sbjct: 803 TLTNDEREIIEQGFKERTLNVLCATSTLSAGVNLPAKRVIIRTPKMGYNFISTRLYKQMA 862
Query: 912 GRAGRTGIDTKGESMLICKPE-EVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGG 970
GRAGR GIDT GES L C + E K ++ P+ S L+++ +LE ++ G
Sbjct: 863 GRAGRAGIDTSGESYLYCTDKREFDKAKSIITSDLEPVVSGLNDNPRQFQKIVLECISSG 922
Query: 971 IVQTAEDIHRYVRCTLL--NSTKP--------FQDVVKSAQDSLRWLCHRKFLEWNE--- 1017
I + I + CT N P + + ++L L F++ +
Sbjct: 923 IANNIKIILEFFSCTFYCCNIIVPQAHKKLTALEYLTLELTNTLNELEKSGFIQKQKPKT 982
Query: 1018 ----------------DTK----LYSTTPLGRAAFGSSLCPEESLIVLDD-LSRAREGFV 1056
DT ++ T LG A F SSL +++ +V+ D L+ +G +
Sbjct: 983 DGIDHFGYEEKPMPPLDTPIEDVIWEPTGLGAATFKSSLSTDQARVVMKDLLANQAKGII 1042
Query: 1057 LASDLHLVYLSTPI----NVEVEPDWELY---YERFLELSALDQSVGNQVGVSEPYLMRM 1109
L +L L +++TP+ ++ E W ++ Y+ + ++ +G+S Y+
Sbjct: 1043 LIDELQLCFITTPMFGLPFMKAE-HWVMFKRIYQSIQDSKKEKYAIAKIIGISGDYIDNK 1101
Query: 1110 AHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQET 1169
A+G + + S LH C RFYVA+ L L+QE
Sbjct: 1102 ANGDS-ELDQQTETSLANLH-----------------------C-RFYVAMALCDLIQEN 1136
Query: 1170 PVLEVCETFKVARGMVQALQENAGRFASMV 1199
P+ V +K+ RG +Q L +++G FA MV
Sbjct: 1137 PLSVVSARYKLGRGTLQNLMQSSGSFAWMV 1166
>gi|256082460|ref|XP_002577474.1| DNA polymerase theta [Schistosoma mansoni]
Length = 1257
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/511 (42%), Positives = 315/511 (61%), Gaps = 48/511 (9%)
Query: 508 WLPSEICSIYKKRGISKLYPWQVECLHVDGVLQR-RNLVYCASTSAGKSFVAEILMLRRL 566
++P E+ YK+ IS ++ WQ ECL++ GVL +NLVY A TSAGK+ VAEI++L+R+
Sbjct: 16 YVPEELYRQYKEMNISSIFSWQAECLNLPGVLDGCKNLVYSAPTSAGKTLVAEIIVLKRI 75
Query: 567 ISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYY-GNQGGGSLPKDTSVAVCTIE 625
+ + A ++LPYVS+ EK +L+ L LG V Y G+ G L +VAVCTIE
Sbjct: 76 LESALKAFIILPYVSVSREKMIYLQKLFNNLGIRVGGYMAGHSPPGGLSA-INVAVCTIE 134
Query: 626 KANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGE 685
KANSLVNR++EE RL E+GI+V+DELH++ D +RGYLLELLLTKL + +
Sbjct: 135 KANSLVNRLIEEERLDELGIVVVDELHLIGDTHRGYLLELLLTKLLFYS----------- 183
Query: 686 NSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS 745
+G+QIVGMSAT+PN+ ++ WL A +Y TNFRPVPL E+I +A S
Sbjct: 184 ----------RPYGIQIVGMSATLPNLKSLGQWLDAEVYITNFRPVPLTEFILSCDA-RS 232
Query: 746 KKMDVVRTILTA---------------ANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRK 790
K + + +A L D D + LC + + GH VL+FC +++
Sbjct: 233 KTNQFYKIVKSAKPADNLPLDPQLTSDTELNMVDEDGVFALCFDTLLNGHGVLVFCPTKQ 292
Query: 791 GCESTARHVSKFLKKFSINVHSSDSEFID---ITSAIDALRRCPAGLDPVLEETLPSGVA 847
CE A ++ S N+ + + +D + + +D L+RCPAGLD +L L GVA
Sbjct: 293 WCEQLADSMAHDPSVHS-NIGTRLALQLDRSGLVTCVDQLKRCPAGLDTILARCLGYGVA 351
Query: 848 YHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY 907
+HHAGLTVEERE++E +RKGL+R+L ATSTL++GVNLPARRVI R P +D Y
Sbjct: 352 FHHAGLTVEEREIIEFGFRKGLIRILIATSTLSSGVNLPARRVIIRTPLFHGKVLDFLTY 411
Query: 908 RQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL----SEDKNGMTHAI 963
+QM+GRAGR G+DT G+S+L+CKP+++ ++ L+ PP++SCL ++ + A+
Sbjct: 412 KQMSGRAGRQGVDTSGQSILLCKPKDLGRVRQLIMNGMPPVNSCLMGHGGSPESSLKRAL 471
Query: 964 LEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQ 994
LEV+ G V+T D Y+ TLL +T ++
Sbjct: 472 LEVIVNGFVETLSDALLYLSSTLLATTVTWE 502
Score = 177 bits (448), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 147/249 (59%), Gaps = 22/249 (8%)
Query: 1025 TPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEV--EPDWELYY 1082
T LGRA SSL P LIV ++L RAR L ++LHLVYL TP+ ++V + DW Y
Sbjct: 602 TALGRAVLSSSLGPIHGLIVYEELDRARRSIALDTELHLVYLLTPVYLDVGADLDWLCYL 661
Query: 1083 ERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNN 1142
E++ LS+ ++ V + +G+ E ++ R A GAP S G HG + N
Sbjct: 662 EQYQSLSSSERRVADLIGIEERFITRCAGGAP--------SSAVGCHG---------NTN 704
Query: 1143 MLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVF 1202
M++ + L + +RFY AL+L RLV E + V + F V RG++Q+LQ+ A +A MV++F
Sbjct: 705 MVN--RRLSLHRRFYTALVLYRLVNEDGLQIVAKKFGVNRGLLQSLQQQAATYAGMVTIF 762
Query: 1203 CERLGWYDLEGLIAKFQNRVSFGVRAEIVELT-TIPYVKGSRARALYKAGLRTPLAIAEA 1261
C RLGW +E +IA FQ+R+ +GV E+V+L +P V RARALY AG + ++A A
Sbjct: 763 CNRLGWNHMERVIANFQSRLCYGVSDELVDLIRLLPLVNAERARALYAAGYSSVSSLASA 822
Query: 1262 SISEIVKAL 1270
EI + L
Sbjct: 823 RPQEISRIL 831
>gi|360044621|emb|CCD82169.1| putative dna polymerase theta [Schistosoma mansoni]
Length = 1258
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/511 (42%), Positives = 315/511 (61%), Gaps = 48/511 (9%)
Query: 508 WLPSEICSIYKKRGISKLYPWQVECLHVDGVLQR-RNLVYCASTSAGKSFVAEILMLRRL 566
++P E+ YK+ IS ++ WQ ECL++ GVL +NLVY A TSAGK+ VAEI++L+R+
Sbjct: 16 YVPEELYRQYKEMNISSIFSWQAECLNLPGVLDGCKNLVYSAPTSAGKTLVAEIIVLKRI 75
Query: 567 ISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYY-GNQGGGSLPKDTSVAVCTIE 625
+ + A ++LPYVS+ EK +L+ L LG V Y G+ G L +VAVCTIE
Sbjct: 76 LESALKAFIILPYVSVSREKMIYLQKLFNNLGIRVGGYMAGHSPPGGLSA-INVAVCTIE 134
Query: 626 KANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGE 685
KANSLVNR++EE RL E+GI+V+DELH++ D +RGYLLELLLTKL + +
Sbjct: 135 KANSLVNRLIEEERLDELGIVVVDELHLIGDTHRGYLLELLLTKLLFYS----------- 183
Query: 686 NSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS 745
+G+QIVGMSAT+PN+ ++ WL A +Y TNFRPVPL E+I +A S
Sbjct: 184 ----------RPYGIQIVGMSATLPNLKSLGQWLDAEVYITNFRPVPLTEFILSCDA-RS 232
Query: 746 KKMDVVRTILTA---------------ANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRK 790
K + + +A L D D + LC + + GH VL+FC +++
Sbjct: 233 KTNQFYKIVKSAKPADNLPLDPQLTSDTELNMVDEDGVFALCFDTLLNGHGVLVFCPTKQ 292
Query: 791 GCESTARHVSKFLKKFSINVHSSDSEFID---ITSAIDALRRCPAGLDPVLEETLPSGVA 847
CE A ++ S N+ + + +D + + +D L+RCPAGLD +L L GVA
Sbjct: 293 WCEQLADSMAHDPSVHS-NIGTRLALQLDRSGLVTCVDQLKRCPAGLDTILARCLGYGVA 351
Query: 848 YHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY 907
+HHAGLTVEERE++E +RKGL+R+L ATSTL++GVNLPARRVI R P +D Y
Sbjct: 352 FHHAGLTVEEREIIEFGFRKGLIRILIATSTLSSGVNLPARRVIIRTPLFHGKVLDFLTY 411
Query: 908 RQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL----SEDKNGMTHAI 963
+QM+GRAGR G+DT G+S+L+CKP+++ ++ L+ PP++SCL ++ + A+
Sbjct: 412 KQMSGRAGRQGVDTSGQSILLCKPKDLGRVRQLIMNGMPPVNSCLMGHGGSPESSLKRAL 471
Query: 964 LEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQ 994
LEV+ G V+T D Y+ TLL +T ++
Sbjct: 472 LEVIVNGFVETLSDALLYLSSTLLATTVTWE 502
Score = 177 bits (448), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 147/249 (59%), Gaps = 22/249 (8%)
Query: 1025 TPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEV--EPDWELYY 1082
T LGRA SSL P LIV ++L RAR L ++LHLVYL TP+ ++V + DW Y
Sbjct: 602 TALGRAVLSSSLGPIHGLIVYEELDRARRSIALDTELHLVYLLTPVYLDVGADLDWLCYL 661
Query: 1083 ERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNN 1142
E++ LS+ ++ V + +G+ E ++ R A GAP S G HG + N
Sbjct: 662 EQYQSLSSSERRVADLIGIEERFITRCAGGAP--------SSAVGCHG---------NTN 704
Query: 1143 MLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVF 1202
M++ + L + +RFY AL+L RLV E + V + F V RG++Q+LQ+ A +A MV++F
Sbjct: 705 MVN--RRLSLHRRFYTALVLYRLVNEDGLQIVAKKFGVNRGLLQSLQQQAATYAGMVTIF 762
Query: 1203 CERLGWYDLEGLIAKFQNRVSFGVRAEIVELT-TIPYVKGSRARALYKAGLRTPLAIAEA 1261
C RLGW +E +IA FQ+R+ +GV E+V+L +P V RARALY AG + ++A A
Sbjct: 763 CNRLGWNHMERVIANFQSRLCYGVSDELVDLIRLLPLVNAERARALYAAGYSSVSSLASA 822
Query: 1262 SISEIVKAL 1270
EI + L
Sbjct: 823 RPQEISRIL 831
>gi|327354466|gb|EGE83323.1| DNA-directed DNA polymerase theta [Ajellomyces dermatitidis ATCC
18188]
Length = 757
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/655 (33%), Positives = 353/655 (53%), Gaps = 84/655 (12%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ + + G++ +YPWQ CL G L +NLVY A T GKS VA++LML+R+I
Sbjct: 133 LPPQLVTNFASLGVNCIYPWQASCLLGRGHLTAEKNLVYSAPTGGGKSLVADVLMLKRVI 192
Query: 568 S-TGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRS----------------------- 603
K A+LVLPYV++ EK + L ++E + +++ +
Sbjct: 193 DDPSKKAILVLPYVALVQEKLKWLRRVVEGVTKNIDTPTTVDEASSVPHWRQPQSSIRVT 252
Query: 604 -YYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYL 662
++G + DT +AVCTIEKANSLVN +EE +++++G++V+DELHM+ D++RGYL
Sbjct: 253 GFFGGSKTRATWADTDIAVCTIEKANSLVNTAIEECKINDLGVVVLDELHMLDDEHRGYL 312
Query: 663 LELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAA 722
+E+++TKL K D +QIVGMSAT+ N +A WL+A
Sbjct: 313 IEIMVTKLMLL-------------------KQD----IQIVGMSATLSNTEVLAKWLRAN 349
Query: 723 LYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTILTAANLGGKDPDH------------- 767
Y + +RP+P++E++ N IY + + RT A L DP
Sbjct: 350 YYISKYRPIPIQEHLVYNNEIYPATSSKEFFRT---ATQLNKPDPSQRNSLACRIIDRST 406
Query: 768 -----------IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSE 816
+V L E G+ L+FC SR+ C+S A +S+ + ++
Sbjct: 407 YKELATSTANAMVSLALETALSGYGALVFCGSRQACQSNAILISQAMPDETMLDKDLSER 466
Query: 817 FIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTAT 876
+D+ + + +L P G+DPV ++T+ GVA+HHAGLT EER+++ Y KG++RVL AT
Sbjct: 467 RMDLIAGLQSL---PCGIDPVFQKTVIKGVAFHHAGLTTEERDLIAEAYDKGILRVLVAT 523
Query: 877 STLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKK 936
+LAAG+NLPARRVI R+GRD + RQM GRAGR G D GE+ L+C+ ++++
Sbjct: 524 CSLAAGINLPARRVILCGARMGRDLVGPAMLRQMRGRAGRKGKDEVGETYLLCQKDDLEA 583
Query: 937 IMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDV 996
+ LL P + S L+ +K G+ A+LE +A +V + E ++ YV CTLL ++
Sbjct: 584 VAELLEAEMPAIASGLTPEKRGIKRALLEAIATRLVSSRETVNEYVTCTLLYQNMETDEL 643
Query: 997 VKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFV 1056
+L+ L ++ +D + + T LG+A SSL PE+ + + D+L RA + FV
Sbjct: 644 FSMVDSTLKELVDHGLVDLKQD-EYFEPTQLGQAVVSSSLSPEDGIFIHDELKRALKSFV 702
Query: 1057 LASDLHLVYLSTPI--NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRM 1109
+ ++H+ Y+ P+ + + DW ++ ++ L VGV ++ +M
Sbjct: 703 MDGEMHIFYMFAPLQNSAPADIDWSIFRDQMNNLDESGIRALQLVGVEPAFVNKM 757
>gi|345494550|ref|XP_003427319.1| PREDICTED: helicase POLQ-like isoform 2 [Nasonia vitripennis]
Length = 848
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 279/816 (34%), Positives = 418/816 (51%), Gaps = 168/816 (20%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ ++ K+ +GI KLY WQ ECL++ + +R+NL+Y TS GK+ VAEILMLR +I
Sbjct: 173 LPDKVKNLIKQHKGIDKLYDWQDECLNMKALNERKNLIYALPTSGGKTLVAEILMLREVI 232
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGG---GSLPKDTSVAVCTI 624
K A+ VLP+V++ EK + L L V Y +G K S+ +CTI
Sbjct: 233 CNKKNAIFVLPFVALVQEKIQSLTPFALALNFLVEEYAAEKGHYPPKKRRKKNSIYICTI 292
Query: 625 EKANSLVNRMLEEGRLSEIGIIVIDELHMV-ADQNRGYLLELLLTKLRYAAGEGTSDSSS 683
EKA S+VN ++E GRL+EIGIIVIDELH++ A+ RG LE LLTK+ +
Sbjct: 293 EKAQSIVNCLIELGRLNEIGIIVIDELHLLGANGGRGATLECLLTKVMHV---------- 342
Query: 684 GENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAI 743
NS + IVGMSAT+ N+ ++D+L A LY NFRPV ++EY+K I
Sbjct: 343 --NSN-----------VHIVGMSATIGNLKEISDYLNAELYTQNFRPVAIKEYVKCEGNI 389
Query: 744 Y---SKKMDVV---RTILTAANLGGK----DPDHIVELCDEVVQEGHSVLIFCSSRKGCE 793
+ +++ ++ +TI N K DPD + L +V + S LIFCSS+K CE
Sbjct: 390 WLIDTREENIFTDKKTI--KYNYSQKALQVDPDFLGGLVMDVAPKD-SCLIFCSSKKNCE 446
Query: 794 STARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGL 853
+ A +++ L K S+ VH +D + ++AL + PVL++T+ GVAYHH+GL
Sbjct: 447 NVAVLLTQVLLK-SVEVHKADEKI----KLLNALETETGSICPVLKKTIKFGVAYHHSGL 501
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T EER ++E +R G++ V+ TSTLAAGVNLPARRVIFR P +G +F++ +RY+QM GR
Sbjct: 502 TAEERRLLEEAFRSGILCVICCTSTLAAGVNLPARRVIFRSPYVGTEFLNMSRYKQMIGR 561
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQ 973
AGR GI GES+LIC + +KI N S + + + ++K
Sbjct: 562 AGRAGISEIGESILICTKRDSEKI----NTSNDDVTTSVKKEKKN--------------- 602
Query: 974 TAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFG 1033
Y+ TL+NST+ LC PLGRAA
Sbjct: 603 -------YI--TLVNSTE-------------LELC-----------------PLGRAAMK 623
Query: 1034 SSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQ 1093
S+ + + + +DL +A+ VL LHL+YL TP +V
Sbjct: 624 GSIDLQSAHTLYEDLKKAQANLVLVDYLHLLYLITPYDV--------------------- 662
Query: 1094 SVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVC 1153
+G++E + R+ R GIT N+ R+
Sbjct: 663 -ASRLLGINEAAVDRL-------------------------RAGITPKNV-----DQRIV 691
Query: 1154 KRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLE 1212
+RFYV L+L+ L + V + ++V RG +Q L A F+S V FC+ L ++ +
Sbjct: 692 QRFYVTLMLNELWNRRSIYFVADKYQVNRGTIQNLLSLASSFSSSVVRFCDELDEFWAFK 751
Query: 1213 GLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFE 1272
L++ F ++++ +E+ L +PYVK RA+ LYKAG ++ +IA+A +++
Sbjct: 752 DLLSTFGQKLTYCCASELEPLMDLPYVKIGRAKQLYKAGFKSLQSIAKAKPEDMMDK--- 808
Query: 1273 SSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEEAR 1308
I RR V +I + A+ ++LEK E R
Sbjct: 809 ----IEHLPRR----VVSQIISSAKLLLLEKVENLR 836
>gi|83318174|gb|AAI09170.1| Hel308 protein [Mus musculus]
Length = 971
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 238/639 (37%), Positives = 359/639 (56%), Gaps = 65/639 (10%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 276 LPSKVRDLYVQLKGIKKLYDWQHTCLTLRSVQERKNLIYSLPTSGGKTLVAEILMLQELL 335
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 336 CRQKDVLMILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKG--RFPPIKRREKKSLYIA 393
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKA+SLVN ++E RLS +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 394 TIEKAHSLVNALIETSRLSTLGLVVVDELHMICEGSRGAILEMTLAKVLY-----TSKTT 448
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +L+A Y + FRPV L+E++KV +
Sbjct: 449 ------------------QIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDT 490
Query: 743 IYSKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY + + L K DPD +V L EV+ +S L+FC S+K CE+
Sbjct: 491 IYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALVTEVI-PNYSCLVFCPSKKNCEN 549
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL K +N + I +LR G + PVL+ T+P G+AYHH+GL
Sbjct: 550 VAEMLCKFLSKDYLNHREKEK-----CEVIKSLRNIGNGKVCPVLKRTVPFGIAYHHSGL 604
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T EER+++E Y G++ +LT TSTLAAGVNLPARRVI R P + F+ +Y+QM GR
Sbjct: 605 TSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQYKQMVGR 664
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GIDT GES+L+ + ++ ++++ L++ PL +C S E G+ L ++
Sbjct: 665 AGRAGIDTAGESILLLQEKDKQQVLELIS---GPLETCCSHLVEEFTKGIQALFLSLIGL 721
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKS----AQDSLRWLCHRKFLEW-----NEDTK 1020
I + DI++++ T + KS D+L L + L+ NE +
Sbjct: 722 KIAASLGDIYQFMSGTFFGVQQKILLKEKSLWEITVDALEHLTEKGLLQKDSCGDNEGLE 781
Query: 1021 L-YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPD 1077
+ T LG+A+F ++ + DL + EG VL S LHL+YL+TP ++ + EPD
Sbjct: 782 CHFRITKLGQASFKGAIDLAYCDTLYRDLKKGLEGLVLESLLHLIYLTTPYDLAAQSEPD 841
Query: 1078 WELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMR 1116
W +Y+++F +LS +Q+V +GVSE ++ + A G +R
Sbjct: 842 WMVYFKQFGQLSPTEQNVAALLGVSESFIGKKAAGQAVR 880
>gi|336274120|ref|XP_003351814.1| hypothetical protein SMAC_00360 [Sordaria macrospora k-hell]
gi|380096096|emb|CCC06143.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 972
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 268/830 (32%), Positives = 410/830 (49%), Gaps = 122/830 (14%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ + + GI +YPWQ +CL G+L +NLVY A T GKS VA++LML+R++
Sbjct: 153 LPKQLVANFAALGIKSIYPWQKQCLLGPGLLSGDKNLVYSAPTGGGKSLVADLLMLKRVL 212
Query: 568 ---STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGG--------GSLPKD 616
+ A+LVLPYV++ EK L ++ + R G+ G P
Sbjct: 213 DDPAGEAKAILVLPYVALVQEKVRWLRSVVGGISRS-----GDLGQKQPQQKLWAKRPDK 267
Query: 617 TSVAVCTI---EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYA 673
++ V KANSL+N + + +S++ +V+DE HM+ D RGYLLEL+ TKL
Sbjct: 268 DTIRVVGFFGGSKANSLINAAITDCSISKLRAVVLDECHMIDDGFRGYLLELMTTKLLCL 327
Query: 674 AGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPL 733
+ +QI+ MSAT+ N+ + DWL YET++RPVP+
Sbjct: 328 EQQ-----------------------VQIIAMSATLTNIRLLKDWLGGHSYETHYRPVPI 364
Query: 734 EEYIKVGNAIY-----------SKKMDV---------------------VRTILTAANLG 761
+E++ IY + ++D +R I + +
Sbjct: 365 KEHLVYDGKIYPAATTASLLKTATQLDTRNAVTTTTQGLPPSTTSSLQHIRFIHPSTHRE 424
Query: 762 GKDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFID 819
KDP + +V L +E + G+ VL+F SSR GCES A +S+ L FS E
Sbjct: 425 FKDPVMNAVVALANETARAGYGVLVFSSSRAGCESDAVLISRVLPPFSEVTDPLIRE--R 482
Query: 820 ITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTL 879
+ ++ LR GLDP LE+T+P GVA+HHAGLT EERE++ Y G +V AT++L
Sbjct: 483 RLNLLNELRSSSTGLDPKLEQTIPCGVAFHHAGLTTEERELIANAYDAGTFKVCVATASL 542
Query: 880 AAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMG 939
AAG+NLPARRVI R+G D + RQM GRAGR G D GE+ L C+ +++ ++
Sbjct: 543 AAGINLPARRVILHGARMGIDLVGPAMLRQMRGRAGRKGKDEVGETYLCCRRNDLEVVVD 602
Query: 940 LLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLN-----STKPFQ 994
L++ P + SCL D+ + A+LEV+A + + E + YV T+L + K +
Sbjct: 603 LMHADLPQIASCLVSDERRIRRALLEVIAIKLATSREALDEYVGRTMLACEQRLAEKETE 662
Query: 995 DVVKS-AQDSLRWLCHRKFLEWNED----TKLYSTTPLGRAAFGSSLCPEESLIVLDDLS 1049
+ +K + L L F+ D T YS T LG A SSL P++ + + +L
Sbjct: 663 ERMKGYVEAGLEKLKEMGFITVTVDERYETASYSATKLGGAIVASSLDPDDGVFIHKELE 722
Query: 1050 RAREGFVLASDLHLVYLSTPIN---VEVEPDWELYYERFLELSALDQS---VGNQVGVSE 1103
RA +GFV+ D+H++Y TP++ +W +++ E+ LD+S V +G+
Sbjct: 723 RALKGFVMDGDMHVLYNFTPVSDLGNGTPINWRVFWN---EMEKLDESGLRVMGFLGLKP 779
Query: 1104 PYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILS 1163
L RM G GI + + T R RFY+AL L
Sbjct: 780 VVLNRMLRG------------------------GILKETIDEEKDTTRRYHRFYLALQLR 815
Query: 1164 RLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVS 1223
L E P+ V + + V RG VQ L + FA+ + FCE +GW + + F +R+
Sbjct: 816 DLCNEIPIHRVAQKYDVPRGAVQTLAQICQGFAAGMIKFCEAMGWGAMAAALDHFADRLK 875
Query: 1224 FGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFES 1273
G RA+++ L+ I +VK AR + G +T +A A E+V L ++
Sbjct: 876 AGARADLLGLSKITFVKSRTARVFWDNGFKTVAVVANADPKELVPVLMQA 925
>gi|320586873|gb|EFW99536.1| DNA-directed DNA polymerase [Grosmannia clavigera kw1407]
Length = 1131
Score = 382 bits (981), Expect = e-102, Method: Compositional matrix adjust.
Identities = 267/869 (30%), Positives = 413/869 (47%), Gaps = 171/869 (19%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECL--HVDGVLQRRNLVYCASTSAGKSFVAEILMLRRL 566
LP + + + GI +YPWQ+ CL H + +RNLVY A T GKS VA++LMLR++
Sbjct: 146 LPPALIANFVALGICSIYPWQMHCLLSHHSILAGKRNLVYAAPTGGGKSLVADVLMLRQV 205
Query: 567 I---------STG---------KMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQ 608
+ +TG ALLVLP+V++ EK L ++ + R G+Q
Sbjct: 206 LQSNDGIVGNNTGAGFRDFRRRSKALLVLPFVALVQEKVRWLRRVVAGVPRSDAQSIGSQ 265
Query: 609 ------------------------GGGSLPK---DTSVAVCTIEKANSLVNRMLEEGRLS 641
GG + D + V TIEKAN+L+N +++G +S
Sbjct: 266 TANGPSTSWQRHPAEDTVRVVGFFGGAKIRATWADFDIGVATIEKANALINTAIDDGTIS 325
Query: 642 EIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQ 701
++ +IV+DELHMV D +RGY+ EL+ TKL H +Q
Sbjct: 326 DLKVIVLDELHMVDDSHRGYIFELMATKLLCLD-----------------------HSVQ 362
Query: 702 IVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLG 761
I N+ +A WL+A YET +RP+P+EE++ IY + + R L A +
Sbjct: 363 I--------NMDLLATWLRAYSYETRYRPIPIEEHLVYDGEIYVAE-EANRRFLDALTIP 413
Query: 762 GKD------------------------PDHIVELCDEVVQEGHSVLIFCSSRKGCESTAR 797
K + +V L +E + G+ L+F SSR ES A
Sbjct: 414 DKKETAAPTQPLRIIQPSGHRELQDSVTNAVVSLANETARSGYGALVFSSSRAASESDAL 473
Query: 798 HVSKFLKKFSINVHSSDSEF-IDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVE 856
+S+ + V + SE +D+ S LR GLD VL +T+P GVA+HHAG+T E
Sbjct: 474 LISRVMPT-PAEVDPAVSEARLDLVS---TLRGLNTGLDSVLSQTVPVGVAFHHAGMTTE 529
Query: 857 EREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGR 916
ER+++ Y G+++V AT LAAG+NLPARRVI R+GR+ I RQM GRAGR
Sbjct: 530 ERDLIANAYDNGVLKVCVATCGLAAGINLPARRVILHNARMGRELIGPAMLRQMRGRAGR 589
Query: 917 TGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAE 976
G D GE+ L C+ +V ++ L++ P + SCL EDK + A+LEV+ + + E
Sbjct: 590 KGKDEVGETYLCCRGADVDDMLDLMHAELPHISSCLQEDKRRLQRALLEVITVRLATSPE 649
Query: 977 DIHRYVRCTLLNSTKPFQDVVKSAQD-------------------------SLRWLCHRK 1011
+H YV TLL + VV S D SL L
Sbjct: 650 SVHAYVEKTLL-----YHSVVNSCADDGIPANDGQTAAKADLQPLWADVETSLETLQRMG 704
Query: 1012 FLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPIN 1071
F+ E Y T G+A S+L PE+++ + +L RA + FVL ++H++Y TP++
Sbjct: 705 FVSKGEFGD-YEPTRFGKAVVASALDPEDAVFIHSELERALQAFVLDGEMHVLYTFTPVH 763
Query: 1072 --VEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTK 1126
+ +W ++E E+ LD+S V + +G+ + +M G L++ST
Sbjct: 764 DTIGTAINWRRFWE---EMEQLDESGLRVLHFLGLKPSIISKMLRGG------TLKESTP 814
Query: 1127 GLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQ 1186
+ +T R+ +RFY+AL L L E P+ V + + RG VQ
Sbjct: 815 ------------------EEKETARIYRRFYLALQLRDLCNEMPIHRVAQKYDSPRGAVQ 856
Query: 1187 ALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARA 1246
L++ FA+ + FCE + W + ++ F +R+ G +A+++ L I +VK AR
Sbjct: 857 NLEQTCEGFAAGMIKFCEHMDWGAMASVLEHFVDRLKAGAKADLLALAKIAFVKSRTARV 916
Query: 1247 LYKAGLRTPLAIAEASISEIVKALFESSS 1275
++ G +T +A E+V L ++ +
Sbjct: 917 FWENGFKTVATVANTDPRELVPVLMQAQA 945
>gi|324502503|gb|ADY41102.1| Helicase POLQ-like protein [Ascaris suum]
Length = 924
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 276/940 (29%), Positives = 468/940 (49%), Gaps = 127/940 (13%)
Query: 416 KGSVTHKSCQKIKFKCHHDNTSRTEGISDVQEKDSVLIVHERKLDISSQGIDSI-TSDSP 474
+ S+ + +KI + +NT+ T + ++++ V E K+D+ + + + P
Sbjct: 72 RRSLAERQSEKIWLHINKENTANTR----ISQEEADAAVSESKMDVQTNCYTPLRVTVVP 127
Query: 475 TNVIKKPVGNEKSDEAGTPSSSGMLKDCLD----------LSSWLPSEICSIYK-KRGIS 523
+ P+ E SD T + +D +D L + LP I +Y+ KR I
Sbjct: 128 QRSLGVPLKGEVSDIRVTSN-----EDAIDETPRSSPEEFLFANLPDNIRQLYQEKRKIK 182
Query: 524 KLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSIC 583
LY WQ +CL +L N++ T AGK+ +AE+LM+ I + +L++PYV++
Sbjct: 183 DLYDWQKQCLSNSCLLNGENMIISLPTGAGKTLIAEVLMIHEAIIRKRSCILMVPYVAVA 242
Query: 584 AEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSLVNRMLEEG 638
EK + L + E L + Y N+G LP +SV V TIEKAN L+N ++E+G
Sbjct: 243 QEKVQSLCIFEESLPLLIEEYAANKG--RLPPIKRRNKSSVYVATIEKANMLINSLIEQG 300
Query: 639 RLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAH 698
R+ E+GIIV+DELHM+ + +RG ++E LTK + G G
Sbjct: 301 RIDELGIIVVDELHMLGEGSRGAIIEQALTKFMHR-GSG--------------------- 338
Query: 699 GLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAA 758
Q+VGMSAT+ N+ VA +L A+++ T+FRPV L E +K+ + ++ ++D+ ++
Sbjct: 339 --QVVGMSATLANINEVAQFLHASVFSTDFRPVQLVERVKINSTLF--RVDIGGRLIPEV 394
Query: 759 NLG-----GKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSS 813
LG KDPD +V L +++ + S +IFC +++ CE+ R +++ + + ++H
Sbjct: 395 ELGENRLARKDPDGLVPLLQDIIPK-RSAIIFCPTKQNCENVCRLLTRLVPRALRDLHQK 453
Query: 814 DSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVL 873
+ + S + L LE + +GVA+HH+GLT +ER+++E+ ++ G++R+L
Sbjct: 454 ERQ----ASVAALMEEVDGKLCTTLEMGILAGVAFHHSGLTADERQIIESAFQDGIIRIL 509
Query: 874 TATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKP-E 932
+TSTLAAGVNLPARRVI + P +GR+ + +Y QM GRAGR G D +G+++ I P
Sbjct: 510 CSTSTLAAGVNLPARRVIIKSPLVGREPLSKAQYLQMVGRAGRAGYDDRGDAVTIVHPGY 569
Query: 933 EVKKIMGLLNESCPPLHSCLS--EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNST 990
E K +L PL C S D++ ++ +L++V+ I T E + TL
Sbjct: 570 EEAKFREML---AGPLMECKSGLSDRSLLSTFLLDLVSLKIADTMEHFGAVISTTLFGMQ 626
Query: 991 KPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIV----LD 1046
D ++ + L +++ + + YS T LG AAF +++ P +L + LD
Sbjct: 627 N--DDAASIVEECVNDLLNKRMISCSA-VGTYSVTILGDAAFTANIPPIAALAINTSLLD 683
Query: 1047 DLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYL 1106
+LS G VL+S HL++ P ++ ++ DW ++Y+ + LS +Q + +G+ E L
Sbjct: 684 NLSM---GIVLSSHFHLIFTIIPFDIVIDVDWNVFYDEYRSLSISEQKLLGTMGIQEKDL 740
Query: 1107 MRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLV 1166
++ P KL+ L R Y+A ++ +
Sbjct: 741 VKCFVERP-----KLKAGEAAL--------------------------RLYIAFMMRHIW 769
Query: 1167 QETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFG 1225
E P+ V E F VARG +Q ++ AS ++ F E++ + L+ L+ R+
Sbjct: 770 DEEPLWSVAERFHVARGWLQGALQSTCSQASSITRFSEKVPQLWPLKHLLPDLVKRLRDC 829
Query: 1226 VRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQ 1285
+ E++ L I VK RAR LY G +T A+A A + +V S + RR
Sbjct: 830 CQQELIPLLAIDGVKRGRARQLYDCGYKTIGAVASADPNALV-------SMVEHLSRR-- 880
Query: 1286 LGVAKKIKNGARKIVLEKAEEARIAAFSAFKSLGLNVPQF 1325
A+ I N A+ I+ ++ E + +G PQF
Sbjct: 881 --QARTIVNSAQVIIRDQLAE----KVEEMEQMGACAPQF 914
>gi|346322629|gb|EGX92228.1| DNA-directed DNA polymerase theta [Cordyceps militaris CM01]
Length = 871
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 270/852 (31%), Positives = 406/852 (47%), Gaps = 154/852 (18%)
Query: 470 TSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSS---WLPSEICSIYKKRGISKLY 526
T P++ ++ ++ A TPSSS L L LS LP+ + + + GI+ +Y
Sbjct: 77 TPGPPSSTSEEGEYTQRHKLAATPSSS--LDPELHLSHAVYGLPAPLVANFATLGINHIY 134
Query: 527 PWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAE----ILMLRRLI-STGKMALLVLPYV 580
PWQ CL G+L RNLVYCA T GKS VA+ +LML+R++ S ALLVLPYV
Sbjct: 135 PWQRNCLKGPGLLTGERNLVYCAPTGGGKSLVADSAVPVLMLKRILHSRESKALLVLPYV 194
Query: 581 SICAEKAEHLEVLLE---------------------PLGRHVRSYYGNQGGGSLPKDTSV 619
++ EK L L+E P G V ++G + D +
Sbjct: 195 ALVQEKVRWLRQLVEGLKLPSPVEKDPHAPFNARPTPDGLRVVGFFGGGKVRATWDDFDI 254
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
VCT+EKAN LVN +E ++++ +V+DELHM+ D++RGY LEL+ TKL
Sbjct: 255 GVCTLEKANMLVNAAIENCSIAKLQAVVLDELHMIDDEHRGYTLELIGTKL--------- 305
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
H +QIVGMSAT+PN+ +A WL A +ET +RPVP+EE++
Sbjct: 306 --------------LSLEHTVQIVGMSATIPNMDLMAKWLNAHSFETRYRPVPIEEHLVC 351
Query: 740 GNAIYSKK----------------MDVVRTILTAANLGGKDP--DHIVELCDEVVQEGHS 781
AI++ +D VRTI + + DP + +V L E G+
Sbjct: 352 NGAIFAADNPRCLPDNADQLKNSLVDAVRTIGPSLHKELSDPVLNAVVALAHETASAGYG 411
Query: 782 VLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEET 841
VLIF SR ES AR +S+
Sbjct: 412 VLIFAGSRSMTESLARCISR---------------------------------------- 431
Query: 842 LPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDF 901
AG+T EERE++ Y G + V AT +LAAG+NLPARRVI R+GRDF
Sbjct: 432 ---------AGITAEERELIAAAYDSGTLLVCVATCSLAAGINLPARRVILHNARMGRDF 482
Query: 902 IDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTH 961
I RQM GRAGR G GE+ L C+ +++ ++ L+ P + SCL+ + +
Sbjct: 483 IGPAMLRQMRGRAGRQGKSPVGETYLCCREADLETVVQLIKAELPKVTSCLTSENRRVQR 542
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKL 1021
A+LEV+A + + + I Y +LL T+ V + + SL+ L + +E ++
Sbjct: 543 AVLEVIAIHLATSYDSIRFYFGKSLLALTQDEARVDEDLKASLKDLEGLELIE-SDAFGN 601
Query: 1022 YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI-NVEVEPDWEL 1080
Y+ T LGRA S++ P++ + V +L +A FV+ +LH++Y+ TP+ ++ V +W++
Sbjct: 602 YAPTQLGRAIVASAIDPDDGIFVHRELVKALRAFVMDGELHILYIFTPVQDLGVTINWQV 661
Query: 1081 YYERFLELSALDQS---VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLG 1137
+ EL LD+S V +G+ +++ A G P+
Sbjct: 662 FRN---ELQLLDESGLRVLRFLGIKPTAILKFAQGVPV---------------------- 696
Query: 1138 ITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFAS 1197
N + RV +RFY+AL L L E P+ V + RG VQ L + F +
Sbjct: 697 --PENTPEQKEMSRVYRRFYLALQLRDLCNEMPIHVVARKYDAPRGSVQTLSQTCHGFGA 754
Query: 1198 MVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
V FC+ + W + + F +R+ G R E++ L IP++K AR ++ G RT
Sbjct: 755 GVIKFCQHMDWGLMAAALDHFSDRLLAGARTELLCLAKIPFIKSRTARVFWENGYRTVGT 814
Query: 1258 IAEASISEIVKA 1269
IA A E+V A
Sbjct: 815 IANADPKELVPA 826
>gi|380492466|emb|CCF34582.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 778
Score = 378 bits (971), Expect = e-101, Method: Compositional matrix adjust.
Identities = 245/798 (30%), Positives = 393/798 (49%), Gaps = 115/798 (14%)
Query: 525 LYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLI-STGKMALLVLPYVSI 582
+YPWQ CL G+L RNLVY A T +LML+R++ LL+LPYV++
Sbjct: 1 MYPWQKTCLRGPGLLAGERNLVYSAPTG--------VLMLKRVLEDKNAKVLLILPYVAL 52
Query: 583 CAEKAEHLEVLLEPLGR---------------------HVRSYYGNQGGGSLPKDTSVAV 621
EK L +++ + + V ++G D + V
Sbjct: 53 VQEKVRWLRNIVQGVSKPKDEVEDTKRIWRRRADEDSIRVIGFFGGSKIKPTWSDFDIGV 112
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS 681
CTIEK N+LVN +++ + + +V+DELHM+ D +RGYL+EL+ TKL
Sbjct: 113 CTIEKGNALVNTAIDDCSIKHLKAVVLDELHMIDDDHRGYLMELMGTKL----------- 161
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYI---- 737
+QI+GMSATM N+ +A WL A YET +RPVP+EE++
Sbjct: 162 ------------LTLPQPIQIIGMSATMSNINLLASWLGAHSYETRYRPVPIEEHLVYDG 209
Query: 738 ------------------KVGNAIYSKKMDVVRTILTAANLGGKDP--DHIVELCDEVVQ 777
K G + VR + +++ +DP + +V L E +
Sbjct: 210 NVYPAATTSELLNTASRLKTGTQPAQQASRAVRRVEPSSHKEFQDPVLNAVVSLASETAR 269
Query: 778 EGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDA-LRRCPAGLDP 836
G+ L+F SSR GCE AR +++ + D + ++ + A LR GLDP
Sbjct: 270 AGYGALVFASSRYGCEYDARWIARVMP----TQDELDPDLVEKRVDLLAELRSLGTGLDP 325
Query: 837 VLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPR 896
VLEET+P GVA+H +ER+++ Y G+++V AT +LAAG+NLPARRVI R
Sbjct: 326 VLEETVPMGVAFH------QERDLIANAYDAGVIKVCIATCSLAAGINLPARRVILHNAR 379
Query: 897 IGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK 956
+GRDF+ + RQM GRAGR G D GE+ L C+ +++++++ L++ P + S L DK
Sbjct: 380 MGRDFVGPSMLRQMRGRAGRKGKDEVGETYLCCRKDDLEQVVELMHAEMPQITSGLMTDK 439
Query: 957 NGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWN 1016
+ A+LEV+A + + + YV TLL+ + F + + SL+ L F+
Sbjct: 440 QRIQRALLEVIAVRLATSRCALDEYVSKTLLSHSGSFDSLRSCVEASLQNLQATNFVT-T 498
Query: 1017 EDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI-NVEVE 1075
+ Y T LG+A S+L P++ + + +L RA + FV+ ++H++Y TP+ +
Sbjct: 499 DVCGNYQPTKLGKAIVASALDPDDGVFIHKELERALQAFVMDGEMHILYTFTPVQDFGHN 558
Query: 1076 PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYR 1135
+W ++ L V +G+ + R+A G S L+++T
Sbjct: 559 INWRVFRNEMENLDGSGHRVLGFLGLKRAVINRLAQG------STLKEATA--------- 603
Query: 1136 LGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRF 1195
+ +T RV +RFY+A L L E P+ V + V RG VQ L + F
Sbjct: 604 ---------EEKETARVHRRFYMAFELRDLCNEMPIHAVARKYDVPRGAVQTLSQTCHGF 654
Query: 1196 ASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTP 1255
A+ + FCE +GW + + F +R+ G +A+++ L I +VK AR ++ G R+
Sbjct: 655 AAGMIKFCEHMGWGMMAAALDHFSDRLRAGAKADLLALAQITFVKSRTARVFWENGFRSV 714
Query: 1256 LAIAEASISEIVKALFES 1273
A+A A +E++ L ++
Sbjct: 715 AAVANADPNELLPILMQA 732
>gi|308481777|ref|XP_003103093.1| CRE-HEL-308 protein [Caenorhabditis remanei]
gi|308260469|gb|EFP04422.1| CRE-HEL-308 protein [Caenorhabditis remanei]
Length = 903
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 258/817 (31%), Positives = 419/817 (51%), Gaps = 81/817 (9%)
Query: 500 KDCLDLSSWLPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVA 558
++ LD S LP+ +YKK + + K Y WQ ECL +L N + T AGK+ +A
Sbjct: 140 EEILDPSKCLPTRDMEMYKKIKKLDKFYDWQQECLSDTRLLNGENCILSLPTGAGKTLIA 199
Query: 559 EILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKD-- 616
E+LMLR + + A+LVLPYV+I EK L + G ++ Y N+G K
Sbjct: 200 EVLMLREAVVKKRNAILVLPYVAIVQEKISSLAPFEDAFGINIEEYASNKGRFPPIKRRN 259
Query: 617 -TSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAG 675
SV V TIEKAN L+N ++ +G+L+ IG++V+DELHM+ D RG +LE LL K Y G
Sbjct: 260 RVSVYVATIEKANMLINSLITQGQLNRIGMVVVDELHMIGDGGRGAILEQLLAKFLYK-G 318
Query: 676 EGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEE 735
G QIVGMSAT+PN+ + L++ +Y TNFRPV L E
Sbjct: 319 CG-----------------------QIVGMSATLPNIDDLQFALRSFVYSTNFRPVELTE 355
Query: 736 YIKVGNAIYSKKMDVVRTI---LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGC 792
++K+G ++ D T L NL DPD I +L +++ + +V IFC ++K C
Sbjct: 356 FVKIGQTMHQVTGDGELTPAGDLPVNNLKSTDPDGICQLLAKLIPKSSAV-IFCPNKKNC 414
Query: 793 ESTARHVSKFLKKFSINVHSSDSE-FIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHA 851
E+ A ++K L ++SE F++ + R +D VL++ + SGVAYHH+
Sbjct: 415 ENVAVLIAKTLPAHIRQAKRAESEAFLESYLTDNDEER----MDSVLKKCILSGVAYHHS 470
Query: 852 GLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMA 911
GLT +ER+ VE + +GL+ V+ ATSTLAAGVNLP RRVI + P +GR+ + +Y QMA
Sbjct: 471 GLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKCPMVGRERLGKAQYLQMA 530
Query: 912 GRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGI 971
GRAGR G DTKG+ + I K E ++ + +S P M IL++V I
Sbjct: 531 GRAGRAGFDTKGDCITIVKQGEEERWFREMLKSEIPRCMSSLSSLESMGSFILDIVVLKI 590
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAA 1031
++I R V+ +L + + ++ K + SL+ L F+ +E T + + LG A
Sbjct: 591 ASNLKEIMRGVQYSLYAAQESMDNIQKLVEQSLKRLEEHYFITIDETTGEITPSDLGNAV 650
Query: 1032 FGSSLCPEESLIVLDDL-SRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSA 1090
F + P+E+ + DL S +G + +S HL+++ TP +W+L+ + L
Sbjct: 651 FNAGFAPDEATRLHSDLVSSLNQGVIFSSHFHLLFIITPYEQSCNINWDLFLLMYNALPQ 710
Query: 1091 LDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTL 1150
++ + + G+ E +++ IT ++++ +
Sbjct: 711 SERKLLGECGLEEKFILEAI---------------------------ITRVDLIAGTPRM 743
Query: 1151 RVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWY 1209
R+ Y+AL+L ++ P+ V E F V +G +Q +++ A+ ++ F E++ +
Sbjct: 744 RL----YIALMLQKIWNHEPMYAVAERFGVEKGWLQTTLQSSISQAASIAKFSEKITTMW 799
Query: 1210 DLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKA 1269
L L+ + R+S + E++ L T+ +K +RA L+KAG +T IA A ++V+
Sbjct: 800 PLRKLLPELVQRLSEAAQPELLPLMTVDGIKKARAGILFKAGYKTVGMIARACPLKLVQE 859
Query: 1270 LFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEE 1306
L ++L AK I A+ ++ ++ +E
Sbjct: 860 L-----------GTIRLAQAKSIIASAKMVLRDQVDE 885
>gi|429856175|gb|ELA31099.1| DNA-directed DNA polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 752
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 237/769 (30%), Positives = 393/769 (51%), Gaps = 101/769 (13%)
Query: 562 MLRRLIS-TGKMALLVLPYVSICAEKAEHLEVLLEPLGR--------------------- 599
ML+R++ LLVLPYV++ EK L +++ + +
Sbjct: 1 MLKRVLEEKNAKVLLVLPYVALVQEKVRWLRNIVQGVPKPVDEIDDEKRIWRRRADEDSI 60
Query: 600 HVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNR 659
V ++G D + VCTIEKAN+LVN +++ + + +V+DELH++ D +R
Sbjct: 61 RVIGFFGGSKIKPTWADFDIGVCTIEKANALVNTAIDDCSIKHLKAVVLDELHIIDDDHR 120
Query: 660 GYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWL 719
GYL+EL+ TKL +QI+GMSATM N+ +A+WL
Sbjct: 121 GYLMELMGTKL-----------------------LSLPQPVQIIGMSATMSNINLLANWL 157
Query: 720 QAALYETNFRPVPLEEYI----------------KVGNAIYSKKMD---VVRTILTAANL 760
A YET +RPVP+EE++ K N + +++++ +R I ++ +
Sbjct: 158 GAHSYETRYRPVPIEEHLVYEGNIYPAATTSELLKTANELKTQQLENTRAIRRIESSDHK 217
Query: 761 GGKDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFI 818
KDP + +V L E + G+ VL+F SSR GCES AR +++ + H D +
Sbjct: 218 ELKDPVLNAVVSLASETARSGYGVLVFASSRPGCESDARWIARVMPA----SHELDPALV 273
Query: 819 DITSAIDA-LRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATS 877
D + A LR G+DPVLEET+P+GVA+HH VEERE++ + Y G+++V AT
Sbjct: 274 DKRIDLLAELRSLGTGIDPVLEETVPAGVAFHH----VEEREIIASAYDSGVIKVCIATC 329
Query: 878 TLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKI 937
+LAAG+NLPARRVI R+GRDF+ + RQM GRAGR G D GE+ L C+ ++++++
Sbjct: 330 SLAAGINLPARRVILHNARMGRDFVGPSMLRQMRGRAGRKGKDEVGETYLCCRKDDLEQV 389
Query: 938 MGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVV 997
+ L++ P + S L DK + A+LEV+A + + + + Y+ TLL P + +
Sbjct: 390 VDLMHADMPQITSGLITDKQRIQRALLEVIAVRLATSKDALDDYLSKTLLAHAGPPEPLQ 449
Query: 998 KSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVL 1057
+ + SL+ L F+ + Y T LG A S+L P++ + + +L +A + FV+
Sbjct: 450 ECVETSLKNLQSMGFITADVLGN-YQPTKLGHAIVASALDPDDGVFIHKELEKALQAFVM 508
Query: 1058 ASDLHLVYLSTPI-NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMR 1116
++H++Y TP+ + +W+++ L V +G+ + R+A G
Sbjct: 509 DGEMHILYTFTPVHDFGTNINWQVFRNEMENLDDSGHRVLGFLGLKCAVINRLAQG---- 564
Query: 1117 ISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCE 1176
S L+++T + + +RV +RFY+A L L E PV V
Sbjct: 565 --STLKETTP------------------EEKEIVRVHRRFYLAFQLRDLCNEVPVHAVAR 604
Query: 1177 TFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTI 1236
+ V RG VQ L + FA+ + FCE +GW + + F +R+ G +++++ L I
Sbjct: 605 KYDVPRGAVQNLSQTCHGFAAGMIKFCEHMGWGVISAALDHFSDRLRAGAKSDLLALAQI 664
Query: 1237 PYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQ 1285
+VK AR ++ G R+ A+A A E++ L ++S ++ R++
Sbjct: 665 TFVKSRTARVFWENGFRSVAAVANADPKELLPILMQASRQAQPSKLRIK 713
>gi|46124913|ref|XP_387010.1| hypothetical protein FG06834.1 [Gibberella zeae PH-1]
Length = 873
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 260/807 (32%), Positives = 392/807 (48%), Gaps = 153/807 (18%)
Query: 525 LYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLIS-TGKMALLVLPYVSI 582
+YPWQ CL G+L +NLVYCA T GKS VA++LML+R++ G ALLVLPYV++
Sbjct: 117 IYPWQKACLKGPGLLTGEKNLVYCAPTGGGKSLVADVLMLKRILQEKGTKALLVLPYVAL 176
Query: 583 CAEKAEHLEVLLEPL-------------------GRHVRSYYGNQGGGSLPK-----DTS 618
EK L +++ L + G GGG + D +
Sbjct: 177 VQEKVRWLRSVVQGLRFAPETAIDDDKRIWRRRADENAVRVVGFFGGGKVRATWADFDIA 236
Query: 619 VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGT 678
+ C+I S++ +V+DELHM+ D +RGYLLEL+ TKL
Sbjct: 237 IDDCSI----------------SKLSAVVLDELHMIDDDHRGYLLELMATKL-------- 272
Query: 679 SDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
S E S +QIVGMSAT+PN+ +A WL YET +RPVP+EE++
Sbjct: 273 ---LSLEQS------------VQIVGMSATLPNMDMMAKWLGGHCYETRYRPVPIEEHLV 317
Query: 739 VGNAIYSKKMDVVRTILTAANLGG-----------------------KDP--DHIVELCD 773
IY I TAA L +DP + +V L
Sbjct: 318 YDGNIYPAG-STSSLIKTAAQLNSRTTQTQAQTKPIRRIEPSNHKELRDPVLNAVVTLAC 376
Query: 774 EVVQEGHSVLIFCSSRKGCESTARHVSKFL---KKFSINVHSSDSEFIDITSAIDALRRC 830
E G L+F SR CES AR +++ + + I+V + + LR
Sbjct: 377 ETAVAGFGALVFAGSRGMCESDARWITRAMPAPHELRIDVVDRRMDL------LGELRSL 430
Query: 831 PAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRV 890
GLDPVLEET+ GVA+HHAGLT EER++V PARRV
Sbjct: 431 NTGLDPVLEETVLYGVAFHHAGLTTEERDLVAAA---------------------PARRV 469
Query: 891 IFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHS 950
I R+GRDF+ + RQM GRAGR G GE+ L C+ ++++++ L+N PP+ S
Sbjct: 470 ILHNCRMGRDFVGPSMLRQMRGRAGRQGKAPIGETYLCCRENDLEQVVELMNAELPPVAS 529
Query: 951 CLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHR 1010
CLS + + A+LEV++ + + E I Y +LL+ T Q V K SL +
Sbjct: 530 CLSTENRRIQRALLEVISIRLATSHEAISDYFSKSLLSHTHDAQFVKKCITSSLEEIESM 589
Query: 1011 KFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI 1070
F+ + +++ T LG+A S++ P++ + V D+LSRA + FV+ ++H++Y TP+
Sbjct: 590 GFIT-QDSLSMFTATQLGKAIVASAIDPDDGVFVHDELSRALQAFVMDGEMHVLYTFTPV 648
Query: 1071 NVE-VEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTK 1126
V +W+++ E+ LD+S V +G+ ++++A GA LR++T+
Sbjct: 649 QESGVMVNWQVFRN---EMERLDESGLRVLRLLGIKPTTVLKLAQGA------TLRETTQ 699
Query: 1127 GLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQ 1186
+ Q RV +RFY+AL L L E P+ V + V RGMVQ
Sbjct: 700 ------------------EEKQVARVHRRFYLALQLRDLCNEVPIHIVARKYDVPRGMVQ 741
Query: 1187 ALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARA 1246
L + FA+ + FCE++ W + + F +R+ G RA+++ L IP++K AR
Sbjct: 742 NLSQTCQGFAAGMIKFCEQMSWGVMAAALDHFSDRLVAGARADLLALAKIPFIKSRTARV 801
Query: 1247 LYKAGLRTPLAIAEASISEIVKALFES 1273
++ G RT IA A +E++ L ++
Sbjct: 802 FWENGFRTVATIANADPTELLPVLMQA 828
>gi|341891947|gb|EGT47882.1| hypothetical protein CAEBREN_02542 [Caenorhabditis brenneri]
Length = 899
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 258/812 (31%), Positives = 413/812 (50%), Gaps = 89/812 (10%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP IYKK + + + Y WQ ECL +L N + T AGK+ +AE+LMLR I
Sbjct: 145 LPDRDMEIYKKMKKLKEFYDWQKECLADKRLLDGENCILSLPTGAGKTLIAEVLMLREAI 204
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ A+LVLPYV+I EK L + G ++ Y N+G P K SV V
Sbjct: 205 VRKRNAILVLPYVAIVQEKISSLAPFEDAFGINIEEYASNKG--RFPPIKRRKRVSVYVA 262
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKAN L+N ++ +G+L IG++V+DELHM+ D RG +LE LL K + G G
Sbjct: 263 TIEKANMLINSLITQGQLDRIGLVVVDELHMIGDGGRGAILEQLLAKFLFK-GCG----- 316
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QIVGMSAT+PN+ + L++ +Y TNFRPV L E++K+G
Sbjct: 317 ------------------QIVGMSATLPNIDDLKFALRSFVYSTNFRPVELTEFVKIGQT 358
Query: 743 IYSKKMD---VVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
++ + D L NL DPD I +L +++ + +V IFC ++K C++ A +
Sbjct: 359 MHQVEEDGDLKPAGDLPVNNLKSSDPDGICQLLAKLIPKSSAV-IFCPNKKNCQNVAVLI 417
Query: 800 SKFLKKFSINVHSSDSEFI--DITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEE 857
+K L ++SE S D R +D L++ + SGVAYHH+GLT +E
Sbjct: 418 AKSLPAHIRQAKRAESELFLQSYLSDNDDER-----MDATLKQCILSGVAYHHSGLTQDE 472
Query: 858 REVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRT 917
R+ VE + +GL+ V+ ATSTLAAGVNLP RRVI + P +GR+ + +Y QMAGRAGR
Sbjct: 473 RKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKSPMVGRERLGKAQYLQMAGRAGRA 532
Query: 918 GIDTKGESMLICKP-EEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAE 976
G DTKG+ + I K EE + +L P S LS M+ IL+++ I +
Sbjct: 533 GFDTKGDCITIVKQGEEERWFREMLKSEIPRCMSSLS-TVEAMSSFILDIIVLKIASNID 591
Query: 977 DIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSL 1036
++ R V +L + + + + + + S++ L F+ T + T LG A F +
Sbjct: 592 EVMRGVEYSLYAAQESSEKIRQVVESSVKRLEEHSFITTEAQTSTITPTDLGNAVFNAGF 651
Query: 1037 CPEESLIVLDDL-SRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSV 1095
PEE+ + DL S +G + +S HL+++ TP +W+L+ + L ++ +
Sbjct: 652 EPEEATRLHSDLMSSLNQGVIFSSHFHLLFIITPYEQMCNINWDLFLLMYNALPCSERKL 711
Query: 1096 GNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKR 1155
++ G+ E +++ IT ++ A T R+ R
Sbjct: 712 LSECGLEEKFILEAI---------------------------ITRVDL--AAGTPRM--R 740
Query: 1156 FYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGL 1214
Y+AL+L ++ P+ V E F V +G +QA +++ A+ ++ F E++ + L L
Sbjct: 741 LYIALMLQKIWNHEPMYTVAERFGVEKGWLQATLQSSISQAASIAKFSEKIETMWPLRKL 800
Query: 1215 IAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESS 1274
+ + R+S + E++ L ++ +K +RA L+KAG +T IA A ++V+ L
Sbjct: 801 LPELVQRLSEAAQPELIPLMSVDGIKKARAAILFKAGYKTVGMIARADPMKLVQEL---- 856
Query: 1275 SWIAEAQRRVQLGVAKKIKNGARKIVLEKAEE 1306
++L AK I + A+ ++ ++ +E
Sbjct: 857 -------GTIRLSQAKSIISSAKMVLRDQVDE 881
>gi|294886779|ref|XP_002771849.1| dna polymerase theta, putative [Perkinsus marinus ATCC 50983]
gi|239875649|gb|EER03665.1| dna polymerase theta, putative [Perkinsus marinus ATCC 50983]
Length = 1188
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 287/862 (33%), Positives = 431/862 (50%), Gaps = 128/862 (14%)
Query: 503 LDLSSW-LPSEICSIYK-KRGISKLYPWQVECLHVD------------------------ 536
LDL W LP I Y+ GI+ LY WQ ECL +
Sbjct: 255 LDLRFWHLPPNIIEAYRLTSGITGLYNWQAECLSTNIASPLCCHFECLPSIVTNQTLLGC 314
Query: 537 ---GVLQRRNL--------------VYCASTSAGKSFVAEILMLRRLISTGKMALLVLPY 579
G R ++ VYCA TS GKS VAE++MLRRL+ G + LPY
Sbjct: 315 TLFGFENRPSIPNPQRSVDRPFKCGVYCAPTSGGKSLVAELIMLRRLLFRGLRGVYTLPY 374
Query: 580 VSICAEKAEHLEVLLEPLGR-------HVRSYYGNQGG------GSLPKDTSVAVCTIEK 626
VSIC EK + L + G+ + +++ N G VA+ T+EK
Sbjct: 375 VSICQEKLQQLRRVWGDSGQSSSLAALRIEAFHSNASVDKEGFIGGWTAGVDVALGTLEK 434
Query: 627 ANSLVNRMLEEG--RLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSG 684
N +VNR++ + S +G ++IDELHMV D+ RG++LEL+L KL A ++S+ G
Sbjct: 435 VNGMVNRLVSQADSSTSNVGTVIIDELHMVGDEQRGHILELILLKLMLFATGRITNSTDG 494
Query: 685 ENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWL-QAALYETNFRPVPLEEYIKVGNAI 743
E + LQ+V MSAT+P++ + WL +A + T FRPVPLE ++KVG+ +
Sbjct: 495 E-----------LYQLQVVCMSATLPSLEPLKGWLLEADTFTTEFRPVPLEYFVKVGSRL 543
Query: 744 YSKKMD-VVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKF 802
+S +D VVR I + +DPD I L EV V++FC+++ CE TA H++
Sbjct: 544 HSGDLDRVVREIPSLQ----RDPDRITALVWEVASNATGVIVFCATKAWCEKTAMHIAGT 599
Query: 803 LKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVE 862
+ D+ A+D LR CPAGL+ L +++P+GVAYHH+GLT+EER V+E
Sbjct: 600 WP--GVPWDRDDTVLRGRQQALDILRTCPAGLNATLGKSIPTGVAYHHSGLTMEERRVIE 657
Query: 863 TCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI--D 920
T +R G + L ATSTLAAGVNLPARRVI R ++G +D +R RQM GRAGR G
Sbjct: 658 TAFRNGHIHTLCATSTLAAGVNLPARRVIIRSLQVGISPLDASRLRQMCGRAGRAGFTGS 717
Query: 921 TKGESMLICKPE-EVKKIMGLLNESCPPLHSCLSEDKNG----------------MTHAI 963
KGE++L K + E + L+N L S L+ + +T A+
Sbjct: 718 NKGEAILCVKDDREARTAKDLINAQLTGLSSRLTGIETAGHSIPMLTKDVHLGDLLTRAL 777
Query: 964 LEVVAGGIVQTAEDI-HRYVRCTLLNSTKPFQDVVKSAQDS----LRWLCHRKFLEWNED 1018
LEV+ ++ ++I R+ L +P ++ S Q L L +F++ NE+
Sbjct: 778 LEVICLKLLSHVDEIPARFCPRLLRYHLQPDEETRNSLQAEVAACLEELKSNRFVKVNEE 837
Query: 1019 TKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDW 1078
L ++T LG A SSL EE+ +V DL RA +L+SDLHL+YL TP+ ++
Sbjct: 838 DGLITSTALGEAVAFSSLKIEEASVVFRDLRRASVRILLSSDLHLLYLVTPVRHDIPVHL 897
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDST-------KGLHGK 1131
E Y + ++ +++ ++ G+ E +L A R ++ L ST K +
Sbjct: 898 EAYLNLYNSMTPEQRAIADRCGIDEGFLNTCA-----RRNALLSTSTPVPACYRKSQKDE 952
Query: 1132 LEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQEN 1191
E++ + ++ +RFY L+L L++ P+ + T+KV G +Q LQ
Sbjct: 953 QEWQRQLGTH------------RRFYATLLLHHLLKGMPLPILASTYKVNCGQIQQLQST 1000
Query: 1192 AGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKG---SRARALY 1248
+ F MV FC+RL + L + ++S G + + E+T+ G S A AL+
Sbjct: 1001 STAFCGMVVGFCDRLRCWALAAALTPLSEQLSTGAPSFVAEMTSKLSHVGLPVSWAIALH 1060
Query: 1249 KAGLRTPLAIAEASISEIVKAL 1270
AGL T AIA + + + L
Sbjct: 1061 SAGLETVTAIAGSDTDTVHRIL 1082
>gi|268575988|ref|XP_002642974.1| Hypothetical protein CBG15258 [Caenorhabditis briggsae]
Length = 898
Score = 371 bits (953), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 271/820 (33%), Positives = 423/820 (51%), Gaps = 89/820 (10%)
Query: 500 KDCLDLSSWLPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVA 558
++ +D S LP YK+ + + K Y WQ ECL +L N + T AGK+ +A
Sbjct: 137 EEVIDPSKCLPERAMEKYKRIKKLEKFYDWQQECLSDKRLLNGENCILSLPTGAGKTLIA 196
Query: 559 EILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP---- 614
EILMLR I + A+LVLPYV+I EK L + G ++ Y N+G P
Sbjct: 197 EILMLREAIVHKRNAILVLPYVAIVQEKISSLAPFEDAFGINIEEYASNKG--RFPPIKR 254
Query: 615 -KDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYA 673
K SV V TIEKAN L+N ++ + +L +IG++V+DELHM+ D RG +LE LL K Y
Sbjct: 255 RKRVSVYVATIEKANMLINSLITQNQLDQIGMVVVDELHMIGDGGRGAILEQLLAKFLYK 314
Query: 674 AGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPL 733
G G QIVGMSAT+PN+ + L++ +Y TNFRPV L
Sbjct: 315 -GSG-----------------------QIVGMSATLPNIDDLQFALRSFVYSTNFRPVEL 350
Query: 734 EEYIKVGNAIYSKKM--DVVRT-ILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRK 790
E++K+G ++ + D+ L NL DPD I +L +++ + +V IFC ++K
Sbjct: 351 AEFVKIGQTMHQVENGGDLKPAGDLPTNNLKSTDPDGICQLLAKLIPKSSAV-IFCPNKK 409
Query: 791 GCESTARHVSKFLKKFSINVHSSDSE-FIDITSAIDALRRCPAGLDPVLEETLPSGVAYH 849
CE+ A ++K L ++SE F+ + R +D L++ + SGVAYH
Sbjct: 410 NCENVAVLIAKTLPAHIRQAKRAESEAFLQSYLTDNDDER----MDADLKQCILSGVAYH 465
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
H+GLT +ER+ VE + +GL+ V+ ATSTLAAGVNLP RRVI + P +GR+ + +Y Q
Sbjct: 466 HSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKCPMVGRERLGKAQYLQ 525
Query: 910 MAGRAGRTGIDTKGESMLICKP-EEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVA 968
MAGRAGR G DTKG+ + I K EE + +L P S LS M IL+++
Sbjct: 526 MAGRAGRAGFDTKGDCITIVKQGEEERWFREMLKSDIPRCMSSLS-SVEAMGSFILDMIV 584
Query: 969 GGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLG 1028
I + E++ V+ +L + + + + + SL+ L +FL ED ++ + + LG
Sbjct: 585 LKIAKNLEEVLLGVQYSLYAAQESPDKIRELVEKSLQRLEEHRFLTI-EDREI-TPSDLG 642
Query: 1029 RAAFGSSLCPEESLIVLDDL-SRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLE 1087
A F + PEE+ + DL S +G + +S HL+++ TP +W+L+ L
Sbjct: 643 SAVFNAGFAPEEATRLHTDLISSLNQGVIFSSHFHLLFIITPYEQVCNINWDLF---LLL 699
Query: 1088 LSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDA 1147
+AL QS +G GL K IT +++ A
Sbjct: 700 YNALPQSERKLLGEC------------------------GLEEKFILEAIITRVDLI--A 733
Query: 1148 QTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL- 1206
T R+ R Y+AL+L ++ P+ +V E F V +G +QA +++ A+ ++ F E++
Sbjct: 734 GTTRM--RLYIALMLQKIWNHEPMFQVAERFGVEKGWLQATLQSSISQAASIAKFSEKIT 791
Query: 1207 GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEI 1266
+ L L+ + R+S + E++ L T+ VK +RA L+KAG +T IA A+ ++
Sbjct: 792 TMWPLRKLLPELVQRLSEAAQPELLPLMTVDGVKKARAAILFKAGYKTVGMIARANPLKL 851
Query: 1267 VKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEE 1306
V+ L ++L AK I N A+ ++ ++ +E
Sbjct: 852 VQEL-----------GTIRLAQAKSIINSAKMVLRDQVDE 880
>gi|302915813|ref|XP_003051717.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732656|gb|EEU46004.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 890
Score = 368 bits (945), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 256/842 (30%), Positives = 412/842 (48%), Gaps = 134/842 (15%)
Query: 484 NEKSDEAGTPSSSGMLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-R 541
+++ A TP++S + L+ ++ LP + + GI ++YPWQ CL G+L
Sbjct: 86 SQRRSIAATPTASHDPELALNHPTYGLPRHLVDNFASLGIKQIYPWQKSCLKGPGLLTGE 145
Query: 542 RNLVYCASTSAGKSFVAEILMLRRLIS-TGKMALLVLPYVSICAEKAEHLEVLLEPLGRH 600
+NLVYCA T GKS VA++LML+R++ G ALLVLPYV++ EK L +++ L
Sbjct: 146 KNLVYCAPTGGGKSLVADVLMLKRILEEKGTKALLVLPYVALVQEKVRWLRNVVQGLRLA 205
Query: 601 VRSY-------------------YGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLS 641
+ G GGG + + A I AN+LVN +++ ++
Sbjct: 206 TETVIDDDKRIWRRRADEGTVRVVGFFGGGKV--RATWADFDI-GANALVNTAIDDCSIT 262
Query: 642 EIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQ 701
++ +V+DELHMV D++RGYLLEL+ +KL +Q
Sbjct: 263 KLRAVVLDELHMVDDEHRGYLLELVASKL-----------------------LSLEQPIQ 299
Query: 702 IVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLG 761
I+GMSAT+PN+ +A WL YET +RPVP+EE++ +Y I TAA L
Sbjct: 300 IIGMSATLPNMDLMAQWLDGHCYETRYRPVPIEEHLVYDGNVYPAG-STSSLIRTAAQLN 358
Query: 762 GK-----------------------DP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
+ DP + +V L E G L+F SR CES A
Sbjct: 359 NRPTQTPSLTKPIRRIEPSTHKELRDPVLNAVVTLACETATSGFGALVFAGSRGMCESDA 418
Query: 797 RHVSKFLKKFSINVHSSDSEFIDI-TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTV 855
R +S+ + + E +D + LR G+DPVLEET+ GVA+H G+++
Sbjct: 419 RWISRAMPP----PNELRPEVVDRRMDLLGELRSLNTGIDPVLEETVLYGVAFHRKGISL 474
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAG 915
+ ++ +PARRVI R+GR+F+ + RQM GRAG
Sbjct: 475 QRDMMM-----------------------VPARRVILHNCRMGREFVGPSMLRQMRGRAG 511
Query: 916 RTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTA 975
R G GE+ L C+ ++++++ L+N PP+ SCL+ + + A+LEVV+ + +
Sbjct: 512 RQGKAPIGETYLCCRENDLEQVVELMNAELPPVTSCLNTENRRIQRALLEVVSIRLATSH 571
Query: 976 EDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSS 1035
E IH Y +LL+ T + V + SL + F+E + + + T LG+A S+
Sbjct: 572 ESIHDYFSKSLLSHTHSAKFVNECITSSLEEIEKLGFVE-RDSFSMLTATQLGKAIVASA 630
Query: 1036 LCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPIN-VEVEPDWELYYERFLELSALDQS 1094
+ P++ + V +LSRA + FV+ ++H++Y TP+ + +W+++ E+ LD+S
Sbjct: 631 IDPDDGIFVHKELSRALQAFVMDGEMHVLYTFTPVQEFGITVNWQVFRN---EMEGLDES 687
Query: 1095 ---VGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLR 1151
V +G+ ++R+A GA LR+ T + Q R
Sbjct: 688 GMRVLRLLGIKPTTILRLAQGA------TLREVTP------------------EEKQLAR 723
Query: 1152 VCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDL 1211
+ +RFY+AL L L E P+ V + V RG VQ L + FA+ + FCE++GW +
Sbjct: 724 IHRRFYLALQLRDLCNEVPIHMVARKYDVPRGTVQNLSQTCQGFAAGMIKFCEQMGWGVM 783
Query: 1212 EGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
+ F +R+ G RA+++ L IP++K AR ++ G RT IA A +E++ L
Sbjct: 784 AAALDHFSDRLIAGARADLLALAKIPFIKSRTARVFWENGFRTVATIANADPAELLPVLM 843
Query: 1272 ES 1273
++
Sbjct: 844 QA 845
>gi|67471598|ref|XP_651740.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56468512|gb|EAL46353.1| hypothetical protein EHI_007040 [Entamoeba histolytica HM-1:IMSS]
Length = 848
Score = 368 bits (945), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 238/807 (29%), Positives = 419/807 (51%), Gaps = 86/807 (10%)
Query: 517 YKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
Y+K+GI +L+ WQVECL GV + NLVY A TS+GK+ V+EILM+ R T K +
Sbjct: 87 YEKKGIQELFEWQVECLKTKGVREGTENLVYSAPTSSGKTLVSEILMIERYCQTQKKMIY 146
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRML 635
++PYVS+ EK E+ + +L+ + +++ Y+ N+G + K+ + +CTIEK N L+N+++
Sbjct: 147 IVPYVSMAQEKEEYFQEILKSIKINIKGYFQNRG---IDKEFDIGICTIEKGNGLINKLI 203
Query: 636 EEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKAD 695
EE + E+ +I+IDE+HM+ D+ RG ++E ++ K+
Sbjct: 204 EEKSIEEVSLIIIDEIHMIFDKRRGQIIEKIINKI-----------------------MS 240
Query: 696 PAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTIL 755
+QI+GMSAT+ N++ W++A Y++ +RP+ +EEYI + +K+ ++ R +
Sbjct: 241 IERKIQIIGMSATIGNISIFEKWIKAKTYQSTYRPIKIEEYIVCKGKVINKEGEIKRVLK 300
Query: 756 TAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDS 815
G D ++I+E+ +E +E V+ FCS++KGCE + + + +KK I + +
Sbjct: 301 -----GEGDIENIIEIMEEAKKERKGVICFCSTKKGCERKGKEIVQGIKKRKIEEMNKEI 355
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
E I + R G++ ++ + G+ YHH+G+T+EER+++E ++KG++ ++ A
Sbjct: 356 EEERIEMI-KEMERSKFGIEEEFQDMIKYGIVYHHSGITIEERQIIEKSFKKGIITLIIA 414
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEE-- 933
TSTLA GVNLPA RVIF +P+IG++++ +Y+QM+GRAGR GID KGES + CK E
Sbjct: 415 TSTLALGVNLPASRVIFDKPKIGKEYLTRVQYQQMSGRAGRFGIDEKGESYIFCKEGEMS 474
Query: 934 -VKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKP 992
VK +M + NE+ E + ILE + GI++ +DI +++ TL
Sbjct: 475 VVKNLMKVTNENKEIEIQEKEEIQ--EKEDILEGIYNGIIENKKDIEKWIEKTL------ 526
Query: 993 FQDVVKSAQDSLRWLCHRKFLEW----------------NEDTKLYSTTPLGRAAFGSSL 1036
+ +K + + W +K+ E K +GRA +
Sbjct: 527 YWYKIKEKEGAEEW--KKKYSEQMIEILKHDGMIEEIEEEGGEKRIKCNQIGRATVKGGM 584
Query: 1037 CPEESLIVLDDLSRAREGF----VLASDLHLVYLSTPINVEVEPDWELYYERFLELSALD 1092
S + +++ EG+ ++ D++ +YL IN E E +W + ++ E+ +
Sbjct: 585 GINSSKEIYFNIN---EGYLKKNIINKDVYYLYLG--INNEYEINWSCFEKKVEEIEDI- 638
Query: 1093 QSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRV 1152
++ N+ LM+ +P+ I +S K + +N M+ Q +
Sbjct: 639 KNKNNKEYQDYQELMKTIGISPVFIC--YMESMKKVK---------LTNEMIKKIQ---I 684
Query: 1153 CKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLE 1212
K+FY +IL ++ E +L++ ++RG++Q LQ N +M+ F L DL
Sbjct: 685 HKKFYYFIILYEMIHEKNILQIINEMGISRGVLQQLQNNTITTLNMIIQFSNELHNVDLS 744
Query: 1213 GLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFE 1272
+ +R+ FGV +IV + I + AR L G IA AS +I +
Sbjct: 745 LYLKLLIDRIKFGVCNDIVNIIQIDGITKEIARKLIVFGFNDISKIAHASFLDIFSLIHH 804
Query: 1273 SSSWIAEAQRRVQLGVAKKIKNGARKI 1299
S + +Q ++ L + ++I A++I
Sbjct: 805 LSKSHSLSQLKIDLELTQRIIQSAQEI 831
>gi|449708550|gb|EMD47993.1| DNA double strand break repair Rad50 ATPase, putative [Entamoeba
histolytica KU27]
Length = 848
Score = 367 bits (943), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 238/807 (29%), Positives = 419/807 (51%), Gaps = 86/807 (10%)
Query: 517 YKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
Y+K+GI +L+ WQVECL GV + NLVY A TS+GK+ V+EILM+ R T K +
Sbjct: 87 YEKKGIQELFEWQVECLKTKGVREGTENLVYSAPTSSGKTLVSEILMIERYCQTQKKMIY 146
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRML 635
++PYVS+ EK E+ + +L+ + +++ Y+ N+G + K+ + +CTIEK N L+N+++
Sbjct: 147 IVPYVSMAQEKEEYFQEILKSIKINIKGYFQNRG---IDKEFDIGICTIEKGNGLINKLI 203
Query: 636 EEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKAD 695
EE + E+ +I+IDE+HM+ D+ RG ++E ++ K+
Sbjct: 204 EEKSIEEVSLIIIDEIHMIFDKRRGQIIEKIINKI-----------------------MS 240
Query: 696 PAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTIL 755
+QI+GMSAT+ N++ W++A Y++ +RP+ +EEYI + +K+ ++ R +
Sbjct: 241 IERKIQIIGMSATIGNISIFEKWIKAKTYQSTYRPIKIEEYIVCKGKVINKEGEIKRVLK 300
Query: 756 TAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDS 815
G D ++I+E+ +E +E V+ FCS++KGCE + + + +KK I + +
Sbjct: 301 -----GEGDIENIIEIMEEAKKERKGVICFCSTKKGCERKGKEIVQGIKKRKIEEMNKEI 355
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
E I + R G++ ++ + G+ YHH+G+T+EER+++E ++KG++ ++ A
Sbjct: 356 EEERIEMI-KEMERSKFGIEEEFQDMIKYGIVYHHSGITIEERQIIEKSFKKGIITLIIA 414
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEE-- 933
TSTLA GVNLPA RVIF +P+IG++++ +Y+QM+GRAGR GID KGES + CK E
Sbjct: 415 TSTLALGVNLPASRVIFDKPKIGKEYLTRVQYQQMSGRAGRFGIDEKGESYIFCKEGEMS 474
Query: 934 -VKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKP 992
VK +M + NE+ E + ILE + GI++ +DI +++ TL
Sbjct: 475 VVKNLMKVTNENKEIEIQEKEEIQ--EKEDILEGIYNGIIENKKDIEKWIEKTL------ 526
Query: 993 FQDVVKSAQDSLRWLCHRKFLEW----------------NEDTKLYSTTPLGRAAFGSSL 1036
+ +K + + W +K+ E K +GRA +
Sbjct: 527 YWYKIKEKEGAEEW--KKKYSEQMIEILKHDGMIEEIEEEGGEKRIKCNQIGRATVKGGM 584
Query: 1037 CPEESLIVLDDLSRAREGF----VLASDLHLVYLSTPINVEVEPDWELYYERFLELSALD 1092
S + +++ EG+ ++ D++ +YL IN E E +W + ++ E+ +
Sbjct: 585 GINSSKEIYFNIN---EGYLKKNIINKDVYYLYLG--INNEYEINWSCFEKKVEEIEDI- 638
Query: 1093 QSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRV 1152
++ N+ LM+ +P+ I +S K + +N M+ Q +
Sbjct: 639 KNKNNKEYQDYQELMKTIGISPVFIC--YMESMKKVK---------LTNEMIKKIQ---I 684
Query: 1153 CKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLE 1212
K+FY +IL ++ E +L++ ++RG++Q LQ N +M+ F L DL
Sbjct: 685 HKKFYYFIILYEMIHEKNILQIINEMGISRGVLQQLQNNTITTLNMIIQFSNELHNVDLS 744
Query: 1213 GLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFE 1272
+ +R+ FGV +IV + I + AR L G IA AS +I +
Sbjct: 745 LHLKLLIDRIKFGVCNDIVNIIQIDGITKEIARKLIVFGFNDISKIAHASFLDIFSLIHH 804
Query: 1273 SSSWIAEAQRRVQLGVAKKIKNGARKI 1299
S + +Q ++ L + ++I A++I
Sbjct: 805 LSKSHSLSQLKIDLELTQRIIQSAQEI 831
>gi|71995032|ref|NP_001022911.1| Protein HELQ-1, isoform a [Caenorhabditis elegans]
gi|351065833|emb|CCD61810.1| Protein HELQ-1, isoform a [Caenorhabditis elegans]
Length = 923
Score = 363 bits (931), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 263/826 (31%), Positives = 427/826 (51%), Gaps = 97/826 (11%)
Query: 503 LDLSSWLPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEIL 561
LD S LP +Y+K + + K Y WQ ECL +L N + T AGK+ +AE+L
Sbjct: 145 LDPSKCLPERDMEMYRKIKKLDKFYDWQQECLSDKRLLDGENCILSLPTGAGKTLIAEVL 204
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KD 616
MLR I + A+LVLPYV+I EK L + G ++ Y N+G P K
Sbjct: 205 MLREAIVRKRNAILVLPYVAIVQEKISALAPFEDAFGINIEEYASNKG--RFPPIKRRKR 262
Query: 617 TSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGE 676
SV V TIEKAN L+N ++ +G+L +G++V+DELHM+ D RG +LE LL K Y +
Sbjct: 263 VSVYVATIEKANMLINSLITQGQLDRVGMVVVDELHMIGDGGRGAILEQLLAKFLY---K 319
Query: 677 GTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEY 736
GT QIVGMSAT+PN+ + L+A +Y TNFRPV L E+
Sbjct: 320 GTG---------------------QIVGMSATLPNIDDLKFALRAFVYSTNFRPVELTEF 358
Query: 737 IKVGNAIY--SKKMDVVRT-ILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCE 793
+K+G ++ S+ D+ L NL DPD I +L +++ + +S +IFC ++K CE
Sbjct: 359 VKIGQTMHQVSENGDLNPAGDLPTNNLKSTDPDGICQLLAKLIPK-NSAVIFCPNKKNCE 417
Query: 794 STARHVSKFLKKFSINVHSSDSE-FIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAG 852
+ A ++K L ++S+ F+ + + R +D VL++ + SGVAYHH+G
Sbjct: 418 NVAVLIAKTLPAHIRQAKRAESDAFLQSYLSDNDDER----MDAVLKQCILSGVAYHHSG 473
Query: 853 LTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAG 912
LT +ER+ VE + +GL+ V+ ATSTLAAGVNLP RRVI + P +GR+ + +Y QMAG
Sbjct: 474 LTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKAPMVGRERLGKAQYLQMAG 533
Query: 913 RAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIV 972
RAGR G DTKG+ + I K E ++ + +S P + M IL+ V +
Sbjct: 534 RAGRAGFDTKGDCITIIKAGEEERWFREMLKSDIPRCMSSLSSEESMGSFILDCVVLKLA 593
Query: 973 QTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEW--------NEDTKLYST 1024
+ E+I VR +L + + +++ K + S++ L F+ +E + S+
Sbjct: 594 ENIEEIMTAVRYSLFYAQESPENIRKLVESSVKRLEEHYFITIEPLEQDVASEPSAQASS 653
Query: 1025 TP----------LGRAAFGSSLCPEESLIVLDDL-SRAREGFVLASDLHLVYLSTPINVE 1073
P LG A F + P+E+ + DL S +G + AS HL+++ TP
Sbjct: 654 IPRVPGKISPSDLGNAVFNAGFDPDEATRLHADLVSSLNQGVIFASHFHLLFIITPYEQV 713
Query: 1074 VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLE 1133
+W+L+ + L + ++ + + G+ E +++ +
Sbjct: 714 CNINWDLFLLMYNALPSSERKLLAECGLEEKFILE----------------------AII 751
Query: 1134 YRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAG 1193
R+ +T A T R+ R Y+AL+L ++ P+ V E F V +G +QA +++
Sbjct: 752 TRVDLT-------AGTPRM--RLYIALMLQKIWNHEPMYTVAERFGVEKGWLQATLQSSI 802
Query: 1194 RFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGL 1252
A+ ++ F E++ + L L+ + R+S + E++ L T+ +K +RA L+KAG
Sbjct: 803 SQAASIAKFSEKITTMWPLRKLLPELVQRLSEAAQPELLPLMTVDGIKKARAAILFKAGY 862
Query: 1253 RTPLAIAEASISEIVKAL-----FESSSWIAEAQRRVQLGVAKKIK 1293
+T IA A+ ++V+ L +++S IA A+ ++ V +K++
Sbjct: 863 KTVGMIARANPLKLVQELGTIRMAQANSIIASARMVLRDQVDEKME 908
>gi|149046781|gb|EDL99555.1| rCG37823, isoform CRA_d [Rattus norvegicus]
Length = 714
Score = 363 bits (931), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 239/702 (34%), Positives = 376/702 (53%), Gaps = 88/702 (12%)
Query: 597 LGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDEL 651
LG V Y G++G P + S+ + TIEK +SLVN ++E GR+ +G++V+DEL
Sbjct: 12 LGFFVEEYAGSKG--RFPPIKRREKKSLYIATIEKGHSLVNALIETGRMGTLGLVVVDEL 69
Query: 652 HMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPN 711
HM+ + +RG LE+ L K+ Y TS ++ QI+GMSAT+ N
Sbjct: 70 HMIGEGSRGATLEMTLAKVLY-----TSKTT------------------QIIGMSATLNN 106
Query: 712 VAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGK-------- 763
V + +L+A Y + FRPV L+E++KV + IY V + + L K
Sbjct: 107 VEDLQAFLKAEYYTSQFRPVELKEFLKVNDTIYEVDSRAVDGMTFSRLLNYKYSDALKKV 166
Query: 764 DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSA 823
DPD +V L EV+ +S L+FC S+K CE+ A + KFL + +N H + +
Sbjct: 167 DPDRLVALVTEVIPN-YSCLVFCPSKKNCENVAEMLCKFLSRDYLN-HREEEK----GEL 220
Query: 824 IDALRRCPAG-LDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAG 882
I +LR G + PVL+ T+P GVAYHH+GLT +ER+++E Y G++ + T TSTLAAG
Sbjct: 221 IKSLRNVGHGKVCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAG 280
Query: 883 VNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLN 942
VNLPARRVI R P + F+ +Y+QM GRAGR GIDT GES+L+ + ++ ++++GL+N
Sbjct: 281 VNLPARRVILRAPYVANTFLKRNQYKQMIGRAGRAGIDTAGESILLLQEKDKQQVLGLIN 340
Query: 943 ESCPPLHSCLSED-KNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQ 1001
HS L E+ G+ L ++ I ++ DI++++ TL + KS
Sbjct: 341 GPLEDCHSHLVEEFTKGIQSLFLSLIGLKIAESLGDIYQFMNGTLFGVQQKTLLREKSLW 400
Query: 1002 D----SLRWLCHRKFLEWN-----EDTKL-YSTTPLGRAAFGSSLCPEESLIVLDDLSRA 1051
+ +L L + L+ + E+++ + T LG+A+F ++ + DL +
Sbjct: 401 EVTVGALEHLTEKGLLQKDSHGSPEESRCHFRITKLGQASFKGAIDLTYCDTLYRDLKKG 460
Query: 1052 REGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRM 1109
EG VL S LHLVYL+TP ++ + EPDW +Y+ +F +LS +QSV +G+SE ++ R
Sbjct: 461 LEGLVLESLLHLVYLTTPYDLAAQSEPDWMVYFRQFSQLSPAEQSVATLLGISESFIGRK 520
Query: 1110 AHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQET 1169
A G +R K D R Y++ +L L++ET
Sbjct: 521 ASGQAIR---KKVDKN--------------------------AVNRLYLSFVLYSLLKET 551
Query: 1170 PVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRA 1228
V V E F + RG +Q L A F+S V FCE L ++ + L+ + ++++ V+A
Sbjct: 552 NVWSVSERFNMPRGYIQNLLMGAASFSSCVLHFCEELEEFWVYKALLTELTKKLTYCVKA 611
Query: 1229 EIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
E++ L + V RA+ LY AG R+ + +A A+ +VK +
Sbjct: 612 ELIPLMEVTGVLEGRAKQLYSAGYRSVVHLANANPEVLVKTI 653
>gi|444723234|gb|ELW63893.1| Helicase POLQ-like protein [Tupaia chinensis]
Length = 1018
Score = 362 bits (930), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 262/821 (31%), Positives = 407/821 (49%), Gaps = 157/821 (19%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 304 LPSKVRDLYVQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 363
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 364 CRRKDVLMILPYVAIVQEKISGLSNFGIELGFFVEEYAGSKG--RFPPIKRREKKSLYIA 421
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E R+S +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 422 TIEKGHSLVNSLIENERISSLGLVVVDELHMIGEGSRGAILEMTLAKVLY-----TSKTT 476
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + ++LQA Y + FRPV L+EY+K+ +
Sbjct: 477 ------------------QIIGMSATLNNVEDLQEFLQAEYYTSQFRPVELKEYLKINDT 518
Query: 743 IYS------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY M R + + L DPDH+V L EV+ +S L+FC S+K CE+
Sbjct: 519 IYEVDSKAENGMTFSRLLDYKYSDALKKMDPDHLVALVTEVIP-NYSCLVFCPSKKNCEN 577
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL K + + + I L+ G L PVL+ T+P GVAYHH+GL
Sbjct: 578 VAEMICKFLSKEYLKQREKEKQ-----ELIKNLKHIGNGHLCPVLKRTVPFGVAYHHSGL 632
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + ++F+ +Y+QM GR
Sbjct: 633 TSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGR 692
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQ 973
AGR GIDT GES+LI + ++ ++I L + I + G
Sbjct: 693 AGRAGIDTVGESILILQEKDRQQIATNLGD-------------------IFHFMNGTFFG 733
Query: 974 TAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTK-------LYSTTP 1026
+ I LL ++ V +SLR+L + L+ + + K + T
Sbjct: 734 VQQKI-------LLKEKSLWEVTV----ESLRYLTEKGLLQKDINDKSEEEFQCAFRITK 782
Query: 1027 LGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYER 1084
LGRA+F ++ + DL + EG VL + LHLVYL+TP ++ + PDW +Y+ +
Sbjct: 783 LGRASFKGTIDLAYCDTLYKDLKKGLEGLVLENLLHLVYLTTPYDLVSQCVPDWMIYFRQ 842
Query: 1085 FLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNML 1144
+D+ + N++ +S + +S K + +G N+L
Sbjct: 843 -----KVDKDIVNRLYLSFVLYTLLKETNVWSVSEKF-NMPRGY-----------IQNLL 885
Query: 1145 SDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCE 1204
+ A + C VL CE L+E
Sbjct: 886 TGAASFSSC-----------------VLHFCE----------ELEE-------------- 904
Query: 1205 RLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIS 1264
++ L+ + ++++ V+AE++ L + V RA+ LY AG ++ +A AS
Sbjct: 905 ---FWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLTHLANASPE 961
Query: 1265 EIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
+++ I RR AK+I + A+ ++ EKAE
Sbjct: 962 VLIRT-------IDHLSRR----QAKQIVSSAKMLLQEKAE 991
>gi|407044700|gb|EKE42769.1| DEAD/DEAH box helicase domain containing protein [Entamoeba nuttalli
P19]
Length = 848
Score = 362 bits (929), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 224/815 (27%), Positives = 413/815 (50%), Gaps = 102/815 (12%)
Query: 517 YKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
Y+K+GI +L+ WQVECL GV + NLVY A TS+GK+ V+EILM+ R T K +
Sbjct: 87 YEKKGIQELFEWQVECLKEKGVREGTENLVYSAPTSSGKTLVSEILMIERYCQTQKKMIY 146
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRML 635
++PYVS+ EK E+ + + + + +++ Y+ N+ + K+ + +CTIEK N ++N+++
Sbjct: 147 IVPYVSMAQEKEEYFQEIFKSIKINIKGYFQNR---VIDKEFDIGICTIEKGNGIINKLI 203
Query: 636 EEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKAD 695
EE + E+ +I+IDE+HM+ D+ RG ++E ++ K+
Sbjct: 204 EEKSIEEVSLIIIDEIHMIFDKRRGQIIEKIINKI-----------------------TS 240
Query: 696 PAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTIL 755
+QI+GMSAT+ N++ W++A Y++ +RP+ +EEYI + +K+ ++ R I
Sbjct: 241 IERKIQIIGMSATIGNISIFEKWIKAKTYQSTYRPIKIEEYIVCKGKVINKEGEIKRVIK 300
Query: 756 TAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDS 815
G D ++I+ + +E +E V+ FCS++KGCE + + K LKK + +
Sbjct: 301 -----GEGDIENIISIMEEAKKERKGVICFCSTKKGCERMGKEIVKILKKRRKEEMNKEI 355
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
E I I + R G++ ++ + G+ YHH+G+T EER+++E ++KG++ ++ A
Sbjct: 356 EEQRI-EMIKEMERSKFGIEEEFQDMIRYGIVYHHSGITNEERQIIEKSFKKGIITLIIA 414
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVK 935
TSTLA GVNLPA RVIF +P+IG++++ +Y+QM+GRAGR GID KGES + CK E+
Sbjct: 415 TSTLALGVNLPASRVIFDKPKIGKEYLTNVQYQQMSGRAGRFGIDEKGESYIFCKEGEIS 474
Query: 936 KIMGLLNESCPPLHSCLSEDKNGMTHA-ILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQ 994
+ L+ + + E + ILE + GI++ +DI +++ TL T
Sbjct: 475 IVKNLMKVTNENKEIEIEEKEEIQEKEDILEGIYNGIIENKKDIEKWIEKTLYWYT---- 530
Query: 995 DVVKSAQDSLRWLCHRKFLE----------------WNEDTKLYSTTPLGRAAFGSSLCP 1038
+K + + W +K+ E K +GRA +
Sbjct: 531 --IKEKEGAEEW--KKKYSEKMIEILKHDGMIEEIEEEGGEKKIKCNQIGRATVKGGMGI 586
Query: 1039 EESLIVLDDLSRAREGF----VLASDLHLVYLSTPINVEVEPDWELYYERFLELSALD-- 1092
+ S + +++ EG+ ++ D++ +YL IN E E +W + ++ ++ +
Sbjct: 587 KFSKEIYFNIN---EGYLKNNIINKDVYYLYLG--INNEYEINWNCFEKKVEDIEDIKNK 641
Query: 1093 --------QSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNML 1144
Q + +G++ ++ M +++++
Sbjct: 642 NNKEYQDCQELMKSIGINPVFICYMESMKKVKLTN------------------------- 676
Query: 1145 SDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCE 1204
+ + + K++Y +IL ++ E ++++ ++RG++Q LQ N +M+ F
Sbjct: 677 DIIKKIEIHKKYYYFIILYEIIHEKNIIQIINEMGISRGVLQQLQNNTITTLNMIIQFSN 736
Query: 1205 RLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIS 1264
L +DL + +R+ FGV ++IV + I + AR L G IA AS
Sbjct: 737 ELHNFDLSFHLKVLIDRIKFGVCSDIVHIIQIDGITKEIARKLIVFGFNDISKIAHASFL 796
Query: 1265 EIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKI 1299
+I + S+ + +Q ++ L + ++I A++I
Sbjct: 797 DIFSLIHHLSTSHSLSQLQIDLELTQRIIQSAQEI 831
>gi|340519993|gb|EGR50230.1| predicted protein [Trichoderma reesei QM6a]
Length = 907
Score = 361 bits (927), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 253/838 (30%), Positives = 404/838 (48%), Gaps = 146/838 (17%)
Query: 490 AGTPSSSGMLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLVYC 547
A TPSSS + L + LP ++ + GI ++YPWQ CL G+L +NLVYC
Sbjct: 117 AATPSSSIDPELSLAHPVYKLPPQLVHNFASLGIKQIYPWQKSCLKGPGLLTGDKNLVYC 176
Query: 548 ASTSAGKSFVAEILMLRRLISTGKM-ALLVLPYVSICAEKAEHLEVLLEPLGRHV----- 601
A T GKS VA++LMLRR+I + ALL+LPYV++ EK L +++ L ++
Sbjct: 177 APTGGGKSLVADLLMLRRIIEEPETKALLILPYVALVQEKVRWLRTVVQGLAPNIDPGVL 236
Query: 602 -----------RSYYGNQ------GGGSLP---KDTSVAVCTIEKANSLVNRMLEEGRLS 641
R +G+ GGG + +D + +CT+EK +
Sbjct: 237 EKQKANSIWRLRPDHGSLRVVGFFGGGKIRSTWQDFDIGICTLEKLRA------------ 284
Query: 642 EIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQ 701
+V+DELHM+ D +RGYLLEL+ TKL +Q
Sbjct: 285 ----VVLDELHMIDDDHRGYLLELIATKL-----------------------LSLEQPIQ 317
Query: 702 IVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS---------KKMDV-- 750
I+GMSAT+PN VA WL A YET +RP+P+EE++ +Y K + V
Sbjct: 318 IIGMSATLPNANLVAQWLNAHSYETRYRPIPIEEHLVCEGKVYHIGTNGATAHKHIKVEE 377
Query: 751 --------VRTILTAANLGGKDP--DHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVS 800
R I + + +DP + +V L E G+ LIF SR CES AR +S
Sbjct: 378 ISQGQVIPTRHIEASDHKEFRDPVLNAVVSLAYETAMMGYGSLIFAGSRSICESDARLIS 437
Query: 801 KFLKKFSINVHSSDSEFIDI-TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
+ + + H DS +D + LR G DPVLEET+ SGVA+H L EER+
Sbjct: 438 RVMPQ----PHDLDSATMDKRMDLLSELRSLSTGADPVLEETVLSGVAFHRTSLAFEERD 493
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
++ PARRVI R+GR+++ + RQM GRAGR G
Sbjct: 494 LIAEA---------------------PARRVILHNARMGREYVGPSMLRQMRGRAGRQGK 532
Query: 920 DTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIH 979
GE+ L C+ +++++++ L+ P + SCL+ + + AILEV++ + + + +
Sbjct: 533 SPVGETYLCCRQDDLEQVLDLMYADIPEIASCLNTENKRVQRAILEVISVRLANSHDSLL 592
Query: 980 RYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPE 1039
Y +L++ T + V + L + H L N+ ++ T LGRA SS+ P
Sbjct: 593 DYFSKSLISYTHDREFVETCLRSGLEEI-HDLGLIVNDSYSSFTATQLGRAIVASSVDPY 651
Query: 1040 ESLIVLDDLSRAREGFVLASDLHLVYLSTPI-NVEVEPDWELYYERFLELSALDQS---V 1095
+ + + +L++ + FV+ ++H++Y+ TP+ + + +W+++ E+ ALD+S V
Sbjct: 652 DGVFIHAELTKTLKAFVMDGEMHILYVFTPVQDFGIVVNWQVFRN---EMDALDESGLRV 708
Query: 1096 GNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKR 1155
+G+ +++ A G P++ S+ + + RV +R
Sbjct: 709 LRFLGIKPTDVLKFARGVPLKESTP------------------------EEKELARVYRR 744
Query: 1156 FYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLI 1215
FY+AL L L E P+ V + RG VQ L + FA+ + FCE++GW + +
Sbjct: 745 FYLALQLRDLCNEMPIHVVARKYDSPRGSVQTLAQTCQGFAAGMIKFCEQMGWGVMAAAL 804
Query: 1216 AKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFES 1273
F +R+ G R +++ L IP++K AR ++ G RT AIA A E+V L ++
Sbjct: 805 EHFSDRLMAGARTDLLALAKIPFIKSRTARVFWENGYRTVGAIANADPKELVLVLMQA 862
>gi|24660651|ref|NP_648178.1| mutagen-sensitive 301 [Drosophila melanogaster]
gi|7295156|gb|AAF50481.1| mutagen-sensitive 301 [Drosophila melanogaster]
gi|108385045|gb|AAR82756.2| RE48845p [Drosophila melanogaster]
Length = 1051
Score = 361 bits (926), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 268/852 (31%), Positives = 413/852 (48%), Gaps = 136/852 (15%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
I + +GI+ LY WQ ECL++ + QR+NL+Y TS GK+ VAEILMLR L+ + L
Sbjct: 255 ILEHKGINSLYEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLF 314
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
+LPYVSI EK + L V Y G G P K S+ + +IEK L
Sbjct: 315 ILPYVSIVQEKVSAMSPFAIDLDFIVEEYTA--GKGKCPPQPRRKRRSLFIASIEKGAVL 372
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
++ +++ R EIG++V+DELH++ ++ RG LE LTK+ +
Sbjct: 373 MDSLIDVQRPHEIGLVVVDELHLIGEKGRGATLEAFLTKVMFLNA--------------- 417
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY--SKKM 748
+QIVGMSAT+ N++ ++ +L A +Y FRPV L+EYIK G + +
Sbjct: 418 --------NIQIVGMSATIGNLSEISSFLNADVYTRGFRPVELKEYIKCGPDLLEINSAG 469
Query: 749 DVVRTILTAAN---------LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
+ I + + DPDH+ L E E H L+FC SRK CE+ A +
Sbjct: 470 QTLEEIFVPSRSVEYNYSEAVKRADPDHLAGLISECAPE-HCCLVFCPSRKNCENVALLL 528
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
S+ + K H SE +D+ +DAL + L PVL +TLP G+AYHH+GLT +ER+
Sbjct: 529 SRIVPKHKFFEHRR-SEKLDL---MDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERK 584
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
+ET YR G+V V+ TSTLAAGVNLPA+RVI R P +G++F+ +Y+QM GRAGR G+
Sbjct: 585 YIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRAPYVGQEFLTLCKYKQMVGRAGRAGL 644
Query: 920 DTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSE-DKN---GMTHAILEVVAGGIVQTA 975
GES+LI + ++ + +L P+ LS D+N G+ IL VV + +
Sbjct: 645 GEAGESILIAQSKDNLLVGQML---FSPMDKALSSLDQNEAVGLQSLILSVVGLNLAECR 701
Query: 976 EDIHRYVRCTLLN-STKPFQDVVKS-AQDSLRWLCHRKFLEWNE---------------- 1017
D++R V TLL+ K + V LR + K L+ E
Sbjct: 702 RDLNRLVNSTLLSVQAKSLEVAVNEIVLRILREMFKNKVLQLAEPQAKSKINSSDIITSQ 761
Query: 1018 ----------DTKL-------YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD 1060
D +L + T +GRAAF + + + + + +L +A++ +L +
Sbjct: 762 DVSQANRPAGDRRLLIGQSTPFKLTNIGRAAFKAGIDYKRANAIHKELKQAQQQLILTNY 821
Query: 1061 LHLVYLSTPINV-----EVEP-DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAP 1114
LHL+YL N E+ P D + + + L Q++ Q+G +E + R+
Sbjct: 822 LHLLYLVVCFNSNERGDELFPADASILFGVYTSLPLDSQAMFKQLGFTEAHAARLF---- 877
Query: 1115 MRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEV 1174
T+ + G L +L R Y LIL+ ++ P+ V
Sbjct: 878 ---------KTQSVQGPLSLQLN-----------------RLYKVLILADILNLLPIPSV 911
Query: 1175 CETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVEL 1233
+ V RG +Q L + AS + CE L ++ + L + +++ E+ L
Sbjct: 912 ASKYNVERGTLQHLISQSTAAASAIVRLCEELEEFWCYKPLFERILHKMDRCGTFELEPL 971
Query: 1234 TTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIK 1293
+P VK +RAR LY AG +T IA S +V++L + L VA +I
Sbjct: 972 MELPAVKINRARQLYAAGFQTIGDIARVRPSHLVQSL-----------EHMPLRVATEIV 1020
Query: 1294 NGARKIVLEKAE 1305
+ A+ I+++K +
Sbjct: 1021 SAAKIILMKKLD 1032
>gi|195325899|ref|XP_002029668.1| GM25023 [Drosophila sechellia]
gi|194118611|gb|EDW40654.1| GM25023 [Drosophila sechellia]
Length = 1050
Score = 360 bits (925), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 268/850 (31%), Positives = 412/850 (48%), Gaps = 136/850 (16%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
I + +GI LY WQ ECL++ + QR+NL+Y TS GK+ VAEILMLR L+ + L
Sbjct: 254 ILEHKGIKSLYEWQNECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLF 313
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
+LPYVSI EK + L V Y G G P K S+ + +IEK L
Sbjct: 314 ILPYVSIVQEKVSAMSPFAIDLDFIVEEYTA--GKGKCPPQPRRKRRSLFIASIEKGAVL 371
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
++ +++ R EIG++V+DELH++ ++ RG LE LTK+ +
Sbjct: 372 MDSLIDVQRPHEIGLVVVDELHLIGEKGRGATLEAFLTKVMFLNA--------------- 416
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY--SKKM 748
+QIVGMSAT+ N++ ++ +L A +Y FRPV L+EYIK G + +
Sbjct: 417 --------NIQIVGMSATIGNLSEISSFLNADVYTRGFRPVELKEYIKCGPDLLEINSAG 468
Query: 749 DVVRTILTAAN---------LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
+ I + + DPDH+ L E E H L+FC SRK CE+ A +
Sbjct: 469 QTLEEIFVPSRSVEYNYSEAVKRADPDHLAGLISECAPE-HCCLVFCPSRKNCENVALLL 527
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
S+ + K H SE +D+ +DAL + L PVL +TLP G+AYHH+GLT +ER+
Sbjct: 528 SRIVPKHKFFEHRR-SEKLDL---MDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERK 583
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
+ET YR G+V V+ TSTLAAGVNLPA+RVI R P +G++F+ +Y+QM GRAGR G+
Sbjct: 584 YIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRAPYVGQEFLTLCKYKQMVGRAGRAGL 643
Query: 920 DTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSE-DKN---GMTHAILEVVAGGIVQTA 975
GES+LI + ++ + +L P+ LS D+N G+ IL VV + +
Sbjct: 644 GEAGESILIAQSKDNLLVGQML---FSPMDKALSSLDQNEAVGLQSLILSVVGLNLAECR 700
Query: 976 EDIHRYVRCTLLN-STKPFQDVVKS-AQDSLRWLCHRKFLEWNE---------------- 1017
D++R V TLL+ K + V LR + K L+ E
Sbjct: 701 RDLNRLVNSTLLSVQAKSLEVAVDEIVLRILREMFKNKVLQLAEPQAKSKINSSDIITSQ 760
Query: 1018 ----------DTKL-------YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD 1060
D +L + T +GRAAF + + + + + +L +A++ +L +
Sbjct: 761 DASQANRPAGDRRLLIGQSTTFKLTNIGRAAFKAGIDYKRANAIHKELKQAQQQLILTNY 820
Query: 1061 LHLVYLSTPINV-----EVEP-DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAP 1114
LHL+YL N E+ P D + + + L Q++ Q+G +E + R+
Sbjct: 821 LHLLYLVVCFNSNERGDELFPADASILFGVYTSLPLDSQAMFKQLGFTEAHAARLF---- 876
Query: 1115 MRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEV 1174
T+ + G L +L R Y LIL+ ++ P+ V
Sbjct: 877 ---------KTQSVQGPLSLQLN-----------------RMYKVLILADILNLLPIPSV 910
Query: 1175 CETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVEL 1233
+ V RG +Q L + AS + CE L ++ + L + +++ E+ L
Sbjct: 911 ASKYNVERGTLQHLISQSTAAASAIVRLCEELEEFWCYKPLFERILHKMDRCGTFELEPL 970
Query: 1234 TTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIK 1293
+P VK +RAR LY AG +T IA S++V++L + L VA +I
Sbjct: 971 MELPAVKINRARQLYAAGFQTIGDIARVRPSQLVQSL-----------EHMPLRVATEIV 1019
Query: 1294 NGARKIVLEK 1303
+ A+ I+++K
Sbjct: 1020 SAAKIILMKK 1029
>gi|195492753|ref|XP_002094126.1| GE21661 [Drosophila yakuba]
gi|194180227|gb|EDW93838.1| GE21661 [Drosophila yakuba]
Length = 1052
Score = 360 bits (923), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 263/852 (30%), Positives = 409/852 (48%), Gaps = 136/852 (15%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
I + +GI+ LY WQ ECL++ + QR+NL+Y TS GK+ VAEILMLR L+ + L
Sbjct: 256 ILEHKGINSLYEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLF 315
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
+LPYVSI EK + L V Y G G P K S+ + +IEK L
Sbjct: 316 ILPYVSIVQEKVSAMSPFAIDLDFIVEEYTA--GKGKCPPQPRRKRRSLFIASIEKGAVL 373
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
++ +++ R EIG++V+DELH++ ++ RG LE LTK+ +
Sbjct: 374 MDSLIDVQRPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNA--------------- 418
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY--SKKM 748
+QIVGMSAT+ N++ ++ +L A +Y FRPV L+EYIK G + +
Sbjct: 419 --------NIQIVGMSATIGNLSEISSFLNADVYTRGFRPVELKEYIKCGPDLMEINSSG 470
Query: 749 DVVRTILTAAN---------LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
+ I + + DPDH+ L E E H L+FC SRK CE+ A +
Sbjct: 471 QTLEEIFVPSRSVDYNYSEAVKRADPDHLAGLISECAPE-HCCLVFCPSRKNCENVALLL 529
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
S+ + K H SE +D+ +DAL + L PVL +TLP G+AYHH+GLT +ER+
Sbjct: 530 SRIVPKQKFFEHRR-SEKLDL---MDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERK 585
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
+ET YR G+V V+ TSTLAAGVNLPA+RVI R P +G++F+ +Y+QM GRAGR G+
Sbjct: 586 YIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRAPYVGQEFMTLCKYKQMVGRAGRAGL 645
Query: 920 DTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGIVQTA 975
GES+LI + ++ + +L P+ LS ++ G+ IL VV + +
Sbjct: 646 GEAGESILIAQSKDNLLVGQML---FSPMDKALSSLDQQEAVGLQSLILSVVGLNLAECR 702
Query: 976 EDIHRYVRCTLLNSTKPFQDVV--KSAQDSLRWLCHRKFLEWNE---------------- 1017
D++R V TLL+ DV + LR + K L+ E
Sbjct: 703 RDLNRLVNSTLLSVQAKSLDVAVDEIVLRILREMFKNKVLQLTEPPAKSKINSSDIITSQ 762
Query: 1018 -----------------DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD 1060
+ + T +GRAAF + + + + + +L +A++ +L
Sbjct: 763 DVSQTNRPAGERRLLIGQSTPFKLTNIGRAAFKAGIDYKRANAIHKELKQAQQQLILTHY 822
Query: 1061 LHLVYLSTPINV-----EVEP-DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAP 1114
+HL+YL N E+ P D + + + L Q++ Q+G +E + R+
Sbjct: 823 MHLLYLVVCFNSNERGDELFPADASILFGVYTSLPLDSQALFQQLGFTEAHAARLF---- 878
Query: 1115 MRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEV 1174
T+ + G L +L R Y LIL+ ++ P+ V
Sbjct: 879 ---------KTQSVQGPLSLQLN-----------------RLYKVLILADILNLLPLPSV 912
Query: 1175 CETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVEL 1233
+ V RG +Q L + AS + CE L ++ + L + N++ E+ L
Sbjct: 913 ASKYNVERGTLQHLISQSTAAASAIVRLCEELEEFWCYKPLFERILNKMDRCGTFELEPL 972
Query: 1234 TTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIK 1293
+P VK +RAR LY AG +T IA + +V++L + L VA +I
Sbjct: 973 MELPAVKINRARQLYAAGFQTIEDIARVKPTHLVQSL-----------EHMPLRVATEIV 1021
Query: 1294 NGARKIVLEKAE 1305
+ A+ I+++K +
Sbjct: 1022 SAAKIILMKKLD 1033
>gi|432095312|gb|ELK26532.1| Helicase POLQ-like protein [Myotis davidii]
Length = 965
Score = 358 bits (919), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 241/726 (33%), Positives = 382/726 (52%), Gaps = 99/726 (13%)
Query: 597 LGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDEL 651
LG V Y G++G P + S+ + TIEK + LVN ++E GR+S +G++V+DEL
Sbjct: 300 LGFFVEEYAGSKG--KFPPIKRREKKSLYIATIEKGHGLVNSLIETGRISSLGLVVVDEL 357
Query: 652 HMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPN 711
HM+A+ +RG +LE+ L K+ Y TS ++ QI+GMSAT+ N
Sbjct: 358 HMIAEGSRGAVLEMTLAKILY-----TSKTT------------------QIIGMSATLNN 394
Query: 712 VAAVADWLQAALYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTILTAAN------LGGK 763
V + ++LQA Y + FRPV L+EY+K+ +AIY K + T N L
Sbjct: 395 VEDLQEFLQAEYYTSQFRPVELKEYLKINDAIYEVDSKAENGMTFSRLLNYKYSDALKKM 454
Query: 764 DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSA 823
DPDH+V L EV+ +S L+FC ++K CE+ A + KFL+K + + +
Sbjct: 455 DPDHLVALVTEVIP-NNSCLVFCPTKKNCENVAEMICKFLRKDYLKHREKEKQ-----EV 508
Query: 824 IDALRRCPAG-LDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAG 882
I L+ +G L P+L+ T+P GVAYHH+GL +ER+++E Y G++ +LT TSTLAAG
Sbjct: 509 IKNLKSISSGNLCPILKRTIPLGVAYHHSGLMSDERKLLEEAYSTGVLCLLTCTSTLAAG 568
Query: 883 VNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLN 942
VNLPARRVI R P + ++F+ ++Y+QM GRAGR GID+ GES+LI + ++ ++I L
Sbjct: 569 VNLPARRVILRAPYVAKEFLKRSQYKQMIGRAGRAGIDSVGESILILQEKDKQQIATHLG 628
Query: 943 ESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQD 1002
+ ++ +S G+ IL T E + LL +D + +
Sbjct: 629 D----IYHFMSGTLFGVQQKILLKEKSLWEITVESLRYLTEKGLLQ-----KDTILTENG 679
Query: 1003 SLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLH 1062
+ K EW + + + T LGRA+F ++ I+ DL + EG VL S LH
Sbjct: 680 LTQKDASYKSEEWFQYS--FHITELGRASFKGTIDLAYCDILYRDLQKGLEGLVLESLLH 737
Query: 1063 LVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSK 1120
L+YL+TP ++ + +PDW +Y+ +F +LS +Q+V VGVSE Y+ + G ++ K
Sbjct: 738 LIYLTTPYDMASQCDPDWMIYFTQFNQLSPAEQNVAALVGVSENYIGKKVSGQAIK---K 794
Query: 1121 LRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKV 1180
D + R Y++ +L L++ET + V E F +
Sbjct: 795 TVDKD--------------------------IVNRLYLSFVLYALLKETSIWSVSEKFNM 828
Query: 1181 ARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYV 1239
RG +Q+L A F+ V FCE L ++ + L+ + ++++ V+AE++ L + V
Sbjct: 829 PRGYIQSLLTAAATFSCCVLHFCEELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGV 888
Query: 1240 KGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKI 1299
RA+ LY AG ++ +A A+ ++K I RR AK+I + A+ +
Sbjct: 889 LEGRAKQLYNAGYKSLAHLANANPEVLIKT-------IDHLSRR----QAKQIVSSAKML 937
Query: 1300 VLEKAE 1305
+ EKAE
Sbjct: 938 LHEKAE 943
>gi|154281325|ref|XP_001541475.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411654|gb|EDN07042.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 908
Score = 358 bits (919), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 238/779 (30%), Positives = 382/779 (49%), Gaps = 115/779 (14%)
Query: 548 ASTSAGKSFVAEILMLRRLI-STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYG 606
A T GKS +A++LML+R+I K A+LVLPYV++ EK + L ++E + ++V
Sbjct: 142 APTGGGKSLIADVLMLKRVIEDPAKRAILVLPYVALVQEKLKWLRRVVEGVDKNVDMPTT 201
Query: 607 NQGGGSLPK----DTSVAVCTI---EKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNR 659
S PK S+ V K + L G++V+DELHM+ D++R
Sbjct: 202 ADEASSAPKWRQPQKSIRVTGFFGGSKTRATWTDTDIAVSLMTWGVVVLDELHMLDDEHR 261
Query: 660 GYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWL 719
GYL+E+++TKL + +QIVGMSAT+ N +A WL
Sbjct: 262 GYLIEIMVTKLLLLQQD-----------------------IQIVGMSATLSNTEVLAKWL 298
Query: 720 QAALYETNFRPVPLEEYIKVGNAIY--SKKMDVVRTIL------TAAN------------ 759
A Y + +RP+P++E++ NAIY + + RT + ++ N
Sbjct: 299 HANYYISKYRPIPIQEHLVYNNAIYPATSSKEFFRTAMQLNKPDSSPNYSLACRIIDRSM 358
Query: 760 ---LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSE 816
LG + +V L E G+ L+FC SR+ C+S A VS + + +
Sbjct: 359 HKELGNPTSNAMVSLALETALSGYGALVFCGSRQACQSNAVLVSHAMPDETALDNDLLER 418
Query: 817 FIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTAT 876
+D+ + + +L P GLDPVL+ T+ GVA+HHAGLT EER+++ Y KG +RVL AT
Sbjct: 419 RMDLIAGLQSL---PCGLDPVLQMTVIKGVAFHHAGLTTEERDLIAEAYDKGTLRVLIAT 475
Query: 877 STLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKK 936
+LAAG+NLPARRVI R+GRD + RQM GRAGR G D GE+ L C+ ++++
Sbjct: 476 CSLAAGINLPARRVILCGARMGRDLVGPAMLRQMPGRAGRKGKDEVGETYLCCQKDDLEA 535
Query: 937 IMGLLNESCPPLHSCLSEDKNG----------------------MTHAILEVVAGGIVQT 974
+ LL P + S L+ +K G +T A+LE +A +V +
Sbjct: 536 VAELLEAEMPAIASGLTPEKRGIKRFPESTVDHPFVYLLQLMSELTRALLEAIATRLVSS 595
Query: 975 AEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGS 1034
E I+ YV CTLL ++ +L L ++ E + Y T LG+A S
Sbjct: 596 RESINEYVMCTLLYQNMEAAELFSMVDKTLEDLVDNGLVDL-EQAESYEPTRLGQAVVSS 654
Query: 1035 SLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI--NVEVEPDWELYYERFLELSALD 1092
SL PE+ + + +L RA + FV+ ++H+ Y+ P+ + + DW ++ + +++ LD
Sbjct: 655 SLSPEDGIFIHHELKRALKSFVMDGEMHIFYMFAPLQNSSPTDIDWSIFRD---QMNNLD 711
Query: 1093 QSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRV 1152
+S G+ ++ P+ S + D R+
Sbjct: 712 ES-----GIRA---LQFVGVVPV----------------------AQSGTRIKDETIARI 741
Query: 1153 CKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLE 1212
+R Y A L L E P+ + + + + RG VQ L + FA+ + FC+R+GW L
Sbjct: 742 YQRAYTAFQLRDLSNEVPISTIAQRYNIPRGNVQTLAQTCHGFAAGIVKFCQRMGWDMLA 801
Query: 1213 GLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
++ ++R+ G RA+++E+ + YVK AR L++ G ++ A+AEA ++V L
Sbjct: 802 VVLDHMRDRLHAGARADLLEMAQVAYVKSRTARLLWENGFKSLRALAEADPKDLVPVLM 860
>gi|302414602|ref|XP_003005133.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356202|gb|EEY18630.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 866
Score = 357 bits (915), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 242/792 (30%), Positives = 384/792 (48%), Gaps = 116/792 (14%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + + K GI +YPWQ CL G+L +NL+Y A T GKS VA++LML+R++
Sbjct: 115 LPRPLIHNFAKLGIHSIYPWQKACLLGPGLLIGEKNLIYSAPTGGGKSLVADVLMLKRVL 174
Query: 568 -STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEK 626
A+LVLPYV++ EK L +++ L + A +++
Sbjct: 175 EDKDAKAILVLPYVALVQEKVRWLRHIVDGLAK------------------VNAPPPVDE 216
Query: 627 ANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGEN 686
AN L R +E + +G G G S+ +
Sbjct: 217 ANRLWRRRADENTIRVVGFF----------------------------GGGKVQSTWAD- 247
Query: 687 SGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY-- 744
G +Q+VGMSAT+ N+ ++ WL YET +RPVP+EE++ + +Y
Sbjct: 248 --FDIGVCTIEKSMQVVGMSATLSNIRLLSTWLDGHSYETKYRPVPVEEHLVYESHVYPA 305
Query: 745 ---------------------SKKMDVVRTILTAANLGGKDP--DHIVELCDEVVQEGHS 781
S+ M +R I + + KDP + +V L E + G+
Sbjct: 306 ATTSELLKTANQLKNVSQPTQSEAM-AIRRIEPSVHRELKDPVVNSVVALAAETARAGYG 364
Query: 782 VLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEET 841
L+F SR CE+ A+ +++ L + + F + LR GLD LEET
Sbjct: 365 ALVFAGSRGACETDAKLIARVLPQ---QEEVEPTLFDKRVGLLAELRSLSTGLDAALEET 421
Query: 842 LPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDF 901
+PSGVA+H LT EERE++ Y G+++V AT +LAAG+NLPARRVI R+GRDF
Sbjct: 422 IPSGVAFHR--LTTEERELIANAYDMGVLKVCVATCSLAAGINLPARRVILHNARMGRDF 479
Query: 902 IDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTH 961
+ + RQM GRAGR G D GE+ L C+ +++++++ L++ P L S L+ DK +
Sbjct: 480 VGPSMLRQMRGRAGRKGKDEVGETYLCCRKDDLEQVVDLMHSEMPQLTSGLNSDKQRIQR 539
Query: 962 AILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKL 1021
A+LEV+A + + + I Y TLL T V K Q SL L F+E +
Sbjct: 540 ALLEVIAIRLATSRDSIDDYAAKTLLACTGDLALVRKCVQSSLDNLLSLNFVE-VDGLDG 598
Query: 1022 YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI-NVEVEPDWEL 1080
+ T LG+A S+L P++ + +L RA + FV+ ++H++Y+ TP+ + +W++
Sbjct: 599 FRPTQLGKAIVASALDPDDGTFIHKELQRALKAFVMDGEMHILYMFTPVQDYGTNINWQV 658
Query: 1081 YYERFLELSALDQSVGNQV----GVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
+ E+ ALD S G++V G+ + R+A G
Sbjct: 659 FRN---EMEALDDS-GHRVLGFLGLKRAVINRLAQG------------------------ 690
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
G+ + + +RV +RFY+AL L L E P+ V + V RG VQ L + FA
Sbjct: 691 GVLKESTAEEQDVIRVHRRFYMALQLRDLCNEMPIHVVARKYDVHRGAVQTLSQTCTGFA 750
Query: 1197 SMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPL 1256
+ + FCE++GW + + F +R+ G RA+++ L I ++K AR +++G R+
Sbjct: 751 AGMIKFCEQMGWGIMSAALDHFSDRLRAGARADLLALAKITFIKSRTARIFWESGYRSIA 810
Query: 1257 AIAEASISEIVK 1268
A+A A E+ +
Sbjct: 811 AVANADPRELAQ 822
>gi|321466793|gb|EFX77786.1| hypothetical protein DAPPUDRAFT_320958 [Daphnia pulex]
Length = 968
Score = 356 bits (913), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 273/818 (33%), Positives = 408/818 (49%), Gaps = 99/818 (12%)
Query: 515 SIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMAL 574
+I + +GI+ LY WQ CL+ + +NL+Y TS GK+ VAEILM+R L+ K L
Sbjct: 191 AIQQTKGINSLYNWQDICLN-KAIKTNQNLLYSLPTSGGKTLVAEILMVRELLCNQKHCL 249
Query: 575 LVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTS---VAVCTIEKANSLV 631
V+PYVSI EK L L L V Y GN+G K S + + T+EKAN +V
Sbjct: 250 FVMPYVSIVQEKIRTLSSLAIALNFAVEEYAGNRGSYPPRKRKSKRVIYIATLEKANGIV 309
Query: 632 NRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSS 691
N +LE GRL+EIG++V+DE+H+V + RG LE LL KL A
Sbjct: 310 NSLLELGRLNEIGLVVVDEIHIVGEGKRGATLETLLCKLLLA------------------ 351
Query: 692 GKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAI-------- 743
P G ++V MSAT+ N+ ++++L+A +Y +FRPV L E+IK G+ +
Sbjct: 352 ----PV-GPRLVAMSATIGNIDELSNFLKAEIYTEDFRPVQLREFIKTGDQVLEVSGRQR 406
Query: 744 -YSKKMDVVRTILT-AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSK 801
+ + R++ + +A DPD I L EV E H L+FCS++K CES A+ +S
Sbjct: 407 GFQENFKHCRSLSSPSAESRKNDPDGISVLVSEVAPE-HCCLVFCSTKKNCESVAKLISS 465
Query: 802 FLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVV 861
L + +++ + ++ R CP +L+ TLP G+AYHH+GLT +ER+++
Sbjct: 466 NLSPNLLQWKTAEKLKLRRALEQESGRLCP-----ILKSTLPFGIAYHHSGLTADERQLI 520
Query: 862 ETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDT 921
E + G + L TSTLAAGVNLPARRVI R P IG + RY+QM GRAGR G DT
Sbjct: 521 EEAFSSGTLCCLCCTSTLAAGVNLPARRVILRSPYIGNTRLTRARYQQMIGRAGRAGFDT 580
Query: 922 KGESMLICKPEEVKKIMG-LLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHR 980
GES +I KP E+ + +L + S L+ED N L + + D +
Sbjct: 581 HGESFMIVKPNELTFVTNDILMAPTNRVDSQLAED-NLRGLQQLLLSLISLDLGGRD-RK 638
Query: 981 YVRCTLLNSTKPFQDVVKS-------AQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFG 1033
+ TLL+ST Q + L+ + + + + +D KL T LGRA
Sbjct: 639 TLAETLLHSTLLGQQSTRQTITATELVDQGLKSMAEKNLILFGKDEKL-EVTKLGRATLK 697
Query: 1034 SSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSAL 1091
+ + S + +DL A+ G VL + LHL+YL TP ++ V P Y++ F +LSA
Sbjct: 698 GIVDLDRSKQLYNDLRLAQAGLVLMTKLHLMYLVTPYDMVGTVMPIASTYFQSFNKLSAE 757
Query: 1092 DQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLR 1151
+ V +G++E ++++ +I
Sbjct: 758 ELGVARTIGINETVMVKLMSNQQPKIERS------------------------------- 786
Query: 1152 VCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYD 1210
V +RFY+ L+L+ L + V V E + RG VQ L +A FAS V F + L ++
Sbjct: 787 VLERFYLTLMLNDLFKGESVWNVSELYGCTRGDVQNLLSSASSFASCVFHFVQELDEFWA 846
Query: 1211 LEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
L+ F +S AE++ L +P V RAR L+KAG RT +A+ + E+V
Sbjct: 847 FSDLLLPFSRELSMCCTAELIPLMELPSVGKGRARMLFKAGFRTLTDVAKTNPEELV--- 903
Query: 1271 FESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEEAR 1308
S + +R L ++ A+ +V EKA+ R
Sbjct: 904 ----SRVDHLPKRSAL----QMIAAAKVLVYEKADALR 933
>gi|355694423|gb|AER99664.1| helicase, POLQ-like protein [Mustela putorius furo]
Length = 650
Score = 355 bits (911), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 218/592 (36%), Positives = 332/592 (56%), Gaps = 63/592 (10%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL ++ V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 93 LPSKVRDLYVQFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELL 152
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 153 CRRRDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKG--KFPPIKRREKKSLYIA 210
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E GR+ +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 211 TIEKGHSLVNSLIETGRIGSLGLVVVDELHMIGEGSRGAILEMTLAKILY-----TSKTT 265
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + ++LQA Y + FRPV L+EY+K+ +A
Sbjct: 266 ------------------QIIGMSATLNNVEDLQEFLQAECYTSQFRPVELKEYLKINDA 307
Query: 743 IYS------KKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY M R + + L DPDH+V L EV+ +S L+FC ++K CE+
Sbjct: 308 IYEVDNKAENGMTFSRLLNCQYSDTLKKMDPDHLVALVTEVI-PNYSCLVFCPTKKNCEN 366
Query: 795 TARHVSKFL-KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGL 853
A + KFL K++ + E I +I CP +L+ T+P GVAYHH+GL
Sbjct: 367 VAEMICKFLSKEYLKHREKEKHELIKNLKSISGGNVCP-----ILKRTVPFGVAYHHSGL 421
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +ER ++E Y G + + T TSTLAAGVNLPARRVI R P + ++F+ ++Y+QM GR
Sbjct: 422 TSDERRLLEEAYSTGALCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRSQYKQMIGR 481
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GID+ GES+LI + ++ +++ L++ PL +C S E G+ L ++
Sbjct: 482 AGRAGIDSVGESVLILQEKDKQQVSELISR---PLENCYSHLVQEFTKGIQTLFLSLIGL 538
Query: 970 GIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQD-SLRW--------LCHRKFLEWNEDTK 1020
I +DI ++ TL + KS ++ ++ W L + ++ +D
Sbjct: 539 KIATNLDDICHFMGGTLFGVQQKILLKEKSLREITVEWLRDLTEKGLLQKDVVDKPKDES 598
Query: 1021 LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV 1072
+ T LGRA+F ++ I+ DL + EG VL S LHL+YL+TP ++
Sbjct: 599 -FHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDM 649
>gi|195127341|ref|XP_002008127.1| GI13326 [Drosophila mojavensis]
gi|193919736|gb|EDW18603.1| GI13326 [Drosophila mojavensis]
Length = 1022
Score = 354 bits (908), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 262/852 (30%), Positives = 416/852 (48%), Gaps = 140/852 (16%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
I++ +GI LY WQ ECL++ + +R+NL+Y TS GK+ VAEILMLR L+ + L
Sbjct: 226 IFEHKGIKSLYEWQDECLNLPAIHKRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLF 285
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
+LPYVSI EK + L V Y G G P K S+ V +IEK L
Sbjct: 286 ILPYVSIVQEKVSAMSPFAIALDFIVDEYTA--GKGKCPPQPQRKRRSLFVASIEKGAVL 343
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
++ +++ R EIG++V+DELH++ ++ RG LE LTK+ +
Sbjct: 344 MDSLIDAQRAHEIGMVVVDELHLIGERGRGATLEAFLTKVMFLKA--------------- 388
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS----- 745
+QIVGMSAT+ N+ ++ +L A +Y FRPV L+E+IK GN +
Sbjct: 389 --------NIQIVGMSATIGNLNEISSFLNADVYTRGFRPVELKEFIKCGNDLLEINSAG 440
Query: 746 KKMDVV----RTILT--AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
+ ++ + RT+ +A + DPDH+ L E E H L+FC +RK CE+ A +
Sbjct: 441 QTLEEIFVPSRTVNYNYSAAVERADPDHLAGLITECAPE-HCCLVFCPTRKNCENVALLL 499
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
S+ + K H SE D+ +DAL + L PVL +TLP G+AYHH+GLT +ER+
Sbjct: 500 SRIVPKQKFFQHRQ-SEKADL---MDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERK 555
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
+ET YR G++ V+ TSTLAAGVNLPA+RVI R P +G++F+ +Y+QM GRAGR G+
Sbjct: 556 YIETAYRFGVITVICCTSTLAAGVNLPAKRVIIRAPYVGQEFMTLCKYKQMVGRAGRAGL 615
Query: 920 DTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSE----DKNGMTHAILEVVAGGIVQTA 975
GES+LI + ++ + +L P+ LS + G+ IL V+ +
Sbjct: 616 GEAGESILITQSKDNALVGQML---FSPMDKALSSLDQFEAVGLQSLILSVIGLNLADCR 672
Query: 976 EDIHRYVRCTLLN----------------------------------STKPFQDVVKSAQ 1001
D++R V TLL +KP + + Q
Sbjct: 673 RDLNRLVNSTLLAVQAAALEVAVDELVLRILRDMFKNKVLQLRESAPKSKPNSSDIMTTQ 732
Query: 1002 D---SLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLA 1058
D S R R+ L ++ T+ + T +GRAAF + + + + + +L A++ +L
Sbjct: 733 DINQSGRSAPDRRLL-ISQSTR-FQLTSIGRAAFKAGIDYKRTFAIHKELQLAQQQLILT 790
Query: 1059 SDLHLVYLSTPINVE------VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHG 1112
S +HL+YL N + D + + + L A Q++ Q+G +E + ++A
Sbjct: 791 SYVHLLYLVVCFNSNERGDELIPADASILFREYNLLPAQTQALFKQLGFTEAHAAKLA-- 848
Query: 1113 APMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVL 1172
T+ + G L +L R Y LIL+ ++ P+
Sbjct: 849 -----------KTQSVQGPLALQLN-----------------RLYKVLILADVLSLHPLP 880
Query: 1173 EVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLEGLIAKFQNRVSFGVRAEIV 1231
+ + V RG +Q L + AS + CE++ ++ + L + +++ E+
Sbjct: 881 SIASKYNVERGTLQQLISQSTAAASAIVRLCEQIDEFWCFKPLFERINHKMDRCGTQELE 940
Query: 1232 ELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKK 1291
L +P VK +RA+ LY AG RT +A+ E+VKA+ + L VA +
Sbjct: 941 PLLELPAVKINRAKQLYAAGFRTIEDVAKTRPFELVKAV-----------EFMPLKVANE 989
Query: 1292 IKNGARKIVLEK 1303
I + A+ I+++K
Sbjct: 990 IISAAKIILMKK 1001
>gi|403302148|ref|XP_003941725.1| PREDICTED: DNA polymerase theta-like, partial [Saimiri boliviensis
boliviensis]
Length = 2294
Score = 354 bits (908), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 198/450 (44%), Positives = 267/450 (59%), Gaps = 39/450 (8%)
Query: 697 AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILT 756
++ +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E +KVGN+IY M +VR
Sbjct: 9 SNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLELVKVGNSIYDSSMKLVREFEP 68
Query: 757 AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSS--- 813
+ G D DH+V LC E + + HSVL+FC S+K CE A V++ N+H
Sbjct: 69 LLPVKG-DEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADIVAREF----YNLHHQAEG 123
Query: 814 ---DSEFI-------DITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVET 863
SEF D+ +D LRR P+GLD VL++T+P GVA+HHAGLT EER+++E
Sbjct: 124 LVISSEFPPVIQEQKDLLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEG 183
Query: 864 CYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKG 923
+R+GL+RVL ATSTL++GVNLPARRVI R P G +D Y+QM GRAGR G+DT G
Sbjct: 184 AFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTIG 243
Query: 924 ESMLICKPEEVKKIMGLLNESCPPLHSCLS-----EDKNGMTHAILEVVAGGIVQTAEDI 978
ES+LICK E K + LL S P+ SCL E M AILE++ GG+ T++D+
Sbjct: 244 ESILICKNSEKSKGIALLQGSLKPVCSCLQRREGEEVTASMIRAILEIIVGGVASTSQDM 303
Query: 979 HRYVRCTLL-NSTKPFQDVVKSAQDS---------LRWLCHRKFLEWNE-----DTKLYS 1023
H Y CT L S K + ++ Q+S + WL +F++ E + K+Y
Sbjct: 304 HTYADCTFLAASMKEGKQEIQKNQESAQVEAIEACVMWLLENEFIQITEASDGTEGKVYH 363
Query: 1024 TTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE-VEPDWELYY 1082
T LG A SSL P ++L + DL RA +GFVL +DLH+VYL TP+ + DW ++
Sbjct: 364 PTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHIVYLVTPVFEDWTTIDWYRFF 423
Query: 1083 ERFLELSALDQSVGNQVGVSEPYLMRMAHG 1112
+ +L + V VGV E +L R G
Sbjct: 424 CLWEKLPTSMKRVAELVGVEEGFLARCVKG 453
Score = 246 bits (628), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 177/535 (33%), Positives = 263/535 (49%), Gaps = 83/535 (15%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C +++LQ KL +E +AY
Sbjct: 1764 LNSLLQKENLQDVFCKVEMPSQYCLALLELNGIGFSTAECESQKHILQAKLDAIETQAYQ 1823
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHP 1818
LAG FS ++ DIA VL+ LKLP P G K G+Q
Sbjct: 1824 LAGHSFSFTSSDDIAEVLFLELKLP-PNGEMKNQGSKKTLGSTRRGSDSGRKLRLGRQF- 1881
Query: 1819 STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTS 1878
ST K L+ L+ HP+ +I E R + + + + R++ ++ Q+
Sbjct: 1882 STSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-VSQSH 1940
Query: 1879 TATGRLSMEEPNLQCVEHMVEFKM-----------------------SNEDIY----GGN 1911
TATGR++ EPN+Q V E KM N+ + G
Sbjct: 1941 TATGRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGKNKKGWSLNRGCQ 2000
Query: 1912 AEVDH--------CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP 1963
++D ++ R F+P ++LAADYSQ+ELR++AH S D LI +L+
Sbjct: 2001 TQMDERAADRGMPFSVSMRHAFVPF-PGGLILAADYSQLELRILAHLSHDCRLIQVLNT- 2058
Query: 1964 HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIK 2023
DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A I
Sbjct: 2059 GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYID 2118
Query: 2024 SFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQ 2083
SFKS + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQA+N+ Q
Sbjct: 2119 SFKSRYTGINQFMRETVKNCKRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTTVQ 2178
Query: 2084 GSAADIIKIAMINI-------HSIIVGGVYK------------PDSSLAANFQMLKGRCR 2124
GSAADI+KIA +NI HS ++ P L F ++G
Sbjct: 2179 GSAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDQTGLLPKRKLQGMFCPVRGGF- 2237
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+LQ+HD+L+ EV + + +V+ MESA L V L VK+++G++WG L+ F
Sbjct: 2238 FILQLHDKLLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDF 2292
Score = 66.6 bits (161), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 47/69 (68%)
Query: 1198 MVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
M++VF RLGW+++E L+++FQ R++FG++ E+ +L + + AR LY +G T
Sbjct: 473 MITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLIRVSLLNAQSARVLYASGFLTVAD 532
Query: 1258 IAEASISEI 1266
+A A+I+E+
Sbjct: 533 LARANIAEV 541
>gi|312083560|ref|XP_003143912.1| hypothetical protein LOAG_08332 [Loa loa]
Length = 811
Score = 354 bits (908), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 256/812 (31%), Positives = 410/812 (50%), Gaps = 106/812 (13%)
Query: 513 ICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGK 571
IC +Y+ R IS Y WQ +CL+ + ++ N++ T AGK+ VAEI+MLR I +
Sbjct: 70 ICEMYRNLRNISSFYDWQNQCLNDEHLISGTNMIISMGTGAGKTLVAEIVMLRETIFRRR 129
Query: 572 MALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEK 626
+LV+PYV+I EK L V + L V Y ++G LP K S+ V TIEK
Sbjct: 130 SCILVVPYVAIAQEKVYSLSVFEDKLNVCVEEYAASKG--RLPPIKRRKGESIYVATIEK 187
Query: 627 ANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGEN 686
AN L+N ++E R+ EIG++V+DELHM+ + RG ++E L K G
Sbjct: 188 ANMLINSLIELDRIDEIGVVVVDELHMIGENTRGAIIEQGLIKFMQKGRTG--------- 238
Query: 687 SGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY-- 744
QI+G+SAT+ NV ++ +L AA++ T FRP+ L E +K+ N++Y
Sbjct: 239 --------------QIIGLSATLSNVEQLSKFLSAAVFSTKFRPIKLVEKVKIDNSLYIV 284
Query: 745 --SKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKF 802
K++ L L +DPD +V L ++V + SVLIFC +++ CES + VS
Sbjct: 285 QPEGKLEF-EMCLGENKLRNRDPDGLVPLLRDIVPK-QSVLIFCPTKQNCESVCKAVSHL 342
Query: 803 LKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTVEEREVV 861
+ K NV + + + +A+ AL+ G +LE ++ GVAYHH+GLT +ER+++
Sbjct: 343 MPK---NVR--ERKKTERLAAVKALKSEEDGKFSSLLELSIMRGVAYHHSGLTADERKII 397
Query: 862 ETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDT 921
E ++ G++ ++ TSTLAAGVNLPARRVI + P +G++ I +Y QM GRAGR G D
Sbjct: 398 EGAFQDGIINIICCTSTLAAGVNLPARRVIIKAPLVGKEPIRKAQYLQMIGRAGRAGYDD 457
Query: 922 KGESMLICKP-EEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIV-QTAEDIH 979
GE++ I E K + +++ P +S L+E + +L++++ I+ QT I
Sbjct: 458 IGEAVTIVHSGYEESKFLDMISGPLPECNSSLNEPVM-FSSFLLDLISLKIIQQTLFGIQ 516
Query: 980 RYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSS---- 1035
LL ++ L +L + + D YS + G A F +S
Sbjct: 517 NNNSGELL-------------REMLEYLTKHDLVNIDTDGN-YSASIFGTAVFSASLSPL 562
Query: 1036 LCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSV 1095
L P+ ++ ++LS EG VL+S HL+++ P ++ V+ DW+++Y+ + L +Q++
Sbjct: 563 LAPQMCTLLSNNLS---EGVVLSSHFHLLFMMVPFDINVDIDWDVFYDEYKALPRSEQTL 619
Query: 1096 GNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKR 1155
++GV++ L+R P KL + L R
Sbjct: 620 LARLGVNDKQLVRCFIDRP-----KLNEGGSPL--------------------------R 648
Query: 1156 FYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGL 1214
Y++L+L RL ++ +V E F V RG +Q + + AS ++ F E++ ++ L L
Sbjct: 649 LYISLMLHRLWKQETFSDVAERFHVTRGWLQNVLQATCSQASSIARFAEKIPSFWPLRNL 708
Query: 1215 IAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESS 1274
+ + + E++ L + VK RAR LY AG +T IA A S +V
Sbjct: 709 LPDLVQHLRDCSQQELIPLLALDGVKRGRARQLYNAGFKTIGLIASADPSLLV------- 761
Query: 1275 SWIAEAQRRVQLGVAKKIKNGARKIVLEKAEE 1306
S I RR + + K R + EK EE
Sbjct: 762 STIDYLNRRQANAIIRSAKVLLRDQLAEKVEE 793
>gi|194750315|ref|XP_001957573.1| GF23962 [Drosophila ananassae]
gi|190624855|gb|EDV40379.1| GF23962 [Drosophila ananassae]
Length = 1049
Score = 353 bits (906), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 262/854 (30%), Positives = 415/854 (48%), Gaps = 144/854 (16%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
I + +GI LY WQ ECL++ + QR+NL+Y TS GK+ VAEILMLR L+ + L
Sbjct: 256 ILEHKGIKSLYEWQDECLNLPAIKQRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLF 315
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
+LPYVSI EK + L V Y G G P K S+ + +IEK L
Sbjct: 316 ILPYVSIVQEKVSAMSPFAIDLDFLVEEYTA--GKGKCPPQPRRKRRSLFIASIEKGAVL 373
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
++ +++ R EIG++V+DELH++ ++ RG LE LTK+ +
Sbjct: 374 MDSLIDVERPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNA--------------- 418
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN---AIYSKK 747
+QIVGMSAT+ N++ ++ +L A +Y FRPV L+EYIK G I+S+
Sbjct: 419 --------NIQIVGMSATIGNLSEISSFLNADVYTRGFRPVELKEYIKCGPDLLEIHSEG 470
Query: 748 MDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
+ + + + K DPDH+ L E E + L+FC SRK CE+ A +
Sbjct: 471 HTLEEIFVPSRTVDFKYSEAVKRADPDHLAGLVSECAPE-NCCLVFCPSRKNCENVALLL 529
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
S+ + K H SE +D+ +DAL + L PVL +TLP G+AYHH+GLT +ER+
Sbjct: 530 SRIVPKQKFFEHRR-SEKVDL---MDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERK 585
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
+ET YR G+V V+ TSTLAAGVNLPA+RVI R P +G++F+ +Y+QM GRAGR G+
Sbjct: 586 YIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRAPYVGQEFMTLCKYKQMVGRAGRAGL 645
Query: 920 DTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGIVQTA 975
GES+LI + + ++ +L P+ LS ++ G+ IL V+ + +
Sbjct: 646 GEAGESILIAQSRDNLQVGQMLFS---PMDKALSSMDQQEAVGLQSLILSVIGLNLAECR 702
Query: 976 EDIHRYVRCTLLNSTKPFQDVVKSAQDS-----LRWLCHRKFLEWNE-DTK--------- 1020
D++R V TLL+ D + A D LR + +K L+ +E D+K
Sbjct: 703 RDLNRLVDSTLLSVQA---DTLNVAVDKVVLLILREMFKKKVLQLSEPDSKSKIDCSEII 759
Query: 1021 -----------------------LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVL 1057
+ T +GRAAF + + +++ + +L +A++ +L
Sbjct: 760 TTQDANQSNRPAGERRLLIGQSTRFKLTSIGRAAFKAGIDYKKAQAIHKELKQAQQQLIL 819
Query: 1058 ASDLHLVYLSTPINVEVEPDWELY-------YERFLELSALDQSVGNQVGVSEPYLMRMA 1110
+ HL+YL N + D EL+ + + L Q++ Q+G +E + R+
Sbjct: 820 TNYSHLLYLVVCFNSNEKGD-ELFPANASILFRAYTSLPVESQALFKQLGFTEAHAARLL 878
Query: 1111 HGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETP 1170
T+ + G L +L R Y LIL +++ P
Sbjct: 879 -------------KTQSVQGPLSVQLN-----------------RLYKVLILEDVLELIP 908
Query: 1171 VLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLEGLIAKFQNRVSFGVRAE 1229
+ V + V RG +Q L + +S + CE + ++ + L + +++ E
Sbjct: 909 LPTVANKYNVERGTLQHLISQSIAASSAIVRLCEEMDEFWCYKPLFERILHKMDRCGTYE 968
Query: 1230 IVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVA 1289
+ L +P VK +RA+ LY AG RT IA +V+++ + L VA
Sbjct: 969 LEPLLELPAVKINRAKQLYAAGFRTIEDIARIPAMTLVQSV-----------EHMPLRVA 1017
Query: 1290 KKIKNGARKIVLEK 1303
+I + A+ I+++K
Sbjct: 1018 TEIVSAAKIILMKK 1031
>gi|357614664|gb|EHJ69202.1| hypothetical protein KGM_11617 [Danaus plexippus]
Length = 881
Score = 351 bits (901), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 264/837 (31%), Positives = 403/837 (48%), Gaps = 106/837 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + ++K R I +LY WQ ECL++ + R NL+Y TS GK+ VAE+LMLR +I
Sbjct: 126 LPMIVKGLFKTYRNIEQLYDWQEECLNLQAIRDRLNLIYALPTSGGKTLVAEVLMLREVI 185
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ A+ +LP+V+I EK L L V Y G G G LP K ++ +
Sbjct: 186 NRKHNAIFILPFVAIVQEKIWALAPFALQLEFLVEEYAG--GKGHLPPKKRRKKNTIYIA 243
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +LV ++E RL E+G+IV+DELH++ + RG LE LLT + +A
Sbjct: 244 TIEKGLALVRSLIELNRLDEVGLIVVDELHLIGEAGRGSTLETLLTTVIFAN-------- 295
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
G+QIVGMSAT+ N+ + +L+A ++E FRPV L+EY+K+G+
Sbjct: 296 ---------------KGIQIVGMSATIGNLPDLGRFLKAEIFEKQFRPVELKEYVKLGDV 340
Query: 743 IYSKKMDVVRTI-------LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCEST 795
+Y + D+ + + A L DPD + L EVV G S L+FC +++ CE+
Sbjct: 341 LYRLREDMELVVERKLAYDYSPAALA-LDPDFLGGLVSEVVP-GGSCLVFCPTKRNCENV 398
Query: 796 ARHVSKFLKKFSINVHSSDSEFIDITSAIDALRR--CPAGLDPVLEETLPSGVAYHHAGL 853
A + + +K ++ H ++ AL+R C G P L +GVA+HHAGL
Sbjct: 399 AALLCRLQRK-DMSQHRTEER--------SALQRSLCNEGAAPGLVGAAAAGVAFHHAGL 449
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
+ +ER ++E +R G++ V+ TSTLAAGVNLPARRVI R P +GR + Y+QM GR
Sbjct: 450 SADERSLIENAFRSGVISVICCTSTLAAGVNLPARRVIVRAPLVGRQLLSMGSYKQMVGR 509
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQ 973
AGR G+ GES+LI P E + L+E PP LS K + +L VA + +
Sbjct: 510 AGRAGVCEDGESILIVSPREWPAVRTRLSEGIPP---ALSSLKTSIDELLLSAVALNLCR 566
Query: 974 TAEDIHRYVRCTLLNSTKPFQ---DVVKSAQDSLRWLCHRKFLE-------WNEDTKLYS 1023
+ + + TLL + P + D+ + +S+ L + L+ ED +
Sbjct: 567 DRKALKALLESTLL-AIAPEEGSVDIDEVCNESIGSLLRSEALQVVGRDGHVKEDELQLA 625
Query: 1024 TTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYYE 1083
+ +GRAA L + ++ +L +A G VL LHL++L TP V + PD+ YY
Sbjct: 626 VSTVGRAAVKGCLDLTTTKQLMKELEQASRGLVLMGCLHLLFLVTPQEVSIRPDYRHYYT 685
Query: 1084 RFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNM 1143
+ L +G++E +RM G P+ S+
Sbjct: 686 LYSNLDEEGLQTARVLGITEVNAVRMMTGKPITNVSE----------------------- 722
Query: 1144 LSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFC 1203
V RFYVAL L L + P V + + + +G + +L +A C
Sbjct: 723 -------SVLNRFYVALTLRDLYRRMPFAAVSDKYNIPKGTISSLLSSAVALCLGAQRAC 775
Query: 1204 ERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASI 1263
LG + L + +R+ E+ L +P VK RA L++AG R +A A+
Sbjct: 776 VELGSWTYGTLFDELASRLKHCGAPELEALMELPAVKKGRALQLHRAGFRRLEDVARAAP 835
Query: 1264 SEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEEARIAAFSAFKSLGL 1320
++V A+ S A + + AR +++EK E R A + L L
Sbjct: 836 DDLVAAVTHLSRT-----------AANHLISAARVLLIEKVENLRAEAEDVMEGLNL 881
>gi|170573699|ref|XP_001892566.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158601798|gb|EDP38603.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 845
Score = 348 bits (894), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 246/805 (30%), Positives = 407/805 (50%), Gaps = 86/805 (10%)
Query: 514 CSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMA 573
C I++ + WQ +CL+ + ++ +N++ +T AGK+ VAEI+MLR LI+ +
Sbjct: 95 CEIFQNFTDTLFLDWQNQCLNDEHLISGKNMILSMTTGAGKTLVAEIVMLRELINRRRSC 154
Query: 574 LLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKAN 628
+LV+PYV+I EK L + + + Y ++G LP K SV V TIEKAN
Sbjct: 155 ILVVPYVAIAQEKVYSLSLFEDKFNICIEEYAASKG--RLPPIKHRKRESVYVATIEKAN 212
Query: 629 SLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSG 688
L+N ++E R+ EIG++V+DELHM+ + RG ++E L K +GT
Sbjct: 213 LLINSLIEVDRIDEIGVLVVDELHMIGENIRGAIIEQGLIKF---MQKGTG--------- 260
Query: 689 TSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKM 748
QIVGMSAT+ NV +A +L AA++ T FRPV L E +K+ N++Y +
Sbjct: 261 ------------QIVGMSATLSNVEQLAKFLNAAVFSTKFRPVKLIEKVKIDNSLYVIQP 308
Query: 749 D---VVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKK 805
+ L L +DPD +V L ++V SVLIFC ++K CE+ + +S + K
Sbjct: 309 GGELELEMNLGENKLKNRDPDGLVPLLYDIVPR-RSVLIFCPTKKNCENVCKMLSYLMPK 367
Query: 806 FSINVHSSDSEFIDITSAIDALRRCPAGLDP-VLEETLPSGVAYHHAGLTVEEREVVETC 864
+ + + + + AL+ G P +LE ++ GVAYHH+GLT +ER+++E
Sbjct: 368 -----SFRERKKTERLAIVKALKNEEDGEFPSLLELSITRGVAYHHSGLTADERKIIEGA 422
Query: 865 YRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGE 924
Y+ G++ ++ TSTLAAGVNLPARRVI P +G++ + +Y QM GRAGR G D GE
Sbjct: 423 YQDGIISIICCTSTLAAGVNLPARRVIINAPLVGKESLRKAQYLQMIGRAGRAGYDDMGE 482
Query: 925 SMLICKPE-EVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVR 983
++ + + E K + ++ P +S L+E + +L++++ + Q E++ V+
Sbjct: 483 AVTVVRSSYEESKFLDMIKGPLPRCNSSLNEPA-VFSSFLLDLISLKVAQRLEELEVLVQ 541
Query: 984 CTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLI 1043
TL + K ++ L +L + + + + YS + G A F + L P +
Sbjct: 542 QTLFGIQNSGSE--KLLREMLEYLINHDLVSVDGNGN-YSASLFGMAVFSAPLSPLVARQ 598
Query: 1044 VLDDLS-RAREGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVS 1102
+ LS +EG VL+S HL+++ P ++ V+ DW ++YE + L +Q++ ++GV+
Sbjct: 599 MCTLLSNNIKEGIVLSSHFHLLFMMVPFDISVDIDWNIFYEEYKALPRSEQALLARLGVN 658
Query: 1103 EPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALIL 1162
+ L+R P KL + L R Y++ +L
Sbjct: 659 DKQLVRCFIDQP-----KLNEGESPL--------------------------RLYISFML 687
Query: 1163 SRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNR 1221
RL ++ +V E F V+RG +Q + + AS ++ F E+L ++ L+ L+
Sbjct: 688 HRLWKQETFFDVAERFHVSRGWLQNVLQATCSQASSITRFSEKLPSFWSLKNLLPDLVQH 747
Query: 1222 VSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
+ + E++ L + VK RAR LY AG +T +IA ++ S I
Sbjct: 748 LRDCSQQELIPLLALDGVKRGRARQLYNAGFKTIGSIASTDPLVLL-------STIDHLN 800
Query: 1282 RRVQLGVAKKIKNGARKIVLEKAEE 1306
RR + + K R + EK EE
Sbjct: 801 RRQANAIIRSAKVLLRDQLAEKVEE 825
>gi|194865309|ref|XP_001971365.1| GG14474 [Drosophila erecta]
gi|190653148|gb|EDV50391.1| GG14474 [Drosophila erecta]
Length = 1052
Score = 346 bits (888), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 262/852 (30%), Positives = 410/852 (48%), Gaps = 136/852 (15%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
I + +GI+ LY WQ ECL++ + QR+NL+Y TS GK+ VAEILMLR L+ + L
Sbjct: 256 ILEHKGINSLYEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLF 315
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
+LPYVSI EK + L V Y G G P K S+ + +IEK L
Sbjct: 316 ILPYVSIVQEKVSAMSPFAIDLDFIVEEYTA--GKGKCPPQPRRKRRSLFIASIEKGAVL 373
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
++ +++ R EIG++V+DELH++ ++ RG LE LTK+ +
Sbjct: 374 MDSLIDVQRPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNA--------------- 418
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY--SKKM 748
+QIVGMSAT+ N++ ++ +L A +Y FRPV L+EYIK G + +
Sbjct: 419 --------NIQIVGMSATIGNLSEISSFLNADVYTRGFRPVELKEYIKCGPDLMEINSAG 470
Query: 749 DVVRTILTAAN---------LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
+ I + + DPDH+ L E E H L+FC SRK CE+ A +
Sbjct: 471 QTLEEIFVPSRSVDYNYSEAVKRADPDHLAGLISECAPE-HCCLVFCPSRKNCENVALLL 529
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
S+ + K H SE +D+ +DAL + L PVL +TLP G+AYHH+GLT +ER+
Sbjct: 530 SRIVPKQKFFEHRR-SEKLDL---MDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERK 585
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
+ET YR G+V V+ TSTLAAGVNLPA+RVI R P +G++F+ +Y+QM GRAGR G+
Sbjct: 586 YIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRAPYVGQEFMTLCKYKQMVGRAGRAGL 645
Query: 920 DTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGIVQTA 975
GES+LI + ++ + +L P+ LS ++ G+ IL VV + +
Sbjct: 646 GEAGESILIAQSKDNLLVGQMLFS---PMDKALSSLDQQEAVGLQSLILSVVGLNLAECR 702
Query: 976 EDIHRYVRCTLLN-STKPFQDVVKS-AQDSLRWLCHRKFLEWNE---------------- 1017
D++R V TLL+ K + V LR + K L+ E
Sbjct: 703 RDLNRLVNSTLLSVQAKSLEVAVDEIVLRILREMFKNKVLQLTEPPAKSKINSSDIITSQ 762
Query: 1018 -----------------DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD 1060
+ + T +GRAAF + + + + + +L +A++ +L++
Sbjct: 763 DVSQTNRPAGERRLLIGQSTPFKLTNIGRAAFKAGIDYKRANAIHKELQQAQQQLILSNY 822
Query: 1061 LHLVYLSTPINV-----EVEP-DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAP 1114
HL+YL N E+ P D + + + L Q++ Q+G +E + R+
Sbjct: 823 FHLLYLVVCFNSNERGDELFPADASILFGVYTSLPLDSQALFKQIGFTEAHAARLF---- 878
Query: 1115 MRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEV 1174
T+ + G L +L R Y LIL+ ++ P+ V
Sbjct: 879 ---------KTQSVQGPLSLQLN-----------------RLYKVLILADILNLLPLPSV 912
Query: 1175 CETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVEL 1233
+ V RG +Q L + +S + CE L ++ + L + N++ E+ L
Sbjct: 913 ASKYNVERGTLQHLISQSTAASSAIVRLCEELEEFWCYKPLFERILNKMDRCGTFELEPL 972
Query: 1234 TTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIK 1293
+P VK +RAR LY AG +T IA + +V++L + L VA +I
Sbjct: 973 MELPAVKINRARQLYAAGFQTIEDIARVRPTHLVQSL-----------EHMPLRVATEIV 1021
Query: 1294 NGARKIVLEKAE 1305
+ A+ I+++K +
Sbjct: 1022 SAAKIILMKKLD 1033
>gi|339257148|ref|XP_003369944.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316965512|gb|EFV50215.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 923
Score = 345 bits (884), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 261/851 (30%), Positives = 409/851 (48%), Gaps = 116/851 (13%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS + KK RGIS LY WQ L ++ RNL+ T GK+ +AEIL+L++L+
Sbjct: 115 LPSNLIEALKKHRGISSLYDWQKAVLSHPSIVSGRNLIITLPTGGGKTLLAEILILKQLL 174
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K AL VLPYVSI EK + L L L V Y N+G +P + SV V
Sbjct: 175 CQQKDALFVLPYVSIVQEKVKGLLPLGLDLEFLVEEYASNKG--RIPPIKRRRKKSVYVS 232
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMV-ADQNRGYLLELLLTKLRYAAGEGTSDS 681
TIEKA +LVN + E ++ +G++++DELH++ NRG LE L++KL Y A
Sbjct: 233 TIEKAQALVNSLFESKKIGNLGLVIVDELHLIGVGGNRGAALEQLISKLLYCA------- 285
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN 741
Q++G+SAT+ N+ + +L+A L+ NFRPV L EY+KV N
Sbjct: 286 ----------------QNCQLIGISATLSNLEDLTTFLKADLFTANFRPVSLTEYVKVEN 329
Query: 742 AIYSKK---------MDVVRTILTAANL-------------GGKDPDHIVELCDEVVQEG 779
+Y ++ R + TA + +DPD++ L +EV+
Sbjct: 330 ILYKVNSNINCRDSLLEFYRHLPTAVQILSAFIDKYLKLTQKSRDPDNLSFLVNEVIPSA 389
Query: 780 HSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLE 839
S L+FC ++K E+ +S+ L + H S + + D L C L + +
Sbjct: 390 -SCLVFCPTKKSAENVCIMLSQTLPS-ELTDHKSKEKRKLLE---DMLEECGRKLCSIQK 444
Query: 840 ETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGR 899
+P G+AYHH+GLT +ER +++ + +G + VL TSTLAAGVNLPA+RVI R IG
Sbjct: 445 RCIPYGLAYHHSGLTTDERRLIQDAFLEGTLCVLCCTSTLAAGVNLPAKRVILRSLTIGN 504
Query: 900 DFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDK-NG 958
I Y QM GRAGR G+D GES+ + + + ++ LL S L +D G
Sbjct: 505 RPIMKQEYTQMTGRAGRAGLDDSGESVTVIQRNQKDQLEELLTNVTEQCRSSLMDDNGRG 564
Query: 959 MTHAILEVVAGGIVQTAEDIHRYVRCTLL-----NSTKPFQDVVKSAQDSLRWLCHRKFL 1013
+ + +L ++ ++ + D+ + + TL NS++ +DSLR+L + F+
Sbjct: 565 LKNLLLSIIGLEMICSKADLIAFFKKTLFYIQFKNSSEI--SPTDLFEDSLRYLVNEGFI 622
Query: 1014 EWNE--------DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY 1065
N D+ + T G+A S + + S V DL+ A + +L + LHL+Y
Sbjct: 623 LINRKNKTTFSSDSIVVQITNFGKAVCKSGIDIQISKQVYSDLTIASQSMMLTTRLHLIY 682
Query: 1066 LSTPIN--VEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRD 1123
S P E+ W+ +Y + +L + + G+ Y+++ G +SK
Sbjct: 683 CSIPYTNQEELNISWDAFYNEYNKLDKCEMKMLEAFGIDMCYIIKRKQGIA---ASK--- 736
Query: 1124 STKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARG 1183
D L R Y ALIL ++ + + +V F V+RG
Sbjct: 737 ----------------------DLLNLSTLNRVYAALILRQIWNQHNLWDVAAAFAVSRG 774
Query: 1184 MVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKG- 1241
+Q L ++A FAS + FCE++ + L+ L++ F +++ VRAE+V L I V+
Sbjct: 775 YIQHLIQSAASFASSLLRFCEQMEDLWALKSLLSDFSRALAYCVRAELVPLMEIQGVQKM 834
Query: 1242 -----SRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGA 1296
+RA LY AG T ++A + V L S ++ Q + AK I N
Sbjct: 835 TVLLQARALQLYNAGFTTVASVARSD----VLTLISSVDHLSMKQAAQMISSAKMILNEK 890
Query: 1297 RKIVLEKAEEA 1307
+ ++E+AEE
Sbjct: 891 VEALMEQAEEV 901
>gi|195376279|ref|XP_002046924.1| GJ13152 [Drosophila virilis]
gi|194154082|gb|EDW69266.1| GJ13152 [Drosophila virilis]
Length = 1025
Score = 342 bits (878), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 265/854 (31%), Positives = 410/854 (48%), Gaps = 144/854 (16%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
I++ +GI LY WQ ECL++ + +R+NL+Y TS GK+ VAEILMLR L+ + L
Sbjct: 227 IFEHKGIKSLYEWQDECLNLPAIRKRKNLIYALPTSGGKTLVAEILMLRELLCRQRNVLF 286
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
+LPYVSI EK + L V Y G G P K S+ + +IEK L
Sbjct: 287 ILPYVSIVQEKVSAMSPFAIALDFIVDEYTA--GKGKCPPQPQRKRRSLFIASIEKGAVL 344
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
++ +++ R EIG++V+DELH++ ++ RG LE LTK+ +
Sbjct: 345 MDSLIDAQRPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNA--------------- 389
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN--------- 741
+QIVGMSAT+ N+ ++ +L A +Y FRPV L EYIK G+
Sbjct: 390 --------NIQIVGMSATIGNLNEISAFLNADVYTRGFRPVELREYIKCGHDLLEINSAG 441
Query: 742 ----AIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTAR 797
I+ + V A DPDH+ L E E H L+FC +RK CE+ A
Sbjct: 442 QTLEEIFVPQRTVSYNYSPAVERA--DPDHLAGLISECAPE-HCCLVFCPTRKNCENVAL 498
Query: 798 HVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEE 857
+S+ + K H SE D+ SA+D + C L PVL +TLP G+AYHH+GLT +E
Sbjct: 499 LLSRIVPKQKFFEHRQ-SEKADLMSALDKM--C-GILSPVLAKTLPYGIAYHHSGLTTDE 554
Query: 858 REVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRT 917
R+ +ET YR G++ V+ TSTLAAGVNLPA+RVI R P +G++F+ +Y+QM GRAGR
Sbjct: 555 RKYIETAYRFGVITVICCTSTLAAGVNLPAKRVIIRAPYVGQEFMTLCKYKQMVGRAGRA 614
Query: 918 GIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSE----DKNGMTHAILEVVAGGIVQ 973
G+ GES+LI + ++ + +L P+ LS D G+ IL V+ +
Sbjct: 615 GLGEAGESILITQSKDNFLVGQMLFS---PMDKALSSLDQLDAVGLQSLILSVIGLNLAD 671
Query: 974 TAEDIHRYVRCTLLNST-------------KPFQDVVK---------------------S 999
D++R V TLL + +D+ K +
Sbjct: 672 CRRDLNRLVNSTLLAVQAGALEIAVDELVLRILRDMFKNKVLQLRETVPKGKSNSSDIMT 731
Query: 1000 AQD---SLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFV 1056
QD S R R+ L ++ T+ + T +GRAAF + + + + + +L +A++ +
Sbjct: 732 TQDINQSNRSASDRRLL-ISQSTR-FQLTNIGRAAFKAGIDYKRAFAIHRELQQAQQQLI 789
Query: 1057 LASDLHLVYLSTPINV-----EVEP-DWELYYERFLELSALDQSVGNQVGVSEPYLMRMA 1110
L S +HL+YL N E+ P D + + + LS Q++ Q+G +E + R+A
Sbjct: 790 LTSYVHLLYLVVCFNSNERGDEMFPADANILFREYTSLSTQTQALFKQLGFTEAHAARLA 849
Query: 1111 HGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETP 1170
T+ + G L +L R Y LIL+ ++ P
Sbjct: 850 -------------KTQSVQGPLALQLN-----------------RLYKVLILADVLALVP 879
Query: 1171 VLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLEGLIAKFQNRVSFGVRAE 1229
+ V + V RG +Q L AS + CE++ ++ L + ++ E
Sbjct: 880 LPSVASKYNVERGTLQQLISQCTAAASAIVRLCEQIDEFWCYRPLFERINQKMDRCGTLE 939
Query: 1230 IVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVA 1289
+ L +P VK +RA+ LY AG +T +A+ +VKA+ + L VA
Sbjct: 940 LESLLELPAVKINRAKQLYAAGFKTIEDVAKTRPIALVKAV-----------EFMPLKVA 988
Query: 1290 KKIKNGARKIVLEK 1303
+I + A+ I+++K
Sbjct: 989 TEIISAAKIILMKK 1002
>gi|62089320|dbj|BAD93104.1| DNA polymerase theta variant [Homo sapiens]
Length = 2214
Score = 341 bits (874), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 185/476 (38%), Positives = 279/476 (58%), Gaps = 46/476 (9%)
Query: 812 SSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVR 871
+S+S ++ +D LRR P+GLD VL++T+P GVA+HHAGLT EER+++E +R+GL+R
Sbjct: 3 TSNSGQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIR 62
Query: 872 VLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKP 931
VL ATSTL++GVNLPARRVI R P G +D Y+QM GRAGR G+DT GES+LICK
Sbjct: 63 VLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKN 122
Query: 932 EEVKKIMGLLNESCPPLHSCLS-----EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTL 986
E K + LL S P+ SCL E M AILE++ GG+ T++D+H Y CT
Sbjct: 123 SEKSKGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTF 182
Query: 987 L-NSTKPFQDVVKSAQDSLR---------WLCHRKFLEWNE-----DTKLYSTTPLGRAA 1031
L S K + ++ Q+S++ WL +F++ E + K+Y T LG A
Sbjct: 183 LAASMKEGKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHLGSAT 242
Query: 1032 FGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE-VEPDWELYYERFLELSA 1090
SSL P ++L + DL RA +GFVL +DLH++YL TP+ + DW ++ + +L
Sbjct: 243 LSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMFEDWTTIDWYRFFCLWEKLPT 302
Query: 1091 LDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTL 1150
+ V VGV E +L R G K+ T+ H + +
Sbjct: 303 SMKRVAELVGVEEGFLARCVKG-------KVVARTERQH------------------RQM 337
Query: 1151 RVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYD 1210
+ KRF+ +L+L L+ E P+ E+ + + RG +Q+LQ++A +A M++VF RLGW++
Sbjct: 338 AIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHN 397
Query: 1211 LEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEI 1266
+E L+++FQ R++FG++ E+ +L + + RAR LY +G T +A A+I E+
Sbjct: 398 MELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEV 453
Score = 246 bits (629), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 185/545 (33%), Positives = 265/545 (48%), Gaps = 103/545 (18%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 1684 LNSLLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQ 1743
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIP-EGHNKGKQHP--------------------ST 1820
LAG FS ++ DIA VL+ LKLP E N+G + ST
Sbjct: 1744 LAGHSFSFTSSDDIAEVLFLELKLPPNREMKNQGSKKTLGSTRRGIDNGRKLRLGRQFST 1803
Query: 1821 DKHCLDLLRHEHPIVPVIKEHRTLA-------------KLLNCTLGSICSLARISMSTQK 1867
K L+ L+ HP+ +I E R + K LN LG + RI +Q
Sbjct: 1804 SKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKCLNPFLG----MERIYPVSQS 1859
Query: 1868 YTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN-------------------EDIY 1908
+T ATGR++ EPN+Q V E KM Y
Sbjct: 1860 HT----------ATGRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGKY 1909
Query: 1909 GGNAEVD-HCK---------------INARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
V+ C+ I+ R F+P IL AADYSQ+ELR++AH S
Sbjct: 1910 KKGFSVNPRCQAQMEERAADRGMPFSISMRHAFVPFPGGSIL-AADYSQLELRILAHLSH 1968
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI +L+ DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+
Sbjct: 1969 DRRLIQVLNT-GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMG 2027
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
N+A I SFKS + G+ ++ V +C + G+V+++ GR+R+L IK N K+
Sbjct: 2028 IKENDAACYIDSFKSRYTGINQFMTETVKNCKRDGFVQTILGRRRYLPGIKDNNPYRKAH 2087
Query: 2073 AQRQAVNSICQGSAADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQMLK 2120
A+RQA+N+I QGSAADI+KIA +NI HS G+ + D + + + L+
Sbjct: 2088 AERQAINTIVQGSAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDRTGLSRKRKLQ 2147
Query: 2121 GR-CRL-----LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
G C + +LQ+HDEL+ EV + + +V+ MESA L V L VK+++G++WG
Sbjct: 2148 GMFCPIRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWG 2207
Query: 2175 SLEPF 2179
L+ F
Sbjct: 2208 ELKDF 2212
>gi|195167763|ref|XP_002024702.1| GL22611 [Drosophila persimilis]
gi|194108107|gb|EDW30150.1| GL22611 [Drosophila persimilis]
Length = 1029
Score = 340 bits (872), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 259/828 (31%), Positives = 407/828 (49%), Gaps = 114/828 (13%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
I + +GI LY WQ ECL++ + QR+NL+Y TS GK+ VAEILMLR L+ + L
Sbjct: 257 ILEHKGIKSLYEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCQERNVLF 316
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
+LPYVSI EK + L V Y G G P K S+ + +IEK L
Sbjct: 317 ILPYVSIVQEKVSAMSPFAIDLDFIVDEYTA--GKGKCPPEPRRKRRSLFIASIEKGAVL 374
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
++ +++ R EIG++V+DELH++ ++ RG LE LTK+ +
Sbjct: 375 MDSLIDVQRPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNA--------------- 419
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS----- 745
+QIVGMSAT+ N++ ++ +L A +Y FRPV L+EYIK G+ +
Sbjct: 420 --------NIQIVGMSATIGNLSEISAFLNADVYTRGFRPVELKEYIKCGSDLLEINSAG 471
Query: 746 ---KKMDVVRTILT---AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
+++ V L + + DPDH+ L E E H L+FC SRK CE+ A +
Sbjct: 472 HTLEEIFVPNRTLDFNYSEAVKRADPDHLAGLISECAPE-HCCLVFCPSRKNCENVALLL 530
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
S+ + K H SE D+ +DAL + L PVL +TLP G+AYHH+GLT +ER
Sbjct: 531 SRIVPKQKFFEHRR-SEKADL---MDALDKICGVLSPVLAKTLPYGIAYHHSGLTTDERR 586
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
+ET YR G+V V+ TSTLAAGVNLPA+RVI R P +G++F+ +Y+QM GRAGR G+
Sbjct: 587 YIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRAPYVGQEFMTLCKYKQMVGRAGRAGL 646
Query: 920 DTKGESMLICKPEEVKKIMGLLNESC-PPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDI 978
GES+LI + ++ ++ +L L S ++ G+ IL V+ + + D+
Sbjct: 647 GEAGESILIAQSKDNLQVGQMLFSPMDKALSSLYQQEAVGLQSLILSVIGLNLAECRRDL 706
Query: 979 HRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFL---EWNEDTK-------------LY 1022
+R V TLL +V A D L R+ + N+ T+ +
Sbjct: 707 NRLVNSTLLAVQATALEV---AVDELVLRILREMFKNKDVNQSTRPAGDRRLFIGQSTRF 763
Query: 1023 STTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV-----EVEP- 1076
T +GRAAF + + + + + +L +A++ +L S HL+YL N E+ P
Sbjct: 764 KLTNIGRAAFKAGIDYKRASAIHRELKQAQKQLILNSYSHLLYLVVCFNSNERGDELFPA 823
Query: 1077 DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRL 1136
D + + + L Q++ Q+G +E + R+ T+ + G + +L
Sbjct: 824 DASILFNVYSALRTESQALFKQLGFTEAHAARLF-------------KTQSVQGPMAQQL 870
Query: 1137 GITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFA 1196
R Y LILS ++ P+ V + V RG +Q L + +
Sbjct: 871 N-----------------RLYKVLILSDILDLLPLPTVSCKYNVERGTLQHLISQSIAAS 913
Query: 1197 SMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTP 1255
S + C+ + ++ + L + +++ E+ L +P VK +RA+ LY AGLRT
Sbjct: 914 SALVRLCDEMEEFWCYKPLFERVLHKMDRCGTVELEPLMELPGVKINRAKQLYAAGLRTI 973
Query: 1256 LAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEK 1303
IA+ +V+ + + L VA +I + A+ I+++K
Sbjct: 974 EDIAKIRPMTLVQTV-----------EHMPLRVATEIVSAAKIILMKK 1010
>gi|119599919|gb|EAW79513.1| polymerase (DNA directed), theta, isoform CRA_d [Homo sapiens]
gi|119599920|gb|EAW79514.1| polymerase (DNA directed), theta, isoform CRA_d [Homo sapiens]
Length = 2270
Score = 340 bits (871), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 183/469 (39%), Positives = 275/469 (58%), Gaps = 46/469 (9%)
Query: 819 DITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATST 878
++ +D LRR P+GLD VL++T+P GVA+HHAGLT EER+++E +R+GL+RVL ATST
Sbjct: 66 ELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATST 125
Query: 879 LAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIM 938
L++GVNLPARRVI R P G +D Y+QM GRAGR G+DT GES+LICK E K +
Sbjct: 126 LSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGI 185
Query: 939 GLLNESCPPLHSCLS-----EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLL-NSTKP 992
LL S P+ SCL E M AILE++ GG+ T++D+H Y CT L S K
Sbjct: 186 ALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTFLAASMKE 245
Query: 993 FQDVVKSAQDSLR---------WLCHRKFLEWNE-----DTKLYSTTPLGRAAFGSSLCP 1038
+ ++ Q+S++ WL +F++ E + K+Y T LG A SSL P
Sbjct: 246 GKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHLGSATLSSSLSP 305
Query: 1039 EESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE-VEPDWELYYERFLELSALDQSVGN 1097
++L + DL RA +GFVL +DLH++YL TP+ + DW ++ + +L + V
Sbjct: 306 ADTLDIFADLQRAMKGFVLENDLHILYLVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAE 365
Query: 1098 QVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFY 1157
VGV E +L R G K+ T+ H + + + KRF+
Sbjct: 366 LVGVEEGFLARCVKG-------KVVARTERQH------------------RQMAIHKRFF 400
Query: 1158 VALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAK 1217
+L+L L+ E P+ E+ + + RG +Q+LQ++A +A M++VF RLGW+++E L+++
Sbjct: 401 TSLVLLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQ 460
Query: 1218 FQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEI 1266
FQ R++FG++ E+ +L + + RAR LY +G T +A A+I E+
Sbjct: 461 FQKRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEV 509
Score = 246 bits (627), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 186/546 (34%), Positives = 266/546 (48%), Gaps = 105/546 (19%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 1740 LNSLLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQ 1799
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIP--EGHNKGKQHP--------------------S 1819
LAG FS ++ DIA VL+ LKLP P E N+G + S
Sbjct: 1800 LAGHSFSFTSSDDIAEVLFLELKLP-PNREMKNQGSKKTLGSTRRGIDNGRKLRLGRQFS 1858
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLA-------------KLLNCTLGSICSLARISMSTQ 1866
T K L+ L+ HP+ +I E R + K LN LG + RI +Q
Sbjct: 1859 TSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKCLNPFLG----MERIYPVSQ 1914
Query: 1867 KYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN-------------------EDI 1907
+T ATGR++ EPN+Q V E KM
Sbjct: 1915 SHT----------ATGRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGK 1964
Query: 1908 YGGNAEVD-HCK---------------INARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Y V+ C+ I+ R F+P IL AADYSQ+ELR++AH S
Sbjct: 1965 YKKGFSVNPRCQAQMEERAADRGMPFSISMRHAFVPFPGGSIL-AADYSQLELRILAHLS 2023
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D LI +L+ DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+
Sbjct: 2024 HDRRLIQVLNT-GADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQM 2082
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
N+A I SFKS + G+ ++ V +C + G+V+++ GR+R+L IK N K+
Sbjct: 2083 GIKENDAACYIDSFKSRYTGINQFMTETVKNCKRDGFVQTILGRRRYLPGIKDNNPYRKA 2142
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQML 2119
A+RQA+N+I QGSAADI+KIA +NI HS G+ + D + + + L
Sbjct: 2143 HAERQAINTIVQGSAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDRTGLSRKRKL 2202
Query: 2120 KGR-CRL-----LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+G C + +LQ+HDEL+ EV + + +V+ MESA L V L VK+++G++W
Sbjct: 2203 QGMFCPIRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASW 2262
Query: 2174 GSLEPF 2179
G L+ F
Sbjct: 2263 GELKDF 2268
>gi|195435520|ref|XP_002065728.1| GK20010 [Drosophila willistoni]
gi|194161813|gb|EDW76714.1| GK20010 [Drosophila willistoni]
Length = 1063
Score = 338 bits (868), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 257/861 (29%), Positives = 411/861 (47%), Gaps = 147/861 (17%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
I++ + I LY WQ ECL++ + QR+NL+Y TS GK+ VAEILMLR L+ K L
Sbjct: 261 IFEHKNIKSLYEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCREKNVLF 320
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
+LPYVSI EK + L V Y G G P K + V +IEK L
Sbjct: 321 ILPYVSIVQEKVSAMSPFAIALDFLVEEYTA--GKGKCPPQPCRKRRRLFVASIEKGAVL 378
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
++ +++ R EIG++V+DELH++ ++ RG LE LLTK+ +
Sbjct: 379 MDSLIDVDRPHEIGLVVVDELHLIGEKGRGATLEALLTKVMFLNA--------------- 423
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS----- 745
G+QIVGMSAT+ N++ ++ +L+A +Y FRPV L+EYIK G +
Sbjct: 424 --------GIQIVGMSATIGNLSEISSFLKADVYTRGFRPVELKEYIKCGTDLLQIHPNG 475
Query: 746 KKMDVVRTILTAANLG------GKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
K + + N DPDH+ L E E H L+FC +RK CE+ A +
Sbjct: 476 KTPEEIFIPSRRVNFNYSPAVERADPDHLAGLISECAPE-HCCLVFCPTRKNCENVALLL 534
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
S+ + K H SE +D+ +DAL + L PVL +TLP G+AYHH+GLT +ER+
Sbjct: 535 SRIVPKQKFLEHRQ-SEKVDL---MDALDKICGILSPVLAKTLPYGIAYHHSGLTTDERK 590
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
+ET YR G++ V+ TSTLAAGVNLPA+RVI R P +G++F+ +Y+QM GRAGR G+
Sbjct: 591 YIETAYRFGVITVICCTSTLAAGVNLPAKRVIIRAPYVGQEFMTLCKYKQMVGRAGRAGL 650
Query: 920 DTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSE----DKNGMTHAILEVVAGGIVQTA 975
GES+LI + ++ ++ ++ P+ LS + G+ IL V+ + +
Sbjct: 651 GEAGESILIAQSKDNLQVGQMM---FSPMDKALSSMDHLEAVGLQSLILSVIGLNLAECR 707
Query: 976 EDIHRYVRCTL----------------------------LNSTKP--------------- 992
D++R + TL L ++P
Sbjct: 708 RDLNRLINSTLLAVQANALDVAVDDVVLRILREMFKNKVLQLSEPQNNKINKNNCSDIIT 767
Query: 993 FQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAR 1052
QD+ ++A S R + + L + T+ + T +G+AAF + + + + + +L A+
Sbjct: 768 TQDINQTATTSNRSATNDRRLLIGQSTR-FQLTSIGKAAFKAGIDYKRAYAIHKELKLAQ 826
Query: 1053 EGFVLASDLHLVYLSTPINVEVEPDWELY-------YERFLELSALDQSVGNQVGVSEPY 1105
+L + LHL+YL N D EL+ + + LS Q++ Q+G +E
Sbjct: 827 HQLILTNYLHLLYLIVCFNSNERGD-ELFPADALRLFHAYSSLSINKQAIFRQLGFTE-- 883
Query: 1106 LMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRL 1165
AH A + + + G L +L R Y LIL +
Sbjct: 884 ----AHAAKLF-------KNQSVQGPLALQLN-----------------RLYKVLILDDI 915
Query: 1166 VQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLEGLIAKFQNRVSF 1224
+ P+ V + V RG +Q L + +S + C+ + ++ + L + ++
Sbjct: 916 LDLEPLPNVASKYNVERGTLQHLISQSIAASSAIVRLCDEIDEFWCFKPLFERILRKMDR 975
Query: 1225 GVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRV 1284
E+ L +P VK +RA+ L+ AG ++ IA+ +VK++ +
Sbjct: 976 CGTLELEPLLELPLVKINRAKQLFAAGFKSIEDIAKTHPINLVKSV-----------EHM 1024
Query: 1285 QLGVAKKIKNGARKIVLEKAE 1305
L VA +I + A+ I+++K +
Sbjct: 1025 PLKVATEIISAAKIILMKKLD 1045
>gi|195014037|ref|XP_001983947.1| GH16173 [Drosophila grimshawi]
gi|193897429|gb|EDV96295.1| GH16173 [Drosophila grimshawi]
Length = 1063
Score = 338 bits (868), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 264/862 (30%), Positives = 414/862 (48%), Gaps = 145/862 (16%)
Query: 509 LPSEICS-IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP + S I++ +GI LY WQ ECL++ + +R+NL+Y TS GK+ VAEIL+LR L+
Sbjct: 257 LPDRVKSLIFEHKGIKSLYEWQDECLNLPAIRKRKNLIYALPTSGGKTLVAEILILRELL 316
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ L +LPYVSI EK + L V Y G G P K S+ +
Sbjct: 317 CRERNVLFILPYVSIVQEKVSAMSPFAIALDFIVDEYTA--GKGKCPPQPQRKRRSLFIA 374
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
+IEK L++ +++ R EIG++V+DELH++ ++ RG LE LTK+ +
Sbjct: 375 SIEKGAVLMDSLIDAERPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNA------- 427
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN- 741
+QIVGMSAT+ N+ ++ +L A +Y FRPV L+EYIK GN
Sbjct: 428 ----------------NIQIVGMSATIGNLNEISAFLNADVYTRGFRPVELKEYIKCGND 471
Query: 742 ------------AIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSR 789
I+ K V +A + DPDH+ L E E H L+FC +R
Sbjct: 472 LLEINAAGQTLEEIFVPKRTVSYNY--SAAVERADPDHLAGLITECAPE-HCCLVFCPTR 528
Query: 790 KGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYH 849
K CE+ A +S+ + K H SE D+ A+D + C L PVL +TLP G+AYH
Sbjct: 529 KNCENVALLLSRIVPKQKFFEHRQ-SEKADLMKALDQI--C-GILSPVLAKTLPYGIAYH 584
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
H+GLT +ER+ +ET YR G++ V+ TSTLAAGVNLPA+RVI R P +G++F+ +Y+Q
Sbjct: 585 HSGLTTDERKYIETAYRFGVITVICCTSTLAAGVNLPAKRVIIRAPYVGQEFMTLCKYKQ 644
Query: 910 MAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSE----DKNGMTHAILE 965
M GRAGR G+ GES+LI + ++ + +L P+ LS + G+ IL
Sbjct: 645 MVGRAGRAGLGEAGESILITQSKDNLLVGQMLFS---PMDKALSSMDQLEAVGLQSLILS 701
Query: 966 VVAGGIVQTAEDIHRYVRCTLLN----------------------------------STK 991
V+ + D++R V TLL K
Sbjct: 702 VIGLNLADCRRDLNRLVNSTLLAVQAGSLEVAVDELVLRILRDMFKNKVLQLSESAPKGK 761
Query: 992 PFQDVVKSAQD---SLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDL 1048
P + + QD S R R+ L ++ T+ + T +GRAAF + + + + + +L
Sbjct: 762 PNSSDIMTTQDVNPSCRAAADRRLL-ISQSTR-FQLTSIGRAAFKAGIDYKRAFAIHKEL 819
Query: 1049 SRAREGFVLASDLHLVYLSTPINV-----EVEP-DWELYYERFLELSALDQSVGNQVGVS 1102
A++ +L S +HL+YL N E+ P D + + + L Q++ Q+G +
Sbjct: 820 QLAQQQLILTSYVHLLYLLVCFNSNERGDELFPADANILFREYTSLPMQTQALFMQLGFT 879
Query: 1103 EPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALIL 1162
E + R+A T+ + G L +L R Y LIL
Sbjct: 880 EAHAARLA-------------KTQSVQGPLALQLN-----------------RLYKVLIL 909
Query: 1163 SRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLEGLIAKFQNR 1221
+ ++ P+ V + + RG +Q L AS + CE++ ++ + L + ++
Sbjct: 910 ADVLALLPLPSVASKYNIERGTLQQLISQCTAAASAIMRLCEQMDEFWCYKPLFERIHHK 969
Query: 1222 VSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQ 1281
+ E+ L +P VK +RA+ L+ AG RT +A+ +VKA+
Sbjct: 970 MDRCGTLELEPLLELPAVKINRAKQLFAAGFRTVEDVAKTRPMVLVKAV----------- 1018
Query: 1282 RRVQLGVAKKIKNGARKIVLEK 1303
+ L VA ++ + A+ I+++K
Sbjct: 1019 EFMPLKVATEMISAAKIILMKK 1040
>gi|193659627|ref|XP_001943294.1| PREDICTED: helicase POLQ-like isoform 1 [Acyrthosiphon pisum]
gi|328698000|ref|XP_003240510.1| PREDICTED: helicase POLQ-like isoform 2 [Acyrthosiphon pisum]
Length = 825
Score = 337 bits (864), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 244/805 (30%), Positives = 406/805 (50%), Gaps = 113/805 (14%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++ ++KK +GI++LY WQ+ECL++D + +R+NL+Y TS GK+ VAEILML+ LI
Sbjct: 40 LPHKVKHLFKKHKGITQLYDWQIECLNLDAIKRRKNLIYALPTSGGKTLVAEILMLKELI 99
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ + +LPYV++ EK + L L +V Y G G G P + +S+ +C
Sbjct: 100 VYERNVIFILPYVALVQEKVQSLCPFGLNLEFNVEEYVG--GKGKHPPLHRKRKSSIYIC 157
Query: 623 TIEKANSLVNRML-EEGRLS--EIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
T+E+ LV+ ML + G+L +G+IV+DELH++ +Q RG LLE LTK+
Sbjct: 158 TLERGAGLVDCMLADNGQLGGRSVGMIVVDELHLLGEQKRGALLEATLTKVL-------- 209
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
DS + H +QI+GMSAT+ N+ + D+L A +Y +FRPV L E IK+
Sbjct: 210 DSKQSK------------HNIQIIGMSATIGNMQEIGDFLNAHVYTRDFRPVKLTETIKL 257
Query: 740 GNAIYSKKMDVVRTILT-----------AANLGGKDPDHIVELCDEVVQEGHSVLIFCSS 788
I+ D+ ++ + + ++ DP I L E++ +G S LIFC +
Sbjct: 258 NEQIFVINKDIDGSLKSKLDRKLDFDAYSTDMKLLDPSGIGLLVREILPDG-SCLIFCPT 316
Query: 789 RKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVA 847
+ C+S A+ + K + + V E AL+ G + P+L ++ GVA
Sbjct: 317 KSSCQSIAKIIYKTIGREETKVKLKQKE-----ELYKALKEEGDGKVCPLLSRSILFGVA 371
Query: 848 YHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY 907
YH++GLT ER+++E + G+++ + TSTLAAGVNLPA+RVI P +GRDF+ + Y
Sbjct: 372 YHNSGLTNAERKLIEEAFLDGILKCICCTSTLAAGVNLPAQRVIITSPYVGRDFMKQSTY 431
Query: 908 RQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVV 967
RQM GRAGR G+ G+S+L+ + + +KI LL + SCL +++ + IL V
Sbjct: 432 RQMVGRAGRAGLTESGDSVLLFQENDKEKIKVLLESGVEHVDSCLGTEESVVYSMILSSV 491
Query: 968 AGG----------------IVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRK 1011
+ G +Q AE R V CT+ + D+V+S D L+ +
Sbjct: 492 STGCTSSQQQLVDLMKRTLFIQQAE--KRNVECTVAS------DLVESCLDKLKSI--NA 541
Query: 1012 FLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPIN 1071
F + ED T + +AA ++L E+ + +L A +L + LHL+YL+ P
Sbjct: 542 FDKPIEDK--LKLTSIAKAAVAANLDILEAQKLYTELLEASSALILTNKLHLLYLAVPYT 599
Query: 1072 VEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGK 1131
+ + + + L Q++ N++G++E + + +GK
Sbjct: 600 ECIALERQNVLDIMTNLQGDQQALANRLGLNELCISQFFS-----------------YGK 642
Query: 1132 LEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQEN 1191
++ ++ N + +F ++LIL+ L + + V +T+ + RG + +
Sbjct: 643 VK---NVSEN----------IWNKFLMSLILNDLWNKESIWTVSKTYNLPRGTIHSFLSR 689
Query: 1192 AGRFASMVSVFCERLGWYDLEGLIAKFQNRVS------FGVRAEIVELTTIPYVKGSRAR 1245
AS + F E L L+ FQN + G +++ L ++P V+ RA
Sbjct: 690 TASHASSILRFTEALKDKKLDHFPMLFQNIIPKLNIGILGSSSDLESLMSLPSVRFGRAT 749
Query: 1246 ALYKAGLRTPLAIAEASISEIVKAL 1270
LYKAG +T +A+A+ E+ +
Sbjct: 750 QLYKAGYKTLNDVAKANKKELCNVI 774
>gi|198467131|ref|XP_001354267.2| GA20732 [Drosophila pseudoobscura pseudoobscura]
gi|198149520|gb|EAL31320.2| GA20732 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 333 bits (853), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 260/851 (30%), Positives = 409/851 (48%), Gaps = 137/851 (16%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
I + +GI LY WQ ECL++ + QR+NL+Y TS GK+ VAEILMLR L+ + L
Sbjct: 257 ILEHKGIKSLYEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCQERNVLF 316
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
+LPYVSI EK + L V Y G G P K S+ + +IEK L
Sbjct: 317 ILPYVSIVQEKVSAMSPFAIDLDFIVDEYTA--GKGKCPPEPRRKRRSLFIASIEKGAVL 374
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
++ +++ R EIG++V+DELH++ ++ RG LE LTK+ +
Sbjct: 375 MDSLIDVQRPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNA--------------- 419
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS----- 745
+QIVGMSAT+ N++ ++ +L A +Y FRPV L+EYIK G+ +
Sbjct: 420 --------NIQIVGMSATIGNLSEISAFLNADVYTRGFRPVELKEYIKCGSDLLEINSAG 471
Query: 746 ---KKMDVVRTILT---AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
+++ V L + + DPDH+ L E E H L+FC SRK CE+ A +
Sbjct: 472 HTLEEIFVPNRTLDFNYSEAVKRADPDHLAGLISECAPE-HCCLVFCPSRKNCENVALLL 530
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
S+ + K H SE D+ +DAL + L PVL +TLP G+AYHH+GLT +ER
Sbjct: 531 SRIVPKQKFFEHRR-SEKADL---MDALDKICGVLSPVLAKTLPYGIAYHHSGLTTDERR 586
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
+ET YR G+V V+ TSTLAAGVNLPA+RVI R P +G++F+ +Y+QM GRAGR G+
Sbjct: 587 YIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRAPYVGQEFMTLCKYKQMVGRAGRAGL 646
Query: 920 DTKGESMLICKPEEVKKIMGLLNESC-PPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDI 978
GES+LI + ++ ++ +L L S ++ G+ IL V+ + + D+
Sbjct: 647 GEAGESILIAQSKDNLQVGQMLFSPMDKALSSLYQQEAVGLQSLILSVIGLNLAECRRDL 706
Query: 979 HRYVRCTLLNSTKPFQDVVKSAQDS-----LRWLCHRKFLEWNE---------------- 1017
+R V TLL + ++ A D LR + K L+ E
Sbjct: 707 NRLVNSTLLAVQA---NALEVAVDELVLRILREMFKNKVLQLTESPAAKLKMNCTDIITT 763
Query: 1018 -----------DTKL-------YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLAS 1059
D +L + T +GRAAF + + + + + +L +A++ +L S
Sbjct: 764 QDVNQSTRPAGDRRLFIGQSTRFKLTNIGRAAFKAGIDYKRASAIHRELKQAQKQLILNS 823
Query: 1060 DLHLVYLSTPINV-----EVEP-DWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGA 1113
HL+YL N E+ P D + + + L Q++ +G +E + R+
Sbjct: 824 YSHLLYLVVCFNSNERGDELFPADASILFNVYSALRTESQALFKLLGFTEAHAARLF--- 880
Query: 1114 PMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLE 1173
T+ + G + +L R Y LILS ++ P+
Sbjct: 881 ----------KTQSVQGPMAQQLN-----------------RLYKVLILSDILDLLPLPT 913
Query: 1174 VCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVE 1232
V + V RG +Q L + +S + C+ + ++ + L + +++ E+
Sbjct: 914 VSCKYNVERGTLQHLISQSIAASSALVRLCDEMEEFWCYKPLFERVLHKMDRCGTVELEP 973
Query: 1233 LTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAKKI 1292
L +P VK +RA+ LY AGLRT IA+ +V+ + + L VA +I
Sbjct: 974 LMELPGVKINRAKQLYAAGLRTIEDIAKIRPMTLVQTV-----------EHMPLRVATEI 1022
Query: 1293 KNGARKIVLEK 1303
+ A+ I+++K
Sbjct: 1023 VSAAKIILMKK 1033
>gi|19110784|gb|AAL85275.1|AF436846_1 DNA helicase HEL308 [Mus musculus]
Length = 527
Score = 330 bits (846), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 212/576 (36%), Positives = 313/576 (54%), Gaps = 78/576 (13%)
Query: 528 WQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKA 587
WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+ K L++LPYV+I EK
Sbjct: 1 WQHTCLTLRSVQERKNLIYSLPTSGGKTLVAEILMLQELLCRQKDVLMILPYVAIVQEKI 60
Query: 588 EHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSLVNRMLEEGRLSE 642
L LG V Y G++G P + S+ + TIEKA+SLVN ++E RLS
Sbjct: 61 SSLSSFGIELGFFVEEYAGSKG--RFPPIKRREKKSLYIATIEKAHSLVNALIETSRLST 118
Query: 643 IGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQI 702
+G++V+DELHM+ + +RG +LE+ K+ Y TS ++ QI
Sbjct: 119 LGLVVVDELHMIGEGSRGAILEMTQAKVLY-----TSKTT------------------QI 155
Query: 703 VGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY------SKKMDVVRTI-- 754
+GMSAT+ NV + +L+A Y + FRPV L+E++KV + IY + M R +
Sbjct: 156 IGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDTIYEVDSQAADGMTFSRLLSY 215
Query: 755 LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSD 814
+ L DPD +V L E + +S L+FC S+K CE+ A + KFL K +N +
Sbjct: 216 KYSEALKKMDPDRLVALVTEAI-PNYSCLVFCPSKKNCENVAEMLCKFLSKDYLNHREKE 274
Query: 815 SEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVL 873
I +LR G + PVL+ T+P G+AYHH+GLT EER+++E Y G++ +L
Sbjct: 275 K-----CEVIKSLRNIGNGKVCPVLKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLL 329
Query: 874 TATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEE 933
T TSTLAAGVNLPARRVI R P + F+ +Y+QM GRAGR GIDT GES+L+ + ++
Sbjct: 330 TCTSTLAAGVNLPARRVILRAPYVANTFLKRNQYKQMVGRAGRAGIDTAGESILLLQEKD 389
Query: 934 VKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPF 993
++++ L++ PL +C S H + E G +Q ++ L
Sbjct: 390 KQQVLELIS---GPLETCCS-------HLVEEFTKG--IQAL-----FLSLIGLKEKGLL 432
Query: 994 QDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRARE 1053
Q S D+ CH + T LG+A+F ++ + DL + E
Sbjct: 433 QK--DSCGDNEGLECH------------FRITKLGQASFKGAIDLAYCDTLYRDLKKGLE 478
Query: 1054 GFVLASDLHLVYLSTPINV--EVEPDWELYYERFLE 1087
G VL S LHL+YL+TP ++ + EPDW +Y+++ E
Sbjct: 479 GLVLESLLHLIYLTTPYDLAAQSEPDWMVYFKQVTE 514
>gi|157129922|ref|XP_001661818.1| DNA polymerase theta [Aedes aegypti]
gi|108872031|gb|EAT36256.1| AAEL011649-PA [Aedes aegypti]
Length = 1128
Score = 328 bits (840), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 253/844 (29%), Positives = 399/844 (47%), Gaps = 150/844 (17%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP++I + ++ RGI+++Y WQ ECL + +++R+NL+Y TS GK+ VAEI+M R ++
Sbjct: 313 LPNKIRDLLREFRGITEMYDWQKECLSLPAIVERKNLIYALPTSGGKTLVAEIIMFREVL 372
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ + ++PYVS+ EK L V Y G G G +P + S+ VC
Sbjct: 373 LRNRSVMFIVPYVSLAQEKLAALSPFAVATQFLVEEYSG--GKGMIPPRKRRRKQSIFVC 430
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKA L++ ++E R +EIG+I IDELHM+ + NRG LE+L+TK++
Sbjct: 431 TIEKALVLLDSLIEADRANEIGLICIDELHMIGEPNRGVNLEVLITKVQAIQA------- 483
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
G+QI+GMSAT+ N+A +A ++ A ++ +FRPV L+E++K G+
Sbjct: 484 ----------------GIQIIGMSATIGNLAEIAKFMSADIFSQDFRPVELKEFVKCGSD 527
Query: 743 IYSKKMDVVRTILTAANLGGK-------------DPDHIVELCDEVVQEGHSVLIFCSSR 789
+ K RT L A + + DPDHI+ L E + LIFC ++
Sbjct: 528 MLEIKHGA-RT-LEEAFVNKRTVNYKYSDTDTRIDPDHIIGLVMETI-PNDPCLIFCPTK 584
Query: 790 KGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYH 849
+ CE + + L + + + + + ID L +L G+AYH
Sbjct: 585 RRCEQLCSFLIEHLPDRVADYRAPERK-----TLIDLLEN-DGSTATLLPAAFRLGIAYH 638
Query: 850 HAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQ 909
H+GLT +ER+++E +R ++ ++ TSTLAAGVNLPA+RVI R P I +F+ +RY+Q
Sbjct: 639 HSGLTFDERKLIEDAFRAKVLSLIICTSTLAAGVNLPAKRVIIRSPYIATEFLTLSRYKQ 698
Query: 910 MAGRAGRTGIDTK-GESMLICKPEEVKKIMGLLNESCPPL---HSCLSEDKN-GMTHAIL 964
M GRAGR G + GES+LIC +++ + LL C P+ +S L D + + IL
Sbjct: 699 MVGRAGRAGFGNEGGESILICAQKDIALVCNLL---CSPMDEANSSLHADNFIHLKNLIL 755
Query: 965 EVVAGGIVQTAEDIHRYVRCTLL------------------------------------- 987
+ GI T D+ ++V TLL
Sbjct: 756 SAIGLGICSTRNDVLKFVAKTLLAIQTERLGVNLRSVTDAAITALYKENAIKAKSDGCLR 815
Query: 988 ---NSTKPFQDVVKSAQD------SLRWLCHRKFLEW-NEDTKLYSTTP---------LG 1028
N T F ++ D R L R+ LE ++D KL LG
Sbjct: 816 NPANMTVQFDATDQTQYDFEPGGNGFRELEVRRGLEGSSQDGKLVKIVKKNSRLEVNLLG 875
Query: 1029 RAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY-LSTPINVEVEPDWELYYERFLE 1087
+A+ + E + D+L R E + +LHL++ + E+ P + + F +
Sbjct: 876 KASIRAGFHMERATRAYDELKRVGERLYVNDELHLLWVIVMEDGGEIRPKEDDFISFFNK 935
Query: 1088 LSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDA 1147
LS + + + +S+ Y + M L RL N+L
Sbjct: 936 LSPEETRIAKRFFISD-YTISMI---------------------LSRRLDKIDMNLL--- 970
Query: 1148 QTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG 1207
+RF+ LI+ L P EV F V G VQ L NA AS + FCE+L
Sbjct: 971 ------RRFFRTLIVYNLWNLIPPQEVAVRFTVDAGSVQTLMTNAAATASSLQRFCEQLP 1024
Query: 1208 -WYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEI 1266
++ + L+ + R++ AE++ L +P VK RAR LY+AG + +IA+A S++
Sbjct: 1025 EFWAFDSLLKRMVQRLAHCCTAELIPLMELPAVKIGRARQLYRAGYTSLSSIAKAKSSDL 1084
Query: 1267 VKAL 1270
V +
Sbjct: 1085 VSTV 1088
>gi|26342655|dbj|BAC34984.1| unnamed protein product [Mus musculus]
Length = 749
Score = 327 bits (838), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 194/498 (38%), Positives = 286/498 (57%), Gaps = 53/498 (10%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI KLY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 278 LPSKVRDLYVQLKGIKKLYDWQHTCLTLRSVQERKNLIYSLPTSGGKTLVAEILMLQELL 337
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K L++LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 338 CRQKDVLMILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKG--RFPPIKRREKKSLYIA 395
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKA+SLVN ++E RLS +G++V+DELHM+ + +RG +LE+ L K+ Y TS ++
Sbjct: 396 TIEKAHSLVNALIETSRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLY-----TSKTT 450
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +L+A Y + FRPV L+E++KV +
Sbjct: 451 ------------------QIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDT 492
Query: 743 IYSKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY + + L K DPD +V L EV+ +S L+FC S+K CE+
Sbjct: 493 IYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALVTEVIP-NYSCLVFCPSKKNCEN 551
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL K +N + I +LR G + PVL+ T+P G+AYHH+GL
Sbjct: 552 VAEMLCKFLSKDYLNHREKEK-----CEVIKSLRNIGNGKVCPVLKRTVPFGIAYHHSGL 606
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T EER+++E Y G++ +LT TSTLAAGVNLPARRVI R P + F+ +Y+QM GR
Sbjct: 607 TSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQYKQMVGR 666
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS----EDKNGMTHAILEVVAG 969
AGR GIDT GES+L+ + ++ ++++ L++ PL +C S E G+ L ++
Sbjct: 667 AGRAGIDTAGESILLLQEKDKQQVLELIS---GPLETCCSHLVEEFTKGIQALFLSLIGL 723
Query: 970 GIVQTAEDIHRYVRCTLL 987
I + DI++++ T
Sbjct: 724 KIAASLGDIYQFMSGTFF 741
>gi|149046778|gb|EDL99552.1| rCG37823, isoform CRA_a [Rattus norvegicus]
Length = 735
Score = 322 bits (826), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 198/512 (38%), Positives = 292/512 (57%), Gaps = 65/512 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI +LY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 274 LPSKVRDLYAQLKGIKRLYDWQHTCLTLSSVQERKNLIYSLPTSGGKTLVAEILMLQELL 333
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K LL+LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 334 CRQKDVLLILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKG--RFPPIKRREKKSLYIA 391
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 392 TIEKGHSLVNALIETGRMGTLGLVVVDELHMIGEGSRGATLEMTLAKVLY-----TSKTT 446
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +L+A Y + FRPV L+E++KV +
Sbjct: 447 ------------------QIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDT 488
Query: 743 IYSKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY V + + L K DPD +V L EV+ +S L+FC S+K CE+
Sbjct: 489 IYEVDSRAVDGMTFSRLLNYKYSDALKKVDPDRLVALVTEVIP-NYSCLVFCPSKKNCEN 547
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL + +N H + + I +LR G + PVL+ T+P GVAYHH+GL
Sbjct: 548 VAEMLCKFLSRDYLN-HREEEK----GELIKSLRNVGHGKVCPVLKRTIPFGVAYHHSGL 602
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + F+ +Y+QM GR
Sbjct: 603 TSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQYKQMIGR 662
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQ 973
AGR GIDT GES+L+ + ++ ++++GL+N PL C S H + E G +Q
Sbjct: 663 AGRAGIDTAGESILLLQEKDKQQVLGLIN---GPLEDCHS-------HLVEEFTKG--IQ 710
Query: 974 TAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLR 1005
+ + +L+ F+D++KS + LR
Sbjct: 711 S-------LFLSLIGLKVFFKDLLKSDKRYLR 735
>gi|149046779|gb|EDL99553.1| rCG37823, isoform CRA_b [Rattus norvegicus]
Length = 755
Score = 322 bits (826), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/462 (40%), Positives = 272/462 (58%), Gaps = 46/462 (9%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS++ +Y + +GI +LY WQ CL + V +R+NL+Y TS GK+ VAEILML+ L+
Sbjct: 274 LPSKVRDLYAQLKGIKRLYDWQHTCLTLSSVQERKNLIYSLPTSGGKTLVAEILMLQELL 333
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
K LL+LPYV+I EK L LG V Y G++G P + S+ +
Sbjct: 334 CRQKDVLLILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKG--RFPPIKRREKKSLYIA 391
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEK +SLVN ++E GR+ +G++V+DELHM+ + +RG LE+ L K+ Y TS ++
Sbjct: 392 TIEKGHSLVNALIETGRMGTLGLVVVDELHMIGEGSRGATLEMTLAKVLY-----TSKTT 446
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
QI+GMSAT+ NV + +L+A Y + FRPV L+E++KV +
Sbjct: 447 ------------------QIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDT 488
Query: 743 IYSKKMDVVRTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCES 794
IY V + + L K DPD +V L EV+ +S L+FC S+K CE+
Sbjct: 489 IYEVDSRAVDGMTFSRLLNYKYSDALKKVDPDRLVALVTEVIP-NYSCLVFCPSKKNCEN 547
Query: 795 TARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGL 853
A + KFL + +N H + + I +LR G + PVL+ T+P GVAYHH+GL
Sbjct: 548 VAEMLCKFLSRDYLN-HREEEK----GELIKSLRNVGHGKVCPVLKRTIPFGVAYHHSGL 602
Query: 854 TVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGR 913
T +ER+++E Y G++ + T TSTLAAGVNLPARRVI R P + F+ +Y+QM GR
Sbjct: 603 TSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQYKQMIGR 662
Query: 914 AGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSED 955
AGR GIDT GES+L+ + ++ ++++GL+N HS L E+
Sbjct: 663 AGRAGIDTAGESILLLQEKDKQQVLGLINGPLEDCHSHLVEE 704
>gi|328778032|ref|XP_003249435.1| PREDICTED: helicase POLQ-like [Apis mellifera]
Length = 771
Score = 317 bits (813), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 183/443 (41%), Positives = 258/443 (58%), Gaps = 50/443 (11%)
Query: 518 KKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVL 577
K RGI+ LY WQ +CL++D + R+NL+Y TS GK+ VAEILML+ L K A+ +L
Sbjct: 105 KIRGINTLYQWQHDCLNLDAIKNRKNLIYALPTSGGKTLVAEILMLQELTCNKKNAIFIL 164
Query: 578 PYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSLVN 632
P+V+I EK + + LG V Y +G + P K S+ +CTIEKA L+N
Sbjct: 165 PFVAIVQEKIQAMTPFALELGFLVEEYAATKG--TFPPKKRRKKNSIYICTIEKALGLIN 222
Query: 633 RMLEEGRLSEIGIIVIDELHMVADQN-RGYLLELLLTKLRYAAGEGTSDSSSGENSGTSS 691
++EE RL EIGIIV+DELH++ + RG LE+LLTK+ Y
Sbjct: 223 SLIEEKRLHEIGIIVVDELHLLGENGGRGATLEVLLTKVLYVN----------------- 265
Query: 692 GKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVV 751
D H I+GMSAT+ N+ +A +L A LY NFRP+ ++EY+K I+ +
Sbjct: 266 ---DNIH---IIGMSATIGNLEEIATFLNADLYTGNFRPIEIKEYVKCDENIWLVDLKTE 319
Query: 752 RTILTAANLGGK--------DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFL 803
+ + + DPD I L +++ E HS LIFCSSRK CE+ A ++K L
Sbjct: 320 ELLTDVKKINYRYSKDAAIIDPDRIAGLVMDIIPE-HSCLIFCSSRKNCENVALLLTKVL 378
Query: 804 KKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVET 863
K S+ + SD + + ++AL+ GL P+L +T+ GV YHH+GLT EER ++E
Sbjct: 379 PK-SLQDYKSDKK----QNLLNALKN-EEGLCPILSKTINFGVVYHHSGLTSEERRLLED 432
Query: 864 CYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKG 923
++ G + V+ TSTLA G+NLPARRVI R P IG F++ +RY+QM GRAGR G+ G
Sbjct: 433 AFKIGTLCVICCTSTLATGINLPARRVILRSPYIGNQFLNLSRYKQMVGRAGRAGMGNIG 492
Query: 924 ESMLICKPEEVKKIMGLLNESCP 946
ES+LICK E++K + SCP
Sbjct: 493 ESILICKNNELQKDIS----SCP 511
Score = 76.6 bits (187), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
Query: 1151 RVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WY 1209
RV RFYV LIL L + V ++ E + ++RG+VQ L FA V FC+ L ++
Sbjct: 606 RVIHRFYVTLILYDLWNQHAVYKIAEKYDISRGIVQNLLTAVSSFAFSVIRFCQELDEFW 665
Query: 1210 DLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKA 1269
+ L+ F ++S+ E+ L +P VK SRAR LY AG +T IA+ ++ +K
Sbjct: 666 AFKDLLNVFSKKLSYCCPLELEALMDLPLVKISRARQLYNAGFKTIQDIAK---TQPIK- 721
Query: 1270 LFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
L E ++++ +A +I GA+ +++EK E
Sbjct: 722 LQEKIPYLSKK-------IAMQIIEGAKLLIVEKIE 750
>gi|167383171|ref|XP_001736435.1| DNA double-strand break repair Rad50 ATPase [Entamoeba dispar SAW760]
gi|165901222|gb|EDR27340.1| DNA double-strand break repair Rad50 ATPase, putative [Entamoeba
dispar SAW760]
Length = 835
Score = 312 bits (800), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 226/795 (28%), Positives = 401/795 (50%), Gaps = 109/795 (13%)
Query: 517 YKKRGISKLYPWQVECLHVDGVLQ-RRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
Y+KRGI +L+ WQ ECL GV + NLVY A TS+GK+ V+EILM+ R T K +
Sbjct: 49 YEKRGIKELFEWQEECLKEKGVREGEENLVYSAPTSSGKTLVSEILMIERYCQTQKKMIY 108
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRML 635
++PYVS+ EK E+ + +LE + +++ Y+ N+ + K+ + + TIEK N ++N+M+
Sbjct: 109 IVPYVSMAQEKEEYFKEILESIKINIKGYFQNR---KIDKEFDIGIFTIEKGNGIINKMI 165
Query: 636 EEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKAD 695
EE + E+ II+IDE+HMV D+ RG ++E ++ K+ G+ K
Sbjct: 166 EEKSIEEVSIIIIDEIHMVFDKKRGQIIEKIINKI-----------------GSLEKK-- 206
Query: 696 PAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTIL 755
+QI+GMSAT+ N++ W++A YE+ +RP+ +EEYI + +K+ + + +
Sbjct: 207 ----IQIIGMSATIKNISIFEKWIKAKTYESTYRPIKIEEYIVCKGKVRNKEGKIEKILK 262
Query: 756 TAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDS 815
D ++I+E+ +E +EG V+ FCS++KGCE + + K ++K I + +
Sbjct: 263 EEG-----DIENIIEITEEAKKEGKGVICFCSTKKGCEKMGKEIVKRIEKKKIEEINKEI 317
Query: 816 EFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTA 875
+ I I + R G++ + + G+ YHH+G+T+EERE++E ++KG++ ++ A
Sbjct: 318 KEERI-EMIKEMERSKFGIEEEFKNMIKYGIVYHHSGITIEEREIIEKSFKKGIITLIIA 376
Query: 876 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEE-- 933
TSTLA GVNLPA RVIF + +IG++++ T+Y+QM+GRAGR GID KGES + CK E
Sbjct: 377 TSTLALGVNLPASRVIFDKAKIGKEYLTNTQYQQMSGRAGRFGIDEKGESYIFCKEIEIP 436
Query: 934 -VKKIMGLLNESCPPLHSCLSEDKNGMTHA--------------ILEVVAGGIVQTAEDI 978
++ IM +N + + E K ILE + GI++ +DI
Sbjct: 437 IIQNIMKTINNNNKEIKEEKQEIKEIEEEIEEIKEEQEIQDKEDILEGIYNGIIENKKDI 496
Query: 979 HRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKF-------------LEWNEDTKLYSTT 1025
+++ TL +++ K + + + K +E + K
Sbjct: 497 EKWIEKTLY----WYKNKEKKGAEEWKKIYSEKIINILKNDEGLIEEIENEKGEKKIKCN 552
Query: 1026 PLGRAAFGSSLCPEESLIVLDDLSRAREGFV----LASDLHLVYLSTPINVEVEPDWELY 1081
+GRA + +S + +++ EGF+ + + YL IN + E +W +
Sbjct: 553 QIGRAIVKGGMGINKSKEIYFNIN---EGFLKNNNNIINKEIYYLYLGINYDNEINWNCF 609
Query: 1082 YERFLELSALD----------QSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGK 1131
++ ++ L + + N +G++ ++ M +++S+K+
Sbjct: 610 EKKLEDIEDLKNKKINLYNEFKELMNIIGINPVFICYMETMKNVKLSNKI---------- 659
Query: 1132 LEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQEN 1191
+ + K+FY +IL + E +L++ + RG++Q LQ N
Sbjct: 660 ---------------INKIFIHKKFYYLIILYEFINEKNILQIINEMGITRGILQQLQNN 704
Query: 1192 AGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAG 1251
+M+ F L ++DL + +R+ FGVR +I+++ + + AR + G
Sbjct: 705 TITTLNMIIQFSIELNYFDLSQNLKLLIDRIKFGVRTDILQIIHLDGISIKIARTFFLFG 764
Query: 1252 LRTPLAIAEASISEI 1266
L IA S +I
Sbjct: 765 LNNISKIAHTSFLDI 779
>gi|428179719|gb|EKX48589.1| hypothetical protein GUITHDRAFT_162401 [Guillardia theta CCMP2712]
Length = 2380
Score = 310 bits (795), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 207/535 (38%), Positives = 299/535 (55%), Gaps = 62/535 (11%)
Query: 488 DEA---GTPSSSGMLKDCLDLSSWL-----PSEICSIYKKRGISKLYPWQVECLHVDGVL 539
DEA T SS L+D SWL P+ + Y + G+ +LY WQV CL L
Sbjct: 162 DEALSTSTNGSSSALEDEELSQSWLRAWEIPAGVRQAYVELGMRELYEWQVHCLVSTSAL 221
Query: 540 QRR-NLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLG 598
RR NLVY A TS GK+ VAEIL +R L+ T + L V+PYVS+ EK E+ LL+ G
Sbjct: 222 SRRTNLVYSAPTSGGKTLVAEILTIRCLLLTKRRVLFVVPYVSLVLEKVEYFRELLQ--G 279
Query: 599 RHVRSYYGNQGGGSLPKD----TSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMV 654
VR +G L + +++CTIEKA+S+VN++L E + E+G +V+DE M+
Sbjct: 280 EEVRVEGYCRGAQLLTRSHADLVELSICTIEKASSIVNQLLVEKKGEELGAVVVDEAQML 339
Query: 655 ADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAA 714
D RG L+E+LLTK+ + S SS+ +QI+ +SAT+ N+
Sbjct: 340 GDVGRGCLVEILLTKVLF------SLSST----------------VQIICLSATVANMEE 377
Query: 715 VADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGK--DPDHIVELC 772
+A WL+A LY ++FRPVPL E++ V + K VVR + GG+ D D IV LC
Sbjct: 378 LAMWLEAELYVSDFRPVPLLEHVVVELKVEDKGGKVVRELQ-----GGRHVDRDGIVMLC 432
Query: 773 DEVVQEGHSVLIFCSSRKGCESTARHVSKFLK----KFSINVHSSDSEFIDITSAIDALR 828
+E + + + L+FCS+R+ E A+ V+ L+ + + S ++ALR
Sbjct: 433 EEALAQSQTALVFCSTRRSAEMCAKFVADNLQGDRQEGEEGGEEEKRKRAKRESMLEALR 492
Query: 829 RCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPAR 888
G+D VL++T+ +GVA+HHAG+TVEER VVE+ +R G V +L TSTLAAGVNLPA
Sbjct: 493 NSAGGVDQVLQQTIRAGVAFHHAGMTVEERMVVESAFRGGDVSILMCTSTLAAGVNLPAD 552
Query: 889 RVIFRQPRIGRDFIDGTRYRQMA----GRAGRTGIDTKGESMLICKPEEVKKIMGLLNES 944
RVIFR P IG DF+D RYRQMA G GES ++C+ ++ ++ LL
Sbjct: 553 RVIFRSPFIGCDFLDVNRYRQMAGRAGRAGRGGGAGGAGESFVVCERKDAGRVRALLAGK 612
Query: 945 CPPLHSCLSEDK----------NGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNS 989
PP+ S L + + +G+ AILE + +V+ E++ R++R + L S
Sbjct: 613 LPPVCSRLVDREMWGRRRPLALSGLRRAILEALDNELVREEEEVMRFLRKSFLYS 667
Score = 120 bits (301), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 138/277 (49%), Gaps = 25/277 (9%)
Query: 1001 QDSLRWLCHRKFLEWNEDTK----LYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFV 1056
Q++LRWL + + T+ ++ T LG+AA S + PE++ +V +DL A
Sbjct: 754 QEALRWLFASN-MSRRQGTRAGEVIFFCTHLGKAAVRSGMSPEDAAMVQEDLKEAMSSLA 812
Query: 1057 LASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMR 1116
+ DLHL++L +P++ ++ W ++ F L + + +VGV E +LMR
Sbjct: 813 MEDDLHLLFLVSPLS-DLSVPWPHLFDIFQSLPPPCRRIAERVGVQERFLMRAR------ 865
Query: 1117 ISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCE 1176
LHG +S++ A L++ RF+ ALIL L+ E + +V
Sbjct: 866 -----------LHGVSSSSSSSSSSSCWQRA--LQIHSRFFCALILRDLLLERKIPDVAL 912
Query: 1177 TFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTI 1236
F V RG VQ LQE A FA VS FC RL W+ L+ L A+ Q R+ V ++++ L
Sbjct: 913 KFHVPRGRVQQLQEEAAAFAGTVSSFCARLRWWQLQVLTAELQERMRASVSSDVLLLLRC 972
Query: 1237 PYVKGSRARALYKAGLRTPLAIAEASISEIVKALFES 1273
P +K AR L + G+ + A+ A++ + + + S
Sbjct: 973 PSMKSWWARGLVEEGIGSLKALGAAAVGRVARVVSSS 1009
Score = 117 bits (292), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 142/316 (44%), Gaps = 89/316 (28%)
Query: 1860 RISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKI 1919
R S S + +Q + TGR++ PNLQC+ K E
Sbjct: 1353 RSSTSIANFLFRSLHVQDACGTGRIATRSPNLQCLP-----KRRRER------------- 1394
Query: 1920 NARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG------DVFTMIAA 1973
+ARD + ++E +L++AD+SQ+ELR++AH SKD L L + HG DVF +AA
Sbjct: 1395 SARDAIV-AREGCVLMSADFSQLELRIIAHLSKDMRLAAAL-EGHGQQAGAVDVFCAMAA 1452
Query: 1974 RWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVA 2033
W D V +ER + K++ YGILYGMG N+L++ L S+ EA + +++FK+++ +
Sbjct: 1453 MWLKVPADKVSEEERQRAKKVCYGILYGMGLNSLAQDLRVSTAEANQMLQAFKATYHKTS 1512
Query: 2034 SWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIA 2093
W+ G+A+DI++ A
Sbjct: 1513 EWI----------------------------------------------MGTASDILRAA 1526
Query: 2094 MINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCM 2153
+I +L+AN + + ++++QVHDE+++EV + CM
Sbjct: 1527 LI---------------ALSANLK--EEEAKIVMQVHDEVIVEVRSEAAHTVAQQLSDCM 1569
Query: 2154 ESAALLLVPLLVKIQV 2169
A + PL VK+ +
Sbjct: 1570 RGACDISPPLRVKLSL 1585
>gi|115388473|ref|XP_001211742.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195826|gb|EAU37526.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 528
Score = 307 bits (787), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 266/506 (52%), Gaps = 29/506 (5%)
Query: 768 IVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDAL 827
+V L + G+ L+FC SR+GC+ A +S+ + S E + + L
Sbjct: 1 MVALAVDTAAAGYGALVFCGSRQGCQIHASTISEAMPAQS---AVDPEELVKRLDLLAEL 57
Query: 828 RRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPA 887
R P+GLDPVLE TL GV +HHAG+T EERE++ Y +G ++VL AT +LAAGVNLPA
Sbjct: 58 RSLPSGLDPVLETTLVKGVGFHHAGMTTEERELIAQAYDQGALKVLVATCSLAAGVNLPA 117
Query: 888 RRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPP 947
RRVI R+GR+ + RQM GRAGR G D GE+ LIC +++ + LL P
Sbjct: 118 RRVIINGARMGRELVGPAMLRQMCGRAGRKGKDEVGETYLICGKSDLQAVCDLLEADMPA 177
Query: 948 LHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWL 1007
+ SCL+ +K G+ A+LE +A G+V + I YV+CTLL T + +L L
Sbjct: 178 IESCLAPEKRGLKRALLEAIATGLVSGYDAIKEYVKCTLLYRTMDKKIAYSIMHSALEEL 237
Query: 1008 CHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLS 1067
+ K L N+D Y T LG+A S+ PE+ L V ++LSRA + FV+ ++H+ Y+
Sbjct: 238 INEKLLRQNDDES-YGATQLGQAVVASAFAPEDGLFVHEELSRALQAFVMDGEMHIFYMF 296
Query: 1068 TPINVEV--EPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDST 1125
TP+ + + + DW ++ ++ EL VGV ++ M + L++ST
Sbjct: 297 TPLQMAMNTQIDWLVFRDQLDELDESGLRALQFVGVQPGFVNTMVQS-----GASLKEST 351
Query: 1126 KGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMV 1185
+ R+ +R Y A L L E P+ + +++ RG +
Sbjct: 352 P------------------EQVKLARIYRRAYTAFQLRDLSNEVPLSVIANRYRIPRGAI 393
Query: 1186 QALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1245
Q L + FA+ + FC+R+GW L ++ ++R+ G RA+++E+ + YVKG AR
Sbjct: 394 QTLAQQCHGFAAGMVKFCQRMGWGMLAAVLDHMRDRLEAGARADLLEMAQVTYVKGWTAR 453
Query: 1246 ALYKAGLRTPLAIAEASISEIVKALF 1271
L + G R A+AEA ++V L
Sbjct: 454 LLRENGFRNLRALAEADAKDLVPVLM 479
>gi|158300279|ref|XP_551895.3| AGAP012297-PA [Anopheles gambiae str. PEST]
gi|157013082|gb|EAL38704.3| AGAP012297-PA [Anopheles gambiae str. PEST]
Length = 914
Score = 307 bits (786), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 275/505 (54%), Gaps = 61/505 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+ + I + RGI LY WQ ECL + + +RRNL+Y TS GK+ VAEILMLR +I
Sbjct: 90 LPNTVRRILRDFRGIDDLYDWQRECLALPAIQERRNLIYALPTSGGKTLVAEILMLREII 149
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ + ++PYVS+ EK L L + Y G G G P K ++ VC
Sbjct: 150 CRLRNVIFIVPYVSLAQEKMIALSPFALELQFLLEEYSG--GKGQCPPRKRRKKNTIFVC 207
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKA L++ ++E GR +EIG+IVIDELHM+ +Q RG LE+++TK++
Sbjct: 208 TIEKALLLLDSLVEVGRANEIGLIVIDELHMIGEQRRGACLEMMITKVQVLRA------- 260
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
G+QIVGMSAT+ N+ VA ++ A +Y +FRPV L+E++K G+
Sbjct: 261 ----------------GIQIVGMSATIGNLTEVARFMLADVYSRDFRPVELKEFVKCGDD 304
Query: 743 IYSKKMDVVRTILTAANLGGK----------------DPDHIVELCDEVVQEGHSVLIFC 786
+Y+ + +A N+ G+ D DH+V L EV+ E S L+FC
Sbjct: 305 LYAVRSKGQADGGSAENVFGEKRALEFADCSEELRRLDTDHVVRLILEVIPES-SCLVFC 363
Query: 787 SSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGV 846
++ CES ++ L + + E I I +L+ + PVL + GV
Sbjct: 364 PTKSKCESLCALLANHLPARLAEHRAEEKEQI-----IRSLKE-DGSIAPVLPQAFRVGV 417
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
AYHHAGLT +ER +E YR G++ ++ TSTLAAGVNLPA+RVI R P IG F+ +R
Sbjct: 418 AYHHAGLTQDERRTIEDAYRAGILSLIVCTSTLAAGVNLPAKRVIIRSPYIGNSFLSLSR 477
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLH----SCLSEDKNGMTHA 962
Y+QM GRAGR G GES+LIC ++ ++ +L C P+ + +++D+
Sbjct: 478 YKQMVGRAGRAGFGETGESILICAQRDIPQVCEML---CAPMDIAESALIADDRAYFKSL 534
Query: 963 ILEVVAGGIVQTAEDIHRYVRCTLL 987
IL + + ++ + + VRCTLL
Sbjct: 535 ILSAIGLDLCESRDALQALVRCTLL 559
Score = 49.7 bits (117), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 36/248 (14%)
Query: 1027 LGRAAFGSSLCPEESLIVLDDLSRAREGFVLASD---LHLVYLSTPINVEVEPDWELYYE 1083
LG+AA + E+++ D++ E + + LHL+ L V+++PD
Sbjct: 660 LGKAAIRAGFNMEKAVRFYDEMKVLGERLCVLDEYDLLHLILLEDGREVQLKPD------ 713
Query: 1084 RFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNM 1143
F+ L ++Q Q+ ++E Y + GL K+ R + S +M
Sbjct: 714 DFIVL--VNQLTNEQLKIAERYGI-----------------NNGLIAKILTR-RVASGDM 753
Query: 1144 LSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFC 1203
+S RF LI+ L ++TP+ EV + V G +Q L + A + C
Sbjct: 754 VSKMM------RFVRVLIVHELWKQTPLAEVASRYHVNAGSLQTLMTSTAGTAFSLLRMC 807
Query: 1204 ERLG-WYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEAS 1262
E + + + L+ R++ + E++ L T+P VK RAR L++AG T +IA A+
Sbjct: 808 EEIPELWAFKHLLTGMTERLTHYCKLELLPLLTLPSVKLGRARQLFRAGYTTLASIARAT 867
Query: 1263 ISEIVKAL 1270
E+V+ +
Sbjct: 868 SRELVETI 875
>gi|290983714|ref|XP_002674573.1| predicted protein [Naegleria gruberi]
gi|284088164|gb|EFC41829.1| predicted protein [Naegleria gruberi]
Length = 829
Score = 306 bits (783), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/427 (38%), Positives = 255/427 (59%), Gaps = 17/427 (3%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP ++K+ +G+ KLY WQ + L + + +N++Y TS GK+ +AEILM+R
Sbjct: 140 LPHSCAELFKEVKGVHKLYEWQEQLLSMPELRMGKNVLYSLPTSGGKTLIAEILMIRTCQ 199
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKA 627
K +L VLPYVSIC EK +E++ + + V Y+ ++G + + +CTIEKA
Sbjct: 200 LMKKKSLFVLPYVSICEEKTTTMELISDQMNFFVEGYFASKGKIPVDPGNQLIICTIEKA 259
Query: 628 NSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS--SSGE 685
N +++ ++ E R+ E+G +V+DELHM+ + RG LLE L++K+ Y E + E
Sbjct: 260 NLILDNLIREERIHELGCVVVDELHMIGEGGRGQLLEQLISKILYIQREKKTVEIIIDDE 319
Query: 686 NSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS 745
T+ K + +Q+VGMSAT+PN+ +A W+ A L++++FRPVPL+E+ +G ++
Sbjct: 320 LENTTQTKIENI-SIQLVGMSATIPNLEQIAQWMDAVLFKSDFRPVPLKEFYCIGENVFD 378
Query: 746 KKMDVVRTILTAANLGGK---DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKF 802
K+ + VRT+ + + GK DPD I LC EV+ S LIFC S++ CE +H++
Sbjct: 379 KEGNTVRTLTSIPSEMGKGKNDPDFITSLCCEVI-PAKSALIFCPSKQSCEDCVKHLTCT 437
Query: 803 LKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVE 862
L + VH D+ + + + D L + GV YHH+ LT EER+++E
Sbjct: 438 LPLSNDYVHEKK----DLVANLKLI----GTNDTNLFNGIMYGVVYHHSSLTSEERQLIE 489
Query: 863 TCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIG-RDFIDGTRYRQMAGRAGRTGIDT 921
YR ++ V+ TSTLAAG+NLPA RVIF P IG + F+ ++Y QM+GR+GR GID+
Sbjct: 490 NAYRNHIICVICCTSTLAAGINLPAARVIFNTPYIGFKQFLTKSKYMQMSGRSGRAGIDS 549
Query: 922 KGESMLI 928
GES L+
Sbjct: 550 FGESYLV 556
Score = 74.7 bits (182), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 56/251 (22%)
Query: 1028 GRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVY-LSTPINVEVEPDWELYYERFL 1086
GRA S E L++L + +G +++ DLH++Y + PI+
Sbjct: 543 GRAGIDSF--GESYLVILQQIQD--DGIIISDDLHILYVIGVPID--------------- 583
Query: 1087 ELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNML-- 1144
GN G+ EP +++ + L L K+ R+GI N +L
Sbjct: 584 ---------GN--GLIEPNYVKLLN--------YLEQCATPLEKKIIARIGIPENAILTK 624
Query: 1145 --------SDAQTLRVCKRFYVALILSRLVQE-TPVLEVCETFKVARGMVQALQENAGRF 1195
SDA+ + KR Y A I+ L+ E T ++ CE RGM+Q L A F
Sbjct: 625 AMNKYSKISDAEQYTI-KRLYNAFIIRDLINERTNFIDHCEI--KGRGMIQQLMSQACTF 681
Query: 1196 ASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSR-ARALYKAGLRT 1254
SMV FCE L ++ + + K+ R+ +GV+++IV+L + VK + AR L ++ L
Sbjct: 682 CSMVQQFCETLEFWQIAKIAKKYIRRIQYGVKSDIVDLVQLEGVKRAEIARILKESSL-- 739
Query: 1255 PLAIAEASISE 1265
L I ISE
Sbjct: 740 SLEILSKLISE 750
>gi|426341774|ref|XP_004036199.1| PREDICTED: DNA polymerase theta [Gorilla gorilla gorilla]
Length = 2363
Score = 304 bits (779), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 159/369 (43%), Positives = 228/369 (61%), Gaps = 27/369 (7%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W LP + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 73 DKLLLANWELPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 132
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 133 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDI 192
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTS 679
AVCTIE+AN L+NR++EE ++ +G++V+DELHM+ D +RGYLLELLLTK+ Y T
Sbjct: 193 AVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI----TR 248
Query: 680 DSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKV 739
S+S + SS ++ +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E +KV
Sbjct: 249 KSASCQADLASS----LSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKV 304
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
GN+IY M +VR + G D DH+V LC E +++ HSVL+FC S+K CE A +
Sbjct: 305 GNSIYDSSMKLVREFEPMLQVKG-DEDHVVSLCYETIRDNHSVLLFCPSKKWCEKLADII 363
Query: 800 SKFLKKFSINVHSSDSEFI-------------DITSAIDALRRCPAGLDPVLEETLPSGV 846
++ N+H + ++ +D LRR P+GLD VL++T+P GV
Sbjct: 364 AREF----YNLHHQAEGLVKPSECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGV 419
Query: 847 AYHHAGLTV 855
A+HHAG+
Sbjct: 420 AFHHAGIVT 428
Score = 247 bits (630), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 264/531 (49%), Gaps = 81/531 (15%)
Query: 1725 LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY LAG
Sbjct: 1836 LLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAG 1895
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHPSTD 1821
FS ++ DIA VL+ LKLP P G K G+Q ST
Sbjct: 1896 HSFSFTSSDDIAEVLFLELKLP-PNGEMKNQGSKKTLGSTRRGIDNGRKLRLGRQF-STS 1953
Query: 1822 KHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTAT 1881
K L+ L+ HP+ ++ E R + + + + R++ ++ Q+ TAT
Sbjct: 1954 KDVLNKLKALHPLPGLVLEWRRITNAITKVVFPLQREKRLNPFLGMERIYP-VSQSHTAT 2012
Query: 1882 GRLSMEEPNLQCVEHMVEFKMSN-------------------EDIYGGNAEVD-HCK--- 1918
GR++ EPN+Q V E KM Y V+ C+
Sbjct: 2013 GRITFTEPNIQNVPRDFEIKMPTLVGESPPSQAVGKGLLPMGRGKYKKGFSVNPRCQAQM 2072
Query: 1919 ------------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
I+ R F+P IL AADYSQ+ELR++AH S D LI +L+ D
Sbjct: 2073 EERAADRGMPFSISMRHAFVPFPGGSIL-AADYSQLELRILAHLSHDRRLIQVLNT-GAD 2130
Query: 1967 VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFK 2026
VF IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A I SFK
Sbjct: 2131 VFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFK 2190
Query: 2027 SSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSA 2086
S + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQA+N+I QGSA
Sbjct: 2191 SRYTGINQFMTETVKNCKRDGFVQTILGRRRYLPGIKDNNPYRKAHAERQAINTIVQGSA 2250
Query: 2087 ADIIKIAMINI-------HSIIVG-----GVYKPDSSLAANFQMLKGR-CRL-----LLQ 2128
ADI+KIA +NI HS G+ + D + + + L+G C + +LQ
Sbjct: 2251 ADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDRTGLSRKRKLQGMFCPIRGGFFILQ 2310
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+HDEL+ EV + + +V+ MESA L V L VK+++G++WG L+ F
Sbjct: 2311 LHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDF 2361
Score = 109 bits (272), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 40/247 (16%)
Query: 1035 SLCP------EESLIVLDDLSRAREGF--VLASD------LHLVYLSTPINVE-VEPDWE 1079
S CP +E L V+D L R G VL H + TP+ + DW
Sbjct: 381 SECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGIVTPMFEDWTTIDWY 440
Query: 1080 LYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGIT 1139
++ + +L + V VGV E +L R G K+ T+ H
Sbjct: 441 RFFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVARTERQH---------- 483
Query: 1140 SNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMV 1199
+ + + KRF+ +L+L L+ E P+ E+ + + RG +Q+LQ++A +A M+
Sbjct: 484 --------RQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMI 535
Query: 1200 SVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIA 1259
+VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR LY +G T +A
Sbjct: 536 TVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLA 595
Query: 1260 EASISEI 1266
A+I E+
Sbjct: 596 RANIVEV 602
>gi|339242739|ref|XP_003377295.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316973917|gb|EFV57460.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 524
Score = 303 bits (776), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 259/442 (58%), Gaps = 38/442 (8%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVL-QRRNLVYCASTSAGKSFVAEILMLRRLI 567
+P ++ + Y + GI KL+ WQ +CL + GVL + NLVY A TSAGK+ VAEIL+L+R++
Sbjct: 48 IPEDVVTCYNQMGIVKLFAWQYQCLTLPGVLSEGANLVYSAPTSAGKTLVAEILLLKRVL 107
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYG--NQGGGSLPKDTSVAVCTIE 625
T + AL +LP+VS+ EK +L + +G V+ Y G N GG D VAVCTIE
Sbjct: 108 QTRRRALFILPFVSVAREKMLYLNSVFRNVGVQVQGYMGTLNPSGGFHSWD--VAVCTIE 165
Query: 626 KANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGE 685
KAN L+NR++EE ++ +G +V+DELH+V + RG +LELLLTKL + + S+ S
Sbjct: 166 KANGLINRLVEEENVNCLGCVVVDELHIVNENYRGKILELLLTKLIHFNQKLQSEFKSDR 225
Query: 686 NSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS 745
+Q++ MSAT+PN+ A WL A + T RPVPL EYI ++
Sbjct: 226 --------------IQLIAMSATLPNLETCAQWLGAKAFRTYHRPVPLTEYIFHCGQFFT 271
Query: 746 KKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKK 805
K ++R L + KD D+++ LC E V + VLIFCS++ CE A ++ K+
Sbjct: 272 KDGQMLRK-LPGNFILNKDNDNVIGLCLETVVQDSGVLIFCSTKVWCERLASLIADAFKE 330
Query: 806 FSIN---VHSSDSEFI---DITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
I + +FI I + +D VL++TLP VA+HHAGLT+EERE
Sbjct: 331 LFIQDGWLSIQLKKFIHPDKQAKYIADFAKATGNVDSVLKKTLPVAVAFHHAGLTMEERE 390
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFR---------QPRIGRDFIDGTRYRQM 910
+E+ +R GL++VL AT+TL++GVNLPA+RVI R P + ++ Y+QM
Sbjct: 391 KLESGFRNGLIKVLVATTTLSSGVNLPAKRVIIRSLWGNPNGPNPALC---LNSCTYKQM 447
Query: 911 AGRAGRTGIDTKGESMLICKPE 932
GRAGR G+D++G + + E
Sbjct: 448 IGRAGRKGMDSEGMCLRVVLKE 469
>gi|195588631|ref|XP_002084061.1| GD14056 [Drosophila simulans]
gi|194196070|gb|EDX09646.1| GD14056 [Drosophila simulans]
Length = 1011
Score = 302 bits (774), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 244/828 (29%), Positives = 381/828 (46%), Gaps = 129/828 (15%)
Query: 516 IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALL 575
I + +GI LY WQ ECL++ + QR+NL+Y TS GK+ VAEILMLR L+ + L
Sbjct: 256 ILEHKGIKSLYEWQNECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCCERNVLF 315
Query: 576 VLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSL 630
+LPYVSI EK + L V Y G G P K S+ + +IEK L
Sbjct: 316 ILPYVSIVQEKVSAMSPFAIDLDFIVEEYTA--GKGKCPPQPRRKRRSLFIASIEKGAVL 373
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
++ +++ R EIG++V+DELH++ ++ RG LE LTK+ +
Sbjct: 374 MDSLIDVQRPHEIGLVVVDELHLIGEKGRGATLEAFLTKVMFLNA--------------- 418
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY--SKKM 748
+QIVGMSAT+ N++ ++ +L A +Y FRPV L+EYIK G + +
Sbjct: 419 --------NIQIVGMSATIGNLSEISSFLNADVYTRGFRPVELKEYIKCGPDLLEINSAG 470
Query: 749 DVVRTILTAAN---------LGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
+ I + + DPDH+ L E E H L+FC SRK CE+ A +
Sbjct: 471 QTLEEIFVPSRSVEYNYSEAVKRADPDHLAGLISECAPE-HCCLVFCPSRKNCENVALLL 529
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEERE 859
S+ + K H SE +D+ +DAL + L PVL +TLP G+AYHH+GLT +ER+
Sbjct: 530 SRIVPKHKFFEHRR-SEKLDL---MDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERK 585
Query: 860 VVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGI 919
+ET YR G+V V+ TSTLAAGVNLPA+R D QM +
Sbjct: 586 YIETAYRFGVVTVICCTSTLAAGVNLPAKRS-----------KDNLLVGQMLFSPMDKAL 634
Query: 920 DTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAED-- 977
+ ++ + + ++GL C D N + ++ L V ++ A D
Sbjct: 635 SSLDQNEAVGLQSLILSVVGLNLAEC-------RRDLNRLVNSTLLSVQAKSLEVAVDEI 687
Query: 978 IHRYVRCTLLNSTKPF-----------QDVVKSAQDSL--RWLCHRKFLEWNEDTKLYST 1024
+ R +R N D++ S S R R+ L T +
Sbjct: 688 VLRILREMFKNKVLQLAEPQAKSKINSSDIITSQDVSQANRPAGDRRLLIGQSTT--FKL 745
Query: 1025 TPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV-----EVEP-DW 1078
T +GRAAF + + + + + +L +A++ +L + LHL+YL N E+ P D
Sbjct: 746 TNIGRAAFKAGIDYKRANAIHKELKQAQQQLILTNYLHLLYLVVCFNTNERGDELFPADA 805
Query: 1079 ELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGI 1138
+ + + L Q++ Q+G +E + R+ T+ + G L +L
Sbjct: 806 SILFGVYTSLPLDSQAMFKQLGFTEAHAARLF-------------KTQSVQGPLSLQLN- 851
Query: 1139 TSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASM 1198
R Y LIL+ ++ P+ V + V RG +Q L + AS
Sbjct: 852 ----------------RMYKVLILADILNLLPIPSVASKYNVERGTLQHLISQSTAAASA 895
Query: 1199 VSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLA 1257
+ CE L ++ + L + +++ E+ L +P VK +RAR LY AG +T
Sbjct: 896 IVRLCEELEEFWCYKPLFERILHKMDRCGTFELEPLMELPAVKINRARQLYAAGFQTIGD 955
Query: 1258 IAEASISEIVKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAE 1305
IA S++V+ L + L VA +I + A+ I+++K +
Sbjct: 956 IARVRPSQLVQCL-----------EHMPLRVATEIVSAAKIILMKKLD 992
>gi|312384326|gb|EFR29076.1| hypothetical protein AND_02273 [Anopheles darlingi]
Length = 1206
Score = 302 bits (773), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/506 (36%), Positives = 275/506 (54%), Gaps = 61/506 (12%)
Query: 509 LPSEICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LPS + I + RGI +LY WQ ECL + V +RRNL+Y TS GK+ VAEILMLR ++
Sbjct: 380 LPSSVRRILRDFRGIGELYDWQRECLELPAVRERRNLIYALPTSGGKTLVAEILMLREVL 439
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVC 622
+ + ++PYVS+ EK L L + Y G G G P K ++ VC
Sbjct: 440 CRLRNVIFIVPYVSLAQEKMIALSPFSIELQFLLEEYSG--GKGQCPPRRRRKKNTIFVC 497
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKA L++ ++EE R +EIG+IVIDELHM+ + RG LE+L+TK++
Sbjct: 498 TIEKAMMLMDSLVEESRANEIGMIVIDELHMIGEPRRGACLEMLITKVQALRA------- 550
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
G+QIVGMSAT+ N+ VA ++ A +Y +FRPV L+EY+K G A
Sbjct: 551 ----------------GIQIVGMSATIGNLNEVARFMLADVYCRDFRPVELQEYVKCGEA 594
Query: 743 IYSKKMDVVRTILTAANLGGK----------------DPDHIVELCDEVVQEGHSVLIFC 786
+Y + + + G+ DPD IV L +V+ G S L+FC
Sbjct: 595 LYEVRGQQGHGARASEQVFGEKRSLRFEDYSDELRRIDPDGIVGLILQVIPNG-SCLVFC 653
Query: 787 SSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGV 846
+++ CE+ + ++K L ++ H ++ + I S + + P+L ++ GV
Sbjct: 654 PTKRMCENLSAMLAKHLPP-ALAEHRAEEKAKLIKSLAE-----DGSVAPILPQSFRVGV 707
Query: 847 AYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR 906
AYHHAGLT +ER +E +R G++ ++ TSTLAAGVNLPA+RVI R P IG F+ +R
Sbjct: 708 AYHHAGLTQDERRTIEDAFRAGVLSLIVCTSTLAAGVNLPAQRVIIRSPYIGTSFLTLSR 767
Query: 907 YRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLH----SCLSEDKNGMTHA 962
Y+QM GRAGR G KG+S+L+C ++ ++ +L C P+ S + +D+
Sbjct: 768 YKQMVGRAGRAGFGEKGDSILVCAQRDIPQVCEML---CSPMDLAESSLMEDDRVQFKSL 824
Query: 963 ILEVVAGGIVQTAEDIHRYVRCTLLN 988
+L + GI T + + TLL+
Sbjct: 825 LLSAIGLGICGTRDALQTLASSTLLS 850
Score = 53.9 bits (128), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 1155 RFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLG-WYDLEG 1213
RF L++ L ++T V EV + + V G +Q L + A V CE + + +
Sbjct: 1051 RFVRVLVVHELWRQTSVQEVAQRYHVNAGSLQTLMNSTAGTAYSVLRMCEEVPELWAFKH 1110
Query: 1214 LIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
L+ R++ + E++ L +P VK RA+ LY+AG T +IA A E+V+++
Sbjct: 1111 LLTGIIERLTHCCKQELMPLMELPSVKLGRAKQLYRAGFTTLASIARAKSKELVESI 1167
>gi|170056636|ref|XP_001864119.1| DNA polymerase theta [Culex quinquefasciatus]
gi|167876216|gb|EDS39599.1| DNA polymerase theta [Culex quinquefasciatus]
Length = 482
Score = 301 bits (770), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 227/372 (61%), Gaps = 28/372 (7%)
Query: 593 LLEPLGRHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELH 652
+L P G V ++G VAVCTIEKANS+VNR+LE+ +LS +G++V+DE+H
Sbjct: 37 ILSPAGIRVEGFFGGHTPPGGFDSVDVAVCTIEKANSIVNRLLEQQKLSSVGLVVVDEVH 96
Query: 653 MVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNV 712
+++D +RGY+LELLLTK+R+ GE +D + +QIV MSAT+PN+
Sbjct: 97 LISDPSRGYILELLLTKIRFV-GERLADETR----------------IQIVAMSATLPNM 139
Query: 713 AAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLG--GKDPDHIVE 770
+ DWL A + T+FRP+ L E +K+GN I+ ++ ++R L G G+D D + +
Sbjct: 140 GLLVDWLGAEQFRTDFRPIELREMVKMGNCIFDREKKLLRK-LEVGEFGEVGRDQDQVAQ 198
Query: 771 LCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDIT-------SA 823
LC E + EG SV++FC S+ CE A H+ +F+ K S+ V E + + A
Sbjct: 199 LCLETILEGCSVIVFCPSKDWCEKLALHLGEFIYK-SLKVKGELGEKMRLQMDPGKMEQA 257
Query: 824 IDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGV 883
+ L+ P GLDPVL +T G YHHAGLT +ER+++E+C+R+G +RV+ ATSTL++GV
Sbjct: 258 LARLKNSPVGLDPVLGKTARYGCVYHHAGLTADERDIIESCFREGTLRVIVATSTLSSGV 317
Query: 884 NLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNE 943
NLPARRVI R P G ++ YRQM GRAGR G D GES+L+C + + L+
Sbjct: 318 NLPARRVIIRTPMFGGAPMNALTYRQMIGRAGRKGRDVLGESILMCDGQNARAGWELVRA 377
Query: 944 SCPPLHSCLSED 955
P+ SCL D
Sbjct: 378 ELKPIASCLDGD 389
>gi|308811917|ref|XP_003083266.1| Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily (ISS)
[Ostreococcus tauri]
gi|116055145|emb|CAL57541.1| Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily (ISS)
[Ostreococcus tauri]
Length = 1038
Score = 300 bits (767), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 276/916 (30%), Positives = 424/916 (46%), Gaps = 128/916 (13%)
Query: 459 LDISSQGIDSITSDSPTNVIK----KPVGNEKSDEAGTPSSSGMLKDCLDLSSWLPSEI- 513
+D+ + G+D T + ++ V S P G + C+ LS+ L S
Sbjct: 178 IDVGTNGVDDKTKKAGYRLVGDVDYAEVRKVASAITPVPGGVGPMTICMLLSNTLDSGAP 237
Query: 514 CSIYKKRGISKLYPWQ----------VECLHVDGVLQRRNLVYCASTSAGKSFVAEILML 563
++ +R + +P + +ECL R+LVY A T AGKS VA+ L+
Sbjct: 238 FALASRRRPVRAFPTRFNFNHSFNRLLECLS-RVARTSRSLVYTAPTGAGKSRVADALLE 296
Query: 564 RRLISTGK-MALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQG-GGSLPKDTSVAV 621
L S G AL+VLPYV++ E+A L L G VR+Y G + G +L D AV
Sbjct: 297 ETLASDGGGRALVVLPYVALVRERAMALAKTLRARGIGVRAYAGGESEGWALGGDARCAV 356
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS 681
TIEKA + V+R LE G E+ I+V+DELHMV++ RG +LE +L ++R+A
Sbjct: 357 TTIEKAANAVSRALERGSFDELRIVVVDELHMVSEDERGGVLEGMLARIRHA-------- 408
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATM--PNVAAVADWLQAALYETNFRPVPLEEYIKV 739
T SG+A G +IV MSAT+ ++ +A WL A Y +RPV L E++
Sbjct: 409 -------TRSGRARRG-GPRIVCMSATVNARSLERLAKWLDAETYVGTYRPVELREHVVR 460
Query: 740 GNAIYSKKMDVVRTILTAANLGGKDPDH----IVELCDEVVQEGHSVLIFCSSRKGCEST 795
+ ++ K + + + A GG + + + EL EV GHS L+FC+S+ C +
Sbjct: 461 EDGVFVKTGEGLTRVRDAPRAGGSERERELGVVAELVGEVFVHGHSTLVFCASKAQCSNV 520
Query: 796 ARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTV 855
A+ ++ + + S F++ DA C D L + + SG+A+HHAGLT
Sbjct: 521 AKRLAGIFHRHPAAM-SLRERFVE--RLFDA---CEGAPDVDLVQAILSGIAWHHAGLTT 574
Query: 856 EEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTR------YRQ 909
E+ V+E +R G + LT T+TLAAGVNLP RR I I +I GTR Y+Q
Sbjct: 575 AEKNVIEEGFRDGAILALTCTTTLAAGVNLPTRRTI-----IIPGYIAGTRTPSMAQYKQ 629
Query: 910 MAGRAGRTGIDTKGESMLIC-KPEEVKKIMGLLNESCPPLHSCLSEDKNG--------MT 960
MAGRAGR G GES LI K + V L+ PPL S L G
Sbjct: 630 MAGRAGRKGQSDVGESFLIVMKKDAVAWAQNLVCGDLPPLESRLFPPSRGRDAPPTAEQK 689
Query: 961 HAILEVVAGGIVQTAEDIHRYV-RCTLLNSTKPFQDVVKSAQDSLRWLCHRKFL---EWN 1016
LE +A GI++T ED R S + ++ + SL+ + +
Sbjct: 690 KFYLESIACGILKTKEDAGELACRTFAWTSEDDYSSILLRQEVSLKQIHDEGVVMVRRTG 749
Query: 1017 EDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRA-REGFVLASDLHLV---------YL 1066
E++ + +TP G A + SL + + +L A R G L S HL+ +L
Sbjct: 750 ENSTEWCSTPEGFAFYRCSLPIAHAKKLRSELDDALRNGLNLTSRTHLLFFCISNESNFL 809
Query: 1067 STPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTK 1126
+ +N V DW L ++ S L Q +GV+ Y H
Sbjct: 810 ANNLNWHVWSDW-LEHD-----SVLHQLGEKHLGVTREY---AEHA-------------- 846
Query: 1127 GLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLV-QETPVLEVCETFK------ 1179
+YRLG+++ + ++ +R A +LS L+ + + ++ + +
Sbjct: 847 ------QYRLGVSAESRAVRSRH----ERLAAAHLLSELLANDDTIFDIEQKWSLMSNGA 896
Query: 1180 VARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYV 1239
+ RG +Q+LQ A A M SV GW L GL+ + G R E++ L + +
Sbjct: 897 IDRGKIQSLQNMAATTAGMASVLANECGWSALAGLMLNVSEELQAGARRELLPLMRLDGM 956
Query: 1240 KGSRARALYKAGLRTPLAIAEASISEI-------VKALFESS-SWIAEAQRRVQLGVAKK 1291
G+RAR+LY AG +TP IA + ++ +K+L SS + + +A R VA
Sbjct: 957 TGARARSLYNAGFKTPTIIASLATEKLDKLVEACLKSLSRSSRAGLDQAMRTTAWRVATS 1016
Query: 1292 IKNGARKIVLEKAEEA 1307
+ AR++ + +A A
Sbjct: 1017 LAKNAREVSVMEARAA 1032
>gi|170049318|ref|XP_001855268.1| DNA polymerase theta [Culex quinquefasciatus]
gi|167871133|gb|EDS34516.1| DNA polymerase theta [Culex quinquefasciatus]
Length = 1224
Score = 295 bits (755), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 273/500 (54%), Gaps = 71/500 (14%)
Query: 509 LPSEICS-IYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLI 567
LP+++ I K RGI +LY WQ ECL + +++R NL+Y TS GK+ VAEI+MLR ++
Sbjct: 425 LPTQVKRLIAKYRGIEELYDWQKECLGLTAIVERHNLIYALPTSGGKTLVAEIIMLREVM 484
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPK-----DTSVAVC 622
+ + ++PYVSI EK L L V Y G G G++P S+ VC
Sbjct: 485 LRNRNVMFIVPYVSIAQEKLAALAPFAVDLAFLVEEYSG--GKGAIPPRKRKHKNSIFVC 542
Query: 623 TIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSS 682
TIEKA L++ ++E R +E+G+IVIDELHM+ + RG LE+LLTK++
Sbjct: 543 TIEKALVLMDGLIEVDRANEVGLIVIDELHMIGEDRRGVHLEVLLTKVKAIQA------- 595
Query: 683 SGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNA 742
G+Q+VGMSAT+ N+ +A +++A +Y +FRPV L+EY+K G
Sbjct: 596 ----------------GIQVVGMSATIGNLDEIARFMEADIYCRDFRPVELQEYVKCGMD 639
Query: 743 IY-----SKKMDVVRTILTAANLGGK------DPDHIVELCDEVVQEGHSVLIFCSSRKG 791
++ ++ ++ + G DPDH++ L +V+ S L+FC +++
Sbjct: 640 LFEINTKARTLEEAFKTKKEVDFGYTEEQRRVDPDHVIALVTDVI-PTKSCLVFCPTKRQ 698
Query: 792 CESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHA 851
CE ++ L + + +H + +L G+AYHH+
Sbjct: 699 CEQLCTLMTDCLPR-ELLLHRTKEH--------------------LLASAFLLGIAYHHS 737
Query: 852 GLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMA 911
GL+ +ER+++E YR G++ ++ TSTLAAGVNLPA+RVI R P I +F +RY+QMA
Sbjct: 738 GLSFDERKMIEDAYRLGILSLIICTSTLAAGVNLPAKRVIIRSPFIATNFTTLSRYKQMA 797
Query: 912 GRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLH----SCLSEDKNGMTHAILEVV 967
GRAGR G+ GES+LIC+ +++ + LL C P+ S +++ N + + IL +
Sbjct: 798 GRAGRAGLGEPGESILICQKKDIGAVCNLL---CSPMDDANSSLHTDNGNYLKNLILSSI 854
Query: 968 AGGIVQTAEDIHRYVRCTLL 987
G+ T D+ +++ TLL
Sbjct: 855 GLGLCSTRNDVQKFMAKTLL 874
Score = 51.2 bits (121), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 1155 RFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEG 1213
RF+ I+S L P V +K+ G VQ L N AS + E+L +
Sbjct: 1070 RFFRMTIVSELWDLVPPQRVARKYKLDAGSVQQLMTNVASTASGLLRMTEQLPKLWAYRQ 1129
Query: 1214 LIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIV 1267
L+A R+S E++ L +P VK +RA+ L++AG + +IA A S++V
Sbjct: 1130 LLATMTQRLSHCCTIELLPLMELPGVKIARAKQLWRAGFTSLASIAAAKSSDLV 1183
>gi|384249601|gb|EIE23082.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Coccomyxa subellipsoidea C-169]
Length = 398
Score = 294 bits (752), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 186/429 (43%), Positives = 237/429 (55%), Gaps = 56/429 (13%)
Query: 525 LYPWQVECLH--VDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGK----------M 572
+YPWQ L VDG NLVYCA TS GKS VAE+LMLRRL++T K
Sbjct: 1 MYPWQAAALECGVDG----SNLVYCAPTSGGKSLVAEVLMLRRLLATRKPGARFTRNKQF 56
Query: 573 ALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGS--LPKDTSVAVCTIEKANSL 630
AL VLPY+S+ AEK +L G + +YGN G+ P +AVCTIEKAN
Sbjct: 57 ALFVLPYISVVAEKTADFTDILRSTGCKCKGFYGNSENGTPLQPGSEPIAVCTIEKANVA 116
Query: 631 VNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTS 690
+NR++ E RL E+ +V+DE+HM+ DQ+RG LEL +TK+ ++
Sbjct: 117 INRLVMEDRLDELCCVVVDEVHMLNDQHRGPSLELAITKILHS----------------- 159
Query: 691 SGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKM-- 748
K PA +QIVGMSATM V A++ WL L+ TNFRPV L EY ++SK
Sbjct: 160 --KHAPA--IQIVGMSATMGGVDALSKWLSCRLFLTNFRPVSLTEYAVFQGNVFSKGKAG 215
Query: 749 -DVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFS 807
D + + A+ +D D ++ L EVV E SVL+FC+SRK C+S A ++ L
Sbjct: 216 EDELVPVRQLADSDARDRDLLLPLAAEVVAEAGSVLVFCASRKQCQSCAEMLANLLPSHI 275
Query: 808 INVHSSDSEFIDITSAIDALRRCPAGL-DPVLEETLPSGVAYHHAGLTVEEREVVETCYR 866
+ E A+R G D LE + +GVA+HHAGLT+EER VE YR
Sbjct: 276 PAIAEVQDELAQ------AMRGAMGGYADATLERLMRAGVAWHHAGLTLEERAHVEAGYR 329
Query: 867 KGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRD-FIDG------TRYRQMAGRAGRTGI 919
G +RVL ATSTLAAG+NLPARRVI R R FI G +Y QM GRAGR G
Sbjct: 330 AGTIRVLCATSTLAAGINLPARRVILRSLWQARSPFISGPGPVSRAQYLQMVGRAGRAGY 389
Query: 920 DTKGESMLI 928
GES +I
Sbjct: 390 AEAGESYII 398
>gi|403302150|ref|XP_003941726.1| PREDICTED: DNA polymerase theta-like [Saimiri boliviensis
boliviensis]
Length = 475
Score = 293 bits (749), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 234/392 (59%), Gaps = 37/392 (9%)
Query: 483 GNEKSDEAG--TPSSSGMLKDCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVL 539
G + + AG P++ D L L +W LP + Y G+ K++ WQ ECL + VL
Sbjct: 99 GRQSAATAGECKPTAPDCQIDKLLLVNWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVL 158
Query: 540 QRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGR 599
+ +NLVY A TSAGK+ VAE+L+L+R++ K AL +LP+VS+ EK +L+ L + +G
Sbjct: 159 EGKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGI 218
Query: 600 HVRSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNR 659
V SY G VAVCTIE+AN L++R++EE ++ +G++V+DELHM+ D +R
Sbjct: 219 KVDSYMGRICPARHFSSLDVAVCTIERANGLISRLIEENKMDLLGMVVVDELHMLGDSHR 278
Query: 660 GYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGL----QIVGMSATMPNVAAV 715
GYLLELLLTK+ T+S +AD A L QIVGMSAT+PN+ V
Sbjct: 279 GYLLELLLTKI------------CCITRKTASSQADLASSLSNAVQIVGMSATLPNLELV 326
Query: 716 ADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEV 775
A WL A LY T+F PVPL E +KVGN+IYS M VR + G D D++V LC E
Sbjct: 327 ASWLNAELYHTDFCPVPLLESVKVGNSIYSSSMKFVREFEPMLPVKG-DEDYVVSLCYET 385
Query: 776 VQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSS------DSEFI-------DITS 822
+++ HSVL+FC S+K CE A +++ N+H SEF D+
Sbjct: 386 IRDNHSVLLFCPSKKWCEKLADIIAREF----YNLHHQAEGLVISSEFPPVIQEQKDLLE 441
Query: 823 AIDALRRCPAGLDPVLEETLPSGVAYHHAGLT 854
+D LRR P+GLD VL++T+P GVA+HHAG++
Sbjct: 442 VMDQLRRLPSGLDSVLQKTVPWGVAFHHAGIS 473
>gi|344255335|gb|EGW11439.1| Helicase POLQ-like [Cricetulus griseus]
Length = 940
Score = 291 bits (744), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 189/513 (36%), Positives = 277/513 (53%), Gaps = 78/513 (15%)
Query: 594 LEPLGRHVRSYYGNQGGGSLPK---DTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDE 650
L LG V Y G++G K S+ + TIEK +SLVN ++E GR+S +G++V+DE
Sbjct: 380 LYELGFFVEEYAGSKGRFPPTKRREKKSLYIATIEKGHSLVNALIETGRISTLGLVVVDE 439
Query: 651 LHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMP 710
LHM+ + +RG +LE+ L K+ Y TS ++ QI+GMSAT+
Sbjct: 440 LHMIGEGSRGAILEMTLAKVLY-----TSKTT------------------QIIGMSATLN 476
Query: 711 NVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGK------- 763
NV + ++L+A Y + FRPV L+EY+KV + IY + + L K
Sbjct: 477 NVEDLQEFLKAEYYTSQFRPVELKEYLKVNDTIYEVDSRAANGMTFSRLLNYKYSDALRK 536
Query: 764 -DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFIDITS 822
DPDH+V L EV+ +S L+FC S+K CE+ A + KFL K +N H + + +
Sbjct: 537 MDPDHLVALVTEVI-PNYSCLVFCPSKKNCENVAEMLCKFLSKDYLN-HRDEEK----SE 590
Query: 823 AIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAA 881
I LR G + PVL+ T+P GVAYHH+GLT +ER ++E Y G++ + T TSTLAA
Sbjct: 591 VIKNLRNVGNGKVCPVLKRTIPFGVAYHHSGLTTDERRLLEEAYSTGVLCLFTCTSTLAA 650
Query: 882 GVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLL 941
GVNLPARRVI R P + R+F+ +Y+QM GRAGR GIDT GES+L+ + ++ ++I L
Sbjct: 651 GVNLPARRVILRAPYVAREFLRRNQYKQMIGRAGRAGIDTVGESILVLQEKDKQQIATSL 710
Query: 942 NESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQ 1001
+ I + + G + I LL ++ V
Sbjct: 711 GD-------------------IYQFMNGTFFGVQQKI-------LLKEKSLWEITV---- 740
Query: 1002 DSLRWLCHRKFL--EWNEDTKL---YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFV 1056
DSL +L + L E DT+L + T LG+A+F ++ + DL + EG V
Sbjct: 741 DSLSYLTEKGLLQKESRGDTELESHFRVTKLGQASFKGAIDLAYCDTLYRDLKKGLEGLV 800
Query: 1057 LASDLHLVYLSTPINV--EVEPDWELYYERFLE 1087
L S LHLVYL+TP ++ + EPDW +Y+ + LE
Sbjct: 801 LESLLHLVYLTTPYDLVAQTEPDWMVYFRQELE 833
>gi|307106799|gb|EFN55044.1| hypothetical protein CHLNCDRAFT_134899 [Chlorella variabilis]
Length = 1781
Score = 290 bits (742), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 263/878 (29%), Positives = 393/878 (44%), Gaps = 162/878 (18%)
Query: 505 LSSWLPSEICSIYKKR-GISKLYPWQVECLHVDGVLQR-RNLVY---------------- 546
L +LP ++ ++ G++ LY WQ ECL++ GV++ NLVY
Sbjct: 238 LEDYLPDDVAHAMREACGMTDLYAWQAECLNLPGVIEHGTNLVYQATYAHATFGLPRKPE 297
Query: 547 ----CASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVR 602
A T +GKS VA LMLR L K L+ V+
Sbjct: 298 FVCRAAPTGSGKSIVAWTLMLRALARHKKRKALL------------------------VK 333
Query: 603 SYYGNQ-GGGSLPKDTSVAVCTIEKANSLVNRMLEEG--RLSEIGIIVIDELHMVADQNR 659
+YG + L T V VCT E ANSL+NR+ + G E +V+DE HM+ D +R
Sbjct: 334 CFYGARYDAAPLGHSTGVLVCTCESANSLLNRLQDSGVDPTGEFSCVVLDEAHMLQDSHR 393
Query: 660 GYLLELLLTKLRYAA-------------GEGTSDSSSGENSGTSSGKADPAHGLQIVGMS 706
G E+LL KLRY + D +S EN+ S PA LQIV MS
Sbjct: 394 GAQYEMLLAKLRYKQRTAEEEPQKEMRQQQEDGDDASCENARGSQALLPPAQRLQIVCMS 453
Query: 707 ATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPD 766
AT+P + A L A Y T+FRP+ L ++ DP
Sbjct: 454 ATLPGPGSFAKCLGARCYITDFRPIALNHFL--------------------------DPL 487
Query: 767 HIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFL----KKFSINVHSSDSEFIDITS 822
I LC E V E VL+FC+++ AR + L ++ S S E
Sbjct: 488 CIATLCQEAVDERRKVLVFCATKALAVQEARRLKTLLHAPEQRSSAAAGESSRERRTRAH 547
Query: 823 AIDALRRCPAGLDP---VLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTL 879
LR A DP L E + G AY H+ + + +V YR+G V VL T+TL
Sbjct: 548 YAAQLR---ALGDPDSLALAELVEGGAAYDHSKVPGTAKALVADAYREGAVAVLCTTTTL 604
Query: 880 AAGVNLPARRVIFRQPRIGR--DFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKI 937
++ VNLPA RV+FRQ + +++ +Y QMAGRAGR G++ GE+ L+ P E
Sbjct: 605 SSSVNLPAFRVVFRQAWVATKGNWLTPQQYHQMAGRAGRKGLEEVGEAFLVLNPREPPPR 664
Query: 938 MGLLN--------ESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYV-RCTL-L 987
LL+ L ++ +G+ A+LE VAG +T ED+ RY+ RCT+
Sbjct: 665 QHLLSLISSDVAQAVASRLEPEVAGTPSGLRGAMLEAVAGCGARTKEDVFRYLHRCTIAA 724
Query: 988 NSTKPFQDVVKSAQDSLRWLC------HRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEES 1041
S + + + ++A+D+L WL +E+++D Y TPLGRA S+L EE+
Sbjct: 725 ASARDMEALQQAAKDALAWLGKPDGQKELAMIEYSKDAHQYQPTPLGRAVVASALPMEEA 784
Query: 1042 LIVLDDLSRAREGFVLASDLHLVYLSTP---INVEVEPDWELYYERFLELSALD---QSV 1095
L++ D+ R L DL L YLS P + W++ + E S + +++
Sbjct: 785 LVIRADMLRLSRRLSLLCDLQLCYLSVPPFHTQQMLPQHWKVLSKAVQEASQDELVWEAL 844
Query: 1096 GNQVGVSEP-----YLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTL 1150
G +G+S+ YL R A +S K R + +SD + +
Sbjct: 845 GG-IGISQDSAAMGYLHRRCRQANAAVSGKGRPYMP---------------DPISDERDM 888
Query: 1151 -RVCKRFYVALILSRLV-QETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERLGW 1208
R+C R Y AL L L+ E +V + F++ + L+ + F+ + F RLGW
Sbjct: 889 ERLCSRLYTALALQALIADEADEGQVQDQFQLDN--FRELRLHCSHFSGKAAAFASRLGW 946
Query: 1209 YDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVK 1268
+ + +G + E+ LT + V + AR L+ +GL T A+AEA + +IV+
Sbjct: 947 TYMAA------RHIKYGSKLEVSSLTELSGVDVATARLLFNSGLCTLEAVAEARLEDIVE 1000
Query: 1269 ALFES------SSWIAEAQRRVQLGVAKKIKNGARKIV 1300
AL + S+ AQRR + A+ IK A + V
Sbjct: 1001 ALSHTKAHRNRSTEQEAAQRRQK---ARSIKTAAAERV 1035
Score = 99.8 bits (247), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 139/329 (42%), Gaps = 37/329 (11%)
Query: 1706 NGCCRRVAQTRALCSVLWKL-LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQA 1764
+ CC A A V +L ++ + LL E+PL VLA ME G+G+D +
Sbjct: 1455 DACCTAAASRAAWEEVQPQLQAINGSTMAVLLEQEMPLAVVLAGMEAVGVGIDTQHLQSL 1514
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLK-----LPIPEGHNKGKQHPS 1819
R+ L+++ + +E + G + L ++++VL+G L+ P P + S
Sbjct: 1515 RSQLEQRRKDIELEIARALGRRLDLSKFKEVSDVLFGKLEGQLGLQPPPCAKKLKRGGYS 1574
Query: 1820 TDKHCLDLLRHEHP----IVPVIKEHRTLA-------KLLNCT------------LGSIC 1856
+K + L +P +V +I EHR LA +LL C
Sbjct: 1575 ANKEVMQALVRLNPDCPPVVKLIAEHRRLAYSVWFIRQLLQCARAGAALAQQLEPAAGAA 1634
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM------SNEDIYGG 1910
L R + +T+ H + T G + + CV E +M D
Sbjct: 1635 PLGRAGGGPRIWTVL-HQTNSDTGAGAVLLGLLRRCCVPRTHELRMLLKGTAREGDDVSA 1693
Query: 1911 NAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
+ + + N R F+ + +LL ADY IELR+MAHFS+D L+ D F +
Sbjct: 1694 SGQHRLLEANVRKAFV-AAPGCVLLGADYRAIELRMMAHFSQDEKLLATFQDGQHDPFRL 1752
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGIL 1999
+AA+W G+ V +R K L YGI+
Sbjct: 1753 LAAKWLGKELGQVSQTDRQLIKHLQYGIM 1781
>gi|432114606|gb|ELK36447.1| DNA polymerase theta [Myotis davidii]
Length = 2190
Score = 288 bits (737), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 251/459 (54%), Gaps = 55/459 (11%)
Query: 842 LPSGVAYHHA---------GLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIF 892
LP+ VA + GLT EER+++E +R+G +RVL ATSTL++GVNLPARRVI
Sbjct: 14 LPTTVAANQGEPVPTVEWGGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVII 73
Query: 893 RQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL 952
R P +D Y+QM GRAGR G+DT GES+LICK E K + LL S P+ SCL
Sbjct: 74 RTPIFSGRTLDVLTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCL 133
Query: 953 -----SEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNST--------KPFQDVVK- 998
E M AILE++ GG+ T++D+ Y CT L ++ + QD V+
Sbjct: 134 RRREGEEVTPSMIRAILEIIVGGVASTSQDMQTYASCTFLAASMREGKRGIQKNQDPVQL 193
Query: 999 -SAQDSLRWLCHRKFLEWNE-----DTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAR 1052
+ + + WL +F++ E + K+Y T LG A SSL P ++L + DL RA
Sbjct: 194 GAIESCVMWLLENEFIQTTEASDGTEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAM 253
Query: 1053 EGFVLASDLHLVYLSTPINVE-VEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAH 1111
+GFVL +DLH+VYL TP+ + DW + + +L + V VGV E +L R
Sbjct: 254 KGFVLENDLHIVYLVTPMFEDWTTIDWYRFLCLWEKLPTSMKRVAELVGVEEGFLARCVK 313
Query: 1112 GAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPV 1171
G K+ T+ H + + + KRF+ +L+L L+ E P+
Sbjct: 314 G-------KVVARTERQH------------------RQMAIHKRFFTSLVLLDLISEVPL 348
Query: 1172 LEVCETFKVARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIV 1231
E+ + RG VQ+LQ++A +A M++VF RLGW+++E L+++FQ R++FG++ E+
Sbjct: 349 KEINRKYGCNRGQVQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELC 408
Query: 1232 ELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKAL 1270
+L + + RAR LY +G T +A A+I E+ L
Sbjct: 409 DLIRVSLLNAQRARFLYASGFLTVADLARANIPEVETVL 447
Score = 253 bits (645), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 262/534 (49%), Gaps = 80/534 (14%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L +AL +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 1659 LNSLLKKENLHDALCKVEMPCQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQ 1718
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEG--HNKGKQHP--------------------S 1819
LAG FS + DIA VL+ LKLP P G +N+G + S
Sbjct: 1719 LAGHSFSFTSTDDIAEVLFLELKLP-PNGEINNQGSKKTLGATRRGNDNGRKLKLGKRFS 1777
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTST 1879
T K L+ L+ HP+ +I E R + + + + R++ ++ Q+ T
Sbjct: 1778 TSKDVLNKLKALHPLPNLILEWRRITNAITKVVFPLQRERRLNPFLGMDRIYP-ISQSHT 1836
Query: 1880 ATGRLSMEEPNLQCVEHMVEFKMSN-----------------------------EDIYGG 1910
ATGR++ EPN+Q V E +M ++
Sbjct: 1837 ATGRITFTEPNIQSVPRDFEIQMPTLVGESPPSQALGRGLLPMSRRGTKKGCGLNSVHQA 1896
Query: 1911 NAEVDHC------KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
E ++ R F+P ++LAADYSQ+ELR++AH S D LI +L+
Sbjct: 1897 QTEERSSDRGMPFSVSMRHAFVPFPGGGVILAADYSQLELRVLAHLSHDNRLIQVLNT-G 1955
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
DVF IAA W +SVG R Q K++ YGI+YGMG +L EQ+ N+A I S
Sbjct: 1956 ADVFRSIAAEWKMTEPESVGEDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDS 2015
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
FKS + G+ ++ V +C + G+V+++ GR+R+L IK N K+ A+RQA+N+ QG
Sbjct: 2016 FKSRYTGINHFMKETVKNCKRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTTVQG 2075
Query: 2085 SAADIIKIAMINIHSII--VGGVYK-----------------PDSSLAANFQMLKGRCRL 2125
SAADI+KIA +NI + ++K P L F+ ++G
Sbjct: 2076 SAADIVKIATVNIQKQLETFQSIFKSHGHREVMLQGDRTGLLPKRKLQGMFRPIRGGF-F 2134
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+LQ+HDEL+ EV + + +V+ ME+A L V L VK+++G++WG L+ F
Sbjct: 2135 ILQLHDELLYEVAEEDVFQVAQIVKNEMENALKLSVKLKVKVKIGASWGELKDF 2188
>gi|241237976|ref|XP_002401231.1| DNA polymerase theta, putative [Ixodes scapularis]
gi|215496132|gb|EEC05773.1| DNA polymerase theta, putative [Ixodes scapularis]
Length = 750
Score = 282 bits (721), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 204/585 (34%), Positives = 299/585 (51%), Gaps = 56/585 (9%)
Query: 528 WQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGKMALLVLPYVSICAEKA 587
WQ ECL + RR+LVY TS GK+ VAE+L L+ L+ + L VLPYVS+ EK
Sbjct: 13 WQKECLQLAQRSGRRHLVYSLPTSGGKTLVAEVLSLQELLLASRSVLFVLPYVSLVQEKV 72
Query: 588 EHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEKANSLVNRMLEEGRLSE 642
L L LG V Y G +G +LP + +V V TIEKA+ LV+ + E GRLSE
Sbjct: 73 RDLSPLAVDLGFLVEEYAGARG--ALPPVRRRQRCAVYVATIEKAHFLVDALTELGRLSE 130
Query: 643 IGIIVIDELHMVAD-QNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGLQ 701
+G++V+DELHM+ D +RG LE L K++ +G +
Sbjct: 131 LGLLVVDELHMLGDGSSRGATLESTLVKVKRVSGST-----------------------R 167
Query: 702 IVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYI--------KVGNAIYSKKMDVVRT 753
IVGMSAT+ N+ + +L A ++ +FRPV L + G A K +
Sbjct: 168 IVGMSATLGNMEDLTTFLGADVFVGSFRPVLLASWTGRRRFCSTTAGGASGVYKGGQLSR 227
Query: 754 ILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSS 813
+DP+H+ L EVV + H+ LIFC ++K CES A +S+ L + ++ H
Sbjct: 228 GAGGGRGSPEDPEHLSLLVGEVVPQ-HACLIFCPTKKNCESVALLLSRSLPR-ALKEHRG 285
Query: 814 DSEFIDITSAIDALR-RCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRV 872
+ S + ALR C L VL T+P GVAYHH+GLT+EER ++E Y G++
Sbjct: 286 PEK----ESLLKALRAECGGRLCRVLRHTVPLGVAYHHSGLTLEERRLLEEAYSSGVLCC 341
Query: 873 LTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPE 932
L TSTLAAGVNLPA+RV+ R P G +F+ +RY+QM GRAGR G+D+ GES+LI P
Sbjct: 342 LACTSTLAAGVNLPAKRVVVRSPYTGTEFLTRSRYQQMCGRAGRAGLDSSGESILIVPPG 401
Query: 933 EVKKIMGLLNESCPPLHSCLSE--DKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNST 990
+ K++ LL P+ +C S N + +L V+ G+ T + + +LL +
Sbjct: 402 QKDKVLSLLRA---PMETCRSSLLQDNRLDMLLLSVIGLGVASTEAAVAEVLDSSLL-AL 457
Query: 991 KPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSR 1050
+ Q+ Q L + L + + +T+ LGRAAF + P + + +L
Sbjct: 458 QLRQEGTDVGQVLAESLGRLRALGLLKGGSVLATSSLGRAAFKGCVDPARAQHLHAELWS 517
Query: 1051 AREGFVLASDLHLVYLSTPINVEVEPDWEL----YYERFLELSAL 1091
+ E L +HL+++ P + P + YY L L
Sbjct: 518 SLEALSLRCHIHLLHVVAPRGMGAPPQLRIEPSQYYRHVRPLCTL 562
>gi|343959970|dbj|BAK63842.1| DNA helicase HEL308 [Pan troglodytes]
Length = 557
Score = 278 bits (711), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 292/566 (51%), Gaps = 68/566 (12%)
Query: 759 NLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHSSDSEFI 818
L DPDH+V L EV+ +S L+FC S+K CE+ A + KFL K + +
Sbjct: 14 TLKKMDPDHLVALVTEVI-PNYSCLVFCPSKKNCENVAEMICKFLSKEYLKHKEKEK--- 69
Query: 819 DITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATS 877
I L+ G L PVL+ T+P GVAYHH+GLT +ER+++E Y ++ + T TS
Sbjct: 70 --CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTRVLCLFTCTS 127
Query: 878 TLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKI 937
TLAAGVNLPARRVI R P + ++F+ +Y+QM GRAGR GIDT GES+LI + ++ +++
Sbjct: 128 TLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQEKDKQQV 187
Query: 938 MGLLNESCPPLHSCLS----EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPF 993
+ L+ + PL +C S E G+ L ++ I +DI+ ++ T +
Sbjct: 188 LELITK---PLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKV 244
Query: 994 QDVVKS----AQDSLRWLCHRKFLEWNEDTKL-------YSTTPLGRAAFGSSLCPEESL 1042
KS +SLR+L + L+ + K + T LGRA+F ++
Sbjct: 245 LLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCD 304
Query: 1043 IVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLELSALDQSVGNQVG 1100
I+ DL + EG VL S LHL+YL+TP ++ + PDW +Y+ +F +LS +Q+V +G
Sbjct: 305 ILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDWMIYFRQFSQLSPAEQNVAAILG 364
Query: 1101 VSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVAL 1160
VSE ++ + A G I K+ V R Y++
Sbjct: 365 VSESFIGKKASGQA--IGKKVDKD---------------------------VVNRLYLSF 395
Query: 1161 ILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQ 1219
+L L++ET + V E F + RG +Q L F+S V FCE L ++ L+ +
Sbjct: 396 VLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHFCEELEEFWVYRALLVELT 455
Query: 1220 NRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAE 1279
++++ V+AE++ L + V RA+ LY AG ++ + +A A+ +V+ I
Sbjct: 456 KKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANANPEVLVRT-------IDH 508
Query: 1280 AQRRVQLGVAKKIKNGARKIVLEKAE 1305
RR AK+I + A+ ++ E+AE
Sbjct: 509 LSRR----QAKQIVSSAKMLLHERAE 530
>gi|393906987|gb|EJD74472.1| type III restriction enzyme [Loa loa]
Length = 516
Score = 278 bits (711), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 257/454 (56%), Gaps = 45/454 (9%)
Query: 513 ICSIYKK-RGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLISTGK 571
IC +Y+ R IS Y WQ +CL+ + ++ N++ T AGK+ VAEI+MLR I +
Sbjct: 70 ICEMYRNLRNISSFYDWQNQCLNDEHLISGTNMIISMGTGAGKTLVAEIVMLRETIFRRR 129
Query: 572 MALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCTIEK 626
+LV+PYV+I EK L V + L V Y ++G LP K S+ V TIEK
Sbjct: 130 SCILVVPYVAIAQEKVYSLSVFEDKLNVCVEEYAASKG--RLPPIKRRKGESIYVATIEK 187
Query: 627 ANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGEN 686
AN L+N ++E R+ EIG++V+DELHM+ + RG ++E L K G G
Sbjct: 188 ANMLINSLIELDRIDEIGVVVVDELHMIGENTRGAIIEQGLIKF-MQKGTG--------- 237
Query: 687 SGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY-- 744
QI+G+SAT+ NV ++ +L AA++ T FRP+ L E +K+ N++Y
Sbjct: 238 --------------QIIGLSATLSNVEQLSKFLSAAVFSTKFRPIKLVEKVKIDNSLYIV 283
Query: 745 --SKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKF 802
K++ L L +DPD +V L ++V + SVLIFC +++ CES + VS
Sbjct: 284 QPEGKLEF-EMCLGENKLRNRDPDGLVPLLRDIVPK-QSVLIFCPTKQNCESVCKAVSHL 341
Query: 803 LKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTVEEREVV 861
+ K NV + + + +A+ AL+ G +LE ++ GVAYHH+GLT +ER+++
Sbjct: 342 MPK---NVR--ERKKTERLAAVKALKSEEDGKFSSLLELSIMRGVAYHHSGLTADERKII 396
Query: 862 ETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDT 921
E ++ G++ ++ TSTLAAGVNLPARRVI + P +G++ I +Y QM GRAGR G D
Sbjct: 397 EGAFQDGIINIICCTSTLAAGVNLPARRVIIKAPLVGKEPIRKAQYLQMIGRAGRAGYDD 456
Query: 922 KGESMLICKP-EEVKKIMGLLNESCPPLHSCLSE 954
GE++ I E K + +++ P +S L+E
Sbjct: 457 IGEAVTIVHSGYEESKFLDMISGPLPECNSSLNE 490
>gi|313221958|emb|CBY38997.1| unnamed protein product [Oikopleura dioica]
Length = 886
Score = 274 bits (701), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 251/455 (55%), Gaps = 35/455 (7%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLIS 568
LP+++ K +G+ LY WQ +CL + V++ NL++ TSAGKS VAE+ +LR L+
Sbjct: 125 LPAQMNQFMKIKGLKNLYKWQEDCLRMKKVIKSANLIFSLPTSAGKSLVAEVHLLRHLLE 184
Query: 569 TGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCT 623
GK LLVLP+VSI EK L + G+ G G +P + ++ + T
Sbjct: 185 -GKNGLLVLPFVSIVQEKVASLSAIASETGQKFVVEEYAAGNGRIPPIKRRQTPALFIAT 243
Query: 624 IEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSS 683
IEKA+ ++N + G I V+DELHM+ + RG LE L K+ +A +G
Sbjct: 244 IEKASQIINCAIN-GEGPWISCCVVDELHMIGEGIRGARLEATLAKIMFATKQGKGSC-- 300
Query: 684 GENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAI 743
QI+GMSAT+PN+ + ++ +A L+ ++FRP+PL +Y+K+ + +
Sbjct: 301 -----------------QIIGMSATLPNLQDLVEFTRAELFTSDFRPIPLTQYLKLSHFV 343
Query: 744 YSKKMDVVRTILTAANLGGK------DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTAR 797
Y + D + ++T + K DPD ++ L EV+ + HSVLIFCSSR+ C+S +
Sbjct: 344 YRVE-DNGKQLMTKFDRQIKPQDQKIDPDGLLPLVLEVIPK-HSVLIFCSSRRNCQSVMK 401
Query: 798 HVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEE 857
++ LK + ++ + I + L G+DP +L G+A+HHAGL+ E
Sbjct: 402 LLASQLKMEMVPDDLANKREMLINDLVQELESV-GGVDPDFLNSLRFGIAFHHAGLSGPE 460
Query: 858 REVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRT 917
R +E +R G + VL TSTLAAGVNLPARRVI R GR + + YRQMAGRAGR
Sbjct: 461 RATIEDGFRDGTLCVLCCTSTLAAGVNLPARRVIIRALTQGRSLLPISTYRQMAGRAGRA 520
Query: 918 GIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL 952
G DT GE+ +I P++ K+ + L+ P S L
Sbjct: 521 GYDTMGEAFIIAPPKDRKRCLELVGGVMNPAESKL 555
>gi|313243930|emb|CBY14815.1| unnamed protein product [Oikopleura dioica]
Length = 603
Score = 272 bits (695), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 250/455 (54%), Gaps = 35/455 (7%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILMLRRLIS 568
LP ++ K +G+ LY WQ +CL + V++ NL++ TSAGKS VAE+ +LR L+
Sbjct: 125 LPVQMNQFMKIKGLKNLYKWQEDCLRMKKVIKSANLIFSLPTSAGKSLVAEVHLLRHLLE 184
Query: 569 TGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KDTSVAVCT 623
GK +LVLP+VSI EK L + G+ G G +P + ++ + T
Sbjct: 185 -GKNGILVLPFVSIVQEKVASLSAIASETGQKFVVEEYAAGNGRIPPIKRRQTPALFIAT 243
Query: 624 IEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSS 683
IEKA+ ++N + G I V+DELHM+ + RG LE L K+ +A +G
Sbjct: 244 IEKASQIINCAIN-GEGPWISCCVVDELHMIGEGIRGARLEATLAKIMFATKQGKGSC-- 300
Query: 684 GENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAI 743
QI+GMSAT+PN+ + ++ +A L+ ++FRP+PL +Y+K+ + +
Sbjct: 301 -----------------QIIGMSATLPNLQDLVEFTRAELFTSDFRPIPLTQYLKLSHFV 343
Query: 744 YSKKMDVVRTILTAANLGGK------DPDHIVELCDEVVQEGHSVLIFCSSRKGCESTAR 797
Y + D + ++T + K DPD ++ L EV+ + HSVLIFCSSR+ C+S +
Sbjct: 344 YRVEDDG-KQLMTKFDRQIKPQDQKIDPDGLLPLVLEVIPK-HSVLIFCSSRRNCQSVMK 401
Query: 798 HVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEE 857
++ LK + ++ + I + L G+DP +L G+A+HHAGL+ E
Sbjct: 402 LLASQLKMEMVPDDLANKREMLINDLVQELESV-GGVDPDFLNSLRFGIAFHHAGLSGPE 460
Query: 858 REVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRT 917
R +E +R G + VL TSTLAAGVNLPARRVI R GR + + YRQMAGRAGR
Sbjct: 461 RATIEDGFRDGTLCVLCCTSTLAAGVNLPARRVIIRALTQGRSLLPISTYRQMAGRAGRA 520
Query: 918 GIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCL 952
G DT GE+ +I P++ K+ + L+ P S L
Sbjct: 521 GYDTMGEAFIIAPPKDRKRCLELVGGVMNPAESKL 555
>gi|312072727|ref|XP_003139197.1| hypothetical protein LOAG_03612 [Loa loa]
gi|307765639|gb|EFO24873.1| hypothetical protein LOAG_03612 [Loa loa]
Length = 412
Score = 270 bits (691), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 239/431 (55%), Gaps = 37/431 (8%)
Query: 503 LDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVL--QRRNLVYCASTSAGKSFVAEI 560
L+ SW+P+EI Y + GI L WQ++ L+ + Q N ++ A TS+GK+ VAE+
Sbjct: 2 LNYPSWVPNEIAVGYIEHGIQALLSWQLDVLNNRSLQAPQYGNFIFSAPTSSGKTVVAEL 61
Query: 561 LMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVA 620
+ + + A+ V PY+S+ EK L+ + + V ++ G+Q D S+
Sbjct: 62 IAVNTVRQLRCKAVFVFPYISVAKEKFLTLQKIWRRVDLRVSAFMGSQTSPFQAWDASI- 120
Query: 621 VCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSD 680
CTIEKANSL+NRM++E + +IG++VIDE HM+ D NRG L+E ++ K+ Y +
Sbjct: 121 -CTIEKANSLLNRMIDEKTIFDIGVLVIDEFHMLFDGNRGPLVEHIVGKVLYIS------ 173
Query: 681 SSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVG 740
H +QI+G+SAT+PN+ +ADWL A YET FRP+ L E I
Sbjct: 174 ----------------RHRIQIIGLSATLPNLDELADWLNAEKYETQFRPIQLHEMIMCD 217
Query: 741 NAIYS-KKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHV 799
+ + + +RTI + + I+ LC E V +G SVL+FCSS+ E A +
Sbjct: 218 SQLRDVNTLQCIRTISSEFTVPNDIEHSIIHLCTESVVKGESVLVFCSSKAETEKLALAI 277
Query: 800 SKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGL-------DPVLEETLPSGVAYHHAG 852
S + SS+++ + + I +L D +L++T+P G+A+HHAG
Sbjct: 278 SHHFGDY---FKSSNNQNLISSLNIQSLEAVKQAFHHEVQFVDDILQKTIPYGIAFHHAG 334
Query: 853 LTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAG 912
LTVEERE +E + + L+R++ ATSTL++G+NLPA RVI + G ++G Y QM G
Sbjct: 335 LTVEERESIENAFHEQLLRIVCATSTLSSGINLPAHRVIIKAQMCGPVALNGLTYMQMIG 394
Query: 913 RAGRTGIDTKG 923
RAGR G KG
Sbjct: 395 RAGRLGQTEKG 405
>gi|148688332|gb|EDL20279.1| mCG128467, isoform CRA_c [Mus musculus]
Length = 408
Score = 270 bits (691), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 244/433 (56%), Gaps = 48/433 (11%)
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KD 616
ML+ L+ K L++LPYV+I EK L LG V Y G++G P +
Sbjct: 1 MLQELLCRQKDVLMILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKG--RFPPIKRREK 58
Query: 617 TSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGE 676
S+ + TIEKA+SLVN ++E RLS +G++V+DELHM+ + +RG +LE+ L K+ Y
Sbjct: 59 KSLYIATIEKAHSLVNALIETSRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLY---- 114
Query: 677 GTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEY 736
TS ++ QI+GMSAT+ NV + +L+A Y + FRPV L+E+
Sbjct: 115 -TSKTT------------------QIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEF 155
Query: 737 IKVGNAIY------SKKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSS 788
+KV + IY + M R + + L DPD +V L EV+ +S L+FC S
Sbjct: 156 LKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALVTEVIP-NYSCLVFCPS 214
Query: 789 RKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVA 847
+K CE+ A + KFL K +N + I +LR G + PVL+ T+P G+A
Sbjct: 215 KKNCENVAEMLCKFLSKDYLNHREKEK-----CEVIKSLRNIGNGKVCPVLKRTVPFGIA 269
Query: 848 YHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY 907
YHH+GLT EER+++E Y G++ +LT TSTLAAGVNLPARRVI R P + F+ +Y
Sbjct: 270 YHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQY 329
Query: 908 RQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVV 967
+QM GRAGR GIDT GES+L+ + ++ ++++ L++ PL +C S T I +
Sbjct: 330 KQMVGRAGRAGIDTAGESILLLQEKDKQQVLELIS---GPLETCCSHLVEEFTKGIQALF 386
Query: 968 AGGIVQTAEDIHR 980
I +D +R
Sbjct: 387 LSLIGLKRKDFYR 399
>gi|148688333|gb|EDL20280.1| mCG128467, isoform CRA_d [Mus musculus]
Length = 405
Score = 269 bits (687), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/416 (39%), Positives = 238/416 (57%), Gaps = 48/416 (11%)
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLP-----KD 616
ML+ L+ K L++LPYV+I EK L LG V Y G++G P +
Sbjct: 1 MLQELLCRQKDVLMILPYVAIVQEKISSLSSFGIELGFFVEEYAGSKG--RFPPIKRREK 58
Query: 617 TSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGE 676
S+ + TIEKA+SLVN ++E RLS +G++V+DELHM+ + +RG +LE+ L K+ Y
Sbjct: 59 KSLYIATIEKAHSLVNALIETSRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLY---- 114
Query: 677 GTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEY 736
TS ++ QI+GMSAT+ NV + +L+A Y + FRPV L+E+
Sbjct: 115 -TSKTT------------------QIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEF 155
Query: 737 IKVGNAIY------SKKMDVVRTI--LTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSS 788
+KV + IY + M R + + L DPD +V L EV+ +S L+FC S
Sbjct: 156 LKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALVTEVIP-NYSCLVFCPS 214
Query: 789 RKGCESTARHVSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAG-LDPVLEETLPSGVA 847
+K CE+ A + KFL K +N + I +LR G + PVL+ T+P G+A
Sbjct: 215 KKNCENVAEMLCKFLSKDYLNHREKEK-----CEVIKSLRNIGNGKVCPVLKRTVPFGIA 269
Query: 848 YHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRY 907
YHH+GLT EER+++E Y G++ +LT TSTLAAGVNLPARRVI R P + F+ +Y
Sbjct: 270 YHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQY 329
Query: 908 RQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAI 963
+QM GRAGR GIDT GES+L+ + ++ ++++ L++ PL +C S T I
Sbjct: 330 KQMVGRAGRAGIDTAGESILLLQEKDKQQVLELIS---GPLETCCSHLVEEFTKGI 382
>gi|154297658|ref|XP_001549255.1| hypothetical protein BC1G_12674 [Botryotinia fuckeliana B05.10]
Length = 762
Score = 268 bits (685), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 245/452 (54%), Gaps = 32/452 (7%)
Query: 824 IDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGV 883
++ LR +GLD VLE+T+ GVA+HHAGLT EER++V Y +G+++V+ AT +LAAG+
Sbjct: 291 LNDLRDTSSGLDQVLEKTVLMGVAFHHAGLTTEERDLVAAAYDEGVLKVMVATCSLAAGI 350
Query: 884 NLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNE 943
NLPARRVI R+G D + + RQM GRAGR G D GE+ L C+ +++ + L+
Sbjct: 351 NLPARRVILHGARMGSDLVGPSMLRQMRGRAGRKGKDEIGETYLCCQKSDLEAVAELMEA 410
Query: 944 SCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDS 1003
P + SCL K G+ A+LEV+A + ++E I YV+ TLL T +++ + +
Sbjct: 411 EIPSVESCLVPGKRGIKRALLEVIATKLATSSESIDDYVKKTLLCHTIDQEELKSMVEIT 470
Query: 1004 LRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHL 1063
L+ L + +E E Y T LG+A SSL PE+ L V +L R+ E FVL ++H+
Sbjct: 471 LKDLLESELVEQTESYS-YEATRLGQAVVASSLAPEDGLFVHKELRRSLEAFVLDCEMHV 529
Query: 1064 VYLSTPIN-VEVEPDWELYYERFLELSALDQS---VGNQVGVSEPYLMRMAHGAPMRISS 1119
+Y TP+ ++ +W+++ E+ LD+S V VG+ + +MA G MR S+
Sbjct: 530 LYTFTPVQAMQGSINWQIFRR---EVDMLDESNLRVLGFVGLKPSLINKMAQGGSMREST 586
Query: 1120 KLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFK 1179
+ + R+ KRFY AL L L E PV V +
Sbjct: 587 P------------------------DEIEITRIYKRFYTALQLRDLCNEMPVHAVARKYD 622
Query: 1180 VARGMVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYV 1239
+ RG +Q L + FA+ + FCE++ W L ++ F +R+ G +++++ L I ++
Sbjct: 623 LPRGTIQNLAQTCHGFAAGMIKFCEKMDWGALAAVLDHFSDRLKAGAKSDLLALAEITFI 682
Query: 1240 KGSRARALYKAGLRTPLAIAEASISEIVKALF 1271
K AR + G +T AIA A + E++ L
Sbjct: 683 KSRTARIFWDNGYKTVGAIAGADLKELIPILL 714
Score = 138 bits (348), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 142/280 (50%), Gaps = 61/280 (21%)
Query: 466 IDSITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSS---WLPSEICSIYKKRGI 522
ID+IT + + +++ A TP+ + L LDLS LP+++ + GI
Sbjct: 31 IDNITVQTYSEY------SQRRQLALTPTPA--LNPLLDLSHPAYQLPNQLVENFAALGI 82
Query: 523 SKLYPWQVECLHVDGVLQR-RNLVYCASTSAGKSFVAEILMLRRLISTG-KMALLVLPYV 580
+Y WQ ECL G L R RNLVY A T GKS VA++LML+ +I K ALLVLPYV
Sbjct: 83 KSIYSWQSECLLRSGALARQRNLVYTAPTGGGKSLVADVLMLKNVIQNPEKKALLVLPYV 142
Query: 581 SICAEKAEHLEVLLEPLGR----------------------HVRSYYGNQGGGSLPKDTS 618
++ EK L +++ + + V +YG + +
Sbjct: 143 ALVQEKLRWLRRIVQGISKETSARESKWPSMWRNRGDENSIRVTGFYGGSKSNATWAEMD 202
Query: 619 VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGT 678
+AVCTIEKANSLVN ++E + +G++++DE+H + D++RGY+LEL+ TKL
Sbjct: 203 IAVCTIEKANSLVNAAIDECSIGNLGVVIMDEIHFINDESRGYILELMATKL-------- 254
Query: 679 SDSSSGENSGTSSGKADPAHGLQIVGMSAT---MPNVAAV 715
G+QIVGMSAT +P++ A+
Sbjct: 255 ---------------LSLEQGVQIVGMSATLDVLPSMDAI 279
>gi|170592397|ref|XP_001900955.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158591650|gb|EDP30255.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 637
Score = 268 bits (685), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 163/432 (37%), Positives = 241/432 (55%), Gaps = 41/432 (9%)
Query: 504 DLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVL--QRRNLVYCASTSAGKSFVAEIL 561
D SW+P+EI Y + GI L WQ++ L+ + Q NL++ A TS+GK+ VAE++
Sbjct: 3 DYPSWVPNEIAVGYIEHGIQALLSWQLDVLNNRSLHAPQYGNLIFSAPTSSGKTVVAELI 62
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAV 621
L + A+ V PY+S+ EK L+ + + V ++ G+ D SV
Sbjct: 63 ALNTVRQLRCKAIFVFPYISVAKEKFLCLQKIWRKVDLRVSAFIGSHSSPFQAWDASV-- 120
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS 681
CTIEKANSL+NRM+ + + +IG++VIDE H++ D NRG L+E ++ K Y +
Sbjct: 121 CTIEKANSLLNRMIADKSIFDIGVLVIDEFHILFDGNRGPLVEQIIGKALYIS------- 173
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGN 741
H +QI+ +SAT+PN+ +ADWL A YET FRPV L E I N
Sbjct: 174 ---------------RHQIQIISLSATLPNLDELADWLNAEKYETQFRPVQLHEMIMCDN 218
Query: 742 AIYSKKMDVVRTILTAAN--LGGKDPDH-IVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+ + ++ ++ I T +N + D ++ I+ LC E V +G SVL+FCSS+ E A
Sbjct: 219 EL--RDVNTLQHIRTVSNEFVVSNDIEYGIIHLCTESVMKGESVLVFCSSKAETEKLALA 276
Query: 799 VSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGL-------DPVLEETLPSGVAYHHA 851
+S+ +K+ SS+SE + I +L+ D +L ETLP G+A+HHA
Sbjct: 277 ISQHFEKY---FKSSNSENLISPFNIQSLKTVKHAFHHEIQFVDDILRETLPHGIAFHHA 333
Query: 852 GLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMA 911
GLTVEERE +E + +R++ ATSTL++G+NLPA RVI + G ++G Y QM
Sbjct: 334 GLTVEERESIENAFCDQSLRIVCATSTLSSGINLPAHRVIIKTQLCGPVALNGLTYMQMI 393
Query: 912 GRAGRTGIDTKG 923
GRAGR G KG
Sbjct: 394 GRAGRLGQTEKG 405
Score = 137 bits (345), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 33/250 (13%)
Query: 1025 TPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEV----EPDWEL 1080
T LG+A F SSL P+ +L V DDL +A L ++LHL+YL TP++ + DW +
Sbjct: 409 TQLGQAVFTSSLSPDIALQVYDDLEKATRSLALDNELHLLYLVTPLHSDSIWMNYIDWNV 468
Query: 1081 YYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITS 1140
YY + +L Q VG +G+ + +++ GK++ R
Sbjct: 469 YYNIWSKLPTKLQRVGKMIGILDSFIL----------------------GKIQGRQASKI 506
Query: 1141 NNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVS 1200
+NM +V RF AL L L++E + +V F++ RG +Q LQ+ + +A MV
Sbjct: 507 SNM-------QVHLRFLSALALYDLIREYSLGDVARRFRINRGALQTLQQQSATYAYMVV 559
Query: 1201 VFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAE 1260
FCE+LGW L ++ F R++FGVR ++ EL I + G RARA + A + T +A
Sbjct: 560 SFCEKLGWTYLRSVLDGFSERLTFGVRKDLTELVQIEGIDGIRARAFHNANITTIPTLAI 619
Query: 1261 ASISEIVKAL 1270
SI +I K L
Sbjct: 620 TSIDDIAKIL 629
>gi|406866261|gb|EKD19301.1| DEAD/DEAH box helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 803
Score = 265 bits (676), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 242/443 (54%), Gaps = 25/443 (5%)
Query: 827 LRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLP 886
LR GLD VLE+T+P GVA+HHAGLT EER+++ T + +G+++V+ AT +LAAG+NLP
Sbjct: 327 LRSTNTGLDQVLEKTVPVGVAFHHAGLTTEERDLIATAFDEGVIKVIVATCSLAAGINLP 386
Query: 887 ARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLLNESCP 946
ARRVI R+G D + + RQM GRAGR G D GE+ L C+ +++ + L+ P
Sbjct: 387 ARRVILHGARMGADLVGPSMLRQMRGRAGRKGKDEIGETYLCCQKSDLEDVAELIEAELP 446
Query: 947 PLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRW 1006
+ SCL DK G+ A+LE++A + + E + Y+R TLL + +++ + +++
Sbjct: 447 SVESCLLPDKKGIKRALLEIIATNMATSDESVDDYMRKTLLYHSIDHKELATLVETTIKE 506
Query: 1007 LCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYL 1066
L + L + Y + LG+A SSL PE+ L V +L +A + FV+ ++H++Y
Sbjct: 507 LEEDQLLHRTDSG--YEASLLGQAIVSSSLTPEDGLFVHKELQKALQAFVMDGEMHVLYS 564
Query: 1067 STPI-NVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMR--ISSKLRD 1123
TP+ + + +W+ + + E+ D+S MR ++ I +K+R
Sbjct: 565 FTPVQSAQTSINWQKFRK---EMEFFDESN-----------MRALEFVGLKPSIINKMRL 610
Query: 1124 STKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARG 1183
+ G G + + T R+ +RFY AL L L E P+ V + +ARG
Sbjct: 611 TGTRAQG------GTMKESTPQEIDTARIYRRFYTALQLRDLCNEMPIHAVARKYDIARG 664
Query: 1184 MVQALQENAGRFASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSR 1243
MVQ L + FA+ + FCER+ W L ++ F +R+ G + +++ L + YVK
Sbjct: 665 MVQNLAQTCHGFAAGMVKFCERMKWGALAVVLDHFSDRLRAGAKPDLLALAQVTYVKSRT 724
Query: 1244 ARALYKAGLRTPLAIAEASISEI 1266
AR ++ G RT A+A A + +I
Sbjct: 725 ARVFWENGFRTVAALAAADVKDI 747
Score = 154 bits (389), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 120/189 (63%), Gaps = 10/189 (5%)
Query: 490 AGTPSSSGMLKDCLDLSS---WLPSEICSIYKKRGISKLYPWQVECLHVDGVLQ-RRNLV 545
A TPS + LDLS LP ++ + GI +YPWQ ECL G L+ NLV
Sbjct: 100 ALTPSVNA--NPMLDLSHRAYGLPPKLTHNLQSLGIKSIYPWQSECLLRSGALEGEANLV 157
Query: 546 YCASTSAGKSFVAEILMLRRLI-STGKMALLVLPYVSICAEKAEHLEVLLEPLGRH---V 601
Y A T GKS VA+ILML+++I S+GK ALLVLPYV++ EK + L ++E + ++ V
Sbjct: 158 YTAPTGGGKSLVADILMLKKVIGSSGKKALLVLPYVALVQEKLKWLRKVVEGIPKNTIRV 217
Query: 602 RSYYGNQGGGSLPKDTSVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGY 661
++G S D +AVCTIEKANSL+N LEE L +G++V+DELHM+ D+ RGY
Sbjct: 218 VGFFGGSKAKSTWHDMEIAVCTIEKANSLINAALEENTLGNLGVVVMDELHMIDDEGRGY 277
Query: 662 LLELLLTKL 670
+LEL+ TKL
Sbjct: 278 ILELMATKL 286
>gi|153792006|ref|NP_001093496.1| DNA polymerase nu [Danio rerio]
gi|108735435|gb|ABG00195.1| DNA polymerase nu [Danio rerio]
Length = 1146
Score = 263 bits (672), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 171/487 (35%), Positives = 260/487 (53%), Gaps = 48/487 (9%)
Query: 1711 RVAQTRALCSVLWKL-------LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQ 1763
+V Q + S+L KL L ++ L + IE ++ VLA ME + + VD E +
Sbjct: 673 KVTQVISNLSLLHKLMEELHYKLRTQGLWQLYSGIEQKMIPVLAAMESYKMHVDKEALKK 732
Query: 1764 ARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKL-------PIPEGHNKGKQ 1816
+L KL+ LE++A+ AG KF + ++A + +L+ L+L +P+ KQ
Sbjct: 733 TSEMLGSKLKQLEQEAHQAAGQKFLVSSSAQLRLILFEKLRLHELCENKKLPKT---VKQ 789
Query: 1817 HPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQ 1876
ST + L L+ HP+ +I E+R + K+ + I S R K + W Q
Sbjct: 790 QQSTSETALLQLQKLHPLPKIILEYRQIHKIKTTFVDGILSCTR------KTFISSTWNQ 843
Query: 1877 TSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLA 1936
TST +GRLS + PN Q + + ++S + G A D ++ R FIP +E W L+
Sbjct: 844 TSTVSGRLSAKHPNFQALPKL-PLQISKKQYIHGKAS-DIVTVHPRAMFIP-REGWTFLS 900
Query: 1937 ADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIY 1996
AD+ Q+ELRL+AH S DP L+ + P D FTM+AA+W G SED V ++R+Q KR++Y
Sbjct: 901 ADFCQVELRLLAHLSADPQLLRIFQSPEADAFTMLAAQWKGVSEDRVSLEDREQAKRIVY 960
Query: 1997 GILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRK 2056
++YG G LS L S+ EA SF ++ V +++ + C G+V S+ GR+
Sbjct: 961 SVVYGAGRERLSGILGVSAEEASRFQDSFLKTYREVPAFIQHTIQHCQSHGFVRSIMGRR 1020
Query: 2057 RFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANF 2116
RFL I + +++A+RQAVN + QGSAAD+ K+AMI I S + DS A
Sbjct: 1021 RFLPHIHSADWSLRNQAERQAVNFVLQGSAADLAKLAMIRICSQVSS-----DSQTA--- 1072
Query: 2117 QMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAAL-------LLVPLLVKIQV 2169
RL+ Q+HDEL+ EV+ S + + +LV+K MES L VPL V +
Sbjct: 1073 -------RLVAQIHDELLFEVEISQLDQFAALVKKTMESLQHIEYLNVNLSVPLKVLLST 1125
Query: 2170 GSTWGSL 2176
G +WGS+
Sbjct: 1126 GRSWGSM 1132
>gi|402591959|gb|EJW85888.1| type III restriction enzyme [Wuchereria bancrofti]
Length = 599
Score = 263 bits (671), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 188/616 (30%), Positives = 311/616 (50%), Gaps = 71/616 (11%)
Query: 701 QIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIY----SKKMDVVRTILT 756
QIVGMSAT+ NV +A +L AA++ T FRPV L E +K+ N++Y K+++ L
Sbjct: 25 QIVGMSATLSNVEQLAKFLNAAVFSTKFRPVKLVEKVKIDNSLYIIQPEGKLELEMN-LG 83
Query: 757 AANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINV---HSS 813
L +DPD +V L ++V + SVLIFC ++K CE+ + +S + K +I +
Sbjct: 84 ENKLKNRDPDGLVPLLYDIVPK-RSVLIFCPTKKNCENVCKMLSHLMPKLAIVKALKNEE 142
Query: 814 DSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVL 873
D EF P+ +LE ++ GVAYHH+GLT +ER+++E Y+ G++ ++
Sbjct: 143 DDEF-------------PS----LLELSITRGVAYHHSGLTADERKIIEGAYQDGIISII 185
Query: 874 TATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPE- 932
TSTLAAGVNLPARRVI P +G++ + +Y QM GRAGR G D GE++ +
Sbjct: 186 CCTSTLAAGVNLPARRVIINAPLVGKESLRKAQYLQMIGRAGRAGYDDMGEAVTVVHSSY 245
Query: 933 EVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDIHRYVRCTLLNSTKP 992
E K + ++N P +S L+E + +L++++ + Q ED+ V+ TL
Sbjct: 246 EESKFLDMINGPLPRCNSSLNEPAM-FSSFLLDLISLKVAQRLEDLEVLVQQTLFGIQNS 304
Query: 993 FQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLS-RA 1051
+ K ++ L +L + + + + YS + G A F +SL P + + LS
Sbjct: 305 GSE--KLLKEMLEYLINHDLVNVDGNGN-YSASLFGMAVFSASLSPLVARQMCTLLSNNL 361
Query: 1052 REGFVLASDLHLVYLSTPINVEVEPDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAH 1111
+EG VL+S HL+++ P ++ V+ DW ++Y+ + L +Q++ ++GV++ L+R
Sbjct: 362 KEGIVLSSHFHLLFMMVPFDISVDIDWNIFYDEYKALPRSEQALLARLGVNDKQLVRCFI 421
Query: 1112 GAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPV 1171
P KL + L R Y++ +L RL ++
Sbjct: 422 DQP-----KLNEGESPL--------------------------RLYISFMLHRLWKQERF 450
Query: 1172 LEVCETFKVARGMVQALQENAGRFASMVSVFCERL-GWYDLEGLIAKFQNRVSFGVRAEI 1230
+V E F V+RG +Q + + AS ++ F E+L ++ L+ L+ + + E+
Sbjct: 451 FDVAERFHVSRGWLQNVLQATCSQASSITRFSEKLPSFWSLKNLLPDLVQHLRDCSQQEL 510
Query: 1231 VELTTIPYVKGSRARALYKAGLRTPLAIAEASISEIVKALFESSSWIAEAQRRVQLGVAK 1290
+ L + VK RAR LY AG +T +IA A ++ S I RR + +
Sbjct: 511 IPLLALDGVKRGRARQLYNAGFKTIGSIASADPLVLL-------STIDHLNRRQANAIIR 563
Query: 1291 KIKNGARKIVLEKAEE 1306
K R + EK EE
Sbjct: 564 SAKVILRDQLAEKVEE 579
>gi|351704072|gb|EHB06991.1| DNA polymerase nu, partial [Heterocephalus glaber]
Length = 892
Score = 260 bits (664), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 291/550 (52%), Gaps = 43/550 (7%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNL-EKEVKKRLSSEAAAAANRSGRWKNQMRRAA 1704
H+ D G+D I +W++ P D S +L K ++K ++ E ++ S R N + +
Sbjct: 329 HVADFVGLDPRIAAWLIDPSDTAPSFEDLVAKHLEKSVTVEVSSTYGNSSR--NNVYQNV 386
Query: 1705 HNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQA 1764
T+ LCS L + L + +E+PL+ VLA ME I V+ E +
Sbjct: 387 RVNLSILYRLTKDLCSKLKARHFANGLWQLFCTLELPLIPVLAVMENHKIQVNKEEMERI 446
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPI--PEGHNKG---KQHPS 1819
LL L+ LE++A+ +AG +F + + + +L+G LKL + P G +Q+PS
Sbjct: 447 SALLGAHLKKLEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLLGPRKSLPGPGLQQYPS 506
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTL-GSICSLARISMSTQKYTLHGHWLQTS 1878
T + L+ L+ HP+ +I E+R + K + + G + + + S+S+ W QT
Sbjct: 507 TSEAVLNSLQDLHPLPKIILEYRQVHKTKSTFVDGLLACMKQGSISST-------WNQTG 559
Query: 1879 TATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAAD 1938
T TGRLS + PN+Q + +++ I+ G E I+ R F+ SQ + LAAD
Sbjct: 560 TVTGRLSAKHPNIQGISKQ-PIQITTPPIFKGE-EDKALTISPRALFVSSQGH-TFLAAD 616
Query: 1939 YSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYG 1997
+SQIELR++AH S DP L+ L + DVF+ + ++W S + V +R+QTK+++Y
Sbjct: 617 FSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKNISIEHVTPADREQTKKVVYS 676
Query: 1998 ILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKR 2057
++YG G L+ L + EA + ++SF + + + ++ CH+ GYV S+ GR+R
Sbjct: 677 VVYGAGKERLAACLGVTVQEATQFLESFLQKYKKIKDFAQATIAQCHRTGYVASILGRRR 736
Query: 2058 FLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQ 2117
L +I N + +++A+RQAVN + QGSAAD+ K+AMI I + + ++L A
Sbjct: 737 PLPRIHARNPELRAQAERQAVNFVVQGSAADLCKMAMIRIFAAVTTS-----TTLTA--- 788
Query: 2118 MLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLL-------VPLLVKIQVG 2170
RL+ Q+HDEL+ EV+ S + E LV++ MES L VPL V + G
Sbjct: 789 ------RLVAQIHDELLFEVEDSQVPEFAVLVRRAMESLQRLWSPELQLQVPLKVSLSAG 842
Query: 2171 STWGSLEPFQ 2180
+WG L P Q
Sbjct: 843 RSWGCLAPLQ 852
>gi|354477872|ref|XP_003501142.1| PREDICTED: DNA polymerase theta-like isoform 2 [Cricetulus griseus]
Length = 2292
Score = 259 bits (663), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 265/535 (49%), Gaps = 83/535 (15%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L LL E L + +E+P LA +EL GIG C ++++Q KL +E +AY
Sbjct: 1762 LNSLLQKENLHDIFCKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQ 1821
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNK-----------------------GKQHP 1818
LAG FS +A DIA VL+ LKLP P G K G+Q
Sbjct: 1822 LAGHSFSFTSADDIAQVLFLELKLP-PNGEMKMQGSKKTLGSTRRGNENGHKLRLGRQF- 1879
Query: 1819 STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTS 1878
ST K L+ L+ HP+ +I E R ++ + + + R++ + L+ Q+
Sbjct: 1880 STSKDVLNKLKALHPLPGLILEWRRISNAITKVVFPLQREKRLNPFLRMERLYP-VSQSH 1938
Query: 1879 TATGRLSMEEPNLQCVEHMVEFKM-----------------------SNEDIYG---GNA 1912
TATGR++ EPN+Q V E KM N+ YG GN
Sbjct: 1939 TATGRITFIEPNIQNVPRDFEIKMPTVVRESPPSQAPGKRLLPMTRGQNKKFYGLHPGNG 1998
Query: 1913 EVDHCK---------INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP 1963
+ K ++ R F+P ++LAADYSQ+ELR++AH S+D LI +L+
Sbjct: 1999 TLMEEKASDRGVPFSVSMRHAFVPF-PGGVILAADYSQLELRILAHLSRDCRLIQVLNT- 2056
Query: 1964 HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIK 2023
DVF IAA W DSVG R Q K++ YGI+YGMG +L EQ+ N+A I
Sbjct: 2057 GADVFRSIAAEWKMIEPDSVGEDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYID 2116
Query: 2024 SFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQ 2083
SFKS + G+ +L V C + G+V+++ GR+R+L IK N K+ A+RQA+N+ Q
Sbjct: 2117 SFKSRYTGINHFLRDTVKKCRRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTTVQ 2176
Query: 2084 GSAADIIKIAMINI-------HSIIVGGVYK------------PDSSLAANFQMLKGRCR 2124
GSAADI+K A +NI HS ++ P L F ++G
Sbjct: 2177 GSAADIVKTATVNIQKQLETFHSAFKSHGHRESMLQHGQTGLLPKKKLKGMFCPMRGGF- 2235
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+LQ+HDEL+ EV + + +V+K ME A L V L VK+++G++WG LE F
Sbjct: 2236 FILQLHDELLYEVAEEDVVQVAQIVKKEMECAVKLSVKLKVKVRMGASWGQLEDF 2290
Score = 211 bits (536), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 196/366 (53%), Gaps = 43/366 (11%)
Query: 919 IDTKGESMLICKPEEVKKIMGLLNESCPPLHSCLS--EDKNGMTHAILEVVAGGIVQTAE 976
+D GES+L+CKP E K + LL S P+HSCL E M AILE++ GG+ T++
Sbjct: 206 MDLLGESILVCKPSEKSKGVALLQGSLEPVHSCLQRQEVTANMIRAILEIIVGGVASTSQ 265
Query: 977 DIHRYVRCTLLNS-TKPFQDVVKSAQDSLR---------WLCHRKFLEWNEDT-----KL 1021
D+ Y CT L + K + ++ QD + WL +F++ E + K+
Sbjct: 266 DMQTYASCTFLAAAVKEGKQGIQRNQDDVHFGAIDACVTWLLENEFIQEAEPSDGSGGKV 325
Query: 1022 YSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVE-VEPDWEL 1080
Y T LG A SSL P ++L + DL RA +GFVL +DLH+VYL TP+ + DW
Sbjct: 326 YHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPVFEDWTGIDWYR 385
Query: 1081 YYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITS 1140
++ + +L + V VGV E +L R G K+ T H
Sbjct: 386 FFCLWEKLPTSMKRVAELVGVEEGFLARCVKG-------KVVARTDRQH----------- 427
Query: 1141 NNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVS 1200
+ + + KRF+ +L+L L+ E P+ E+ + + RG +Q+LQ++A +A M++
Sbjct: 428 -------RQMAIHKRFFTSLVLLDLISEIPLKEINQKYGCNRGQIQSLQQSAAVYAGMIT 480
Query: 1201 VFCERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAE 1260
VF RLGW+++E L+++FQ R++FG++ E+ +L + + RAR LY +G T +A
Sbjct: 481 VFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLIRVSLLNAQRARFLYASGFLTVADLAR 540
Query: 1261 ASISEI 1266
A+++E+
Sbjct: 541 ANVAEV 546
Score = 123 bits (309), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 91/145 (62%), Gaps = 1/145 (0%)
Query: 501 DCLDLSSWL-PSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAE 559
D L L++W P + Y G+ K++ WQ ECL + VL+ +NLVY A TSAGK+ VAE
Sbjct: 66 DQLLLANWGDPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAE 125
Query: 560 ILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSV 619
+L+L+R++ K AL +LP+VS+ EK +L+ L + +G V Y G+ +
Sbjct: 126 LLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSSSPTGRFSSLDI 185
Query: 620 AVCTIEKANSLVNRMLEEGRLSEIG 644
AVCTIE+AN L+NR++EE ++ +G
Sbjct: 186 AVCTIERANGLINRLIEENKMDLLG 210
>gi|358340160|dbj|GAA48113.1| DNA polymerase theta subunit [Clonorchis sinensis]
Length = 1956
Score = 259 bits (662), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 229/422 (54%), Gaps = 77/422 (18%)
Query: 643 IGIIVIDELHMVADQNRGYLLELLLTKL----RYAAGEGTSDSS-SGENSGTSSGKADPA 697
+G++++DELH++ D +RGYLLELLLTKL R E DSS S ++ +
Sbjct: 48 LGLVIVDELHLIGDAHRGYLLELLLTKLLVHSRRVRQESQVDSSLFPSQSSLATQSSRKF 107
Query: 698 HGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYI-------------------- 737
G+QIVGMSAT+PN+ + DWL AA+Y T FRPVPL E++
Sbjct: 108 KGVQIVGMSATLPNLGLLGDWLDAAVYTTTFRPVPLTEFVFSRDSRTSVNHAYLVARSDS 167
Query: 738 -------KVGNAIYSKKMDVVRTIL------TAANLGGKDPDHIVELCDEVVQEGHSVLI 784
+ G+ + S+++ V T L A+L D D + LC + + GH VL+
Sbjct: 168 PQSHHALRSGSNVGSERLQPVSTPLLDSQLSAEAHLTSVDEDGVFSLCLDTLLTGHGVLV 227
Query: 785 FCSSRKGCE----STARHV-----SKFLKKFSINVH------------SSDSEFIDI--- 820
FC +++ CE S A+H+ S FL K N ++ EF I
Sbjct: 228 FCPTKQWCEQLADSMAKHIFTITQSYFLAKEDENTRLPQTARKDEITMTTPGEFGSIGFR 287
Query: 821 ----------TSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLV 870
++ LR+CPAGLDP L L VA+HHAGLTVEEREVVE+ +R G++
Sbjct: 288 LAARLNRSGLMGCVERLRQCPAGLDPSLARCLGYAVAFHHAGLTVEEREVVESGFRSGII 347
Query: 871 RVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICK 930
R+L ATSTL++GVNLPARRVI R P +D Y+QMAGRAGR G+DT G+S+L+CK
Sbjct: 348 RILVATSTLSSGVNLPARRVIIRTPLFHGQILDYLCYKQMAGRAGRQGVDTSGQSILLCK 407
Query: 931 PEEVKKIMGLLNESCPPLHSCLSEDKNG-----MTHAILEVVAGGIVQTAEDIHRYVRCT 985
P ++ ++ L++ P +HSCL + G A+LEV+A G + + Y+ T
Sbjct: 408 PRDLPRVRQLISAGMPAVHSCLMDAFGGSAESTFKRALLEVIANGFISNVAEARHYLSST 467
Query: 986 LL 987
L+
Sbjct: 468 LM 469
Score = 186 bits (473), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/525 (28%), Positives = 240/525 (45%), Gaps = 107/525 (20%)
Query: 1733 EALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTA 1792
E LL +E+P +LA +E G +D++ R+ L + + LE+ A+ LAG F+L +
Sbjct: 1452 EILLQLELPCQALLARVESTGFVLDLDLLRGCRDDLTRNAQLLERVAHRLAGESFNLESP 1511
Query: 1793 ADIANVLYGHLKLP---IPEGH------------------NKGKQHPSTDKHCLDLLRHE 1831
+I+ VL+ L LP P H ++G +P L L
Sbjct: 1512 KEISKVLFARLHLPHLTDPTDHVAAKKRSRVALLTGGRSQSRGPIYPRVTNALLTRLSGL 1571
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARIS----MSTQKYTLHGHWLQTS---TATGRL 1884
HP+ VI + R ++ LL T + + I + QK G T TATGR+
Sbjct: 1572 HPLPSVIIQWRHISCLLTKTFAGLMAACEIHADRFLVDQKTITPGRISPTYDVYTATGRI 1631
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR---DFFIPSQ-----ENWILLA 1936
PN+Q V +DI +D+ +I+ R P + IL++
Sbjct: 1632 VSCFPNIQAVP---------KDIV-----IDYTQIHTRTPPSIIRPRRAFQACSGGILVS 1677
Query: 1937 ADYSQIELRLMAHFSKDPALIGLLS--------------KPHGDVFTMIAARWTG-RSED 1981
AD+ Q+ELRL+AHFS+D L+ LLS P D F +AA W S
Sbjct: 1678 ADFCQLELRLLAHFSRDSDLLKLLSIDGSVDGTDNYLPPPPEQDAFRKLAAHWLRLSSTH 1737
Query: 1982 SVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVS 2041
V S +R Q K++ Y ++YGMG L+ QLN A+ + SF ++PG+ ++ +
Sbjct: 1738 EVTSNQRQQAKQICYALIYGMGVQGLASQLNVPEATAQRLMDSFMYAYPGIQRFISDTIQ 1797
Query: 2042 SCHQKGYVESLKGRKRFLSKI---KFGNNKEK----------------------SKAQRQ 2076
S H+ GYV +L+GR R L + + G++ + +KA+RQ
Sbjct: 1798 SAHRLGYVSTLRGRVRLLPALGDKESGSSSAQPQLTVPLLVRSGPLQTQQYYSTAKAERQ 1857
Query: 2077 AVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLE 2136
AVN++ QGSAA+I K AM+ + ++ + + CRL+L HDEL+ E
Sbjct: 1858 AVNTVIQGSAAEIAKAAMLEVDEVLTSNDWHDN-------------CRLVLHEHDELLYE 1904
Query: 2137 VDPSVIKEAV-SLVQKCMESAAL---LLVPLLVKIQVGSTWGSLE 2177
+ P+ + + +L++ + + L VPL VK+ G W LE
Sbjct: 1905 IVPASLGPVLGALIRHTLARTSQTHGLSVPLPVKLTAGRNWSELE 1949
Score = 168 bits (425), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 192/371 (51%), Gaps = 34/371 (9%)
Query: 1025 TPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEP--DWELYY 1082
T LGRA SSL P L+V ++L RA+ L +DLHL+YL TP+ ++V DW Y
Sbjct: 585 TALGRAVLSSSLGPTHGLVVFEELDRAQRSLALDTDLHLIYLLTPVYLDVGAGLDWFRYL 644
Query: 1083 ERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNN 1142
E + LS D+ V + +G+ E ++ R A GA S+ ST R G +++N
Sbjct: 645 EHYQSLSPADRRVADLIGIEERFITRCAAGA----STSSNTST---------RPGASASN 691
Query: 1143 MLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVF 1202
++ + + +RFY AL L RLV E + V E F V RG++Q+LQ+ A +A MV++F
Sbjct: 692 ----SERVALHRRFYTALTLYRLVCEDGLGTVAEQFGVNRGLLQSLQQQASTYAGMVTIF 747
Query: 1203 CERLGWYDLEGLIAKFQNRVSFGVRAEIVELT-TIPYVKGSRARALYKAGLRTPLAIAEA 1261
C RLGW LE L+A FQ+R+ +GV E+V+L +P V RARALY G + A+A A
Sbjct: 748 CNRLGWIHLERLLAGFQSRLFYGVAEELVDLVRLLPLVNAQRARALYAGGYTSVSAVANA 807
Query: 1262 SISEIVKALFESSSWI--------AEAQRRVQLGVAKKI-KNGARKIVLEKAEEARIAAF 1312
++ + L ++ + A ++ + L + + + A ++++KA++
Sbjct: 808 KPRDLSRLLQRATPFQRGELSAPGALQRQTIMLDDGRYVDEEEAAPLIVQKAKDLLQQDL 867
Query: 1313 SA-FKSLGLNVPQFSRPILSTATENSTGEEEAATTAPRNDKSSSFIFPV----PMEHSDK 1367
+A + + + +P S S + T E +A P+ S + + P EHS
Sbjct: 868 AAVYGTHVITLPATSGTGSSYQSSICTNESDAYPDQPQCPSSVAVMHTSSAMNPEEHSPS 927
Query: 1368 PSLEANQISKK 1378
P N+ ++K
Sbjct: 928 PPFIPNEPTEK 938
>gi|413916518|gb|AFW56450.1| hypothetical protein ZEAMMB73_871172 [Zea mays]
Length = 235
Score = 258 bits (660), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/159 (82%), Positives = 148/159 (93%), Gaps = 1/159 (0%)
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTSVAV 621
MLR+++STG MA+LVLPYVSICAEKAEHLE LLEPLGRHVRS+YGNQGGGSLPKDT+VAV
Sbjct: 1 MLRQILSTGNMAILVLPYVSICAEKAEHLEQLLEPLGRHVRSFYGNQGGGSLPKDTAVAV 60
Query: 622 CTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDS 681
CTIEKANSLVN++LE+GRLSE+G+IVIDELHMV DQ+RGYLLEL+LTKLRYAAGEGT S
Sbjct: 61 CTIEKANSLVNKLLEDGRLSELGVIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGTLQS 120
Query: 682 SSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQ 720
SGE S +SSGK +HGLQI+GMSATMPN+AAVADWLQ
Sbjct: 121 CSGEVSSSSSGKI-ASHGLQIIGMSATMPNIAAVADWLQ 158
>gi|410930462|ref|XP_003978617.1| PREDICTED: DNA polymerase nu-like [Takifugu rubripes]
Length = 635
Score = 258 bits (658), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/496 (34%), Positives = 260/496 (52%), Gaps = 46/496 (9%)
Query: 1701 RRAAHNGCCRRVAQTRALCSVLW------KLLVSEELIEALLNIEIPLVNVLADMELWGI 1754
R A +G + LCS+ W L S L + ++E+ ++ VLA ME + I
Sbjct: 153 RTTAVHGVKKVSQAISGLCSLYWLNVELSSRLQSLGLWDLYTDMELSMIPVLAVMESYHI 212
Query: 1755 GVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKL-------PI 1807
VD E + ++L KKL+ LE++A+ AG F + + + + VL+ L+L +
Sbjct: 213 HVDKEAFQRTSDMLGKKLKQLEQEAHRAAGEIFLITSNSQLRAVLFERLRLHERCENKKL 272
Query: 1808 PEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQK 1867
P N+ + ST + L L+ HP+ +I E+R + K+ + + I S + K
Sbjct: 273 PRTLNRQQ---STSEAVLLQLQDLHPLPKIILEYRQVHKIKSTFVDGILSCVK-----NK 324
Query: 1868 YTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIP 1927
+ W QTS TGR+S + PN Q + I EV KI+ R FIP
Sbjct: 325 DFISSKWHQTSAVTGRISSKHPNFQALPRQPLQITQKGSIQEKEEEV--VKIHPRAMFIP 382
Query: 1928 SQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQE 1987
QE W +AAD+ Q+ELRL+AHFS DP L+ + S P DVFTM+A++W G S V S++
Sbjct: 383 -QEGWTFVAADFCQVELRLLAHFSSDPELLRIFSHPQSDVFTMLASQWKGLSHTEVTSED 441
Query: 1988 RDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKG 2047
R+ KR++Y ++YG G LS L S+ +A + SF ++ V +++ + C Q+G
Sbjct: 442 REHAKRIVYSVVYGAGRERLSGILGVSAEQASQFQDSFLQAYKDVQAFVQKTIQQCRQQG 501
Query: 2048 YVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYK 2107
YV SL GR+R L I + + +A+RQAVN + QGSAAD+ K AMI I +++
Sbjct: 502 YVLSLMGRRRTLPNINVSDWAVRMQAERQAVNFVVQGSAADLCKTAMIRIFNLV------ 555
Query: 2108 PDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES-------AALLL 2160
SS +A RL+ Q+HDEL+ EV+ ++ +LV+ MES L
Sbjct: 556 SSSSRSA---------RLVAQLHDELLYEVEDGEVQVFAALVKSTMESLQHIDHFGVHLK 606
Query: 2161 VPLLVKIQVGSTWGSL 2176
VPL V + +G +WGS+
Sbjct: 607 VPLKVAVSIGKSWGSM 622
>gi|86607628|ref|YP_476390.1| DNA polymerase I [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556170|gb|ABD01127.1| DNA polymerase I [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 931
Score = 258 bits (658), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 164/444 (36%), Positives = 238/444 (53%), Gaps = 45/444 (10%)
Query: 1731 LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
L + + +E+PL VL +ME GI VD E Q L+++L+ LE+KAY AG F+L
Sbjct: 528 LWDLFIQVELPLAQVLEEMEWIGIRVDTEFLRQFSQELEQELQSLEQKAYAQAGETFNLN 587
Query: 1791 TAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNC 1850
+ + ++L+ LKL I + + STD L+ L +HP++ I ++RTLAKL +
Sbjct: 588 SPKQLGSLLFEKLKLDIRKTRKTATGY-STDASVLEKLEGDHPLIETIVQYRTLAKLKST 646
Query: 1851 TLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGG 1910
+ ++ +L R + +H + QT TATGRLS PNLQ + EF
Sbjct: 647 YVDALPALVR----SDTGRVHTDFNQTVTATGRLSSSNPNLQNIPIRTEFSR-------- 694
Query: 1911 NAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI-GLLSKPHGDVFT 1969
R FIP QE W+L AADYSQIELR++AH S++PAL+ G S DV T
Sbjct: 695 ---------RIRQAFIP-QEGWLLTAADYSQIELRILAHLSQEPALLEGFRSG--EDVHT 742
Query: 1970 MIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSF 2029
+ A + E + S+ER K + YG++YGMG + S +EAK+ ++ F +
Sbjct: 743 LTARLLLEKQE--ITSEERRLAKTINYGVIYGMGAQRFARTAGVSLSEAKQFLQRFNERY 800
Query: 2030 PGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADI 2089
G+ ++L + + GYVE++ GR+R+ + K R AVN+ QGSA+DI
Sbjct: 801 AGIFAYLRSTEAFVEKHGYVETILGRRRYFPNLSRLTGHRKQAELRAAVNAPIQGSASDI 860
Query: 2090 IKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLV 2149
IK+AM+ + + NF R RLLLQVHDELV EVDPS + L+
Sbjct: 861 IKVAMVRLRQKL------------QNF-----RSRLLLQVHDELVFEVDPSEWQALKPLI 903
Query: 2150 QKCMESAALLLVPLLVKIQVGSTW 2173
Q+ ME A L +PL+V IQ+G W
Sbjct: 904 QREMEGAVPLSIPLVVDIQIGHNW 927
>gi|359066631|ref|XP_002688485.2| PREDICTED: DNA polymerase nu [Bos taurus]
Length = 1027
Score = 257 bits (657), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 185/565 (32%), Positives = 293/565 (51%), Gaps = 65/565 (11%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA-----ANRSGRWKNQMRRAAHN 1706
G+D I +W++ P D + P+ E V K L + N S + NQ RA
Sbjct: 341 GLDPRIAAWLIDPSD---AAPSFEDLVAKYLGNPTTLTVNSMHGNSSRKTVNQTVRAKLR 397
Query: 1707 GCCRRVAQTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGC 1761
R T LCS L W+L +E+PL+ +LA ME I V+ E
Sbjct: 398 VLHRL---TMHLCSQLQVCGLWQLF---------WTLELPLIPILAVMESHRIRVNKEEM 445
Query: 1762 LQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPI--PEGHNKG---KQ 1816
+ LL +L+ LE++A+ +AG +F + + + +L+G L+L + P+ + ++
Sbjct: 446 ERMSALLGSRLKELEQEAHFVAGEQFLITSNHQLREILFGKLRLHLLRPQDASPATGLRR 505
Query: 1817 HPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQ 1876
PST L+ L+ HP+ +I E+R + K+ + + + + + K ++ W Q
Sbjct: 506 LPSTSGAELNALQDLHPLPRIILEYRQVHKIKSTFVDGLLACMK------KGSVSSTWNQ 559
Query: 1877 TSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILL 1935
T T +GRLS + PN+Q + +H ++ ++ + G E D I+ R F+ S E + L
Sbjct: 560 TGTVSGRLSAKHPNIQGISKHPIQ--ITKPQSFKG--EEDELSISPRTAFV-SSEGYTFL 614
Query: 1936 AADYSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTKRL 1994
AAD+SQIELR++AH S DP L+ L + DVF+ + ++W S + V +R+QTK++
Sbjct: 615 AADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDVSPERVTHADREQTKKV 674
Query: 1995 IYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKG 2054
+Y ++YG G L+ L EA ++SF + + + V+ C Q GYVES+ G
Sbjct: 675 VYAVVYGAGKERLAACLGVPVREAARFLESFLQKYKKIKDFTQATVARCQQTGYVESIMG 734
Query: 2055 RKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAA 2114
R+R L +I+ + + +++A+RQA N + QGSAAD+ K+AMI I + + +L A
Sbjct: 735 RRRPLPRIRAHDPQLRAQAERQAANFVVQGSAADLCKMAMIRIFTAMAT-----SPTLTA 789
Query: 2115 NFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLVKI 2167
RLL Q+HDEL+ EV+ S + E +LVQ ME+ AL L VPL V +
Sbjct: 790 ---------RLLAQIHDELLFEVEDSQVPEFTALVQGTMEALQHVPALELQLQVPLKVSL 840
Query: 2168 QVGSTWGSLEPFQ-ADNYTNVVPDL 2191
G +WG L P Q A TNV P L
Sbjct: 841 SAGRSWGHLVPLQGAPGPTNVPPSL 865
>gi|260794541|ref|XP_002592267.1| hypothetical protein BRAFLDRAFT_70998 [Branchiostoma floridae]
gi|229277483|gb|EEN48278.1| hypothetical protein BRAFLDRAFT_70998 [Branchiostoma floridae]
Length = 595
Score = 257 bits (656), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 180/501 (35%), Positives = 268/501 (53%), Gaps = 51/501 (10%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
T L L KLL + L A N+E+P + LA +EL G G + E C +++ +LR
Sbjct: 104 TFHLMVKLSKLLEEQGLSTAFRNVEMPSLVALARLELNGAGFNPEECETQCQVMKDRLRM 163
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPI---PEGHNKGKQHPSTD-KHCLDLLRH 1830
LE++A+ LAG F+L + + VLY KL I P +++ ++ ST K L+ L+
Sbjct: 164 LEERAHKLAGHTFALNSTKAVDKVLYEEKKLEINEDPSTNSQPQERLSTSRKGVLEKLKT 223
Query: 1831 EHPIVP---VIKEHRTLAKLLNCTLGSICSL-------ARISMSTQKYTLHGHWLQTSTA 1880
HP+ P VI + + ++ LLN + L R++M T + H TA
Sbjct: 224 SHPLHPLPGVILKWKHISNLLN----KVTPLQKKNVYNPRLNMDRIYSTCNLH-----TA 274
Query: 1881 TGRLSMEEPNLQCVEHMVEFKM----SNED--IYGGNAEVDHCKINARDFFIPSQENWIL 1934
TGR++ +PNLQ + E +M +NED G + K+ R FIP + ++
Sbjct: 275 TGRVAFHDPNLQFIPKEFEIEMPTDTNNEDGPPAAGEETMSKRKVCMRHAFIPFK-GGVI 333
Query: 1935 LAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRL 1994
LAADYSQ+E+R+MAH SKD L L+ DVF IA++W G + + V + R Q K+L
Sbjct: 334 LAADYSQLEVRIMAHLSKDSKLTQALNSGQ-DVFKAIASQWKGVAVEHVSDKLRQQAKQL 392
Query: 1995 IYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKG 2054
YGI+YGMGP TL E+L S E K +I++FKSS+ G+ + V C + GYV+++
Sbjct: 393 YYGIIYGMGPKTLGEKLGVSKEEGKRRIETFKSSYTGIQRYRQTTVDQCKRNGYVQTMAE 452
Query: 2055 RKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS---- 2110
R+R+L I + + S+A+RQA N+ QGSAAD++K AM+ I + PD+
Sbjct: 453 RRRYLPDINGEDYYKLSQAERQAFNTTIQGSAADLVKKAMVLIDQRLQQEF--PDTRRSH 510
Query: 2111 ----SLAANFQMLKGRCR----------LLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
S AA K R + L+LQ+HDEL+ EV ++ +V+ ME A
Sbjct: 511 RHGESTAAAADTDKRRSQQPSSPPRGAYLILQLHDELIYEVHEEDEQKVAQIVKHKMEKA 570
Query: 2157 ALLLVPLLVKIQVGSTWGSLE 2177
L V L VK++VG TWG L+
Sbjct: 571 MELSVELPVKVKVGPTWGQLK 591
>gi|332259946|ref|XP_003279044.1| PREDICTED: DNA polymerase nu [Nomascus leucogenys]
Length = 1502
Score = 257 bits (656), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 294/555 (52%), Gaps = 57/555 (10%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNL-EKEVKKRLSSEAAAAANRSGRWKNQMRRAA 1704
H+ D G+D I +W++ P D S +L EK +K ++ + + S R N + +
Sbjct: 942 HVADFVGLDPRIAAWLIDPSDATPSFEDLVEKYCEKSITVKVNSTYGNSSR--NIVNQNV 999
Query: 1705 HNGCCRRVAQTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
T LCS L W+L + +E+PL+ +LA ME I V+ E
Sbjct: 1000 RENLKILYRLTMDLCSKLKDYGLWQLFCT---------LELPLIPILAVMESHAIQVNKE 1050
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG----- 1814
+ LL +L+ LE++A+ +AG +F + + + +L+G LKL + N
Sbjct: 1051 EMEKTSALLGARLKELEQEAHFVAGERFLIMSNNQLREILFGKLKLHLLSQRNSLPRTGL 1110
Query: 1815 KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHW 1874
+++PST + L+ LR HP+ +I E+R + K+ + + + + + K ++ W
Sbjct: 1111 QKYPSTSEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTW 1164
Query: 1875 LQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWI 1933
QT T TGRLS + PN+Q + +H ++ + ++ G ++ I+ R F+ S+ +
Sbjct: 1165 NQTGTVTGRLSAKHPNIQGISKHPIQI-TTPKNFKGKEDKI--LTISPRAMFVSSKGH-T 1220
Query: 1934 LLAADYSQIELRLMAHFSKDPALIGLLSKPH-GDVFTMIAARWTGRSEDSVGSQERDQTK 1992
LAAD+SQIELR++AH S DP L+ L + DVF+ + ++W + V +R+QTK
Sbjct: 1221 FLAADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDVPVEQVTHADREQTK 1280
Query: 1993 RLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESL 2052
+++Y ++YG G L+ L EA + ++SF + + + A++ CHQ GYV S+
Sbjct: 1281 KVVYAVVYGAGKERLAACLGIPVQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGYVVSI 1340
Query: 2053 KGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSL 2112
GR+R L +I + + +++A+RQAVN + QGSAAD+ K+AMI++ + + +L
Sbjct: 1341 MGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAAS-----GTL 1395
Query: 2113 AANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLV 2165
A RL+ Q+HDEL+ EV+ I E +LV++ MES AL L VPL V
Sbjct: 1396 TA---------RLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELRLQVPLKV 1446
Query: 2166 KIQVGSTWGSLEPFQ 2180
+ VG +WG L P Q
Sbjct: 1447 SLSVGRSWGHLVPLQ 1461
>gi|86605248|ref|YP_474011.1| DNA polymerase I [Synechococcus sp. JA-3-3Ab]
gi|86553790|gb|ABC98748.1| DNA polymerase I [Synechococcus sp. JA-3-3Ab]
Length = 928
Score = 256 bits (654), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 237/452 (52%), Gaps = 52/452 (11%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
LW L V +E+PL +VL +ME GI +D E Q L+K+L LE+KAY
Sbjct: 525 LWNLFV---------QVELPLAHVLEEMEWVGIRIDTEFLRQFSQELEKELHSLEQKAYA 575
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEH 1841
AG F+L + + ++L+ LKL + + + STD L+ L +HP++ I ++
Sbjct: 576 QAGEVFNLNSPKQLGSLLFEKLKLDVRKTRKTATGY-STDASVLEKLEGDHPVIETILQY 634
Query: 1842 RTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFK 1901
RTLAKL + + ++ +L R +H + QT TATGRLS PNLQ + EF
Sbjct: 635 RTLAKLKSTYVDALPALVRRDTGR----VHTSFNQTVTATGRLSSSNPNLQNIPIRSEFS 690
Query: 1902 MSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLS 1961
R F+P QE W+L +ADYSQIELR++AH S++P LI
Sbjct: 691 R-----------------RIRQAFVP-QEGWLLASADYSQIELRILAHLSQEPTLIECF- 731
Query: 1962 KPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEK 2021
+ DV T+ A + E V S+ER K + YG++YGMG + S EAKE
Sbjct: 732 RSGEDVHTLTARLLFEKQE--VTSEERRLAKTINYGVIYGMGAQRFARTAGVSLAEAKEF 789
Query: 2022 IKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSI 2081
++ F + GV ++L + + GYVE+L GR+R+ + + K R AVN+
Sbjct: 790 LRRFNERYAGVFAYLRATEAFVEKHGYVETLLGRRRYFPNLSQLSGHRKQAELRAAVNAP 849
Query: 2082 CQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSV 2141
QGSA+DIIK+AM+ + + NF R RLLLQVHDELV EV+PS
Sbjct: 850 IQGSASDIIKVAMVRLQEKL------------QNF-----RSRLLLQVHDELVFEVEPSE 892
Query: 2142 IKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++ L+Q+ ME A L +PL+V IQ+G W
Sbjct: 893 WQDLRPLIQREMEEAVPLSIPLVVDIQIGHNW 924
>gi|194668164|ref|XP_601658.4| PREDICTED: DNA polymerase nu [Bos taurus]
Length = 975
Score = 256 bits (654), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 185/565 (32%), Positives = 293/565 (51%), Gaps = 65/565 (11%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA-----ANRSGRWKNQMRRAAHN 1706
G+D I +W++ P D + P+ E V K L + N S + NQ RA
Sbjct: 341 GLDPRIAAWLIDPSD---AAPSFEDLVAKYLGNPTTLTVNSMHGNSSRKTVNQTVRAKLR 397
Query: 1707 GCCRRVAQTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGC 1761
R T LCS L W+L +E+PL+ +LA ME I V+ E
Sbjct: 398 VLHRL---TMHLCSQLQVCGLWQLF---------WTLELPLIPILAVMESHRIRVNKEEM 445
Query: 1762 LQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPI--PEGHNKG---KQ 1816
+ LL +L+ LE++A+ +AG +F + + + +L+G L+L + P+ + ++
Sbjct: 446 ERMSALLGSRLKELEQEAHFVAGEQFLITSNHQLREILFGKLRLHLLRPQDASPATGLRR 505
Query: 1817 HPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQ 1876
PST L+ L+ HP+ +I E+R + K+ + + + + + K ++ W Q
Sbjct: 506 LPSTSGAELNALQDLHPLPRIILEYRQVHKIKSTFVDGLLACMK------KGSVSSTWNQ 559
Query: 1877 TSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILL 1935
T T +GRLS + PN+Q + +H ++ ++ + G E D I+ R F+ S E + L
Sbjct: 560 TGTVSGRLSAKHPNIQGISKHPIQ--ITKPQSFKG--EEDELSISPRTAFV-SSEGYTFL 614
Query: 1936 AADYSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTKRL 1994
AAD+SQIELR++AH S DP L+ L + DVF+ + ++W S + V +R+QTK++
Sbjct: 615 AADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDVSPERVTHADREQTKKV 674
Query: 1995 IYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKG 2054
+Y ++YG G L+ L EA ++SF + + + V+ C Q GYVES+ G
Sbjct: 675 VYAVVYGAGKERLAACLGVPVREAARFLESFLQKYKKIKDFTQATVARCQQTGYVESIMG 734
Query: 2055 RKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAA 2114
R+R L +I+ + + +++A+RQA N + QGSAAD+ K+AMI I + + +L A
Sbjct: 735 RRRPLPRIRAHDPQLRAQAERQAANFVVQGSAADLCKMAMIRIFTAMAT-----SPTLTA 789
Query: 2115 NFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLVKI 2167
RLL Q+HDEL+ EV+ S + E +LVQ ME+ AL L VPL V +
Sbjct: 790 ---------RLLAQIHDELLFEVEDSQVPEFTALVQGTMEALQHVPALELQLQVPLKVSL 840
Query: 2168 QVGSTWGSLEPFQ-ADNYTNVVPDL 2191
G +WG L P Q A TNV P L
Sbjct: 841 SAGRSWGHLVPLQGAPGPTNVPPSL 865
>gi|349605499|gb|AEQ00715.1| Helicase POLQ-like-like protein, partial [Equus caballus]
Length = 510
Score = 256 bits (653), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/522 (32%), Positives = 272/522 (52%), Gaps = 84/522 (16%)
Query: 823 AIDALRRCPAG-LDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAA 881
I L+ G L PVL+ T+P GVAYHH+GLT EER+++E Y G++ + T TSTLAA
Sbjct: 13 VIQNLKNLSGGSLCPVLKRTIPFGVAYHHSGLTSEERKLLEEAYSTGVLCLFTCTSTLAA 72
Query: 882 GVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESMLICKPEEVKKIMGLL 941
GVNLPARRVI R P + ++F+ +Y+QM GRAGR GID+ GES+LI + ++ +K++ L+
Sbjct: 73 GVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAGRAGIDSTGESILILQEKDKQKVLELI 132
Query: 942 NESCPPLHSCLS----EDKNGMTHAILEVVAGGIVQTAEDIHRYVRCT-------LLNST 990
+ PL +C S E G+ L ++ I +DI+ ++ T +L
Sbjct: 133 SR---PLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMSGTFFGVQQKILLKE 189
Query: 991 KPFQDVVKSAQDSLRWLCHRKFLEWNEDTKL---------------------YSTTPLGR 1029
K D+ DSLR+L + L+ +DT L + T LGR
Sbjct: 190 KTLWDI---TVDSLRYLTEKGLLQ--KDTILTEKGLLQKDTICKSEEEFQYSFQITNLGR 244
Query: 1030 AAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINV--EVEPDWELYYERFLE 1087
A+F ++ ++ DL + EG VL S LHL+YL+TP ++ + +PDW +Y+ +F +
Sbjct: 245 ASFKGTIDLAYCDVLYRDLKKGLEGLVLESLLHLIYLTTPYDMASQCDPDWMIYFRQFSQ 304
Query: 1088 LSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNNMLSDA 1147
LS +Q+V VGVSE +L + A G ++ + KG
Sbjct: 305 LSPAEQNVAALVGVSENFLGKKASGQAIK-----KKVDKG-------------------- 339
Query: 1148 QTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCERL- 1206
+ R Y++ +L L++ET + V E F + RG VQ L A F+S V FCE L
Sbjct: 340 ----IVNRLYLSFVLFTLLKETNIWSVSEKFNMPRGYVQNLLTAAASFSSCVLHFCEELE 395
Query: 1207 GWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASISEI 1266
++ L+ + ++++ V+AE++ L + V +RA+ LY AG ++ + +A A+ +
Sbjct: 396 EFWVYRVLLVELTKKLTYCVKAELIPLMEVTGVLEARAKQLYSAGYKSLMHLANANPEVL 455
Query: 1267 VKALFESSSWIAEAQRRVQLGVAKKIKNGARKIVLEKAEEAR 1308
++ I RR AK+I + A+ ++ EKAE R
Sbjct: 456 IRT-------IDHLSRR----QAKQIVSSAKMLLHEKAEALR 486
>gi|432920607|ref|XP_004079967.1| PREDICTED: DNA polymerase nu-like [Oryzias latipes]
Length = 698
Score = 256 bits (653), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 284/543 (52%), Gaps = 63/543 (11%)
Query: 1657 IVSWILWPDDERSSNPNL-EKEVKKRLSSEAAAAANRSGR-----WKNQMRRAAHNGCCR 1710
+ W+L P D+ + +L K KK S+ + S W +++ H C
Sbjct: 190 VSGWLLDPADQAACYQDLLYKHCKKARSTHSLGPKKVSQILSDLCWLHKL----HMILCS 245
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
++ Q+R L WKL ++E+ ++ VLA ME I VD E + +LL
Sbjct: 246 KL-QSRGL----WKLYT---------DVELKMIPVLAAMESHCIYVDKETLKKMSDLLGT 291
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKL-------PIPEGHNKGKQHPSTDKH 1823
KL+ LE++A+ AG +F + +++ + VL+ L+L +P+ NK + ST +
Sbjct: 292 KLKQLEQEAHQAAGQRFLVTSSSQLRTVLFEKLRLHEYCENKKLPKTINKQQ---STSEA 348
Query: 1824 CLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGR 1883
L L+ HP+ +I E+R + K+ + + I + M ++ Y + W QTS TGR
Sbjct: 349 ALLQLQDLHPLPKIILEYRQVHKIKSTFIDGILT----CMKSKNY-ISSTWCQTSAVTGR 403
Query: 1884 LSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIE 1943
+S + PN Q + ++GG EV ++ R F+P + W LAAD+ Q+E
Sbjct: 404 ISAKHPNFQALPKQPLQITKKLFVHGGAEEV--VTVHPRAMFVP-HKGWTFLAADFCQVE 460
Query: 1944 LRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMG 2003
LRL+AHFS DP L+ L + P DVFTM+AA+W G + + V S++R+ KR+IY ++YG G
Sbjct: 461 LRLLAHFSSDPDLLHLFTIPQADVFTMLAAQWKGLNMEDVSSEDREHAKRIIYSVIYGAG 520
Query: 2004 PNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIK 2063
LS L S+ +A + F ++ V +++ + H++GYV S+ GR+R L I
Sbjct: 521 RERLSGILGVSAEQASQFQHRFLQTYRDVQTFIQKTIQQSHKQGYVLSIMGRRRNLPDIN 580
Query: 2064 FGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRC 2123
+ + +++RQAVN + QGSAAD+ K+AMI I +++ SSL A
Sbjct: 581 SPDWGVRMQSERQAVNFVVQGSAADLCKMAMIRIFNLV-----STSSSLTA--------- 626
Query: 2124 RLLLQVHDELVLEVDPSVIKEAVSLVQKCMES-------AALLLVPLLVKIQVGSTWGSL 2176
RL+ Q+HDEL+ EV+ S ++ +LV+ MES L VPL V + G TWGS+
Sbjct: 627 RLVAQLHDELLYEVEDSQLEPFATLVKSTMESLQHIDHLGVHLKVPLKVAVSSGKTWGSM 686
Query: 2177 EPF 2179
F
Sbjct: 687 SEF 689
>gi|414153052|ref|ZP_11409379.1| DNA polymerase I [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455434|emb|CCO07281.1| DNA polymerase I [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 884
Score = 256 bits (653), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/529 (32%), Positives = 268/529 (50%), Gaps = 59/529 (11%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKE-VKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D + +++L P + + P++ E + L SE AA
Sbjct: 414 AFDTMVAAYLLNPAETQYDLPDIALEHLGMVLPSEGEAA------------------LAT 455
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
R L VLW+ L E+ +E+PLV++LA+ME+ G+ VD +G + + L
Sbjct: 456 RAEAVLRLVDVLWQKLAQREVDRLFAEVELPLVSILAEMEIAGVAVDKQGLKELSDELHH 515
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+ L K Y LAG F++ + + ++L+ LKLP+ + K + STD L+ L
Sbjct: 516 NIENLAAKIYELAGEHFNINSPKQLGHILFEKLKLPV---YKKTRTGYSTDAEVLEKLAA 572
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
EH +V ++ ++R LAKL + + +L ++ Q LH + QT TATGRLS EPN
Sbjct: 573 EHEMVDLLLQYRQLAKLKSTYADGLAAL----VNRQTGCLHSTFHQTVTATGRLSSAEPN 628
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + + S I R FIP Q+ ++L ADYSQIELR++AH
Sbjct: 629 LQNIPIRLA---SGRRI--------------RKVFIPRQQGNLILTADYSQIELRILAHM 671
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
S+D + + D+ T AA G S D V R + K + +GI+YG+ L+
Sbjct: 672 SQDKNFLEAFQQGQ-DIHTRTAAEVFGVSLDQVTPDMRSRAKAVNFGIVYGISDFGLARD 730
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L S EAK+ I+S+ + PGV ++ + ++GYV +L R+R+L ++ N +
Sbjct: 731 LKVSRQEAKQYIESYFARCPGVRRYIDRVIKEARERGYVTTLLNRRRYLPELFSKNFNIR 790
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
+ +R AVN+ QGSAADIIK+AM+ I+ + G NF +++LQVH
Sbjct: 791 NFGERAAVNTPIQGSAADIIKLAMVKINQALKKG----------NFT-----AQMVLQVH 835
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
DEL+ + + I+ + LV+ CME+A L VPL+V I++G+ W +P
Sbjct: 836 DELIFDAPAAEIEPLIVLVRDCMENALPLDVPLMVDIKLGTNWYDTKPI 884
>gi|397483600|ref|XP_003812987.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase nu [Pan paniscus]
Length = 1502
Score = 256 bits (653), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 287/549 (52%), Gaps = 45/549 (8%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH 1705
H+ D G+D I +W++ P D + P+ E V+K N + + N R +
Sbjct: 942 HVADFIGLDPRIAAWLIDPSD---ATPSFEDLVEKYCEKSITVKVNST--YGNSSRNIVN 996
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
C + L L L L + +E+PL+ +LA ME I V+ E +
Sbjct: 997 QNVCENLKTLYRLTMDLCSKLKDYGLWQLFCTLELPLIPILAVMESHAIQVNKEEMEKTS 1056
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG-----KQHPST 1820
LL +L+ LE++A+ +AG +F + + + +L+G LKL + N +++PST
Sbjct: 1057 ALLGARLKELEQEAHFVAGERFLIMSNNQLREILFGKLKLHLLSQRNSLPRTGLQKYPST 1116
Query: 1821 DKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTA 1880
+ L+ LR HP+ +I E+R + K+ + + + + + K ++ W QT T
Sbjct: 1117 SEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTWNQTGTV 1170
Query: 1881 TGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADY 1939
TGRLS + PN+Q + +H ++ + ++ G ++ I+ R F+ S+ + LAAD+
Sbjct: 1171 TGRLSAKHPNIQGISKHPIQI-TTPKNFKGKEDKI--LTISPRAMFVSSKGH-TFLAADF 1226
Query: 1940 SQIELRLMAHFSKDPALIGLLSKPH-GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGI 1998
SQIELR++AH S DP L+ L + DVF+ + ++W + V +R+QTK+++Y +
Sbjct: 1227 SQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAV 1286
Query: 1999 LYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF 2058
+YG G L+ L EA + ++SF + + + A++ CHQ G V S+ GR+R
Sbjct: 1287 VYGAGKERLAACLGVPVQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRP 1346
Query: 2059 LSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQM 2118
L +I + + +++A+RQAVN + QGSAAD+ K+AMI++ + + +L A
Sbjct: 1347 LPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAAS-----HTLTA---- 1397
Query: 2119 LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLVKIQVGS 2171
RL+ Q+HDEL+ EV+ I E +LV++ MES AL L VPL V + G
Sbjct: 1398 -----RLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGR 1452
Query: 2172 TWGSLEPFQ 2180
+WG L P Q
Sbjct: 1453 SWGHLVPLQ 1461
>gi|402852468|ref|XP_003890944.1| PREDICTED: DNA polymerase nu [Papio anubis]
Length = 1357
Score = 255 bits (652), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 293/555 (52%), Gaps = 57/555 (10%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNL-EKEVKKRLSSEAAAAANRSGRWKNQMRRAA 1704
H+ D G+D I +W++ P D S +L EK +K ++ + + S R N + +
Sbjct: 797 HVADFVGLDPRIAAWLIDPSDAIPSFEDLVEKYCEKSITVKVNSTYGNSSR--NIVNQNV 854
Query: 1705 HNGCCRRVAQTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
+ T LCS L W+L + +E+PL+ +LA ME I V+ E
Sbjct: 855 RDSLKILYRLTMDLCSKLKEYGLWQLFCT---------LELPLIPILAVMENHAIQVNKE 905
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG----- 1814
+ LL +L+ LE++A+ +AG +F + ++ + +L+G LKL + N
Sbjct: 906 EMEKISALLGARLKELEQEAHFVAGERFLIMSSNQLREILFGKLKLHLLSRRNSLPRTGL 965
Query: 1815 KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHW 1874
+++PST + L+ LR HP+ +I E+R + K+ + + + + + K ++ W
Sbjct: 966 QKYPSTSEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTW 1019
Query: 1875 LQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWI 1933
QT T TGRLS + PN+Q + +H ++ ++ G E+ I+ R F+ S+ +
Sbjct: 1020 NQTGTVTGRLSAKHPNIQGISKHPIQI-TKPKNFKGKEDEI--LTISPRAMFVSSKGH-T 1075
Query: 1934 LLAADYSQIELRLMAHFSKDPALIGLLSKPH-GDVFTMIAARWTGRSEDSVGSQERDQTK 1992
LAAD+SQIELR++AH S DP L+ L + DVF+ + ++W + V +R+QTK
Sbjct: 1076 FLAADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDVPMEHVTHADREQTK 1135
Query: 1993 RLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESL 2052
R++Y ++YG G L+ L EA + ++SF + + + A++ CHQ GYV S+
Sbjct: 1136 RVVYAVVYGAGKERLAACLGVPVQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGYVVSI 1195
Query: 2053 KGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSL 2112
GR+R L +I + + +++A+RQAVN + QGSAAD+ K+AMI + + + +L
Sbjct: 1196 MGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIRVFTAVATS-----RTL 1250
Query: 2113 AANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLV 2165
A RL+ Q+HDEL+ EV+ I E +LV++ MES AL L VPL V
Sbjct: 1251 TA---------RLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKV 1301
Query: 2166 KIQVGSTWGSLEPFQ 2180
+ G +WG L P Q
Sbjct: 1302 SLSAGRSWGHLLPLQ 1316
>gi|297282109|ref|XP_002802209.1| PREDICTED: DNA polymerase nu-like [Macaca mulatta]
Length = 1484
Score = 255 bits (652), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 293/555 (52%), Gaps = 57/555 (10%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNL-EKEVKKRLSSEAAAAANRSGRWKNQMRRAA 1704
H+ D G+D I +W++ P D S +L EK +K ++ + + S R N + +
Sbjct: 942 HVADFVGLDPRIAAWLIDPSDAVPSFEDLVEKYCEKSITVKVNSTYENSSR--NIVNQNV 999
Query: 1705 HNGCCRRVAQTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
+ T LCS L W+L + +E+PL+ +LA ME I V+ E
Sbjct: 1000 RDNLKILYRLTMDLCSKLKEYGLWQLFCT---------LEVPLIPILAVMESHAIQVNKE 1050
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG----- 1814
+ LL +L+ LE++A+ +AG +F + ++ + +L+G LKL + N
Sbjct: 1051 EMEKISALLGARLKKLEQEAHFVAGERFLIMSSNQLREILFGKLKLHLLSRRNSLPRTGL 1110
Query: 1815 KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHW 1874
+++PST + L+ LR HP+ +I E+R + K+ + + + + + K ++ W
Sbjct: 1111 QKYPSTSEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTW 1164
Query: 1875 LQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWI 1933
QT T TGRLS + PN+Q + +H ++ ++ G E+ I+ R F+ S+ +
Sbjct: 1165 NQTGTVTGRLSAKHPNIQGISKHPIQI-TKPKNFKGKEDEI--LTISPRAMFVSSKGH-T 1220
Query: 1934 LLAADYSQIELRLMAHFSKDPALIGLLSKPH-GDVFTMIAARWTGRSEDSVGSQERDQTK 1992
LAAD+SQIELR++AH S DP L+ L + DVF+ + ++W + V +R+QTK
Sbjct: 1221 FLAADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDVPMEHVTHADREQTK 1280
Query: 1993 RLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESL 2052
R++Y ++YG G L+ L EA + ++SF + + + A++ CH+ GYV S+
Sbjct: 1281 RVVYAVVYGAGKERLAACLGVPVQEAAQFLESFLQKYKKIKDFARAAIAQCHRTGYVVSI 1340
Query: 2053 KGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSL 2112
GR+R L +I + + +++A+RQAVN + QGSAAD+ K+AMI + + + +L
Sbjct: 1341 MGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIRVFTAVATS-----RTL 1395
Query: 2113 AANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLV 2165
A RL+ Q+HDEL+ EV+ I E +LV++ MES AL L VPL V
Sbjct: 1396 TA---------RLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKV 1446
Query: 2166 KIQVGSTWGSLEPFQ 2180
+ G +WG L P Q
Sbjct: 1447 SLSAGRSWGHLLPLQ 1461
>gi|338723790|ref|XP_001489138.3| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase nu [Equus caballus]
Length = 901
Score = 255 bits (652), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 178/560 (31%), Positives = 293/560 (52%), Gaps = 67/560 (11%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH 1705
H+ D G+D I +W++ P D + P+ E V K L E + S + N R +
Sbjct: 341 HVADFVGLDPRIAAWLIDPSD---AAPSFEDLVAKYL--ENSITVKVSSTYGNSSRNIVN 395
Query: 1706 NGCCRRVA----QTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGV 1756
C + T LCS L W+L + +E+PL+ +LA ME I V
Sbjct: 396 QNVCANLRILYRLTMGLCSQLKIYGLWQLFCT---------LELPLIPILAVMESHNIQV 446
Query: 1757 DMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKL-------PIPE 1809
+ + + +L +L+ LE++A+ +AG +F + + + +L+G LKL +P+
Sbjct: 447 NKDEMERTSAVLGSRLKELEQEAHFVAGEQFLITSNNQLREILFGKLKLHLLRPRETLPK 506
Query: 1810 GHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT 1869
+G H ST + L++L++ HP+ +I E+R + K+ + + + + + K +
Sbjct: 507 TGLQG--HLSTSEAMLNVLQNFHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGS 558
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+ W QT T TGRLS + PN+Q + +H ++ ++ + G E D I+ R F+ S
Sbjct: 559 ISSTWNQTGTVTGRLSAKRPNIQGISKHPIQ--ITKPQNFKGK-EDDILTISPRTMFV-S 614
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQE 1987
E LAAD+SQIELR++AH S DP L+ L + DVF+ + ++W + V E
Sbjct: 615 SEGHTFLAADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDIPSECVTHVE 674
Query: 1988 RDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKG 2047
R+QTK+++Y ++YG G L+ L + EA ++ F + + + ++ CHQ G
Sbjct: 675 REQTKKVVYSVVYGAGKERLAACLGVTVQEAARFLEXFLQKYKKIKDFAQATIARCHQTG 734
Query: 2048 YVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYK 2107
YV S+ GR+R L +I+ + + +++A+RQAVN + QGSAAD+ K+AMI+I + +
Sbjct: 735 YVASIMGRRRPLPRIRAQDQQLRAQAERQAVNFVVQGSAADLCKMAMIHIFAAVATS--- 791
Query: 2108 PDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LL 2160
+L A RL+ Q+HDEL+ EV+ S + E +LV+ MES AL L
Sbjct: 792 --PTLTA---------RLVAQIHDELLFEVEDSQVPEFSALVRGTMESLQHVQALELQLQ 840
Query: 2161 VPLLVKIQVGSTWGSLEPFQ 2180
VPL V + G +WG L P Q
Sbjct: 841 VPLKVSLSAGRSWGHLVPLQ 860
>gi|332818964|ref|XP_001147379.2| PREDICTED: DNA polymerase nu isoform 3 [Pan troglodytes]
Length = 1502
Score = 255 bits (651), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 287/549 (52%), Gaps = 45/549 (8%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH 1705
H+ D G+D I +W++ P D + P+ E V+K N + + N R +
Sbjct: 942 HVADFIGLDPRIAAWLIDPSD---ATPSFEDLVEKYCEKSLTVKVNST--YGNSSRNIVN 996
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
C + L L L L + +E+PL+ +LA ME I V+ E +
Sbjct: 997 QNVCENLKTLYRLTMDLCSKLKDYGLWQLFCTLELPLIPILAVMESHAIQVNKEEMEKTS 1056
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG-----KQHPST 1820
LL +L+ LE++A+ +AG +F + + + +L+G LKL + N +++PST
Sbjct: 1057 ALLGARLKELEQEAHFVAGERFLIMSNNQLREILFGKLKLHLLSQRNSLPRTGLQKYPST 1116
Query: 1821 DKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTA 1880
+ L+ LR HP+ +I E+R + K+ + + + + + K ++ W QT T
Sbjct: 1117 SEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTWNQTGTV 1170
Query: 1881 TGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADY 1939
TGRLS + PN+Q + +H ++ + ++ G ++ I+ R F+ S+ + LAAD+
Sbjct: 1171 TGRLSAKHPNIQGISKHPIQI-TTPKNFKGKEDKI--LTISPRAMFVSSKGH-TFLAADF 1226
Query: 1940 SQIELRLMAHFSKDPALIGLLSKPH-GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGI 1998
SQIELR++AH S DP L+ L + DVF+ + ++W + V +R+QTK+++Y +
Sbjct: 1227 SQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAV 1286
Query: 1999 LYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF 2058
+YG G L+ L EA + ++SF + + + A++ CHQ G V S+ GR+R
Sbjct: 1287 VYGAGKERLAACLGVPVQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRP 1346
Query: 2059 LSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQM 2118
L +I + + +++A+RQAVN + QGSAAD+ K+AMI++ + + +L A
Sbjct: 1347 LPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAAS-----HTLTA---- 1397
Query: 2119 LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLVKIQVGS 2171
RL+ Q+HDEL+ EV+ I E +LV++ MES AL L VPL V + G
Sbjct: 1398 -----RLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGR 1452
Query: 2172 TWGSLEPFQ 2180
+WG L P Q
Sbjct: 1453 SWGHLVPLQ 1461
>gi|355744799|gb|EHH49424.1| DNA polymerase nu [Macaca fascicularis]
Length = 900
Score = 254 bits (650), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 293/555 (52%), Gaps = 57/555 (10%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNL-EKEVKKRLSSEAAAAANRSGRWKNQMRRAA 1704
H+ D G+D I +W++ P D S +L EK +K ++ + + S R N + +
Sbjct: 340 HVADFVGLDPRIAAWLIDPSDAVPSFEDLVEKYCEKSITVKVNSTYENSSR--NIVNQNV 397
Query: 1705 HNGCCRRVAQTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
+ T LCS L W+L + +E+PL+ +LA ME I V+ E
Sbjct: 398 RDNLKILYRLTMDLCSKLKEYGLWQLFCT---------LEVPLIPILAVMESHAIQVNKE 448
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG----- 1814
+ LL +L+ LE++A+ +AG +F + ++ + +L+G LKL + N
Sbjct: 449 EMEKISALLGARLKELEQEAHFVAGERFLIMSSNQLREILFGKLKLHLLSRRNSLPRTGL 508
Query: 1815 KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHW 1874
+++PST + L+ LR HP+ +I E+R + K+ + + + + + K ++ W
Sbjct: 509 QKYPSTSEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTW 562
Query: 1875 LQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWI 1933
QT T TGRLS + PN+Q + +H ++ ++ G E+ I+ R F+ S+ +
Sbjct: 563 NQTGTVTGRLSAKHPNIQGISKHPIQI-TKPKNFKGKEDEI--LTISPRAMFVSSKGH-T 618
Query: 1934 LLAADYSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTK 1992
LAAD+SQIELR++AH S DP L+ L + DVF+ + ++W + V +R+QTK
Sbjct: 619 FLAADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDVPMEHVTHADREQTK 678
Query: 1993 RLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESL 2052
R++Y ++YG G L+ L EA + ++SF + + + A++ CH+ GYV S+
Sbjct: 679 RVVYAVVYGAGKERLAACLGVPVQEAAQFLESFLQKYKKIKDFARAAIAQCHRTGYVVSI 738
Query: 2053 KGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSL 2112
GR+R L +I + + +++A+RQAVN + QGSAAD+ K+AMI + + + +L
Sbjct: 739 MGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIRVFTAVATS-----RTL 793
Query: 2113 AANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLV 2165
A RL+ Q+HDEL+ EV+ I E +LV++ MES AL L VPL V
Sbjct: 794 TA---------RLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKV 844
Query: 2166 KIQVGSTWGSLEPFQ 2180
+ G +WG L P Q
Sbjct: 845 SLSAGRSWGHLLPLQ 859
>gi|355557403|gb|EHH14183.1| DNA polymerase nu [Macaca mulatta]
Length = 900
Score = 254 bits (650), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 293/555 (52%), Gaps = 57/555 (10%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNL-EKEVKKRLSSEAAAAANRSGRWKNQMRRAA 1704
H+ D G+D I +W++ P D S +L EK +K ++ + + S R N + +
Sbjct: 340 HVADFVGLDPRIAAWLIDPSDAVPSFEDLVEKYCEKSITVKVNSTYENSSR--NIVNQNV 397
Query: 1705 HNGCCRRVAQTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
+ T LCS L W+L + +E+PL+ +LA ME I V+ E
Sbjct: 398 RDNLKILYRLTMDLCSKLKEYGLWQLFCT---------LEVPLIPILAVMESHAIQVNKE 448
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG----- 1814
+ LL +L+ LE++A+ +AG +F + ++ + +L+G LKL + N
Sbjct: 449 EMEKISALLGARLKELEQEAHFVAGERFLIMSSNQLREILFGKLKLHLLSRRNSLPRTGL 508
Query: 1815 KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHW 1874
+++PST + L+ LR HP+ +I E+R + K+ + + + + + K ++ W
Sbjct: 509 QKYPSTSEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTW 562
Query: 1875 LQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWI 1933
QT T TGRLS + PN+Q + +H ++ ++ G E+ I+ R F+ S+ +
Sbjct: 563 NQTGTVTGRLSAKHPNIQGISKHPIQI-TKPKNFKGKEDEI--LAISPRAMFVSSKGH-T 618
Query: 1934 LLAADYSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTK 1992
LAAD+SQIELR++AH S DP L+ L + DVF+ + ++W + V +R+QTK
Sbjct: 619 FLAADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDVPMEHVTHADREQTK 678
Query: 1993 RLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESL 2052
R++Y ++YG G L+ L EA + ++SF + + + A++ CH+ GYV S+
Sbjct: 679 RVVYAVVYGAGKERLAACLGVPVQEAAQFLESFLQKYKKIKDFARAAIAQCHRTGYVVSI 738
Query: 2053 KGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSL 2112
GR+R L +I + + +++A+RQAVN + QGSAAD+ K+AMI + + + +L
Sbjct: 739 MGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIRVFTAVATS-----RTL 793
Query: 2113 AANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLV 2165
A RL+ Q+HDEL+ EV+ I E +LV++ MES AL L VPL V
Sbjct: 794 TA---------RLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKV 844
Query: 2166 KIQVGSTWGSLEPFQ 2180
+ G +WG L P Q
Sbjct: 845 SLSAGRSWGHLLPLQ 859
>gi|344279220|ref|XP_003411388.1| PREDICTED: DNA polymerase nu [Loxodonta africana]
Length = 904
Score = 254 bits (650), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 280/543 (51%), Gaps = 43/543 (7%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
G+D I +W++ P D + P+ E V K L N + + N R + C
Sbjct: 347 GLDPRIAAWLIDPGD---TVPSFEDLVAKYLEKSITVKVNST--YGNSPRNIVNQNVCVN 401
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
+ +L L L L + +E+PL+ +LA ME I V+ E + LL +
Sbjct: 402 LRILYSLMMDLCSKLKVYGLWQLFCTLELPLIPILAVMESHKIQVNKEEMERTSALLGSR 461
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPI-----PEGHNKGKQHPSTDKHCLD 1826
L+ LE++A+ +AG +F + + + +L+G KL + ++ PST + L+
Sbjct: 462 LKELEQEAHFVAGEQFLITSNHQLREILFGKFKLHLLCQKKTLAKTALQKSPSTSEAVLN 521
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
+L+ HP+ +I E+R + K+ + + + + + K + W QT T TGRLS
Sbjct: 522 VLQDLHPLPKIILEYRQVHKIKSTFVDGLLACLK------KGFISSTWNQTGTVTGRLSA 575
Query: 1887 EEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+ PN+Q + +H ++ ++ G EV I+ R F+ S + LAAD+SQIELR
Sbjct: 576 KHPNIQGISKHPIQI-TKPQNFKGKEDEV--LTISPRTMFV-SAKGHTFLAADFSQIELR 631
Query: 1946 LMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
++AH S DP L+ L +P DVF+ + ++W + V +R+QTK+++Y ++YG G
Sbjct: 632 ILAHLSGDPELLKLFQEPERDDVFSTLTSQWKDIPMEHVKHADREQTKKVVYSVIYGAGK 691
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
L+ L + EA + ++SF + + + ++ CHQ GYV S+ GR+R L +I
Sbjct: 692 KRLAACLGVTVQEAAQFLESFLQKYTKIKDFAQATIAQCHQTGYVASIMGRRRPLPRIHA 751
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N K +++A+RQAVN + QGSAAD+ K+AMI+I + + +L A R
Sbjct: 752 RNQKLRAQAERQAVNFVVQGSAADLCKLAMIHIFAAVACS-----PTLTA---------R 797
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLVKIQVGSTWGSLE 2177
L+ Q+HDEL+ EV+ + E +LV+ MES AL L VPL V + G WG L
Sbjct: 798 LVAQIHDELLFEVEGPQVPEFAALVRATMESLQHVQALELRLQVPLRVSLSAGHEWGCLA 857
Query: 2178 PFQ 2180
P Q
Sbjct: 858 PLQ 860
>gi|3063701|emb|CAA18592.1| putative protein [Arabidopsis thaliana]
gi|7270173|emb|CAB79986.1| putative protein [Arabidopsis thaliana]
Length = 671
Score = 253 bits (647), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 198/549 (36%), Positives = 294/549 (53%), Gaps = 48/549 (8%)
Query: 1 MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDG 60
M S S ++RIDQFY SKKRK +SP++KSGR EK+ K+T E SP KGTLD+YLK S DD
Sbjct: 149 MDSDSSKSRIDQFYVSKKRKHQSPNLKSGRNEKNVKVTGERSPGDKGTLDSYLKASLDDK 208
Query: 61 HTSKQSLLSRHEVVKRNLSLEIDKYSKDEKNQALLSDQAQPQATQKVISRCSSKEGNSE- 119
T+ L +R E R L LE+ S + L ++ + + S++ + E
Sbjct: 209 STTNSGLQARQEAFTRKLDLEVSASSVGQNIHPCLPKPVSFATFKECLGQNGSQDLHKEG 268
Query: 120 --VGCHMKDG--SAHIPESLELKQFPTDFLSLYCSEIHSSASSPSEAKLKDHKRHSSPSL 175
H DG A+ ++ EL+ F T FLSLYCS + S SP K + KR SS S
Sbjct: 269 VAAETHATDGLLCANQKDNSELRDFATSFLSLYCSGVQSVVGSPPHQKENELKRRSSSSS 328
Query: 176 LGGEDNKIAKKKYCVSNLLQSGEQTTCSNAKNIEETQSGFIVKTGNLVPNSSQRVTD--- 232
L +D +I+ K+ C S + S + T N ++ + + GN N + V+D
Sbjct: 329 L-AQDIQISHKRRCESENIPSLDDLT-----NPLGSKPESLARNGN---NRDKPVSDPTK 379
Query: 233 ---SNASLLLQASLRKCDKSSKSTLNTTACYTPEPSIVKTYVRETPKSTCGNSIFSPGEA 289
SN S+ + LRKC K+ +S+ + T +TP S +K+ TPKS CG+S+FSPGEA
Sbjct: 380 KMPSNESVEIPMGLRKCSKAPESSAHLTEFHTPG-SAIKSCPVGTPKSGCGSSMFSPGEA 438
Query: 290 FWNEAIEIADGFFAHTDIGPSQIAEGIADSKSQNE---INNSYNLRNKNYNKSKEMLNEG 346
FWNEAI++ADG + G ++K +++ I + +K K + L+
Sbjct: 439 FWNEAIQVADGLTIPIE------NFGSVEAKVRDQHVTILSCSKKTDKCTEKLERSLDLD 492
Query: 347 DSKVQHIKAGGSLKQMGKDVIDSVKELSPLPIKHLDFLFEDKNLK-GTKPGCGAADTSEA 405
+ +V+ A G K + K D KE+ LP+K+L+ LF+DKN+ G + C + D +
Sbjct: 493 EIRVKDKDAIGFSKVVEKHGRDFNKEVYQLPVKNLELLFQDKNINGGIQERCASFDQNN- 551
Query: 406 MMFRDGVVSEKGSVTHKSCQKIKFKCHHDNTSRTEGI----SDVQEKDSVLIVHERKLDI 461
+ +SE V +K C+ + +N +G+ E VL+ E +
Sbjct: 552 ITLGSSRISESAFVGNKGCENLDIA---NNAQADKGLIGKMYPEPEGKKVLLCEENR--- 605
Query: 462 SSQGIDSITSDSPTNVIKKPVGNEKSDEAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRG 521
G+ S+ S + ++KPVG+ +S+E+ TPSSS D L LS+WLPSE+CS+Y K+G
Sbjct: 606 ---GVRSV---SMISNMRKPVGSSESEESHTPSSSHRNYDGLSLSTWLPSEVCSVYNKKG 659
Query: 522 ISKLYPWQV 530
ISKLYPWQV
Sbjct: 660 ISKLYPWQV 668
>gi|348520205|ref|XP_003447619.1| PREDICTED: DNA polymerase nu-like [Oreochromis niloticus]
Length = 998
Score = 253 bits (647), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 182/582 (31%), Positives = 289/582 (49%), Gaps = 54/582 (9%)
Query: 1609 IQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDER 1668
+QVL + + + + +L+ T L S+ ++ H++D + W+L P D
Sbjct: 445 LQVLSRSQLVV-CYKAKDLLRTVLQFYRQDLSWKQVAGCHIQDPQ---VSGWLLDPTDPS 500
Query: 1669 SSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVS 1728
S +L + KR + A A + + +G C LCS L S
Sbjct: 501 SCYQDLLHKYCKRPQTLPALGAQKVSQ--------IISGLCWLYRLNMKLCSELH----S 548
Query: 1729 EELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFS 1788
+ L + ++E+ ++ VLA ME I VD E + +LL K++ LE++A+ AG F
Sbjct: 549 QGLWQLYSDMELNMIPVLAAMESHRIHVDKEALKRTSDLLGTKMKQLEQEAHRAAGQIFL 608
Query: 1789 LYTAADIANVLYGHLKL-------PIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEH 1841
L + + VL+ L L +P+ GKQ ST + L L+ HP+ +I ++
Sbjct: 609 LTSNTQLRTVLFEKLHLHERCENKKLPK--TVGKQQQSTSEAALLQLQDLHPLPKIILDY 666
Query: 1842 RTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFK 1901
R + K+ + + I S M ++ Y + W TS TGR+S + PN Q +
Sbjct: 667 RQVHKIKSTFIDGILS----CMMSKNY-ISSTWHLTSVVTGRISAKHPNFQALPRQPLQI 721
Query: 1902 MSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLS 1961
+ I G EV ++ R FIP QE W LAAD+ Q+ELRL+AH S DP L+ + +
Sbjct: 722 TKKQYIQGKEEEV--VTVHPRAMFIP-QEGWTFLAADFCQVELRLLAHLSSDPELLRIFT 778
Query: 1962 KPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEK 2021
P DVFTM+A++W G SE V S++R+ KR++Y ++YG G LS L SS +A +
Sbjct: 779 NPQADVFTMLASQWKGLSEKEVTSEDREHAKRVVYSVVYGAGRERLSGILGVSSEQASQF 838
Query: 2022 IKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSI 2081
F ++ + ++ + H++GYV S+ GR+R L I + + +A+RQAVN +
Sbjct: 839 QDRFLQTYRDIQGFIQRTIQQSHKQGYVLSIMGRRRNLPNINSPDWGIRMQAERQAVNFV 898
Query: 2082 CQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSV 2141
QGSAAD+ K+AMI I +++ RL+ Q+HDEL+ EV S
Sbjct: 899 VQGSAADLCKMAMIRIFNLVS--------------SSSSLSARLIAQLHDELLYEVKDSQ 944
Query: 2142 IKEAVSLVQKCMES-------AALLLVPLLVKIQVGSTWGSL 2176
+++ +LV+ MES L VPL V + G +WGS+
Sbjct: 945 VQQFAALVRSTMESLQHIDHLGVHLKVPLKVAVSSGKSWGSM 986
>gi|348571730|ref|XP_003471648.1| PREDICTED: DNA polymerase nu-like [Cavia porcellus]
Length = 858
Score = 253 bits (646), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 283/552 (51%), Gaps = 61/552 (11%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNL-----EKEVKKRLSSEAAAAANRSGRWKNQMRRAAHN 1706
G+D I +W++ P D S +L EK ++SS N S NQ R N
Sbjct: 345 GLDPRIAAWLIDPSDAVPSFEDLVAKHHEKSSTVKVSS---TCGNSSRNCVNQNVRVNLN 401
Query: 1707 GCCRRVAQTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGC 1761
R T LCS L W+L + +E+PLV VLA ME I V+ E
Sbjct: 402 ILYRL---TMDLCSKLKANGLWQLFCT---------LELPLVPVLAVMENNKIQVNREEM 449
Query: 1762 LQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKL----PIPEGHNKGKQ- 1816
+ LL +L+ LE++A+ +AG +F + + + +L+G LKL P G Q
Sbjct: 450 ERMSVLLGARLKELEQEAHFVAGEQFLIMSNNQLRKILFGKLKLHLLNPRKTLPRPGTQR 509
Query: 1817 HPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQ 1876
HPST + L+ L+ HP+ +I E+R + K+ + + + + + K ++ W Q
Sbjct: 510 HPSTSEAVLNSLQDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTWNQ 563
Query: 1877 TSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLA 1936
T T TGRLS + PN+Q + +++ + G E I+ RD F+ S+ + LA
Sbjct: 564 TGTVTGRLSAKHPNIQGISKQ-PIQITTPQKFQGK-EDKILMISPRDLFVSSKGH-TFLA 620
Query: 1937 ADYSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTKRLI 1995
AD+SQIELR++AH S DP L+ L + DVF+ + ++W + V R+QTK+++
Sbjct: 621 ADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKNIPVEHVTPVHREQTKKVV 680
Query: 1996 YGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGR 2055
Y ++YG G L+ L + EA + ++SF + + + A++ CHQKGYV S+ GR
Sbjct: 681 YSVVYGAGKERLATCLGVTVQEATQFLESFLQKYKKIKDFAQAAIAQCHQKGYVASIMGR 740
Query: 2056 KRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAAN 2115
+R L +I + + +++A+RQAVN + QGSAAD+ K+AMI I + I S+L A
Sbjct: 741 RRPLPRIHTQDPQLRAQAERQAVNFMVQGSAADLCKMAMIRIFTAIA-----TSSTLTA- 794
Query: 2116 FQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA-------LLLVPLLVKIQ 2168
RL Q+HDEL+ EV+ S + E LV+ MES L VPL V +
Sbjct: 795 --------RLTAQIHDELLFEVEDSQVPEFAVLVRDTMESLQHHWSPELQLQVPLKVSLS 846
Query: 2169 VGSTWGSLEPFQ 2180
G +WG L P Q
Sbjct: 847 TGRSWGCLAPLQ 858
>gi|224372423|ref|YP_002606795.1| DNA polymerase I [Nautilia profundicola AmH]
gi|223590027|gb|ACM93763.1| DNA polymerase I [Nautilia profundicola AmH]
Length = 872
Score = 253 bits (645), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 220/753 (29%), Positives = 342/753 (45%), Gaps = 135/753 (17%)
Query: 1432 NVNASEIKIPDTTLSVQLGKNAIGTITSNRDLDL-EVQDRPNRDPCLVNKDRACNKGPIN 1490
N+N E K P+ +++ I DLD+ + +R +D V N+ +
Sbjct: 248 NINLEEFKYPEINPILKVADKLI-------DLDITSILERVKKDGLYVKTKMPDNQVKFD 300
Query: 1491 AINASGGFDCF--LDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNL 1548
A+ + F +D+ E FD D N I G + +E + YYV +
Sbjct: 301 AVLIENEKELFEIIDKIEDKI-VAFDTETDSLENPN------IVGFSFAYEKNKAYYVPI 353
Query: 1549 PKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQ 1608
+ F + G +D+ PE K K I +I++K+ + N+K
Sbjct: 354 -----------NHFYL-GVTDQ---IPE------KTALKAIQKILDKKVI---GHNLKFD 389
Query: 1609 IQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDER 1668
++LK + I +P D I++WIL PD
Sbjct: 390 FKMLKKYGLEIP------------------------TP-----HADTMILAWILDPD--- 417
Query: 1669 SSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVS 1728
S L+ K+ L + G+ KN + A AL S+ ++
Sbjct: 418 -SPVGLDSVAKRYLDHQNIKFKEVIGKRKNFSEVDIQEAA--KYAAEDALISLKLYEILK 474
Query: 1729 EELIEA----LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
E+L E + NIE+P +N+L D+E GI +D+E + + +KL L ++ Y AG
Sbjct: 475 EKLWEEVKWDIENIEMPFINLLIDIESQGIKLDIEYMQKLQTETTEKLENLTQEIYRYAG 534
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTL 1844
+F++ + +A++L+ LKLP+ K K STD+ L L+ HPI+ + E+R L
Sbjct: 535 SEFNIKSTKQLAHILFEVLKLPV---KRKTKTGYSTDEKVLTSLKGTHPIIEKLLEYRKL 591
Query: 1845 AKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN 1904
KLL+ + + A+ + + YT ++LQT TATGRLS + PNLQ + +
Sbjct: 592 DKLLSTYIIPLQEYAKKDPNHKIYT---NFLQTGTATGRLSSKNPNLQNIPTSTD----- 643
Query: 1905 EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
IN RD F+ +E ++ DYSQIELRL+AHFSKD LI +
Sbjct: 644 --------------INIRDAFVAEKE---FVSLDYSQIELRLLAHFSKDEHLINAFLE-D 685
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
D+ A + G + + R K + +G++YGMGP LSE +N S+ EAKE I+
Sbjct: 686 KDIHLETAVKIFGENR---AKEYRPVAKSINFGLIYGMGPKKLSETINVSTKEAKEFIEK 742
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
+ +SFP V ++L +KGYVE+L R+RF N + + +R+AVN+I QG
Sbjct: 743 YFASFPTVKTFLENTKIEAREKGYVETLLKRRRFFD-FAAANARTLANFEREAVNTIFQG 801
Query: 2085 SAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKE 2144
SAADIIK AMI I + ++LLQ+HDEL+ E+D ++
Sbjct: 802 SAADIIKKAMIEIKQRF-------------------PKAKMLLQIHDELIFEIDS---RD 839
Query: 2145 AVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+K M++ L VPL V I G WG L+
Sbjct: 840 EAYEYKKIMQNVFKLEVPLKVGISFGKRWGELK 872
>gi|337287066|ref|YP_004626539.1| DNA polymerase I [Thermodesulfatator indicus DSM 15286]
gi|335359894|gb|AEH45575.1| DNA polymerase I [Thermodesulfatator indicus DSM 15286]
Length = 903
Score = 253 bits (645), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 240/467 (51%), Gaps = 39/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
C T L W L E L + I+ PL+ VLA ME+ GI +D
Sbjct: 472 ACEDAHVTYLLYQYFWPKLKEESLWKVFTEIDRPLIEVLAHMEMVGIKIDTAYLRGLSRE 531
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+ +KL+ LE+K YTLAG KF++ ++ + +L+ LKLP + K + STD L+
Sbjct: 532 MAEKLKELEEKIYTLAGEKFNINSSKQLGQILFEKLKLPTVKKTPKKTAY-STDNEVLEE 590
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H + +I E+RTLAKL + + ++ + ++ + LH + QT TATGRLS
Sbjct: 591 LSAVHELPRLILEYRTLAKLKSTYVDALPKM----VNPETGRLHTSFNQTVTATGRLSSS 646
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ N + G + R F+P +E ++ L+ADYSQI+LR++
Sbjct: 647 DPNLQ-----------NIPVRGEEG------LKIRQAFVP-EEGFLFLSADYSQIDLRVL 688
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH+S D LI + D+ AA G + V + R K + +GI+YGM P L
Sbjct: 689 AHYSGDETLIKAFWQGE-DIHRRTAAEIFGIPPEEVTPEMRRMAKTINFGIVYGMSPYGL 747
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
+++L EAK I+ + +PGV ++ V+ +KGYVE+L GRKR L I N
Sbjct: 748 AKELKIGRREAKAFIERYFERYPGVKRYMEQIVAEAREKGYVETLFGRKRPLPDINSPNR 807
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+ A+R A+N+ QG+AADIIK+AMI IH I F+ R+LL
Sbjct: 808 TAREFAERTAINTPIQGTAADIIKLAMIKIHRI---------------FKEKGFGTRMLL 852
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
QVHDEL+ EV I+E +V++ ME L VPL V + +G W
Sbjct: 853 QVHDELLFEVPEKEIEEIQPIVRQIMEGVVELKVPLKVNLAIGKNWA 899
>gi|225181342|ref|ZP_03734786.1| DNA polymerase I [Dethiobacter alkaliphilus AHT 1]
gi|225167923|gb|EEG76730.1| DNA polymerase I [Dethiobacter alkaliphilus AHT 1]
Length = 878
Score = 252 bits (644), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 241/467 (51%), Gaps = 48/467 (10%)
Query: 1717 ALCSVLWKL--LVSEELIEALLN-----IEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
A L+ L L+ E+L EA L+ +E+PL LA ME G+ VD++ + +
Sbjct: 448 AAVRTLYDLYPLLDEKLKEASLDHLYEDLELPLAYTLARMERTGVAVDLQALDAMKTEFR 507
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
+++ LE++ Y+LAG +F+L + + +L+ L LP K K STD L+ L
Sbjct: 508 ERIGALEQEIYSLAGEEFNLNSPKQLGQILFDKLGLP---ALKKTKTGYSTDAKVLEELA 564
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
H +V I ++RTL K+L L + L ++ Q +H H+ QT TATGRLS EP
Sbjct: 565 PHHEVVAKILKYRTLIKILTTYLEGLSKL----VNEQTGRIHTHFNQTVTATGRLSSTEP 620
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + +E G R F+P ++ +LL+ADYSQIELR++AH
Sbjct: 621 NLQNIPIRLE---------EGR--------RVRRAFVPGKKGNLLLSADYSQIELRILAH 663
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
SKDP LI K D+ AA G + V + RD+ K + +GI+YG+ LS+
Sbjct: 664 VSKDPVLIDSFRKEE-DIHRRTAAEVFGVLPEDVTPELRDRAKAVNFGIVYGISDYGLSQ 722
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
QL EAKE I + PGV ++H V + GYV +L R+R+L I N +
Sbjct: 723 QLKIPRQEAKEYISRYFERLPGVRDFIHNVVEDAKKNGYVTTLLNRRRYLPDINAKNFNQ 782
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S A+R A+N+ QG+AADIIK+AM+ + + G +++LQV
Sbjct: 783 RSFAERTAMNTPIQGTAADIIKLAMLRVEEALAG----------------MDDVQMVLQV 826
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
HD+LV EV + LV+K MESA L VPL V ++ G W +
Sbjct: 827 HDDLVFEVKEESLINVARLVKKQMESALELAVPLTVDVKAGLNWAEM 873
>gi|390461075|ref|XP_002806721.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase nu-like [Callithrix
jacchus]
Length = 1242
Score = 252 bits (644), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 290/555 (52%), Gaps = 57/555 (10%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNL-EKEVKKRLSSEAAAAANRSGRWKNQMRRAA 1704
H+ D G+D I +W++ P D S +L EK K ++ + ++ S R N + +
Sbjct: 680 HVADFVGLDPRIAAWLIDPSDAAPSFEDLVEKYCDKSITVKVSSTYGNSSR--NIVNQNV 737
Query: 1705 HNGCCRRVAQTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
T LCS L W+L + +E+PL+ +LA ME I V+ E
Sbjct: 738 RENLKILYRLTMDLCSKLKDYGLWQLFCT---------LELPLIPILAVMESHTIQVNKE 788
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN----KGK 1815
+ +LL +L+ LE++A+ +AG +F + + + +L+G LKL + N G
Sbjct: 789 EMEKTSSLLGARLKELEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLLSPRNCFPRTGL 848
Query: 1816 Q-HPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHW 1874
Q +PST + L+ LR HP+ +I E+R + K+ + + + + + K ++ W
Sbjct: 849 QKYPSTSEAVLNALRDVHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTW 902
Query: 1875 LQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWI 1933
QT T TGRLS + PN+Q + +H ++ ++ G E+ I R F+ S+ +
Sbjct: 903 NQTGTVTGRLSAKHPNIQGISKHPIQI-TKPKNFKGKEDEI--LTICPRAMFVSSKGH-T 958
Query: 1934 LLAADYSQIELRLMAHFSKDPALIGLLSKPH-GDVFTMIAARWTGRSEDSVGSQERDQTK 1992
LAAD+SQIELR++AH S DP L+ L + DVF+ + ++W + V +R+QTK
Sbjct: 959 FLAADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDVPVEHVTHADREQTK 1018
Query: 1993 RLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESL 2052
+++Y ++YG G L+ L EA + ++SF + + + A++ CHQ GY+ S+
Sbjct: 1019 KVVYSVVYGAGKERLAACLGVPVQEAAQFLESFLQKYKKIKDFAQAAIAQCHQTGYMVSI 1078
Query: 2053 KGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSL 2112
GR+R L +I + + +++A+RQAVN + QGSAAD+ K+AMI + + + +L
Sbjct: 1079 MGRRRPLPRIHARDQQLQAQAERQAVNFVVQGSAADLCKLAMIRVFAAVAAS-----HTL 1133
Query: 2113 AANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES-------AALLLVPLLV 2165
A RL+ Q+HDEL+ EV+ S I E +LV++ MES L VPL V
Sbjct: 1134 TA---------RLVAQIHDELLFEVEDSQIPECAALVRRTMESLEQVQVLELQLQVPLKV 1184
Query: 2166 KIQVGSTWGSLEPFQ 2180
+ G +WG L P Q
Sbjct: 1185 SLSAGRSWGHLVPLQ 1199
>gi|359687343|ref|ZP_09257344.1| DNA polymerase I [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418751263|ref|ZP_13307549.1| DNA-directed DNA polymerase [Leptospira licerasiae str. MMD4847]
gi|418756194|ref|ZP_13312382.1| 5'-3' exonuclease, N-terminal resolvase-like domain / 5'-3'
exonuclease, SAM domain / 3'-5' exonuclease /
DNA-directed DNA polymerase multi-domain protein
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384115865|gb|EIE02122.1| 5'-3' exonuclease, N-terminal resolvase-like domain / 5'-3'
exonuclease, SAM domain / 3'-5' exonuclease /
DNA-directed DNA polymerase multi-domain protein
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404273866|gb|EJZ41186.1| DNA-directed DNA polymerase [Leptospira licerasiae str. MMD4847]
Length = 920
Score = 252 bits (644), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 211/758 (27%), Positives = 348/758 (45%), Gaps = 107/758 (14%)
Query: 1429 VEFNVNASEIKIPD--TTLSVQLGKNAIGTITSNRDLDLEV-----QDRPNRDPCLVNKD 1481
++ +N ++K+PD + ++ KN G +RDL V +D P P K
Sbjct: 253 LDLGINEDDLKLPDYASDEGIRYLKNQ-GYNVLSRDLAKSVGKEPPKDEPEEGPAGSAKA 311
Query: 1482 RACNKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLF--EIHGLAVCWE 1539
KG + + W+ + D +E S F E+ G+++C +
Sbjct: 312 SNAKKGIYKRVESVEELTKLARAWKKSPILSVD------TETTSQYAFDAELLGISLCNQ 365
Query: 1540 NSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVR 1599
+Y+ + H ++ F ++K+ L P Q+ I +G ++ ++
Sbjct: 366 EGTGFYIPVT------HNQEGLF-----TNKDQLLPLDQVREI------LGPVLADPNIP 408
Query: 1600 KFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVS 1659
K N+K + VL++ I N+V D IV+
Sbjct: 409 KVGQNIKYDLIVLQNHGFEIA-----NIV------------------------FDTMIVA 439
Query: 1660 WILWPDDERSSNPNLEKEVKKRLSSEAA----AAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
+IL P+ R + +L +++ + A N+ W+ ++ + A T
Sbjct: 440 YILAPESRRFNMDDLAEDLLNYKTITYAELVGTGKNKKNLWEVELDKVAEY-AAEDADIT 498
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
L +VL K L L I++PL+ VL ME GI VD + + Q++++ L
Sbjct: 499 LRLYNVLRKSLKQSGLESVFKEIDLPLIPVLTQMEKAGIAVDAKYFAELSKDFQREVKDL 558
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
EK Y AG +F++ + ++ +L+ L+L + + G STD L+ L EHPI+
Sbjct: 559 EKGIYRAAGKEFNIASTKELQKILFDELQLRVVKKTQTGY---STDHEVLEELLGEHPII 615
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
+ ++R KL++ + ++ S+A S + +H + T ATGRLS +PNLQ
Sbjct: 616 EKLLDYRKYTKLISTYVDTLPSMA----SPKDGRIHTSYNMTIAATGRLSSTDPNLQ--- 668
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
N I + R FI +++ +L+ DYSQIELR+MAH SKDPA
Sbjct: 669 --------NIPIREKEGRL------IRKGFISGHKDFEILSLDYSQIELRIMAHISKDPA 714
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
++ K D+ AA G +ED V + RD+ K + + ++YG+ P LS L S
Sbjct: 715 MMDAYKKGI-DIHKRTAAAIYGVAEDKVTPEMRDKAKVVNFSVIYGVTPYGLSRNLRISR 773
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
EAK I + + +PGV ++ ++ C +KGYVE++KGR+R + I + + K A+R
Sbjct: 774 EEAKNFIDRYLTQYPGVQKYMDDMIAFCEEKGYVETMKGRRRPVPDITSTHRQAKEGAKR 833
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+ AD+IKIAMI I I + K + +LLLQVHDELV
Sbjct: 834 VAINTPIQGTCADMIKIAMIQIQDEI---------------EKRKWKSKLLLQVHDELVF 878
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EV S E + + +K ME+A L VP+ V+ + G W
Sbjct: 879 EVYKSEKDEFLKVCKKLMENALPLDVPIKVEGKFGQNW 916
>gi|403287006|ref|XP_003934753.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase nu [Saimiri
boliviensis boliviensis]
Length = 810
Score = 251 bits (642), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/567 (31%), Positives = 298/567 (52%), Gaps = 58/567 (10%)
Query: 1638 GSSFLL-LSPVHLKD--GIDMCIVSWILWPDDERSSNPNL-EKEVKKRLSSEAAAAANRS 1693
GS+ L L +H+ D G+D I +W++ P D S +L EK K ++ + ++ S
Sbjct: 237 GSTLLQDLKQLHIADFVGLDPRIAAWLIDPSDAAPSFEDLVEKYCDKSITVKVSSTYGNS 296
Query: 1694 GRWKNQMRRAAHNGCCRRVAQTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLAD 1748
R N + + T LC+ L W+L + +E+PL+ +LA
Sbjct: 297 SR--NIVNQNIRENLKILYRLTMDLCAKLKDYGLWQLFCT---------LELPLIPILAV 345
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPI- 1807
ME I V+ E + +LL +L+ LE++A+ +AG +F + + + +L+G LKL +
Sbjct: 346 MESHPIQVNKEEMEKTSSLLGARLKELEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLL 405
Query: 1808 -PEGHNKG---KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISM 1863
P G +++PST + L+ LR HP+ +I E+R + K+ + + + + +
Sbjct: 406 SPRNSFPGTGLQKYPSTSEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK--- 462
Query: 1864 STQKYTLHGHWLQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
K ++ W QT T TGRLS + PN+Q + +H ++ ++ G E+ I+ R
Sbjct: 463 ---KGSISSTWNQTGTVTGRLSAKHPNIQGISKHPIQI-TKPKNFKGKEDEI--LTISPR 516
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSED 1981
F+ S+ + LAAD+SQIELR++AH S DP L+ L + DVF+ + ++W +
Sbjct: 517 AMFVSSRGH-TFLAADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDVPVE 575
Query: 1982 SVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVS 2041
V +R+QTK+++Y ++YG G L+ L EA + ++SF + + + A++
Sbjct: 576 HVTHADREQTKKVVYSVVYGAGKERLAACLGVPVQEAAQFLESFLQKYKKIKDFAQAAIA 635
Query: 2042 SCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSII 2101
CHQ G + S+ GR+R L +I + + +++A+RQAVN + QGSAAD+ K+AMI + + +
Sbjct: 636 QCHQTGCMVSIMGRRRPLPRIHARDQQLRAQAERQAVNFVVQGSAADLCKLAMIRVFAAV 695
Query: 2102 VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES------ 2155
+L A RL+ Q+HDEL+ EV+ S I E +L+++ MES
Sbjct: 696 AAS-----RTLTA---------RLVAQIHDELLFEVEDSQIPECAALLRRTMESLEQVQV 741
Query: 2156 -AALLLVPLLVKIQVGSTWGSLEPFQA 2181
L VPL V + G +WG L P QA
Sbjct: 742 LELQLQVPLKVSLSAGHSWGHLVPLQA 768
>gi|440804287|gb|ELR25164.1| DNA polymerase I domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1138
Score = 251 bits (642), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 251/488 (51%), Gaps = 49/488 (10%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L + L L E+L + E+PL ++A + + +Q +LR +E+
Sbjct: 677 LMTNLEARLEKEDLYRVFRDQEMPLATIIA---------------KHQQAIQHRLRSIEE 721
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNK--GKQHPSTDKHCLDLLRHEHPIV 1835
A L G L + ++A+VL+ LKLP P K +QH +++K L L H HP+
Sbjct: 722 HARRLVGHSVCLSSPKEVAHVLFEELKLPTPRRSRKQLTEQHSTSEKVLLALKEH-HPLP 780
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
+I E+R KL+ + S A T + ++ W T TATGRLS+ EP L V
Sbjct: 781 ALILEYRHCQKLITTYILSFSKKA----ITGTHRIYASWQHTGTATGRLSVTEPPLSEV- 835
Query: 1896 HMVEFKMSNEDIYGGNAEV-DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
H VE + E + + + IN RD F+ + ++LL ADYSQ+E+R++AH S D
Sbjct: 836 HSVE--ATGEQPQPDDPSLQERIVINVRDAFV-APPGYVLLKADYSQMEMRILAHVSSDE 892
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+ + D+ +IAARW G+ D+V ERD+ KR++YGILYGMG TLSE LN
Sbjct: 893 FLMQFFHEGR-DIHKLIAARWLGKDPDAVDEVERDRAKRIVYGILYGMGARTLSEILNVD 951
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
EA++ I +F FP A +L S H+ G++ +L R+R I F KA+
Sbjct: 952 HTEAEQWISTFLEKFPKTAQFLKDTAESAHENGFIRTLLNRRRLFPTINF--EAYAHKAE 1009
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR---------- 2124
RQAVNS+ QG+AAD++K+AM++I +V + A KG+ +
Sbjct: 1010 RQAVNSVIQGTAADLVKLAMLSIDRALVAEEQRELVDAAVARGSTKGKEKADDVEQQLGE 1069
Query: 2125 -------LLLQVHDELVLEVDPSVIKEAVSLVQKCMESA--ALLLVPLLVKIQVGSTWGS 2175
L LQVHDELV EV ++ L+ +CMES L VPL V++ +G+ +G
Sbjct: 1070 SSRPIAALALQVHDELVYEVREDRVQWMEDLMVRCMESGLPIRLDVPLPVRLYLGTRYGH 1129
Query: 2176 LEPFQADN 2183
F A++
Sbjct: 1130 NNDFSAEH 1137
>gi|301762338|ref|XP_002916602.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase nu-like [Ailuropoda
melanoleuca]
Length = 1040
Score = 251 bits (642), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 179/560 (31%), Positives = 284/560 (50%), Gaps = 67/560 (11%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
G+D I +W++ P D + P+ E V K L S + N + ++ + +
Sbjct: 339 GLDPRIAAWLIDPGD---AAPSFEDLVAKYLESSISVKVNSTYGNSSRNVVNQNVRVNLK 395
Query: 1712 VAQ--TRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQA 1764
+ T LCS L W+L + +E+PL+ +LA ME I VD E +
Sbjct: 396 ILYRLTMGLCSQLKVYGLWQLFCT---------LELPLIPILAVMESHSIQVDREEMERT 446
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGH----NKGKQH-PS 1819
LL +L+ LE++A+ +AG +F + + + VL+G LKLP+ G Q PS
Sbjct: 447 SALLGSRLKELEQEAHFVAGEQFLITSNNQLREVLFGKLKLPLLSPRETLPRTGLQRLPS 506
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTST 1879
T + L L+ HP+ +I E+R + K + + + + R K ++ W QT T
Sbjct: 507 TSEAVLRALQDLHPLPKIILEYRRVHKTKSAFVDGLLACMR------KGSISSTWNQTGT 560
Query: 1880 ATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAAD 1938
TGRLS PN+Q + +H ++ ++ + G E I+ R F+ + E LAAD
Sbjct: 561 VTGRLSARHPNIQGISKHPIQ--ITKPQNFKG-VEGAMLTISPRSMFV-APEGHTFLAAD 616
Query: 1939 YSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYG 1997
+SQIELR++AH S DP L+ L + DVF+ + ++W G + V +R+QTK+++Y
Sbjct: 617 FSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKGVPPEHVTHADREQTKKVVYS 676
Query: 1998 ILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKR 2057
+YG G L+ L + EA ++SF + V ++ ++ CHQ GYV S+ GR+R
Sbjct: 677 AVYGAGKERLAACLGVTVQEAAWFLESFLQKYKKVKDFVQTTIAQCHQTGYVASIMGRRR 736
Query: 2058 FLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQ 2117
L +++ + + +++A+RQAVN + QGSAAD+ K+AMI + + + +L A
Sbjct: 737 PLPRVRAQDQQLRAQAERQAVNFVVQGSAADLCKMAMIRVFAAVAA-----SPTLTA--- 788
Query: 2118 MLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA----ALLL------------- 2160
RL+ Q+HDEL+ EVD S I E +LV+ MES AL L
Sbjct: 789 ------RLVAQIHDELLFEVDDSQIPELAALVRGTMESLRNVRALELQNRLTPREQDPEV 842
Query: 2161 VPLLVKIQVGSTWGSLEPFQ 2180
VPL V + G +WG L P Q
Sbjct: 843 VPLKVSLSAGHSWGHLVPLQ 862
>gi|333923229|ref|YP_004496809.1| DNA polymerase I [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333748790|gb|AEF93897.1| DNA polymerase I [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 882
Score = 250 bits (639), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 246/477 (51%), Gaps = 43/477 (9%)
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEA---LLNIEIPLVNVLADMELWGIGVDMEGCL 1762
NG A+ A+ + +L+ L E +E+PLV VLADME+ G+ VD +G
Sbjct: 446 NGEVSLAAKADAILKLAGELVKKLHLQEEDRLYFEVELPLVQVLADMEMAGVTVDKQGLK 505
Query: 1763 QARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDK 1822
+ L + L + +TLAG F++ + + ++L+ LKLP+ + K K STD
Sbjct: 506 EMSAELHDMIESLAHRIHTLAGEDFNINSPKQLGHILFEKLKLPV---YKKTKTGYSTDA 562
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATG 1882
L+ L EH IV +I E+R LAKL + + +L + Q LH + QT TATG
Sbjct: 563 EVLEKLAEEHEIVALILEYRQLAKLKSTYTDGLAAL----VDPQTGRLHSTFHQTVTATG 618
Query: 1883 RLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQI 1942
RLS EPNLQ + +E S I R F+P Q+ ++L ADYSQI
Sbjct: 619 RLSSAEPNLQNIPIRLE---SGRRI--------------RKVFVPRQKGNLILTADYSQI 661
Query: 1943 ELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGM 2002
ELR++AH S+DP+ + + D+ T AA G + V R + K + +GI+YG+
Sbjct: 662 ELRVLAHMSQDPSFLEAFRQGQ-DIHTRTAAEVFGVPMEEVTPDMRSRAKAVNFGIVYGI 720
Query: 2003 GPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKI 2062
L+ L S EAK I ++ + PGV ++ + GYV +L R+R+L +
Sbjct: 721 SDFGLARDLKVSRREAKSYIDNYFARCPGVKDYIDRVIKEAKHTGYVTTLLNRRRYLPDL 780
Query: 2063 KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR 2122
N +S +R A+N+ QGSAADIIK+AM+ + A + +
Sbjct: 781 FSPNYNARSFGERAAMNTPIQGSAADIIKLAMVRV---------------ARELRERNLQ 825
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+L+LQVHDEL+ +V S + E V LV+ CME+A L VPL+V +++G W ++P
Sbjct: 826 AKLVLQVHDELIFDVPESEVNELVDLVRDCMENALPLDVPLVVDVKLGPNWYEVKPI 882
>gi|323703153|ref|ZP_08114807.1| DNA polymerase I [Desulfotomaculum nigrificans DSM 574]
gi|323531930|gb|EGB21815.1| DNA polymerase I [Desulfotomaculum nigrificans DSM 574]
Length = 882
Score = 250 bits (639), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 246/477 (51%), Gaps = 43/477 (9%)
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEA---LLNIEIPLVNVLADMELWGIGVDMEGCL 1762
NG A+ A+ + +L+ L E +E+PLV VLADME+ G+ VD +G
Sbjct: 446 NGEVSLAAKADAILKLAGELVKKLHLQEEDRLYFEVELPLVQVLADMEMAGVTVDKQGLK 505
Query: 1763 QARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDK 1822
+ L + L + +TLAG F++ + + ++L+ LKLP+ + K K STD
Sbjct: 506 EMSAELHDMIESLAHRIHTLAGEDFNINSPKQLGHILFEKLKLPV---YKKTKTGYSTDA 562
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATG 1882
L+ L EH IV +I E+R LAKL + + +L + Q LH + QT TATG
Sbjct: 563 EVLEKLAEEHEIVALILEYRQLAKLKSTYTDGLAAL----VDPQTGRLHSTFHQTVTATG 618
Query: 1883 RLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQI 1942
RLS EPNLQ + +E S I R F+P Q+ ++L ADYSQI
Sbjct: 619 RLSSAEPNLQNIPIRLE---SGRRI--------------RKVFVPRQKGNLILTADYSQI 661
Query: 1943 ELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGM 2002
ELR++AH S+DP+ + + D+ T AA G + V R + K + +GI+YG+
Sbjct: 662 ELRVLAHMSQDPSFLEAFRQGQ-DIHTRTAAEVFGVPMEEVTPDMRSRAKAVNFGIVYGI 720
Query: 2003 GPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKI 2062
L+ L S EAK I ++ + PGV ++ + GYV +L R+R+L +
Sbjct: 721 SDFGLARDLKVSRREAKSYIDNYFARCPGVKDYIDRVIKEAKHTGYVTTLLNRRRYLPDL 780
Query: 2063 KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR 2122
N +S +R A+N+ QGSAADIIK+AM+ + A + +
Sbjct: 781 FSPNYNARSFGERAAMNTPIQGSAADIIKLAMVRV---------------ARELRERNLQ 825
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+L+LQVHDEL+ +V S + E V LV+ CME+A L VPL+V +++G W ++P
Sbjct: 826 AKLVLQVHDELIFDVPESEVNELVDLVRDCMENALPLDVPLVVDVKLGPNWYEVKPI 882
>gi|119602944|gb|EAW82538.1| polymerase (DNA directed) nu, isoform CRA_a [Homo sapiens]
Length = 891
Score = 250 bits (639), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 283/542 (52%), Gaps = 40/542 (7%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH 1705
H+ D G+D I +W++ P D + P+ E V+K N + + N R +
Sbjct: 340 HVADFIGLDPRIAAWLIDPSD---ATPSFEDLVEKYCEKSITVKVNST--YGNSSRNIVN 394
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
+ L L L L + +E+PL+ +LA ME I V+ E +
Sbjct: 395 QNVRENLKTLYRLTMDLCSKLKDYGLWQLFRTLELPLIPILAVMESHAIQVNKEEMEKTS 454
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG-----KQHPST 1820
LL +L+ LE++A+ +AG +F + + + +L+G LKL + N +++PST
Sbjct: 455 ALLGARLKELEQEAHFVAGERFLITSNNQLREILFGKLKLHLLSQRNSLPRTGLQKYPST 514
Query: 1821 DKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTA 1880
+ L+ LR HP+ +I E+R + K+ + + + + + K ++ W QT T
Sbjct: 515 SEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTWNQTGTV 568
Query: 1881 TGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADY 1939
TGRLS + PN+Q + +H ++ + ++ G ++ I+ R F+ S+ + LAAD+
Sbjct: 569 TGRLSAKHPNIQGISKHPIQI-TTPKNFKGKEDKI--LTISPRAMFVSSKGH-TFLAADF 624
Query: 1940 SQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGI 1998
SQIELR++ H S DP L+ L + DVF+ + ++W + V +R+QTK+++Y +
Sbjct: 625 SQIELRILTHLSGDPELLKLFQESERDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAV 684
Query: 1999 LYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF 2058
+YG G L+ L EA + ++SF + + + A++ CHQ G V S+ GR+R
Sbjct: 685 VYGAGKERLAACLGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRP 744
Query: 2059 LSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQM 2118
L +I + + +++A+RQAVN + QGSAAD+ K+AMI++ + + +L A
Sbjct: 745 LPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAAS-----HTLTA---- 795
Query: 2119 LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEP 2178
RL+ Q+HDEL+ EV+ I E +LV++ MES L VPL V + G +WG L P
Sbjct: 796 -----RLVAQIHDELLFEVEDPQIPECAALVRRTMES--LEQVPLKVSLSAGRSWGHLVP 848
Query: 2179 FQ 2180
Q
Sbjct: 849 LQ 850
>gi|312144078|ref|YP_003995524.1| DNA polymerase I [Halanaerobium hydrogeniformans]
gi|311904729|gb|ADQ15170.1| DNA polymerase I [Halanaerobium hydrogeniformans]
Length = 880
Score = 250 bits (638), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 244/464 (52%), Gaps = 40/464 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L +L K L + L + N+E+PL+ VLA ME G+ +D + Q + L+K+L + K
Sbjct: 453 LRDILIKKLKDDSLYDLFKNMELPLIKVLAQMEYNGVKIDKDWLQQLSDKLEKRLEIITK 512
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
KA+ LAG F+L + + +L+ L LP+ + G ST+ + L+ L +HPI+P+
Sbjct: 513 KAHELAGEDFNLNSPKQLGEILFEKLGLPVIKRTKTGY---STNANVLEKLEGKHPIIPL 569
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I E+R LAKL + + S+ L ++++ +H + Q TATGRLS PNLQ +
Sbjct: 570 ISEYRELAKLKSTYIDSLPPL----INSETGKIHTSFNQMVTATGRLSSTNPNLQNIPIR 625
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
E E+ R FIPS +N ILLA DYSQIELR+ AH S D L
Sbjct: 626 TE----------EGREI-------RKAFIPSSDNMILLAVDYSQIELRVFAHLSGDKRLK 668
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
+ D+ T A+ + V R K + +G+ YGM LS+ L+ E
Sbjct: 669 EAFNSGR-DIHTETASEIFEVEAEQVSPNLRRHAKVINFGLAYGMSAYGLSQDLDIPVEE 727
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
A++ I + F GV ++ + +KGY E+L GRKR++ +I N +S A+R A
Sbjct: 728 AQDYIDKYFERFSGVKKYMDETIQKVKEKGYAETLYGRKRYIPEINSSNYHRRSFAERSA 787
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+N+ QG+AADI+K +M++++ + D L N +LLQVHDELV EV
Sbjct: 788 INTPVQGTAADIMKKSMLDVYDSL------KDIDLEIN---------ILLQVHDELVFEV 832
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQA 2181
+++A L++ ME+AA L VPLLV +Q+ W E ++
Sbjct: 833 ANKDLEKAALLIKDKMEAAAELDVPLLVDLQIAENWRDKEDYEV 876
>gi|152976969|ref|YP_001376486.1| DNA polymerase I [Bacillus cytotoxicus NVH 391-98]
gi|152025721|gb|ABS23491.1| DNA polymerase I [Bacillus cytotoxicus NVH 391-98]
Length = 877
Score = 249 bits (637), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 189/587 (32%), Positives = 275/587 (46%), Gaps = 81/587 (13%)
Query: 1593 MEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDG 1652
++ ++RK+T++ K I LK V I+ G F
Sbjct: 362 LKDEEMRKYTFDAKRAIVALKWKGVEIR-----------------GVDF----------- 393
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRA--AHNGCCR 1710
D+ I +++L P D + K E A + + +RA A
Sbjct: 394 -DLLIAAYLLDPADTDKDFRTVAK------MKETHAVKSDEEVYGKGAKRAVPAQEIVAE 446
Query: 1711 RVAQTRALCSVLWKLLVSE----ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
VA+ + + + + E E E +N+E+PL VLADME+ G+ VD E +
Sbjct: 447 HVARKVHVLYDVKQTFIDELEKNEQYELFINLEMPLACVLADMEVKGVKVDTERLRNMGD 506
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
L +L+ +E++ Y LAG +F++ + + VL+ L LP+ + K K ST LD
Sbjct: 507 ELAGRLKEMEQEIYELAGTEFNINSPKQLGVVLFEKLNLPVIK---KTKTGYSTSADVLD 563
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L H I+P I +R L KL + + + + S +H + Q T TGRLS
Sbjct: 564 KLMDHHEIIPKILHYRQLGKLNSTYIEGLLKVVHDESSK----IHTRFNQVLTQTGRLSS 619
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
EPNLQ + +E + KI R FIPSQE W++ AADYSQIELR+
Sbjct: 620 TEPNLQNIPIRLE---------------EGRKI--RQAFIPSQEGWVMYAADYSQIELRV 662
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
+AH +KD LI D+ T A G +D V + R Q K + +GI+YG+
Sbjct: 663 LAHIAKDKGLIEAFQHDM-DIHTKTAMDVFGVEKDEVTANMRRQAKAVNFGIVYGISDYG 721
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
LS+ L + A E I+ + +SFPGV ++ V QKGYV +L R+R++ +I N
Sbjct: 722 LSQNLGITRKAAGEFIEKYFASFPGVKEYMDEIVQEAKQKGYVSTLLNRRRYIPEITSRN 781
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
+S A+R A+N+ QGSAADIIK AMI +A + + RLL
Sbjct: 782 FNVRSFAERTAMNTPIQGSAADIIKKAMI---------------VMADRLEEEGLQARLL 826
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LQVHDEL+ EV I++ LV + ME A L VPL V G TW
Sbjct: 827 LQVHDELIFEVPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|399052867|ref|ZP_10742074.1| DNA polymerase I [Brevibacillus sp. CF112]
gi|433545911|ref|ZP_20502252.1| DNA polymerase I [Brevibacillus agri BAB-2500]
gi|398049239|gb|EJL41670.1| DNA polymerase I [Brevibacillus sp. CF112]
gi|432182800|gb|ELK40360.1| DNA polymerase I [Brevibacillus agri BAB-2500]
Length = 883
Score = 249 bits (636), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 267/549 (48%), Gaps = 68/549 (12%)
Query: 1633 GLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLE----KEVKKRLSSEAAA 1688
GLE G SF D+ + S++L + SNP L+ + + R+ S+
Sbjct: 391 GLEANGISF------------DVYLASYLL---NASESNPTLDSIASQYAQVRVLSDEEV 435
Query: 1689 AANRSGRWKNQMRRAAHNGCCRRVAQTRAL----CSVLWKLLVSEELIEALLNIEIPLVN 1744
+ R +M + C VA A VL + L E++E L ++E PL
Sbjct: 436 YGKGAKRLVPEM-----DVLCEHVAHKAAAIWQSVPVLREQLAENEMVELLRDLEAPLSM 490
Query: 1745 VLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLK 1804
VLA ME G+ V+ E +Q L KKL L + Y LAG F++ + + +L+ L
Sbjct: 491 VLARMEKQGVKVNSERLVQMGEELDKKLADLTTQIYDLAGGPFNINSPKQLGEILFDKLA 550
Query: 1805 LPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMS 1864
LP+ + K K PST L+ L HPI+ I R L KL + + + +
Sbjct: 551 LPVIK---KTKTGPSTSADVLEKLAPYHPIIDAILNFRQLGKLRSTYIEGLTK----EIH 603
Query: 1865 TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDF 1924
T+ +H + Q +TATGRLS EPNLQ + +E + KI R+
Sbjct: 604 TKTSKVHTLYNQATTATGRLSSTEPNLQNIPIRME---------------EGRKI--REA 646
Query: 1925 FIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVG 1984
FIPS++ W +LAADYSQIELR++AH S D LI K D+ T A G SE V
Sbjct: 647 FIPSEDGWYMLAADYSQIELRILAHISGDENLIDAFRKGM-DIHTRTAMDVFGVSEGEVT 705
Query: 1985 SQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCH 2044
S R Q K + +GI+YG+ LS+ LN + EA E I+ + + F GV W+ V
Sbjct: 706 SLMRRQAKAVNFGIVYGISDYGLSQNLNITRKEAAEFIERYFAVFSGVKRWMDEIVQQAK 765
Query: 2045 QKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGG 2104
Q GYV +L R+R+L I+ N +S A+R A+N+ QG+AAD+IK+AMI +
Sbjct: 766 QDGYVTTLLHRRRYLPDIRSSNFNLRSFAERTAMNTPIQGTAADVIKLAMIRMQE----- 820
Query: 2105 VYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLL 2164
+ + R+LLQVHDELV EV + + LV + ME A L VPL
Sbjct: 821 ----------SLEQKGLSSRMLLQVHDELVFEVPENELAIMRKLVPEVMEGALALDVPLK 870
Query: 2165 VKIQVGSTW 2173
V + G +W
Sbjct: 871 VDVSDGRSW 879
>gi|333978063|ref|YP_004516008.1| DNA polymerase I [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821544|gb|AEG14207.1| DNA polymerase I [Desulfotomaculum kuznetsovii DSM 6115]
Length = 880
Score = 248 bits (634), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/464 (34%), Positives = 256/464 (55%), Gaps = 47/464 (10%)
Query: 1717 ALCSVLWKL--LVSEEL----IEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
A V+W+L L++E+L +E L +E+PLV VLADME+ G+ VD + + L+
Sbjct: 451 ARADVIWRLSELLAEKLRLAEMERLYYEVELPLVAVLADMEMTGVAVDKQYLEEMSRELE 510
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
KL + ++ Y LAG +F++ + + +L+ L+LP+ + K K STD L+ L
Sbjct: 511 IKLAAIAEQIYQLAGEQFNINSTRQLGYILFEKLELPVIK---KTKTSYSTDASVLEELA 567
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
HPIVP++ E+R L KL + + + +L ++ + LH + QT TATGRLS +P
Sbjct: 568 GAHPIVPLVLEYRQLMKLKSTYVDGLAAL----INPETGRLHTTFHQTVTATGRLSSSDP 623
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + +E + KI R FIP +E ++L ADYSQIELR++AH
Sbjct: 624 NLQNIPIRME---------------EGRKI--RRVFIPRREGNLILTADYSQIELRILAH 666
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
+ DP L+ + D+ T AA G + V + R + K + +GI+YG+ L+
Sbjct: 667 MAGDPNLLEAFRQGQ-DIHTRTAAEVFGVAITEVTADMRGRAKAVNFGIVYGISDFGLAR 725
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
+N S EA++ I+++ + + GV +++ + +KGYV +L R+R+L + N
Sbjct: 726 DINVSRQEARQYIENYFARYAGVKAFIERTIQQAREKGYVTTLLNRRRYLPDLFSANRNV 785
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+ +R A+N+ QGSAADIIK+AM+ IH + D LA R++LQV
Sbjct: 786 RMFGERTAINTPIQGSAADIIKLAMVRIHREL------KDRGLA---------TRMILQV 830
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDEL+ ++ + E LV++ ME+A +L VPL+V +++G W
Sbjct: 831 HDELIFDMPAGELPEVSELVRRHMENALVLDVPLVVDMKLGPNW 874
>gi|258406522|ref|YP_003199264.1| DNA polymerase I [Desulfohalobium retbaense DSM 5692]
gi|257798749|gb|ACV69686.1| DNA polymerase I [Desulfohalobium retbaense DSM 5692]
Length = 845
Score = 248 bits (634), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 248/480 (51%), Gaps = 45/480 (9%)
Query: 1695 RWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGI 1754
R +NQ+ N + R +L + L + EL+ + +IE+PLV VL ME G+
Sbjct: 408 RHQNQLETHPDNNALSIMETGR----ILRRELANSELLSLMQDIELPLVGVLVRMEKRGL 463
Query: 1755 GVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG 1814
+D+E + + +Q++L L + Y LAG +F+L ++ +A VL+G L+LP G
Sbjct: 464 AIDLEAFRRFLDEVQEELDGLTHEIYDLAGQEFNLRSSQQMAQVLFGDLELPT--GRKTP 521
Query: 1815 KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHW 1874
PST L+ LR+ HPI+P I RTL KL + L + ++ +++ LH H+
Sbjct: 522 GGVPSTSSQVLEGLRNVHPIIPKILRFRTLEKLRSTYLEPLPQ--KVDDTSR---LHTHF 576
Query: 1875 LQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWIL 1934
Q +TATGRLS PNLQ + EF + C F P E L
Sbjct: 577 NQLATATGRLSSSGPNLQNIPIRGEF----------GPRMRQC------FVAP--EGSRL 618
Query: 1935 LAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRL 1994
+AADYSQIELR++AH S+DP L+ ++ D+ + AA +++ V S+ R Q K +
Sbjct: 619 VAADYSQIELRVLAHLSQDPTLLEAFTQGE-DIHSRTAAVIMDIADEHVDSEARRQAKTI 677
Query: 1995 IYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKG 2054
+G+LYGMGP LS +L S NEAK I+ + GV+++ + Q GYV + G
Sbjct: 678 NFGLLYGMGPQKLSRELGISLNEAKTFIQRYFDRLQGVSAFYERIEDAAKQHGYVTTWAG 737
Query: 2055 RKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAA 2114
R+R L I N +A+R AVN++ QGSAADIIK+AMI D+ LA
Sbjct: 738 RRRLLPDINSRNANLAQQARRMAVNTVVQGSAADIIKMAMIEADG---------DTELA- 787
Query: 2115 NFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
RL LQVHDEL+LEV + A + M S A + VPL V VG+ W
Sbjct: 788 -----DAGARLTLQVHDELLLEVPREAAETAGKRLAAIMASVADMDVPLAVDWGVGTNWA 842
>gi|325286748|ref|YP_004262538.1| DNA polymerase I [Cellulophaga lytica DSM 7489]
gi|324322202|gb|ADY29667.1| DNA polymerase I [Cellulophaga lytica DSM 7489]
Length = 946
Score = 248 bits (634), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 194/664 (29%), Positives = 305/664 (45%), Gaps = 105/664 (15%)
Query: 1517 YDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPE 1576
+D + + + E+ G+A WE S +Y+ P+D +
Sbjct: 377 FDTETTGLNPLTAELVGIAFSWEASKGFYIPFPED-----------------------QD 413
Query: 1577 HQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLEN 1636
E+I+Q + E + K N+K I+VL+ + I+
Sbjct: 414 QAQELIEQ----LRPFFEDEKIEKIGQNLKYDIKVLRKYNLIIK---------------- 453
Query: 1637 VGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGR- 1695
G+ F D + +++ PD N++ + L+ + G+
Sbjct: 454 -GAYF------------DTMLAHYLINPDMRH----NMDVLAETYLNYTPISITELIGKK 496
Query: 1696 WKNQ--MRRAAHNGCCRRVAQTRALCSVL---WKLLVSEELIEALLN-IEIPLVNVLADM 1749
KNQ MR+ + + L +K + + E L N IEIPL++VLADM
Sbjct: 497 GKNQLSMRQVPIEKQTEYAVEDADITYQLASHFKPELKDAKTEELFNDIEIPLLSVLADM 556
Query: 1750 ELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPE 1809
EL GI +D++ L ++ LE Y AG +F++ + + +L+G LKL
Sbjct: 557 ELEGINLDVDFLNSLSEELNTDIKNLETSIYEAAGEEFNIASPKQLGEILFGKLKLVDKP 616
Query: 1810 GHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT 1869
K Q+ ST + L L +H I+ I E+R LAKL + + ++ ++ ST +
Sbjct: 617 KKTKTGQY-STAEDVLSYLAQDHEIIKNILEYRGLAKLKSTYIDALPD--QVEESTGR-- 671
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQ 1929
+H ++QT ATGRLS PNLQ + E R F+P
Sbjct: 672 VHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQ-----------------VRKAFVPRD 714
Query: 1930 ENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERD 1989
EN+ LLAADYSQIELR++A S + +I K D+ A++ D V ++R
Sbjct: 715 ENYTLLAADYSQIELRIIAALSDETTMIEAF-KNGEDIHASTASKVFNVPLDQVTREQRS 773
Query: 1990 QTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYV 2049
K + +GI+YG+ LS Q + S E+KE I ++ ++P + ++ V GYV
Sbjct: 774 NAKTVNFGIIYGVSAFGLSNQTDLSRGESKELIDAYYETYPKLKKYMSELVDFARDNGYV 833
Query: 2050 ESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPD 2109
+++ GR+R+L I N +S A+R AVN+ QGSAADIIKIAMINIH + GG +K
Sbjct: 834 QTVLGRRRYLKDINSRNAVVRSAAERNAVNAPIQGSAADIIKIAMINIHKKLTGGNFK-- 891
Query: 2110 SSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQV 2169
++LLQVHDELV + + ++E +L++ ME+A L VPL V+I
Sbjct: 892 -------------TKMLLQVHDELVFDAHKTELEEVRALIKTEMENAYSLAVPLDVEIGT 938
Query: 2170 GSTW 2173
G W
Sbjct: 939 GDNW 942
>gi|452990420|emb|CCQ98373.1| DNA polymerase I [Clostridium ultunense Esp]
Length = 894
Score = 248 bits (634), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 200/692 (28%), Positives = 319/692 (46%), Gaps = 131/692 (18%)
Query: 1498 FDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHR 1557
FD +D+ E+ F F ++ + S EI G+ + +S YY++ K+
Sbjct: 314 FDQIIDKIESEKSFCFKFLFEDENYIKS----EIIGVGIKVGDSVPYYIDCSKN------ 363
Query: 1558 RKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAV 1617
IK K+ + E +++ K+ MK+ I L +
Sbjct: 364 -----------------------DIKLFRKKFAKYFESKEIEKYGHMMKMDIFALLKLDI 400
Query: 1618 SIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKE 1677
I N+V D I ++L P SN ++ +
Sbjct: 401 DIN-----NMV------------------------FDTMIGQYLLNP---AQSNYSINEL 428
Query: 1678 VKKRLSSEAAAAANRSGRWKNQMR--------RAAHNGCCRRVAQTRALC----SVLWKL 1725
K+ L+ G+ KN+ R RA H VAQT L + +L
Sbjct: 429 GKEYLNIYGKDLEELLGKGKNKKRYKDLPVETRAEH------VAQTLDLIHGIREPINRL 482
Query: 1726 LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
+ +E+IE +E+PLV VLA+ME +G VD++ Q Q ++ L K+ YTLAG
Sbjct: 483 IEEQEMIELYYEVELPLVEVLANMEYYGFKVDLDVLNQLGEEFQGEIDSLTKEIYTLAGK 542
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLA 1845
+F++ + + +L+ L LP+ + K K STD LD L+ +H I+ I ++R +
Sbjct: 543 EFNINSPKQMGEILFDELNLPVIK---KTKTGYSTDAEVLDKLKGQHEIIEKILKYRQMV 599
Query: 1846 KLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNE 1905
KL + + + ++ + T K +H + QT T TGR+S EPNLQ + E
Sbjct: 600 KLKSTYIDGLINV--VDKETNK--IHSSFNQTVTNTGRISSTEPNLQNIPIKTE------ 649
Query: 1906 DIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG 1965
G R F+ EN+IL+ ADYSQIELR++AH SKDP L+ HG
Sbjct: 650 ---EGRM--------IRKAFVAEDENYILVDADYSQIELRVLAHISKDPKLMEAFY--HG 696
Query: 1966 -DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
D+ T AA +D V R++ K + +GI+YG+ LS+ LN EAKE I +
Sbjct: 697 EDIHTKTAAEVFHIPKDEVTPLMRNRAKAVNFGIVYGISDYGLSKDLNIPRKEAKEYIDN 756
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
+ ++ V ++ + +KGYVE++ R+R++ ++K N +S +R A+N+ QG
Sbjct: 757 YLKNYGMVKKYMEGIIKIGKEKGYVETILNRRRYVPELKSRNYNVRSFGERIAMNTPIQG 816
Query: 2085 SAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR---CRLLLQVHDELVLEVDPSV 2141
SAADIIK+AM+ + F+ L R RL+LQVHDEL++E
Sbjct: 817 SAADIIKVAMVKV------------------FKELNKRNLKSRLILQVHDELIIEAYKDE 858
Query: 2142 IKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++E +L++ ME++ L +PL V + G W
Sbjct: 859 VEEVKNLIKDIMENSIKLDIPLKVDLNTGDNW 890
>gi|112420958|ref|NP_861524.2| DNA polymerase nu [Homo sapiens]
gi|90101282|sp|Q7Z5Q5.2|DPOLN_HUMAN RecName: Full=DNA polymerase nu
gi|66268799|gb|AAY43130.1| polymerase (DNA directed) nu [Homo sapiens]
gi|119602945|gb|EAW82539.1| polymerase (DNA directed) nu, isoform CRA_b [Homo sapiens]
gi|148922010|gb|AAI46298.1| Polymerase (DNA directed) nu [synthetic construct]
gi|162319058|gb|AAI56717.1| Polymerase (DNA directed) nu [synthetic construct]
gi|162319324|gb|AAI56872.1| Polymerase (DNA directed) nu [synthetic construct]
gi|261858178|dbj|BAI45611.1| polymerase (DNA directed) nu [synthetic construct]
Length = 900
Score = 248 bits (633), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 285/549 (51%), Gaps = 45/549 (8%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH 1705
H+ D G+D I +W++ P D + P+ E V+K N + + N R +
Sbjct: 340 HVADFIGLDPRIAAWLIDPSD---ATPSFEDLVEKYCEKSITVKVNST--YGNSSRNIVN 394
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
+ L L L L + +E+PL+ +LA ME I V+ E +
Sbjct: 395 QNVRENLKTLYRLTMDLCSKLKDYGLWQLFRTLELPLIPILAVMESHAIQVNKEEMEKTS 454
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG-----KQHPST 1820
LL +L+ LE++A+ +AG +F + + + +L+G LKL + N +++PST
Sbjct: 455 ALLGARLKELEQEAHFVAGERFLITSNNQLREILFGKLKLHLLSQRNSLPRTGLQKYPST 514
Query: 1821 DKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTA 1880
+ L+ LR HP+ +I E+R + K+ + + + + + K ++ W QT T
Sbjct: 515 SEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTWNQTGTV 568
Query: 1881 TGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADY 1939
TGRLS + PN+Q + +H ++ + ++ G ++ I+ R F+ S+ + LAAD+
Sbjct: 569 TGRLSAKHPNIQGISKHPIQI-TTPKNFKGKEDKI--LTISPRAMFVSSKGH-TFLAADF 624
Query: 1940 SQIELRLMAHFSKDPALIGLLSKPH-GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGI 1998
SQIELR++ H S DP L+ L + DVF+ + ++W + V +R+QTK+++Y +
Sbjct: 625 SQIELRILTHLSGDPELLKLFQESERDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAV 684
Query: 1999 LYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF 2058
+YG G L+ L EA + ++SF + + + A++ CHQ G V S+ GR+R
Sbjct: 685 VYGAGKERLAACLGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRP 744
Query: 2059 LSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQM 2118
L +I + + +++A+RQAVN + QGSAAD+ K+AMI++ + + +L A
Sbjct: 745 LPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAAS-----HTLTA---- 795
Query: 2119 LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLVKIQVGS 2171
RL+ Q+HDEL+ EV+ I E +LV++ MES AL L VPL V + G
Sbjct: 796 -----RLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGR 850
Query: 2172 TWGSLEPFQ 2180
+WG L P Q
Sbjct: 851 SWGHLVPLQ 859
>gi|32306441|gb|AAN52116.1| DNA polymerase N [Homo sapiens]
Length = 900
Score = 248 bits (633), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 285/549 (51%), Gaps = 45/549 (8%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH 1705
H+ D G+D I +W++ P D + P+ E V+K N + + N R +
Sbjct: 340 HVADFIGLDPRIAAWLIDPSD---ATPSFEDLVEKYCEKSITVKVNST--YGNSSRNIVN 394
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
+ L L L L + +E+PL+ +LA ME I V+ E +
Sbjct: 395 QNVRENLKTLYRLTMDLCSKLKDYGLWQLFRTLELPLIPILAVMESHAIQVNKEEMEKTS 454
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG-----KQHPST 1820
LL +L+ LE++A+ +AG +F + + + +L+G LKL + N +++PST
Sbjct: 455 ALLGARLKELEQEAHFVAGERFLITSNNQLREILFGKLKLHLLSQRNSLPRTGLQKYPST 514
Query: 1821 DKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTA 1880
+ L+ LR HP+ +I E+R + K+ + + + + + K ++ W QT T
Sbjct: 515 SEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSTWNQTGTV 568
Query: 1881 TGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADY 1939
TGRLS + PN+Q + +H ++ + ++ G ++ I+ R F+ S+ + LAAD+
Sbjct: 569 TGRLSAKHPNIQGISKHPIQI-TTPKNFKGKEDKI--LTISPRAMFVSSKGH-TFLAADF 624
Query: 1940 SQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGI 1998
SQIELR++ H S DP L+ L + DVF+ + ++W + V +R+QTK+++Y +
Sbjct: 625 SQIELRILTHLSGDPELLKLFQESERDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAV 684
Query: 1999 LYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF 2058
+YG G L+ L EA + ++SF + + + A++ CHQ G V S+ GR+R
Sbjct: 685 VYGAGKERLAACLGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRP 744
Query: 2059 LSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQM 2118
L +I + + +++A+RQAVN + QGSAAD+ K+AMI++ + + +L A
Sbjct: 745 LPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAAS-----HTLTA---- 795
Query: 2119 LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLVKIQVGS 2171
RL+ Q+HDEL+ EV+ I E +LV++ MES AL L VPL V + G
Sbjct: 796 -----RLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGR 850
Query: 2172 TWGSLEPFQ 2180
+WG L P Q
Sbjct: 851 SWGHLVPLQ 859
>gi|87308014|ref|ZP_01090156.1| DNA polymerase I [Blastopirellula marina DSM 3645]
gi|87289096|gb|EAQ80988.1| DNA polymerase I [Blastopirellula marina DSM 3645]
Length = 880
Score = 248 bits (633), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 243/467 (52%), Gaps = 45/467 (9%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L +L + + +E L + L ++E+PL++VL +ME GI VD+E + +++ LE+
Sbjct: 453 LDPILSERIEAEGLGDLLTDVELPLIDVLVEMEFNGIRVDVERLNELSRQYGERMEVLER 512
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ Y LAG F++ + + VL+ L LP+ + K K PSTD L+ L +H +
Sbjct: 513 EIYQLAGRDFNINSPKQLGTVLFDELNLPVIK---KTKTGPSTDAEVLEQLAKQHDMPAK 569
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I + R AKL + ++ L + ++ +H + Q ATGRLS +PNLQ +
Sbjct: 570 IVQFRQYAKLKGTYVDALPVL----ICSKTDRVHTSFNQVVAATGRLSSNDPNLQNIP-- 623
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
+ + S E R FIP +W LL ADYSQIELR++AHFS DPAL+
Sbjct: 624 IRTQESRE---------------IRSAFIPGTPDWKLLCADYSQIELRVLAHFSGDPALM 668
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
K + D+ +A+ G D V S R K + +G++YG P L++ L+ +E
Sbjct: 669 ESYQK-NEDIHARVASEVYGVPLDQVTSTHRRSAKAINFGVVYGQSPFGLAKSLDIDKDE 727
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ--- 2074
A I ++ +PGV + + C + GYV ++ GR+R + ++ + +++ K Q
Sbjct: 728 AYGFIDAYFKRYPGVDVLMEQILVDCQRDGYVRTILGRRRAIDGVRTADKRDRLKRQLTM 787
Query: 2075 --RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
R A+N++ QGSAADIIK+AM+ +H + +LLLQ+HDE
Sbjct: 788 PERTAINTVIQGSAADIIKLAMLRVHR---------------RLEKEGSPAKLLLQIHDE 832
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
LV E P +++ LV++ MESA L +PL+V I+ G W EP
Sbjct: 833 LVFETPPEYLEQLAQLVREEMESARNLAIPLVVDIKSGDNWAQCEPL 879
>gi|260912940|ref|ZP_05919425.1| DNA-directed DNA polymerase I [Pasteurella dagmatis ATCC 43325]
gi|260632930|gb|EEX51096.1| DNA-directed DNA polymerase I [Pasteurella dagmatis ATCC 43325]
Length = 930
Score = 248 bits (633), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 286/555 (51%), Gaps = 61/555 (10%)
Query: 1634 LENVGSSFLLLSPVHLKDGI-------DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEA 1686
+E VG + + ++GI D ++S++L + + N++ K+ L +
Sbjct: 418 IEKVGQNIKYDLSIFARNGINVQGVTYDTMLLSYVL----DSTGRHNMDDLAKRYLGHQT 473
Query: 1687 AAAANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEE--LIEALLNI 1738
+ +G+ K Q+ A T L VLW+ VSE+ L++ +
Sbjct: 474 ISFEEIAGKGKGQLTFDQIPLEHATTYAAEDADITMKLQQVLWEK-VSEQPTLVKLYRTM 532
Query: 1739 EIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANV 1798
E+PL++VL+ ME G+ +D L N + ++L LE++AY LAG F+L + + +
Sbjct: 533 ELPLLSVLSRMERNGVLIDSNTLLTQSNKIAERLTALEQQAYELAGQTFNLASTKQLQEI 592
Query: 1799 LYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSL 1858
L+ L LP+ + KG PST++ L+ L ++H + ++ EHR L+KL + + +
Sbjct: 593 LFDKLGLPVLKKTPKGA--PSTNEEVLEELAYDHELPKLLVEHRGLSKLKSTYTDKLPQM 650
Query: 1859 ARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCK 1918
I+ T + +H + Q TATGRLS +PNLQ + + NE+ G
Sbjct: 651 --INKHTGR--VHTSYHQAVTATGRLSSSDPNLQNI------PIRNEE---GR------- 690
Query: 1919 INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGR 1978
R FIP +E + ++AADYSQIELR+MAH SKD LI S+ D+ AA G
Sbjct: 691 -RIRQAFIP-REGFTMVAADYSQIELRIMAHLSKDQGLINAFSEGK-DIHRSTAAEIFGL 747
Query: 1979 SEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHV 2038
+ V S++R K + +G++YGM LS QL N+A++ + + +PGV +++
Sbjct: 748 PLEQVTSEQRRSAKAINFGLIYGMSSFGLSRQLGIPRNDAQKYMDLYFQRYPGVQTFMTD 807
Query: 2039 AVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIH 2098
+ +GYV +L R+ +L I N + A+R A+N+ QG+AADIIK AMI++
Sbjct: 808 IRETAKAQGYVATLFDRRLYLPDINSSNAIRRKAAERVAINAPMQGTAADIIKRAMIDLD 867
Query: 2099 SIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAAL 2158
IVG PD ++++QVHDELV EV ++E L+++ ME AA
Sbjct: 868 KQIVGN---PD-------------IQMIMQVHDELVFEVRSEKVEEFSQLIKQTMEKAAQ 911
Query: 2159 LLVPLLVKIQVGSTW 2173
L+VPL+V + VG W
Sbjct: 912 LVVPLIVDVGVGQNW 926
>gi|345798133|ref|XP_545922.3| PREDICTED: DNA polymerase nu [Canis lupus familiaris]
Length = 888
Score = 248 bits (632), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 301/602 (50%), Gaps = 66/602 (10%)
Query: 1603 WNM---KVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVS 1659
W M KV Q LK + F + V T L + S+ + VH G+D I +
Sbjct: 241 WTMRDLKVLFQTLKCPVIC---FNAKDFVRTVLQIFGNEGSWKHV--VHFV-GLDPRIAA 294
Query: 1660 WILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQ--TRA 1717
W++ P + +S E V K L S + N + ++ + ++ T
Sbjct: 295 WLIDPGEAATS---FEDLVAKFLESSISVKVNSTYGNSSRNVVNQNVRVNLKILYRLTMG 351
Query: 1718 LCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
LCS L W+L + +E+PL+ +LA ME I V+ E + LL +L
Sbjct: 352 LCSQLKVYGLWQLFCT---------LELPLIPILAVMESHSIRVNREEMERTSALLGSRL 402
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKL----PIPEGHNKGKQH-PSTDKHCLDL 1827
+ LE++A+ +AG +F + + + +L+G LKL P+ G Q PST + L+
Sbjct: 403 KELEQEAHFVAGEQFLITSNNQLQEILFGKLKLHLMSPMETLPRTGLQRLPSTSEAVLNA 462
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ HP+ +I E+R + K + + + + R K ++ W QT T TGRLS
Sbjct: 463 LQDLHPLPKIILEYRRVHKTKSAFVDGLLAFVR------KGSISSMWNQTGTVTGRLSAR 516
Query: 1888 EPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
PN+Q + +H + K++ + G E I+ R F+ + E+ LAAD+SQIELR+
Sbjct: 517 HPNIQGISKHPI--KITKPQNFKGT-EGTMLTISPRSMFV-APESHTFLAADFSQIELRI 572
Query: 1947 MAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+AH S DP L+ L + DVF+ + ++W + V +R+QTK+++Y ++YG G
Sbjct: 573 LAHLSGDPELLKLFRESGRDDVFSTLTSQWKDIPPECVTYADREQTKKVVYSVVYGAGKE 632
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
L+ L + EA + ++SF + + ++ ++ CHQ GYV S+ GR+R L ++
Sbjct: 633 RLAACLGVTVQEAAQFLESFLQKYKKIKDFVQTTIAQCHQTGYVASIMGRRRPLPRVHDQ 692
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ + +++A+RQAVN + QGSAAD+ K+AMI I + +L A RL
Sbjct: 693 DQQLRAQAERQAVNFVVQGSAADLCKMAMIRIFRAVATS-----PTLTA---------RL 738
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAAL-------LLVPLLVKIQVGSTWGSLEP 2178
+ Q+HDEL+ EV+ S I E +LV+ MES L VPL V + G +WG L P
Sbjct: 739 VAQIHDELLFEVEDSQIPEFAALVRGTMESLQYVRALGLQLQVPLKVSLSAGPSWGHLVP 798
Query: 2179 FQ 2180
Q
Sbjct: 799 LQ 800
>gi|281417605|ref|ZP_06248625.1| DNA polymerase I [Clostridium thermocellum JW20]
gi|281409007|gb|EFB39265.1| DNA polymerase I [Clostridium thermocellum JW20]
Length = 894
Score = 248 bits (632), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 241/437 (55%), Gaps = 40/437 (9%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+PLV LADME +G V+++ ++ LQ+K+ + K+ YTLAG +F++ + +
Sbjct: 494 DIELPLVRTLADMEYYGFKVNVDALVEFSKELQEKIDVVTKEIYTLAGEEFNINSPKQLG 553
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L+ L LPI + K K STD L+ L H IV I E+R L KL + +
Sbjct: 554 VILFEKLGLPIIK---KTKTGYSTDAEVLEELSDRHEIVEKILEYRQLVKLKSTYAEGL- 609
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
LA I+ T K +H + QT TATGR+S EPNLQ + ++ +MS +
Sbjct: 610 -LAVINPYTGK--IHSSFNQTVTATGRISSTEPNLQNIP--IKLEMSRK----------- 653
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R FIPS EN++LL ADYSQIELR++AH + D +I + D+ T AA
Sbjct: 654 ----IRKVFIPSDENYLLLDADYSQIELRVLAHITNDENMINAFLN-NEDIHTSTAASVF 708
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G ++ V R + K + +GI+YG+G +L++ L S EA+ I + +P V ++
Sbjct: 709 GIPKEEVTPLMRSRAKAVNFGIVYGIGDFSLAKDLKISRKEARAYIDGYLDRYPNVKKYM 768
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
H V +KG+V ++ R+R+L ++K N +S +R A+N+ QGSAADIIKIAM+
Sbjct: 769 HDIVEEGKEKGFVTTMFMRRRYLPELKSRNFNIRSFGERVAMNTPIQGSAADIIKIAMVK 828
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
+H + K + RL+LQVHDEL++E +E ++ + M++A
Sbjct: 829 VH---------------GELKKRKLKSRLILQVHDELIVETFKDEKEEVEKILLEGMQNA 873
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L VPL+V+I+ GS W
Sbjct: 874 VSLKVPLVVEIKSGSNW 890
>gi|221632712|ref|YP_002521933.1| DNA polymerase I [Thermomicrobium roseum DSM 5159]
gi|221156104|gb|ACM05231.1| DNA polymerase I [Thermomicrobium roseum DSM 5159]
Length = 917
Score = 247 bits (631), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 244/494 (49%), Gaps = 40/494 (8%)
Query: 1694 GRWKNQ--MRRA----AHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLA 1747
GR K Q M RA C V T L VL L + + IE+PL++VL
Sbjct: 452 GRGKKQLTMDRAEIARVTQYACADVEATYRLVEVLRPQLEAHNQLRLFTEIELPLIDVLI 511
Query: 1748 DMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPI 1807
DME GI +D+ Q +L +L LE++ Y LAG F++ + ++ +L+ L LP
Sbjct: 512 DMEKAGIAIDVPYLEQLSIMLDGQLHALERRIYELAGHPFNINSPQQLSTLLFDELGLP- 570
Query: 1808 PEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQK 1867
+ K S + L+ LR HPIV I E+R L KL + + ++ + Q
Sbjct: 571 --RGKRTKTGYSVSQEVLENLRDTHPIVEAILEYRQLLKLKSTYVDALPR----QVHPQT 624
Query: 1868 YTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIP 1927
+H + QT ATGRLS +PNLQ + E ++ + + R +
Sbjct: 625 GRVHTIFHQTVAATGRLSSSDPNLQNIPARGELGLAVRRAFIADN---------RPGYRI 675
Query: 1928 SQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQE 1987
+ E +LL+ DYSQIELRLMAHFS+DPAL+ ++ D+ A+ G D+V +
Sbjct: 676 ADEPILLLSVDYSQIELRLMAHFSQDPALLRAFAE-GKDIHAATASEVFGVPLDAVTPEM 734
Query: 1988 RDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKG 2047
R K + +GI+YGM L+ S +A+ I+++ FPGVA +L + G
Sbjct: 735 RRIAKVVNFGIMYGMQAYGLARDTGMSRQDAQRFIEAYFQRFPGVARYLEETRRRAAELG 794
Query: 2048 YVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYK 2107
YVE+L GR+R+L +I N + A+R AVN QG+AADI+K+AMI +H +
Sbjct: 795 YVETLFGRRRYLPEITSSNPARRQAAERMAVNMPLQGTAADIMKLAMIAVHRALAE---- 850
Query: 2108 PDSSLAANFQMLKG-RCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVK 2166
+G R R+LLQVHDELVLEV S + LV M L VPL V
Sbjct: 851 ------------RGLRSRMLLQVHDELVLEVPESELATTTELVTTRMSRVVELSVPLEVD 898
Query: 2167 IQVGSTWGSLEPFQ 2180
+ G W LEP +
Sbjct: 899 AKAGPNWADLEPVR 912
>gi|229087143|ref|ZP_04219293.1| DNA polymerase I [Bacillus cereus Rock3-44]
gi|228696211|gb|EEL49046.1| DNA polymerase I [Bacillus cereus Rock3-44]
Length = 884
Score = 247 bits (631), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 190/583 (32%), Positives = 273/583 (46%), Gaps = 81/583 (13%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
D+RK+T++ K I LK V I+ G F D+
Sbjct: 373 DMRKYTFDAKRAIVALKWKDVEIK-----------------GIDF------------DLL 403
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGC-CRRVAQT 1715
I +++L P D + K + A ++ K R G VA+
Sbjct: 404 IAAYLLDPADTDKDFRAVAK-----MKETHAVKSDEEVYGKGAKRAVPEQGVVAEHVARK 458
Query: 1716 RALCSVLWKLLVSE----ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
+ + K V E E E +E+PL VLA+ME+ G+ VD E + L +
Sbjct: 459 VHVLFDVQKTFVEELEKNEQYELFTELEMPLARVLAEMEVKGVKVDTERLRNMGDELAGR 518
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E+K Y LAG +F++ + + VL+ +L LP+ + K K ST LD L +
Sbjct: 519 LKEMEQKIYELAGTEFNINSPKQLGVVLFENLNLPVIK---KTKTGYSTSADVLDKLMNH 575
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 576 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 631
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R FIPS E W++ AADYSQIELR++AH +
Sbjct: 632 QNIPIRLE---------------EGRKI--RQAFIPSTEGWVMYAADYSQIELRVLAHIA 674
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
KD L+ D+ T A G ED V S R Q K + +GI+YG+ LS+ L
Sbjct: 675 KDKGLVEAFQHDM-DIHTKTAMDVFGVGEDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 733
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + +SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 734 GITRKAAGEFIEKYFASFPGVKEYMDEIVQEAKQKGYVSTLLNRRRYIPEITSRNFNLRS 793
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKG-RCRLLLQVH 2130
A+R A+N+ QGSAADIIK AMI + AN +G + RLLLQVH
Sbjct: 794 FAERTAMNTPIQGSAADIIKKAMI----------------IMANRLEEEGLQARLLLQVH 837
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+ EV +++ LV + ME A L VPL V G TW
Sbjct: 838 DELIFEVPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSSGPTW 880
>gi|339242733|ref|XP_003377292.1| DNA polymerase I domain protein [Trichinella spiralis]
gi|316973920|gb|EFV57463.1| DNA polymerase I domain protein [Trichinella spiralis]
Length = 1661
Score = 247 bits (631), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 257/482 (53%), Gaps = 36/482 (7%)
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
C + A T L ++++L + L A LNIE+P V+ ++E GIG +++ C+ L
Sbjct: 1197 CFQSAATNVLYPKIFEILKKKNLWNAFLNIELPAQYVVGNIESAGIGFNVDLCMAMSTCL 1256
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGK------QHPSTDK 1822
+ KL LE +A AG +FSL + +++ VL+ L+LP P+ + + ST K
Sbjct: 1257 KNKLNELEAEAAKEAGHRFSLNSPKEVSKVLFYELQLPPPDESKVSRRRFTSVKQYSTAK 1316
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLAKLLNCTL-------GSICSLARISMSTQKYTLHGH-W 1874
H L+ L HP+ +I E R L+ L + +C+ STQ+ + + W
Sbjct: 1317 HVLENLAQLHPLPGIILEFRQLSAALTNYIYPLLRINRYLCTNCNCVFSTQERIIGKYDW 1376
Query: 1875 LQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWIL 1934
TATGRL M EPNLQ V +E I GN ++ R+ F+ S E L
Sbjct: 1377 Y---TATGRLIMHEPNLQIVPKFLE-------IPNGNN-----TLHIREIFVAS-EGCTL 1420
Query: 1935 LAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRL 1994
L+AD+SQ+ELR++AH S D LI +L K DVFT IAA+ +V +R++ K++
Sbjct: 1421 LSADFSQLELRILAHLSNDSKLIKIL-KEKIDVFTEIAAKMNSIDRSAVNEIQRNRAKQI 1479
Query: 1995 IYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKG 2054
Y ++YGM P +L+ +L +A + +FK FP V WL C +G+ +L
Sbjct: 1480 CYALIYGMCPKSLAAELGTDEEQAIQFYNNFKKLFPDVTRWLIETTEKCRSRGFCVTLAN 1539
Query: 2055 RKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAA 2114
R R+ + I+ +K A+RQA+N+ QGSA+DI KIA+ ++ + Y +
Sbjct: 1540 RVRYFAAIRSSATSDKLHAERQAINTTVQGSASDIFKIALRKVY--LALDDYTKKNGQMN 1597
Query: 2115 NFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
N Q L +++ Q+HDEL+LEV S ++ ++V+ ME+A L V L V+I+ G++WG
Sbjct: 1598 NAQTL---AKIIFQIHDELMLEVTNSNVEAVATIVKHSMETAVSLRVDLPVRIKHGNSWG 1654
Query: 2175 SL 2176
++
Sbjct: 1655 TM 1656
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 202/413 (48%), Gaps = 68/413 (16%)
Query: 921 TKGESMLICKPEEVKKIMGLLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQT----AE 976
T ES+LICK E+K+ L+ ++ + E+ + ++ + + G+++T
Sbjct: 3 TLRESILICKSNELKRAYELI------ANADMLENNSTLSVTAEKSSSWGLIRTLLENKA 56
Query: 977 DIHRYVRCTLLNSTKPFQDVVKSAQD----------SLRWLCHRKFLEWNEDTKLYSTTP 1026
+I ++ CTL + Q+ V ++++ L++L F+ ED L T
Sbjct: 57 EILFFLHCTL---SYARQEAVAASEELHKNSDLVESCLQYLQENDFISVTEDNIL--PTQ 111
Query: 1027 LGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPI----NVEVEPDWELYY 1082
LG A GSS+ P+E+L V DL +A+ VL +DLHLV TPI V+ W YY
Sbjct: 112 LGCATVGSSMSPDEALYVYKDLKKAKSALVLETDLHLV---TPIFLIEQVKHGISWTQYY 168
Query: 1083 ERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYRLGITSNN 1142
+ + L + + VG +G+ E YL+ A A LG +N
Sbjct: 169 DIWRNLESGQRRVGEMIGIQERYLVNKAASAT---------------------LGNVKHN 207
Query: 1143 MLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVF 1202
D + L++ R++VAL L LV+E P++ V + + RG +Q+LQ+ A +A MV F
Sbjct: 208 ---DHEKLQIYLRYFVALALYELVEEKPIMVVSKKYGFNRGFLQSLQQQAATYAGMVVAF 264
Query: 1203 CERLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEAS 1262
C+RLGW+ + L+ F R++FGV+ ++ EL I + G RAR ++ G+ T +A+
Sbjct: 265 CDRLGWFTFKTLLCGFSERLAFGVKRDLTELVQIDGIDGLRARRFHEDGITTIAKLAQMK 324
Query: 1263 ISEIVKAL-----FESSS-------WIAEAQRRVQLGVAKKIKNGARKIVLEK 1303
I EI K FESSS W+A A+ ++ AR ++ ++
Sbjct: 325 IREIAKVFSRAVPFESSSNGGEKSTWLAGHSELSLYDAAEFVRKQARCLLSDR 377
>gi|416892198|ref|ZP_11923628.1| DNA polymerase I [Aggregatibacter aphrophilus ATCC 33389]
gi|347814962|gb|EGY31606.1| DNA polymerase I [Aggregatibacter aphrophilus ATCC 33389]
Length = 502
Score = 247 bits (631), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 270/528 (51%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + + N++ K+ L + N +G+ KNQ+ A
Sbjct: 16 FDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTIGFENIAGKGKNQLTFNQIPLEQAGE 71
Query: 1707 GCCRRVAQTRALCSVLWKLLVSE-ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L VLW+ L S+ L+E +IE+PL+ VL+ ME G+ +D +
Sbjct: 72 YAAEDADVTMKLQQVLWEKLKSQPSLVELYQSIELPLLGVLSRMERCGVLIDSDALFLQS 131
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + ++L LE +A+ LAG F+L + + ++L+ L LP+ + KG PST++ L
Sbjct: 132 NEITERLTALEMQAHELAGQPFNLASTKQLQDILFDKLSLPVLQKTPKGA--PSTNEDVL 189
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + V+ EHR L+KL + + + ++ Q +H + Q TATGRLS
Sbjct: 190 EELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM----VNPQTGRVHTSYHQAVTATGRLS 245
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI +++ + ++AADYSQIELR
Sbjct: 246 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-ARDGYKIIAADYSQIELR 287
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI ++ D+ AA G + V S++R K + +G++YGM
Sbjct: 288 IMAHLSNDAGLINAFAQGK-DIHRSTAAEIFGLPLEQVTSEQRRNAKAINFGLIYGMSSF 346
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A+ + + +PGV +++H +GYVE+L GR+ +L +I
Sbjct: 347 GLSRQLGISRADAQRYMDLYFQRYPGVQTFMHDIREKAKAQGYVETLFGRRLYLPEINSS 406
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + I+ PD +
Sbjct: 407 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEIMRD---DPD-------------IHM 450
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV I L+++ ME+AA L+VPL+V + VG W
Sbjct: 451 IMQVHDELVFEVRSEKIAFFSELIKQYMEAAAELVVPLIVDVGVGENW 498
>gi|29569818|gb|AAO85272.1| DNA polymerase I [Thermomicrobium roseum]
Length = 917
Score = 247 bits (630), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 171/494 (34%), Positives = 246/494 (49%), Gaps = 40/494 (8%)
Query: 1694 GRWKNQ--MRRA----AHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLA 1747
GR K Q M RA C V T L VL L + + IE+PL++VL
Sbjct: 452 GRGKKQLTMDRAEIARVTQYACADVEATYRLVEVLRPQLEAHNQLRLFTEIELPLIDVLI 511
Query: 1748 DMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPI 1807
DME GI +D+ Q +L +L LE++ Y LAG F++ + ++ +L+ L LP
Sbjct: 512 DMEKAGIAIDVPYLEQLSIMLDGQLHALERRIYELAGHPFNINSPQQLSTLLFDELGLP- 570
Query: 1808 PEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQK 1867
+ K S + L+ LR HPIV I E+R L KL + + ++ + Q
Sbjct: 571 --RGKRTKTGYSVSQEVLENLRDTHPIVEAILEYRQLLKLKSTYVDALPR----QVHPQT 624
Query: 1868 YTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIP 1927
+H + QT ATGRLS +PNLQ + E ++ + + R +
Sbjct: 625 GRVHTIFHQTVAATGRLSSSDPNLQNIPARGELGLAVRRAFIADN---------RPGYRI 675
Query: 1928 SQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQE 1987
+ E +LL+ DYSQIELRLMAHFS+DPAL+ ++ D+ A+ G D+V +
Sbjct: 676 ADEPILLLSVDYSQIELRLMAHFSQDPALLRAFAE-GKDIHAATASEVFGVPLDAVTPEM 734
Query: 1988 RDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKG 2047
R K + +GI+YGM L+ S +A+ I+++ FPGVA +L + G
Sbjct: 735 RRIAKVVNFGIMYGMQAYGLARDTGMSRQDAQRFIEAYFQRFPGVARYLEETRRRAAELG 794
Query: 2048 YVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYK 2107
YVE+L GR+R+L +I N + A+R AVN QG+AADI+K+AMI +H +
Sbjct: 795 YVETLFGRRRYLPEITSSNPARRQAAERMAVNMPLQGTAADIMKLAMIAVH--------R 846
Query: 2108 PDSSLAANFQMLKG-RCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVK 2166
P + +G R R+LLQVHDELVLEV S + LV M L VPL V
Sbjct: 847 PLAE--------RGLRSRMLLQVHDELVLEVPESELATTTELVTTRMSRVVELSVPLEVD 898
Query: 2167 IQVGSTWGSLEPFQ 2180
+ G W LEP +
Sbjct: 899 AKAGPNWADLEPVR 912
>gi|138896291|ref|YP_001126744.1| DNA polymerase I [Geobacillus thermodenitrificans NG80-2]
gi|134267804|gb|ABO67999.1| DNA polymerase I [Geobacillus thermodenitrificans NG80-2]
Length = 878
Score = 246 bits (629), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 265/545 (48%), Gaps = 60/545 (11%)
Query: 1633 GLENVGSSFLLLSPVHL----KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA 1688
G+E G +F LL +L +D D+ V+ + + RS K VK+ L E
Sbjct: 386 GIELRGVAFDLLLAAYLLNPAQDAGDIAAVAKMKQYEAVRSDEAVYGKGVKRSLPDEQTL 445
Query: 1689 AANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLAD 1748
A + R+ A AL L + E + L +E PL +LA+
Sbjct: 446 AEH----------------LVRKAAAIWALEQPFMDDLRNNEQDQLLTKLEQPLAAILAE 489
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIP 1808
ME G+ VD + Q + L ++LR +E++ Y LAG +F++ + + +L+ L+LP+
Sbjct: 490 MEFTGVNVDTKRLEQMGSELAEQLRAIEQRIYELAGQEFNINSPKQLGVILFEKLQLPV- 548
Query: 1809 EGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKY 1868
K K ST L+ L H IV I +R L KL + + + + R
Sbjct: 549 --LKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTGK--- 603
Query: 1869 TLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+H + Q T TGRLS EPNLQ + +E + KI R F+PS
Sbjct: 604 -VHTMFNQALTQTGRLSSAEPNLQNIPIRLE---------------EGRKI--RQAFVPS 645
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
+ +W++ AADYSQIELR++AH + D LI + D+ T A SE+ V + R
Sbjct: 646 EPDWLIFAADYSQIELRVLAHIADDDNLIEAFQR-DLDIHTKTAMDIFHVSEEEVTANMR 704
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K + +GI+YG+ L++ LN + EA E I+ + +SFPGV ++ V QKGY
Sbjct: 705 RQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKQYMENIVQEAKQKGY 764
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
V +L R+R+L I N +S A+R A+N+ QGSAADIIK AMI+
Sbjct: 765 VTTLLHRRRYLPDITSRNFNVRSFAERTAMNTPIQGSAADIIKKAMID------------ 812
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
LAA + + + RLLLQVHDEL+LE I+ LV + ME A L VPL V
Sbjct: 813 ---LAARLKEEQLQARLLLQVHDELILEAPKEEIERLCELVPEVMEQAVTLRVPLKVDYH 869
Query: 2169 VGSTW 2173
G TW
Sbjct: 870 YGPTW 874
>gi|297672987|ref|XP_002814560.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase nu [Pongo abelii]
Length = 1585
Score = 246 bits (628), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 259/473 (54%), Gaps = 47/473 (9%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
LW+L + +E+PL+ +LA ME I V+ E + LL +L+ LE++A+
Sbjct: 1105 LWQLFCT---------LELPLIPILAVMESHAIQVNKEEMEKTSALLGARLKELEQEAHF 1155
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG-----KQHPSTDKHCLDLLRHEHPIVP 1836
+AG F + + + +L+G LKL + N +++PST + L+ LR HP+
Sbjct: 1156 VAGEPFLITSNNQLREILFGKLKLHLLSQRNSLPRTGLQKYPSTSEAVLNALRDFHPLPK 1215
Query: 1837 VIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV-E 1895
+I E+R + K+ + + + + T+K ++ W QT T TGRLS + PN+Q + +
Sbjct: 1216 IILEYRQVHKIKSTFVDGLLA------CTKKGSISSTWNQTGTVTGRLSAKHPNIQGISK 1269
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
H ++ ++ + G E I+ R F+ S+ + LAAD+SQIELR++AH S DP
Sbjct: 1270 HPIQ--ITTPKNFKGK-EDKTLTISPRAMFVSSKGH-TFLAADFSQIELRILAHLSGDPE 1325
Query: 1956 LIGLLSKPH-GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+ L + DVF+ + ++W + V +R+QTK+++Y ++YG G L+ L
Sbjct: 1326 LLKLFQEAERDDVFSTLTSQWKDVPMEQVTHADREQTKKVVYAVVYGAGKERLAACLGVP 1385
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
EA + ++SF + + + A++ CHQ GYV S+ GR+R L +I + + +++A+
Sbjct: 1386 VQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGYVVSIMGRRRPLPRIHAHDQQLRAQAE 1445
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
RQAVN + QGSAAD+ K+AMI++ + + +L A RL+ Q+HDEL+
Sbjct: 1446 RQAVNFVVQGSAADLCKLAMIHVFTAVAAS-----RTLTA---------RLVAQIHDELL 1491
Query: 2135 LEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLVKIQVGSTWGSLEPFQ 2180
EV+ I E +LV++ MES AL L VPL V + G +WG L P Q
Sbjct: 1492 FEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGRSWGHLVPLQ 1544
>gi|125973403|ref|YP_001037313.1| DNA polymerase I [Clostridium thermocellum ATCC 27405]
gi|256004380|ref|ZP_05429361.1| DNA polymerase I [Clostridium thermocellum DSM 2360]
gi|385778683|ref|YP_005687848.1| DNA polymerase I [Clostridium thermocellum DSM 1313]
gi|419722963|ref|ZP_14250099.1| DNA polymerase I [Clostridium thermocellum AD2]
gi|419724689|ref|ZP_14251748.1| DNA polymerase I [Clostridium thermocellum YS]
gi|125713628|gb|ABN52120.1| DNA polymerase I [Clostridium thermocellum ATCC 27405]
gi|255991664|gb|EEU01765.1| DNA polymerase I [Clostridium thermocellum DSM 2360]
gi|316940363|gb|ADU74397.1| DNA polymerase I [Clostridium thermocellum DSM 1313]
gi|380771908|gb|EIC05769.1| DNA polymerase I [Clostridium thermocellum YS]
gi|380781020|gb|EIC10682.1| DNA polymerase I [Clostridium thermocellum AD2]
Length = 894
Score = 246 bits (628), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/437 (35%), Positives = 240/437 (54%), Gaps = 40/437 (9%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+PLV LADME +G V+++ ++ LQ+K+ + K+ YTLAG +F++ + +
Sbjct: 494 DIELPLVRTLADMEYYGFKVNVDALVEFSKELQEKIDVVTKEIYTLAGEEFNINSPKQLG 553
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L+ L LPI + K K STD L+ L H IV I E+R L KL + +
Sbjct: 554 VILFEKLGLPIIK---KTKTGYSTDAEVLEELSDRHEIVEKILEYRQLVKLKSTYAEGL- 609
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
LA I+ T K +H + QT TATGR+S EPNLQ + ++ +M +
Sbjct: 610 -LAVINPYTGK--IHSSFNQTVTATGRISSTEPNLQNIP--IKLEMGRK----------- 653
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R FIPS EN++LL ADYSQIELR++AH + D +I + D+ T AA
Sbjct: 654 ----IRKVFIPSDENYLLLDADYSQIELRVLAHITNDENMINAFLN-NEDIHTSTAASVF 708
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G ++ V R + K + +GI+YG+G +L++ L S EA+ I + +P V ++
Sbjct: 709 GIPKEEVTPLMRSRAKAVNFGIVYGIGDFSLAKDLKISRKEARAYIDGYLDRYPNVKKYM 768
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
H V +KG+V ++ R+R+L ++K N +S +R A+N+ QGSAADIIKIAM+
Sbjct: 769 HDIVEEGKEKGFVTTMFMRRRYLPELKSRNFNIRSFGERVAMNTPIQGSAADIIKIAMVK 828
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
+H + K + RL+LQVHDEL++E +E ++ + M++A
Sbjct: 829 VH---------------GELKKRKLKSRLILQVHDELIVETFKDEKEEVEKILLEGMQNA 873
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L VPL+V+I+ GS W
Sbjct: 874 VSLKVPLVVEIKSGSNW 890
>gi|196249912|ref|ZP_03148607.1| DNA polymerase I [Geobacillus sp. G11MC16]
gi|1205984|gb|AAB52611.1| DNA polymerase I [Geobacillus stearothermophilus]
gi|196210426|gb|EDY05190.1| DNA polymerase I [Geobacillus sp. G11MC16]
Length = 876
Score = 246 bits (628), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 265/545 (48%), Gaps = 60/545 (11%)
Query: 1633 GLENVGSSFLLLSPVHL----KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA 1688
G+E G +F LL +L +D D+ V+ + + RS K VK+ L E
Sbjct: 384 GIELRGVAFDLLLAAYLLNPAQDAGDIAAVAKMKQYEAVRSDEAVYGKGVKRSLPDEQTL 443
Query: 1689 AANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLAD 1748
A + R+ A AL L + E + L +E PL +LA+
Sbjct: 444 AEH----------------LVRKAAAIWALEQPFMDDLRNNEQDQLLTKLEQPLAAILAE 487
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIP 1808
ME G+ VD + Q + L ++LR +E++ Y LAG +F++ + + +L+ L+LP+
Sbjct: 488 MEFTGVNVDTKRLEQMGSELAEQLRAIEQRIYELAGQEFNINSPKQLGVILFEKLQLPV- 546
Query: 1809 EGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKY 1868
K K ST L+ L H IV I +R L KL + + + + R
Sbjct: 547 --LKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTGK--- 601
Query: 1869 TLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+H + Q T TGRLS EPNLQ + +E + KI R F+PS
Sbjct: 602 -VHTMFNQALTQTGRLSSAEPNLQNIPIRLE---------------EGRKI--RQAFVPS 643
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
+ +W++ AADYSQIELR++AH + D LI + D+ T A SE+ V + R
Sbjct: 644 EPDWLIFAADYSQIELRVLAHIADDDNLIEAFQR-DLDIHTKTAMDIFHVSEEEVTANMR 702
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K + +GI+YG+ L++ LN + EA E I+ + +SFPGV ++ V QKGY
Sbjct: 703 RQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKQYMENIVQEAKQKGY 762
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
V +L R+R+L I N +S A+R A+N+ QGSAADIIK AMI+
Sbjct: 763 VTTLLHRRRYLPDITSRNFNVRSFAERTAMNTPIQGSAADIIKKAMID------------ 810
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
LAA + + + RLLLQVHDEL+LE I+ LV + ME A L VPL V
Sbjct: 811 ---LAARLKEEQLQARLLLQVHDELILEAPKEEIERLCELVPEVMEQAVTLRVPLKVDYH 867
Query: 2169 VGSTW 2173
G TW
Sbjct: 868 YGPTW 872
>gi|423660570|ref|ZP_17635739.1| DNA polymerase I [Bacillus cereus VDM022]
gi|401302478|gb|EJS08057.1| DNA polymerase I [Bacillus cereus VDM022]
Length = 877
Score = 246 bits (628), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 270/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 366 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E R L +L+ +
Sbjct: 456 YDVKQTFLEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMREELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDRHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + DP
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDPG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ + D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAF-RHDMDIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QGSAADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|343518081|ref|ZP_08755077.1| DNA-directed DNA polymerase [Haemophilus pittmaniae HK 85]
gi|343394932|gb|EGV07479.1| DNA-directed DNA polymerase [Haemophilus pittmaniae HK 85]
Length = 696
Score = 246 bits (628), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/555 (31%), Positives = 274/555 (49%), Gaps = 59/555 (10%)
Query: 1633 GLENVGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSE 1685
++ VG +F + ++GID+ + S++L + N++ K+ L +
Sbjct: 183 AIQKVGQNFKYDLTIFARNGIDVQGVAFDTMLESYVL----NSTGRHNMDDLAKRYLGHQ 238
Query: 1686 AAAAANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLN-I 1738
+ +G+ KNQ+ A T L VLW+ L E +E L +
Sbjct: 239 TISFEEIAGKGKNQLTFNQIQLEQATEYAAEDADVTMKLQQVLWEKLSKEPTLEKLFKEM 298
Query: 1739 EIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANV 1798
E+PL+ VL+ ME G+ +D + N + +L LE++AY LAG F+L + + +
Sbjct: 299 ELPLLGVLSRMERRGVLIDSDALFLQSNEIANRLSELEEQAYVLAGQPFNLASTKQLQEI 358
Query: 1799 LYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSL 1858
L+ L LPI + KG PST++ L+ L H + V+ EHR L+KL + + +
Sbjct: 359 LFDKLGLPIIQKTPKGA--PSTNEEVLEELAFSHELPKVLVEHRGLSKLKSTYTDKLPQM 416
Query: 1859 ARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCK 1918
++ Q +H + Q TATGRLS +PNLQ + + NE+
Sbjct: 417 ----VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNEE-----------G 455
Query: 1919 INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGR 1978
R FI ++E + ++AADYSQIELR+MAH S+D LI ++ D+ AA G
Sbjct: 456 RRIRQAFI-AREGFTVVAADYSQIELRIMAHLSQDQGLINAFTQGK-DIHRSTAAEIFGV 513
Query: 1979 SEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHV 2038
+ D V S++R K + +G++YGM LS QL +A+ + + +PGV +++H
Sbjct: 514 ALDEVTSEQRRNAKAINFGLIYGMSAFGLSRQLGIGRADAQSYMDLYFKRYPGVQTFMHD 573
Query: 2039 AVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIH 2098
+GYVE+L GR+ +L I N + A+R A+N+ QG+AADIIK AMI +
Sbjct: 574 IREKAKAQGYVETLFGRRLYLPDINSSNGMRRKAAERVAINAPMQGTAADIIKRAMIQLD 633
Query: 2099 SIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAAL 2158
+ PD +++QVHDELV EV + L++ MESAA
Sbjct: 634 QKLQN---DPD-------------IAMIMQVHDELVFEVRSEKVAFYSELIKTQMESAAD 677
Query: 2159 LLVPLLVKIQVGSTW 2173
L+VPL+V + G+ W
Sbjct: 678 LVVPLIVDVGQGTNW 692
>gi|269837619|ref|YP_003319847.1| DNA polymerase I [Sphaerobacter thermophilus DSM 20745]
gi|269786882|gb|ACZ39025.1| DNA polymerase I [Sphaerobacter thermophilus DSM 20745]
Length = 915
Score = 245 bits (626), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 251/534 (47%), Gaps = 43/534 (8%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAH 1705
D I +++L + +L+ RL E GR +NQ+ +AA
Sbjct: 419 AFDTMIAAYLLG-----ENALDLKSLAFNRLGMEMTEITTLIGRGRNQLTMDLTDVQAAG 473
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
+ C V T L VL L +++ IE+PL++VL DME GI VD++
Sbjct: 474 DYACADVEATYRLVEVLQPDLEAQQQERLFREIEMPLIDVLIDMEKVGIAVDVDLLRDLS 533
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
L +L LE++ Y LA +F++ + +A VL+ L LP + K S + L
Sbjct: 534 RQLTGQLAELEREIYGLAKHEFNINSTRQLATVLFDELGLP---AGRRTKTGYSVSQEVL 590
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ LRH HPIV I E+R L KL + + ++ ++ + +H + QT ATGRLS
Sbjct: 591 ENLRHAHPIVDCILEYRQLLKLKSTYVDALPE----QVNPETGRIHTSFNQTIAATGRLS 646
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + E S + + R + P E +LL+ADYSQIELR
Sbjct: 647 STDPNLQNIPVRTELGRSVRRAFIADN---------RPGYRPFDEEAVLLSADYSQIELR 697
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
LMAH S D L+ + D+ AA G + V R K + +GI+YGM
Sbjct: 698 LMAHLSGDERLVHAFREGQ-DIHAATAADVFGVPLEQVTPDMRRVAKTVNFGIMYGMQAY 756
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
L+ S +A+ I + + PGV ++L Q+GYV S+ GR+R+ I
Sbjct: 757 GLARDTGMSRQDAQRFIDRYMARLPGVRAFLERTKRQALQQGYVTSMFGRRRYTPDIDSS 816
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N QGSAADI+KIAMI +H + R R+
Sbjct: 817 NVNRRLAAERMAINMPLQGSAADIMKIAMIRVHD---------------EMRRRGLRSRM 861
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
LLQVHDEL+ EV S ++ L ME L VPL+V++ G+ W LEP
Sbjct: 862 LLQVHDELLFEVPRSELRTMADLAVDVMEKVVTLNVPLVVEVAAGANWDELEPL 915
>gi|113460863|ref|YP_718930.1| DNA polymerase I [Haemophilus somnus 129PT]
gi|112822906|gb|ABI24995.1| DNA polymerase I [Haemophilus somnus 129PT]
Length = 951
Score = 245 bits (626), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/461 (34%), Positives = 252/461 (54%), Gaps = 44/461 (9%)
Query: 1715 TRALCSVLWK-LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VLW+ L S L++ +IE+PLV VL+ ME G+ +D + L+ + ++L
Sbjct: 529 TMKLHQVLWQELQQSPSLVKVFNDIELPLVKVLSKMERNGVLIDSQALLKQSEKIARRLT 588
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE++ Y AG +F+L + + +L+ L LPI KG PST++ L+ L +
Sbjct: 589 ALEQQVYQEAGAEFNLASTKQLQEILFTKLALPIIAKTPKGA--PSTNEDVLETLAQQGH 646
Query: 1834 IVP-VIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IVP ++ EHR LAKL + + S+ ++ + +H + Q TATGRLS +PNLQ
Sbjct: 647 IVPKLLMEHRGLAKLKSTYTDKLPSM----VNKKTGRVHTSYHQAVTATGRLSSSDPNLQ 702
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ + NE+ HC R FI +++ + ++AADYSQIELR+MAH S+
Sbjct: 703 NI------PIKNEE--------GHC---IRQAFI-ARKGYKIIAADYSQIELRIMAHLSQ 744
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI ++ D+ AA G + V S++R K + +G++YGM LS QL
Sbjct: 745 DNGLIMAFNEGK-DIHRSTAAEIFGIPLNEVTSEQRRSAKAINFGLIYGMSSFGLSNQLG 803
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
S A++ + + +PGV +++ ++GYVE+L GR+ +L +I N +
Sbjct: 804 ISRANAQKYMDLYFQRYPGVQTFMVDIREKAKEQGYVETLFGRRLYLPEINSSNAIRRKG 863
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK+AMI IH+ ++ K ++++QVHDE
Sbjct: 864 AERVAINAPMQGTAADIIKLAMIAIHN-----------------EIKKNDIQMIMQVHDE 906
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV EV + + E +L++ ME+AA L VPL+V I VG W
Sbjct: 907 LVFEVKENKVDEYSALIKSLMENAAHLSVPLIVDIGVGDNW 947
>gi|344203156|ref|YP_004788299.1| DNA polymerase I [Muricauda ruestringensis DSM 13258]
gi|343955078|gb|AEM70877.1| DNA polymerase I [Muricauda ruestringensis DSM 13258]
Length = 944
Score = 245 bits (626), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/436 (35%), Positives = 230/436 (52%), Gaps = 38/436 (8%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IEIPLV VLADMEL GI +D E L+ + LEKK Y AG +F++ + +
Sbjct: 543 IEIPLVRVLADMELEGINLDKEYLNDLSVALEVDIAELEKKIYENAGEEFNIASPKQLGE 602
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+G LKL K Q ST + L L +H I+ + ++R LAKL + + ++ +
Sbjct: 603 ILFGKLKLVDKPKKTKTGQF-STSEDVLSYLAKDHDIIQNVLDYRGLAKLKSTYVDALPN 661
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ + +H ++QT ATGRLS PNLQ + E
Sbjct: 662 ----EVQEKTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQ-------------- 703
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R FIP EN++LLAADYSQIELR++A S++ +I K D+ A++
Sbjct: 704 ---VRKAFIPRDENYVLLAADYSQIELRIIAALSEEDTMISAF-KNGEDIHASTASKVFN 759
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
D V ++R K + +GI+YG+ LS Q + + EAKE I+++ ++P + +++
Sbjct: 760 VPIDQVTREQRSNAKTVNFGIIYGVSAFGLSNQTDLNRTEAKELIETYYKTYPKLRNYMS 819
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
V + GYV+++ GR+R+L I GN + A+R AVN+ QGSAADIIKIAMINI
Sbjct: 820 EQVDFAREHGYVQTVLGRRRYLKDINAGNQVVRGAAERNAVNAPIQGSAADIIKIAMINI 879
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA 2157
H + G YK ++LLQVHDELV + ++E L++ ME+A
Sbjct: 880 HKKLSEGKYK---------------TKMLLQVHDELVFDCYKPELEEMKELIKTEMENAY 924
Query: 2158 LLLVPLLVKIQVGSTW 2173
L VPL V++ VG W
Sbjct: 925 KLSVPLDVEVGVGENW 940
>gi|312109948|ref|YP_003988264.1| DNA polymerase I [Geobacillus sp. Y4.1MC1]
gi|311215049|gb|ADP73653.1| DNA polymerase I [Geobacillus sp. Y4.1MC1]
Length = 878
Score = 245 bits (626), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 181/532 (34%), Positives = 265/532 (49%), Gaps = 49/532 (9%)
Query: 1647 VHLKDGI--DMCIVSWILWPDD--ERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRR 1702
VHL+ GI D+ I S++L P E ++ K+ S EA + ++
Sbjct: 387 VHLR-GIQFDLLIASYLLNPSQSTEDVASIAKTKQYAGVQSDEAVYGKGAKQKVPDEQVL 445
Query: 1703 AAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCL 1762
A H R+ A RAL L E ++E+PL +LA+ME G+ VD+E
Sbjct: 446 AEH--LVRKAAAIRALEQGFIHDLQENEQYSLFTDLELPLSTILAEMEFAGVKVDVERLK 503
Query: 1763 QARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDK 1822
+ L ++L+ +E++ Y LAG +F++ + + +L+ L+LP+ + K K ST
Sbjct: 504 EMGEELAEQLKEVEQEIYRLAGQEFNINSPKQLGVILFEKLQLPVLK---KTKTGYSTSA 560
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATG 1882
L+ L +H IV I +R L KL + + + + + T K +H + Q T TG
Sbjct: 561 EVLEKLAPQHEIVEKILHYRQLGKLQSTYIEGLLKV--VHRDTNK--VHTIFNQALTQTG 616
Query: 1883 RLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQI 1942
RLS EPNLQ + +E + KI R FIPS+ +W++ +ADYSQI
Sbjct: 617 RLSSTEPNLQNIPIRLE---------------EGRKI--RQAFIPSEPDWVIFSADYSQI 659
Query: 1943 ELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYG 2001
ELR++AH + D LI HG D+ T A S++ V R Q K + +GI+YG
Sbjct: 660 ELRVLAHIANDENLIDAFR--HGLDIHTKTAMDIFHVSKEEVTPNMRRQAKAVNFGIVYG 717
Query: 2002 MGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSK 2061
+ LS+ LN + EA E IK + FPGV ++ V QKGYV +L R+R+L
Sbjct: 718 ISDYGLSQNLNITRKEAAEFIKRYFEIFPGVKQYMKDIVQEAKQKGYVTTLLHRRRYLPD 777
Query: 2062 IKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKG 2121
I N +S A+R A+N+ QGSAADIIK AMI+ L+ Q
Sbjct: 778 ITSRNFNLRSFAERTAMNTPIQGSAADIIKKAMID---------------LSKRLQKENM 822
Query: 2122 RCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+ R+LLQVHDEL+LE I+ +V + ME+A L VPL V G TW
Sbjct: 823 KARMLLQVHDELILEAPKDEIERLQQIVPEVMENAVQLRVPLKVDYHFGPTW 874
>gi|423718989|ref|ZP_17693171.1| DNA polymerase I [Geobacillus thermoglucosidans TNO-09.020]
gi|383367892|gb|EID45167.1| DNA polymerase I [Geobacillus thermoglucosidans TNO-09.020]
Length = 877
Score = 245 bits (625), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 266/533 (49%), Gaps = 51/533 (9%)
Query: 1647 VHLKDGI--DMCIVSWILWPDDERSSNPNLEKEVKKRL---SSEAAAAANRSGRWKNQMR 1701
VHL+ GI D+ I S++L P ++ K K+ + S EA + ++
Sbjct: 386 VHLR-GIQFDLLIASYLLNPSQSTEDVASIAK-TKQYVGVQSDEAVYGKGAKQKVPDEQV 443
Query: 1702 RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGC 1761
A H R+ A RAL L E ++E+PL +LA+ME G+ VD+E
Sbjct: 444 LAEH--LVRKAAAIRALEQGFIHDLQENEQYSLFTDLELPLSTILAEMEFAGVKVDVERL 501
Query: 1762 LQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTD 1821
+ L ++L+ +E++ Y LAG +F++ + + +L+ L+LP+ + K K ST
Sbjct: 502 KEMGEELAEQLKEVEQEIYRLAGQEFNINSPKQLGVILFEKLQLPVLK---KTKTGYSTS 558
Query: 1822 KHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTAT 1881
L+ L +H IV I +R L KL + + + + + T K +H + Q T T
Sbjct: 559 AEVLEKLAPQHEIVEKILHYRQLGKLQSTYIEGLLKV--VHRDTNK--VHTIFNQALTQT 614
Query: 1882 GRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQ 1941
GRLS EPNLQ + +E + KI R FIPS+ +W++ +ADYSQ
Sbjct: 615 GRLSSTEPNLQNIPIRLE---------------EGRKI--RQAFIPSEPDWVIFSADYSQ 657
Query: 1942 IELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILY 2000
IELR++AH + D LI HG D+ T A S++ V R Q K + +GI+Y
Sbjct: 658 IELRVLAHIANDENLIDAFR--HGLDIHTKTAMDIFHVSKEEVTPNMRRQAKAVNFGIVY 715
Query: 2001 GMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLS 2060
G+ LS+ LN + EA E IK + FPGV ++ V QKGYV +L R+R+L
Sbjct: 716 GISDYGLSQNLNITRKEAAEFIKRYFEIFPGVKQYMKDIVQEAKQKGYVTTLLHRRRYLP 775
Query: 2061 KIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLK 2120
I N +S A+R A+N+ QGSAADIIK AMI+ L+ Q
Sbjct: 776 DITSRNFNLRSFAERTAMNTPIQGSAADIIKKAMID---------------LSKRLQKEN 820
Query: 2121 GRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+ R+LLQVHDEL+LE I+ +V + ME+A L VPL V G TW
Sbjct: 821 MKARMLLQVHDELILEAPKDEIERLQQIVPEVMENAVQLRVPLKVDYHFGPTW 873
>gi|336234370|ref|YP_004586986.1| DNA polymerase I [Geobacillus thermoglucosidasius C56-YS93]
gi|335361225|gb|AEH46905.1| DNA polymerase I [Geobacillus thermoglucosidasius C56-YS93]
Length = 878
Score = 245 bits (625), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 266/533 (49%), Gaps = 51/533 (9%)
Query: 1647 VHLKDGI--DMCIVSWILWPDDERSSNPNLEKEVKKRL---SSEAAAAANRSGRWKNQMR 1701
VHL+ GI D+ I S++L P ++ K K+ + S EA + ++
Sbjct: 387 VHLR-GIQFDLLIASYLLNPSQSTEDVASIAK-TKQYVGVQSDEAVYGKGAKQKVPDEQV 444
Query: 1702 RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGC 1761
A H R+ A RAL L E ++E+PL +LA+ME G+ VD+E
Sbjct: 445 LAEH--LVRKAAAIRALEQGFIHDLQENEQYSLFTDLELPLSTILAEMEFAGVKVDVERL 502
Query: 1762 LQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTD 1821
+ L ++L+ +E++ Y LAG +F++ + + +L+ L+LP+ + K K ST
Sbjct: 503 KEMGEELAEQLKEVEQEIYRLAGQEFNINSPKQLGVILFEKLQLPVLK---KTKTGYSTS 559
Query: 1822 KHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTAT 1881
L+ L +H IV I +R L KL + + + + + T K +H + Q T T
Sbjct: 560 AEVLEKLAPQHEIVEKILHYRQLGKLQSTYIEGLLKV--VHRDTNK--VHTIFNQALTQT 615
Query: 1882 GRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQ 1941
GRLS EPNLQ + +E + KI R FIPS+ +W++ +ADYSQ
Sbjct: 616 GRLSSTEPNLQNIPIRLE---------------EGRKI--RQAFIPSEPDWVIFSADYSQ 658
Query: 1942 IELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILY 2000
IELR++AH + D LI HG D+ T A S++ V R Q K + +GI+Y
Sbjct: 659 IELRVLAHIANDENLIDAFR--HGLDIHTKTAMDIFHVSKEEVTPNMRRQAKAVNFGIVY 716
Query: 2001 GMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLS 2060
G+ LS+ LN + EA E IK + FPGV ++ V QKGYV +L R+R+L
Sbjct: 717 GISDYGLSQNLNITRKEAAEFIKRYFEIFPGVKQYMKDIVQEAKQKGYVTTLLHRRRYLP 776
Query: 2061 KIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLK 2120
I N +S A+R A+N+ QGSAADIIK AMI+ L+ Q
Sbjct: 777 DITSRNFNLRSFAERTAMNTPIQGSAADIIKKAMID---------------LSKRLQKEN 821
Query: 2121 GRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+ R+LLQVHDEL+LE I+ +V + ME+A L VPL V G TW
Sbjct: 822 MKARMLLQVHDELILEAPKDEIERLQQIVPEVMENAVQLRVPLKVDYHFGPTW 874
>gi|407473451|ref|YP_006787851.1| DNA polymerase I [Clostridium acidurici 9a]
gi|407049959|gb|AFS78004.1| DNA polymerase I [Clostridium acidurici 9a]
Length = 889
Score = 245 bits (625), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 191/657 (29%), Positives = 293/657 (44%), Gaps = 100/657 (15%)
Query: 1519 KHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQ 1578
K S N+ + E+ GLA+ ++ YY+NL + DK V
Sbjct: 327 KTSFENNPLTGEVLGLAIKYDPKDNYYINLEE-----------------IDKEVF----- 364
Query: 1579 LEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVG 1638
+ EI+E RD++K + N+K I +L + +Q G
Sbjct: 365 -------FDISKEILEDRDIKKISHNIKEDIIILLRYGIDLQ-----------------G 400
Query: 1639 SSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKR--LSSEAAAAANRSGRW 1696
F D I +++ P L KE KR S E +S +
Sbjct: 401 IDF------------DSMIAQYLINPSQSNYDINLLTKEYLKRDIHSEEDILGKGKSKNF 448
Query: 1697 KNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGV 1756
K+ V + + +L +E+ E ++EIPL VLADME G V
Sbjct: 449 KDLDIEETSKFFVNIVDSIFNIRPTIEIILKEQEMEELFYDVEIPLATVLADMEYRGFTV 508
Query: 1757 DMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQ 1816
D+E + N KK+ L + Y + +F++ + + +L+ L+LP+ + K K
Sbjct: 509 DLESLKELGNEFDKKIEILTAEIYKYSETEFNINSPKQLGEILFNKLELPVIK---KTKT 565
Query: 1817 HPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQ 1876
ST+ L+ L HPIV I E+R + KL + + + ++ M +H + Q
Sbjct: 566 GYSTNAEVLEKLIDSHPIVEKILEYRQIVKLKSTYVDGLINV----MDKNTNKVHSSFNQ 621
Query: 1877 TSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLA 1936
T T TGR+S EPNLQ + E + KI R FIP E++ L
Sbjct: 622 TITTTGRISSTEPNLQNIPIRTE---------------EGRKI--RKVFIPKSEDYTLAD 664
Query: 1937 ADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIY 1996
ADYSQIELR++AH S DP LI D+ A+ D V S R K + +
Sbjct: 665 ADYSQIELRVLAHLSNDPKLIEAFFTGE-DIHRRTASEVFDVPLDEVTSTMRSNAKAVNF 723
Query: 1997 GILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRK 2056
GI+YG+ LS LN S ++KE I ++ + V ++ + +KGYVE++ R+
Sbjct: 724 GIIYGISDFGLSRDLNISRKQSKEYIDNYFERYTNVKGFMDSIIKDGKKKGYVETILKRR 783
Query: 2057 RFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANF 2116
R+L ++ N +S +R A+N+ QGSAADIIK+AM+ GVY
Sbjct: 784 RYLPELSSRNFNIRSFGERMAMNTPIQGSAADIIKVAMV--------GVY-------YEL 828
Query: 2117 QMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+ K + RL+LQVHDEL++E I+E L++ ME + L VPL V ++ G +W
Sbjct: 829 KQRKLKSRLILQVHDELIVEAYKDEIEEVKELLRNIMEKSIKLNVPLKVDMKTGDSW 885
>gi|85003083|gb|ABC68603.1| DNA polymerase I [Geobacillus caldoxylosilyticus]
Length = 878
Score = 245 bits (625), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 256/521 (49%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D+ I S++L P ++ K + A + + +A R+
Sbjct: 394 FDLLIASYLLNPSQSTEDVASVAKTKQYMAVQSDEAVYGKGAKQTVPEEKALAEHLVRKA 453
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
A RAL L E ++E+PL ++LA+ME G+ VD+E + L ++L
Sbjct: 454 AAIRALEKEFIHDLQENEQYALFTDLELPLSSILAEMEFTGVKVDVERLKEMGEELTEQL 513
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
R +E++ Y LAG +F++ + + +L+ L+LP+ + K K ST L+ L +H
Sbjct: 514 RAVEQEIYELAGQEFNINSPKQLGVILFEKLQLPVLK---KTKTGYSTSADVLEKLAPQH 570
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I +R L KL + + + + + T K +H + Q T TGRLS EPNLQ
Sbjct: 571 EIVEKILHYRQLGKLQSTYIEGLLKV--VHCDTHK--VHTIFNQALTQTGRLSSTEPNLQ 626
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ +ADYSQIELR++AH +
Sbjct: 627 NIPIRLE---------------EGRKI--RQAFVPSKPDWVIFSADYSQIELRVLAHIAN 669
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A + D V R Q K + +GI+YG+ LS+ LN
Sbjct: 670 DENLIDAF-RHDLDIHTKTAMDIFHVTADEVTPNMRRQAKAVNFGIVYGISDYGLSQNLN 728
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
EA E I+ + FPGV ++ V QKGYV +L R+R+L I N +S
Sbjct: 729 IPRKEAAEFIRRYFEIFPGVKQYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNLRSF 788
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ LA + K + R+LLQVHDE
Sbjct: 789 AERTAMNTPIQGSAADIIKKAMID---------------LADRLKQEKLQARMLLQVHDE 833
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+LE +K +V + ME+A L VPLL+ + G TW
Sbjct: 834 LILEAPKEEVKRLQQIVPEVMENAIQLKVPLLIDFRFGPTW 874
>gi|149195468|ref|ZP_01872548.1| DNA polymerase I [Caminibacter mediatlanticus TB-2]
gi|149134383|gb|EDM22879.1| DNA polymerase I [Caminibacter mediatlanticus TB-2]
Length = 873
Score = 245 bits (625), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 274/529 (51%), Gaps = 67/529 (12%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVA 1713
D I+ WI+ PD S L+ K+ L+ + G KNQ + A
Sbjct: 407 DTMILGWIIDPD----SPVGLDSLAKRYLNHQNIKYKEIVG--KNQNFSEIDIKTAAKYA 460
Query: 1714 QTRALCSV-LWKLLVS---EELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
A+ ++ L+++L EE+ + NIE+PL+N+L DME GI VD+E + + L
Sbjct: 461 SEDAIITLKLYEVLKEKTWEEVKWDIENIEMPLINILIDMEKEGIKVDIEYLEKLQKELT 520
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
+KL L K+ Y LAG +F++ + ++++L+ LKLP+ + G STD+ L+ L+
Sbjct: 521 QKLENLTKEIYNLAGSEFNIKSPKQLSHILFKVLKLPVKKKTKTGY---STDEKVLNSLK 577
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
+ HPI+ + E+R KLL + + A+ + + YT ++LQT TATGRLS + P
Sbjct: 578 NTHPIIEKLLEYRKFDKLLTTYIIPLKEYAKKDKNQKVYT---NFLQTGTATGRLSSKNP 634
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + E IN R+ FI + + ++ DYSQIELRL+AH
Sbjct: 635 NLQNIPTSTE-------------------INIRNAFITDK---LFISLDYSQIELRLLAH 672
Query: 1950 FSKDPALI-GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
FSKDP LI L+ D+ AA+ G + + R K + +G++YGMGP LS
Sbjct: 673 FSKDPHLIEAFLN--DKDIHLETAAKIFGEDK---AKEYRSIAKSINFGLIYGMGPKKLS 727
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
E +N S+ EAKE I+ + +F V ++ +KGYVE+L R+RF N +
Sbjct: 728 ETINVSTKEAKEFIEKYFENFSTVKDFIEKTKVETKEKGYVETLFKRRRFFD-FNSANAR 786
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+ +R+AVN+I QGSAADIIK AMI+I + P S +++LQ
Sbjct: 787 TLAAYEREAVNTIFQGSAADIIKKAMIDIKNKF------PSS-------------KMILQ 827
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+HDEL+ E+D K+ ++ ME+A L VPL V I WG L+
Sbjct: 828 IHDELIFEIDN---KDEAYEYKEIMENAIKLEVPLKVGISFAKRWGELK 873
>gi|423519268|ref|ZP_17495749.1| DNA polymerase I [Bacillus cereus HuA2-4]
gi|401159625|gb|EJQ67008.1| DNA polymerase I [Bacillus cereus HuA2-4]
Length = 877
Score = 244 bits (624), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 269/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 366 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFLEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDRHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH +KDP
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIAKDPG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QGSAADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|32130563|gb|AAF24859.3|AF050678_1 DNA polymerase I [Thermomicrobium roseum]
Length = 917
Score = 244 bits (624), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 245/494 (49%), Gaps = 40/494 (8%)
Query: 1694 GRWKNQ--MRRA----AHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLA 1747
GR K Q M RA C V T L VL L + + IE+PL++VL
Sbjct: 452 GRGKKQLTMDRAEIARVTQYACADVEATYRLVEVLRPQLEAHNQLRLFTEIELPLIDVLI 511
Query: 1748 DMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPI 1807
DME GI +D+ Q +L +L LE++ Y LAG ++ + ++ +L+ L LP
Sbjct: 512 DMEKAGIAIDVPYLEQLSIMLDGQLHALERRIYELAGHPLNINSPQQLSTLLFDELGLP- 570
Query: 1808 PEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQK 1867
+ K S + L+ LR HPIV I E+R L KL + + ++ + Q
Sbjct: 571 --RGKRTKTGYSVSQEVLENLRDTHPIVEAILEYRQLLKLKSTYVDALPR----QVHPQT 624
Query: 1868 YTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIP 1927
+H + QT ATGRLS +PNLQ + E ++ + + R +
Sbjct: 625 GRVHTIFHQTVAATGRLSSSDPNLQNIPARGELGLAVRRAFIADN---------RPGYRI 675
Query: 1928 SQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQE 1987
+ E +LL+ DYSQIELRLMAHFS+DPAL+ ++ D+ A+ G D+V +
Sbjct: 676 ADEPILLLSVDYSQIELRLMAHFSQDPALLRAFAE-GKDIHAATASEVFGVPLDAVTPEM 734
Query: 1988 RDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKG 2047
R K + +GI+YGM L+ S +A+ I+++ FPGVA +L + G
Sbjct: 735 RRIAKVVNFGIMYGMQAYGLARDTGMSRQDAQRFIEAYFQRFPGVARYLEETRRRAAELG 794
Query: 2048 YVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYK 2107
YVE+L GR+R+L +I N + A+R AVN QG+AADI+K+AMI +H +
Sbjct: 795 YVETLFGRRRYLPEITSSNPARRQAAERMAVNMPLQGTAADIMKLAMIAVH--------R 846
Query: 2108 PDSSLAANFQMLKG-RCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVK 2166
P + +G R R+LLQVHDELVLEV S + LV M L VPL V
Sbjct: 847 PLAE--------RGLRSRMLLQVHDELVLEVPESELATTTELVTTRMSRVVELSVPLEVD 898
Query: 2167 IQVGSTWGSLEPFQ 2180
+ G W LEP +
Sbjct: 899 AKAGPNWADLEPVR 912
>gi|228993314|ref|ZP_04153230.1| DNA polymerase I [Bacillus pseudomycoides DSM 12442]
gi|228766382|gb|EEM15025.1| DNA polymerase I [Bacillus pseudomycoides DSM 12442]
Length = 877
Score = 244 bits (624), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 276/583 (47%), Gaps = 81/583 (13%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + IQ G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWKGIEIQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRA--AHNGCCRRVAQ 1714
I +++L P D ++ + K + E A + + +RA A + VA+
Sbjct: 397 IAAYLLDPAD---TDKDFRAVAKMK---ETHAVKSDEEVYGKGAKRAVPAQDIVAEHVAR 450
Query: 1715 TRALCSVLWKLLVSE----ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+ + K V E E E +E+PL VLA+ME+ G+ VD E + L
Sbjct: 451 KVHVLYDVQKTFVEELQKNEQYELFTELEMPLARVLAEMEVKGVTVDTERLRSMGDELAG 510
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 511 RLKEMEQEIYELAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLME 567
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
H I+P I +R L KL + + + + S +H + Q T TGRLS +PN
Sbjct: 568 HHEIIPKILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPN 623
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + +E + KI R FIPS+E W++ AADYSQIELR++AH
Sbjct: 624 LQNIPIRLE---------------EGRKI--RQAFIPSKEGWVMYAADYSQIELRVLAHI 666
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
+KD L+ D+ T A G +D V S R Q K + +GI+YG+ LS+
Sbjct: 667 AKDKGLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQN 725
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L + A E I+ + +SFPGV ++ V QKGYV +L R+R++ +I N +
Sbjct: 726 LGITRKAAGEFIEKYFASFPGVKEYMDEIVQEAKQKGYVSTLLNRRRYIPEITSRNFNLR 785
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
S A+R A+N+ QGSAADIIK AMI +A + + RLLLQVH
Sbjct: 786 SFAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVH 830
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+ EV +++ LV + ME A L VPL V G TW
Sbjct: 831 DELIFEVPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSSGPTW 873
>gi|329122862|ref|ZP_08251434.1| DNA-directed DNA polymerase I [Haemophilus aegyptius ATCC 11116]
gi|327472126|gb|EGF17564.1| DNA-directed DNA polymerase I [Haemophilus aegyptius ATCC 11116]
Length = 930
Score = 244 bits (624), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 267/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 444 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLEQATE 499
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 500 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFMQS 559
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 560 NEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 617
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 618 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 673
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 674 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 715
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 716 IMAHLSGDQGLISAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 774
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ + +GYVE+L GR+ +L I
Sbjct: 775 GLSRQLGISRADAQKYMNLYFQRYPSVQQFMTDIRAKAKAQGYVETLFGRRLYLPDINSS 834
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI I +I + PD +
Sbjct: 835 NAMRRKGAERVAINAPMQGTAADIIKRAMIKIDEVI---RHDPD-------------IEM 878
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 879 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAELVVPLIVEVGVGKNW 926
>gi|319775212|ref|YP_004137700.1| DNA polymerase I [Haemophilus influenzae F3047]
gi|317449803|emb|CBY86011.1| DNA polymerase I [Haemophilus influenzae F3047]
Length = 610
Score = 244 bits (624), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 267/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 124 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLEQATE 179
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 180 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFMQS 239
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 240 NEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 297
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 298 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 353
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 354 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 395
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 396 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 454
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ + +GYVE+L GR+ +L I
Sbjct: 455 GLSRQLGISRADAQKYMNLYFQRYPSVQQFMTDIRAKAKAQGYVETLFGRRLYLPDINSS 514
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI I +I + PD +
Sbjct: 515 NAMRRKGAERVAINAPMQGTAADIIKRAMIKIDEVI---RHDPD-------------IEM 558
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 559 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAELVVPLIVEVGVGKNW 606
>gi|187954717|gb|AAI41102.1| DNA polymerase N [Mus musculus]
Length = 866
Score = 244 bits (624), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 172/549 (31%), Positives = 281/549 (51%), Gaps = 45/549 (8%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH 1705
H+ D G+D + +W++ P D + P+ E V K L E + S ++ R
Sbjct: 341 HVADFVGLDPRVAAWLIDPSD---TAPSFEDLVAKHL--EKSITVKPSSTFREASRNTLS 395
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
C + L L L + L + +E+PL+ +LA ME I VD E +
Sbjct: 396 QNVCMNLKILYDLTMDLCSKLKAYGLWQLFCTLELPLIPILAVMENHKIPVDKEEMERTS 455
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN----KGKQHP-ST 1820
LL +L+ LE++A+ +AG +F + + + +L+G LKL + G Q+ ST
Sbjct: 456 ALLGARLKELEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLLSQRKHLPRTGLQNQLST 515
Query: 1821 DKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTA 1880
+ L+ L+ HP+ +I E+R + K+ + + + + + K ++ W QT T
Sbjct: 516 SEAMLNSLQDLHPLPKLILEYRQVHKIKSTFIDGLLAYMK------KGSISSTWNQTGTV 569
Query: 1881 TGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADY 1939
TGRLS + PN+Q + +H + K+S + G E + I+ R F+ S E LAAD+
Sbjct: 570 TGRLSAKHPNIQGISKHPI--KISKPWNFKGKEE-ETVTISPRTLFV-SSEGHTFLAADF 625
Query: 1940 SQIELRLMAHFSKDPALIGLLSKPH-GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGI 1998
SQIELR++AH S DP L+ L + DVF+ + ++W + V +R+QTK+++Y +
Sbjct: 626 SQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDIPIERVTHMDREQTKKVVYSV 685
Query: 1999 LYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF 2058
+YG G L+ L + EA ++ F + + + + CH GYV S+ GR+R
Sbjct: 686 VYGAGKERLAACLGVTVLEATHFLERFLQKYKKIKDFAQTVIGQCHSAGYVTSILGRRRP 745
Query: 2059 LSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQM 2118
L +I + + +++A+RQAVN + QGSAAD+ K+AMI I + + +L A
Sbjct: 746 LPRICAQDQQLRAQAERQAVNFVVQGSAADLCKLAMIRISTAVATS-----PTLTA---- 796
Query: 2119 LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA-------LLLVPLLVKIQVGS 2171
RL+ Q+HDEL+ EV+ + + E +LV++ MES L VPL V + VG
Sbjct: 797 -----RLVAQIHDELLFEVEDTQVPEFAALVRRIMESLQQVQTLELQLQVPLKVNLSVGR 851
Query: 2172 TWGSLEPFQ 2180
+WG L P Q
Sbjct: 852 SWGHLTPLQ 860
>gi|37520205|ref|NP_923582.1| DNA polymerase I [Gloeobacter violaceus PCC 7421]
gi|35211198|dbj|BAC88577.1| DNA polymerase [Gloeobacter violaceus PCC 7421]
Length = 938
Score = 244 bits (623), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 241/467 (51%), Gaps = 44/467 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLN-IEIPLVNVLADMELWGIGVDMEGCLQARN 1766
C A T L VL L + + + IE+PL VLA ME GI +D +
Sbjct: 511 CGEDAAVTLRLVPVLQAKLDEDPRLAGIFKEIEVPLEPVLARMEERGIRIDKAYLGELAQ 570
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
L + L LE++AYTLAG KF+L + ++++L+ L L + + STD L+
Sbjct: 571 ELDRDLESLEQEAYTLAGSKFNLGSPKQLSDLLFNKLGLSAKKSRKTSLGY-STDAAVLE 629
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
LR +HPIV I +RTLAKL + + ++ L + T + +H + QT T TGRLS
Sbjct: 630 KLRDDHPIVEAILSYRTLAKLKSTYVDALPLL--VDPRTDR--VHTDFNQTVTTTGRLSS 685
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
PNLQ + F R F+P + W+L+AADYSQIELR+
Sbjct: 686 SNPNLQNIPVRTSFSR-----------------RIRRAFVP-EPGWLLVAADYSQIELRI 727
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
+AH +++P L+ + GDV T+ A GR E V S+ER K + YG++YGMG
Sbjct: 728 LAHLTQEPVLLEAF-QTGGDVHTLTARLLLGREE--VTSEERRLAKIINYGVVYGMGARR 784
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
+ + S+ EA++ IK+F +P V ++ ++GYVE+L GR+R+ + N
Sbjct: 785 FARETGVSATEAEDFIKAFYRRYPAVFGFMEQTRRMAVEQGYVETLLGRRRYFRGLGQLN 844
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
+++ A R A N+ QG+AADIIKIAM+ + + G R RLL
Sbjct: 845 QRDREGALRAAFNAPIQGTAADIIKIAMVRLEQTLAG-----------------RRTRLL 887
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LQVHDELV E+ P E L++ ME+A LLVPL V++ G W
Sbjct: 888 LQVHDELVFEMPPEERPEVEPLIRSGMENALDLLVPLKVELNAGPNW 934
>gi|423612761|ref|ZP_17588622.1| DNA polymerase I [Bacillus cereus VD107]
gi|401244749|gb|EJR51108.1| DNA polymerase I [Bacillus cereus VD107]
Length = 877
Score = 244 bits (623), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 249/523 (47%), Gaps = 44/523 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEK--EVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D+ I +++L P D + K E S E Q A H R
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPEQEVVAEH--VAR 450
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+V + + L E E +E+PL VLADME+ G+ VD E L
Sbjct: 451 KVHVLYDVKQTFEEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAG 510
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 511 RLKEMEQEIYELAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMD 567
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
H I+P I +R L KL + + + + S +H + Q T TGRLS +PN
Sbjct: 568 HHAIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPN 623
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + +E + KI R F+PS+E W++ AADYSQIELR++AH
Sbjct: 624 LQNIPIRLE---------------EGRKI--RQAFVPSEEGWVMYAADYSQIELRVLAHI 666
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
+ DP L+ K D+ T A G +D V S R Q K + +GI+YG+ LS+
Sbjct: 667 ANDPGLVEAF-KHDMDIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQN 725
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L + A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +
Sbjct: 726 LGITRKAAGEFIEKYLESFPGVKEYMDDIVKDTKQKGYVSTLLNRRRYIPEITSRNFNLR 785
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
S A+R A+N+ QGSAADIIK AMI +A + RLLLQVH
Sbjct: 786 SFAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLEARLLLQVH 830
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+ E +++ LV + ME A L VPL V GSTW
Sbjct: 831 DELIFEAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGSTW 873
>gi|365966721|ref|YP_004948283.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans ANH9381]
gi|365745634|gb|AEW76539.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans ANH9381]
Length = 933
Score = 244 bits (623), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 277/551 (50%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 424 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 479
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPL 1742
+ +G+ KNQ+ A T L VLW KL L+E +IE+PL
Sbjct: 480 EDIAGKGKNQLTFNQIPLEQAGKYAAEDADVTMKLQQVLWQKLQPQPGLVELYQSIELPL 539
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
+ VL+ ME +G+ +D + N + ++L LE +A+TLAG F+L + + +L+
Sbjct: 540 LGVLSRMERYGVLIDSDALFLQSNEITERLTALEMQAHTLAGQPFNLASTKQLQEILFDK 599
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 600 LGLPVLQKTPKGV--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 653
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 654 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 696
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 697 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 754
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 755 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 814
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + A+R A+N+ QG+AADIIK AMI +
Sbjct: 815 AKAQGYVETLFGRRLYLPEINSSNAMRRKGAERVAINAPMQGTAADIIKRAMIKLD---- 870
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 871 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVP 918
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 919 LIVDVGVGENW 929
>gi|416083775|ref|ZP_11586897.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|348010512|gb|EGY50550.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
Length = 502
Score = 244 bits (623), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 268/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + + N++ K+ L + + + +G+ KNQ+ A
Sbjct: 16 FDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISFEDIAGKGKNQLTFNQIPLEQAGK 71
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L VLW KL L+E +IE+PL+ VL+ ME +G+ +D +
Sbjct: 72 YAAEDADVTMKLQQVLWQKLQPQPGLVELYQSIELPLLGVLSRMERYGVLIDSDALFLQS 131
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + ++L LE +A+TLAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 132 NEITERLTALEMQAHTLAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGV--PSTNEEVL 189
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + V+ EHR L+KL + + + ++ Q +H + Q TATGRLS
Sbjct: 190 EELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM----VNPQTGRVHTSYHQAVTATGRLS 245
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE R FI +++ + ++AADYSQIELR
Sbjct: 246 SSDPNLQNI------PIRNE-----------AGRRIRQAFI-ARDGYKIIAADYSQIELR 287
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI ++ D+ AA G + V S++R K + +G++YGM
Sbjct: 288 IMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQVTSEQRRNAKAINFGLIYGMSSF 346
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A+ + + +P V +++H +GYVE+L GR+ +L +I
Sbjct: 347 GLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREKAKAQGYVETLFGRRLYLPEINSS 406
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + G+ + D + +
Sbjct: 407 NAMRRKGAERVAINAPMQGTAADIIKRAMIKL-----DGITRDDPDI-----------HM 450
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV I L+++ ME+AA L+VPL+V + VG W
Sbjct: 451 IMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVPLIVDVGVGENW 498
>gi|416074754|ref|ZP_11584683.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
gi|444337963|ref|ZP_21151873.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
gi|348006757|gb|EGY47152.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
gi|443545907|gb|ELT55637.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
Length = 933
Score = 244 bits (623), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 277/551 (50%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 424 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 479
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPL 1742
+ +G+ KNQ+ A T L VLW KL L+E +IE+PL
Sbjct: 480 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWQKLQPQPGLVELYQSIELPL 539
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
+ VL+ ME +G+ +D + N + ++L LE +A+TLAG F+L + + +L+
Sbjct: 540 LGVLSRMERYGVLIDSDALFLQSNEITERLTALEMQAHTLAGQPFNLASTKQLQEILFDK 599
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 600 LGLPVLQKTPKGV--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 653
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 654 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 696
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 697 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 754
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 755 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 814
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + A+R A+N+ QG+AADIIK AMI +
Sbjct: 815 AKAQGYVETLFGRRLYLPEINSSNAMRRKGAERVAINAPMQGTAADIIKRAMIKLD---- 870
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 871 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVP 918
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 919 LIVDVGVGENW 929
>gi|228999367|ref|ZP_04158946.1| DNA polymerase I [Bacillus mycoides Rock3-17]
gi|228760312|gb|EEM09279.1| DNA polymerase I [Bacillus mycoides Rock3-17]
Length = 877
Score = 244 bits (623), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 276/583 (47%), Gaps = 81/583 (13%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + IQ G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWKGIEIQ-----------------GIYF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRA--AHNGCCRRVAQ 1714
I +++L P D ++ + K + E A + + +RA A + VA+
Sbjct: 397 IAAYLLDPAD---TDKDFRAVAKMK---ETHAVKSDEEVYGKGAKRAVPAQDIVAEHVAR 450
Query: 1715 TRALCSVLWKLLVSE----ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+ + K V E E E +E+PL VLA+ME+ G+ VD E + L
Sbjct: 451 KVHVLYDVQKTFVEELQKNEQYELFTELEMPLARVLAEMEVKGVTVDTERLRSMGDELAG 510
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 511 RLKEMEQEIYELAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLME 567
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
H I+P I +R L KL + + + + S +H + Q T TGRLS +PN
Sbjct: 568 HHEIIPKILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPN 623
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + +E + KI R FIPS+E W++ AADYSQIELR++AH
Sbjct: 624 LQNIPIRLE---------------EGRKI--RQAFIPSKEGWVMYAADYSQIELRVLAHI 666
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
+KD L+ D+ T A G +D V S R Q K + +GI+YG+ LS+
Sbjct: 667 AKDKGLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQN 725
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L + A E I+ + +SFPGV ++ V QKGYV +L R+R++ +I N +
Sbjct: 726 LGITRKAAGEFIEKYFASFPGVKEYMDEIVQEAKQKGYVSTLLNRRRYIPEITSRNFNLR 785
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
S A+R A+N+ QGSAADIIK AMI +A + + RLLLQVH
Sbjct: 786 SFAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVH 830
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+ EV +++ LV + ME A L VPL V G TW
Sbjct: 831 DELIFEVPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSSGPTW 873
>gi|229006922|ref|ZP_04164552.1| DNA polymerase I [Bacillus mycoides Rock1-4]
gi|228754322|gb|EEM03737.1| DNA polymerase I [Bacillus mycoides Rock1-4]
Length = 884
Score = 244 bits (622), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 276/583 (47%), Gaps = 81/583 (13%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + IQ G F D+
Sbjct: 373 EMRKYTFDAKRAIVALKWKGIEIQ-----------------GIYF------------DLL 403
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRA--AHNGCCRRVAQ 1714
I +++L P D ++ + K + E A + + +RA A + VA+
Sbjct: 404 IAAYLLDPAD---TDKDFRAVAKMK---ETHAVKSDEEVYGKGAKRAVPAQDIVAEHVAR 457
Query: 1715 TRALCSVLWKLLVSE----ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+ + K V E E E +E+PL VLA+ME+ G+ VD E + L
Sbjct: 458 KVHVLYDVQKTFVEELQKNEQYELFTELEMPLARVLAEMEVKGVTVDTERLRSMGDELAG 517
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 518 RLKEMEQEIYELAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLME 574
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
H I+P I +R L KL + + + + S +H + Q T TGRLS +PN
Sbjct: 575 HHEIIPKILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPN 630
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + +E + KI R FIPS+E W++ AADYSQIELR++AH
Sbjct: 631 LQNIPIRLE---------------EGRKI--RQAFIPSKEGWVMYAADYSQIELRVLAHI 673
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
+KD L+ D+ T A G +D V S R Q K + +GI+YG+ LS+
Sbjct: 674 AKDKGLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQN 732
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L + A E I+ + +SFPGV ++ V QKGYV +L R+R++ +I N +
Sbjct: 733 LGITRKAAGEFIEKYFASFPGVKEYMDEIVQEAKQKGYVSTLLNRRRYIPEITSRNFNLR 792
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
S A+R A+N+ QGSAADIIK AMI +A + + RLLLQVH
Sbjct: 793 SFAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVH 837
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+ EV +++ LV + ME A L VPL V G TW
Sbjct: 838 DELIFEVPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSSGPTW 880
>gi|449270812|gb|EMC81463.1| DNA polymerase nu, partial [Columba livia]
Length = 661
Score = 244 bits (622), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 323/654 (49%), Gaps = 98/654 (14%)
Query: 1565 YGSSDK--NVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRF 1622
Y S+D N + +L +K W + E E++ +KF W + Q + H V I F
Sbjct: 66 YSSTDSTWNAANEDDKLIYLKTAWSPLWE-QEQQAHKKFAWQVLFQ---MLHCKVPIICF 121
Query: 1623 GG-------LNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLE 1675
L + G + + V S +L D I +W++ P D + P+ E
Sbjct: 122 NAKDFLRTLLQVYGNEISWKQVADSVVL----------DPRIAAWLINPSD---TVPSFE 168
Query: 1676 KEVKK---------RLSSEAAAAANRS--------GRWKNQMRRAAHNGCCRRVAQTRAL 1718
++K ++++ A N S + N M AH+ Q + L
Sbjct: 169 CLIQKYFGKPFSMETVNTDTAPLRNTSYQNLGANLEKLYNVMMDLAHD------LQVQGL 222
Query: 1719 CSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKK 1778
WKL + +E+PL+ +LA ME I V+ + + +L +L+ LE++
Sbjct: 223 ----WKLFCT---------LELPLIKILAVMETHKIHVNKQELKKTSEILGLRLKELEQE 269
Query: 1779 AYTLAGMKFSLYTAADIANVLYGHLKLPI---PEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
A+ +AG +F L ++ + VL+ LKL + +Q ST + L+ L+ HP+
Sbjct: 270 AHQVAGERFLLTSSHQLREVLFEKLKLHTLCKKVHRTEIQQLVSTSEVVLNKLQDLHPLP 329
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV- 1894
+I E+R + K+ + + + + R K + W QT TATGRLS + PN+Q +
Sbjct: 330 KIILEYRQVHKMKSTYVDGLRTCMR------KGFISSTWNQTGTATGRLSAKHPNIQGIS 383
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
+H + + I G E+ I+ R F+ S++ + LAAD+S IELR++A S +P
Sbjct: 384 KHPIRI-TKKQYIKGKEEEI--VTISPRTLFV-SKKGYTFLAADFSHIELRILADLSSEP 439
Query: 1955 ALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
L+ L +P D+F+ +A++W G + V +R+Q KR++Y ++YG G L++ L
Sbjct: 440 ELLKLFQEPETTDIFSSLASQWKGIPSEQVKHADREQAKRIVYSVVYGAGKERLADCLGT 499
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
++ +A + I+SF + V + + C KGYV S+ GRKR L+ I + K +++A
Sbjct: 500 TTLQASQFIESFMQKYKKVYEFTKKTIEQCRNKGYVVSIMGRKRPLANINAQDYKLRTQA 559
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+RQAVN + QGSAAD+ K+AM+ I + +V +L A RL+ Q+HDEL
Sbjct: 560 ERQAVNFVVQGSAADLCKMAMVEIFTAVVVS-----PTLTA---------RLIAQIHDEL 605
Query: 2134 VLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLVKIQVGSTWGSLEPFQ 2180
+ EV+ S I+E +LV++ MES AL L VPL V + G +WG + Q
Sbjct: 606 LFEVEDSQIQEFSALVKRTMESLQQTTALEVPLKVPLKVILTTGKSWGCMTELQ 659
>gi|417844401|ref|ZP_12490445.1| DNA polymerase I [Haemophilus haemolyticus M21639]
gi|341956854|gb|EGT83270.1| DNA polymerase I [Haemophilus haemolyticus M21639]
Length = 935
Score = 244 bits (622), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 268/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E + +G+ K Q+ A
Sbjct: 449 FDTMLLSYTL----NSTGRHNIDDLAKRYLGHETIEFESIAGKGKGQLTFNQIPLEQATE 504
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L VLW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 505 YAAEDADVTMKLQQVLWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFIQS 564
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LE++AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 565 NEIAARLTALEEQAYELAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 622
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 623 EELAYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 678
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E++ ++AADYSQIELR
Sbjct: 679 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-ARESYSIIAADYSQIELR 720
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 721 IMAHLSGDQGLINAFSQGK-DIHRTTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 779
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +PGV ++ +GYVE+L GR+ +L I
Sbjct: 780 GLSRQLGISRPDAQKYMDLYFQRYPGVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSS 839
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + +I + PD +
Sbjct: 840 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEVI---RHDPD-------------IEM 883
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + + +++ ME+AA L+VPL+V++ VG W
Sbjct: 884 IMQVHDELVFEVRSEKVAFFLEQIKQNMEAAAELVVPLIVEVGVGQNW 931
>gi|444347338|ref|ZP_21155248.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|443548872|gb|ELT58000.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 966
Score = 244 bits (622), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 181/603 (30%), Positives = 289/603 (47%), Gaps = 103/603 (17%)
Query: 1626 NLVGTSLGLENVGSSFLLLSPVHL------------------------------------ 1649
NLVG S LEN +++L P+HL
Sbjct: 408 NLVGVSFALENGEAAYL---PLHLDYLGAPKTLEKTPHFLPLNRFWKTRTSAKSGKISSS 464
Query: 1650 -----KDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWK 1697
++GID+ ++S+ L + + N++ K+ L + + + +G+ K
Sbjct: 465 TTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISFEDIAGKGK 520
Query: 1698 NQMR------RAAHNGCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADME 1750
NQ+ A T L VLW KL L+E +IE+PL+ VL+ ME
Sbjct: 521 NQLTFNQIPLEQAGKYAAEDADVTMKLQQVLWQKLQPQPGLVELYQSIELPLLGVLSRME 580
Query: 1751 LWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG 1810
+G+ +D + N + ++L LE +A+TLAG F+L + + +L+ L LP+ +
Sbjct: 581 RYGVLIDSDALFLQSNEITERLTALEMQAHTLAGQPFNLASTKQLQEILFDKLGLPVLQK 640
Query: 1811 HNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL 1870
KG PST++ L+ L + H + V+ EHR L+KL + + + ++ Q +
Sbjct: 641 TPKGV--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM----VNPQTGRV 694
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQE 1930
H + Q TATGRLS +PNLQ + + NE R FI +++
Sbjct: 695 HTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIRQAFI-ARD 736
Query: 1931 NWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQ 1990
+ ++AADYSQIELR+MAH S D LI ++ D+ AA G + V S++R
Sbjct: 737 GYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQVTSEQRRN 795
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YGM LS QL S +A+ + + +P V +++H +GYVE
Sbjct: 796 AKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREKAKAQGYVE 855
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L GR+ +L +I N + A+R A+N+ QG+AADIIK AMI + G+ + D
Sbjct: 856 TLFGRRLYLPEINSSNAMRRKGAERVAINAPMQGTAADIIKRAMIKLD-----GITRDDP 910
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
+ +++QVHDELV EV I L+++ ME+AA L+VPL+V + VG
Sbjct: 911 DI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVPLIVDVGVG 959
Query: 2171 STW 2173
W
Sbjct: 960 ENW 962
>gi|373459016|ref|ZP_09550783.1| DNA polymerase I [Caldithrix abyssi DSM 13497]
gi|371720680|gb|EHO42451.1| DNA polymerase I [Caldithrix abyssi DSM 13497]
Length = 908
Score = 243 bits (621), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 198/701 (28%), Positives = 324/701 (46%), Gaps = 127/701 (18%)
Query: 1492 INASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLF---EIHGLAVCWENSPVYYVNL 1548
I + FD LD + EF FD+ S + F EI G++ CW+ Y+ L
Sbjct: 312 IESEEEFDRLLDTLKEQKEFVFDLE-------TSSLDFLEAEIAGISFCWDAGQASYIAL 364
Query: 1549 ---PKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNM 1605
P+ L D+N + +++ + +RK N+
Sbjct: 365 GHEPRGL----------------DRN------------KTLEKLRGVFADPQIRKIGQNI 396
Query: 1606 KVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPD 1665
K +++ V ++ NL D I S+++ P
Sbjct: 397 KYDAMIMEQHGVPVK-----NLY------------------------FDTMIASYLINP- 426
Query: 1666 DERSSNPNLEKEVKKRLSSEAAAAAN---RSGRWKNQMRRAA----HNGCCRRVAQTRAL 1718
+ NL+ + L+ + + + GR + +M A + C T +
Sbjct: 427 ---TGQHNLDYLAEHYLNYKMIPIEDLIGKKGRNQKKMTDLAAGLVYQYACEDADITYRI 483
Query: 1719 CSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKK 1778
+L K L + +E+P+V+VL ME+ G+ VD + + + L +K++ +E+K
Sbjct: 484 YQILKKDLKKHGMESLFYELEMPIVHVLMQMEMHGVKVDRKLLEELSDQLGRKIKAIEQK 543
Query: 1779 AYTLAGMKFSLYTAADIANVLYGHLKLPIPEG-----HNKGKQHPSTDKHCLDLLRH-EH 1832
Y AG +F+L + + +L+ L++ G K Q+ +++K L R+ H
Sbjct: 544 VYQAAGEEFNLNSPQQLGVILFDRLEIHKELGMRKPSKTKTGQYSTSEK---TLERYASH 600
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
P+V I E+R L KL + L ++ L I+ T K +H + QT TATGRLS PNLQ
Sbjct: 601 PLVADIMEYRKLIKLKSTYLDALPQL--INPRTGK--IHTSYNQTVTATGRLSSSNPNLQ 656
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ + + E R FIPS++++++L+ADYSQIELR+MAH S
Sbjct: 657 NIP--IRTDLGRE---------------IRRAFIPSKDDYLILSADYSQIELRIMAHLSG 699
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D +I K + D+ AA G S + V + R + K + +GI+YGM L+ +LN
Sbjct: 700 DETMISNFKK-NLDIHAATAALIFGISVEEVTADHRRKAKEINFGIIYGMSEYGLANRLN 758
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
S++EAKE I + +++P + ++ + +KGYVE++ GR+R+L +I+ N + +
Sbjct: 759 ISTDEAKEFIADYFATYPKIGEFMQRMIEEAREKGYVETMLGRRRYLPEIRNPNRQIREF 818
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAAD+IK AMI I + I + ++LLQVHDE
Sbjct: 819 AERTAINTPIQGSAADLIKKAMITIQTFIENVGFP---------------AQMLLQVHDE 863
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV EV E V++ ME A L VPL+V+ VG W
Sbjct: 864 LVFEVQKKRSDEFAKKVKEIMEGAMELRVPLVVECGVGPNW 904
>gi|416068114|ref|ZP_11582638.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype f
str. D18P1]
gi|348001358|gb|EGY42106.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype f
str. D18P1]
Length = 933
Score = 243 bits (621), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 278/551 (50%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 424 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 479
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPL 1742
+ +G+ KNQ+ A T L VLW+ L + + AL +IE+PL
Sbjct: 480 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWEKLEPQPGLVALYQSIELPL 539
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
++VL+ ME G+ +D + N + ++L LE +AY LAG F+L + + +L+G
Sbjct: 540 LSVLSRMERCGVLIDSDALFLQSNEITERLTALEMQAYALAGQPFNLASTKQLQEILFGK 599
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 600 LGLPVLQKTPKGA--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 653
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 654 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 696
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 697 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 754
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 755 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 814
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + A+R A+N+ QG+AADIIK AMI +
Sbjct: 815 AKAQGYVETLFGRRLYLPEINSSNAMRRKGAERVAINAPMQGTAADIIKRAMIKLD---- 870
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 871 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVP 918
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 919 LIVDVGVGENW 929
>gi|149182832|ref|ZP_01861293.1| DNA polymerase I [Bacillus sp. SG-1]
gi|148849447|gb|EDL63636.1| DNA polymerase I [Bacillus sp. SG-1]
Length = 875
Score = 243 bits (621), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 265/523 (50%), Gaps = 44/523 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRL--SSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D+ IVS+IL P + + K+ + S EA + + + A H R
Sbjct: 391 FDLLIVSYILNPAESADDFAGVAKKHGASVIESDEAVYGKGAKRKVPEEEKLAEH--LAR 448
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+ L S + L + + ++E+PL +LADME G+GVD++ + ++ L +
Sbjct: 449 KANVVYELKSTCEEALKENDQYQLFTDLELPLAIILADMEYTGVGVDVDRLKEMKSELAE 508
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+L +EKK Y LAG +F++ + + +L+ L+LP+ + K K ST L+ L+
Sbjct: 509 RLDEMEKKIYELAGEEFNINSPKQLGVILFEKLELPVIK---KTKTGYSTSADVLEKLQS 565
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
+H I+ I +R L KL + + + + I + K +H + Q T TGRLS +PN
Sbjct: 566 KHEIIDHILHYRQLGKLQSTYIEGLLKV--IHEDSNK--VHTRFNQALTQTGRLSSTDPN 621
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + +E + KI R FIPS++NW++ AADYSQIELR++AH
Sbjct: 622 LQNIPIRLE---------------EGRKI--RQAFIPSEKNWLMFAADYSQIELRVLAHI 664
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
+ D LI ++ D+ T A DSV S R K + +GI+YG+ LS+
Sbjct: 665 AGDEKLIHAFNEGM-DIHTKTAMDVFHVDADSVTSNMRRHAKAVNFGIVYGISDFGLSQS 723
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L + EA E I+ + S+PGV ++ +S Q G+V++L R+R++ +I N +
Sbjct: 724 LGITRKEAGEFIQRYLDSYPGVQEYMDDIISEAKQNGFVKTLLQRRRYIPEITSRNFNLR 783
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
S A+R A+N+ QGSAADIIK AMI+ +AA + + RLLLQVH
Sbjct: 784 SFAERTAMNTPIQGSAADIIKKAMID---------------MAARLEKENLQTRLLLQVH 828
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+ E I+ +V + ME+A L VPL V G TW
Sbjct: 829 DELIFEAPEDEIERLKEIVPEVMENAVELEVPLKVDYSYGPTW 871
>gi|334341036|ref|YP_004546016.1| DNA polymerase I [Desulfotomaculum ruminis DSM 2154]
gi|334092390|gb|AEG60730.1| DNA polymerase I [Desulfotomaculum ruminis DSM 2154]
Length = 878
Score = 243 bits (621), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 236/442 (53%), Gaps = 40/442 (9%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA+ME+ GI VD + + LQ+ + L + LAG +F++ + +
Sbjct: 477 VELPLISVLANMEIAGITVDQQQLKEISAELQEAIEALATLIHHLAGEEFNINSTRQLGQ 536
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKLP+ + K K STD L+ L EH IV V+ E+R L KL + + +
Sbjct: 537 ILFDKLKLPV---YKKTKTGYSTDAEVLEKLAEEHEIVSVLLEYRQLTKLKSTYADGLAA 593
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
L + Q LH + QT TATGRLS EPNLQ + +E S I
Sbjct: 594 L----VDPQTKRLHSTFHQTVTATGRLSSAEPNLQNIPIRLE---SGRRI---------- 636
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R F+P Q ++L ADYSQIELR++AH S+D + + + D+ T A+ G
Sbjct: 637 ----RKVFVPRQRGNLILTADYSQIELRILAHVSQDASFLDAFRQGQ-DIHTRTASEVFG 691
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
S D V Q R + K + +GI+YG+ L+ L S EAK I S+ + PG+ +++H
Sbjct: 692 VSMDEVTPQLRGRAKAVNFGIVYGISDFGLARDLRVSRKEAKSYIDSYFARCPGIQNYIH 751
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
+ ++GYV +L R+R+L ++ N +S +R A+N+ QG+AADIIK+AM+ +
Sbjct: 752 RVIQEAKEQGYVTTLLNRRRYLPELFSSNYNIRSFGERAAMNTPIQGTAADIIKMAMVRV 811
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA 2157
H + + +++LQVHDEL+ +V +++ +LV++ MESA
Sbjct: 812 HQ---------------ELREQDLKAKMVLQVHDELIFDVPEQEVEKLAALVRQYMESAL 856
Query: 2158 LLLVPLLVKIQVGSTWGSLEPF 2179
+ VPL+V I++G W P
Sbjct: 857 QMDVPLVVDIKIGPNWYDKRPL 878
>gi|319897650|ref|YP_004135847.1| DNA polymerase i [Haemophilus influenzae F3031]
gi|317433156|emb|CBY81530.1| DNA polymerase I [Haemophilus influenzae F3031]
Length = 935
Score = 243 bits (621), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 266/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K Q+ A
Sbjct: 449 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESIAGKGKGQLTFNQIPLEQATE 504
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 505 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFMQS 564
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 565 NEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 622
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 623 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 678
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 679 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 720
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 721 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 779
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ + +GYVE+L GR+ +L I
Sbjct: 780 GLSRQLGISRADAQKYMNLYFQRYPSVQQFMTDIRAKAKAQGYVETLFGRRLYLPDINSS 839
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI I +I + PD +
Sbjct: 840 NAMRRKGAERVAINAPMQGTAADIIKRAMIKIDEVI---RHDPD-------------IEM 883
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 884 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAELVVPLIVEVGVGQNW 931
>gi|68249450|ref|YP_248562.1| DNA polymerase I [Haemophilus influenzae 86-028NP]
gi|68057649|gb|AAX87902.1| DNA polymerase I [Haemophilus influenzae 86-028NP]
Length = 930
Score = 243 bits (621), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 266/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ KNQ+ A
Sbjct: 444 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESIAGKGKNQLTFNQIPLEQATE 499
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D
Sbjct: 500 YAAEDADVTMKLQQALWLKLQQEPTLVELYKTMELPLLHVLSRMERTGVLIDSNALFMQS 559
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LE++AY LAG F+L + + +L+ L LPI + KG PST++ L
Sbjct: 560 NEIATRLTALEEQAYELAGQPFNLASTKQLQEILFDKLGLPILQKTPKGA--PSTNEEVL 617
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 618 EELAYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 673
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 674 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 715
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 716 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 774
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL+ S +AK+ + + +P V ++ +GYVE+L GR+ +L I
Sbjct: 775 GLSRQLDISRPDAKKYMDLYFQRYPSVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSS 834
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + +I + PD +
Sbjct: 835 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEVI---YHDPD-------------IEM 878
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV ++ +++ ME A+ L+VPL+V++ VG W
Sbjct: 879 IMQVHDELVFEVRSEKVEFFREQIKQQMEDASELVVPLIVEVGVGQNW 926
>gi|251793585|ref|YP_003008314.1| DNA polymerase I [Aggregatibacter aphrophilus NJ8700]
gi|422337267|ref|ZP_16418238.1| DNA polymerase I [Aggregatibacter aphrophilus F0387]
gi|247534981|gb|ACS98227.1| DNA polymerase I (POL I) [Aggregatibacter aphrophilus NJ8700]
gi|353345481|gb|EHB89773.1| DNA polymerase I [Aggregatibacter aphrophilus F0387]
Length = 985
Score = 243 bits (621), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 267/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + + N++ K+ L + + +G+ KNQ+ A
Sbjct: 499 FDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTIGFEDIAGKGKNQLTFNQIPLEQAGE 554
Query: 1707 GCCRRVAQTRALCSVLWKLLVSE-ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L VLW+ L S+ L+E +IE+PL+ VL+ ME G+ +D +
Sbjct: 555 YAAEDADVTMKLQQVLWEKLKSQPSLVELYQSIELPLLGVLSRMERCGVLIDSDALFLQS 614
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + ++L LE +A+ LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 615 NEITERLTALEMQAHELAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 672
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + V+ EHR L+KL + + + ++ Q +H + Q TATGRLS
Sbjct: 673 EELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM----VNPQTGRVHTSYHQAVTATGRLS 728
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ R FI +++ + ++AADYSQIELR
Sbjct: 729 SSDPNLQNI------PIRNEE-----------GRRIRQAFI-ARDGYKIIAADYSQIELR 770
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI ++ D+ AA G + V S++R K + +G++YGM
Sbjct: 771 IMAHLSNDAGLINAFAQGK-DIHRSTAAELFGLPLEQVTSEQRRNAKAINFGLIYGMSSF 829
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A+ + + +PGV +++H +GYVE+L GR+ +L +I
Sbjct: 830 GLSRQLGISRADAQRYMDLYFQRYPGVQTFMHDIREKAKAQGYVETLFGRRLYLPEINSS 889
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + I PD +
Sbjct: 890 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEITRD---DPD-------------IHM 933
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV I L+++ ME+AA L+VPL+V + VG W
Sbjct: 934 IMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVPLIVDVGVGENW 981
>gi|448748354|ref|ZP_21729991.1| DNA polymerase 1 [Halomonas titanicae BH1]
gi|445564056|gb|ELY20186.1| DNA polymerase 1 [Halomonas titanicae BH1]
Length = 931
Score = 243 bits (621), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 202/680 (29%), Positives = 320/680 (47%), Gaps = 98/680 (14%)
Query: 1498 FDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHR 1557
F+ +LDR + F FD+ + ++ EI G+ + E Y+ L D +
Sbjct: 342 FERWLDRLQNAERFCFDLETTSLNYMDA----EIVGVGLSLEVGEAAYIPLAHDYLDAPK 397
Query: 1558 RKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAV 1617
+ DR K VL + ++E K N+K I VL + A+
Sbjct: 398 QLDR--------KTVLAA-------------LKPLLEDPTKTKIGQNLKYDISVLANYAI 436
Query: 1618 SIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKE 1677
S V F D + S++L R +L +
Sbjct: 437 S------------------VAGPF-----------ADTMLASYVLNSTATRHDMDSLALK 467
Query: 1678 V--KKRLSSEAAAAANRSGRWKNQMR-RAAHNGCCRRVAQTRALCSVLWKLLVSE-ELIE 1733
+K +S E A NQ+ A C V T L L + +E L E
Sbjct: 468 YLGEKTISFEEIAGKGAKQLTFNQIALEQAAPYACEDVDITLRLQQTLRSQVENEGRLAE 527
Query: 1734 ALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAA 1793
L NIE+PL+ VL+ +E G+ VD + + L+K++ LE++A+ LAG +F+L +
Sbjct: 528 VLDNIELPLIKVLSRIERNGVAVDADLLHKQSQQLEKRIGELEREAFELAGREFNLGSPK 587
Query: 1794 DIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLG 1853
+ +L+ K+P+ + KG PST + L+ L ++P+ VI +HR LAKL +
Sbjct: 588 QLGQILFEEQKIPVLKKTPKGA--PSTAEGVLEELALDYPLPKVIMQHRGLAKLKSTYTD 645
Query: 1854 SICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAE 1913
+ L ++ +T + +H + Q TATGRLS +PNLQ + E
Sbjct: 646 KLPRL--LNKATGR--VHTSYHQAVTATGRLSSSDPNLQNIPIRTE-------------- 687
Query: 1914 VDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAA 1973
+ KI R FI ++ + ++AADYSQIELR+MAH S+D L+ ++ D+ T AA
Sbjct: 688 -EGRKI--RQAFI-ARPGYRIVAADYSQIELRIMAHLSEDKGLLEAFAEGR-DIHTATAA 742
Query: 1974 RWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVA 2033
G S D V +R K + +G++YGM LS QL+ N+A+ I + +PGVA
Sbjct: 743 EVFGTSLDKVSGDQRRSAKAINFGLIYGMSAWGLSRQLHIERNQAQTYIDRYFDRYPGVA 802
Query: 2034 SWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIA 2093
++ S + G+VE++ GR+ +L +I+ N + A+R A+N+ QG+AADIIK A
Sbjct: 803 RYMERIRSQAGEDGFVETVLGRRLYLPEIQSQNRNRRQGAERTAINAPMQGTAADIIKQA 862
Query: 2094 MINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCM 2153
MI++ + + G F L +++QVHDELV EV ++ + VQK M
Sbjct: 863 MIDVDAWLAEG----------EFDAL-----MVMQVHDELVFEVAEKQVEAFIEQVQKRM 907
Query: 2154 ESAALLLVPLLVKIQVGSTW 2173
+ AA L VPL+V+ + G+ W
Sbjct: 908 QGAAALKVPLIVEAESGANW 927
>gi|315633357|ref|ZP_07888648.1| DNA-directed DNA polymerase I [Aggregatibacter segnis ATCC 33393]
gi|315477857|gb|EFU68598.1| DNA-directed DNA polymerase I [Aggregatibacter segnis ATCC 33393]
Length = 950
Score = 243 bits (621), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 266/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + + N++ K+ L + + +G+ KNQ+ A
Sbjct: 464 FDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTIGFEDIAGKGKNQLTFNQIPLEQAGE 519
Query: 1707 GCCRRVAQTRALCSVLWKLLVSE-ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L VLW L S+ L+E +IE+PL+ VL+ ME G+ +D +
Sbjct: 520 YAAEDADVTMKLQQVLWGKLQSQPSLVELYQSIELPLLGVLSRMERCGVLIDSDALFLQS 579
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + ++L LE +A+ LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 580 NEITERLTALEMQAHELAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEDVL 637
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + V+ EHR L+KL + + + ++ Q +H + Q TATGRLS
Sbjct: 638 EELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM----VNPQTGRVHTSYHQAVTATGRLS 693
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ R FI +++ + ++AADYSQIELR
Sbjct: 694 SSDPNLQNI------PIRNEE-----------GRRIRQAFI-ARDGYKIIAADYSQIELR 735
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI ++ D+ AA G + V S++R K + +G++YGM
Sbjct: 736 IMAHLSNDAGLINAFAQGK-DIHRSTAAEIFGLPLEQVTSEQRRNAKAINFGLIYGMSSF 794
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A+ + + +PGV +++H +GYVE+L GR+ +L +I
Sbjct: 795 GLSRQLGISRADAQRYMDLYFQRYPGVQTFMHDIREKAKAQGYVETLFGRRLYLPEINSS 854
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + I PD +
Sbjct: 855 NAMRRKGAERVAINAPMQGTAADIIKCAMIKLDEITRD---DPD-------------IHM 898
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV I L+++ ME+AA L+VPL+V + VG W
Sbjct: 899 IMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVPLIVDVGVGENW 946
>gi|145630606|ref|ZP_01786386.1| DNA polymerase I [Haemophilus influenzae R3021]
gi|144983996|gb|EDJ91438.1| DNA polymerase I [Haemophilus influenzae R3021]
Length = 743
Score = 243 bits (621), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 267/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 257 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLEQATE 312
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 313 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFIQS 372
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 373 NEIATRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 430
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 431 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 486
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 487 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 528
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 529 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 587
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ + +GYVE+L GR+ +L I
Sbjct: 588 GLSRQLGISRPDAQKYMDLYFQRYPSVQQFMTDIRAKAKAQGYVETLFGRRLYLPDINSS 647
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI I +I + PD +
Sbjct: 648 NAMRRKGAERVAINAPMQGTAADIIKRAMIKIDEVI---RHDPD-------------IEM 691
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 692 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAELVVPLIVEVGVGKNW 739
>gi|229013790|ref|ZP_04170918.1| DNA polymerase I [Bacillus mycoides DSM 2048]
gi|228747459|gb|EEL97334.1| DNA polymerase I [Bacillus mycoides DSM 2048]
Length = 891
Score = 243 bits (620), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 269/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 380 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFLEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDRHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + DP
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDPG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ + D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVEAF-RHDMDIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QGSAADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|423591440|ref|ZP_17567471.1| DNA polymerase I [Bacillus cereus VD048]
gi|423598120|ref|ZP_17574120.1| DNA polymerase I [Bacillus cereus VD078]
gi|401232808|gb|EJR39306.1| DNA polymerase I [Bacillus cereus VD048]
gi|401237581|gb|EJR44032.1| DNA polymerase I [Bacillus cereus VD078]
Length = 877
Score = 243 bits (620), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 366 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFLEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDRHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + DP
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDPG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QGSAADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|345428767|ref|YP_004821883.1| fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5'
exonuclease [Haemophilus parainfluenzae T3T1]
gi|301154826|emb|CBW14289.1| fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5'
exonuclease [Haemophilus parainfluenzae T3T1]
Length = 932
Score = 243 bits (620), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 172/554 (31%), Positives = 276/554 (49%), Gaps = 59/554 (10%)
Query: 1634 LENVGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEA 1686
++ VG +F + ++GID+ + S++L + N++ K+ L +
Sbjct: 420 IQKVGQNFKYDLTIFARNGIDVQGVAFDTMLESYVL----NSTGRHNMDDLAKRYLGHQT 475
Query: 1687 AAAANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLN-IE 1739
+ +G+ KNQ+ A T L VLW+ L E +E L +E
Sbjct: 476 ISFEEIAGKGKNQLTFNQIQLEQAAEYAAEDADVTMKLQQVLWEKLSKEPTLEKLFKEME 535
Query: 1740 IPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVL 1799
+PL+ VL+ ME G+ +D + N + +L LE++AY LAG F+L + + +L
Sbjct: 536 LPLLGVLSRMERRGVLIDSDALFLQSNEIANRLSELEEQAYVLAGQPFNLASTKQLQEIL 595
Query: 1800 YGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLA 1859
+ L LP+ + KG PST++ L+ L H + V+ EHR L+KL + + +
Sbjct: 596 FDKLGLPVIQKTPKGA--PSTNEEVLEELAFSHELPKVLVEHRGLSKLKSTYTDKLPQM- 652
Query: 1860 RISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKI 1919
++ Q +H + Q TATGRLS +PNLQ + + NE+
Sbjct: 653 ---VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNEE-----------GR 692
Query: 1920 NARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRS 1979
R FI ++E + ++AADYSQIELR+MAH S+D LI ++ D+ AA G +
Sbjct: 693 RIRQAFI-AREGFTVVAADYSQIELRIMAHLSQDQGLINAFTQGK-DIHRSTAAEIFGVA 750
Query: 1980 EDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVA 2039
D V S++R K + +G++YGM LS QL+ +A+ + + +PGV +++H
Sbjct: 751 LDEVTSEQRRNAKAINFGLIYGMSAFGLSRQLSIGRADAQSYMDLYFKRYPGVQTFMHDI 810
Query: 2040 VSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHS 2099
+GYVE+L GR+ +L I N + A+R A+N+ QG+AADIIK AMI +
Sbjct: 811 REKAKAQGYVETLFGRRLYLPDINSSNGMRRKAAERVAINAPMQGTAADIIKRAMIQLDQ 870
Query: 2100 IIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALL 2159
+ PD +++QVHDELV EV ++ L++ MESAA L
Sbjct: 871 KLQN---DPD-------------IAMIMQVHDELVFEVRSEKVEFYSKLIKTHMESAADL 914
Query: 2160 LVPLLVKIQVGSTW 2173
+VPL+V + G+ W
Sbjct: 915 VVPLIVDVGQGTNW 928
>gi|229169313|ref|ZP_04297023.1| DNA polymerase I [Bacillus cereus AH621]
gi|228614076|gb|EEK71191.1| DNA polymerase I [Bacillus cereus AH621]
Length = 891
Score = 243 bits (620), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 380 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFLEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDRHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + DP
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDPG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QGSAADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|229062271|ref|ZP_04199592.1| DNA polymerase I [Bacillus cereus AH603]
gi|228716999|gb|EEL68680.1| DNA polymerase I [Bacillus cereus AH603]
Length = 838
Score = 243 bits (620), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 265/579 (45%), Gaps = 73/579 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 327 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 357
Query: 1657 IVSWILWPDDERSSNPNLEK--EVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQ 1714
I +++L P D + K E S E Q A H R+V
Sbjct: 358 IAAYLLDPADTDKDFRAVAKMKETHAVKSDEEVYGKGAKRAVPEQEVVAEH--VARKVHV 415
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
+ + + L E E +E+PL VLADME+ G+ VD E L +L+
Sbjct: 416 LYDVKQIFEEELEKNEQYELFTELELPLARVLADMEVKGVTVDTERLRNMGEELAGRLKE 475
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
+E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I
Sbjct: 476 MEQEIYELAGTEFNINSPKQLGVILFENLNLPVLK---KTKTGYSTSADVLDKLMDHHAI 532
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
+P I +R L KL + + + + S +H + Q T TGRLS EPNLQ +
Sbjct: 533 IPKILHYRQLGKLNSTYIEGLLKVVHDDSSK----IHTRFNQVLTQTGRLSSTEPNLQNI 588
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
+E + KI R FIPS+E WI+ AADYSQIELR++AH +KD
Sbjct: 589 PIRLE---------------EGRKI--RQAFIPSEEGWIMYAADYSQIELRVLAHIAKDE 631
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 632 GLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGIT 690
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+
Sbjct: 691 RKAAGEFIERYLESFPGVQEYMADIVKDAKQKGYVSTLLNRRRYIPEITSRNFNLRSFAE 750
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
R A+N+ QGSAADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 751 RTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELI 795
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E +++ LV + ME A L VPL V G TW
Sbjct: 796 FEAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 834
>gi|423512686|ref|ZP_17489217.1| DNA polymerase I [Bacillus cereus HuA2-1]
gi|402447610|gb|EJV79460.1| DNA polymerase I [Bacillus cereus HuA2-1]
Length = 877
Score = 243 bits (619), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 366 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-IARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFLEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDRHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + DP
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDPG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QGSAADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|16272796|ref|NP_439016.1| DNA polymerase I [Haemophilus influenzae Rd KW20]
gi|260579947|ref|ZP_05847777.1| DNA-directed DNA polymerase I [Haemophilus influenzae RdAW]
gi|1169402|sp|P43741.1|DPO1_HAEIN RecName: Full=DNA polymerase I; Short=POL I
gi|1573871|gb|AAC22515.1| DNA polymerase I (polA) [Haemophilus influenzae Rd KW20]
gi|260093231|gb|EEW77164.1| DNA-directed DNA polymerase I [Haemophilus influenzae RdAW]
Length = 930
Score = 243 bits (619), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 266/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 444 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLEQATE 499
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 500 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFMQS 559
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L+LP+ + KG PST++ L
Sbjct: 560 NEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLELPVLQKTPKGA--PSTNEEVL 617
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ +HR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 618 EELSYSHELPKILVKHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 673
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ +I N E H R FI ++E + ++AADYSQIELR
Sbjct: 674 SSDPNLQ-------------NIPIRNEEGRHI----RQAFI-AREGYSIVAADYSQIELR 715
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 716 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 774
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ +GYVE+L GR+ +L I
Sbjct: 775 GLSRQLGISRADAQKYMDLYFQRYPSVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSS 834
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + +I + PD +
Sbjct: 835 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEVI---RHDPD-------------IEM 878
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 879 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAELVVPLIVEVGVGQNW 926
>gi|435849690|ref|YP_007301631.1| superfamily II helicase [Methanomethylovorans hollandica DSM 15978]
gi|433663178|gb|AGB50603.1| superfamily II helicase [Methanomethylovorans hollandica DSM 15978]
Length = 769
Score = 243 bits (619), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 181/571 (31%), Positives = 291/571 (50%), Gaps = 60/571 (10%)
Query: 509 LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCA-STSAGKSFVAEILMLRRLI 567
LP Y +G + LYP Q EC+ G+L+ +N V+CA T++GK+F+AE+ ML+ I
Sbjct: 8 LPQNYIDFYLNKGYTTLYPPQAECME-KGLLKGKN-VFCAIPTASGKTFLAELAMLKA-I 64
Query: 568 STGKMALLVLPYVSICAEKAEHLEVLLEPLGRH--VRSYYGNQGGGSLPKDTSVAVCTIE 625
S GK A+ ++P ++ EK + + PLG + + S N L K ++ VCT E
Sbjct: 65 SKGKKAMYIVPLRALAKEKYTSFKDFV-PLGINPGIASGDYNTDNRWLEK-CNIIVCTAE 122
Query: 626 KANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGE 685
KA+SL+ E + ++ +VIDE+H++A + RG LE++ TKLR +
Sbjct: 123 KADSLLRS--EASWIDDVTCVVIDEVHLLACKTRGPTLEMVTTKLREKNSQ--------- 171
Query: 686 NSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYS 745
+Q V +SAT+ N VA WLQ+ L T++RP L E I N I
Sbjct: 172 --------------IQFVSLSATVGNAEEVARWLQSELITTDWRPADLREGIFFQNKIQF 217
Query: 746 KKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKK 805
K + +T DP + + + V G L+F +SR C A+ +SK +
Sbjct: 218 SKYSIDINPIT------NDPS--INIAIDTVNIGGQCLVFETSRNSCSDFAKKLSKHISP 269
Query: 806 FSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCY 865
+ E ++ +D + +P+L E + +GVA+HHAGL ++R++VE+ +
Sbjct: 270 LI--TEKNREELNKLSIELDREEQS----NPILSECIRNGVAFHHAGLNEKQRDIVESGF 323
Query: 866 RKGLVRVLTATSTLAAGVNLPARRVIFR-----QPRIGRDFIDGTRYRQMAGRAGRTGID 920
+ GL++++T T TLAAG+NLPARRVI R P GR I Y+QMAGRAGR +D
Sbjct: 324 KNGLIKIITCTPTLAAGLNLPARRVIIRNYKRFNPGQGRCPIPVLDYKQMAGRAGRPHLD 383
Query: 921 TKGESMLICKPE-EVKKIMG-LLNESCPPLHSCLSEDKNGMTHAILEVVAGGIVQTAEDI 978
GES+LI + E +++K+ +N + S L+++ + TH +L + T EDI
Sbjct: 384 PYGESVLIAESEKDIEKLKATFINAQAELVISNLAQENHFETH-LLATINNKFANTLEDI 442
Query: 979 HRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCP 1038
+ ++R TL P D ++ L RK +E + + +TP G+ + P
Sbjct: 443 NHFLRKTLFGFQNPDADFENLTTKCIKVLHRRKMIEICDRIE---STPFGKMVSVVYIYP 499
Query: 1039 EESLIVLDDLSRAREGFVLASDLHLVYLSTP 1069
E + I+ + ++ F+ +L + STP
Sbjct: 500 ETASIITSKIEKSL--FITPFNLMSIICSTP 528
>gi|325577646|ref|ZP_08147921.1| DNA-directed DNA polymerase I [Haemophilus parainfluenzae ATCC 33392]
gi|325160391|gb|EGC72517.1| DNA-directed DNA polymerase I [Haemophilus parainfluenzae ATCC 33392]
Length = 932
Score = 243 bits (619), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 172/555 (30%), Positives = 276/555 (49%), Gaps = 59/555 (10%)
Query: 1633 GLENVGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSE 1685
++ VG +F + ++GID+ + S++L + N++ K+ L +
Sbjct: 419 AIQKVGQNFKYDLTIFARNGIDVQGVAFDTMLESYVL----NSTGRHNMDDLAKRYLGHQ 474
Query: 1686 AAAAANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLN-I 1738
+G+ KNQ+ A T L VLW+ L E +E L +
Sbjct: 475 TITFEEIAGKGKNQLTFNQIPLEKAAEYAAEDADVTMKLQQVLWEKLSKEPTLEKLFKEM 534
Query: 1739 EIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANV 1798
E+PL+ VL+ ME G+ +D + N + +L LE++AY LAG F+L + + +
Sbjct: 535 ELPLLGVLSRMERRGVLIDSDALFLQSNEIANRLSELEEQAYVLAGQPFNLASTKQLQEI 594
Query: 1799 LYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSL 1858
L+ L LP+ + KG PST++ L+ L H + V+ EHR L+KL + + +
Sbjct: 595 LFDKLGLPVIQKTPKGA--PSTNEEVLEELAFSHELPKVLVEHRGLSKLKSTYTDKLPQM 652
Query: 1859 ARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCK 1918
++ Q +H + Q TATGRLS +PNLQ + + NE+
Sbjct: 653 ----VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNEE-----------G 691
Query: 1919 INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGR 1978
R FI ++E + ++AADYSQIELR+MAH S+D LI ++ D+ AA G
Sbjct: 692 RRIRQAFI-AREGFTVVAADYSQIELRIMAHLSQDQGLINAFTQGK-DIHRSTAAEIFGV 749
Query: 1979 SEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHV 2038
+ D V S++R K + +G++YGM LS QL +A+ + + +PGV +++H
Sbjct: 750 ALDEVTSEQRRNAKAINFGLIYGMSAFGLSRQLGIGRADAQSYMDLYFKRYPGVQTFMHD 809
Query: 2039 AVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIH 2098
+GYVE+L GR+ +L I N + A+R A+N+ QG+AADIIK AMI +
Sbjct: 810 IREKAKAQGYVETLFGRRLYLPDINSSNGMRRKAAERVAINAPMQGTAADIIKRAMIQLD 869
Query: 2099 SIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAAL 2158
+ + D +A +++QVHDELV EV ++ L++ MESAA
Sbjct: 870 QKL-----QNDPDIA-----------MIMQVHDELVFEVRSEKVEFYSKLIKTHMESAAD 913
Query: 2159 LLVPLLVKIQVGSTW 2173
L+VPL+V + G+ W
Sbjct: 914 LVVPLIVDVGQGTNW 928
>gi|376261726|ref|YP_005148446.1| DNA polymerase I [Clostridium sp. BNL1100]
gi|373945720|gb|AEY66641.1| DNA polymerase I [Clostridium sp. BNL1100]
Length = 896
Score = 243 bits (619), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 176/588 (29%), Positives = 290/588 (49%), Gaps = 71/588 (12%)
Query: 1587 KRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSP 1646
K + EI E +D+ K+ ++K + LK + + LENV
Sbjct: 375 KELREIFESKDIEKYGHDLKNLYKYLKSSGIE---------------LENVV-------- 411
Query: 1647 VHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRR-AAH 1705
D I ++IL P + L ++ K+ + ++ G+ +Q + ++
Sbjct: 412 ------FDTFIAAYILEPTRSTYTISELSEDKLKQSITPVEVLYDKHGKRLDQEQDISSS 465
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
C V L L ++ E IE+PLV VLADMEL G VD+EG
Sbjct: 466 EVCAAAVNAIFGLTQKLRPIIRDNGQDELYYKIELPLVEVLADMELRGFKVDVEGLKAYS 525
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
+ +L LE + Y AG F++ + + +L+ L LP+ + K K ST L
Sbjct: 526 KEMDSRLVILENEIYMQAGETFNINSPKQLGVILFEKLGLPVGK---KTKTGYSTSAEVL 582
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L ++H IV I E+R L KL S + +S+ Q +H ++ QT TATGR+S
Sbjct: 583 EQLSYKHEIVERILEYRQLMKL-----KSTYADGLLSVLEQDGKIHSNFNQTVTATGRIS 637
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
EPNLQ + V+ +M + R FIP+ ++++LL ADYSQIELR
Sbjct: 638 STEPNLQNIP--VKLEMGRK---------------IRKVFIPTNQDYVLLDADYSQIELR 680
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
++AH + DP +I K + D+ T A++ G + V S R + K + +GI+YG+G
Sbjct: 681 VLAHITDDPNMIEAFLK-NEDIHTTTASKVFGIPPEEVSSLMRSRAKAVNFGIVYGIGDF 739
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
+LS+ + + EA++ I + + V ++ V + G+V +L R+R+L ++K
Sbjct: 740 SLSKDIGVTKKEARQYIDDYLDKYSKVKEYMSDTVEKGKEFGFVTTLYSRRRYLPELKSS 799
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S +R A+N+ QGSAADIIKI+M+ +++ + K + +L
Sbjct: 800 NFNMRSFGERVAMNTPIQGSAADIIKISMVKVYN---------------ELKKRKLKSKL 844
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+LQVHDEL++E + S ++E +++ CME+A L VPL V ++ G +W
Sbjct: 845 ILQVHDELIVETEKSELEEVSKVLKDCMENAVQLKVPLTVDVKHGDSW 892
>gi|148828039|ref|YP_001292792.1| DNA polymerase I [Haemophilus influenzae PittGG]
gi|148719281|gb|ABR00409.1| DNA polymerase I [Haemophilus influenzae PittGG]
Length = 930
Score = 243 bits (619), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 267/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 444 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLEQATE 499
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 500 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFMQS 559
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 560 NEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 617
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 618 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 673
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI +++ + ++AADYSQIELR
Sbjct: 674 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-ARKGYSIVAADYSQIELR 715
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 716 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 774
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ + +GYVE+L GR+ +L I
Sbjct: 775 GLSRQLGISRADAQKYMNLYFQRYPSVQQFMTDIRAKAKAQGYVETLFGRRLYLPDINSS 834
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI I +I + PD +
Sbjct: 835 NAMRRKGAERVAINAPMQGTAADIIKRAMIKIDEVI---RHDPD-------------IEM 878
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 879 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAELVVPLIVEVGVGQNW 926
>gi|423489750|ref|ZP_17466432.1| DNA polymerase I [Bacillus cereus BtB2-4]
gi|423495473|ref|ZP_17472117.1| DNA polymerase I [Bacillus cereus CER057]
gi|423497732|ref|ZP_17474349.1| DNA polymerase I [Bacillus cereus CER074]
gi|401150380|gb|EJQ57839.1| DNA polymerase I [Bacillus cereus CER057]
gi|401162212|gb|EJQ69570.1| DNA polymerase I [Bacillus cereus CER074]
gi|402431041|gb|EJV63113.1| DNA polymerase I [Bacillus cereus BtB2-4]
Length = 877
Score = 243 bits (619), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 184/582 (31%), Positives = 265/582 (45%), Gaps = 79/582 (13%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 366 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGC-----CRR 1711
I +++L P D + K + A ++ K R G R+
Sbjct: 397 IAAYLLDPADTDKDFRTVAK-----MKETHAVKSDEEVYGKGAKRAVPELGVVAEHVARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFLEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGIILFENLNLPVIK---KTKTGYSTSADVLDKLMDR 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
DP L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDPGLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QGSAADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|229135422|ref|ZP_04264209.1| DNA polymerase I [Bacillus cereus BDRD-ST196]
gi|228647983|gb|EEL04031.1| DNA polymerase I [Bacillus cereus BDRD-ST196]
Length = 891
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 232/466 (49%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+V + + L E E +E+PL VLADME+ G+ VD +
Sbjct: 462 VARKVHVLYDVKQTFLEELKKNEQYELFTELELPLARVLADMEVKGVKVDTDRLRNMGEE 521
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L +L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD
Sbjct: 522 LAGRLKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDK 578
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H I+P I +R L KL + + + + S +H + Q T TGRLS
Sbjct: 579 LMDRHEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSST 634
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R F+PS+E WI+ AADYSQIELR++
Sbjct: 635 DPNLQNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVL 677
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH +KDP L+ D+ T A G +D V S R Q K + +GI+YG+ L
Sbjct: 678 AHIAKDPGLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGL 736
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S+ L + A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N
Sbjct: 737 SQNLGITRKAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNF 796
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI +A + + RLLL
Sbjct: 797 NLRSFAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLL 841
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+ E I++ LV + ME A L VPL V G TW
Sbjct: 842 QVHDELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|82395938|gb|ABB72056.1| thermostable DNA polymerase I [Geobacillus sp. MKK-2005]
Length = 876
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 187/561 (33%), Positives = 277/561 (49%), Gaps = 62/561 (11%)
Query: 1613 KHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNP 1672
K AAV++ ++ G+ L G + L + +++LL +P +D D+ V+ + + R
Sbjct: 374 KRAAVAL-KWKGIELRGVAFDL--LLAAYLL-NPA--QDAGDVAAVAKMKQYEAVRPDEA 427
Query: 1673 NLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELI 1732
K K+ L E A + R+ A AL L S E
Sbjct: 428 VYGKGAKRSLPDEPTLAEH----------------LVRKAAAIWALERPFLDELRSNEQD 471
Query: 1733 EALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTA 1792
L+ +E PL +LA+ME GI VD + Q + L ++LR +E++ Y LAG +F++ +
Sbjct: 472 GLLIKLEQPLATILAEMEFTGIKVDTKRLEQMGSELAEQLRAVEQRIYELAGQEFNINSP 531
Query: 1793 ADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTL 1852
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 532 KQLGIILFEKLQLPV---LKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYI 588
Query: 1853 GSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNA 1912
+ + + T K +H + Q T TGRLS EPNLQ + +E
Sbjct: 589 EGLLKV--VHPDTGK--VHTMFNQALTQTGRLSSAEPNLQNIPIRLE------------- 631
Query: 1913 EVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIA 1972
+ KI R F+PS+ +W++ AADYSQIELR++AH + D LI + D+ T A
Sbjct: 632 --EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHIADDDNLIEAFRR-DLDIHTKTA 686
Query: 1973 ARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGV 2032
SE+ V + R Q K + +GI+YG+ L++ LN + EA E I+ + +SFPGV
Sbjct: 687 MDIFHVSEEEVTATMRRQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGV 746
Query: 2033 ASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKI 2092
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK
Sbjct: 747 KRYMETIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERTAMNTPIQGSAADIIKK 806
Query: 2093 AMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKC 2152
AMI+ LAA + + + RLLLQVHDEL+LE ++ LV +
Sbjct: 807 AMID---------------LAARLKEERLQARLLLQVHDELILEAPKEEMERLCQLVPEV 851
Query: 2153 MESAALLLVPLLVKIQVGSTW 2173
ME A L VPL V G TW
Sbjct: 852 MEQAVALRVPLKVDYHYGPTW 872
>gi|229845908|ref|ZP_04466020.1| DNA polymerase I [Haemophilus influenzae 7P49H1]
gi|386266417|ref|YP_005829909.1| DNA polymerase I [Haemophilus influenzae R2846]
gi|229810912|gb|EEP46629.1| DNA polymerase I [Haemophilus influenzae 7P49H1]
gi|309973653|gb|ADO96854.1| DNA polymerase I [Haemophilus influenzae R2846]
Length = 930
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 266/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 444 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLEQATE 499
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 500 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFIQS 559
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 560 NEIATRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 617
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 618 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 673
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI + E + ++AADYSQIELR
Sbjct: 674 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AHEGYSIVAADYSQIELR 715
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 716 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 774
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ + +GYVE+L GR+ +L I
Sbjct: 775 GLSRQLGISRPDAQKYMDLYFQRYPSVQQFMTDIRAKAKAQGYVETLFGRRLYLPDINSS 834
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI I +I + PD +
Sbjct: 835 NAMRRKGAERVAINAPMQGTAADIIKRAMIKIDEVI---RHDPD-------------IEM 878
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 879 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAELVVPLIVEVGVGQNW 926
>gi|440798218|gb|ELR19286.1| DNA polymerase I, putative [Acanthamoeba castellanii str. Neff]
Length = 1123
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 178/581 (30%), Positives = 279/581 (48%), Gaps = 81/581 (13%)
Query: 1644 LSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRA 1703
L V K+ +D I W+L P + R+ + +++ L A + +
Sbjct: 298 LQEVDCKNFVDTRIGGWVLRPANNRADPFTYDALLQQYLDVFDNAGDAQEPK-------- 349
Query: 1704 AHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQ 1763
+ R ++ L + L+ + +++ E L +LA ME GI VD++
Sbjct: 350 --SVFSRDLSLLLPLAEKILGLITEQGMLDVFEGQESHLPPILAAMENAGISVDLDKLTA 407
Query: 1764 ARNLLQKKLRYLEKKAYTL-------------AGMKFSLYTAADIANVLYGHLKLPIP-- 1808
R LQ+++ LE+ + + AG KF L + +A+VLY LKL P
Sbjct: 408 YRAELQQRIALLEQSTFVVVGLSVPRDRAEEWAGKKFLLSSPKQVADVLYNQLKLAPPST 467
Query: 1809 EGHNKG-----KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLA--RI 1861
G KG K+HP+T + L L+ +H + +I EHR L KLL + A R
Sbjct: 468 PGQGKGVSQSPKKHPTTSEEALLALQEKHALPGIILEHRHLNKLLRSYIDPFVVHANKRN 527
Query: 1862 SMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE--HMVEFKMSNEDIYGGNAEVDHCKI 1919
++ + G W Q TATGRL+ +PNLQ + +EF + + +
Sbjct: 528 ETASGIPRVCGRWEQV-TATGRLASHDPNLQNLPRPESLEFFLDGVECI--------IPL 578
Query: 1920 NARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRS 1979
N RD F+ +Q + ++ADYSQ+E+RL+AH S++ AL+ S H D F ++ +R G+
Sbjct: 579 NLRDSFV-AQPGMVFVSADYSQLEMRLLAHISQEAALLQFFSDGH-DFFKLVGSRLWGKP 636
Query: 1980 EDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVA 2039
V +ER+ KR+ YG++YG G +L+ L S +A+ ++ F + FP V W+
Sbjct: 637 SAQVNEKERELAKRVCYGVMYGAGAASLATDLKVSPAKARVFVERFLAQFPAVNRWISDT 696
Query: 2040 VSSCHQ---------------------KGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAV 2078
H+ +GYV +L GR+R L I + + + A+RQAV
Sbjct: 697 KRQAHKDCPLPLDVFCARADMSPRHASEGYVRTLFGRRRLLPDIHSTSKEICAAAERQAV 756
Query: 2079 NSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVD 2138
N+I QG+A+D++K AM+ + D L A K + RL+LQVHDEL+ E
Sbjct: 757 NTIIQGTASDLVKQAMLAV-----------DVHLRAQ----KMKSRLVLQVHDELIYETP 801
Query: 2139 PSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
I+ LVQ+CME AA L +PL V +QVG GSL P+
Sbjct: 802 VDEIEAMAVLVQRCMEEAAKLDLPLPVSVQVGERIGSLHPY 842
>gi|419846091|ref|ZP_14369348.1| DNA-directed DNA polymerase [Haemophilus parainfluenzae HK2019]
gi|386414386|gb|EIJ28942.1| DNA-directed DNA polymerase [Haemophilus parainfluenzae HK2019]
Length = 932
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 172/555 (30%), Positives = 274/555 (49%), Gaps = 59/555 (10%)
Query: 1633 GLENVGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSE 1685
++ VG +F + ++GID+ + S++L + N++ K+ L +
Sbjct: 419 AIQKVGQNFKYDLTIFARNGIDVQGVAFDTMLESYVL----NSTGRHNMDDLAKRYLGHQ 474
Query: 1686 AAAAANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLN-I 1738
+ +G+ KNQ+ A T L VLW+ L E ++ L +
Sbjct: 475 TISFEEIAGKGKNQLTFNQIPLEKAAEYAAEDADVTMKLQQVLWEKLSKEPTLKKLFKEM 534
Query: 1739 EIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANV 1798
E+PL+ VL+ ME G+ +D + N + +L LE++AY LAG F+L + + +
Sbjct: 535 ELPLLGVLSRMERRGVLIDSDALFLQSNEIANRLSELEEQAYVLAGQPFNLASTKQLQEI 594
Query: 1799 LYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSL 1858
L+ L LP+ + KG PST++ L+ L H + V+ EHR L+KL + + +
Sbjct: 595 LFDKLGLPVIQKTPKGA--PSTNEEVLEELAFSHELPKVLVEHRGLSKLKSTYTDKLPQM 652
Query: 1859 ARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCK 1918
++ Q +H + Q TATGRLS +PNLQ + + NE+
Sbjct: 653 ----VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNEE-----------G 691
Query: 1919 INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGR 1978
R FI ++E + ++AADYSQIELR+MAH S+D LI ++ D+ AA G
Sbjct: 692 RRIRQAFI-AREGFTVVAADYSQIELRIMAHLSQDQGLINAFTQGK-DIHRSTAAEIFGV 749
Query: 1979 SEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHV 2038
S D V S++R K + +G++YGM LS QL +A+ + + +PGV +++H
Sbjct: 750 SLDEVTSEQRRNAKAINFGLIYGMSAFGLSRQLGIGRADAQSYMDLYFKRYPGVQTFMHD 809
Query: 2039 AVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIH 2098
+GYVE+L GR+ +L I N + A+R A+N+ QG+AADIIK AMI +
Sbjct: 810 IREKAKAQGYVETLFGRRLYLPDINSSNGMRRKAAERVAINAPMQGTAADIIKRAMIQLD 869
Query: 2099 SIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAAL 2158
+ PD +++QVHDELV EV + L++ MESAA
Sbjct: 870 QKLQN---DPD-------------IEMIMQVHDELVFEVRSEKVAFYSELIKTQMESAAD 913
Query: 2159 LLVPLLVKIQVGSTW 2173
L+VPL+V + G+ W
Sbjct: 914 LVVPLIVDVGQGTNW 928
>gi|261866908|ref|YP_003254830.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D11S-1]
gi|444345405|ref|ZP_21153423.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype c
str. AAS4A]
gi|261412240|gb|ACX81611.1| DNA polymerase I (POL I) [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|443542932|gb|ELT53212.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype c
str. AAS4A]
Length = 933
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 276/551 (50%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 424 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 479
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPL 1742
+ +G+ KNQ+ A T L VLW KL L+E +IE+PL
Sbjct: 480 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWQKLQPQPGLVELYQSIELPL 539
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
+ VL+ ME +G+ +D + N + ++L LE +A+TLAG F+L + + +L+
Sbjct: 540 LGVLSRMERYGVLIDSDALFLQSNEITERLTALEMQAHTLAGQPFNLASTKQLQEILFDK 599
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 600 LGLPVLQKTPKGV--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 653
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 654 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 696
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 697 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 754
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 755 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 814
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + A+R A+N+ QG+AAD IK AMI +
Sbjct: 815 AKAQGYVETLFGRRLYLPEINSSNAMRRKGAERVAINAPMQGTAADTIKRAMIKLD---- 870
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 871 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVP 918
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 919 LIVDVGVGENW 929
>gi|423670151|ref|ZP_17645180.1| DNA polymerase I [Bacillus cereus VDM034]
gi|423673642|ref|ZP_17648581.1| DNA polymerase I [Bacillus cereus VDM062]
gi|401297511|gb|EJS03120.1| DNA polymerase I [Bacillus cereus VDM034]
gi|401310507|gb|EJS15823.1| DNA polymerase I [Bacillus cereus VDM062]
Length = 877
Score = 242 bits (618), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 232/466 (49%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+V + + L E E +E+PL VLADME+ G+ VD +
Sbjct: 448 VARKVHVLYDVKQTFLEELKKNEQYELFTELELPLARVLADMEVKGVKVDTDRLRNMGEE 507
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L +L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD
Sbjct: 508 LAGRLKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDK 564
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H I+P I +R L KL + + + + S +H + Q T TGRLS
Sbjct: 565 LMDRHEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSST 620
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R F+PS+E WI+ AADYSQIELR++
Sbjct: 621 DPNLQNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVL 663
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH +KDP L+ D+ T A G +D V S R Q K + +GI+YG+ L
Sbjct: 664 AHIAKDPGLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGL 722
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S+ L + A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N
Sbjct: 723 SQNLGITRKAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNF 782
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI +A + + RLLL
Sbjct: 783 NLRSFAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLL 827
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+ E I++ LV + ME A L VPL V G TW
Sbjct: 828 QVHDELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|220931331|ref|YP_002508239.1| DNA polymerase I [Halothermothrix orenii H 168]
gi|219992641|gb|ACL69244.1| DNA polymerase I [Halothermothrix orenii H 168]
Length = 870
Score = 242 bits (618), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 232/444 (52%), Gaps = 40/444 (9%)
Query: 1730 ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSL 1789
ELIE +IEIPL+ VLA++E GI VD E +++L LE K + LAG KF++
Sbjct: 458 ELIELFNDIEIPLITVLAELEYNGIKVDAEYLESLSRKWEEELNGLESKIHELAGEKFNI 517
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
+ + +L+ L LP+ + K K ST L+ L +HPI+P+I E+R L KL +
Sbjct: 518 NSPKQLGGILFEKLGLPVIK---KTKTGYSTGAKVLEKLEDKHPIIPLISEYRQLMKLKS 574
Query: 1850 CTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG 1909
+ ++ + I+ T + LH + Q TATGRLS EPNLQ +
Sbjct: 575 TYVDALPPM--INPDTGR--LHTSFNQMVTATGRLSSTEPNLQNIP-------------- 616
Query: 1910 GNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFT 1969
D + R FI E+W+LLAADYSQIELR++AH S D L + D+ T
Sbjct: 617 --VRTDEGR-EIRRAFITENEDWVLLAADYSQIELRVLAHISDDEGLKAAFNTGQ-DIHT 672
Query: 1970 MIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSF 2029
A+ D V R K + +GI YGM P L+ L S EA + I + F
Sbjct: 673 QTASEVFEVEPDEVTPNMRRHAKVINFGIAYGMSPYGLARDLGISRQEASDYINKYFERF 732
Query: 2030 PGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADI 2089
GV ++ V+ KGYV ++ R+R++ +I N +S A+R A+N+ QG+AADI
Sbjct: 733 TGVKDYMERVVTEAKTKGYVTTIFNRRRYIPEINSRNYHRRSFAERTAINTPIQGTAADI 792
Query: 2090 IKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLV 2149
+K+AMI +++ + K + S A R+LLQVHDEL+LEV + E +V
Sbjct: 793 MKLAMIKVYNRL-----KENGSPA----------RILLQVHDELILEVPREDLTEMARIV 837
Query: 2150 QKCMESAALLLVPLLVKIQVGSTW 2173
+ ME A + VPL+V ++ G W
Sbjct: 838 KSEMEKAVDMKVPLVVNLESGPNW 861
>gi|416108060|ref|ZP_11590898.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348004684|gb|EGY45182.1| LOW QUALITY PROTEIN: DNA polymerase I [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
Length = 502
Score = 242 bits (618), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 166/528 (31%), Positives = 267/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + + N++ K+ L + + + +G+ KNQ+ A
Sbjct: 16 FDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISFEDIAGKGKNQLTFNQIPLEQAGE 71
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L VLW KL L+E +IE+PL+ VL+ ME +G+ +D +
Sbjct: 72 YAAEDADVTMKLQQVLWQKLQPQPGLVELYQSIELPLLGVLSRMERYGVLIDSDALFLQS 131
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + ++L LE +A+TLAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 132 NEITERLTALEMQAHTLAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGV--PSTNEEVL 189
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + V+ EHR L+KL + + + ++ Q +H + Q TATGRLS
Sbjct: 190 EELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM----VNPQTGRVHTSYHQAVTATGRLS 245
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE R FI +++ + ++AADYSQIELR
Sbjct: 246 SSDPNLQNI------PIRNE-----------AGRRIRQAFI-ARDGYKIIAADYSQIELR 287
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI ++ D+ AA G + V S++R K + +G++YGM
Sbjct: 288 IMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQVTSEQRRNAKAINFGLIYGMSSF 346
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A+ + + +P V +++H +GYVE+L GR+ +L +I
Sbjct: 347 GLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREKAKAQGYVETLFGRRLYLPEINSS 406
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AAD IK AMI + G+ + D + +
Sbjct: 407 NAMRRKGAERVAINAPMQGTAADTIKRAMIKL-----DGITRDDPDI-----------HM 450
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV I L+++ ME+AA L+VPL+V + VG W
Sbjct: 451 IMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVPLIVDVGVGENW 498
>gi|419840236|ref|ZP_14363632.1| DNA-directed DNA polymerase [Haemophilus haemolyticus HK386]
gi|386908057|gb|EIJ72756.1| DNA-directed DNA polymerase [Haemophilus haemolyticus HK386]
Length = 935
Score = 242 bits (618), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 267/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 449 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESIAGKGKSQLTFNQIPLEQATE 504
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 505 YAAEDADVTMKLQQALWLKLQEEPMLVELYKTMELPLLHVLSRMERTGVLIDSDALFIQS 564
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LE++AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 565 NEIAARLTALEEQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 622
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 623 EELAYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 678
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 679 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 720
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 721 IMAHLSSDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 779
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL +A++ + + +PGV ++ +GYVE+L GR+ +L I
Sbjct: 780 GLSRQLGIPRPDAQKYMDLYFQRYPGVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSS 839
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI I +I + PD +
Sbjct: 840 NAMRRKGAERVAINAPMQGTAADIIKRAMIKIDEVI---RHDPD-------------IEM 883
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV ++ +++ ME+AA L+VPL+V++ VG W
Sbjct: 884 IMQVHDELVFEVRSEKVEFFREQIKQHMEAAAELVVPLIVEVGVGQNW 931
>gi|415770541|ref|ZP_11484884.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D17P-2]
gi|348656714|gb|EGY74321.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D17P-2]
Length = 933
Score = 242 bits (618), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 276/551 (50%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 424 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 479
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPL 1742
+ +G+ KNQ+ A T L VLW KL L+E +IE+PL
Sbjct: 480 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWQKLQPQPGLVELYQSIELPL 539
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
+ VL+ ME +G+ +D + N + ++L LE +A+TLAG F+L + + +L+
Sbjct: 540 LGVLSRMERYGVLIDSDALFLQSNEITERLTALEMQAHTLAGQPFNLASTKQLQEILFDK 599
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 600 LGLPVLQKTPKGV--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 653
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 654 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 696
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 697 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 754
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 755 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 814
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + A+R A+N+ QG+AAD IK AMI +
Sbjct: 815 AKAQGYVETLFGRRLYLPEINSSNAMRRKGAERVAINAPMQGTAADTIKRAMIKLD---- 870
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 871 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVP 918
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 919 LIVDVGVGENW 929
>gi|429732469|ref|ZP_19267079.1| DNA-directed DNA polymerase [Aggregatibacter actinomycetemcomitans
Y4]
gi|429155977|gb|EKX98619.1| DNA-directed DNA polymerase [Aggregatibacter actinomycetemcomitans
Y4]
Length = 933
Score = 242 bits (617), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 277/551 (50%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 424 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 479
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPL 1742
+ +G+ KNQ+ A T L VLW+ L + + AL +IE+PL
Sbjct: 480 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWEKLEPQPGLVALYQSIELPL 539
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
++VL+ ME G+ +D + N + ++L LE +AY LAG F+L + + +L+G
Sbjct: 540 LSVLSRMERCGVLIDSDALFLQSNEITERLTALEMQAYALAGQPFNLASTKQLQEILFGK 599
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 600 LGLPVLQKTPKGA--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 653
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 654 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 696
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 697 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 754
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 755 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 814
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + +R A+N+ QG+AADIIK AMI +
Sbjct: 815 AKAQGYVETLFGRRLYLPEINSSNAMRRKGTERVAINAPMQGTAADIIKRAMIKLD---- 870
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 871 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVP 918
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 919 LIVDVGVGENW 929
>gi|423368613|ref|ZP_17346045.1| DNA polymerase I [Bacillus cereus VD142]
gi|401080139|gb|EJP88429.1| DNA polymerase I [Bacillus cereus VD142]
Length = 877
Score = 242 bits (617), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 264/579 (45%), Gaps = 73/579 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 366 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEK--EVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQ 1714
I +++L P D + K E S E Q A H R+V
Sbjct: 397 IAAYLLDPADTDKDFRAVAKMKETHAVKSDEEVYGKGAKRAVPEQEVVAEH--VARKVHV 454
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
+ + L E E +E+PL VLADME+ G+ VD E L +L+
Sbjct: 455 LYDVKQTFEEELEKNEQYELFTELELPLARVLADMEVKGVTVDTERLRNMGEELAGRLKE 514
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
+E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I
Sbjct: 515 MEQEIYELAGTEFNINSPKQLGVILFENLNLPVLK---KTKTGYSTSADVLDKLMDHHAI 571
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
+P I +R L KL + + + + S +H + Q T TGRLS EPNLQ +
Sbjct: 572 IPKILHYRQLGKLNSTYIEGLLKVVHDDSSK----IHTRFNQVLTQTGRLSSTEPNLQNI 627
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
+E + KI R FIPS+E WI+ AADYSQIELR++AH +KD
Sbjct: 628 PIRLE---------------EGRKI--RQAFIPSEEGWIMYAADYSQIELRVLAHIAKDE 670
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 671 GLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGIT 729
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+
Sbjct: 730 RKAAGEFIERYLESFPGVQEYMADIVKDAKQKGYVSTLLNRRRYIPEITSRNFNLRSFAE 789
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
R A+N+ QGSAADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 790 RTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELI 834
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E +++ LV + ME A L VPL V G TW
Sbjct: 835 FEAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|423484150|ref|ZP_17460840.1| DNA polymerase I [Bacillus cereus BAG6X1-2]
gi|401139176|gb|EJQ46739.1| DNA polymerase I [Bacillus cereus BAG6X1-2]
Length = 877
Score = 242 bits (617), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 248/523 (47%), Gaps = 44/523 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEK--EVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D+ I +++L P D + K E S E Q A H R
Sbjct: 393 FDLLIAAYLLDPADTDKDFRAVAKMKETHAVKSDEEVYGKGAKRAVPEQEVVAEH--VAR 450
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+V + + L E E +E+PL VLADME+ G+ VD E L
Sbjct: 451 KVHVLYDVKQTFEEELEKNEQYELFTELELPLARVLADMEVKGVTVDTERLRNMGEELAG 510
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 511 RLKEMEQEIYELAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMD 567
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
H I+P I +R L KL + + + + S +H + Q T TGRLS EPN
Sbjct: 568 HHAIIPKILHYRQLGKLNSTYIEGLLKVVHDDSSK----IHTRFNQVLTQTGRLSSTEPN 623
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + +E + KI R FIPS+E WI+ AADYSQIELR++AH
Sbjct: 624 LQNIPIRLE---------------EGRKI--RQAFIPSEEGWIMYAADYSQIELRVLAHI 666
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
+KD L+ D+ T A G +D V S R Q K + +GI+YG+ LS+
Sbjct: 667 AKDKGLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQN 725
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L + A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +
Sbjct: 726 LGITRKAAGEFIERYLESFPGVQEYMADIVKDAKQKGYVSTLLNRRRYIPEITSRNFNLR 785
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
S A+R A+N+ QGSAADIIK AMI +A + + RLLLQVH
Sbjct: 786 SFAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVH 830
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+ E +++ LV + ME A L VPL V G TW
Sbjct: 831 DELIFEAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|148826499|ref|YP_001291252.1| DNA polymerase I [Haemophilus influenzae PittEE]
gi|148716659|gb|ABQ98869.1| DNA polymerase I [Haemophilus influenzae PittEE]
Length = 930
Score = 242 bits (617), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 266/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 444 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLEQATE 499
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 500 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFIQS 559
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 560 NEIATRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 617
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 618 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 673
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI + E + ++AADYSQIELR
Sbjct: 674 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AHEGYSIVAADYSQIELR 715
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 716 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 774
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ + +GYVE+L GR+ +L I
Sbjct: 775 GLSRQLGISRLDAQKYMDLYFQRYPSVQQFMTDIRAKAKAQGYVETLFGRRLYLPDINSS 834
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI I +I + PD +
Sbjct: 835 NAMRRKGAERVAINAPMQGTAADIIKRAMIKIDEVI---RHDPD-------------IEM 878
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 879 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAELVVPLIVEVGVGQNW 926
>gi|416045430|ref|ZP_11575392.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype d
str. I63B]
gi|347995330|gb|EGY36518.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype d
str. I63B]
Length = 962
Score = 242 bits (617), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 277/551 (50%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 453 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 508
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPL 1742
+ +G+ KNQ+ A T L VLW+ L + + AL +IE+PL
Sbjct: 509 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWEKLEPQPGLVALYQSIELPL 568
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
++VL+ ME G+ +D + N + ++L LE +AY LAG F+L + + +L+G
Sbjct: 569 LSVLSRMERCGVLIDSDALFLQSNEITERLTALEMQAYALAGQPFNLASTKQLQEILFGK 628
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 629 LGLPVLQKTPKGA--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 682
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 683 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 725
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 726 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 783
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 784 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 843
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + +R A+N+ QG+AADIIK AMI +
Sbjct: 844 AKAQGYVETLFGRRLYLPEINSSNAMRRKGTERVAINAPMQGTAADIIKRAMIKLD---- 899
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 900 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKITFFSDLIKQHMEAAAELVVP 947
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 948 LIVDVGVGENW 958
>gi|335357478|ref|ZP_08549348.1| DNA polymerase I [Lactobacillus animalis KCTC 3501]
Length = 890
Score = 241 bits (616), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 187/561 (33%), Positives = 279/561 (49%), Gaps = 55/561 (9%)
Query: 1616 AVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKD-GIDMCIVSWILWPDDERSSNPNL 1674
A+ + F G T + LE +G + LK+ D+ +VS++L D + NL
Sbjct: 378 ALEVDVFDGKQ---TYVALERLG--------IELKNINFDLLLVSYLLNTSDNSNDLGNL 426
Query: 1675 EKEVKKRLSSEAAAAANRSGRWKNQMRRAAH-NGCCRRVAQTRALCSVLWKLLVSEELIE 1733
K + + K A + ++ L L K L E +
Sbjct: 427 AKRHDYFDVETDEEVYGKGAKRKVPADDALYFEHLAHKLKAISDLEDKLMKELAENEQED 486
Query: 1734 ALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAA 1793
IE PL VLA ME+ GI VD E ++ +++L LE++ Y AG KF++ +
Sbjct: 487 LYFEIERPLSLVLAQMEISGIKVDRERLDIMQSEFKERLSELEQQIYNEAGEKFNINSPK 546
Query: 1794 DIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLG 1853
+ +L+ LKLP+ + K K ST L+ LR PI+ I +R LAKL +
Sbjct: 547 QLGVILFEKLKLPVVK---KTKTGYSTAVDVLEKLRGMSPIIDNILAYRQLAKLQSTY-- 601
Query: 1854 SICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAE 1913
+ L ++ + K +H + QT TATGRLS +PNLQ + +E
Sbjct: 602 -VEGLLKVIAADGK--VHTRYTQTLTATGRLSSVDPNLQNIPVRLE-------------- 644
Query: 1914 VDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAA 1973
+ KI R F+PS +W + A+DYSQIELR++AH SKDP + K D+ A
Sbjct: 645 -EGRKI--RQAFVPSHPDWEIFASDYSQIELRVLAHISKDPHMQQAF-KDDFDIHANTAM 700
Query: 1974 RWTGRSEDS-VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGV 2032
R G + S V + R Q K + +GI+YG+ L++ + + +AKE ++++ +SFPGV
Sbjct: 701 RIFGLDDPSEVTANMRRQAKAVNFGIVYGISDFGLAQSIGSTRKQAKEFMETYLASFPGV 760
Query: 2033 ASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKI 2092
++ + S QKGYVE+L R+R+L IK N +S A+R A+N+ QGSAADIIK+
Sbjct: 761 HQYMQDIIESARQKGYVETLFHRRRYLPDIKSKNYNLRSFAERTAMNTPIQGSAADIIKV 820
Query: 2093 AMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKC 2152
AMIN+ + D+ L A ++LLQVHDEL+ E + I + LV K
Sbjct: 821 AMINMQQAL------KDAGLEA---------KMLLQVHDELIFEAPKAEIPKLKELVPKI 865
Query: 2153 MESAALLLVPLLVKIQVGSTW 2173
M+SA L VPL V+ G TW
Sbjct: 866 MDSAVELSVPLKVESASGKTW 886
>gi|417841860|ref|ZP_12487958.1| DNA polymerase I [Haemophilus haemolyticus M19501]
gi|341948234|gb|EGT74865.1| DNA polymerase I [Haemophilus haemolyticus M19501]
Length = 935
Score = 241 bits (616), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 267/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S++L + N++ K+ L E A + +G+ K Q+ A
Sbjct: 449 FDTMLLSYML----NSTGRHNMDDLAKRYLGHETIAFESIAGKGKGQLTFNQIPLEQATE 504
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 505 YAAEDADVTMKLQQALWLKLQEEPTLVELYETMELPLLHVLSRMERTGVLIDSDALFMQS 564
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LE++AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 565 NEIATRLTALEEQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 622
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 623 EELAYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 678
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 679 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 720
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 721 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 779
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +PGV ++ +GYVE+L GR+ +L I
Sbjct: 780 GLSRQLGISRPDAQKYMDLYFQRYPGVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSS 839
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + +I + P+ +
Sbjct: 840 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEVI---RHDPN-------------IEM 883
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 884 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAKLVVPLIVEVGVGQNW 931
>gi|170717348|ref|YP_001784457.1| DNA polymerase I [Haemophilus somnus 2336]
gi|168825477|gb|ACA30848.1| DNA polymerase I [Haemophilus somnus 2336]
Length = 951
Score = 241 bits (616), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 251/461 (54%), Gaps = 44/461 (9%)
Query: 1715 TRALCSVLWK-LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VLW+ L S L++ +IE+PLV VL+ ME G+ +D + L+ + ++L
Sbjct: 529 TMKLHQVLWQELQQSPSLVKVFNDIELPLVKVLSTMERNGVLIDSQALLKQSEKIARRLT 588
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE++ Y AG +F+L + + +L+ L LPI KG PST++ L+ L +
Sbjct: 589 ALEQQVYQEAGAEFNLASTKQLQEILFTKLALPIIAKTPKGA--PSTNEDVLETLAQQGH 646
Query: 1834 IVP-VIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IVP ++ EHR LAKL + + S+ ++ + +H + Q TATGRLS +PNLQ
Sbjct: 647 IVPKLLMEHRGLAKLKSTYTDKLPSM----VNKKTGRVHTSYHQAVTATGRLSSSDPNLQ 702
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ + NE+ C R FI +++ + ++AADYSQIELR+MAH S+
Sbjct: 703 NI------PIKNEE--------GRC---IRQAFI-ARKGYKIIAADYSQIELRIMAHLSQ 744
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI ++ D+ AA G + V S++R K + +G++YGM LS QL
Sbjct: 745 DNGLIMAFNEGK-DIHRSTAAEIFGIPLNEVTSEQRRSAKAINFGLIYGMSSFGLSNQLG 803
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
S A++ + + +PGV +++ ++GYVE+L GR+ +L +I N +
Sbjct: 804 ISRANAQKYMDLYFQRYPGVQTFMVDIREKAKEQGYVETLFGRRLYLPEINSSNAIRRKG 863
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK+AMI IH+ ++ K ++++QVHDE
Sbjct: 864 AERVAINAPMQGTAADIIKLAMIAIHN-----------------EIKKNDIQMIMQVHDE 906
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV EV + + E +L++ ME+AA L VPL+V I VG W
Sbjct: 907 LVFEVKENKVDEYSALIKSLMENAAHLSVPLIVDIGVGDNW 947
>gi|416031112|ref|ZP_11572398.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype a
str. H5P1]
gi|348002278|gb|EGY42982.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype a
str. H5P1]
Length = 962
Score = 241 bits (616), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 277/551 (50%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 453 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 508
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPL 1742
+ +G+ KNQ+ A T L VLW+ L + + AL +IE+PL
Sbjct: 509 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWEKLEPQPGLVALYQSIELPL 568
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
++VL+ ME G+ +D + N + ++L LE +AY LAG F+L + + +L+G
Sbjct: 569 LSVLSRMERCGVLIDSDALFLQSNEITERLTALEMQAYALAGQPFNLASTKQLQEILFGK 628
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 629 LGLPVLQKTPKGA--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 682
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 683 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 725
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 726 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 783
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 784 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 843
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + +R A+N+ QG+AADIIK AMI +
Sbjct: 844 AKAQGYVETLFGRRLYLPEINSSNAMRRKGTERVAINAPMQGTAADIIKRAMIKLD---- 899
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 900 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVP 947
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 948 LIVDVGVGENW 958
>gi|415756317|ref|ZP_11481025.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D17P-3]
gi|348655828|gb|EGY71260.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D17P-3]
Length = 895
Score = 241 bits (616), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 277/551 (50%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 386 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 441
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPL 1742
+ +G+ KNQ+ A T L VLW+ L + + AL +IE+PL
Sbjct: 442 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWEKLEPQPGLVALYQSIELPL 501
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
++VL+ ME G+ +D + N + ++L LE +AY LAG F+L + + +L+G
Sbjct: 502 LSVLSRMERCGVLIDSDALFLQSNEITERLTALEMQAYALAGQPFNLASTKQLQEILFGK 561
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 562 LGLPVLQKTPKGA--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 615
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 616 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 658
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 659 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 716
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 717 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 776
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + +R A+N+ QG+AADIIK AMI +
Sbjct: 777 AKAQGYVETLFGRRLYLPEINSSNAMRRKGTERVAINAPMQGTAADIIKRAMIKLD---- 832
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 833 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVP 880
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 881 LIVDVGVGENW 891
>gi|373468008|ref|ZP_09559294.1| DNA-directed DNA polymerase [Haemophilus sp. oral taxon 851 str.
F0397]
gi|371757046|gb|EHO45845.1| DNA-directed DNA polymerase [Haemophilus sp. oral taxon 851 str.
F0397]
Length = 935
Score = 241 bits (616), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 267/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E + +G+ K+Q+ A
Sbjct: 449 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIEFESIAGKGKSQLTFNQIPLEQATE 504
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 505 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFMQS 564
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LE++AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 565 NEIATRLTALEEQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 622
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 623 EELAYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 678
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 679 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 720
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 721 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 779
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +PGV ++ +GYVE+L GR+ +L I
Sbjct: 780 GLSRQLGISRPDAQKYMDLYFQRYPGVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSS 839
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + +I + PD +
Sbjct: 840 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEVI---RHDPD-------------IEM 883
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV ++ +++ ME+AA L+VPL+V++ VG W
Sbjct: 884 IMQVHDELVFEVRSEKVEFFREQIKQHMEAAAKLVVPLIVEVGVGQNW 931
>gi|442804423|ref|YP_007372572.1| DNA polymerase I [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|38146981|gb|AAR11875.1| DNA polymerase I [Clostridium stercorarium]
gi|442740273|gb|AGC67962.1| DNA polymerase I [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 898
Score = 241 bits (616), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 241/453 (53%), Gaps = 41/453 (9%)
Query: 1722 LWKLLVSEELIEALLN-IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAY 1780
+ K ++ E E L N IE+PL+ VLA ME G VD + +L +++ LEK Y
Sbjct: 482 MQKKVLQENRQEELFNDIELPLITVLASMEYHGFKVDAAKLHEYGEVLLSRIKDLEKVIY 541
Query: 1781 TLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKE 1840
LAG +F++ + + +L+ LKLP+ + G STD L+ L ++H I+P I E
Sbjct: 542 MLAGEEFNINSTKQLGTILFEKLKLPVVKSTKTGY---STDVEVLEELYYKHDIIPCIIE 598
Query: 1841 HRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEF 1900
+R L KL + + I+ T K +H + QT TATGR+S EPNLQ + V
Sbjct: 599 YRQLTKLYTTYAEGLEKV--INPVTGK--IHSSFNQTVTATGRISSTEPNLQNIP--VRH 652
Query: 1901 KMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLL 1960
+M E R FIPS EN + + ADYSQIELR++AH + D ALI
Sbjct: 653 EMGRE---------------IRKAFIPSSENAVFVDADYSQIELRVLAHITGDEALINAF 697
Query: 1961 SKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKE 2020
K D+ T A+ + + V + R + K + +GI+YG+ L+ L + EAK
Sbjct: 698 VKGE-DIHTATASLVFDVAPEDVTPELRRKAKAVNFGIVYGISDYGLARDLGITRKEAKR 756
Query: 2021 KIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNS 2080
I + + +P V +++ V ++GYVE+L R+R+L ++ N ++S +R A+N+
Sbjct: 757 YIDDYFAKYPKVKTYVDEIVRVGQEQGYVETLFHRRRYLPELASKNFHQRSFGKRVAMNT 816
Query: 2081 ICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPS 2140
QG+AADIIKIAM+ ++ + +S L + RL+LQVHDELV+E
Sbjct: 817 PIQGTAADIIKIAMVKVYKAL------KESGL---------KSRLILQVHDELVIETFED 861
Query: 2141 VIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++ LV+KCME A L VPL+V + +G W
Sbjct: 862 ELETVKELVKKCMEEAVELSVPLVVDVSIGKNW 894
>gi|423521530|ref|ZP_17498003.1| DNA polymerase I [Bacillus cereus HuA4-10]
gi|401177732|gb|EJQ84919.1| DNA polymerase I [Bacillus cereus HuA4-10]
Length = 877
Score = 241 bits (616), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 264/579 (45%), Gaps = 73/579 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 366 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEK--EVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQ 1714
I +++L P D + K E S E Q A H R+V
Sbjct: 397 IAAYLLDPADTDKDFRAVAKMKETHAVKSDEEVYGKGAKRAVPEQEVVAEH--VARKVHV 454
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
+ + L E E +E+PL VLADME+ G+ VD E L +L+
Sbjct: 455 LFDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVTVDTERLRNMGEELAGRLKE 514
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
+E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I
Sbjct: 515 MEQEIYELAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHAI 571
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
+P I +R L KL + + + + S +H + Q T TGRLS EPNLQ +
Sbjct: 572 IPKILHYRQLGKLNSTYIEGLLKVVHDDSSK----IHTRFNQVLTQTGRLSSTEPNLQNI 627
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
+E + KI R FIPS+E WI+ AADYSQIELR++AH +KD
Sbjct: 628 PIRLE---------------EGRKI--RQAFIPSEEGWIMYAADYSQIELRVLAHIAKDE 670
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 671 GLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGIT 729
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+
Sbjct: 730 RKAAGEFIERYLESFPGVQEYMADIVKDAKQKGYVSTLLNRRRYIPEITSRNFNLRSFAE 789
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
R A+N+ QGSAADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 790 RTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELI 834
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E +++ LV + ME A L VPL V G TW
Sbjct: 835 FEAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|212638359|ref|YP_002314879.1| DNA polymerase I [Anoxybacillus flavithermus WK1]
gi|212559839|gb|ACJ32894.1| DNA polymerase I [Anoxybacillus flavithermus WK1]
Length = 875
Score = 241 bits (616), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 256/524 (48%), Gaps = 46/524 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D+ + +++L P D +N ++ K + ++ + G+ Q + V
Sbjct: 391 FDLLLAAYLLNPTD---ANGDVAAVAKTKQYTDVQSDEEVYGKGAKQAIPPTNVLAEHLV 447
Query: 1713 AQTRALCSV---LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
+ +A+ S+ + L E E L+++E+PL +LA ME +G+ VD++ Q
Sbjct: 448 RKAKAIASLKETYIQELKRNEQFELLVHLELPLTFILAQMEFYGVKVDVDRLEQMGKEFT 507
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
+L +E++ Y LAG F++ + + +L+ L+LPI + K K ST L+ L
Sbjct: 508 AQLEQIEQRIYELAGTTFNINSPKQLGTILFEKLQLPIVK---KTKTGYSTSADVLEKLA 564
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
H I+ I +R L KL + + + + R +H + Q T TGRLS EP
Sbjct: 565 PYHEIIEQILHYRQLGKLQSTYVEGLMKVVRKDTGK----VHTIFQQALTQTGRLSSTEP 620
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + +E + KI R F+PS ++W++ AADYSQIELR++AH
Sbjct: 621 NLQNIPIRIE---------------EGRKI--RQAFVPSSDDWVIFAADYSQIELRVLAH 663
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
+ D LI D+ T A ED V + R Q K + +GI+YG+ LS+
Sbjct: 664 IANDENLIAAFHHDL-DIHTKTAMDIFHVKEDEVTAHMRRQAKAVNFGIVYGISDYGLSQ 722
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
L + EA E I+ + S+PGV ++ V QKGYV +L R+R+L I GN
Sbjct: 723 NLGITRKEAAEFIERYFRSYPGVKRYMEEVVQDAKQKGYVTTLLHRRRYLPDITSGNFNV 782
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S A+R A+N+ QGSAADIIK AMI+ LA + + RLLLQV
Sbjct: 783 RSFAERTAMNTPIQGSAADIIKKAMID---------------LANRLHEERLQTRLLLQV 827
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDEL+LE I+ +V ME+A L VPL V G TW
Sbjct: 828 HDELILEAPKEEIELLKKIVPDVMENAVSLRVPLKVDYHFGPTW 871
>gi|444334877|ref|ZP_21150292.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype a
str. A160]
gi|443549787|gb|ELT58415.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype a
str. A160]
Length = 933
Score = 241 bits (616), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 278/551 (50%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 424 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 479
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPL 1742
+ +G+ KNQ+ A T L VLW+ L + + AL +IE+PL
Sbjct: 480 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWEKLEPQPGLVALYQSIELPL 539
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
++VL+ ME G+ +D + N + ++L LE +AY LAG F+L + + +L+G
Sbjct: 540 LSVLSRMERCGVLIDSDALFLQSNEITERLTALEMQAYALAGQPFNLASTKQLQEILFGK 599
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 600 LGLPVLQKTPKGA--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 653
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 654 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 696
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MA+ S D LI ++ D+ AA G +
Sbjct: 697 QAFI-ARDGYKIIAADYSQIELRIMAYLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 754
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 755 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 814
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + A+R A+N+ QG+AADIIK AMI +
Sbjct: 815 AKAQGYVETLFGRRLYLPEINSSNAMRRKGAERVAINAPMQGTAADIIKRAMIKLD---- 870
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 871 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVP 918
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 919 LIVDVGVGENW 929
>gi|428311386|ref|YP_007122363.1| DNA polymerase I [Microcoleus sp. PCC 7113]
gi|428252998|gb|AFZ18957.1| DNA polymerase I [Microcoleus sp. PCC 7113]
Length = 1095
Score = 241 bits (616), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 268/544 (49%), Gaps = 68/544 (12%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR---RAAHNGCC 1709
D + S+IL PD + NL +K L + + + + K +A + C
Sbjct: 593 FDTMLASYILNPD----TTHNLTDLSQKYLGIKPKSYSELVPKGKTIADVSIQAVADYCG 648
Query: 1710 RRVAQTRALCSVL-WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
T +L S L +L +L E LLN+E PL VLA+ME GI +D + L
Sbjct: 649 MDAYTTFSLVSKLRTELETVPKLHELLLNVEQPLEPVLAEMEYQGIRIDTAYLKELSQQL 708
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
++ L +E+ AY AG +F+L + ++ +L+ L L + K K STD L+ L
Sbjct: 709 EQDLDAIEQTAYQAAGGQFNLGSPKQLSELLFETLGLDRKKSR-KIKTGYSTDAATLEKL 767
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
+H +V I EHRTL+KL + + ++ +L R TQ+ +H + QT+T+TGRLS
Sbjct: 768 SGDHAVVDAILEHRTLSKLKSTYVDALPALVR--SDTQR--VHTDYNQTATSTGRLSSSN 823
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + F R FIP + +W+L AADYSQIELR++A
Sbjct: 824 PNLQNIPIRTAFSR-----------------KIRQAFIP-EADWLLAAADYSQIELRILA 865
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
HFS++P L+ DV T + AR E +V ER K + +G++YGMG +
Sbjct: 866 HFSQEPILVETYQN-QEDVHT-VTARLLFEKE-TVTPDERRLGKTINFGVIYGMGAQRFA 922
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF-------LSK 2061
+ S+ E K+ I+ F +P V +L +GYVE++ GR+R+ L
Sbjct: 923 REAGVSATEGKKFIERFNQRYPKVFEYLQKLQREAIAQGYVETILGRRRYFQFNSGTLRS 982
Query: 2062 IKFGNNKE------------KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPD 2109
+K N +E + R A N+ QGS+ADIIKIAM+N+H ++
Sbjct: 983 LKGKNPQEIELNKLGVRDQYDAGLLRAAANAPIQGSSADIIKIAMVNVHKLL-------- 1034
Query: 2110 SSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQV 2169
Q + + RLLLQVHDELV EV P V +E +++ MESA L VPL+V I
Sbjct: 1035 -------QDYQEKARLLLQVHDELVFEVRPDVWEELQPKIRETMESAVELSVPLMVDIHA 1087
Query: 2170 GSTW 2173
G W
Sbjct: 1088 GQNW 1091
>gi|378697057|ref|YP_005179015.1| fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5'
exonuclease [Haemophilus influenzae 10810]
gi|301169575|emb|CBW29176.1| fused DNA polymerase I 5'->3' exonuclease/3'->5' polymerase/3'->5'
exonuclease [Haemophilus influenzae 10810]
Length = 935
Score = 241 bits (616), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 266/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 449 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLEQATE 504
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 505 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFMQS 564
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 565 NEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 622
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 623 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 678
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 679 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 720
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 721 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 779
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ +GYVE+L GR+ +L I
Sbjct: 780 GLSRQLGISRPDAQKYMDLYFQRYPSVQQFMTDIREKAKTQGYVETLFGRRLYLPDINSS 839
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + +I + P+ +
Sbjct: 840 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEVI---HHDPN-------------IEM 883
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ MESAA L+VPL+V++ VG W
Sbjct: 884 IMQVHDELVFEVRSEKVAFFREQIKQHMESAAELVVPLIVEVGVGQNW 931
>gi|398813590|ref|ZP_10572284.1| DNA polymerase I [Brevibacillus sp. BC25]
gi|398038396|gb|EJL31560.1| DNA polymerase I [Brevibacillus sp. BC25]
Length = 882
Score = 241 bits (616), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 178/525 (33%), Positives = 263/525 (50%), Gaps = 48/525 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLE----KEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGC 1708
D+ + S++L + SNP L+ + + R+ S+ + R +M + +
Sbjct: 398 FDVYLASYLL---NAAESNPTLDSIAAQYAQTRVLSDEEVYGKGAKRLVPEMDVLSEH-V 453
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
+ A VL + L E+ + L +E PL VLA ME GI V+ E +Q L
Sbjct: 454 AHKAAAIWQSVPVLREQLAENEMEKLLGELEAPLSMVLALMEKQGIKVNSERLVQMGEDL 513
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
+KL L + Y LAG F++ + + +L+ L LP+ + K K PST L+ L
Sbjct: 514 DQKLAGLTDQIYELAGGAFNINSPKQLGEILFDRLSLPVLK---KTKTGPSTSADVLEKL 570
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
HPI+ I R L KL + + + + T+ +H + Q +TATGRLS +
Sbjct: 571 APYHPIIDAILIFRQLGKLRSTYIEGLTK----EIHTKTSKVHTLYNQATTATGRLSSTD 626
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + +E + KI R+ FIPS++ W +LAADYSQIELR++A
Sbjct: 627 PNLQNIPIRME---------------EGRKI--REAFIPSEDGWYMLAADYSQIELRILA 669
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H S+D LI K D+ T A G S++ V S R Q K + +GI+YG+ LS
Sbjct: 670 HISQDENLIDAFQKGM-DIHTRTAMDVFGVSKEEVTSLMRRQAKAVNFGIVYGISDYGLS 728
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
+ LN + EA + I+ + F GV W+ V GYV +L R+R+L I+ N
Sbjct: 729 QNLNITRKEAGDFIERYFDVFSGVKRWMDEIVQQAKADGYVTTLLNRRRYLPDIRSSNFN 788
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+S A+R A+N+ QG+AAD+IK+AMI + I + LA+ R+LLQ
Sbjct: 789 LRSFAERTAMNTPIQGTAADVIKLAMIRMQEAI------EEKGLAS---------RMLLQ 833
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VHDELV EV + ++ LV + MESA L VPL V + G TW
Sbjct: 834 VHDELVFEVPENELEVMRKLVPEVMESALSLNVPLKVDVSDGRTW 878
>gi|77361672|ref|YP_341247.1| multifunctional DNA polymerase I: 5'->3' exonuclease/3'->5'
polymerase/3'->5' exonuclease [Pseudoalteromonas
haloplanktis TAC125]
gi|76876583|emb|CAI87805.1| multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal);
3'->5' polymerase; 3'->5' exonuclease (C-terminal)
[Pseudoalteromonas haloplanktis TAC125]
Length = 911
Score = 241 bits (616), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 245/460 (53%), Gaps = 40/460 (8%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VLW KL E+L +IE+PLVNV++D+E G+ +D + L ++L
Sbjct: 487 TLRLHQVLWPKLAADEKLKSVFEDIEMPLVNVISDIERTGVAIDSKMLAAHSQRLGERLL 546
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LEK+AY +AG F+L + + +L+ L+LPI + KG PST + L L H++P
Sbjct: 547 ELEKEAYEIAGEPFNLSSPKQLQVLLFEKLELPIIKKTPKGA--PSTAEEVLQELAHDYP 604
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI EHR L+KL + + + ++ TQ+ +H + Q TATGRLS +PNLQ
Sbjct: 605 LPKVIIEHRGLSKLKSTYTDKLPLM--VNEKTQR--VHTSYHQAVTATGRLSSTDPNLQN 660
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E + +I R+ FI + + + ++AADYSQIELR+MAH S+D
Sbjct: 661 IPIRSE---------------EGRRI--REAFI-AADGYKIVAADYSQIELRIMAHLSQD 702
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
L+ + DV + AA G S + V S R + K + +G++YGM L+ QL+
Sbjct: 703 KGLLSAFANGL-DVHSATAAEVFGVSLEEVTSDMRRKAKAVNFGLIYGMSAFGLARQLDV 761
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
+EA+ I + FPGV ++ + GYVE++ GR+ +L +IK N + A
Sbjct: 762 PRHEAQHYIDKYFERFPGVLEYMETTREKAAESGYVETIFGRRLYLPEIKAQNGARRKGA 821
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+++HS + ++ +LL+QVHDEL
Sbjct: 822 ERAAINAPMQGTAADIIKKAMLSVHSWV--------------YEQAPNTVKLLMQVHDEL 867
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E+ + + + M AA L VPL+V+ G W
Sbjct: 868 VFEIKTDCVDAYTKHICELMSQAATLDVPLIVEADEGDNW 907
>gi|423389109|ref|ZP_17366335.1| DNA polymerase I [Bacillus cereus BAG1X1-3]
gi|423417504|ref|ZP_17394593.1| DNA polymerase I [Bacillus cereus BAG3X2-1]
gi|401107783|gb|EJQ15728.1| DNA polymerase I [Bacillus cereus BAG3X2-1]
gi|401642384|gb|EJS60095.1| DNA polymerase I [Bacillus cereus BAG1X1-3]
Length = 877
Score = 241 bits (615), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 231/466 (49%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+V + + L E E +E+PL VLADME+ G+ VD E
Sbjct: 448 VARKVHVLYDVKQTFIEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEE 507
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L +L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD
Sbjct: 508 LAGRLKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDK 564
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H I+P I +R L KL + + + + S +H + Q T TGRLS
Sbjct: 565 LMDHHEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSST 620
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R F+PS+E WI+ AADYSQIELR++
Sbjct: 621 DPNLQNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVL 663
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH + DP L+ D+ T A G +D V S R Q K + +GI+YG+ L
Sbjct: 664 AHIANDPGLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGL 722
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S+ L + A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N
Sbjct: 723 SQNLGITRKAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNF 782
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI +A + + RLLL
Sbjct: 783 NLRSFAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLL 827
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+ E I++ LV + ME A L VPL V G TW
Sbjct: 828 QVHDELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|163942320|ref|YP_001647204.1| DNA polymerase I [Bacillus weihenstephanensis KBAB4]
gi|163864517|gb|ABY45576.1| DNA polymerase I [Bacillus weihenstephanensis KBAB4]
Length = 877
Score = 241 bits (615), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 230/466 (49%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+V + + L E E +E+PL VLADME+ G+ VD E
Sbjct: 448 VARKVHVLYDVKQTFLEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEE 507
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L +L+ +E++ Y LAG +F++ + + +L+ L LP+ + K K ST LD
Sbjct: 508 LAGRLKEMEQEIYKLAGTEFNINSPKQLGVILFEDLNLPVIK---KTKTGYSTSADVLDK 564
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H I+P I +R L KL + + + + S +H + Q T TGRLS
Sbjct: 565 LMDRHEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSST 620
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R F+PS+E WI+ AADYSQIELR++
Sbjct: 621 DPNLQNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVL 663
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH + DP L+ D+ T A G +D V S R Q K + +GI+YG+ L
Sbjct: 664 AHIANDPGLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGL 722
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S+ L + A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N
Sbjct: 723 SQNLGITRKAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNF 782
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI +A + + RLLL
Sbjct: 783 NLRSFAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLL 827
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+ E I++ LV + ME A L VPL V G TW
Sbjct: 828 QVHDELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|423470787|ref|ZP_17447531.1| DNA polymerase I [Bacillus cereus BAG6O-2]
gi|402434525|gb|EJV66563.1| DNA polymerase I [Bacillus cereus BAG6O-2]
Length = 877
Score = 241 bits (615), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 248/523 (47%), Gaps = 44/523 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEK--EVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D+ I +++L P D + K E S E Q A H R
Sbjct: 393 FDLLIAAYLLDPADTDKDFRAVAKMKETHAVKSDEEVYGKGAKRAVPEQEVVAEH--VAR 450
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+V + + L E E +E+PL VLADME+ G+ VD E L
Sbjct: 451 KVHVLFDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVTVDTERLRNMGEELAG 510
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 511 RLKEMEQEIYELAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMD 567
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
H I+P I +R L KL + + + + S +H + Q T TGRLS EPN
Sbjct: 568 HHAIIPKILHYRQLGKLNSTYIEGLLKVVHDDSSK----IHTRFNQVLTQTGRLSSTEPN 623
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + +E + KI R FIPS+E WI+ AADYSQIELR++AH
Sbjct: 624 LQNIPIRLE---------------EGRKI--RQAFIPSEEGWIMYAADYSQIELRVLAHI 666
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
+KD L+ D+ T A G +D V S R Q K + +GI+YG+ LS+
Sbjct: 667 AKDEGLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQN 725
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L + A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +
Sbjct: 726 LGITRKAAGEFIERYLESFPGVQEYMADIVKDAKQKGYVSTLLNRRRYIPEITSRNFNLR 785
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
S A+R A+N+ QGSAADIIK AMI +A + + RLLLQVH
Sbjct: 786 SFAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVH 830
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+ E +++ LV + ME A L VPL V G TW
Sbjct: 831 DELIFEAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|423452131|ref|ZP_17428984.1| DNA polymerase I [Bacillus cereus BAG5X1-1]
gi|401142202|gb|EJQ49751.1| DNA polymerase I [Bacillus cereus BAG5X1-1]
Length = 877
Score = 241 bits (615), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 248/523 (47%), Gaps = 44/523 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEK--EVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D+ I +++L P D + K E S E Q A H R
Sbjct: 393 FDLLIAAYLLDPADTDKDFRAVAKMKETHAVKSDEEVYGKGAKRAVPEQEVVAEH--VAR 450
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+V + + L E E +E+PL VLADME+ G+ VD E L
Sbjct: 451 KVHVLFDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVTVDTERLRNMGEELAG 510
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 511 RLKEMEQEIYELAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMD 567
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
H I+P I +R L KL + + + + S +H + Q T TGRLS EPN
Sbjct: 568 HHAIIPKILHYRQLGKLNSTYIEGLLKVVHDDSSK----IHTRFNQVLTQTGRLSSTEPN 623
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + +E + KI R FIPS+E WI+ AADYSQIELR++AH
Sbjct: 624 LQNIPIRLE---------------EGRKI--RQAFIPSEEGWIMYAADYSQIELRVLAHI 666
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
+KD L+ D+ T A G +D V S R Q K + +GI+YG+ LS+
Sbjct: 667 AKDEGLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQN 725
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L + A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +
Sbjct: 726 LGITRKAAGEFIERYLESFPGVQEYMADIVKDAKQKGYVSTLLNRRRYIPEITSRNFNLR 785
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
S A+R A+N+ QGSAADIIK AMI +A + + RLLLQVH
Sbjct: 786 SFAERTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVH 830
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+ E +++ LV + ME A L VPL V G TW
Sbjct: 831 DELIFEAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|291412349|ref|XP_002722448.1| PREDICTED: DNA-directed DNA polymerase nu [Oryctolagus cuniculus]
Length = 858
Score = 241 bits (615), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 279/547 (51%), Gaps = 42/547 (7%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH 1705
H+ D G+D I +W++ D R + + E V K L E + S + N R +
Sbjct: 329 HVADFVGLDPRIAAWLI---DPRDATLSFEHLVAKYL--EKSTTVKVSSTYGNASRNIVN 383
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
+ L L L + L + +E+PL+ +LA ME + V+ E +
Sbjct: 384 QNVHMNLRILHRLMMTLCSKLKAYSLWQLFWTLELPLIPILAVMERHSVQVNKEEMERTS 443
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGK----QHPSTD 1821
LL +L+ LE++A+ +AG +F + + + +L+ LKL + K ++PST
Sbjct: 444 ALLGARLKELEQEAHFVAGERFLITSNNQLREILFDKLKLHLLSQRRLPKTGLQKYPSTS 503
Query: 1822 KHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTAT 1881
+ L+ L+ HP+ +I E+R + K+ + + + + R + ++ W QT T T
Sbjct: 504 EAVLNALQDLHPLPKIILEYRQVHKIKSTFVDGLLACMR------EGSISSTWNQTGTVT 557
Query: 1882 GRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQ 1941
GRLS + PN+Q + ++ G E+ I+ R F+ S + LAAD+SQ
Sbjct: 558 GRLSAKHPNIQGISRHPIHITKPQNTKGKEDEI--LTISPRAMFVSSAGH-TFLAADFSQ 614
Query: 1942 IELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILY 2000
IELR++AH S D L+ L + DVF+ + ++W + V +R+QTK+++Y ++Y
Sbjct: 615 IELRILAHLSGDAELLKLFHESEREDVFSTLTSQWKNMPVEHVTHVDREQTKKVVYSVVY 674
Query: 2001 GMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLS 2060
G G L+ L + EA +++F + ++ + A++ CHQ+GYV S+ GR+R L
Sbjct: 675 GAGKERLAACLGVAVPEAARFLETFLQKYKKISDFAQAAIAQCHQRGYVTSVTGRRRPLP 734
Query: 2061 KIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLK 2120
+I +++A+RQAVN + QGSAAD+ K+AMI I + + +L A
Sbjct: 735 RICAQEPHLRAQAERQAVNFVVQGSAADLCKMAMIRIFAAVSSS-----PTLTA------ 783
Query: 2121 GRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLVKIQVGSTW 2173
RL+ Q+HDEL+ EV+ + I E +LV+ MES AL L VPL V + VG +W
Sbjct: 784 ---RLVAQIHDELLFEVEDAQIPEFAALVRGTMESLQQVPALELQLQVPLKVSLSVGRSW 840
Query: 2174 GSLEPFQ 2180
G L P Q
Sbjct: 841 GHLAPLQ 847
>gi|226310992|ref|YP_002770886.1| DNA polymerase I [Brevibacillus brevis NBRC 100599]
gi|226093940|dbj|BAH42382.1| DNA polymerase I [Brevibacillus brevis NBRC 100599]
Length = 882
Score = 241 bits (615), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 263/525 (50%), Gaps = 48/525 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLE----KEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGC 1708
D+ + S++L + SNP L+ + + R+ S+ + R +M + +
Sbjct: 398 FDVYLASYLL---NAAESNPTLDSIAAQYAQTRVLSDEEVYGKGAKRLVPEMDVLSEH-V 453
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
+ A VL + L E+ + L +E PL VLA ME G+ V+ E +Q L
Sbjct: 454 AHKAAAIWQSVPVLREQLAENEMEKLLGELEAPLSMVLALMEKQGVKVNSERLVQMGEDL 513
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
KKL L + Y LAG F++ + + +L+ L LP+ + K K PST L+ L
Sbjct: 514 DKKLAGLTDQIYELAGGAFNINSPKQLGEILFDRLSLPVLK---KTKTGPSTSADVLEKL 570
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
HPI+ I R L KL + + + + T+ +H + Q +TATGRLS +
Sbjct: 571 APYHPIIDAILTFRQLGKLRSTYIEGLTK----EIHTKTSKVHTLYNQATTATGRLSSTD 626
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + +E + KI R+ FIPS++ W +LAADYSQIELR++A
Sbjct: 627 PNLQNIPIRME---------------EGRKI--REAFIPSEDGWYMLAADYSQIELRILA 669
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H S+D LI K D+ T A G SE+ V S R Q K + +GI+YG+ LS
Sbjct: 670 HISQDENLIDAFQKGM-DIHTRTAMDVFGVSEEEVTSLMRRQAKAVNFGIVYGISDYGLS 728
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
+ LN + EA + I+ + F GV W+ V G+V +L R+R+L I+ N
Sbjct: 729 QNLNITRKEAGDFIERYFDVFSGVKRWMDEIVQQAKADGHVTTLLNRRRYLPDIRSSNFN 788
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+S A+R A+N+ QG+AAD+IK+AMI + + + LA+ R+LLQ
Sbjct: 789 LRSFAERTAMNTPIQGTAADVIKLAMIRMQEAL------EEKGLAS---------RMLLQ 833
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VHDELV EV + ++ LV + MESA L VPL V + G TW
Sbjct: 834 VHDELVFEVPDNELEVMRKLVPEVMESALSLDVPLKVDVSDGRTW 878
>gi|229019809|ref|ZP_04176611.1| DNA polymerase I [Bacillus cereus AH1273]
gi|229026035|ref|ZP_04182418.1| DNA polymerase I [Bacillus cereus AH1272]
gi|228735251|gb|EEL85863.1| DNA polymerase I [Bacillus cereus AH1272]
gi|228741480|gb|EEL91678.1| DNA polymerase I [Bacillus cereus AH1273]
Length = 891
Score = 241 bits (615), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 269/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 380 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWP-DDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D ++ + + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRAVAKMKETHAVKSDEEVYGKGAKRAVPELDVVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFIEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + DP
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDPG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDEIVKDAKQKGYVVTLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QGSAADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|90101283|sp|Q7TQ07.2|DPOLN_MOUSE RecName: Full=DNA polymerase nu
Length = 864
Score = 241 bits (615), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 175/562 (31%), Positives = 284/562 (50%), Gaps = 71/562 (12%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH 1705
H+ D G+D + +W++ P D + P+ E V K L + + R A+
Sbjct: 339 HVADFVGLDPRVAAWLIDPSD---TAPSFEDLVAKHLEKSITVKPSST------FREASR 389
Query: 1706 NGCCRRVAQ--------TRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELW 1752
N + V T LCS L W+L + +E+PL+ +LA ME
Sbjct: 390 NTLSQNVFMNLKILYDLTMDLCSKLKAYGLWQLFCT---------LELPLIPILAVMENH 440
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
I VD E + LL +L+ LE++A+ +AG +F + + + +L+G LKL +
Sbjct: 441 KIPVDKEEMERTSALLGARLKELEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLLSQRK 500
Query: 1813 ----KGKQHP-STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQK 1867
G Q+ ST + L+ L+ HP+ +I E+R + K+ + + + + + K
Sbjct: 501 HLPRTGLQNQLSTSEAMLNSLQDLHPLPKLILEYRQVHKIKSTFIDGLLAYMK------K 554
Query: 1868 YTLHGHWLQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFI 1926
++ W QT T TGRLS + PN+Q + +H + K+S + G E + I+ R F+
Sbjct: 555 GSISSTWNQTGTVTGRLSAKHPNIQGISKHPI--KISKPWNFKGKEE-ETVTISPRTLFV 611
Query: 1927 PSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGS 1985
S E LAAD+SQIELR++AH S DP L+ L + DVF+ + ++W + V
Sbjct: 612 -SSEGHTFLAADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDIPIERVTH 670
Query: 1986 QERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQ 2045
+R+QTK+++Y ++YG G L+ L + EA ++ F + + + + CH
Sbjct: 671 MDREQTKKVVYSVVYGAGKERLAACLGVTVLEATHFLERFLQKYKKIKDFAQTVIGQCHS 730
Query: 2046 KGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGV 2105
GYV S+ GR+R L +I + + +++A+RQAVN + QGSAAD+ K+AMI I + +
Sbjct: 731 AGYVTSILGRRRPLPRICAQDQQLRAQAERQAVNFVVQGSAADLCKLAMIRISTAVATS- 789
Query: 2106 YKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA-------L 2158
+L A RL+ Q+HDEL+ EV+ + + E +LV++ MES
Sbjct: 790 ----PTLTA---------RLVAQIHDELLFEVEDTQVPEFAALVRRIMESLQQVQTLELQ 836
Query: 2159 LLVPLLVKIQVGSTWGSLEPFQ 2180
L VPL V + VG +WG L P Q
Sbjct: 837 LQVPLKVNLSVGRSWGHLTPLQ 858
>gi|409195816|ref|ZP_11224479.1| DNA polymerase I [Marinilabilia salmonicolor JCM 21150]
Length = 924
Score = 241 bits (615), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 158/443 (35%), Positives = 230/443 (51%), Gaps = 38/443 (8%)
Query: 1731 LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
++ N+E+PL+ VLA+ME G+ +D E LQ+++ LEK AG +F++
Sbjct: 516 MVSLFDNVEMPLLKVLAEMEYHGVVLDSEALADFAGKLQQRIEALEKGIIEDAGTEFNVG 575
Query: 1791 TAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNC 1850
+ + VL+ LK+ K Q+ ST++ L L+ +HPI+ I E R L KLLN
Sbjct: 576 SPRQVGEVLFDKLKIDAKAKKTKSGQY-STNEETLQKLKDKHPIIEKILEFRGLKKLLNT 634
Query: 1851 TLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGG 1910
+ ++ L I+ T + LH + Q TGRLS PNLQ + + ED G
Sbjct: 635 YVEALPKL--INKETSR--LHTSFNQAVVVTGRLSSSNPNLQNI------PIREED---G 681
Query: 1911 NAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
R F+ + L+ADYSQ+ELRLMAH S+D L+ ++ D+
Sbjct: 682 R--------EMRKAFVVGDSEHLFLSADYSQVELRLMAHLSEDKNLLDAFNRGE-DIHAA 732
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFP 2030
AA+ S + V S R + K +GI+YG+ LSE+LN EAK+ I + SFP
Sbjct: 733 TAAKIFKVSPEEVTSDMRRKAKTANFGIIYGISAFGLSERLNIPRGEAKDIIDGYFESFP 792
Query: 2031 GVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADII 2090
V ++ +S +KGYVE++ GR+R+L I N + A+R A+N+ QG+AADII
Sbjct: 793 AVKEYMDKVISQAREKGYVETMFGRRRYLPDINSRNGVVRGVAERNAINAPIQGAAADII 852
Query: 2091 KIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQ 2150
K+AM+ + ANFQ R++LQVHDEL EV S + E +V+
Sbjct: 853 KMAMVGVERAFRN----------ANFQ-----SRMVLQVHDELNFEVLKSEVAEVREVVK 897
Query: 2151 KCMESAALLLVPLLVKIQVGSTW 2173
K MESA L VPL V + VG W
Sbjct: 898 KEMESAVSLKVPLEVDMGVGDNW 920
>gi|46309579|ref|NP_862905.1| DNA polymerase nu [Mus musculus]
gi|32364063|gb|AAN39837.2| DNA polymerase N [Mus musculus]
Length = 866
Score = 241 bits (614), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 175/562 (31%), Positives = 284/562 (50%), Gaps = 71/562 (12%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH 1705
H+ D G+D + +W++ P D + P+ E V K L + + R A+
Sbjct: 341 HVADFVGLDPRVAAWLIDPSD---TAPSFEDLVAKHLEKSITVKPSST------FREASR 391
Query: 1706 NGCCRRVAQ--------TRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELW 1752
N + V T LCS L W+L + +E+PL+ +LA ME
Sbjct: 392 NTLSQNVFMNLKILYDLTMDLCSKLKAYGLWQLFCT---------LELPLIPILAVMENH 442
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
I VD E + LL +L+ LE++A+ +AG +F + + + +L+G LKL +
Sbjct: 443 KIPVDKEEMERTSALLGARLKELEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLLSQRK 502
Query: 1813 ----KGKQHP-STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQK 1867
G Q+ ST + L+ L+ HP+ +I E+R + K+ + + + + + K
Sbjct: 503 HLPRTGLQNQLSTSEAMLNSLQDLHPLPKLILEYRQVHKIKSTFIDGLLAYMK------K 556
Query: 1868 YTLHGHWLQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFI 1926
++ W QT T TGRLS + PN+Q + +H + K+S + G E + I+ R F+
Sbjct: 557 GSISSTWNQTGTVTGRLSAKHPNIQGISKHPI--KISKPWNFKGKEE-ETVTISPRTLFV 613
Query: 1927 PSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGS 1985
S E LAAD+SQIELR++AH S DP L+ L + DVF+ + ++W + V
Sbjct: 614 -SSEGHTFLAADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDIPIERVTH 672
Query: 1986 QERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQ 2045
+R+QTK+++Y ++YG G L+ L + EA ++ F + + + + CH
Sbjct: 673 MDREQTKKVVYSVVYGAGKERLAACLGVTVLEATHFLERFLQKYKKIKDFAQTVIGQCHS 732
Query: 2046 KGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGV 2105
GYV S+ GR+R L +I + + +++A+RQAVN + QGSAAD+ K+AMI I + +
Sbjct: 733 AGYVTSILGRRRPLPRICAQDQQLRAQAERQAVNFVVQGSAADLCKLAMIRISTAVATS- 791
Query: 2106 YKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA-------L 2158
+L A RL+ Q+HDEL+ EV+ + + E +LV++ MES
Sbjct: 792 ----PTLTA---------RLVAQIHDELLFEVEDTQVPEFAALVRRIMESLQQVQTLELQ 838
Query: 2159 LLVPLLVKIQVGSTWGSLEPFQ 2180
L VPL V + VG +WG L P Q
Sbjct: 839 LQVPLKVNLSVGRSWGHLTPLQ 860
>gi|416054127|ref|ZP_11579105.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype e
str. SCC393]
gi|348003777|gb|EGY44333.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype e
str. SCC393]
Length = 977
Score = 241 bits (614), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 278/551 (50%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 468 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 523
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPL 1742
+ +G+ KNQ+ A T L VLW+ L + + AL +IE+PL
Sbjct: 524 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWEKLEPQPGLVALYQSIELPL 583
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
++VL+ ME G+ +D + N + ++L LE +AY LAG F+L + + +L+G
Sbjct: 584 LSVLSRMERCGVLIDSDALFLQSNEITERLTALEMQAYALAGQPFNLASTKQLQEILFGK 643
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 644 LGLPVLQKTPKGA--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 697
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 698 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 740
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MA+ S D LI ++ D+ AA G +
Sbjct: 741 QAFI-ARDGYKIIAADYSQIELRIMAYLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 798
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 799 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 858
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + A+R A+N+ QG+AADIIK AMI +
Sbjct: 859 AKAQGYVETLFGRRLYLPEINSSNAMRRKGAERVAINAPMQGTAADIIKRAMIKLD---- 914
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 915 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVP 962
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 963 LIVDVGVGENW 973
>gi|144704831|gb|ABP02067.1| DNA polymerase [Bacillus caldolyticus]
Length = 878
Score = 241 bits (614), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 239/466 (51%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 449 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEE 508
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++LR +E++ Y LAG +F++ + + +L+ L+LP+ K K ST L+
Sbjct: 509 LAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV---LKKTKTGYSTSADVLEK 565
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 566 LAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSST 621
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 622 EPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRVL 664
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D L+ + D+ T A SED V R Q K + +GI+YG+ L
Sbjct: 665 AHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGL 723
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 724 AQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNF 783
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLLL
Sbjct: 784 NVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLLL 828
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE ++ LV + ME A L VPL V GSTW
Sbjct: 829 QVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTW 874
>gi|354483980|ref|XP_003504170.1| PREDICTED: DNA polymerase nu, partial [Cricetulus griseus]
Length = 517
Score = 241 bits (614), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 284/558 (50%), Gaps = 75/558 (13%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSE-----AAAAANRSGRWKNQMRRAAHN 1706
G+D + +W++ P D + P+ E V K L ++ + SG NQ N
Sbjct: 5 GLDPRVAAWLIDPSD---TAPSFEDLVAKHLEKSIIVKPSSTFGDTSGNIVNQ------N 55
Query: 1707 GCCR-RVAQ--TRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDM 1758
C R+ T LCS L W+L + +E+PL+ +LA ME I VD
Sbjct: 56 VCLNLRILYDLTMDLCSKLKAYGLWQLFCT---------LELPLIPILAVMENHKIPVDK 106
Query: 1759 EGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHP 1818
E + LL +L+ LE++A+ +AG +F + + + +L+G LKL + ++ K P
Sbjct: 107 EEIERTSALLGARLKELEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLL---SQRKHFP 163
Query: 1819 --------STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL 1870
ST + L+ L+ HP+ +I E+R + K+ + + + + + K ++
Sbjct: 164 RTGLQKQLSTSEAMLNSLQDLHPLPKIILEYRQVHKIKSTFVDGLLAYMK------KGSI 217
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQ 1929
W QT T +GRLS + PN+Q + +H ++ +S + G E + I+ R F+ S
Sbjct: 218 SSTWNQTGTVSGRLSAKHPNIQGISKHPIQ--ISKPRNFKGKEE-ETVTISPRTLFV-SS 273
Query: 1930 ENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD-VFTMIAARWTGRSEDSVGSQER 1988
E LAAD+SQIELR++AH S DP L+ L + D VF+ + ++W + V +R
Sbjct: 274 EGHTFLAADFSQIELRILAHLSGDPELLKLFQESENDDVFSTLTSQWKDIPMEHVTHMDR 333
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
+QTK+++Y ++YG G L+ L + EA ++ F + + + ++ CH GY
Sbjct: 334 EQTKKVVYSVIYGAGKERLAACLGVTVLEATHFLERFLQKYKKIKDFSQTVIAQCHHAGY 393
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
V S+ GR+R L +I + K +++A+RQAVN + QGSAAD+ K+AMI I + +
Sbjct: 394 VTSILGRRRPLPRICAQDQKLRAQAERQAVNFVVQGSAADLCKLAMIRIFAAVATS---- 449
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA-------LLLV 2161
+L A RL+ Q+HDEL+ EV+ S I E LV++ MES L V
Sbjct: 450 -PTLTA---------RLVAQIHDELLFEVEDSQIPEFADLVRRIMESLQQVQSLDLQLQV 499
Query: 2162 PLLVKIQVGSTWGSLEPF 2179
PL V + VG +WG L P
Sbjct: 500 PLKVNLSVGRSWGHLAPL 517
>gi|38146965|gb|AAR11867.1| DNA polymerase I [Bacillus caldolyticus]
Length = 878
Score = 241 bits (614), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 239/466 (51%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 449 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEE 508
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++LR +E++ Y LAG +F++ + + +L+ L+LP+ K K ST L+
Sbjct: 509 LAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV---LKKTKTGYSTSADVLEK 565
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 566 LAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSST 621
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 622 EPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRVL 664
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D L+ + D+ T A SED V R Q K + +GI+YG+ L
Sbjct: 665 AHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGL 723
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 724 AQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNF 783
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLLL
Sbjct: 784 NVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLLL 828
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE ++ LV + ME A L VPL V GSTW
Sbjct: 829 QVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTW 874
>gi|375009844|ref|YP_004983477.1| DNA polymerase I [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288693|gb|AEV20377.1| DNA polymerase I [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 876
Score = 241 bits (614), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 239/466 (51%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 447 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEE 506
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++LR +E++ Y LAG +F++ + + +L+ L+LP+ K K ST L+
Sbjct: 507 LAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV---LKKTKTGYSTSADVLEK 563
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 564 LAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSST 619
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 620 EPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRVL 662
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D L+ + D+ T A SED V R Q K + +GI+YG+ L
Sbjct: 663 AHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGL 721
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 722 AQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNF 781
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLLL
Sbjct: 782 NVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLLL 826
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE ++ LV + ME A L VPL V GSTW
Sbjct: 827 QVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTW 872
>gi|297529110|ref|YP_003670385.1| DNA polymerase I [Geobacillus sp. C56-T3]
gi|297252362|gb|ADI25808.1| DNA polymerase I [Geobacillus sp. C56-T3]
Length = 876
Score = 241 bits (614), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 239/466 (51%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 447 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEE 506
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++LR +E++ Y LAG +F++ + + +L+ L+LP+ K K ST L+
Sbjct: 507 LAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV---LKKTKTGYSTSADVLEK 563
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 564 LAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSST 619
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 620 EPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRVL 662
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D L+ + D+ T A SED V R Q K + +GI+YG+ L
Sbjct: 663 AHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGL 721
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 722 AQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNF 781
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLLL
Sbjct: 782 NVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLLL 826
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE ++ LV + ME A L VPL V GSTW
Sbjct: 827 QVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTW 872
>gi|260581683|ref|ZP_05849480.1| DNA polymerase I [Haemophilus influenzae NT127]
gi|260095276|gb|EEW79167.1| DNA polymerase I [Haemophilus influenzae NT127]
Length = 930
Score = 241 bits (614), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 266/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 444 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLEQATE 499
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 500 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFIQS 559
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 560 NEIATRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 617
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 618 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 673
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 674 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 715
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 716 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 774
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ +GYVE+L GR+ +L I
Sbjct: 775 GLSRQLGISRADAQKYMNLYFQRYPSVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSS 834
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + +I + P+ +
Sbjct: 835 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEVI---RHDPN-------------IEM 878
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ MESAA L+VPL+V++ VG W
Sbjct: 879 IMQVHDELVFEVRSEKVAFFREQIKQHMESAAELVVPLIVEVGVGQNW 926
>gi|33240684|ref|NP_875626.1| DNA polymerase I [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238212|gb|AAQ00279.1| DNA polymerase I 3'-5' exonuclease and polymerase domains
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 985
Score = 241 bits (614), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 255/487 (52%), Gaps = 63/487 (12%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSE--ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
C V TR L + L ++ ELI+ L +E PL +LA+ME GI +D+ +
Sbjct: 537 CGMDVYLTRKLSFRIRSQLQTKGSELIQLLEKVEQPLEPILAEMEARGICIDIPYLKELS 596
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
L + L+ LE++AY AG +F+L + + +L+ L L + K K STD + L
Sbjct: 597 KELNQTLKGLEEQAYKSAGFEFNLNSPKQLGEILFDKLALD-KKKSRKTKTGWSTDANVL 655
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L +HP+VP++ EHRTL+KL++ + ++ L + + +H + Q TATGRLS
Sbjct: 656 ERLEADHPLVPLLVEHRTLSKLVSTYVDALPQL----VEAETGRVHTDFNQAVTATGRLS 711
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
PNLQ + EF R F+P QENW L++ADYSQIELR
Sbjct: 712 SSNPNLQNIPIRTEFSR-----------------RIRKAFLP-QENWKLISADYSQIELR 753
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
++AH S + ++ K DV T+ A ++S+ S ER K + +G++YGMG
Sbjct: 754 ILAHLSGE-EILQEAYKNGDDVHTLTAKILL--EKESINSNERRLGKTINFGVIYGMGAQ 810
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
+ + +EAK+ + FK +P V S+L + KGYV++L GR+R+ + K G
Sbjct: 811 RFARSTGLNQSEAKDFLNRFKERYPKVFSFLELQERLALSKGYVQTLLGRRRYFNFDKNG 870
Query: 2066 ---------NNKEKSKAQRQ---------AVNSICQGSAADIIKIAMINIHSII-VGGVY 2106
N + +A+R A N+ QGS+ADIIKIAM+ + + + V GV
Sbjct: 871 LGRLLGSDPMNIDLKRARRAGMEAQQLRAAANAPIQGSSADIIKIAMVQLATKLKVSGV- 929
Query: 2107 KPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVK 2166
AAN LLLQVHDELVLEV+PSVI+E ++V ME+A L VPL+V
Sbjct: 930 ------AAN---------LLLQVHDELVLEVEPSVIEEVKNIVVSTMENAVHLAVPLVVH 974
Query: 2167 IQVGSTW 2173
+G W
Sbjct: 975 ASIGDNW 981
>gi|417843781|ref|ZP_12489847.1| DNA polymerase I [Haemophilus haemolyticus M21127]
gi|341948529|gb|EGT75155.1| DNA polymerase I [Haemophilus haemolyticus M21127]
Length = 935
Score = 241 bits (614), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 267/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E + +G+ K Q+ A
Sbjct: 449 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIEFKSIAGKGKGQLTFNQIPLEQATE 504
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 505 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFIQS 564
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LE++AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 565 NEIATRLTALEEQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 622
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 623 EELAYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 678
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 679 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 720
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D +LI S+ D+ AA G S D V +++R K + +G++YGM
Sbjct: 721 IMAHLSGDQSLINAFSQGK-DIHRSTAAEIFGVSLDEVTNEQRRNAKAINFGLIYGMSAF 779
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +PGV ++ +GYVE+L GR+ +L I
Sbjct: 780 GLSRQLGISRPDAQKYMDLYFQRYPGVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSS 839
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI I +I + PD +
Sbjct: 840 NAMRRKGAERVAINAPMQGTAADIIKRAMIKIDEVI---RHDPD-------------IEM 883
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV ++ +++ ME+AA L+VPL+V++ VG W
Sbjct: 884 IMQVHDELVFEVRSEKVEFFREQIKQHMEAAAELVVPLIVEVGVGQNW 931
>gi|423557833|ref|ZP_17534135.1| DNA polymerase I [Bacillus cereus MC67]
gi|401192370|gb|EJQ99386.1| DNA polymerase I [Bacillus cereus MC67]
Length = 877
Score = 240 bits (613), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 263/579 (45%), Gaps = 73/579 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK T++ K I LK V IQ G F D+
Sbjct: 366 EMRKHTFDAKRAIVALKWKGVDIQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEK--EVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQ 1714
I +++L P D + K E S E Q A H R+V
Sbjct: 397 IAAYLLDPADTDKDFRAVAKMKETHAVKSDEEVYGKGAKRAVPEQEVVAEH--VARKVHV 454
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
+ K L E E +E+PL VLADME+ G+ VD L +L+
Sbjct: 455 LYDVKQTFEKELEKNEQYELFTELELPLARVLADMEVKGVTVDTNRLRNMGEELAGRLKE 514
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
+E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I
Sbjct: 515 MEQEIYELAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHAI 571
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
+P I +R L KL + + + + S +H + Q T TGRLS EPNLQ +
Sbjct: 572 IPKILHYRQLGKLNSTYIEGLLKVVHDDSSK----IHTRFNQVLTQTGRLSSTEPNLQNI 627
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
+E + KI R FIPS+E WI+ AADYSQIELR++AH +KD
Sbjct: 628 PIRLE---------------EGRKI--RQAFIPSEEGWIMYAADYSQIELRVLAHIAKDE 670
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 671 GLVEAFQHDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGIT 729
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+
Sbjct: 730 RKAAGEFIERYLESFPGVQEYMADIVKDAKQKGYVSTLLNRRRYILEITSRNFNLRSFAE 789
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
R A+N+ QGSAADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 790 RTAMNTPIQGSAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELI 834
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E +++ LV + ME A L VPL V G TW
Sbjct: 835 FEAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|423584886|ref|ZP_17560973.1| DNA polymerase I [Bacillus cereus VD045]
gi|401235078|gb|EJR41551.1| DNA polymerase I [Bacillus cereus VD045]
Length = 877
Score = 240 bits (613), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 253/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|423317224|ref|ZP_17295129.1| DNA polymerase I [Bergeyella zoohelcum ATCC 43767]
gi|405581696|gb|EKB55710.1| DNA polymerase I [Bergeyella zoohelcum ATCC 43767]
Length = 938
Score = 240 bits (613), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 231/459 (50%), Gaps = 39/459 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
T L + L E L IE+PL+ VLADME GI +D+ LQ L++ L+
Sbjct: 515 TFQLYEIFGPQLQKENLENLFFQIEMPLMKVLADMEREGIALDVNWLLQESKDLEQDLKN 574
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
+E+K +TL F+L + + VL+ LKL K Q+ +T + L L H HPI
Sbjct: 575 IEQKIFTLTDNAFNLNSPKQLGEVLFDQLKLDPKAKKTKTGQY-ATSEEVLQKLAHTHPI 633
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
+P+I E+RT KL + + ++ + +S +H + QT+ ATGRL+ PNLQ +
Sbjct: 634 IPLILEYRTYQKLKSTYVDALPT----QISKIDGRVHTSFSQTTAATGRLASLNPNLQNI 689
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
E + I G +++ +++ADYSQIELRL+A S +
Sbjct: 690 PIRTE---RGQQIRGA---------------FRAEKGKKIISADYSQIELRLIAEISGEK 731
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
+I K D+ AA+ D V +R Q K + +GI+YG G L+EQ S
Sbjct: 732 NMIEAFQKGE-DIHASTAAKLFKIPIDEVNKTQRSQAKTVNFGIIYGQGAFALAEQTGLS 790
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
EAK+ I ++ ++P + W+ V + GYVE+L GRKR L I+ N +S A+
Sbjct: 791 RAEAKQMIDAYFQTYPTMKEWMTAQVKKARELGYVETLLGRKRHLKDIQSNNFVVRSHAE 850
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
R AVN+ QGSAADIIKIAMI I + + ++LLQVHDEL+
Sbjct: 851 RNAVNAPIQGSAADIIKIAMIEI---------------SKKLKEENRATKMLLQVHDELI 895
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E ++ +L+ CME+A VPLLV++ VG W
Sbjct: 896 FEAPIEEVEAVTALITSCMENAVKTTVPLLVEVGVGDHW 934
>gi|296505059|ref|YP_003666759.1| DNA polymerase I [Bacillus thuringiensis BMB171]
gi|423657526|ref|ZP_17632825.1| DNA polymerase I [Bacillus cereus VD200]
gi|296326111|gb|ADH09039.1| DNA polymerase I [Bacillus thuringiensis BMB171]
gi|401289082|gb|EJR94803.1| DNA polymerase I [Bacillus cereus VD200]
Length = 877
Score = 240 bits (613), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 253/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|228987834|ref|ZP_04147943.1| DNA polymerase I [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228771882|gb|EEM20339.1| DNA polymerase I [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 891
Score = 240 bits (613), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + IQ G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDIQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVDAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|47564997|ref|ZP_00236040.1| DNA polymerase I [Bacillus cereus G9241]
gi|47557783|gb|EAL16108.1| DNA polymerase I [Bacillus cereus G9241]
Length = 891
Score = 240 bits (613), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + IQ G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDIQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVDAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|423650484|ref|ZP_17626054.1| DNA polymerase I [Bacillus cereus VD169]
gi|401281643|gb|EJR87549.1| DNA polymerase I [Bacillus cereus VD169]
Length = 877
Score = 240 bits (613), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 253/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|423640344|ref|ZP_17615962.1| DNA polymerase I [Bacillus cereus VD166]
gi|401281260|gb|EJR87173.1| DNA polymerase I [Bacillus cereus VD166]
Length = 877
Score = 240 bits (613), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 253/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|229158189|ref|ZP_04286256.1| DNA polymerase I [Bacillus cereus ATCC 4342]
gi|228625147|gb|EEK81907.1| DNA polymerase I [Bacillus cereus ATCC 4342]
Length = 891
Score = 240 bits (613), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + IQ G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDIQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVDAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|88697143|gb|ABD48716.1| thermostable DNA polymerase I [Geobacillus sp. LH8]
Length = 876
Score = 240 bits (613), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 277/561 (49%), Gaps = 62/561 (11%)
Query: 1613 KHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNP 1672
K AAV++ ++ G+ L G + L + +++LL +P +D D+ V+ + + R
Sbjct: 374 KRAAVAL-KWKGIELRGVAFDL--LLAAYLL-NPA--QDAGDVAAVAKMKQYEAVRPDEA 427
Query: 1673 NLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELI 1732
K K+ L E A + R+ A AL L S E
Sbjct: 428 VYGKGAKRSLPDEPTLAEH----------------LVRKAAAIWALERPSLDELRSNEQD 471
Query: 1733 EALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTA 1792
L+ +E PL +LA+ME GI VD + Q + L ++LR +E++ Y LAG +F++ +
Sbjct: 472 GLLIKLEQPLATILAEMEFTGIKVDTKRLEQMGSELAEQLRAVEQRIYELAGQEFNINSP 531
Query: 1793 ADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTL 1852
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 532 KQLGIILFEKLQLPV---LKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYI 588
Query: 1853 GSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNA 1912
+ + + T K +H + Q T TGRLS EPNLQ + +E
Sbjct: 589 EGLLKV--VHPDTGK--VHTMFNQALTQTGRLSSAEPNLQNIPIRLE------------- 631
Query: 1913 EVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIA 1972
+ KI R F+PS+ +W++ AADYSQIELR++AH + D LI + D+ T A
Sbjct: 632 --EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHIADDDNLIEAFRR-DLDIHTKTA 686
Query: 1973 ARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGV 2032
SE+ V + R Q K + +G++YG+ L++ LN + EA E I+ + +SFPGV
Sbjct: 687 MDIFHVSEEEVTATMRRQAKAVNFGVVYGISDYGLAQNLNITRKEAAEFIERYFASFPGV 746
Query: 2033 ASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKI 2092
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK
Sbjct: 747 KRYMETIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERTAMNTPIQGSAADIIKK 806
Query: 2093 AMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKC 2152
AMI+ LAA + + + RLLLQVHDEL+LE ++ LV +
Sbjct: 807 AMID---------------LAARLKEERLQARLLLQVHDELILEAPKEEMERLCQLVPEV 851
Query: 2153 MESAALLLVPLLVKIQVGSTW 2173
ME A L VPL V G TW
Sbjct: 852 MEQAVALRVPLKVDYHYGPTW 872
>gi|398349463|ref|ZP_10534166.1| DNA polymerase I [Leptospira broomii str. 5399]
Length = 913
Score = 240 bits (613), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 261/525 (49%), Gaps = 45/525 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKK----RLSSEAAAAANRSGRWKNQMRRAAHNGC 1708
D + S+IL P+ + +L KE+ S N+ W+ ++ + +
Sbjct: 426 FDTMLASYILQPESRHHNMDDLAKELLNYQTIHYSDLVGTGKNKKNLWEVELEKVSEY-A 484
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
T L + L K + + I++PL+ VLADME GI +D E +
Sbjct: 485 SEDADITLRLYNSLRKPVKDSGMESVYKEIDLPLIRVLADMEKAGIAIDTEYFAELSKDF 544
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
Q++++ L + + AG +F++ + ++ VL+ LKL + + G STD L+ L
Sbjct: 545 QREVKDLVRHIHKYAGREFNIASTKELQKVLFEDLKLKVIKKTQTGY---STDHEVLEEL 601
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
EHPI+ + ++R KL++ + ++ ++ +S + +H ++ T ATGRLS +
Sbjct: 602 LGEHPIIEKLLDYRKYTKLISTYVETLPTM----VSAKDGRIHTNYNMTIAATGRLSSTD 657
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ N I + R FI +++ LL+ DYSQIELR+MA
Sbjct: 658 PNLQ-----------NIPIREKEGRL------IRKGFISGHKDFELLSLDYSQIELRIMA 700
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H S DPA++ K D+ A+ G SE V + RD+ K + + ++YG+ P LS
Sbjct: 701 HVSGDPAMVDAYKKGI-DIHKRTASALYGVSETDVTPEMRDKAKVVNFSVIYGVTPYGLS 759
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
L +EAK I+ + + +PGV ++ ++ C QKGYVE+LKGR+R + I N
Sbjct: 760 RNLRVPRDEAKGFIERYLTQYPGVQKYMDETIAFCEQKGYVETLKGRRRPVPDINSTNRM 819
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
K A+R A+N+ QG+ AD+IKIAM++IH I +K +LLLQ
Sbjct: 820 SKEAARRVAINTPIQGTCADMIKIAMMHIHKRIADQSWK---------------SKLLLQ 864
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VHDELV EV E + ++ ME+A L VP+ V + G+ W
Sbjct: 865 VHDELVFEVHKKEKDEFLKSAKELMENALPLTVPIKVSGKFGANW 909
>gi|121534305|ref|ZP_01666129.1| DNA polymerase I [Thermosinus carboxydivorans Nor1]
gi|121307075|gb|EAX47993.1| DNA polymerase I [Thermosinus carboxydivorans Nor1]
Length = 874
Score = 240 bits (613), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 240/458 (52%), Gaps = 42/458 (9%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L VL + LV+ L E IE+PLV VL++ME+ GI VD+ + ++ L
Sbjct: 455 LYPVLKEKLVAAGLAELYEEIELPLVPVLSEMEIAGIRVDLTQLDALAQEITDRIETLLT 514
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ Y LAG +F++ + + ++L+ LKLP+ + K K STD L+ L +HP++
Sbjct: 515 EIYQLAGQEFNVNSTRQLGHILFEVLKLPVIK---KTKTGYSTDAEVLEKLAGQHPLIDC 571
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
+ E+R L KL + L + L R +H H+ QT TATGRLS EPNLQ +
Sbjct: 572 LLEYRLLTKLKSTYLDGLRDLIRADTGR----IHTHFNQTVTATGRLSSSEPNLQNIPIR 627
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQ-ENWILLAADYSQIELRLMAHFSKDPAL 1956
E R+ F+P +WI+ +ADYSQIELR++AH S D L
Sbjct: 628 TEIGR-----------------RIRELFVPGPGYDWIM-SADYSQIELRVLAHMSGDDNL 669
Query: 1957 IGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSN 2016
I + + D+ T AA G V +Q R + K + +GI+YG+ LS + S
Sbjct: 670 IDAF-RHNQDIHTHTAAEVFGVPMAEVTAQMRARAKAVNFGIVYGISDFGLSRDIGVSRK 728
Query: 2017 EAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQ 2076
EA + I S+ + + GV +++ ++ Q+GYV +L GR+RFL I GN +++ A+R
Sbjct: 729 EAGQYIDSYFAKYRGVKNYIDNVINLARQQGYVTTLFGRRRFLPDINSGNFNQRAFAERT 788
Query: 2077 AVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLE 2136
A+N+ QG+AADIIK AMI ++ + + + RLLLQVHDELVLE
Sbjct: 789 AMNTPIQGTAADIIKKAMITVYR---------------QLRDRRLKSRLLLQVHDELVLE 833
Query: 2137 VDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
V + LV++ ME A L VPL+ ++ G+ W
Sbjct: 834 VAEAERVLVAQLVKQAMEDAVTLAVPLVADVKTGANWA 871
>gi|325924860|ref|ZP_08186294.1| DNA polymerase I [Xanthomonas perforans 91-118]
gi|325544705|gb|EGD16054.1| DNA polymerase I [Xanthomonas perforans 91-118]
Length = 933
Score = 240 bits (613), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 236/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L SE +E + +IE+PLV+VLA +E G+ VD + L K++
Sbjct: 510 TLRLHRVLGPRLASEPGLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 569
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 570 AAQQKATELAGRSFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 627
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R LAKL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 628 LPRVILEYRGLAKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 683
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P+ L+A DYSQIELR+MAH S D
Sbjct: 684 IPIRTE---------------DGRRIR-RAFVAPAGRK--LIACDYSQIELRIMAHLSGD 725
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G DV AA GR+ D+V ER K + +G++YGM L+ QL
Sbjct: 726 PGLVGAFES-GADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGI 784
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 785 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 844
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+N+ D +A + Q R +++LQVHDEL
Sbjct: 845 ERAAINAPMQGTAADIIKRAMVNV-----------DGWIANHAQ----RAKMILQVHDEL 889
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M AA L VPL+V VG W
Sbjct: 890 VFEADIDFVDTLLSEVTTRMAGAAELRVPLMVDSGVGDNW 929
>gi|291514801|emb|CBK64011.1| DNA polymerase I [Alistipes shahii WAL 8301]
Length = 958
Score = 240 bits (613), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 241/461 (52%), Gaps = 41/461 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
T L L+ ++ L IE P++ VLAD+E+ G+ +D E L +KL
Sbjct: 533 TLQLKQALYPMIEQIGLQHLYFEIEEPMIAVLADIEMAGMRIDSEALAVYAVELNRKLAE 592
Query: 1775 LEKKAYTLAGM-KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE T AG ++ +A + VL+G +++ K KQ TD+ L L +H
Sbjct: 593 LEAAIRTEAGEPNLNINSARQLGEVLFGKMRIAEKPKMTKTKQF-CTDEDYLQLFARKHR 651
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
IV +I E+R + KLL+ + ++ L ++ ST + +H + Q TATGRLS PNLQ
Sbjct: 652 IVDLILEYRGVKKLLSTYVEALPQL--VNRSTGR--IHTSFNQAVTATGRLSSTNPNLQN 707
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ D R FIPS ++ +LL+ADYSQ+ELRLMAH S D
Sbjct: 708 IPVR-----------------DDMGRRIRKAFIPSDDDHLLLSADYSQVELRLMAHLSGD 750
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
+LI HG D+ AA+ ++ D V S+ER + K +GI+YG+ LS++L
Sbjct: 751 ESLIAAFE--HGEDIHAATAAKLFNKTLDEVTSEERRRAKTANFGIIYGISAFGLSQRLE 808
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
EAKE I + +S+PGV ++ V ++G+V ++ GR+R+L+ I N +
Sbjct: 809 IPRKEAKEIIDGYFASYPGVKKYMDNVVEKAKEEGFVSTIFGRRRYLNDIASHNAIARGL 868
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R AVN+ QGSAADI+KIAMIN+H F R R++LQVHDE
Sbjct: 869 AERNAVNAPIQGSAADIMKIAMINVHR---------------RFAAEGIRSRVILQVHDE 913
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV+++ S + ++V +CMESAA L V L+ VG W
Sbjct: 914 LVVDMLRSEQERVTAIVTECMESAAQLKVRLIADAGVGGNW 954
>gi|229112052|ref|ZP_04241595.1| DNA polymerase I [Bacillus cereus Rock1-15]
gi|228671375|gb|EEL26676.1| DNA polymerase I [Bacillus cereus Rock1-15]
Length = 891
Score = 240 bits (613), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 253/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|432114604|gb|ELK36445.1| DNA polymerase theta [Myotis davidii]
Length = 557
Score = 240 bits (613), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 14/304 (4%)
Query: 501 DCLDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTS--AGKSFV 557
D L L++W LP+ + Y G+ K++ WQ ECL + VL+ +NLVY + +G +
Sbjct: 73 DKLLLANWGLPTAVLEKYHNFGVKKMFKWQAECLLLGEVLEGKNLVYSENLYGLSGATLT 132
Query: 558 AEILMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDT 617
+L R++ K AL +LP+VS+ EK +L+ L + +G V Y G+
Sbjct: 133 CILLTDERVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPKGHFSSL 192
Query: 618 SVAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEG 677
+AVCTIE+AN L+N ++EE ++ +GI+V+DELHM+ D +RGYLLELLLTK+ Y +
Sbjct: 193 DIAVCTIERANGLINSLIEENKMDLLGIVVVDELHMLGDSHRGYLLELLLTKICYITQKS 252
Query: 678 TSDSSSGENSGTSSGKADP-AHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEY 736
S + A P ++ +QIVGMSAT+PN+ VA WL A LY T+FRPVPL E
Sbjct: 253 AS---------CQADLASPLSYAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLVES 303
Query: 737 IKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTA 796
+K+GN+IY M +VR + G D DH+V LC E ++E HSVL+FC S+K CE A
Sbjct: 304 VKIGNSIYDSSMKLVREFQPMLQVKG-DEDHVVSLCYETIRENHSVLLFCPSKKWCEKLA 362
Query: 797 RHVS 800
+++
Sbjct: 363 DNIA 366
>gi|374296944|ref|YP_005047135.1| DNA polymerase I [Clostridium clariflavum DSM 19732]
gi|359826438|gb|AEV69211.1| DNA polymerase I [Clostridium clariflavum DSM 19732]
Length = 896
Score = 240 bits (612), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 151/442 (34%), Positives = 242/442 (54%), Gaps = 40/442 (9%)
Query: 1732 IEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYT 1791
I+ IE+PLV VLADME +G V++ + L +K++ L K Y LAG +F++ +
Sbjct: 491 IKLYYEIELPLVEVLADMEYYGFKVNVNELMSISRQLDEKIQELTVKIYELAGEEFNINS 550
Query: 1792 AADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCT 1851
+ +L+ L+LP+ + K K STD L+ L +H I+P I E+R L KL +
Sbjct: 551 TKQLGVILFEKLELPVIK---KTKTGYSTDAEVLEELADKHEIIPKILEYRQLIKLKSTY 607
Query: 1852 LGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGN 1911
+ + S+ I+ T K +H + QT T TGR+S EPNLQ + ++ +M
Sbjct: 608 IDGLMSV--INPVTGK--IHSSFNQTVTVTGRISSTEPNLQNIP--IKLEMGR------- 654
Query: 1912 AEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMI 1971
N R F+ S EN+ L+ ADYSQIELR++AH + D +I +K + D+
Sbjct: 655 --------NIRKAFVSSDENYRLVDADYSQIELRVLAHITGDVNMIEAFNK-NEDIHAST 705
Query: 1972 AARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPG 2031
A++ G + V R + K + +GI+YG+G +LS+ L + EA+ I + +
Sbjct: 706 ASKVFGVPINEVTPLLRSKAKAVNFGIVYGIGDFSLSKDLGITRKEARAYIDGYLEKYAN 765
Query: 2032 VASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIK 2091
V ++H V + G+V +L GR+R+L ++K N +S +R A+N+ QGSAADIIK
Sbjct: 766 VKKYMHDIVVQGKEFGFVTTLFGRRRYLPELKSSNFNIRSFGERIAMNTPIQGSAADIIK 825
Query: 2092 IAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQK 2151
IAM+ ++ + K + RL+LQVHDEL++E S ++E +++++
Sbjct: 826 IAMVKVYK---------------ELKARKLKSRLILQVHDELIIEAHVSEVEEVTTILKE 870
Query: 2152 CMESAALLLVPLLVKIQVGSTW 2173
ME+A L VPL V+++ GS W
Sbjct: 871 SMENAVKLSVPLSVEVKSGSNW 892
>gi|330801495|ref|XP_003288762.1| hypothetical protein DICPUDRAFT_34531 [Dictyostelium purpureum]
gi|325081196|gb|EGC34721.1| hypothetical protein DICPUDRAFT_34531 [Dictyostelium purpureum]
Length = 489
Score = 240 bits (612), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 255/491 (51%), Gaps = 56/491 (11%)
Query: 1730 ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTL-AGMKFS 1788
+ LNIE+ ++ + A ME GIG + + ++L+Q+K+ YL+ KA+ L G FS
Sbjct: 16 KFFNIFLNIEMKILPIFAMMEYVGIGFNEKVSESGKHLIQRKIEYLDYKAHVLLPGKTFS 75
Query: 1789 LYTAADIANVLYGHLKLPIPE-------GHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEH 1841
L + +++ +L+ LK+P PE + KQ+ T+ L+ + H HP+ +I E+
Sbjct: 76 LSSGDNVSEILFTDLKIPPPEIAKSTSRKNRLKKQYYLTNSVVLEQINHYHPLPSIISEY 135
Query: 1842 RTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFK 1901
R L ++ + + S Q ++ QT TGR++ME PNLQ + H ++FK
Sbjct: 136 RVLTHHISHYIDVLGKYLFRSDHYQMDRIYSTIQQTIVPTGRIAMENPNLQNISHPIDFK 195
Query: 1902 ------MSNEDIYGGNAEVDHCK---------------------INARDFFIPSQENWIL 1934
S E I N +D + ++ R+ FIP+ L
Sbjct: 196 RAPEIDFSQESIKSFNESLDRFEYLSDEHYLSLLQMDKSCDVITVSIRNAFIPAN-GCKL 254
Query: 1935 LAADYSQIELRLMAHFSKDPALIGLLS-KPHGDVFTMIAARWTGRSEDSVGSQERDQTKR 1993
L+ DY Q+ELR++ H S+DP L+ + + + D+F +A + DSV +R Q K
Sbjct: 255 LSVDYGQLELRILTHLSQDPKLMEMFNCNINIDIFKYVAHQVGNIPYDSVTDSDRQQAKH 314
Query: 1994 LIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLK 2053
L+YGILYGMG +++ +L+ +A+ K+++FK ++ + +L + + Q GY+ +L
Sbjct: 315 LVYGILYGMGIKSIASELHIPIEQARGKLENFKKTYNKLIEYLEMVEENVIQNGYIATLF 374
Query: 2054 GRKRFLSKI---KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
GR R S I K NN E SK +R A NSI QG+AADI K+AMI I + +K
Sbjct: 375 GRVRNFSNIHSCKIDNN-EISKVKRAARNSIPQGTAADIAKMAMIKIQDELDKNHFK--- 430
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
+++LQ+HDE++ EV + + ++ +++ ME+ L V L +K+ +G
Sbjct: 431 ------------AQMILQLHDEILFEVPENELYQSAQIIKYSMENVVKLSVSLPIKMSIG 478
Query: 2171 STWGSLEPFQA 2181
WGSL+PF+
Sbjct: 479 PNWGSLKPFEV 489
>gi|403070339|ref|ZP_10911671.1| DNA polymerase I [Oceanobacillus sp. Ndiop]
Length = 879
Score = 240 bits (612), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 269/536 (50%), Gaps = 47/536 (8%)
Query: 1642 LLLSPVHLKDGI--DMCIVSWILWPDDERSSNPNLEKEVKKR--LSSEAAAAANRSGRWK 1697
LL + +H++ GI DM + S++L P + P + + K L E +
Sbjct: 383 LLRNGIHIQ-GISFDMLLTSYLLNPAENSHDIPAISSRMGKNDVLFDEEVYGKGAKQKIP 441
Query: 1698 NQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVD 1757
Q + A H R+ A AL + + L + E E L +E+PL +L +ME G+ VD
Sbjct: 442 EQEKVAEH--VVRKTAALFALKDEMSEQLRANEQYELLKELEMPLALILGEMEHLGVQVD 499
Query: 1758 MEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQH 1817
+ + L+++L LEK+ + LAG F+L + + +L+ LKLP+ + K K
Sbjct: 500 ISKLEEMGADLKERLNTLEKEVHELAGESFNLNSPKQLGPILFDKLKLPVIK---KTKTG 556
Query: 1818 PSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQT 1877
ST L+ L++EH I+P + +R L KL + + + + + T K +H + Q
Sbjct: 557 YSTAADVLEQLQNEHEIIPKLLMYRQLGKLQSTYIEGLLKV--VKKDTMK--IHTRFNQA 612
Query: 1878 STATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAA 1937
T TGRLS +PNLQ + +E + KI R F+P++++WI+ AA
Sbjct: 613 LTQTGRLSSIDPNLQNIPIRLE---------------EGRKI--RQAFVPAKKDWIMFAA 655
Query: 1938 DYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYG 1997
DYSQIELR++AH + D L+ D+ T A +D V S R Q K + +G
Sbjct: 656 DYSQIELRVLAHIANDEKLVAAFQNDL-DIHTQTAMDVFHVEKDEVTSNMRRQAKAVNFG 714
Query: 1998 ILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKR 2057
I+YG+ LS+ L + AK I+ + S+PGV ++ V KGYV +L R+R
Sbjct: 715 IVYGISDYGLSQNLGITRKAAKNFIERYFDSYPGVRLYMDEIVQEAKHKGYVTTLMNRRR 774
Query: 2058 FLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQ 2117
+L +I N +S A+R A+N+ QGSAADIIK AMI++H + D L
Sbjct: 775 YLPEINSRNFNLRSFAERTAMNTPIQGSAADIIKKAMIDLHWKL------KDEKL----- 823
Query: 2118 MLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
R+LLQVHDEL+LE + + +V + ME L VPL V + G++W
Sbjct: 824 ----ESRMLLQVHDELILEAPKEELDKLKEIVPEMMEKTVNLNVPLKVDYEYGNSW 875
>gi|145636579|ref|ZP_01792246.1| DNA polymerase I [Haemophilus influenzae PittHH]
gi|145270105|gb|EDK10041.1| DNA polymerase I [Haemophilus influenzae PittHH]
Length = 930
Score = 240 bits (612), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 266/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 444 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESIAGKGKSQLTFNQIPLEQATE 499
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 500 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFMQS 559
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 560 NEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 617
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 618 EELAYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 673
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 674 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 715
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 716 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 774
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ +GYVE+L GR+ +L I
Sbjct: 775 GLSRQLGISRPDAQKYMDLYFQRYPSVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSS 834
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + +I + P+ +
Sbjct: 835 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEVI---RHDPN-------------IEM 878
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 879 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAELVVPLIVEVGVGQNW 926
>gi|372222155|ref|ZP_09500576.1| DNA polymerase I [Mesoflavibacter zeaxanthinifaciens S86]
Length = 944
Score = 240 bits (612), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 228/436 (52%), Gaps = 38/436 (8%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IEIPL+ VLADME GI +D L ++ LE+K + AG +F++ + +
Sbjct: 543 IEIPLLRVLADMESEGINLDKNFLNSLSTELDNDIKSLEQKVFKAAGEEFNIGSPKQLGE 602
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+G LKL K Q ST + L L EH I+ + ++R L KL + + ++
Sbjct: 603 ILFGKLKLVDKPKKTKTGQF-STSEDVLSYLAKEHEIIKHVLDYRGLTKLKSTYVDALPE 661
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
++ T + +H ++QT ATGRLS PNLQ + E
Sbjct: 662 --QVEEVTGR--VHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQ-------------- 703
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R F+P EN+ILLAADYSQIELR++A S++ +I K D+ A++ G
Sbjct: 704 ---VRKAFVPRNENYILLAADYSQIELRIIAALSEEDTMIEAF-KNGMDIHASTASKVFG 759
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
+ V ++R K + +GI+YG+ LS Q + S EAKE I ++ ++P + +++
Sbjct: 760 VPLEEVTREQRSNAKTVNFGIIYGVSAFGLSNQTDLSRAEAKELIDTYYKTYPKLRNYIS 819
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
V + GYV+++ GR+R+L I GN + A+R AVN+ QGSAADIIKIAMINI
Sbjct: 820 EQVDFARENGYVQTVLGRRRYLKDINAGNQVVRGAAERNAVNAPIQGSAADIIKIAMINI 879
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA 2157
H + G YK ++LLQVHDELV + ++E L+Q ME+A
Sbjct: 880 HKKLEEGKYK---------------TKMLLQVHDELVFDCHKDELEEMKQLIQSEMENAY 924
Query: 2158 LLLVPLLVKIQVGSTW 2173
L VPL V++ +G W
Sbjct: 925 KLSVPLDVEVGIGQNW 940
>gi|423631302|ref|ZP_17607049.1| DNA polymerase I [Bacillus cereus VD154]
gi|401263875|gb|EJR69991.1| DNA polymerase I [Bacillus cereus VD154]
Length = 877
Score = 240 bits (612), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 253/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLCNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|229198735|ref|ZP_04325433.1| DNA polymerase I [Bacillus cereus m1293]
gi|228584757|gb|EEK42877.1| DNA polymerase I [Bacillus cereus m1293]
Length = 891
Score = 240 bits (612), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDVQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVDAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|294507650|ref|YP_003571708.1| DNA polymerase I [Salinibacter ruber M8]
gi|294343979|emb|CBH24757.1| DNA polymerase I [Salinibacter ruber M8]
Length = 949
Score = 240 bits (612), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 276/585 (47%), Gaps = 80/585 (13%)
Query: 1596 RDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDM 1655
RD K N+K + +LK V VG +L D
Sbjct: 434 RDTEKLGHNLKYDLLLLKQHGVE---------VGGTL--------------------FDT 464
Query: 1656 CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRW--KNQMRR----AAHNGCC 1709
+ +++ P++ N NL+ + L+ + A+ G ++ MR A C
Sbjct: 465 MVAHYLVAPEE----NHNLDDVARSVLNYKMVPIADLIGDETDRDSMREVDVETAAPYAC 520
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
+ L L L +++ +IE PLV+VLA ME GI +D + + L+
Sbjct: 521 EDADISYRLADELEAQLEDGNVLDVAHDIEFPLVHVLATMEHTGIRLDTDVLDEILAGLE 580
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
++L +E++ + LAG +F++ + + +L+ L LP+ GK PST + L L
Sbjct: 581 ERLSGIEEEVFELAGEEFNINSTQQLGEILFEKLDLPVVSKTPTGK--PSTKESVLQELS 638
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
EH I ++ + R+ KL + L S+ L + + LH + QT TATGRLS +P
Sbjct: 639 TEHEIPGLVLDWRSTYKLKSTYLDSLGEL----VHPETGRLHTSFNQTRTATGRLSSSDP 694
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + E R F+P ++ W LL+ADY+QIELR++A
Sbjct: 695 NLQNIPIRTEMGR-----------------QIRRAFVP-KDGWALLSADYAQIELRILAA 736
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
S D A+ + GD+ T AAR G + V ++R + K + YGI YG+ P L++
Sbjct: 737 MSGDDAMRATFQE-GGDIHTDAAARVYGIDPEDVTPEQRSKAKEVNYGIPYGISPWGLAQ 795
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
++ +EA++ IK ++ S+PGV+ L+ V KGY E+L GR+R+L I N+
Sbjct: 796 RMRMPVDEAQDIIKQYRKSYPGVSQLLNELVEKAQDKGYAETLLGRRRYLPDIDSSNSNA 855
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S A+R AVN QG+ AD+IKIAM IH + G + ++LLQV
Sbjct: 856 RSAAERVAVNMPIQGTQADMIKIAMNRIHDRLAGDDWA---------------TQMLLQV 900
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESA-ALLLVPLLVKIQVGSTW 2173
HDELV EV P + A +++ M A L VP+ V + G W
Sbjct: 901 HDELVFEVPPDELDAAQTMIDDEMRDALPLDDVPVTVDMDTGDNW 945
>gi|306991581|pdb|2XO7|A Chain A, Crystal Structure Of A Da:o-Allylhydroxylamine-Dc Basepair
In Complex With Fragment Dna Polymerase I From Bacillus
Stearothermophilus
Length = 580
Score = 240 bits (612), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 239/466 (51%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 151 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEE 210
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++LR +E++ Y LAG +F++ + + +L+ L+LP+ K K ST L+
Sbjct: 211 LAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV---LKKSKTGYSTSADVLEK 267
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 268 LAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSST 323
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 324 EPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRVL 366
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D L+ + D+ T A SED V R Q K + +GI+YG+ L
Sbjct: 367 AHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGL 425
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 426 AQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNF 485
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLLL
Sbjct: 486 NVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLLL 530
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE ++ LV + ME A L VPL V GSTW
Sbjct: 531 QVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTW 576
>gi|226225416|ref|YP_002759522.1| DNA polymerase I [Gemmatimonas aurantiaca T-27]
gi|226088607|dbj|BAH37052.1| DNA polymerase I [Gemmatimonas aurantiaca T-27]
Length = 984
Score = 240 bits (612), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 179/533 (33%), Positives = 272/533 (51%), Gaps = 55/533 (10%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAH 1705
G D + S++L D R S+ L+ ++L A G+ K Q+ A
Sbjct: 495 GFDTMLASYVL--DPGRRSH-GLDLLALEQLGHTMTAYDTLVGKGKTQLPFDVAPVDTAR 551
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDME--GCLQ 1763
+ C V T L + L +L L+ IE+PLV+VLA+ME GI +D++ L+
Sbjct: 552 DYSCEDVDITMRLRAKLEPMLAEHALLSLFQEIEVPLVSVLAEMEWEGIAIDLDWFASLK 611
Query: 1764 ARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKH 1823
AR ++ +E+ Y AG +F++ + + +L+ L LP+ K PSTD
Sbjct: 612 ARFAAERG--RVEQAIYAEAGEEFNINSNPKLRAILFEKLGLPV---KKKTATGPSTDAS 666
Query: 1824 CLDLLRHEHPIVP-VIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATG 1882
L L E ++P ++ E+R + KL + ++ L + + LH + QT +ATG
Sbjct: 667 VLQELAEEGHVLPTLLMEYREIFKLEGTYIDALPRL----VHPRDRRLHTSYSQTVSATG 722
Query: 1883 RLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQI 1942
RLS +PNLQ + E DI G F+P +E W LL+ADYSQI
Sbjct: 723 RLSSHDPNLQNIPIRREL---GRDIRRG--------------FVP-REGWRLLSADYSQI 764
Query: 1943 ELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGM 2002
ELR++AH S DPA + K GD+ AA G + V S+ R + K + + +YG
Sbjct: 765 ELRVLAHLSADPAFVSAF-KAGGDIHRQTAAIIFGVPLEDVTSEMRARAKTINFATIYGQ 823
Query: 2003 GPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKI 2062
G + LS QL ++ EAK I+++ F GV +L V +GYVE+L R+R++ ++
Sbjct: 824 GAHALSRQLRITNAEAKAFIETYFERFAGVRGFLDQCVVDARARGYVETLFKRRRYIPEL 883
Query: 2063 KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR 2122
K N ++ +R A N+ QGSAAD+IKIAMIN+ + I D+ A+
Sbjct: 884 KERNFNIRAFGERVAQNAPIQGSAADLIKIAMINVRNAI-------DAEGLAS------- 929
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGS 2175
R+LLQVHDELV E+ +LV++ ME AA+L VPLLV++ +G+ W S
Sbjct: 930 -RMLLQVHDELVFELPVEEADTLSALVKREMEGAAVLNVPLLVEMGLGTDWVS 981
>gi|428183950|gb|EKX52806.1| hypothetical protein GUITHDRAFT_64797, partial [Guillardia theta
CCMP2712]
Length = 425
Score = 239 bits (611), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 158/444 (35%), Positives = 235/444 (52%), Gaps = 33/444 (7%)
Query: 1742 LVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYG 1801
+ VL ME+ GIG L + +++KL LE++A L G L + + +VL+
Sbjct: 3 FILVLCLMEMNGIGFSPLQLLDQKRKMERKLIELEEEATKLVGHPVLLSSPQQLCSVLFE 62
Query: 1802 HLKLPIPEGHNK-------GKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
LKLP P +N Q ST++ L L + HP+ +I EHR + K+L +
Sbjct: 63 ELKLPPPNLNNNSTMKFKGANQQYSTNEETLQSLINLHPLPAIILEHRHICKMLQGFVVP 122
Query: 1855 ICSLA-RISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAE 1913
+C A + ++ W Q ST TGRLS +PNLQ V + I GN +
Sbjct: 123 LCDRAVKCPQGNTVSSIFSSWSQISTCTGRLSSSDPNLQNVPKA-------DSIRFGNRQ 175
Query: 1914 VDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAA 1973
++N R+ F+ EN +LLAADY Q ELR+MAHF DP+LI LLS+ + +T IA+
Sbjct: 176 DMTKELNIRNAFVARNEN-VLLAADYVQCELRIMAHFCNDPSLIKLLSE-NNCPYTGIAS 233
Query: 1974 RWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVA 2033
+ DS+ +QER K ++ G+LYG+G +L+ +L S EA I +F S+FP V
Sbjct: 234 HVLKKPFDSITTQERSTFKTVVLGLLYGLGCKSLAARLGLSEQEASRHISTFYSAFPKVK 293
Query: 2034 SWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG---NNKEKSKAQRQAVNSICQGSAADII 2090
+ + +GY +L GR+R L+ I N+ +++ A+RQAVN++ QG+AADII
Sbjct: 294 EFQSSCRNIVKSRGYAVTLSGRQRPLADISLNGPENSAKRAYAERQAVNTVIQGTAADII 353
Query: 2091 KIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQ 2150
K AM I+ + K Q L CRL LQ+HDELV E+ + + ++
Sbjct: 354 KRAM----KFILLDLKK---------QGLAETCRLCLQIHDELVFELPKDQLPKFTKIIN 400
Query: 2151 KCMESAALLLVPLLVKIQVGSTWG 2174
+ M + L VP+ +K VGSTWG
Sbjct: 401 RGMTESTTLHVPMRIKFSVGSTWG 424
>gi|229129871|ref|ZP_04258837.1| DNA polymerase I [Bacillus cereus BDRD-Cer4]
gi|229147147|ref|ZP_04275505.1| DNA polymerase I [Bacillus cereus BDRD-ST24]
gi|228636257|gb|EEK92729.1| DNA polymerase I [Bacillus cereus BDRD-ST24]
gi|228653562|gb|EEL09434.1| DNA polymerase I [Bacillus cereus BDRD-Cer4]
Length = 891
Score = 239 bits (611), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 253/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|346726843|ref|YP_004853512.1| DNA polymerase I [Xanthomonas axonopodis pv. citrumelo F1]
gi|346651590|gb|AEO44214.1| DNA polymerase I [Xanthomonas axonopodis pv. citrumelo F1]
Length = 933
Score = 239 bits (611), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 237/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L SE +E + +IE+PLV+VLA +E G+ VD + L K++
Sbjct: 510 TLRLHRVLGPRLASEPGLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 569
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 570 AAQQKATELAGRSFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 627
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R LAKL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 628 LPGVILEYRGLAKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 683
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P+ L+A DYSQIELR+MAH S D
Sbjct: 684 IPIRTE---------------DGRRIR-RAFVAPAGRK--LIACDYSQIELRIMAHLSGD 725
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G DV AA GR+ D+V ER K + +G++YGM L+ QL
Sbjct: 726 PGLVGAFES-GADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGI 784
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 785 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 844
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+N+ D +A + Q R +++LQVHDEL
Sbjct: 845 ERAAINAPMQGTAADIIKRAMVNV-----------DGWIADHAQ----RAKMILQVHDEL 889
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + + +S V M AA L VPL+V VG W
Sbjct: 890 VFEADINFVDTLLSEVTTRMAGAAELRVPLVVDSGVGDNW 929
>gi|345100599|pdb|2XY6|A Chain A, Crystal Structure Of A Salicylic Aldehyde Basepair In
Complex With Fragment Dna Polymerase I From Bacillus
Stearothermophilus
Length = 581
Score = 239 bits (611), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 239/466 (51%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 152 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEE 211
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++LR +E++ Y LAG +F++ + + +L+ L+LP+ K K ST L+
Sbjct: 212 LAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV---LKKSKTGYSTSADVLEK 268
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 269 LAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSST 324
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 325 EPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRVL 367
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D L+ + D+ T A SED V R Q K + +GI+YG+ L
Sbjct: 368 AHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGL 426
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 427 AQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNF 486
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLLL
Sbjct: 487 NVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLLL 531
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE ++ LV + ME A L VPL V GSTW
Sbjct: 532 QVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTW 577
>gi|404487040|ref|ZP_11022227.1| DNA polymerase I [Barnesiella intestinihominis YIT 11860]
gi|404335536|gb|EJZ62005.1| DNA polymerase I [Barnesiella intestinihominis YIT 11860]
Length = 926
Score = 239 bits (611), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 278/549 (50%), Gaps = 53/549 (9%)
Query: 1635 ENVGSSFLLLSP--VHLK-DGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAAN 1691
+N+ +++L +H+K D D + ++L P+ N++ L+ E +
Sbjct: 417 QNIKYDYIVLHNYGIHVKGDFFDTMVAHYLLQPEQYH----NMDYLANVYLNYEPVSIEK 472
Query: 1692 RSG-RWKNQ--MRRAAHNGCCRRVAQ----TRALCSVLWKLLVSEELIEALLNIEIPLVN 1744
G + K Q MR+ C A+ T L + L K L +E++ + +IE+PL
Sbjct: 473 LIGPKGKKQLSMRQVPVEQVCEYAAEDADVTLQLKNRLEKELKTEKMEKLFYDIEMPLTK 532
Query: 1745 VLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLK 1804
VLADME+ G+ VD+ + ++L +++ LE++ + LAG+ F++ +A + VL+ LK
Sbjct: 533 VLADMEITGVNVDITELKSSSDILTRRMNELEQEIFQLAGVTFNVSSARQVGEVLFERLK 592
Query: 1805 LPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMS 1864
+ K Q+ ST + L+ LR HPIV I + R + KLL+ + ++ L I+
Sbjct: 593 IDEKAKKTKTGQY-STTEEILEKLRSRHPIVGKILDQRGIRKLLSTYINALPEL--INPK 649
Query: 1865 TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDF 1924
T K +H + QT T+TGRLS PNLQ + D+ R
Sbjct: 650 TGK--IHTSFNQTITSTGRLSSSNPNLQNIPIR-----------------DNEGREIRRA 690
Query: 1925 FIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVG 1984
F+P + + + +ADYSQIELR+MAH S D +I + D+ AA+ D+V
Sbjct: 691 FVPDK-DCVFFSADYSQIELRIMAHLSGDRHMIEAF-REGSDIHAATAAKIYKVPIDAVT 748
Query: 1985 SQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCH 2044
+ R + K +GI+YG+ L+E+LN +EAK I + S+P + +++ ++
Sbjct: 749 ADMRRKAKTANFGIIYGISVFGLAERLNIPRSEAKILIDGYFESYPQIKEYMNKSIEVAR 808
Query: 2045 QKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGG 2104
+KGYVE++ GRKR L I N+ + A+R A+N+ QGSAADIIKIAMI I
Sbjct: 809 EKGYVETICGRKRMLPDIHSHNSVVRGYAERNAINAPIQGSAADIIKIAMIRI------- 861
Query: 2105 VYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLL 2164
A + R R++LQVHDEL V I+ ++V + ME+A L VPLL
Sbjct: 862 --------AKRLENEHLRSRMILQVHDELNFNVPVEEIERVKAIVCEEMENAYPLQVPLL 913
Query: 2165 VKIQVGSTW 2173
VG W
Sbjct: 914 ADSGVGHNW 922
>gi|124262437|gb|ABM97416.1| DNA polymerase I [Bacillus sp. G(2006)]
Length = 876
Score = 239 bits (611), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 238/466 (51%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 447 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEE 506
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++LR +E++ Y LAG +F++ + + +L+ L+LPI K K ST L+
Sbjct: 507 LAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPI---LKKTKTGYSTSADVLEK 563
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 564 LAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSST 619
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 620 EPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRVL 662
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D L+ + D+ T A SED V R Q K + +GI+YG+ L
Sbjct: 663 AHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGL 721
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 722 AQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNF 781
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLLL
Sbjct: 782 NVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLLL 826
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE ++ LV + ME A L VPL V G TW
Sbjct: 827 QVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGPTW 872
>gi|416913|sp|Q04957.1|DPO1_BACCA RecName: Full=DNA polymerase I; Short=POL I
gi|912445|dbj|BAA02361.1| DNA polymerase [Bacillus caldotenax]
Length = 877
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 240/467 (51%), Gaps = 41/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 447 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEE 506
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++LR +E++ Y LAG +F++ + + +L+ L+LP+ K K ST L+
Sbjct: 507 LAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV---LKKSKTGYSTSADVLEK 563
Query: 1828 LRHEHPIVPVIKEH-RTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L H IV I +H R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 564 LAPYHEIVENILQHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSS 619
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR+
Sbjct: 620 TEPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRV 662
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
+AH ++D L+ + D+ T A SED V R Q K + +GI+YG+
Sbjct: 663 LAHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYG 721
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
L++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 722 LAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRN 781
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLL
Sbjct: 782 FNVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLL 826
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LQVHDEL+LE ++ LV + ME A L VPL V GSTW
Sbjct: 827 LQVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTW 873
>gi|419801955|ref|ZP_14327158.1| DNA-directed DNA polymerase [Haemophilus parainfluenzae HK262]
gi|385192322|gb|EIF39728.1| DNA-directed DNA polymerase [Haemophilus parainfluenzae HK262]
Length = 932
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/555 (30%), Positives = 273/555 (49%), Gaps = 59/555 (10%)
Query: 1633 GLENVGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSE 1685
++ VG +F + ++GID+ + S++L + N++ K+ L +
Sbjct: 419 AIQKVGQNFKYDLTIFARNGIDVQGVAFDTMLESYVL----NSTGRHNMDDLAKRYLGHQ 474
Query: 1686 AAAAANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLN-I 1738
+G+ KNQ+ A T L VLW+ L E +E L +
Sbjct: 475 TITFEEIAGKGKNQLTFNQIPLEKAAEYAAEDADVTMKLQQVLWEKLSKEPTLEKLFKEM 534
Query: 1739 EIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANV 1798
E+PL+ VL+ ME G+ +D + N + +L LE++AY LAG F+L + + +
Sbjct: 535 ELPLLGVLSRMERRGVLIDSDALFLQSNEIANRLSELEEQAYVLAGQPFNLASTKQLQEI 594
Query: 1799 LYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSL 1858
L+ L LP+ + KG PST++ L+ L H + V+ EHR L+KL + + +
Sbjct: 595 LFDKLGLPVIQKTPKGA--PSTNEEVLEELAFSHELPKVLVEHRGLSKLKSTYTDKLPQM 652
Query: 1859 ARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCK 1918
++ Q +H + Q TATGRLS +PNLQ + + NE+
Sbjct: 653 ----VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNEE-----------G 691
Query: 1919 INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGR 1978
R FI ++E + ++AADYSQIELR+MAH S+D LI ++ D+ AA G
Sbjct: 692 RRIRQAFI-AREGFTVVAADYSQIELRIMAHLSQDQGLINAFTQGK-DIHRSTAAEIFGV 749
Query: 1979 SEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHV 2038
+ D V S++R K + +G++YGM LS QL +A+ + + +P V +++H
Sbjct: 750 ALDEVTSEQRRNAKAINFGLIYGMSAFGLSRQLGIGRADAQSYMDLYFKRYPDVQTFMHD 809
Query: 2039 AVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIH 2098
+GYVE+L GR+ +L I N + A+R A+N+ QG+AADIIK AMI +
Sbjct: 810 IREKAKAQGYVETLFGRRLYLPDINSSNGMRRKAAERVAINAPMQGTAADIIKRAMIQLD 869
Query: 2099 SIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAAL 2158
+ PD +++QVHDELV EV ++ L++ MESAA
Sbjct: 870 QKLQN---DPD-------------IAMIMQVHDELVFEVRSEKVEFYSKLIKTHMESAAD 913
Query: 2159 LLVPLLVKIQVGSTW 2173
L+VPL+V + G+ W
Sbjct: 914 LVVPLIVDVGQGTNW 928
>gi|366166785|ref|ZP_09466540.1| DNA polymerase I [Acetivibrio cellulolyticus CD2]
Length = 897
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 239/436 (54%), Gaps = 40/436 (9%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PLV VLADME +G +++ L +K+ L K Y LAG +F++ + +
Sbjct: 498 IELPLVRVLADMEFYGFKININELTVISRQLDEKINQLTLKIYELAGEEFNINSPKQLGV 557
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
VL+ L+LPI + K K STD L+ L +H IV I E+R L KL + + +
Sbjct: 558 VLFEKLELPIIK---KTKTGYSTDAEVLEELAEKHEIVSNILEYRQLVKLKSTYIEGL-- 612
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+A I+ T K +H + QT T TGR+S EPNLQ + ++ +M
Sbjct: 613 MAVINPHTGK--IHSSFNQTVTVTGRISSTEPNLQNIP--IKLEMGR------------- 655
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
N R F+P N+ L+ ADYSQIELR++AH + D +IG + + D+ T A++ G
Sbjct: 656 --NIRKAFVPCDGNYKLVDADYSQIELRVLAHITDDENMIGAFNN-NEDIHTSTASKVFG 712
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
+ V S R + K + +GI+YG+G +LS+ L + EA+ I + + V ++H
Sbjct: 713 VPNEEVTSALRSKAKAVNFGIVYGIGDFSLSKDLGITRKEARNYIDGYLDKYANVRKYMH 772
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
V+ + G+V ++ R+R+L ++K N +S +R A+N+ QGSAADIIKIAM+ +
Sbjct: 773 DIVAQGKEFGFVTTMFNRRRYLPELKASNFNVRSFGERIAMNTPIQGSAADIIKIAMVMV 832
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA 2157
HS N + LK RL+LQVHDEL++E S ++E ++++ ME+A
Sbjct: 833 HS-------------ELNRRQLK--SRLILQVHDELIIEAHESELEEVTMILKESMENAT 877
Query: 2158 LLLVPLLVKIQVGSTW 2173
L VPL V ++ G++W
Sbjct: 878 ALKVPLSVDVKSGNSW 893
>gi|218899740|ref|YP_002448151.1| DNA polymerase I [Bacillus cereus G9842]
gi|423560905|ref|ZP_17537181.1| DNA polymerase I [Bacillus cereus MSX-A1]
gi|434377740|ref|YP_006612384.1| DNA polymerase I [Bacillus thuringiensis HD-789]
gi|218542969|gb|ACK95363.1| DNA polymerase I [Bacillus cereus G9842]
gi|401202750|gb|EJR09600.1| DNA polymerase I [Bacillus cereus MSX-A1]
gi|401876297|gb|AFQ28464.1| DNA polymerase I [Bacillus thuringiensis HD-789]
Length = 877
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|418522210|ref|ZP_13088248.1| DNA polymerase I [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410701574|gb|EKQ60095.1| DNA polymerase I [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
Length = 934
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 235/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L SE +E + +IE+PLV+VLA +E G+GVD + L K++
Sbjct: 511 TLRLHRVLGPRLTSEPGLERVYRDIEMPLVDVLARIEANGVGVDAAELRRQSADLSKRML 570
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 571 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 628
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 629 LPRVILEYRGLTKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 684
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P L+A DYSQIELR+MAH S D
Sbjct: 685 IPIRTE---------------DGRRIR-RAFVAPPGRK--LIACDYSQIELRIMAHLSGD 726
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G DV AA GR+ D+V + ER K + +G++YGM L+ QL
Sbjct: 727 PGLVGAFES-GADVHRATAAEVFGRTIDTVSADERRAAKAINFGLMYGMSAFGLARQLGI 785
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 786 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 845
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+ + D +A + Q R +++LQVHDEL
Sbjct: 846 ERAAINAPMQGTAADIIKRAMVKV-----------DGWIADHAQ----RAKMILQVHDEL 890
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M AA L VPL+V VG W
Sbjct: 891 VFEADIDFVDTLLSEVTTRMAGAAELRVPLVVDSGVGDNW 930
>gi|345100602|pdb|2XY7|A Chain A, Crystal Structure Of A Salicylic Aldehyde Base In The
Pre-Insertion Site Of Fragment Dna Polymerase I From
Bacillus Stearothermophilus
Length = 580
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 239/466 (51%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 151 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEE 210
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++LR +E++ Y LAG +F++ + + +L+ L+LP+ K K ST L+
Sbjct: 211 LAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV---LKKSKTGYSTSADVLEK 267
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 268 LAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSST 323
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 324 EPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRVL 366
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D L+ + D+ T A SED V R Q K + +GI+YG+ L
Sbjct: 367 AHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGL 425
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 426 AQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNF 485
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLLL
Sbjct: 486 NVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLLL 530
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE ++ LV + ME A L VPL V GSTW
Sbjct: 531 QVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTW 576
>gi|228960856|ref|ZP_04122489.1| DNA polymerase I [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228798752|gb|EEM45732.1| DNA polymerase I [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 891
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 253/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLCNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|345100596|pdb|2XY5|A Chain A, Crystal Structure Of An Artificial Salen-Copper Basepair In
Complex With Fragment Dna Polymerase I From Bacillus
Stearothermophilus
Length = 581
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 239/466 (51%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 152 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEE 211
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++LR +E++ Y LAG +F++ + + +L+ L+LP+ K K ST L+
Sbjct: 212 LAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV---LKKSKTGYSTSADVLEK 268
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 269 LAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSST 324
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 325 EPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRVL 367
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D L+ + D+ T A SED V R Q K + +GI+YG+ L
Sbjct: 368 AHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGL 426
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 427 AQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNF 486
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLLL
Sbjct: 487 NVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLLL 531
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE ++ LV + ME A L VPL V GSTW
Sbjct: 532 QVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTW 577
>gi|403379791|ref|ZP_10921848.1| DNA polymerase I (POL I) [Paenibacillus sp. JC66]
Length = 883
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 169/471 (35%), Positives = 247/471 (52%), Gaps = 42/471 (8%)
Query: 1703 AAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCL 1762
A H G R+ A L L KLL S ++ ++E+PL +VLA ME G+ V+ +
Sbjct: 451 AKHLG--RKAAYVAKLSPELDKLLDSNDMKSLFHDLELPLSHVLAGMEEQGVKVNADELK 508
Query: 1763 QARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDK 1822
+ L +++ L K+ + LAG +F+L + + VL+ L LP+ + K K STD
Sbjct: 509 RLGKELSERIDELVKQIHELAGGEFNLNSPKQLGEVLFDRLGLPVIK---KTKTGYSTDA 565
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATG 1882
L+ L H IV + +R LAKL + + + L + T K +H ++ QT ATG
Sbjct: 566 EVLEKLAPRHEIVRHLLIYRQLAKLQSTYIEGL--LKEVREETGK--IHTYYKQTIAATG 621
Query: 1883 RLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQI 1942
RLS + PNLQ + +E + KI R F+PS+E W +LAADYSQI
Sbjct: 622 RLSSQYPNLQNIPIRLE---------------EGRKI--RKAFVPSEEGWYILAADYSQI 664
Query: 1943 ELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGM 2002
ELR++AH S+D L+ K D+ T A G +ED V + R K + +GI+YG+
Sbjct: 665 ELRVLAHISQDEKLMEAFFKEM-DIHTKTAMDVFGVAEDEVDANMRRSAKAVNFGIVYGI 723
Query: 2003 GPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKI 2062
LS+ L+ + EA + I+ + + F GV ++ VSS GYV +L R+R+L +I
Sbjct: 724 SDYGLSQNLDITRGEAAKFIEQYFAVFQGVRKYMEDIVSSARTDGYVTTLLHRRRYLPEI 783
Query: 2063 KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR 2122
K N +S A+R A+N+ QG+AADIIK+AM+ + A + K R
Sbjct: 784 KASNYNLRSFAERTAMNTPIQGTAADIIKLAMVQV---------------AERLKEEKRR 828
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
R+LLQVHDELV EV ++E LV ME+A L VPL + GS W
Sbjct: 829 SRMLLQVHDELVFEVPAEELEEMKVLVPDVMENALDLSVPLKADVSFGSNW 879
>gi|228910411|ref|ZP_04074226.1| DNA polymerase I [Bacillus thuringiensis IBL 200]
gi|228849177|gb|EEM94016.1| DNA polymerase I [Bacillus thuringiensis IBL 200]
Length = 891
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|75762014|ref|ZP_00741928.1| DNA polymerase I [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228903104|ref|ZP_04067240.1| DNA polymerase I [Bacillus thuringiensis IBL 4222]
gi|74490500|gb|EAO53802.1| DNA polymerase I [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228856513|gb|EEN01037.1| DNA polymerase I [Bacillus thuringiensis IBL 4222]
Length = 891
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|229844734|ref|ZP_04464873.1| DNA polymerase I [Haemophilus influenzae 6P18H1]
gi|229812448|gb|EEP48138.1| DNA polymerase I [Haemophilus influenzae 6P18H1]
Length = 930
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 268/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ + A
Sbjct: 444 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLQQATE 499
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 500 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFMQS 559
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 560 NEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 617
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 618 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 673
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 674 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 715
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 716 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 774
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ + +GYVE+L GR+ +L I
Sbjct: 775 GLSRQLGISRPDAQKYMDLYFQRYPSVQQFMTDIRAKAKAQGYVETLFGRRLYLPDINSS 834
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + +I + P+ +
Sbjct: 835 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEVI---RHDPN-------------IEM 878
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ +E+AA L+VPL+V++ VG W
Sbjct: 879 IMQVHDELVFEVRSEKVAFFREQIKQHIEAAAELVVPLIVEVGVGQNW 926
>gi|196047493|ref|ZP_03114704.1| DNA polymerase I [Bacillus cereus 03BB108]
gi|225866564|ref|YP_002751942.1| DNA polymerase I [Bacillus cereus 03BB102]
gi|376268515|ref|YP_005121227.1| DNA polymerase I [Bacillus cereus F837/76]
gi|196021708|gb|EDX60404.1| DNA polymerase I [Bacillus cereus 03BB108]
gi|225785727|gb|ACO25944.1| DNA-directed DNA polymerase [Bacillus cereus 03BB102]
gi|364514315|gb|AEW57714.1| DNA polymerase I [Bacillus cereus F837/76]
Length = 877
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 269/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ K D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAF-KHDMDIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|78049756|ref|YP_365931.1| DNA polymerase I [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|78038186|emb|CAJ25931.1| DNA-directed DNA polymerase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 933
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 236/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L SE +E + +IE+PLV+VLA +E G+ VD + L K++
Sbjct: 510 TLRLHRVLGPRLASEPDLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 569
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 570 AAQQKATELAGRSFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 627
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R LAKL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 628 LPRVILEYRGLAKLRSTYTDKLPEM----VHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 683
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P+ L+A DYSQIELR+MAH S D
Sbjct: 684 IPIRTE---------------DGRRIR-RAFVAPAGRK--LIACDYSQIELRIMAHLSGD 725
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G DV AA GR+ D+V ER K + +G++YGM L+ QL
Sbjct: 726 PGLVGAFES-GADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGI 784
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 785 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 844
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+N+ D +A + Q R +++LQVHDEL
Sbjct: 845 ERAAINAPMQGTAADIIKRAMVNV-----------DGWIANHAQ----RAKMILQVHDEL 889
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M AA L VPL+V VG W
Sbjct: 890 VFEADIDFVDTLLSEVTTRMAGAAELRVPLVVDSGVGDNW 929
>gi|229152782|ref|ZP_04280965.1| DNA polymerase I [Bacillus cereus m1550]
gi|228630602|gb|EEK87248.1| DNA polymerase I [Bacillus cereus m1550]
Length = 891
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|268316907|ref|YP_003290626.1| DNA polymerase I [Rhodothermus marinus DSM 4252]
gi|262334441|gb|ACY48238.1| DNA polymerase I [Rhodothermus marinus DSM 4252]
Length = 924
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 199/663 (30%), Positives = 302/663 (45%), Gaps = 107/663 (16%)
Query: 1518 DKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEH 1577
D + + + + G+A WE YYV P L G+ + VL
Sbjct: 358 DTETTSTEAMWASLVGIAFSWEKGQGYYVPTP-------------LPDGTPTETVL---- 400
Query: 1578 QLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENV 1637
+R+ I+ +R RK N+K + VL V +
Sbjct: 401 ---------ERLAPIL-RRAQRKVGQNLKYDLVVLAQHGVEV------------------ 432
Query: 1638 GSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGR 1695
P + D + +++ P++ NL+ ++ L + A SGR
Sbjct: 433 -------PPPYF----DTMVAHYLIAPEEPH----NLDVLARQYLRYQMVAITELIGSGR 477
Query: 1696 WKNQMRRAAHNG----CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMEL 1751
+ MR + + C L VL L L +E PL+ VLADME
Sbjct: 478 DQKSMRDVSIDEVGPYACEDTDIALQLADVLAAELDRHGLRHIAEEMEFPLIEVLADMER 537
Query: 1752 WGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGH 1811
GI +D + L+ +L LE K Y +AG++F++ + +A+VL+ L L
Sbjct: 538 TGICIDRTVLREIGKQLEAELHELEAKIYEVAGVEFNIGSPQQLADVLFKKLGLKPRART 597
Query: 1812 NKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLH 1871
+ G+ PST + L L +HP+ +I + R LAKL + + + L + + +H
Sbjct: 598 STGR--PSTKESVLQELATQHPLPGLILDWRHLAKLKSTYVDGLEPL----IHPETGRIH 651
Query: 1872 GHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQEN 1931
+ QT TATGRLS PNLQ + V +M E R F+P +
Sbjct: 652 TTFNQTVTATGRLSSSNPNLQNIP--VRTEMGRE---------------IRRAFVP-RPG 693
Query: 1932 WILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQT 1991
W LL+ADY QIELR++A S D AL + D+ T AAR + V ++R +
Sbjct: 694 WKLLSADYVQIELRILAALSGDEALRRAFLEGQ-DIHTATAARVFKVPPEQVTPEQRRRA 752
Query: 1992 KRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVES 2051
K + YGI YG+ L+++L CS+ EA+E I+ ++ +FPGV +LH V QKGYVE+
Sbjct: 753 KMVNYGIPYGISAWGLAQRLRCSTREAQELIEEYQRAFPGVTRYLHRVVEEARQKGYVET 812
Query: 2052 LKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSS 2111
L GR+R++ I N E+S A+R AVN QG+ AD+IK+AM++I+
Sbjct: 813 LLGRRRYVPNINSRNRAERSMAERIAVNMPIQGTQADMIKLAMVHIYH------------ 860
Query: 2112 LAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLL-VPLLVKIQVG 2170
Q R ++LLQVHDELV E+ P ++ LV++ M+ A L VP+ V I VG
Sbjct: 861 ---RLQREGYRAKMLLQVHDELVFEMPPEEVEPVRQLVEQEMKQALPLEGVPIEVDIGVG 917
Query: 2171 STW 2173
W
Sbjct: 918 DNW 920
>gi|83814085|ref|YP_445755.1| DNA polymerase I [Salinibacter ruber DSM 13855]
gi|83755479|gb|ABC43592.1| DNA polymerase I [Salinibacter ruber DSM 13855]
Length = 926
Score = 239 bits (611), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 276/585 (47%), Gaps = 80/585 (13%)
Query: 1596 RDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDM 1655
RD K N+K + +LK V VG +L D
Sbjct: 411 RDTEKLGHNLKYDLLLLKQHGVE---------VGGTL--------------------FDT 441
Query: 1656 CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRW--KNQMRR----AAHNGCC 1709
+ +++ P++ N NL+ + L+ + A+ G ++ MR A C
Sbjct: 442 MVAHYLVAPEE----NHNLDDVARSVLNYKMVPIADLIGDETDRDSMREVEVETAAPYAC 497
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
+ L L L +++ +IE PLV+VLA ME GI +D + + L+
Sbjct: 498 EDADISYRLADELEAQLEDGNVLDVAHDIEFPLVHVLATMEHTGIRLDTDVLDEILAGLE 557
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
++L +E++ + LAG +F++ + + +L+ L LP+ GK PST + L L
Sbjct: 558 ERLSGIEEEVFELAGEEFNINSTQQLGEILFEKLDLPVVSKTPTGK--PSTKESVLQELS 615
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
EH I ++ + R+ KL + L S+ L + + LH + QT TATGRLS +P
Sbjct: 616 TEHEIPGLVLDWRSTYKLKSTYLDSLGEL----VHPETGRLHTSFNQTRTATGRLSSSDP 671
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + E R F+P ++ W LL+ADY+QIELR++A
Sbjct: 672 NLQNIPIRTEMGR-----------------QIRRAFVP-KDGWALLSADYAQIELRILAA 713
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
S D A+ + GD+ T AAR G + V ++R + K + YGI YG+ P L++
Sbjct: 714 MSGDDAMRATFQE-GGDIHTDAAARVYGIDPEDVTPEQRSKAKEVNYGIPYGISPWGLAQ 772
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
++ +EA++ IK ++ S+PGV+ L+ V KGY E+L GR+R+L I N+
Sbjct: 773 RMRMPVDEAQDIIKQYRKSYPGVSQLLNELVEKAQDKGYAETLLGRRRYLPDIDSSNSNA 832
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S A+R AVN QG+ AD+IKIAM IH + G + ++LLQV
Sbjct: 833 RSAAERVAVNMPIQGTQADMIKIAMNRIHDRLAGDDWA---------------TQMLLQV 877
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESA-ALLLVPLLVKIQVGSTW 2173
HDELV EV P + A +++ M A L VP+ V + G W
Sbjct: 878 HDELVFEVPPDELDAAQTMIDDEMRDALPLDDVPVTVDMDTGDNW 922
>gi|118479734|ref|YP_896885.1| DNA polymerase I [Bacillus thuringiensis str. Al Hakam]
gi|229186842|ref|ZP_04313997.1| DNA polymerase I [Bacillus cereus BGSC 6E1]
gi|118418959|gb|ABK87378.1| DNA polymerase I [Bacillus thuringiensis str. Al Hakam]
gi|228596579|gb|EEK54244.1| DNA polymerase I [Bacillus cereus BGSC 6E1]
Length = 891
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 269/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ K D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVEAF-KHDMDIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|145632225|ref|ZP_01787960.1| DNA polymerase I [Haemophilus influenzae 3655]
gi|145634721|ref|ZP_01790429.1| DNA polymerase I [Haemophilus influenzae PittAA]
gi|144987132|gb|EDJ93662.1| DNA polymerase I [Haemophilus influenzae 3655]
gi|145267887|gb|EDK07883.1| DNA polymerase I [Haemophilus influenzae PittAA]
Length = 935
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 268/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ + A
Sbjct: 449 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLQQATE 504
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D +
Sbjct: 505 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSDALFMQS 564
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LEK+AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 565 NEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 622
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 623 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 678
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 679 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 720
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V S++R K + +G++YGM
Sbjct: 721 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAF 779
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ + +GYVE+L GR+ +L I
Sbjct: 780 GLSRQLGISRPDAQKYMDLYFQRYPSVQQFMTDIRAKAKAQGYVETLFGRRLYLPDINSS 839
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + +I + P+ +
Sbjct: 840 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEVI---RHDPN-------------IEM 883
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ +E+AA L+VPL+V++ VG W
Sbjct: 884 IMQVHDELVFEVRSEKVAFFREQIKQHIEAAAELVVPLIVEVGVGQNW 931
>gi|218232627|ref|YP_002369383.1| DNA polymerase I [Bacillus cereus B4264]
gi|218160584|gb|ACK60576.1| DNA-directed DNA polymerase [Bacillus cereus B4264]
Length = 877
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|390566441|ref|ZP_10246823.1| DNA polymerase I (fragment) [Nitrolancetus hollandicus Lb]
gi|390170305|emb|CCF86172.1| DNA polymerase I (fragment) [Nitrolancetus hollandicus Lb]
Length = 492
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 229/477 (48%), Gaps = 33/477 (6%)
Query: 1703 AAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCL 1762
AA C V T L +L K L + L IE+PLV+VL D+E GI VD+
Sbjct: 49 AAAPYACADVEATYRLVEILRKELKDQGLDTLFHEIEMPLVDVLVDIEEAGIAVDVAFLR 108
Query: 1763 QARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDK 1822
L ++ LE + + A F++ + +A +L+ L LP + K S +
Sbjct: 109 DLEAYLDTQISALEHEIFQQAKRPFNINSTRQLATILFEELGLP---SGRRTKTGYSVSQ 165
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATG 1882
L+ LR EHPIV I E+R L KL + +G++ +I+ +T + +H + QT ATG
Sbjct: 166 DVLEGLREEHPIVNAILEYRQLLKLKSTYVGALPE--QINPATGR--IHSSFNQTVAATG 221
Query: 1883 RLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQI 1942
RLS PNLQ + E V I+ +P + LL+ADYSQI
Sbjct: 222 RLSSSNPNLQNIPIRTEI----------GRRVRRAFISDNREQVPDGQELTLLSADYSQI 271
Query: 1943 ELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGM 2002
ELRLMAHFS D L+ + D+ AA G V + R K + +GI+YGM
Sbjct: 272 ELRLMAHFSGDARLVQAFHRGQ-DIHAATAAELFGIDIKDVTADMRRLAKTVNFGIMYGM 330
Query: 2003 GPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKI 2062
L+ S EA+ I ++ + PGV +L KGYV +L GR+R+ I
Sbjct: 331 QAFGLARDTGMSRQEAQRFIDTYMARLPGVWHYLDQTKREAIDKGYVSTLYGRRRYAPDI 390
Query: 2063 KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR 2122
N + A+R A+N QG+AADI+KIAMI + + R
Sbjct: 391 VSSNGSRRLAAERMAINMPLQGTAADIMKIAMIRVQD---------------ELRRRGLR 435
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
R+LLQVHDELV EV S +K+ LV ME+ LL VPL V++ G WG LEP
Sbjct: 436 TRMLLQVHDELVFEVPKSELKDIAELVTDIMENVVLLRVPLQVELAAGKNWGELEPI 492
>gi|426343661|ref|XP_004038410.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase nu [Gorilla gorilla
gorilla]
Length = 908
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 170/555 (30%), Positives = 286/555 (51%), Gaps = 56/555 (10%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNL-EKEVKKRLSSEAAAAANRSGRWKNQMRRAA 1704
H+ D G+D I +W++ P D S +L EK +K ++ + + S R N + +
Sbjct: 347 HVADFIGLDPRIAAWLIDPSDATPSFEDLVEKYCEKSITVKVNSTCGNSSR--NIVNQNV 404
Query: 1705 HNGCCRRVAQTRALCSVL-----WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
T LCS L W+L + +E+PL+ +LA ME I V+ E
Sbjct: 405 RENLKILYRLTMDLCSKLKDYGLWQLFCT---------LELPLIPILAVMESHAIQVNKE 455
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKG----- 1814
+ LL +L+ LE++A+ +AG +F + + + +L+G LKL + N
Sbjct: 456 EMEKTSALLGARLKELEQEAHFVAGERFLIMSNNQLREILFGKLKLHLLSQRNSLPRTGL 515
Query: 1815 KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHW 1874
+++PST + L+ LR HP+ +I E+R + K+ + + + + + K ++ W
Sbjct: 516 QKYPSTSEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMK------KGSISSVW 569
Query: 1875 LQTSTATGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWI 1933
QT T TGRLS + PN+Q + +H ++ ++ + GN+ + + F +
Sbjct: 570 NQTGTVTGRLSAKHPNIQGISKHPIQ--ITTPKNFKGNSFLTTLLKSLVTLFXDG-VSLX 626
Query: 1934 LLAADYSQIELRLMAHFSKDPALIGLLSKP-HGDVFTMIAARWTGRSEDSVGSQERDQTK 1992
L D+SQIELR++AH S DP L+ L + DVF+ + ++W + V +R+QTK
Sbjct: 627 LYLTDFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKNVPVEQVTHADREQTK 686
Query: 1993 RLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESL 2052
+++Y ++YG G L+ L EA + ++SF + + + A++ CHQ G V S+
Sbjct: 687 KVVYAVVYGAGKERLAACLGVPVQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSI 746
Query: 2053 KGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSL 2112
GR+R L +I + + +++A+RQAVN + QGSAAD+ K+AMI++ + + +L
Sbjct: 747 MGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAAS-----HTL 801
Query: 2113 AANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES----AAL---LLVPLLV 2165
A RL+ Q+HDEL+ EV+ I E +LV++ MES AL L VPL V
Sbjct: 802 TA---------RLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKV 852
Query: 2166 KIQVGSTWGSLEPFQ 2180
+ G +WG L P Q
Sbjct: 853 SLSAGRSWGHLVPLQ 867
>gi|383783480|ref|YP_005468046.1| DNA polymerase I [Leptospirillum ferrooxidans C2-3]
gi|383082389|dbj|BAM05916.1| putative DNA polymerase I [Leptospirillum ferrooxidans C2-3]
Length = 868
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 246/470 (52%), Gaps = 48/470 (10%)
Query: 1713 AQTRALCSVLWKLLVSE----ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
+ R L S L+ LL E L+ LL IE+PL VL+ ME +G+ +D + R+LL
Sbjct: 442 GERRELVSSLYPLLYEEISRFHLLPVLLKIEVPLSGVLSRMERFGVSIDKKQLEALRHLL 501
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
+L LEK+ + LAG F + + +A +L+ L LP KGK STD+ L+ L
Sbjct: 502 SGRLSALEKEVHELAGESFLILSPKQVARILFEKLALPT---ARKGKTGYSTDEETLESL 558
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
R +HP+ +I E+R L+KLL+ + I S + LHG + QT TATGRLS +
Sbjct: 559 REKHPLPGMILEYRQLSKLLSTYVEGISS-----KMDENGRLHGQFHQTVTATGRLSSSD 613
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + E + E+ C F P +LL+ADYSQIELRL+A
Sbjct: 614 PNLQNIPIRSELGL----------EIRKC------FVAPPGS--LLLSADYSQIELRLLA 655
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H S D +L+ ++ D+ + A R G + V R + K + +GILYGM +LS
Sbjct: 656 HMSGDASLVEAFTQGE-DIHSNTARRLFG---EPVTPDSRRRAKTVNFGILYGMSSYSLS 711
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
+ L +++E+KE I + +++PG+ + + + G V ++ GR R + ++ + +
Sbjct: 712 QSLGVTASESKEVIDRYFATYPGIEPFFSSILDEARKTGMVRTISGRIRRIPEVHSSDRR 771
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+ +R AVN++ QGSAAD+IK +M+ + + PD KG LL+Q
Sbjct: 772 LREYGERMAVNTVLQGSAADLIKKSMVELSGRLDA---IPD----------KG-ANLLIQ 817
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEP 2178
VHDEL+LEV S ++E L++ ME A L VPL+V G W P
Sbjct: 818 VHDELLLEVPSSRVEEMSVLLKDVMEKAFDLKVPLVVSTGWGKNWVDAHP 867
>gi|417782453|ref|ZP_12430183.1| DNA-directed DNA polymerase [Leptospira weilii str. 2006001853]
gi|410777394|gb|EKR62042.1| DNA-directed DNA polymerase [Leptospira weilii str. 2006001853]
Length = 919
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 173/557 (31%), Positives = 283/557 (50%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G +L+ + D + S+++ P+ R N++ K L+
Sbjct: 410 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVIQPEGRRH---NMDALAKDLLN 459
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ + +G+ K ++ A+ + L+++ + E +E +L N
Sbjct: 460 YDTITYDDLVGTGKKKKELTDIDPEQVAEYAAEDADITFRLYQIFRKKIKESGVEPILRN 519
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 520 IEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGRSFNIASTKELQK 579
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL I + G STD L+ L EHPIV + ++R KL + + ++
Sbjct: 580 ILFDDLKLKIVKKTQTGY---STDHEVLEELLGEHPIVEKLLDYRKYTKLKSTYVDALPK 636
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D G
Sbjct: 637 M----VNPRTGRIHTSYNQTIAATGRLSSTDPNLQNI--------PIRDREG-------- 676
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
++ + F + S E + +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 677 RLLRKGFTVDSDE-YEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHIRTAAALY 733
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 734 GVPEKEVTPEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 793
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R + I + K A+R A+NS QG++AD+IKIAMIN
Sbjct: 794 ESMVEFAEKNGYVQTLTGRRRPIIDINSTHKSAKEAAKRIAINSPVQGTSADMIKIAMIN 853
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I Y R R+LLQVHDELV EV +E + ++K ME+A
Sbjct: 854 IHEDIEKKHY---------------RSRMLLQVHDELVFEVHKKEKEEFKTSMKKHMENA 898
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P+LV+ + G W
Sbjct: 899 MPLDLPILVEGKFGVNW 915
>gi|423573733|ref|ZP_17549852.1| DNA polymerase I [Bacillus cereus MSX-D12]
gi|401213832|gb|EJR20569.1| DNA polymerase I [Bacillus cereus MSX-D12]
Length = 877
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDVQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVDAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|326204649|ref|ZP_08194505.1| DNA polymerase I [Clostridium papyrosolvens DSM 2782]
gi|325985216|gb|EGD46056.1| DNA polymerase I [Clostridium papyrosolvens DSM 2782]
Length = 896
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 175/584 (29%), Positives = 285/584 (48%), Gaps = 71/584 (12%)
Query: 1591 EIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLK 1650
EI E +D+ K+ ++K + LK + LENV
Sbjct: 379 EIFESKDIEKYGHDLKNLYKYLKSHGIE---------------LENVI------------ 411
Query: 1651 DGIDMCIVSWILWPDDERSSNPNL-EKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCC 1709
D I ++IL P + L E ++K+ ++ R + + ++ C
Sbjct: 412 --FDTFIAAYILEPTRSTYTISELYEDKLKQSITPVEILYDKHGKRLQQEQDISSSEVCA 469
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
V L L ++ E IE+PLV VLADMEL G VD+EG +
Sbjct: 470 AAVNAIYVLIQKLRPIIRDNGQDELYYEIELPLVEVLADMELRGFKVDVEGLQAYSKEMD 529
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
+L LE + Y AG F++ + + +L+ L LP+ + K K ST+ L+ L
Sbjct: 530 SRLVILENEIYMQAGETFNINSPKQLGVILFEKLGLPVGK---KTKTGYSTNAEVLEQLS 586
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
++H IV I E+R L KL S + +S+ Q +H ++ QT TATGR+S EP
Sbjct: 587 YKHEIVERILEYRQLMKL-----KSTYADGLLSVLEQDGKIHSNFNQTVTATGRISSTEP 641
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + V+ +M + R FIP+ ++++LL ADYSQIELR++AH
Sbjct: 642 NLQNIP--VKLEMGRK---------------IRKVFIPTNQDYVLLDADYSQIELRVLAH 684
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
+ D +I K + D+ T A++ G + V S R + K + +GI+YG+G +LS+
Sbjct: 685 ITDDSNMIEAFLK-NEDIHTTTASKVFGIPPEEVSSLMRSRAKAVNFGIVYGIGDFSLSK 743
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
+ + EA++ I + + V ++ V + G+V +L R+R+L ++K N
Sbjct: 744 DIGVTKKEARQYIDDYLDKYSKVKEYMSDTVEKGKEFGFVTTLYNRRRYLPELKSSNFNM 803
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S +R A+N+ QGSAADIIKI+M+ +++ + K + +L+LQV
Sbjct: 804 RSFGERVAMNTPIQGSAADIIKISMVKVYN---------------ELKKRKLKSKLILQV 848
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDEL++E + S ++E L++ CME+A L VPL V ++ G +W
Sbjct: 849 HDELIVETEKSELEEVSKLLKDCMENAVQLKVPLTVDVKHGDSW 892
>gi|222098048|ref|YP_002532105.1| DNA polymerase i [Bacillus cereus Q1]
gi|221242106|gb|ACM14816.1| DNA polymerase I [Bacillus cereus Q1]
Length = 891
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVDAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|340618331|ref|YP_004736784.1| DNA polymerase I [Zobellia galactanivorans]
gi|339733128|emb|CAZ96503.1| DNA polymerase I (POL I) [Zobellia galactanivorans]
Length = 943
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 232/437 (53%), Gaps = 38/437 (8%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IEIPL+ VLADMEL GI +D + L ++ LE+K Y AG +F++ + +
Sbjct: 541 DIEIPLLRVLADMELEGIKLDEKFLNSLSEDLNNDIKTLEQKIYQDAGEEFNIGSPKQLG 600
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L+ +KL K Q ST + L L +H I+ + E+R LAKL + + ++
Sbjct: 601 EILFSKMKLVDKPKKTKTGQF-STSEDVLSYLAKDHEIIRNVLEYRGLAKLKSTYVDALP 659
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
++ ST + +H ++QT ATGRLS PNLQ + E
Sbjct: 660 E--QVEPSTGR--IHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQ------------- 702
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R F+P EN+ILLAADYSQIELR++A S++ +I K D+ A++
Sbjct: 703 ----VRKAFVPRNENYILLAADYSQIELRIIAALSEETTMIEAF-KNGEDIHASTASKVF 757
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
+ V ++R K + +GI+YG+ LS Q + S +EAKE I ++ ++P + +++
Sbjct: 758 NVPIEEVTREQRSNAKTVNFGIIYGVSAFGLSNQTDLSRSEAKELIDTYYKTYPKLRNYM 817
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
+ + GYV+++ GR+R+L I N + A+R AVN+ QGSAADIIKIAMIN
Sbjct: 818 SEQIDFARENGYVQTVLGRRRYLKDINGSNQVVRGAAERNAVNAPIQGSAADIIKIAMIN 877
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH + G YK ++LLQVHDELV ++ + E SL++ ME+A
Sbjct: 878 IHRKLTEGNYK---------------SKMLLQVHDELVFDIFKPELDELKSLIKSEMENA 922
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L VPL V++ +G W
Sbjct: 923 YTLSVPLDVEVGIGQDW 939
>gi|145628242|ref|ZP_01784043.1| DNA polymerase I [Haemophilus influenzae 22.1-21]
gi|145638340|ref|ZP_01793950.1| DNA polymerase I [Haemophilus influenzae PittII]
gi|144980017|gb|EDJ89676.1| DNA polymerase I [Haemophilus influenzae 22.1-21]
gi|145272669|gb|EDK12576.1| DNA polymerase I [Haemophilus influenzae PittII]
gi|309751482|gb|ADO81466.1| DNA polymerase I [Haemophilus influenzae R2866]
Length = 935
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 265/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E A + +G+ K+Q+ A
Sbjct: 449 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIAFESIAGKGKSQLTFNQIPLEQATE 504
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L+E +E+PL++VL+ ME G+ +D
Sbjct: 505 YAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLIDSNALFMQS 564
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LE++AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 565 NEIATRLTALEEQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 622
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 623 EELSYSHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 678
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 679 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 720
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D + S++R K + +G++YGM
Sbjct: 721 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEITSEQRRNAKAINFGLIYGMSAF 779
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +P V ++ +GYVE+L GR+ +L I
Sbjct: 780 GLSRQLGISRADAQKYMDLYFQRYPSVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSS 839
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + +I + PD +
Sbjct: 840 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEVI---RHDPD-------------IEM 883
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 884 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAELVVPLIVEVGVGQNW 931
>gi|229141312|ref|ZP_04269850.1| DNA polymerase I [Bacillus cereus BDRD-ST26]
gi|228642093|gb|EEK98386.1| DNA polymerase I [Bacillus cereus BDRD-ST26]
Length = 891
Score = 239 bits (610), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVDAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|423395136|ref|ZP_17372337.1| DNA polymerase I [Bacillus cereus BAG2X1-1]
gi|423405996|ref|ZP_17383145.1| DNA polymerase I [Bacillus cereus BAG2X1-3]
gi|401655907|gb|EJS73435.1| DNA polymerase I [Bacillus cereus BAG2X1-1]
gi|401660665|gb|EJS78143.1| DNA polymerase I [Bacillus cereus BAG2X1-3]
Length = 877
Score = 239 bits (610), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 230/466 (49%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+V + + L E E +E+PL VLADME+ G+ VD E
Sbjct: 448 VARKVHVLYDVKQTFLEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRHMGEE 507
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L +L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD
Sbjct: 508 LAGRLKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDK 564
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H I+P I +R L KL + + + + S +H + Q T TGRLS
Sbjct: 565 LMDHHEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSST 620
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R F+PS+E WI+ AADYSQIELR++
Sbjct: 621 DPNLQNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVL 663
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH + D L+ D+ T A G +D V S R Q K + +GI+YG+ L
Sbjct: 664 AHIANDKGLVEAFQNDM-DIHTKTAMDVFGVGKDEVTSNMRRQAKAVNFGIVYGISDYGL 722
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S+ L + A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N
Sbjct: 723 SQNLGITRKAAGEFIEKYLESFPGVKEYMDDIVKDTKQKGYVATLLNRRRYIPEITSRNF 782
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI +A + + RLLL
Sbjct: 783 NLRSFAERTAMNTPIQGSAADIIKKAMI---------------VMADRLEEEGLQARLLL 827
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+ E I++ LV + ME A L VPL V G TW
Sbjct: 828 QVHDELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|206969813|ref|ZP_03230767.1| DNA polymerase I [Bacillus cereus AH1134]
gi|365158631|ref|ZP_09354823.1| DNA polymerase I [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411629|ref|ZP_17388749.1| DNA polymerase I [Bacillus cereus BAG3O-2]
gi|423432584|ref|ZP_17409588.1| DNA polymerase I [Bacillus cereus BAG4O-1]
gi|206735501|gb|EDZ52669.1| DNA polymerase I [Bacillus cereus AH1134]
gi|363626504|gb|EHL77487.1| DNA polymerase I [Bacillus sp. 7_6_55CFAA_CT2]
gi|401104954|gb|EJQ12922.1| DNA polymerase I [Bacillus cereus BAG3O-2]
gi|401115717|gb|EJQ23564.1| DNA polymerase I [Bacillus cereus BAG4O-1]
Length = 877
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPKLEVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|423373465|ref|ZP_17350804.1| DNA polymerase I [Bacillus cereus AND1407]
gi|401096429|gb|EJQ04476.1| DNA polymerase I [Bacillus cereus AND1407]
Length = 877
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVDAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|423426712|ref|ZP_17403743.1| DNA polymerase I [Bacillus cereus BAG3X2-2]
gi|423502738|ref|ZP_17479330.1| DNA polymerase I [Bacillus cereus HD73]
gi|449091540|ref|YP_007423981.1| DNA polymerase I [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|401110278|gb|EJQ18187.1| DNA polymerase I [Bacillus cereus BAG3X2-2]
gi|402459977|gb|EJV91705.1| DNA polymerase I [Bacillus cereus HD73]
gi|449025297|gb|AGE80460.1| DNA polymerase I [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 877
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPKLEVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVKKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|30022662|ref|NP_834293.1| DNA polymerase I [Bacillus cereus ATCC 14579]
gi|29898220|gb|AAP11494.1| DNA polymerase I [Bacillus cereus ATCC 14579]
Length = 891
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 253/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFCTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|423386080|ref|ZP_17363336.1| DNA polymerase I [Bacillus cereus BAG1X1-2]
gi|423527564|ref|ZP_17504009.1| DNA polymerase I [Bacillus cereus HuB1-1]
gi|401634731|gb|EJS52494.1| DNA polymerase I [Bacillus cereus BAG1X1-2]
gi|402452933|gb|EJV84743.1| DNA polymerase I [Bacillus cereus HuB1-1]
Length = 877
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 251/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDR 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|209360706|gb|ACI43005.1| DNA polymerase I [Geobacillus kaue]
Length = 878
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 263/545 (48%), Gaps = 60/545 (11%)
Query: 1633 GLENVGSSFLLLSPVHL----KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA 1688
G+E G +F LL +L +D D+ V+ + + R K K+ L E
Sbjct: 386 GIELRGVAFDLLLAAYLLNPAQDAGDVAAVAKMKQYEAVRPDEAVYGKGAKRSLPDEPTL 445
Query: 1689 AANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLAD 1748
A + R+ A AL L S E E L+ +E PL +LA+
Sbjct: 446 AEH----------------LVRKAAAIWALERPFLDELRSNEQDELLIKLEQPLATILAE 489
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIP 1808
ME G+ VD + Q + L ++L +E++ Y LAG +F++ + + +L+ L+LP+
Sbjct: 490 MEFTGVKVDTKRLEQMGSELAEQLGAIEQRIYELAGQEFNINSPKQLGIILFEKLQLPV- 548
Query: 1809 EGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKY 1868
K K ST L+ L H IV I +R L KL + + + + + T K
Sbjct: 549 --LKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYIEGLLKV--VHHDTGK- 603
Query: 1869 TLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+H + Q T TGRLS EPNLQ + +E + KI R F+PS
Sbjct: 604 -VHTMFNQALTQTGRLSSAEPNLQNIPIRLE---------------EGRKI--RQAFVPS 645
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
+ W++ AADYSQIELR++AH + D LI + D+ T A SE+ V + R
Sbjct: 646 EPGWLIFAADYSQIELRVLAHIADDDNLIEAFRR-DLDIHTKTAMDIFHVSEEEVTATMR 704
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K + +GI+YG+ L++ LN + EA E I+ + +SFPGV ++ V QKGY
Sbjct: 705 RQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKRYMETIVQEAKQKGY 764
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
V +L R+R+ I N +S A+R A+N+ QGSAADIIK AMI+
Sbjct: 765 VTTLLHRRRYFPDITSRNFNVRSFAERTAMNTPIQGSAADIIKKAMID------------ 812
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
LAA + + + RLLLQVHDEL+LE ++ LV + ME A L VPL V
Sbjct: 813 ---LAARLKEERLQARLLLQVHDELILEAPKEEMERLCQLVPEVMEQAVELRVPLKVDYH 869
Query: 2169 VGSTW 2173
G TW
Sbjct: 870 YGPTW 874
>gi|423438021|ref|ZP_17415002.1| DNA polymerase I [Bacillus cereus BAG4X12-1]
gi|401119634|gb|EJQ27445.1| DNA polymerase I [Bacillus cereus BAG4X12-1]
Length = 877
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPKLEVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVKKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|392956932|ref|ZP_10322457.1| DNA polymerase I [Bacillus macauensis ZFHKF-1]
gi|391876834|gb|EIT85429.1| DNA polymerase I [Bacillus macauensis ZFHKF-1]
Length = 877
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 185/585 (31%), Positives = 277/585 (47%), Gaps = 73/585 (12%)
Query: 1591 EIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLK 1650
E +E D KF ++ K V++Q+ GL+L G S
Sbjct: 360 EWIENEDKEKFVFDGK-------RVYVALQQ-AGLSLHGVSF------------------ 393
Query: 1651 DGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS--SEAAAAANRSGRWKNQMRRAAHNGC 1708
D+ I S++L P + SS+ ++ LS A + + K +A
Sbjct: 394 ---DVMIASYLLNPSE--SSDELASIAIRHHLSPPDHEDAVYGKGAKRKAPDVQALMEHT 448
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
R+ AL + L K L E + ++E+PL VLA ME G+ +D+E Q L
Sbjct: 449 VRKAKAIYALQAPLLKGLKENEQYDLFASLELPLSLVLAKMETLGVKIDLERLRQMGKEL 508
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
L LE + LAG+ F++ + + VL+ L LP+ K K ST L+ L
Sbjct: 509 TATLITLEADIHALAGVAFNINSPKQLGEVLFEKLGLPV---QKKTKTGYSTSVDVLEKL 565
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
++H I+ I +R L KL + + + + + + +H + Q T TGRLS E
Sbjct: 566 ENKHEIIEKILLYRQLGKLSSTYIEGLLKV----VHPESKKIHTRFNQALTQTGRLSSTE 621
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + +E R+ FIPS+E W +LAADYSQIELR++A
Sbjct: 622 PNLQNIPIRLELGR-----------------KIREAFIPSKEGWKILAADYSQIELRVLA 664
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H S+D L+ K DV T A ++ V SQ R K + +GI+YG+ LS
Sbjct: 665 HISQDENLMEAFKK-EMDVHTKTAMDVFHVEQEEVTSQMRRHAKAVNFGIVYGISDYGLS 723
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
+ LN + EA + I + +FPGV ++ VS +GYV +L R+R+L +I N
Sbjct: 724 QSLNITRKEASDFIHQYLQTFPGVEEYMKRIVSEAKHQGYVSTLLHRRRYLPEITSRNFN 783
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+S A+R A+N+ QG+AADIIK AM+ + D +L Q + ++LLQ
Sbjct: 784 LRSFAERTAMNTPIQGTAADIIKKAMVEM-----------DEAL----QREGMQAKMLLQ 828
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VHDEL+ EV +K+ +VQ+ ME A L VPL V + G+TW
Sbjct: 829 VHDELIFEVPEEEVKKLQEVVQRVMEQALALDVPLKVDMNSGNTW 873
>gi|228954856|ref|ZP_04116876.1| DNA polymerase I [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228804845|gb|EEM51444.1| DNA polymerase I [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 891
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPKLEVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVKKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|416052203|ref|ZP_11578105.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype e
str. SC1083]
gi|347992293|gb|EGY33702.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans serotype e
str. SC1083]
Length = 933
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 275/551 (49%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+IL + + N++ K+ L +
Sbjct: 424 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYIL----DSTGRHNMDDLAKRYLGHQTIGF 479
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPL 1742
+ +G+ KNQ+ A T L VLW+ L + + AL +IE+PL
Sbjct: 480 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWQKLQPQPGLVALYQSIELPL 539
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
+ VL+ ME G+ +D + N + ++L LE +A+ LAG F+L + + +L+
Sbjct: 540 LGVLSRMERCGVLIDSDALFLQSNEITERLTALEMQAHALAGQPFNLASTKQLQEILFDK 599
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 600 LGLPVLQKTPKGA--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 653
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE+ R
Sbjct: 654 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNEE-----------GRRIR 696
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 697 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 754
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 755 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPSVQTFIHDIREK 814
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + A+R A+N+ QG+AADIIK AMI + +
Sbjct: 815 AKAQGYVETLFGRRLYLPEINSSNAMRRKGAERVAINAPMQGTAADIIKRAMIKLDELTR 874
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
PD +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 875 D---DPD-------------IHMIMQVHDELVFEVRSEKIAFFSGLIKQHMEAAAELVVP 918
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 919 LIVDVGVGENW 929
>gi|229072089|ref|ZP_04205298.1| DNA polymerase I [Bacillus cereus F65185]
gi|229081839|ref|ZP_04214331.1| DNA polymerase I [Bacillus cereus Rock4-2]
gi|228701427|gb|EEL53921.1| DNA polymerase I [Bacillus cereus Rock4-2]
gi|228711023|gb|EEL62989.1| DNA polymerase I [Bacillus cereus F65185]
Length = 891
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPKLEVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVKKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|49481342|ref|YP_038632.1| DNA polymerase I [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|229093683|ref|ZP_04224782.1| DNA polymerase I [Bacillus cereus Rock3-42]
gi|49332898|gb|AAT63544.1| DNA polymerase I [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|228689568|gb|EEL43376.1| DNA polymerase I [Bacillus cereus Rock3-42]
Length = 891
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|52140922|ref|YP_085907.1| DNA polymerase I [Bacillus cereus E33L]
gi|51974391|gb|AAU15941.1| DNA polymerase I [Bacillus cereus E33L]
Length = 891
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|402555287|ref|YP_006596558.1| DNA polymerase I [Bacillus cereus FRI-35]
gi|401796497|gb|AFQ10356.1| DNA polymerase I [Bacillus cereus FRI-35]
Length = 877
Score = 239 bits (609), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDVQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLKSFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|206977131|ref|ZP_03238030.1| DNA polymerase I [Bacillus cereus H3081.97]
gi|217962066|ref|YP_002340636.1| DNA polymerase I [Bacillus cereus AH187]
gi|375286581|ref|YP_005107020.1| DNA polymerase I [Bacillus cereus NC7401]
gi|423355067|ref|ZP_17332692.1| DNA polymerase I [Bacillus cereus IS075]
gi|423570813|ref|ZP_17547058.1| DNA polymerase I [Bacillus cereus MSX-A12]
gi|423603737|ref|ZP_17579630.1| DNA polymerase I [Bacillus cereus VD102]
gi|206744616|gb|EDZ56024.1| DNA polymerase I [Bacillus cereus H3081.97]
gi|217064111|gb|ACJ78361.1| DNA polymerase I [Bacillus cereus AH187]
gi|358355108|dbj|BAL20280.1| DNA polymerase I [Bacillus cereus NC7401]
gi|401085244|gb|EJP93487.1| DNA polymerase I [Bacillus cereus IS075]
gi|401203440|gb|EJR10279.1| DNA polymerase I [Bacillus cereus MSX-A12]
gi|401246501|gb|EJR52848.1| DNA polymerase I [Bacillus cereus VD102]
Length = 877
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVDAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|423582798|ref|ZP_17558909.1| DNA polymerase I [Bacillus cereus VD014]
gi|423634535|ref|ZP_17610188.1| DNA polymerase I [Bacillus cereus VD156]
gi|401211613|gb|EJR18360.1| DNA polymerase I [Bacillus cereus VD014]
gi|401280514|gb|EJR86434.1| DNA polymerase I [Bacillus cereus VD156]
Length = 877
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD + L +
Sbjct: 452 VHVLYDIKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTDRLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIQKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|384182395|ref|YP_005568157.1| DNA polymerase I [Bacillus thuringiensis serovar finitimus YBT-020]
gi|324328479|gb|ADY23739.1| DNA polymerase I [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 877
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|152990932|ref|YP_001356654.1| DNA polymerase I [Nitratiruptor sp. SB155-2]
gi|151422793|dbj|BAF70297.1| DNA polymerase I [Nitratiruptor sp. SB155-2]
Length = 888
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 276/535 (51%), Gaps = 56/535 (10%)
Query: 1650 KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCC 1709
KD +D I++W++ P S+ LE V KR A + + + + + C
Sbjct: 403 KDIVDTMILAWLVDP----GSSVGLE-SVAKRFLDHDMIAYKETVKKGEDFSQVSIDAAC 457
Query: 1710 RRVAQTRALCSVLWKLLV-------SEELIEALLNIEIPLVNVLADMELWGIGVDMEGCL 1762
+ ++ + +++ L+ + LI+ +E P VN L ME GI +D+
Sbjct: 458 KYASEDAVITYMVYFKLLDALRKQGASHLIDEAKKVEFPFVNTLIHMEQAGIKIDIPFFE 517
Query: 1763 QARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDK 1822
+ ++ L+K++ + +K Y AG +F++ + +A +L+ LKLP K K ST++
Sbjct: 518 ELKSSLEKRIDEITQKIYEYAGGEFNINSTKQLAAILFEKLKLP---PLKKTKSGYSTNE 574
Query: 1823 HCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATG 1882
L L+ +HPI+P++ E+R L KL + + + + A+ K+ ++ ++QT TATG
Sbjct: 575 TTLQALKDKHPIIPLLLEYRELYKLKSTYIDPLINYAK---RDPKHRIYTSFIQTGTATG 631
Query: 1883 RLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQI 1942
RL+ + PNLQ + ++ ++ + YG FI + E +L+ DYSQI
Sbjct: 632 RLASKNPNLQNIP--IKTELGRKIRYG---------------FI-AGEGRLLIGIDYSQI 673
Query: 1943 ELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGM 2002
ELRL+AHFSKDPAL+ K D+ A + G+ ++R+ K + +G++YGM
Sbjct: 674 ELRLLAHFSKDPALLEAFQKGR-DIHMETAIKLFGKEH---AKEKRNIAKSINFGLIYGM 729
Query: 2003 GPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKI 2062
G L+E L S+ EAK I+S+ +SFP V S+L + GYVE+L R+R+
Sbjct: 730 GSRKLAETLGISTKEAKAIIESYFASFPTVKSYLESVENFAKTHGYVETLLKRRRYFD-F 788
Query: 2063 KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR 2122
+ + + R+A N++ QGSAAD+IK+AM I ++I + L A
Sbjct: 789 AHASGAQLAAYLREATNTVFQGSAADLIKMAMNKIKNVI------DEKQLEA-------- 834
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
++LLQ+HDEL+ EV + +E ++ M++ L VP+ +Q+ WG L+
Sbjct: 835 -KILLQIHDELIFEVQENQAQELAEEFKQIMQTIHPLNVPIECSVQIARNWGDLK 888
>gi|110630020|gb|ABG80522.1| DNA polymerase I [Geobacillus anatolicus]
gi|209360702|gb|ACI43003.1| DNA polymerase I [Geobacillus kaue]
Length = 878
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 263/545 (48%), Gaps = 60/545 (11%)
Query: 1633 GLENVGSSFLLLSPVHL----KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA 1688
G+E G +F LL +L +D D+ V+ + + R K K+ L E
Sbjct: 386 GIELRGVAFDLLLAAYLLNPAQDAGDVAAVAKMKQYEAVRPDEAVYGKGAKRSLPDEPTL 445
Query: 1689 AANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLAD 1748
A + R+ A AL L S E E L+ +E PL +LA+
Sbjct: 446 AEH----------------LVRKAAAIWALERPFLDELRSNEQDELLIKLEQPLATILAE 489
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIP 1808
ME G+ VD + Q + L ++L +E++ Y LAG +F++ + + +L+ L+LP+
Sbjct: 490 MEFTGVKVDTKRLEQMGSELAEQLGAVEQRIYELAGQEFNINSPKQLGIILFEKLQLPV- 548
Query: 1809 EGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKY 1868
K K ST L+ L H IV I +R L KL + + + + + T K
Sbjct: 549 --LKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYIEGLLKV--VHHDTGK- 603
Query: 1869 TLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+H + Q T TGRLS EPNLQ + +E + KI R F+PS
Sbjct: 604 -VHTMFNQALTQTGRLSSAEPNLQNIPIRLE---------------EGRKI--RQAFVPS 645
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
+ W++ AADYSQIELR++AH + D LI + D+ T A SE+ V + R
Sbjct: 646 EPGWLIFAADYSQIELRVLAHIADDDNLIEAFRR-DLDIHTKTAMDIFHVSEEEVTATMR 704
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K + +GI+YG+ L++ LN + EA E I+ + +SFPGV ++ V QKGY
Sbjct: 705 RQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKRYMETIVQEAKQKGY 764
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
V +L R+R+ I N +S A+R A+N+ QGSAADIIK AMI+
Sbjct: 765 VTTLLHRRRYFPDITSRNFNVRSFAERTAMNTPIQGSAADIIKKAMID------------ 812
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
LAA + + + RLLLQVHDEL+LE ++ LV + ME A L VPL V
Sbjct: 813 ---LAARLKEERLQARLLLQVHDELILEAPKEEMERLCQLVPEVMEQAVELRVPLKVDYH 869
Query: 2169 VGSTW 2173
G TW
Sbjct: 870 YGPTW 874
>gi|229048294|ref|ZP_04193862.1| DNA polymerase I [Bacillus cereus AH676]
gi|228723019|gb|EEL74396.1| DNA polymerase I [Bacillus cereus AH676]
Length = 891
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|365121705|ref|ZP_09338620.1| DNA polymerase I [Tannerella sp. 6_1_58FAA_CT1]
gi|363644992|gb|EHL84272.1| DNA polymerase I [Tannerella sp. 6_1_58FAA_CT1]
Length = 926
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 262/525 (49%), Gaps = 44/525 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++L P+ +R + L + K + G+ + MR+
Sbjct: 438 FDTMVAHYLLQPE-QRHNMDYLAEVYLKYKTVHIEELIGPKGKNQLSMRQVPIEKISEYA 496
Query: 1713 AQ----TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
A+ T L +V K L E L +IE+PL+ VLA+ME+ G+ VD E Q+ LL
Sbjct: 497 AEDADITLKLKNVFEKELKKEGLEPLFYSIEMPLIRVLAEMEITGVRVDTEALRQSSILL 556
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
+K+ LE++ Y LAG +F++ +A + VL+ LK+ K Q+ ST + L+ L
Sbjct: 557 TEKVLQLEQEIYQLAGTEFNVSSARQVGEVLFERLKIDEKAKKTKTGQY-STTEEILEKL 615
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
R +HPIV I E R + KLL+ + ++ L I+ T K +H + QT TATGRLS
Sbjct: 616 RSKHPIVGKILEQRGVKKLLSTYVNALPEL--INPKTGK--IHTSFNQTVTATGRLSSSN 671
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + D+ R FIP + + +ADYSQIELR+MA
Sbjct: 672 PNLQNIPIR-----------------DNEGREIRRAFIPD-DRCLFFSADYSQIELRIMA 713
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
S+DP +I + D+ AA+ + V R + K +GI+YG+ LS
Sbjct: 714 DLSEDPNMIEAFTSGK-DIHAATAAKIYKIPIEEVTPDMRRKAKTANFGIIYGISVFGLS 772
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
++LN +EAKE I + ++P + ++ ++ +KGYVE++ GRKR L I N+
Sbjct: 773 DRLNIPRSEAKELINGYFETYPHIKEYMDKSIQIAREKGYVETISGRKRMLPDINSKNSI 832
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+ A+R A+N+ QGSAADIIKIAM+ I F+ + R++LQ
Sbjct: 833 VRGYAERNAINAPIQGSAADIIKIAMVRIFD---------------RFEKNGLKARMILQ 877
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VHDEL V + I+ +V++ ME+A L VPL+ +G W
Sbjct: 878 VHDELNFSVPENEIEIVEHIVKEEMENAYQLKVPLIADSGIGKNW 922
>gi|228923331|ref|ZP_04086619.1| DNA polymerase I [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228836285|gb|EEM81638.1| DNA polymerase I [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
Length = 891
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD + L +
Sbjct: 466 VHVLYDIKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTDRLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIQKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|209360708|gb|ACI43006.1| DNA polymerase I [Anoxybacillus sp. NB]
Length = 878
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 263/545 (48%), Gaps = 60/545 (11%)
Query: 1633 GLENVGSSFLLLSPVHL----KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA 1688
G+E G +F LL +L +D D+ V+ + + R K K+ L E
Sbjct: 386 GIELRGVAFDLLLAAYLLNPAQDAGDVAAVAKMKQYEAVRPDEAVYGKGAKRSLPDEPTL 445
Query: 1689 AANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLAD 1748
A + R+ A AL L S E E L+ +E PL +LA+
Sbjct: 446 AEH----------------LVRKAAAIWALERPFLDELRSNEQDELLIKLEQPLATILAE 489
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIP 1808
ME G+ VD + Q + L ++L +E++ Y LAG +F++ + + +L+ L+LP+
Sbjct: 490 MEFTGVKVDTKRLEQMGSELAEQLGAVEQRIYELAGQEFNINSPKQLGIILFEKLQLPV- 548
Query: 1809 EGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKY 1868
K K ST L+ L H IV I +R L KL + + + + + T K
Sbjct: 549 --LKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYIEGLLKV--VHHDTGK- 603
Query: 1869 TLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+H + Q T TGRLS EPNLQ + +E + KI R F+PS
Sbjct: 604 -VHTMFNQALTQTGRLSSAEPNLQNIPIRLE---------------EGRKI--RQAFVPS 645
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
+ W++ AADYSQIELR++AH + D LI + D+ T A SE+ V + R
Sbjct: 646 EPGWLIFAADYSQIELRVLAHIADDDNLIEAFRR-DLDIHTKTAMDIFHVSEEEVTATMR 704
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K + +GI+YG+ L++ LN + EA E I+ + +SFPGV ++ V QKGY
Sbjct: 705 RQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKRYMETIVQEAKQKGY 764
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
V +L R+R+ I N +S A+R A+N+ QGSAADIIK AMI+
Sbjct: 765 VTTLLHRRRYFPDITSRNFNVRSFAERTAMNTPIQGSAADIIKKAMID------------ 812
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
LAA + + + RLLLQVHDEL+LE ++ LV + ME A L VPL V
Sbjct: 813 ---LAARLKEERLQARLLLQVHDELILEAPKEEMERLCQLVPEVMEQAVELRVPLKVDYH 869
Query: 2169 VGSTW 2173
G TW
Sbjct: 870 YGPTW 874
>gi|354603286|ref|ZP_09021285.1| hypothetical protein HMPREF9450_00200 [Alistipes indistinctus YIT
12060]
gi|353349163|gb|EHB93429.1| hypothetical protein HMPREF9450_00200 [Alistipes indistinctus YIT
12060]
Length = 1094
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 238/462 (51%), Gaps = 43/462 (9%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
T L VLW LL+ L E IE PL+ VLAD+E+ G+ +D L +L
Sbjct: 669 TLRLYRVLWPLLMQAGLTELYAKIEEPLIPVLADIEMTGVKIDTAALASFGQELTGELAA 728
Query: 1775 LEKKAYTLAG-MKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE++ G ++ +A + L+G +K+ K KQ+ TD+ L +L HP
Sbjct: 729 LEERIRETTGDPSLNVNSAKQLGEALFGRMKIDPKPKMTKTKQY-RTDEEYLQMLSDRHP 787
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
++ +I E+R L KLL+ + ++ L ++ +H + Q TATGRLS PNLQ
Sbjct: 788 VIGMILEYRGLRKLLSTYVDALPQL----VNPLTGRIHTSFNQAVTATGRLSSTNPNLQN 843
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ D R FIPS ++ +LL+ADYSQ+ELRLMAH S D
Sbjct: 844 IPIR-----------------DDRGREIRKAFIPSSDDRVLLSADYSQVELRLMAHLSGD 886
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
A+I HG D+ T AA +++ V ++R + K +GI+YG+ L+++LN
Sbjct: 887 RAMIEAFG--HGEDIHTATAALLFHAAKEDVTREQRRRAKTANFGIIYGISAFGLAQRLN 944
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
EAKE I + S+P + ++ + + GYVE+L GRKR L I+ GN +
Sbjct: 945 IPRTEAKEIIDGYFQSYPDIRQYMERVIDQARENGYVETLFGRKRMLPDIRSGNAVVRGL 1004
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKG-RCRLLLQVHD 2131
++R A+N+ QG AADI+K+AMI +H + KG + +++LQVHD
Sbjct: 1005 SERNAINAPIQGGAADIMKLAMIAVHGEL----------------RRKGLQSKIILQVHD 1048
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
ELVL+V S ++ +V +CME AA L V L+ + VG W
Sbjct: 1049 ELVLDVLLSEQEQVREIVIRCMEGAAELKVKLVAECGVGRNW 1090
>gi|301056092|ref|YP_003794303.1| DNA polymerase I [Bacillus cereus biovar anthracis str. CI]
gi|423549677|ref|ZP_17526004.1| DNA polymerase I [Bacillus cereus ISP3191]
gi|300378261|gb|ADK07165.1| DNA polymerase I [Bacillus cereus biovar anthracis str. CI]
gi|401190473|gb|EJQ97515.1| DNA polymerase I [Bacillus cereus ISP3191]
Length = 877
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|401679825|ref|ZP_10811749.1| DNA-directed DNA polymerase [Veillonella sp. ACP1]
gi|400218952|gb|EJO49823.1| DNA-directed DNA polymerase [Veillonella sp. ACP1]
Length = 874
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 239/467 (51%), Gaps = 40/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
C V A+ K L E L + NIE+PL++ L ME GI +D +
Sbjct: 445 CVSMVKALLAMDDAAVKALQDESLWDLYNNIELPLIHTLLVMEKNGIYIDPVKLEETTVK 504
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+ +L ++++ Y LAG F++ + + +L+ + LP+ + K K STD LD+
Sbjct: 505 FKAELEAVQQEIYELAGETFNINSPKQLGIILFEKMNLPVIK---KTKTGYSTDAEVLDM 561
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
LRHE PIV I +R++AKL++ + C + ++ + + +H + Q TATGRLS
Sbjct: 562 LRHESPIVEKILAYRSVAKLVS----TYCEGLSVLINPETHRIHTTFNQMVTATGRLSSS 617
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + E E+ R F P + L++ADYSQIELR++
Sbjct: 618 DPNLQNIPVRTE----------KGREI-------RALFYPGEGFDTLVSADYSQIELRIL 660
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D ALI ++ D+ AA G+S+D V S+ER K + +GI+YG+ L
Sbjct: 661 AHLSGDEALIKAFNEGK-DIHRFTAAEVLGKSQDEVTSEERSHAKAVNFGIIYGISDFGL 719
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S L + EAK I+ + S +P V ++ V+ H+ G V ++ GR R L I N
Sbjct: 720 SRDLGITRQEAKNYIELYFSRYPKVKEYMDNMVTEAHETGKVRTMFGRMRELPDINSRNF 779
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK+AM + SI+ +K RLLL
Sbjct: 780 NRRSFAERTAMNTPIQGTAADIIKLAMNKVESILEEKTFK---------------SRLLL 824
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
QVHDELVLEV + +L+++ MES L VPL+V + W
Sbjct: 825 QVHDELVLEVVNEELDAIQTLLKETMESIVELHVPLIVDVHNAENWA 871
>gi|384188661|ref|YP_005574557.1| DNA polymerase I [Bacillus thuringiensis serovar chinensis CT-43]
gi|410676983|ref|YP_006929354.1| DNA polymerase I [Bacillus thuringiensis Bt407]
gi|452201057|ref|YP_007481138.1| DNA polymerase I [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|326942370|gb|AEA18266.1| DNA polymerase I [Bacillus thuringiensis serovar chinensis CT-43]
gi|409176112|gb|AFV20417.1| DNA polymerase I [Bacillus thuringiensis Bt407]
gi|452106450|gb|AGG03390.1| DNA polymerase I [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 877
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 251/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELVGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDR 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|417851053|ref|ZP_12496845.1| DNA polymerase I [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|338220123|gb|EGP05692.1| DNA polymerase I [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
Length = 930
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 271/529 (51%), Gaps = 56/529 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D ++S++L + + N+++ K+ L + + +G+ K Q+ A
Sbjct: 445 DTMLLSYVL----DSTGRHNMDELAKRYLGHQTIHFEDIAGKGKAQLTFNQIPLEQAAEY 500
Query: 1708 CCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
T L VLW K+ EL++ +E+PL +VL+ +E G+ +D +
Sbjct: 501 AAEDADITMKLQQVLWEKVAAQPELVKLYQTMELPLASVLSRIERHGVLIDSDALFSQSQ 560
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+ +L LE++AY LAG +F+L + + +L+ L LP+ + KG PST++ L+
Sbjct: 561 QIGVRLTALEQQAYELAGQQFNLASTKQLQEILFNKLSLPVLKKTPKGA--PSTNEEVLE 618
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT--LHGHWLQTSTATGRL 1884
L +EH + ++ EHR L+KL + ++ + K T +H + Q TATGRL
Sbjct: 619 ELAYEHALPKILVEHRGLSKLKSTYTD------KLPLMVNKDTGRVHTSYHQAVTATGRL 672
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + + NE+ G R FI + E + ++AADYSQIEL
Sbjct: 673 SSSDPNLQNI------PIRNEE---GR--------RIRQAFI-APEGYQIMAADYSQIEL 714
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH S+D LI ++ D+ AA G V S++R K + +G++YGM
Sbjct: 715 RIMAHLSQDKGLINAFNEGK-DIHRSTAAEIFGIPLAQVSSEQRRSAKAINFGLIYGMSS 773
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QL +EA++ + + +PGV +++H + +GYV +L R+ +L I+
Sbjct: 774 FGLSRQLGIPRHEAQKYMDLYFQRYPGVQAFMHDIRETAKAQGYVTTLFDRRLYLPDIQS 833
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK AMI + I G +PD +
Sbjct: 834 SNAIRRKAAERVAINAPMQGTAADIIKRAMITLDREIAG---QPD-------------IK 877
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV I+ ++++ ME AALL+VPL+V + VG W
Sbjct: 878 MIMQVHDELVFEVRSDKIEHFRTIIKTTMEQAALLVVPLIVDVGVGKNW 926
>gi|209360704|gb|ACI43004.1| DNA polymerase I [Geobacillus anatolicus]
Length = 878
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 263/545 (48%), Gaps = 60/545 (11%)
Query: 1633 GLENVGSSFLLLSPVHL----KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA 1688
G+E G +F LL +L +D D+ V+ + + R K K+ L E
Sbjct: 386 GIELRGVAFDLLLAAYLLNPAQDAGDVAAVAKMKQYEAVRPDEAVYGKGAKRSLPDEPTL 445
Query: 1689 AANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLAD 1748
A + R+ A AL L S E E L+ +E PL +LA+
Sbjct: 446 AEH----------------LVRKAAAIWALERPFLDELRSNEQDELLIKLEQPLATILAE 489
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIP 1808
ME G+ VD + Q + L ++L +E++ Y LAG +F++ + + +L+ L+LP+
Sbjct: 490 MEFTGVKVDTKRLEQMGSELAEQLGAVEQRIYELAGQEFNINSPKQLGIILFEKLQLPV- 548
Query: 1809 EGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKY 1868
K K ST L+ L H IV I +R L KL + + + + + T K
Sbjct: 549 --LKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYIEGLLKV--VHHDTGK- 603
Query: 1869 TLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+H + Q T TGRLS EPNLQ + +E + KI R F+PS
Sbjct: 604 -VHTMFNQALTQTGRLSSAEPNLQNIPIRLE---------------EGRKI--RQAFVPS 645
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
+ W++ AADYSQIELR++AH + D LI + D+ T A SE+ V + R
Sbjct: 646 EPGWLIFAADYSQIELRVLAHIADDDNLIEAFRR-DLDIHTKTAMDIFHVSEEEVTATMR 704
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K + +GI+YG+ L++ LN + EA E I+ + +SFPGV ++ V QKGY
Sbjct: 705 RQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKRYMETIVQEAKQKGY 764
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
V +L R+R+ I N +S A+R A+N+ QGSAADIIK AMI+
Sbjct: 765 VTTLLHRRRYFPDITSRNFNVRSFAERTAMNTPIQGSAADIIKKAMID------------ 812
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
LAA + + + RLLLQVHDEL+LE ++ LV + ME A L VPL V
Sbjct: 813 ---LAARLKEERLQARLLLQVHDELILEAPKEEMERLCQLVPEVMEQAVELRVPLKVDYH 869
Query: 2169 VGSTW 2173
G TW
Sbjct: 870 YGPTW 874
>gi|42783764|ref|NP_981011.1| DNA polymerase I [Bacillus cereus ATCC 10987]
gi|42739694|gb|AAS43619.1| DNA polymerase I [Bacillus cereus ATCC 10987]
Length = 877
Score = 238 bits (608), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGREFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|229180906|ref|ZP_04308241.1| DNA polymerase I [Bacillus cereus 172560W]
gi|229192788|ref|ZP_04319746.1| DNA polymerase I [Bacillus cereus ATCC 10876]
gi|228590627|gb|EEK48488.1| DNA polymerase I [Bacillus cereus ATCC 10876]
gi|228602463|gb|EEK59949.1| DNA polymerase I [Bacillus cereus 172560W]
Length = 891
Score = 238 bits (608), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPKLEVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L +
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMNH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|209360700|gb|ACI43002.1| DNA polymerase I [Geobacillus bogazici]
Length = 878
Score = 238 bits (608), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 264/545 (48%), Gaps = 60/545 (11%)
Query: 1633 GLENVGSSFLLLSPVHL----KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA 1688
G+E G +F LL +L +D D+ V+ + + R K K+ L E
Sbjct: 386 GIELRGVAFDLLLAAYLLNPAQDAGDVAAVAKMKQYEAVRPDEAVYGKGAKRSLPDEPTL 445
Query: 1689 AANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLAD 1748
A + R+ A AL L S E E L+ +E PL +LA+
Sbjct: 446 AEH----------------LVRKAAAIWALERPFLDELRSNEQDELLIKLEQPLATILAE 489
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIP 1808
ME G+ VD + Q + L ++L +E++ Y LAG +F++ + + +L+ L+LP+
Sbjct: 490 MEFTGVKVDTKRLEQMGSELAEQLGAVEQRIYELAGQEFNINSPKQLGIILFEKLQLPV- 548
Query: 1809 EGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKY 1868
K K ST L+ L H IV I +R L KL + + + + + T K
Sbjct: 549 --LKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYIEGLLKV--VHHDTGK- 603
Query: 1869 TLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+H + Q T TGRLS EPNLQ + +E + KI R F+PS
Sbjct: 604 -VHTMFNQALTQTGRLSSAEPNLQNIPIRLE---------------EGRKI--RQAFVPS 645
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
+ W++ AADYSQIELR++AH + D LI + D+ T A SE+ V + R
Sbjct: 646 EPGWLIFAADYSQIELRVLAHIADDDNLIEAFRR-DLDIHTKTAMDIFHVSEEEVTATMR 704
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K + +GI+YG+ L++ LN + EA E I+ + +SFPGV ++ V QKGY
Sbjct: 705 RQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKRYMENIVQEAKQKGY 764
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
V +L R+R+L I N +S A+R A+N+ QGSAADIIK AMI+
Sbjct: 765 VTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMID------------ 812
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
LAA + + + RLLLQVHDEL+LE ++ LV + ME A L VPL V
Sbjct: 813 ---LAARLKEERLQARLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVELRVPLKVDYH 869
Query: 2169 VGSTW 2173
G TW
Sbjct: 870 YGPTW 874
>gi|359396295|ref|ZP_09189347.1| DNA polymerase I [Halomonas boliviensis LC1]
gi|357970560|gb|EHJ93007.1| DNA polymerase I [Halomonas boliviensis LC1]
Length = 894
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 199/680 (29%), Positives = 318/680 (46%), Gaps = 98/680 (14%)
Query: 1498 FDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHR 1557
FD +L R + + FD+ + ++ EI G+ + E Y+ L D +
Sbjct: 305 FDRWLTRLQNAERYCFDLETTSLNYMDA----EIVGVGLALEAGEAAYIPLAHDYLDAPQ 360
Query: 1558 RKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAV 1617
+ DR + + L P ++E K N+K I VL + A+
Sbjct: 361 QLDRKAVLAA-----LKP----------------LLEDPTKTKIGQNLKYDISVLANYAI 399
Query: 1618 SIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKE 1677
S V F D + S++L R +L +
Sbjct: 400 S------------------VAGPF-----------ADTMLASYVLNSTATRHDMDSLALK 430
Query: 1678 V--KKRLSSEAAAAANRSGRWKNQMR-RAAHNGCCRRVAQTRALCSVLWKLLVSE-ELIE 1733
+K +S E A NQ+ A C V T L L + +E L E
Sbjct: 431 YLGEKTISFEEIAGKGAKQLTFNQIALEQAAPYACEDVDITLRLQQTLRPQVENEGRLAE 490
Query: 1734 ALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAA 1793
L NIE+PL+ VL+ +E G+ VD + + L+K++ LE++A+ LAG +F+L +
Sbjct: 491 VLDNIELPLIKVLSRIERNGVAVDADLLHKQSQQLEKRIGELEREAFELAGREFNLGSPK 550
Query: 1794 DIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLG 1853
+ +L+ K+P+ + KG PST + L+ L ++P+ VI +HR LAKL +
Sbjct: 551 QLGQILFEEQKIPVLKKTPKGA--PSTAEGVLEELALDYPLPKVIMQHRGLAKLKSTYTD 608
Query: 1854 SICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAE 1913
+ L ++ +T + +H + Q TATGRLS +PNLQ + E
Sbjct: 609 KLPRL--LNKATGR--VHTSYHQAVTATGRLSSSDPNLQNIPIRTE-------------- 650
Query: 1914 VDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAA 1973
+ KI R FI ++ + ++AADYSQIELR+MAH S+D L+ ++ D+ T AA
Sbjct: 651 -EGRKI--RQAFI-ARPGYRIVAADYSQIELRIMAHLSEDKGLLEAFAEGR-DIHTATAA 705
Query: 1974 RWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVA 2033
G S + V +R K + +G++YGM LS QL+ N+A+ I + +PGVA
Sbjct: 706 EVFGTSLEKVSGDQRRSAKAINFGLIYGMSAWGLSRQLHIERNQAQTYIDRYFDRYPGVA 765
Query: 2034 SWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIA 2093
++ S + G+VE++ GR+ +L +I+ N + A+R A+N+ QG+AADIIK A
Sbjct: 766 RYMERIRSQAAEDGFVETVLGRRLYLPEIQSQNRNRRQGAERTAINAPMQGTAADIIKQA 825
Query: 2094 MINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCM 2153
MI++ + + G F L +++QVHDELV EV + + VQK M
Sbjct: 826 MIDVDAWLAEG----------EFDAL-----MVMQVHDELVFEVAEKQVDAFIEQVQKRM 870
Query: 2154 ESAALLLVPLLVKIQVGSTW 2173
+ AA L VPL+V+ + G+ W
Sbjct: 871 QGAAALKVPLIVEAESGANW 890
>gi|219520265|gb|AAI45379.1| Poln protein [Mus musculus]
Length = 848
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 274/549 (49%), Gaps = 63/549 (11%)
Query: 1648 HLKD--GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH 1705
H+ D G+D + +W++ P D + P+ E V K L E + S ++ R
Sbjct: 341 HVADFVGLDPRVAAWLIDPSD---TAPSFEDLVAKHL--EKSITVKPSSTFREASRNTLS 395
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
C + L L L + L + +E+PL+ +LA ME I VD E +
Sbjct: 396 QNVCMNLKILYDLTMDLCSKLKAYGLWQLFCTLELPLIPILAVMENHKIPVDKEEMERTS 455
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN----KGKQHP-ST 1820
LL +L+ LE++A+ +AG +F + + + +L+G LKL + G Q+ ST
Sbjct: 456 ALLGARLKELEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLLSQRKHLPRTGLQNQLST 515
Query: 1821 DKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTA 1880
+ L+ L+ HP+ +I E+R GSI S W QT T
Sbjct: 516 SEAMLNSLQDLHPLPKLILEYRQ---------GSISST---------------WNQTGTV 551
Query: 1881 TGRLSMEEPNLQCV-EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADY 1939
TGRLS + PN+Q + +H + K+S + G E + I+ R F+ S E LAAD+
Sbjct: 552 TGRLSAKHPNIQGISKHPI--KISKPWNFKGKEE-ETVTISPRTLFV-SSEGHTFLAADF 607
Query: 1940 SQIELRLMAHFSKDPALIGLLSKPH-GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGI 1998
SQIELR++AH S DP L+ L + DVF+ + ++W + V +R+QTK+++Y +
Sbjct: 608 SQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDIPIERVTHMDREQTKKVVYSV 667
Query: 1999 LYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF 2058
+YG G L+ L + EA ++ F + + + + CH GYV S+ GR+R
Sbjct: 668 VYGAGKERLAACLGVTVLEATHFLERFLQKYKKIKDFAQTVIGQCHSAGYVTSILGRRRP 727
Query: 2059 LSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQM 2118
L +I + + +++A+RQAVN + QGSAAD+ K+AMI I + + +L A
Sbjct: 728 LPRICAQDQQLRAQAERQAVNFVVQGSAADLCKLAMIRISTAVATS-----PTLTA---- 778
Query: 2119 LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA-------LLLVPLLVKIQVGS 2171
RL+ Q+HDEL+ EV+ + + E +LV++ MES L VPL V + VG
Sbjct: 779 -----RLVAQIHDELLFEVEDTQVPEFAALVRRIMESLQQVQTLELQLQVPLKVNLSVGR 833
Query: 2172 TWGSLEPFQ 2180
+WG L P Q
Sbjct: 834 SWGHLTPLQ 842
>gi|228917225|ref|ZP_04080782.1| DNA polymerase I [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228842426|gb|EEM87517.1| DNA polymerase I [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 891
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E +++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|456863141|gb|EMF81631.1| DNA-directed DNA polymerase [Leptospira weilii serovar Topaz str.
LT2116]
Length = 917
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 173/557 (31%), Positives = 282/557 (50%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G +L+ + D + S+++ P+ R N++ K L+
Sbjct: 408 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVIQPEGRRH---NMDALAKDLLN 457
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ N +G+ K ++ A+ + L+++ + E +E +L N
Sbjct: 458 YDTITYDNLVGTGKKKKELTDIDPEQVAEYAAEDADITFRLYQIFRKKIKESGVEPILRN 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PL++VLA ME GI +D+ + +++R+LE + + A F++ + ++
Sbjct: 518 IEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQADRSFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL I + G STD L+ L EHPIV + ++R KL + + ++
Sbjct: 578 ILFDDLKLKIVKKTQTGY---STDHEVLEELLGEHPIVEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D G
Sbjct: 635 M----VNPRTGRIHTSYNQTIAATGRLSSTDPNLQNI--------PIRDREG-------- 674
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
++ + F + S E + +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 675 RLLRKGFTVDSDE-YEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHIRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPEKEVTPEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R + I + K A+R A+NS QG++AD+IKIAMIN
Sbjct: 792 ESMVEFAEKNGYVQTLTGRRRPIIDINSTHKSAKEAAKRIAINSPVQGTSADMIKIAMIN 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I Y R R+LLQVHDELV EV +E + ++K ME+A
Sbjct: 852 IHEDIEKKHY---------------RSRMLLQVHDELVFEVHKKEKEEFKTSMKKHMENA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P+LV+ + G W
Sbjct: 897 MPLDLPILVEGKFGVNW 913
>gi|209360698|gb|ACI43001.1| DNA polymerase I [Geobacillus kaue]
Length = 878
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 263/545 (48%), Gaps = 60/545 (11%)
Query: 1633 GLENVGSSFLLLSPVHL----KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA 1688
G+E G +F LL +L +D D+ V+ + + R K K+ L E
Sbjct: 386 GIELRGVAFDLLLAAYLLNPAQDAGDVAAVAKMKQYEAVRPDEAVYGKGAKRSLPDEPTL 445
Query: 1689 AANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLAD 1748
A + R+ A AL L S E E L+ +E PL +LA+
Sbjct: 446 AEH----------------LVRKAAAIWALERPFLDELRSNEQDELLIKLEQPLATILAE 489
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIP 1808
ME G+ VD + Q + L ++L +E++ Y LAG +F++ + + +L+ L+LP+
Sbjct: 490 MEFTGVKVDTKRLEQMGSELAEQLGAIEQRIYELAGQEFNINSPKQLGIILFEKLQLPV- 548
Query: 1809 EGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKY 1868
K K ST L+ L H IV I +R L KL + + + + + T K
Sbjct: 549 --LKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYIEGLLKV--VHHDTGK- 603
Query: 1869 TLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+H + Q T TGRLS EPNLQ + +E + KI R F+PS
Sbjct: 604 -VHTMFNQALTQTGRLSSAEPNLQNIPIRLE---------------EGRKI--RQAFVPS 645
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
+ W++ AADYSQIELR++AH + D LI + D+ A SE+ V + R
Sbjct: 646 EPGWLIFAADYSQIELRVLAHIADDDNLIEAFRR-DLDIHAKTAMDIFHVSEEEVTATMR 704
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K + +GI+YG+ L++ LN + EA E I+ + +SFPGV ++ V QKGY
Sbjct: 705 RQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKRYMETIVQEAKQKGY 764
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
V +L R+R+L I N +S A+R A+N+ QGSAADIIK AMI+
Sbjct: 765 VTTLLHRRRYLPDITSRNFNVRSFAERTAMNTPIQGSAADIIKKAMID------------ 812
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
LAA + + + RLLLQVHDEL+LE ++ LV + ME A L VPL V
Sbjct: 813 ---LAARLKEERLQARLLLQVHDELILEAPKEEMERLCQLVPEVMEQAVELRVPLKVDYH 869
Query: 2169 VGSTW 2173
G TW
Sbjct: 870 YGPTW 874
>gi|49187477|ref|YP_030729.1| DNA polymerase I [Bacillus anthracis str. Sterne]
gi|228935894|ref|ZP_04098704.1| DNA polymerase I [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|229124153|ref|ZP_04253345.1| DNA polymerase I [Bacillus cereus 95/8201]
gi|386738483|ref|YP_006211664.1| DNA polymerase I [Bacillus anthracis str. H9401]
gi|49181404|gb|AAT56780.1| DNA polymerase I [Bacillus anthracis str. Sterne]
gi|228659455|gb|EEL15103.1| DNA polymerase I [Bacillus cereus 95/8201]
gi|228823662|gb|EEM69484.1| DNA polymerase I [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|384388335|gb|AFH85996.1| DNA polymerase I [Bacillus anthracis str. H9401]
Length = 891
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E +++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|342903660|ref|ZP_08725468.1| DNA polymerase I [Haemophilus haemolyticus M21621]
gi|341954911|gb|EGT81380.1| DNA polymerase I [Haemophilus haemolyticus M21621]
Length = 935
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 265/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D ++S+ L + N++ K+ L E + +G+ K Q+ A
Sbjct: 449 FDTMLLSYTL----NSTGRHNMDDLAKRYLGHETIEFESIAGKGKGQLTFNQIPLEQATE 504
Query: 1707 GCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW KL L++ +E+PL++VL+ ME G+ +D +
Sbjct: 505 YAAEDADVTMKLQQALWLKLQEEPTLVKLYKTMELPLLHVLSRMERTGVLIDSDALFMQS 564
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
N + +L LE++AY LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 565 NEIATRLTALEEQAYALAGQPFNLASTKQLQEILFDKLGLPVLQKTPKGA--PSTNEEVL 622
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L + H + ++ EHR L+KL + + + +++Q +H + Q TATGRLS
Sbjct: 623 EELAYNHELPKILVEHRGLSKLKSTYTDKLPQM----VNSQTGRVHTSYHQAVTATGRLS 678
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI ++E + ++AADYSQIELR
Sbjct: 679 SSDPNLQNI------PIRNEE---GR--------RIRQAFI-AREGYSIVAADYSQIELR 720
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D LI S+ D+ AA G S D V +++R K + +G++YGM
Sbjct: 721 IMAHLSGDQGLINAFSQGK-DIHRSTAAEIFGVSLDEVTNEQRRNAKAINFGLIYGMSAF 779
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL S +A++ + + +PGV ++ +GYVE+L GR+ +L I
Sbjct: 780 GLSRQLGISRPDAQKYMDLYFQRYPGVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSS 839
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI + II + PD +
Sbjct: 840 NAMRRKGAERVAINAPMQGTAADIIKRAMIKLDEII---HHDPD-------------IEM 883
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV + +++ ME+AA L+VPL+V++ VG W
Sbjct: 884 IMQVHDELVFEVRSEKVAFFREQIKQHMEAAAELVVPLIVEVGVGQNW 931
>gi|196040840|ref|ZP_03108138.1| DNA-directed DNA polymerase [Bacillus cereus NVH0597-99]
gi|196028294|gb|EDX66903.1| DNA-directed DNA polymerase [Bacillus cereus NVH0597-99]
Length = 877
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|38146967|gb|AAR11868.1| DNA polymerase I [[Caldibacillus] cellulovorans]
Length = 903
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 173/524 (33%), Positives = 255/524 (48%), Gaps = 42/524 (8%)
Query: 1652 GIDMC--IVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCC 1709
G C I +++L P + R + +L + EA + ++K R
Sbjct: 416 GTSFCTHIAAYLLDPTESRHTLADLSRRYGLPPVPEAEDVYGKGAKFKVPDRDTLARYVG 475
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
R+ A L +L L + + ++E+PL + LA ME G+ VD L+
Sbjct: 476 RKAALVARLVPLLEADLAACGMRSLFYDLELPLSSELAVMETVGVRVDAAALAAYGEELR 535
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
+ +E++ Y LAG F++ + + +L+ L LP+ + K K STD L+ L
Sbjct: 536 EAAAKVEREIYELAGTTFNIGSTKQLGEILFDKLGLPVVK---KTKTGYSTDADVLEELA 592
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
HPIV I +R L KL + + + L I T K +H ++ QT ATGRLS + P
Sbjct: 593 PYHPIVEKILHYRQLTKLQSTYIEGL--LKEIRPQTGK--IHTYYQQTIAATGRLSSQFP 648
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + +E + KI R F+PS+ W++LAADYSQIELR++AH
Sbjct: 649 NLQNIPIRLE---------------EGRKI--RKAFVPSEPGWLMLAADYSQIELRVLAH 691
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
S D L + D+ T A G SED V ++ R Q K + +GI+YG+ L++
Sbjct: 692 VSGDERLKEAF-RTGMDIHTKTAMDVFGVSEDRVDARMRRQAKAVNFGIIYGISDFGLAQ 750
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
LN S EA E I+ + + F GV ++ V + GYV +L GR+R+L I N
Sbjct: 751 NLNISRKEAAEFIRQYFAVFSGVKAYRERIVEQARRDGYVTTLLGRRRYLPDINASNYNL 810
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S A+R A+N+ QG+AADIIK AM+ L + + + R+LLQV
Sbjct: 811 RSFAERTAMNTPIQGTAADIIKTAMVR---------------LTRRMRDVGLKSRMLLQV 855
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDELV EV P + LV MESA L VPL V + G+ W
Sbjct: 856 HDELVFEVPPDELDAMRELVTDVMESAVPLDVPLKVDVSWGADW 899
>gi|443243656|ref|YP_007376881.1| DNA polymerase I [Nonlabens dokdonensis DSW-6]
gi|442801055|gb|AGC76860.1| DNA polymerase I [Nonlabens dokdonensis DSW-6]
Length = 945
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 237/437 (54%), Gaps = 38/437 (8%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+PL++VLA ME+ G+ +D + L + + LEK Y AG +F++ + +
Sbjct: 543 DIEMPLLDVLAAMEIEGVNLDGDFLSSLSRKLNEDIERLEKDIYEAAGEEFNIGSPKQLG 602
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L+G +KL K Q+ ST + L L +H I+ + E+R LAKL + + ++
Sbjct: 603 EILFGKMKLVDKPKKTKTGQY-STAEDVLSYLAKDHQIIADVLEYRGLAKLKSTYVDALP 661
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
+ +++ +T + +H +++QT ATGRLS +PNLQ + E
Sbjct: 662 N--QVNPATHR--IHTNYMQTVAATGRLSSTDPNLQNIPIRTERGRQ------------- 704
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R F+P EN+ L+AADYSQIELR++A S++ +I D+ AA+
Sbjct: 705 ----VRKAFVPRDENYTLVAADYSQIELRIIAALSEEENMIAAFQGGE-DIHASTAAKVF 759
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
+ + V ++R K + +GI+YG+ LS Q + +EAKE I ++ +++P + +++
Sbjct: 760 NVAIEDVTREQRSNAKTVNFGIIYGVSAFGLSNQTDLDRSEAKELIDTYYATYPKLKAYM 819
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYVE++ GR+R+L I N + A+R AVN+ QGSAADIIKIAMIN
Sbjct: 820 QEQVDFARENGYVETVLGRRRYLKNINSSNAVVRGAAERNAVNAPIQGSAADIIKIAMIN 879
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH F+ ++ + ++LLQVHDELV ++ +++ L+Q M++A
Sbjct: 880 IHK---------------KFEKMQCQSKMLLQVHDELVFDIHNDELEDMKKLIQDEMQNA 924
Query: 2157 ALLLVPLLVKIQVGSTW 2173
+ VPL V++ VG W
Sbjct: 925 YKMTVPLDVEVGVGENW 941
>gi|294664756|ref|ZP_06730083.1| DNA polymerase I [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292605467|gb|EFF48791.1| DNA polymerase I [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 934
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 235/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L SE +E + +IE+PLV+VLA +E G+ VD + L K++
Sbjct: 511 TLRLHRVLGPRLTSEPGLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 570
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 571 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 628
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 629 LPRVILEYRGLTKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 684
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P L+A DYSQIELR+MAH S D
Sbjct: 685 IPIRTE---------------DGRRIR-RAFVAPPGRK--LIACDYSQIELRIMAHLSGD 726
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G DV AA GR+ D+V + ER K + +G++YGM L+ QL
Sbjct: 727 PGLVGAFES-GADVHRATAAEVFGRTIDTVSADERRAAKAINFGLMYGMSAFGLARQLGI 785
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 786 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 845
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+N+ D +A + Q R +++LQVHDEL
Sbjct: 846 ERAAINAPMQGTAADIIKRAMVNV-----------DGWIADHAQ----RAKMILQVHDEL 890
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M AA L VPL+V VG W
Sbjct: 891 VFEADVDFVDTLLSEVTTRMAGAAELRVPLVVDSGVGDNW 930
>gi|206603236|gb|EDZ39716.1| DNA polymerase I [Leptospirillum sp. Group II '5-way CG']
Length = 872
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 159/464 (34%), Positives = 233/464 (50%), Gaps = 45/464 (9%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
R + S LW V E L+E + +IEIPL +L ME+ G+ +D + AR ++ R
Sbjct: 453 VRNILSRLWDDAVKEGLLELVQSIEIPLGRILYQMEVLGVRIDRQALESARESIEALSRE 512
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
LE++ Y LAG +F++ + + +LYG L LP KGK STD+ L L HP+
Sbjct: 513 LEEEIYRLAGSRFTILSPKQVGEILYGKLGLPT---ARKGKTGYSTDEETLTRLSALHPL 569
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
I +R + KLL+ + I + Q LHG + QT TATGRLS PNLQ +
Sbjct: 570 PEKILAYRQMKKLLSTYVDPIAR----GIDAQG-RLHGQFNQTVTATGRLSSSNPNLQNI 624
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
E+ C I + EN +LL+ADYSQIELRL+AHFS+DP
Sbjct: 625 PMRSP----------AGREIRKCFI--------AGENRVLLSADYSQIELRLLAHFSEDP 666
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+ + + + D+ A G D V + R + K + +GILYGM +LS+ L
Sbjct: 667 ELMAVFER-NEDIHARTARLLFG---DPVTPETRRKAKTINFGILYGMSAFSLSQDLGVE 722
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
S EA+ I + +FP V + + G V ++ GRKR + ++ + + + +
Sbjct: 723 SQEAQAFIDRYFGAFPKVGPLFDSILEEAKKTGEVRTILGRKRRIPELFASDRRSREYGE 782
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
R AVN++ QGSAAD+IK +M++ G V K + LL+QVHDEL+
Sbjct: 783 RMAVNTVLQGSAADLIKKSMVDF-----GQVRKDRPEIGD----------LLVQVHDELL 827
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEP 2178
EV + EA ++ ME A L VPL+V++ G W P
Sbjct: 828 FEVREDNLDEASGTIRSLMEGALRLKVPLVVQVGQGKNWVDAHP 871
>gi|4105277|gb|AAD02338.1| putative DNA polymerase [Homo sapiens]
Length = 579
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/457 (32%), Positives = 252/457 (55%), Gaps = 33/457 (7%)
Query: 1731 LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
L + +E+PL+ +LA ME I V+ E + LL +L+ LE++A+ +AG +F +
Sbjct: 53 LWQLFRTLELPLIPILAVMESHAIQVNKEEMEKTSALLGARLKELEQEAHFVAGERFLIT 112
Query: 1791 TAADIANVLYGHLKLPIPEGHNKG-----KQHPSTDKHCLDLLRHEHPIVPVIKEHRTLA 1845
+ + +L+G LKL + N +++PST L+ LR HP+ +I E+R +
Sbjct: 113 SNNQLREILFGKLKLHLLSQRNSLPRTGLQKYPSTVSEALNALRDLHPLPKIILEYRQVH 172
Query: 1846 KLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV-EHMVEFKMSN 1904
K+ + + + + + K ++ W QT T TGRLS + PN+Q + +H ++ +
Sbjct: 173 KIKSTFVDGLLACMK------KGSISSTWNQTGTVTGRLSAKHPNIQGISKHPIQI-TTP 225
Query: 1905 EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP- 1963
++ G ++ I+ R F+ S+ + LAAD+SQIELR++ H S DP L+ L +
Sbjct: 226 KNFKGKEDKI--LTISPRAMFVSSKGH-TFLAADFSQIELRILTHLSGDPELLKLFQESE 282
Query: 1964 HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIK 2023
DVF+ + ++W + V +R+QTK+++Y ++YG G L+ L EA + ++
Sbjct: 283 RDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAVVYGAGKERLAACLGVPIQEAAQFLE 342
Query: 2024 SFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQ 2083
SF + + + A++ CHQ G V S+ GR+R L +I + + +++A+RQAVN + Q
Sbjct: 343 SFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRPLPRIHAHDQQLRAQAERQAVNFVVQ 402
Query: 2084 GSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIK 2143
GSAAD+ K+AMI++ + + +L A RL+ Q+HDEL+ EV+ I
Sbjct: 403 GSAADLCKLAMIHVFTAVAA-----SHTLTA---------RLVAQIHDELLFEVEDPQIP 448
Query: 2144 EAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
E +LV++ MES L VPL V + G +WG L P Q
Sbjct: 449 ECAALVRRTMES--LEQVPLKVSLSAGRSWGHLVPLQ 483
>gi|294626790|ref|ZP_06705383.1| DNA polymerase I [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292598906|gb|EFF43050.1| DNA polymerase I [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 934
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 235/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L SE +E + +IE+PLV+VLA +E G+ VD + L K++
Sbjct: 511 TLRLHRVLGPRLTSEPGLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 570
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 571 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 628
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 629 LPRVILEYRGLTKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 684
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P L+A DYSQIELR+MAH S D
Sbjct: 685 IPIRTE---------------DGRRIR-RAFVAPPGRK--LIACDYSQIELRIMAHLSGD 726
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G DV AA GR+ D+V + ER K + +G++YGM L+ QL
Sbjct: 727 PGLVGAFES-GADVHRATAAEVFGRTIDTVSADERRAAKAINFGLMYGMSAFGLARQLGI 785
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 786 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 845
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+N+ D +A + Q R +++LQVHDEL
Sbjct: 846 ERAAINAPMQGTAADIIKRAMVNV-----------DGWIADHAQ----RAKMILQVHDEL 890
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M AA L VPL+V VG W
Sbjct: 891 VFEADVDFVDTLLSEVTTRMAGAAELRVPLVVDSGVGDNW 930
>gi|165869628|ref|ZP_02214286.1| DNA polymerase I [Bacillus anthracis str. A0488]
gi|254754671|ref|ZP_05206706.1| DNA polymerase I [Bacillus anthracis str. Vollum]
gi|164714457|gb|EDR19976.1| DNA polymerase I [Bacillus anthracis str. A0488]
Length = 877
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E +++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|433443886|ref|ZP_20409009.1| DNA polymerase I [Anoxybacillus flavithermus TNO-09.006]
gi|432001860|gb|ELK22727.1| DNA polymerase I [Anoxybacillus flavithermus TNO-09.006]
Length = 875
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 255/524 (48%), Gaps = 46/524 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D+ + +++L P D +N ++ K + ++ + G+ Q + V
Sbjct: 391 FDLLLAAYLLNPTD---ANGDVAAVAKTKQYTDVQSDEEVYGKGAKQAIPPTNVLAEHLV 447
Query: 1713 AQTRALCSV---LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
+ +A+ S+ + L E E L+++E+PL +LA ME +G+ VD++ Q
Sbjct: 448 RKAKAIASLKETYIQELKRNEQFELLVHLELPLTFILAQMEFYGVKVDVDRLEQMGKEFT 507
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
+L +E++ Y LAG F++ + + +L+ L+LPI + K K ST L+ L
Sbjct: 508 AQLEQIEQRIYELAGTTFNINSPKQLGTILFEKLQLPIVK---KTKTGYSTSADVLEKLA 564
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
H I+ I +R L KL + + + + R +H + Q T TGRLS EP
Sbjct: 565 PYHEIIEQILHYRQLGKLQSTYVEGLMKVVRKDTGK----VHTIFQQALTQTGRLSSTEP 620
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + +E + KI R F+PS ++W++ AADYSQIELR++AH
Sbjct: 621 NLQNIPIRIE---------------EGRKI--RQAFVPSSDDWVIFAADYSQIELRVLAH 663
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
+ D LI D+ T A ED V + R Q K + +GI+YG+ LS+
Sbjct: 664 IANDENLIAAFHHDL-DIHTKTAMDIFHVKEDEVTAHMRRQAKAVNFGIVYGISDYGLSQ 722
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
L + EA E I+ + S+PGV ++ + QKGYV +L R+R+L I N
Sbjct: 723 NLGITRKEAAEFIERYFRSYPGVKRYMEEIIQDAKQKGYVTTLLHRRRYLPDITSSNFNV 782
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S A+R A+N+ QGSAADIIK AMI+ LA + + RLLLQV
Sbjct: 783 RSFAERTAMNTPIQGSAADIIKKAMID---------------LANRLHEERLQTRLLLQV 827
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDEL+LE I+ +V ME+A L VPL V G TW
Sbjct: 828 HDELILEAPKEEIELLKKIVPDVMENAVSLRVPLKVDYHFGPTW 871
>gi|228948311|ref|ZP_04110594.1| DNA polymerase I [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228811298|gb|EEM57636.1| DNA polymerase I [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
Length = 891
Score = 238 bits (607), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E +++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|374584538|ref|ZP_09657630.1| DNA polymerase I [Leptonema illini DSM 21528]
gi|373873399|gb|EHQ05393.1| DNA polymerase I [Leptonema illini DSM 21528]
Length = 974
Score = 238 bits (606), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 258/528 (48%), Gaps = 50/528 (9%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAH 1705
G D I S+++ P+ N++ L + + +G + Q+ ++
Sbjct: 487 GFDTMIASYLMNPN---VRGHNMDDMAIAHLHYDTIKYEDVAGSGRKQLTLDQVDPQSVS 543
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
C T L +VL L E+L + +IEIPL+ VL+DME+ G+ +D +
Sbjct: 544 TYSCEDADITYRLYNVLAPRLKKEKLDKVHDDIEIPLIEVLSDMEMAGVAIDAPYFAKLS 603
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
+KK++ LEKK Y G +F++ + ++ +L+ +KLP K K STD+ L
Sbjct: 604 KDYEKKIKSLEKKIYEETGSEFNIQSTKELQTILFDKMKLP---AEKKTKTGYSTDQSVL 660
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ LR HP+V + +HR KL + + ++ + ++ +H ++ QT ATGRLS
Sbjct: 661 EGLRGLHPVVDHLLDHRKYTKLKSTYVDALP----LMLNPNTGRIHTNFSQTIAATGRLS 716
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + E G A R F+P + N +LL+ DYSQIELR
Sbjct: 717 SNDPNLQNIPIREE---------TGRA--------IRRGFVPVKGN-VLLSLDYSQIELR 758
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH++ D ALI + D+ AA G SE+SV R Q K + + I+YG+
Sbjct: 759 IMAHYAGDKALIDAFAHDL-DIHRRTAAALFGVSEESVTPDMRSQAKTVNFSIIYGVTAF 817
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + A+ I F +PGV ++ + + GYV++L GR+R + I
Sbjct: 818 GLSQNLGVPRDVAQAYIDRFFEGYPGVRRYMDEMTAYAEKHGYVQTLSGRRRQVLDINST 877
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N K A R AVN+ QG++ADIIKIAMI IH + YK R+
Sbjct: 878 NRFRKEGAARIAVNTPVQGTSADIIKIAMIRIHEKMKSASYK---------------GRM 922
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+LQVHDEL+ +V P +L + MESA L VPL V G+ W
Sbjct: 923 ILQVHDELLFDVPPDEADAVEALARGEMESAMKLKVPLRVDGGRGANW 970
>gi|402563898|ref|YP_006606622.1| DNA polymerase I [Bacillus thuringiensis HD-771]
gi|423358328|ref|ZP_17335831.1| DNA polymerase I [Bacillus cereus VD022]
gi|401086015|gb|EJP94247.1| DNA polymerase I [Bacillus cereus VD022]
gi|401792550|gb|AFQ18589.1| DNA polymerase I [Bacillus thuringiensis HD-771]
Length = 877
Score = 238 bits (606), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDH 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V +KGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKRKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|228967684|ref|ZP_04128704.1| DNA polymerase I [Bacillus thuringiensis serovar sotto str. T04001]
gi|228792017|gb|EEM39599.1| DNA polymerase I [Bacillus thuringiensis serovar sotto str. T04001]
Length = 891
Score = 238 bits (606), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R +++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELKVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V +KGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKRKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|21244827|ref|NP_644409.1| DNA polymerase I [Xanthomonas axonopodis pv. citri str. 306]
gi|21110529|gb|AAM38945.1| DNA polymerase I [Xanthomonas axonopodis pv. citri str. 306]
Length = 934
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 235/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L SE +E + +IE+PLV+VLA +E G+ VD + R L K++
Sbjct: 511 TLRLHRVLGPRLASEPGLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQRADLSKRML 570
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 571 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 628
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 629 LPRVILEYRGLTKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 684
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P L+A DYSQIELR+MAH S D
Sbjct: 685 IPIRTE---------------DGRRIR-RAFVAPPGRK--LIACDYSQIELRIMAHLSGD 726
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G DV AA GR+ D+V + ER K + +G++YGM L+ QL
Sbjct: 727 PGLVGAFES-GADVHRATAAEVFGRTIDTVSADERRAAKAINFGLMYGMSAFGLARQLGI 785
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 786 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 845
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+ + D +A + Q R +++LQVHDEL
Sbjct: 846 ERAAINAPMQGTAADIIKRAMVKV-----------DGWIADHAQ----RAKMILQVHDEL 890
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M AA L VPL+V VG W
Sbjct: 891 VFEADIDFVDTLLSEVTTRMAGAAELRVPLVVDSGVGDNW 930
>gi|228929634|ref|ZP_04092652.1| DNA polymerase I [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|228830021|gb|EEM75640.1| DNA polymerase I [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 891
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E +++ LV + ME A L VPL V G TW
Sbjct: 850 EAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|228941766|ref|ZP_04104313.1| DNA polymerase I [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228974690|ref|ZP_04135256.1| DNA polymerase I [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228981284|ref|ZP_04141584.1| DNA polymerase I [Bacillus thuringiensis Bt407]
gi|228778484|gb|EEM26751.1| DNA polymerase I [Bacillus thuringiensis Bt407]
gi|228785093|gb|EEM33106.1| DNA polymerase I [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228817978|gb|EEM64056.1| DNA polymerase I [Bacillus thuringiensis serovar berliner ATCC 10792]
Length = 891
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 251/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELKKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELVGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDR 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|406673495|ref|ZP_11080716.1| DNA polymerase I [Bergeyella zoohelcum CCUG 30536]
gi|405585960|gb|EKB59752.1| DNA polymerase I [Bergeyella zoohelcum CCUG 30536]
Length = 938
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 231/459 (50%), Gaps = 39/459 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
T L + L E L IE+PL+ VLADME GI +D+ LQ L++ L+
Sbjct: 515 TFQLYEIFGPQLQKENLENLFFQIEMPLMKVLADMEREGIALDVNWLLQESKDLEQDLKN 574
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
+E+K +T +F+L + + VL+ LKL K Q+ +T + L L H HPI
Sbjct: 575 IEQKIFTFTENEFNLNSPKQLGEVLFDQLKLDPKAKKTKTGQY-ATSEDVLQKLAHTHPI 633
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
+P+I E+RT KL + + ++ + +S +H + QT+ ATGRL+ PNLQ +
Sbjct: 634 IPLILEYRTYQKLKSTYVDALPT----QISKIDGRVHTSFSQTTAATGRLASLNPNLQNI 689
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
E + I G +++ +++ADYSQIELRL+A S +
Sbjct: 690 PIRTE---RGQQIRGA---------------FRAEKGKKIISADYSQIELRLIAEISGEK 731
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
+I K D+ AA+ D V +R Q K + +GI+YG G L+EQ S
Sbjct: 732 NMIEAFQKGE-DIHASTAAKLFKIPIDEVNKTQRSQAKTVNFGIIYGQGAFALAEQTGLS 790
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
E+K+ I ++ ++P + W+ V + GYVE+L GRKR L I+ N +S A+
Sbjct: 791 RAESKQMIDAYFQTYPTMKEWMTAQVKKARELGYVETLLGRKRHLKDIQSNNFVVRSHAE 850
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
R AVN+ QGSAADIIKIAMI I + + ++LLQVHDEL+
Sbjct: 851 RNAVNAPIQGSAADIIKIAMIEI---------------SKKLKEENRATKMLLQVHDELI 895
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E ++ +L+ CME+A VPLLV++ VG W
Sbjct: 896 FEAPIEEVEAVTALITSCMENAVKTTVPLLVEVGVGDHW 934
>gi|30264657|ref|NP_847034.1| DNA polymerase I [Bacillus anthracis str. Ames]
gi|47778333|ref|YP_021476.2| DNA polymerase I [Bacillus anthracis str. 'Ames Ancestor']
gi|65321954|ref|ZP_00394913.1| COG0749: DNA polymerase I - 3'-5' exonuclease and polymerase domains
[Bacillus anthracis str. A2012]
gi|167633873|ref|ZP_02392196.1| DNA polymerase I [Bacillus anthracis str. A0442]
gi|167638243|ref|ZP_02396521.1| DNA polymerase I [Bacillus anthracis str. A0193]
gi|170685807|ref|ZP_02877030.1| DNA polymerase I [Bacillus anthracis str. A0465]
gi|170705559|ref|ZP_02896023.1| DNA polymerase I [Bacillus anthracis str. A0389]
gi|177651090|ref|ZP_02933921.1| DNA polymerase I [Bacillus anthracis str. A0174]
gi|190569033|ref|ZP_03021933.1| DNA polymerase I [Bacillus anthracis str. Tsiankovskii-I]
gi|196032762|ref|ZP_03100175.1| DNA polymerase I [Bacillus cereus W]
gi|218905814|ref|YP_002453648.1| DNA polymerase I [Bacillus cereus AH820]
gi|227817371|ref|YP_002817380.1| DNA polymerase I [Bacillus anthracis str. CDC 684]
gi|229603367|ref|YP_002868866.1| DNA polymerase I [Bacillus anthracis str. A0248]
gi|254687394|ref|ZP_05151250.1| DNA polymerase I [Bacillus anthracis str. CNEVA-9066]
gi|254724957|ref|ZP_05186740.1| DNA polymerase I [Bacillus anthracis str. A1055]
gi|254736694|ref|ZP_05194400.1| DNA polymerase I [Bacillus anthracis str. Western North America
USA6153]
gi|254741731|ref|ZP_05199418.1| DNA polymerase I [Bacillus anthracis str. Kruger B]
gi|254757503|ref|ZP_05209530.1| DNA polymerase I [Bacillus anthracis str. Australia 94]
gi|421509335|ref|ZP_15956242.1| DNA polymerase I [Bacillus anthracis str. UR-1]
gi|421639198|ref|ZP_16079791.1| DNA polymerase I [Bacillus anthracis str. BF1]
gi|30259332|gb|AAP28520.1| DNA-directed DNA polymerase [Bacillus anthracis str. Ames]
gi|47552038|gb|AAT33951.2| DNA polymerase I [Bacillus anthracis str. 'Ames Ancestor']
gi|167514060|gb|EDR89428.1| DNA polymerase I [Bacillus anthracis str. A0193]
gi|167530674|gb|EDR93376.1| DNA polymerase I [Bacillus anthracis str. A0442]
gi|170129684|gb|EDS98547.1| DNA polymerase I [Bacillus anthracis str. A0389]
gi|170670271|gb|EDT21011.1| DNA polymerase I [Bacillus anthracis str. A0465]
gi|172082916|gb|EDT67978.1| DNA polymerase I [Bacillus anthracis str. A0174]
gi|190559815|gb|EDV13800.1| DNA polymerase I [Bacillus anthracis str. Tsiankovskii-I]
gi|195994191|gb|EDX58146.1| DNA polymerase I [Bacillus cereus W]
gi|218539736|gb|ACK92134.1| DNA polymerase I [Bacillus cereus AH820]
gi|227005090|gb|ACP14833.1| DNA-directed DNA polymerase [Bacillus anthracis str. CDC 684]
gi|229267775|gb|ACQ49412.1| DNA polymerase I [Bacillus anthracis str. A0248]
gi|401820787|gb|EJT19950.1| DNA polymerase I [Bacillus anthracis str. UR-1]
gi|403393617|gb|EJY90860.1| DNA polymerase I [Bacillus anthracis str. BF1]
Length = 877
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELEKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDHHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E +++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEVEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|229032231|ref|ZP_04188204.1| DNA polymerase I [Bacillus cereus AH1271]
gi|228729011|gb|EEL80014.1| DNA polymerase I [Bacillus cereus AH1271]
Length = 891
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 252/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELQKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST L+ L
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLEKLMDR 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ + D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVDAFQRDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLKRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPQEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|429759698|ref|ZP_19292194.1| DNA-directed DNA polymerase [Veillonella atypica KON]
gi|429179288|gb|EKY20544.1| DNA-directed DNA polymerase [Veillonella atypica KON]
Length = 906
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 238/467 (50%), Gaps = 40/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
C V A+ V K L E L + NIE+PL++ L ME GI +D +
Sbjct: 477 CVSMVKALLAMDDVAVKALQDESLWDLYNNIELPLIHTLLVMEKNGIYIDPVKLEETTVK 536
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+ +L ++++ Y LAG F++ + + +L+ + LP+ + K K STD LD+
Sbjct: 537 FKAELEAVQQEIYELAGETFNINSPKQLGIILFEKMNLPVIK---KTKTGYSTDAEVLDM 593
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
LRHE PIV I +R++AKL++ + C + ++ + + +H + Q TATGRLS
Sbjct: 594 LRHESPIVEKILAYRSVAKLVS----TYCEGLAVLINPETHRIHTTFNQMVTATGRLSSS 649
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + E E+ R F P + L++ADYSQIELR++
Sbjct: 650 DPNLQNIPVRTE----------KGREI-------RALFYPGEGFDTLVSADYSQIELRIL 692
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D ALI + D+ AA G+S+D V S+ER K + +GI+YG+ L
Sbjct: 693 AHLSGDEALIKAFNDGK-DIHRFTAAEVLGKSQDEVTSEERSHAKAVNFGIIYGISDFGL 751
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S L + EAK I+ + S +P V ++ V H+ G V ++ GR R L I N
Sbjct: 752 SRDLGITRQEAKNYIELYFSRYPKVKEYMDNMVKEAHETGKVRTMFGRMRELPDINSRNF 811
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK+AM + SI+ +K RLLL
Sbjct: 812 NRRSFAERTAMNTPIQGTAADIIKLAMNKVESILEEKTFK---------------SRLLL 856
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
QVHDELVLEV + +L+++ MES L VPL+V + W
Sbjct: 857 QVHDELVLEVVNEELDAIQTLLKETMESIVELHVPLIVDVHNAENWA 903
>gi|284047822|ref|YP_003398161.1| DNA polymerase I [Acidaminococcus fermentans DSM 20731]
gi|283952043|gb|ADB46846.1| DNA polymerase I [Acidaminococcus fermentans DSM 20731]
Length = 872
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 243/461 (52%), Gaps = 44/461 (9%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
T AL VL + L L +IE+PL LA+ME GI VD + + KK++
Sbjct: 450 TAALVPVLREKLEERGLTRLYEDIELPLTENLAEMEFTGIAVDQAMLDEVTGEMTKKVQA 509
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
LE++A+ AG +F+L + + +L+ L LPI K K STD L+ L+ EHP+
Sbjct: 510 LEQQAWDQAGEQFNLNSPKQLGVLLFEKLGLPI---IKKTKTGYSTDVSVLEALQGEHPL 566
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
+ + +R L+KLL+ L + L I+ +T + +H H+ Q +T TGRLS EPNLQ +
Sbjct: 567 IETLISYRQLSKLLSTYLLGLHPL--INPATGR--IHTHFNQMATVTGRLSSTEPNLQNI 622
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
E R+ F+P + +L++ DYSQ+ELR+MA ++D
Sbjct: 623 PTRTE-----------------VGKRMREMFVPGEGYDLLMSCDYSQVELRVMASIAQDE 665
Query: 1955 ALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
L+ S HG DV A+ G D V R + K + +GI+YG+ L+ QL
Sbjct: 666 LLLD--SFRHGQDVHARTASEIFGVPLDQVTPYMRSKAKTVNFGIIYGISDFGLARQLGV 723
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA + I+S+ + + GV +++ + GYVE+L GR+R+L I N +S A
Sbjct: 724 PRGEAAQYIESYFARYTGVKAYMEREKQKAREMGYVETLFGRRRYLPDINAKNFNRRSFA 783
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK+AM+ + A N + + + R+LLQVHDEL
Sbjct: 784 ERTAINTPIQGTAADIIKVAMLKV---------------ARNLKEARVKSRVLLQVHDEL 828
Query: 2134 VLEVDPSVIKEAVS-LVQKCMESAALLLVPLLVKIQVGSTW 2173
VLE+ P+ +E V +V++ ME A L VPL+ + VG W
Sbjct: 829 VLEI-PAAEQETVGKIVKETMEHAVDLAVPLVADVAVGKNW 868
>gi|261418256|ref|YP_003251938.1| DNA polymerase I [Geobacillus sp. Y412MC61]
gi|319767784|ref|YP_004133285.1| DNA polymerase I [Geobacillus sp. Y412MC52]
gi|448239015|ref|YP_007403073.1| DNA polymerase I [Geobacillus sp. GHH01]
gi|261374713|gb|ACX77456.1| DNA polymerase I [Geobacillus sp. Y412MC61]
gi|317112650|gb|ADU95142.1| DNA polymerase I [Geobacillus sp. Y412MC52]
gi|445207857|gb|AGE23322.1| DNA polymerase I [Geobacillus sp. GHH01]
Length = 876
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 238/466 (51%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 447 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGEE 506
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++L +E++ Y LAG +F++ + + +L+ L+LP+ K K ST L+
Sbjct: 507 LAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV---LKKTKTGYSTSADVLEK 563
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 564 LAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSST 619
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 620 EPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRVL 662
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D L+ + D+ T A SED V R Q K + +GI+YG+ L
Sbjct: 663 AHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGL 721
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 722 AQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNF 781
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLLL
Sbjct: 782 NVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLLL 826
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE ++ LV + ME A L VPL V GSTW
Sbjct: 827 QVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTW 872
>gi|421096940|ref|ZP_15557639.1| DNA-directed DNA polymerase [Leptospira borgpetersenii str.
200901122]
gi|410800185|gb|EKS02246.1| DNA-directed DNA polymerase [Leptospira borgpetersenii str.
200901122]
Length = 917
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 166/528 (31%), Positives = 271/528 (51%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGRWKNQMRRAAHNGCCR 1710
D + S+++ P+ R N++ K L+ + + +G+ K ++
Sbjct: 430 FDTMLASYVIQPEGRRH---NMDALAKDLLNYDTITYDDLVGTGKKKKELTDIDPEQVAE 486
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + E +E +L NIE+PL++VLA ME GI +D+ +
Sbjct: 487 YAAEDADITFRLYQIFRKKIKESGVEPILRNIEMPLISVLAKMENTGIALDVPYFEELAR 546
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ LKL I + G STD L+
Sbjct: 547 DFDREIRHLESEIHRQAGRSFNIASTKELQKILFDDLKLKIVKKTQTGY---STDHEVLE 603
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPIV + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 604 ELLGEHPIVEKLLDYRKYTKLKSTYVDALPKM----VNPRTGRIHTSYNQTIAATGRLSS 659
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D G ++ + F + S E + +L+ DYSQIELR+
Sbjct: 660 TDPNLQNI--------PIRDREG--------RLLRKGFTVDSDE-YEILSLDYSQIELRI 702
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA++ + HG D+ AA G E V S+ RD+ K + + ++YG+ P
Sbjct: 703 MAHISKDPAMLEAYN--HGLDIHIRTAAALYGVPEKEVTSEMRDKAKVVNFSVIYGVTPY 760
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L +EAK I+ + + +PGV S++ V + GYV++L GR+R + I
Sbjct: 761 GLSRNLRIPRDEAKSFIERYMAQYPGVKSYMESMVEFAEKNGYVQTLTGRRRPIVDINST 820
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 821 HKSAKEAAKRVAINSPVQGTSADMIKIAMIRIHEDIEKKHYK---------------SRM 865
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV +E + ++K ME+A L +P+LV+ + G W
Sbjct: 866 LLQVHDELVFEVHKKEKEEFKTSMKKHMENAMPLDLPILVEGKFGVNW 913
>gi|188993608|ref|YP_001905618.1| DNA polymerase I [Xanthomonas campestris pv. campestris str. B100]
gi|167735368|emb|CAP53582.1| DNA-directed DNA polymerase [Xanthomonas campestris pv. campestris]
Length = 927
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 191/683 (27%), Positives = 306/683 (44%), Gaps = 104/683 (15%)
Query: 1498 FDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHR 1557
D ++ R A +F FD D + ++ GL+V E Y+ D
Sbjct: 338 LDSWIARLRAAGQFAFDTETDSLDALQANLI----GLSVAAEPGQAAYLPFGHDFPGAPA 393
Query: 1558 RKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAV 1617
+ DR Q ++ ++ VRK + K + V++ +
Sbjct: 394 QLDR---------------------TQALAQLAPLLTDPAVRKLGQHGKYDLHVMRRHGI 432
Query: 1618 SIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKE 1677
++ + D + S++L + S+ +++
Sbjct: 433 ALAGYAD-----------------------------DTLLESFVL---NSGSARHDMDSL 460
Query: 1678 VKKRLSSEAAAAANRSGRWKNQMRRA--AHNGCCRRVAQ----TRALCSVLWKLLVSEEL 1731
K+ L + + G+ Q++ A + R A+ T L VL K L +E
Sbjct: 461 AKRYLGYDTVKYEDICGKGAKQIKFAQVSLEDATRYAAEDADITLRLHQVLGKRLAAEPA 520
Query: 1732 IEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
+E++ +IE+PLV VL +E G+ VD + L K++ ++KA LAG F+L
Sbjct: 521 LESVYRDIEMPLVGVLERIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLD 580
Query: 1791 TAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNC 1850
+ + +L+ LKLP KG+ PST++ L+ + +H + VI ++R+LAKL +
Sbjct: 581 SPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHELPRVILDYRSLAKLRST 638
Query: 1851 TLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGG 1910
+ + + Q +H + Q ATGRLS +PNLQ + E
Sbjct: 639 YTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQNIPIRTE----------- 683
Query: 1911 NAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
D +I R F P+ L+A DYSQIELR+MAH S DP L+G DV
Sbjct: 684 ----DGRRIR-RAFVAPAGRK--LIACDYSQIELRIMAHLSGDPGLVGAFES-GADVHRA 735
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFP 2030
AA GR+ D+V ER K + +G++YGM L+ QL EA++ I + S +P
Sbjct: 736 TAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGIGRGEAQDYIALYFSRYP 795
Query: 2031 GVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADII 2090
GV ++ KGYVE++ GR+ +L I G+ +++ A+R A+N+ QG+AADII
Sbjct: 796 GVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGAERAAINAPMQGTAADII 855
Query: 2091 KIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQ 2150
K AM+++ D +A + Q R ++LQVHDELV E D + ++ V
Sbjct: 856 KRAMVSV-----------DGWIADHAQ----RALMILQVHDELVFEADADFVDTLLAEVT 900
Query: 2151 KCMESAALLLVPLLVKIQVGSTW 2173
M +AA L VPL+V VG W
Sbjct: 901 ARMSAAASLRVPLVVDSGVGDNW 923
>gi|421075531|ref|ZP_15536544.1| DNA polymerase I [Pelosinus fermentans JBW45]
gi|392526529|gb|EIW49642.1| DNA polymerase I [Pelosinus fermentans JBW45]
Length = 874
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 163/458 (35%), Positives = 244/458 (53%), Gaps = 42/458 (9%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL-LQKKLRYLE 1776
+ +L + L+ ELI IE+PLV VL+ +E GI VD E LQ ++ + K+ L
Sbjct: 455 IYPILKQGLIDNELIHLFNEIELPLVEVLSIVENHGIKVDRE-YLQIMSVEIGAKIELLL 513
Query: 1777 KKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVP 1836
K Y AG F++ + + +L+ L LP+ K K STD L+ L +H IV
Sbjct: 514 TKIYQCAGETFNVNSPKQLGVILFEKLNLPV---MKKTKTGYSTDAEVLEKLAGQHAIVD 570
Query: 1837 VIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEH 1896
I E+R LAKL + L + L IS +T + +H + Q TATGRLS EPNLQ +
Sbjct: 571 TILEYRMLAKLKSTYLDGMVDL--ISPATGR--IHTTFNQMVTATGRLSSSEPNLQNIPI 626
Query: 1897 MVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPAL 1956
E R+ FIP L++ADYSQIELR++A S D L
Sbjct: 627 RTEIGK-----------------KIRELFIPGAGYDYLMSADYSQIELRVLADMSGDANL 669
Query: 1957 IGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSN 2016
I +K DV T AA + V S+ R + K + +GI+YG+ LS + S
Sbjct: 670 IESFAKEQ-DVHTRTAAEVFEVPMEEVTSELRSRAKAVNFGIVYGISDYGLSRDIGVSRK 728
Query: 2017 EAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQ 2076
EA + I+++ + + GV +++ AV + HQ+GYV +L GR+R+L I N ++S A+R
Sbjct: 729 EASQYIENYFTKYNGVKAFMDKAVGAAHQQGYVTTLLGRRRYLPDINSKNFNQRSFAERT 788
Query: 2077 AVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLE 2136
A+N+ QG+AADIIK AM++++ + Q K + R+LLQVHDELVLE
Sbjct: 789 AMNTPIQGTAADIIKKAMVDVYRAL---------------QKEKLQSRILLQVHDELVLE 833
Query: 2137 VDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
V +++ +V++ ME + +L VPL+V +++G W
Sbjct: 834 VPIGEVEQVSKIVKEAMEQSVMLKVPLVVDVKIGKNWA 871
>gi|305665261|ref|YP_003861548.1| DNA polymerase I [Maribacter sp. HTCC2170]
gi|88710015|gb|EAR02247.1| DNA polymerase I [Maribacter sp. HTCC2170]
Length = 944
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 235/448 (52%), Gaps = 39/448 (8%)
Query: 1727 VSEELIEALLN-IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
++E E L N IEIPL++VLADMEL GI +D E L ++ L+ K Y A
Sbjct: 531 LAEASTEELFNTIEIPLLHVLADMELEGINLDKEFLGSLSEDLNNDIKELQSKIYKEADQ 590
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLA 1845
+F++ + + +L+ LKL K Q+ ST + L L +H I+ + E+R L+
Sbjct: 591 EFNIASPKQLGEILFDKLKLVDKPKKTKTGQY-STAEDVLSYLAKDHEIIRNVLEYRGLS 649
Query: 1846 KLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNE 1905
KL + + ++ + + + +H ++QT ATGRLS PNLQ + E
Sbjct: 650 KLKSTYVDALP----LQVEERTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQ-- 703
Query: 1906 DIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG 1965
R F+P E++ LLAADYSQIELR++A S++ +I K
Sbjct: 704 ---------------VRKAFVPRDEDYTLLAADYSQIELRIIAALSEEDTMIEAF-KNGE 747
Query: 1966 DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSF 2025
D+ A++ D V ++R K + +GI+YG+ LS Q + S EAKE I+++
Sbjct: 748 DIHASTASKVFDVPLDEVTREQRSNAKTVNFGIIYGVSAFGLSNQTDLSRTEAKELIETY 807
Query: 2026 KSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGS 2085
++P + +++ + GYV+++ GR+R+L I N + A+R AVN+ QGS
Sbjct: 808 YKTYPKLRNYMSEQIDFARDNGYVQTVLGRRRYLKDINGSNAIVRGAAERNAVNAPIQGS 867
Query: 2086 AADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEA 2145
AADIIKIAMINIH + G YK ++LLQVHDELV +V + ++E
Sbjct: 868 AADIIKIAMINIHKKLSEGNYK---------------TKMLLQVHDELVFDVHKAELEEL 912
Query: 2146 VSLVQKCMESAALLLVPLLVKIQVGSTW 2173
SL+Q ME+A L VPL V++ +G W
Sbjct: 913 KSLIQSEMENAYKLAVPLDVELGLGDNW 940
>gi|381211869|ref|ZP_09918940.1| DNA polymerase I [Lentibacillus sp. Grbi]
Length = 879
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 273/541 (50%), Gaps = 57/541 (10%)
Query: 1642 LLLSPVHLKDGI--DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQ 1699
LL +H+K GI DM + S++L P + P + RL + +
Sbjct: 383 LLNKDIHIK-GITFDMLLSSYLLNPAENNHDIP----AIAHRLGATDVLFDEEVYGKGAK 437
Query: 1700 MRRAAHNGCCRRVAQTRALCSVLWKL-------LVSEELIEALLNIEIPLVNVLADMELW 1752
M+ + VA+ +VL+++ L S E E L +E+PL +L +ME
Sbjct: 438 MQVPEQDKLSEHVARK---ANVLFQIKDDMKEQLKSNEQYELLKELEMPLALILGEMEHT 494
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
G+ VD+E + + L+++L LE++ Y LAG +F+L + + +L+ L LP+ +
Sbjct: 495 GVLVDVERIREMGDDLKQRLSDLEREIYELAGEEFNLNSPKQLGPILFEKLGLPVIK--- 551
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L++EH I+P + +R L KL + + + + + + +H
Sbjct: 552 KTKTGYSTAADVLEQLQNEHEIIPKLLLYRQLGKLQSTYIAGLLKV----VDQDNHKIHT 607
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+ Q T TGRLS +PNLQ + +E + KI R F+PS+++W
Sbjct: 608 RYNQALTQTGRLSSVDPNLQNIPIRLE---------------EGRKI--RQAFVPSRKDW 650
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTK 1992
++ AADYSQIELR++AH + D L+ + + D+ T A + V S R Q K
Sbjct: 651 VMFAADYSQIELRVLAHIAGDEKLVEAFTN-NLDIHTQTAMDVFHVEREEVTSNMRRQAK 709
Query: 1993 RLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESL 2052
+ +GI+YG+ LS+ L + EAK+ I+ + S+P V +++ V +GYV ++
Sbjct: 710 AVNFGIVYGISDYGLSQSLGITRKEAKQFIERYFDSYPDVKAYMDDIVQEAKHQGYVTTI 769
Query: 2053 KGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSL 2112
R+R+L +I N +S A+R A+N+ QGSAADIIK AMI++H + D L
Sbjct: 770 MNRRRYLPEITSRNFNRRSFAERTAMNTPIQGSAADIIKKAMIDLHEKL------KDEKL 823
Query: 2113 AANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGST 2172
A R+LLQVHDEL+LE IK+ +V ME+ L VPL V + G +
Sbjct: 824 EA---------RMLLQVHDELILEAPKEEIKQLKEIVPAVMENTVDLNVPLKVDYEYGDS 874
Query: 2173 W 2173
W
Sbjct: 875 W 875
>gi|317154192|ref|YP_004122240.1| DNA polymerase I [Desulfovibrio aespoeensis Aspo-2]
gi|316944443|gb|ADU63494.1| DNA polymerase I [Desulfovibrio aespoeensis Aspo-2]
Length = 887
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 231/447 (51%), Gaps = 41/447 (9%)
Query: 1728 SEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKF 1787
S L + ++EIPL+ VL ME GIGVD++ + + +L L + AG F
Sbjct: 479 SAHLSTLMRDLEIPLIPVLVSMEQAGIGVDLDAFAGFLDDVSTQLDELTRSIIRHAGEPF 538
Query: 1788 SLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKL 1847
++ ++ +A +L+ KL I EG+ ST L+ +R HPIV I E+R L KL
Sbjct: 539 NIRSSQQLAAILFD--KLDIKEGNKTATGQRSTANQVLEAIRSRHPIVEDILEYRMLEKL 596
Query: 1848 LNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDI 1907
+ L + L + LH H+ Q +TATGRLS +PNLQ N I
Sbjct: 597 RSTYLEPLPKLV-----GEDSRLHTHFNQLATATGRLSSSQPNLQ-----------NIPI 640
Query: 1908 YGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDV 1967
G + R FI + +L AADYSQIELR++AHFS DPALI D+
Sbjct: 641 RGKHGP------RMRACFI-AGPGAMLAAADYSQIELRVLAHFSGDPALIDAFRNDE-DI 692
Query: 1968 FTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKS 2027
T AA T + V + ER K + +G++YGMGP L+ +L+ + N+AKE I+ +
Sbjct: 693 HTRTAALLTDKQPQDVLADERRNAKTINFGLIYGMGPQKLARELDITVNQAKEFIERYFD 752
Query: 2028 SFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAA 2087
+ ++ V G+V +L GR+R L ++ N + S+A+RQAVN++ QGSAA
Sbjct: 753 KLATLKAYYDTIVKDAESHGFVTTLAGRRRLLPELHSRNTQLVSQARRQAVNTVIQGSAA 812
Query: 2088 DIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVS 2147
DIIK+AM+ H D LAA ++LQVHDEL++E + I+ A
Sbjct: 813 DIIKMAMVAAHK---------DKDLAAL------GAHVILQVHDELIIEAPEASIRPAGE 857
Query: 2148 LVQKCMESAALLLVPLLVKIQVGSTWG 2174
++ M+S A L VPL V + +G TW
Sbjct: 858 RLKTIMQSVADLAVPLKVDLGLGRTWA 884
>gi|2231821|gb|AAB62092.1| DNA polymerase I [Geobacillus stearothermophilus]
Length = 877
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 265/545 (48%), Gaps = 61/545 (11%)
Query: 1633 GLENVGSSFLLLSPVHL----KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA 1688
G++ G +F LL +L +D D+ V+ + + RS K VK+ L E
Sbjct: 386 GIDVRGVAFDLLLAAYLLNPAQDAGDIAAVAKMKQYEAVRSDEAVYGKGVKRSLPDEQTL 445
Query: 1689 AANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLAD 1748
A + R+ A AL L + E + L +E PL +LA+
Sbjct: 446 AEH----------------LVRKAAAIWALEQPFMDDLRNNEQDQLLTKLEQPLAAILAE 489
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIP 1808
ME G+ VD + Q + L ++LR +E++ Y AG +F++ + + +L+ L+LP+
Sbjct: 490 MEFTGVNVDTKRLEQMGSELAEQLRAIEQRIYEHAGQEFNINSPKQLGVILFEKLQLPV- 548
Query: 1809 EGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKY 1868
K K ST L+ L H IV I +R L KL + + + + R
Sbjct: 549 --LKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTGK--- 603
Query: 1869 TLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+H + QT T TGRLS EPNLQ + +E + KI R F+PS
Sbjct: 604 -VHTMFNQTLTQTGRLSSAEPNLQNIPIRLE---------------EGRKI--RQAFVPS 645
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
+ +W++ AADYSQIELR++AH + D LI + D+ T A SE+ V + R
Sbjct: 646 EPDWLIFAADYSQIELRVLAHIADDDNLIEAFQR-DLDIHTKTAMDIFHVSEEEVTANMR 704
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K + +GI+YG+ L++ LN + EA E I+ + +SFPGV ++ V QKGY
Sbjct: 705 RQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVRRYMENIVQEAKQKGY 764
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
V +L R+R+L I N +S A+R A+N+ QGSAADIIK AMI+
Sbjct: 765 VTTLLHRRRYLPDITSRNFNVRSFAERTAMNTPIQGSAADIIKKAMID------------ 812
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
LAA + + + RLLLQVHDEL+LE I+ LV + ME A+ VPL V
Sbjct: 813 ---LAARLKEEQLQARLLLQVHDELILEAPKEEIERLCELVPEVMEQ-AVSSVPLKVDYH 868
Query: 2169 VGSTW 2173
G TW
Sbjct: 869 YGPTW 873
>gi|387121098|ref|YP_006286981.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D7S-1]
gi|385875590|gb|AFI87149.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 933
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 275/551 (49%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L + +
Sbjct: 424 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTISF 479
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPL 1742
+ +G+ KNQ+ A T L VLW+ L + + AL +IE+PL
Sbjct: 480 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWEKLEPQPGLVALYQSIELPL 539
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
++VL+ ME G+ +D + N + ++L LE +AY LAG F+L + + +L+G
Sbjct: 540 LSVLSRMERCGVLIDSDALFLQSNEITERLTALEMQAYALAGQPFNLASTKQLQEILFGK 599
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 600 LGLPVLQKTPKGA--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 653
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE R
Sbjct: 654 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------AGRRIR 696
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 697 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 754
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM +L S +A+ + + +P V +++H
Sbjct: 755 VTSEQRRNAKAINFGLIYGMSSFVFPARLGISRADAQRYMDLYFQRYPNVQTFIHDIREK 814
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + +R A+N+ QG+AADIIK AMI +
Sbjct: 815 AKAQGYVETLFGRRLYLPEINSSNAMRRKGTERVAINAPMQGTAADIIKRAMIKLD---- 870
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
G+ + D + +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 871 -GITRDDPDI-----------HMIMQVHDELVFEVRSEKIAFFSDLIKQHMEAAAELVVP 918
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 919 LIVDVGVGENW 929
>gi|303232052|ref|ZP_07318755.1| DNA-directed DNA polymerase [Veillonella atypica ACS-049-V-Sch6]
gi|302513158|gb|EFL55197.1| DNA-directed DNA polymerase [Veillonella atypica ACS-049-V-Sch6]
Length = 884
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 238/467 (50%), Gaps = 40/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
C V A+ K L E L + NIE+PL++ L ME GI +D +
Sbjct: 455 CVSMVKALLAMDDAAVKALQDESLWDLYNNIELPLIHTLLVMEKNGIYIDPVKLEETTIK 514
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+ +L ++++ Y LAG F++ + + +L+ + LP+ + K K STD LD+
Sbjct: 515 FKAELEAVQQEIYELAGETFNINSPKQLGIILFEKMNLPVIK---KTKTGYSTDAEVLDM 571
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
LRHE PIV I +R++AKL++ + C + ++ + + +H + Q TATGRLS
Sbjct: 572 LRHESPIVEKILAYRSVAKLVS----TYCEGLAVLINPETHRIHTTFNQMVTATGRLSSS 627
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + E E+ R F P + L++ADYSQIELR++
Sbjct: 628 DPNLQNIPVRTE----------KGREI-------RALFYPGEGFDTLVSADYSQIELRIL 670
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D ALI + D+ AA G+S+D V S+ER K + +GI+YG+ L
Sbjct: 671 AHLSGDEALIKAFNDGK-DIHRFTAAEVLGKSQDEVTSEERSHAKAVNFGIIYGISDFGL 729
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S L + EAK I+ + S +P V ++ V+ H+ G V ++ GR R L I N
Sbjct: 730 SRDLGITRQEAKNYIELYFSRYPKVKEYMDNMVTEAHETGKVRTMFGRMRELPDINSRNF 789
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK+AM + SI+ +K RLLL
Sbjct: 790 NRRSFAERTAMNTPIQGTAADIIKLAMNKVESILEEKTFK---------------SRLLL 834
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
QVHDELVLEV + +L+++ MES L VPL+V + W
Sbjct: 835 QVHDELVLEVVNEELDAIQTLLKETMESIVELHVPLIVDVHNAENWA 881
>gi|397691563|ref|YP_006528817.1| DNA polymerase I [Melioribacter roseus P3M]
gi|395813055|gb|AFN75804.1| DNA polymerase I [Melioribacter roseus P3M]
Length = 927
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 240/469 (51%), Gaps = 46/469 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
C T L +L +L E+L + IE PLV VL DME G+ +D+E +
Sbjct: 498 SCEDADITFRLYRILDDILKKEKLEKVAYEIEFPLVPVLEDMERTGVKIDVESLNEFSKE 557
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L+ KL+ + K+ ++ + +F++ + + VL+ LKLP K K STD L+
Sbjct: 558 LEIKLQSISKEIFSYSEEEFNINSTQQLQKVLFDKLKLP---QTTKTKTGYSTDAKSLES 614
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
LR HPI+ +I E+R +AKL + S+ +L I+ T K +H + QT +TGRLS
Sbjct: 615 LRGSHPIIELILEYRQIAKLKSTYADSLPNL--INPKTGK--IHTTYNQTVVSTGRLSSN 670
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + + + E R FIPS + I+L+ADYSQIELR+M
Sbjct: 671 DPNLQNIP--IRSDLGKE---------------IRKAFIPSSDGNIILSADYSQIELRIM 713
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
A S D LI + D+ AA + + V + R + K + +GILYG+GP L
Sbjct: 714 ASISGDENLIAAFEQGE-DIHRRTAAMVFKVAPEEVTADMRRKAKEVNFGILYGLGPFGL 772
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
+L S AKE +++ +SF V ++ ++ QKGY E+L GR+R+L I N
Sbjct: 773 KNRLGISQAHAKEIFENYFNSFKKVKQFMDESIEKARQKGYAETLTGRRRYLKNINSKNR 832
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR---CR 2124
+ +R A+N QG+AAD+IK+AMI I F+ L R +
Sbjct: 833 TIRQFEERVAINMPIQGTAADMIKLAMIKI------------------FKELNDRNSKTK 874
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++LQVHDELV ++ + E +++ ME+A L VP++V I GS W
Sbjct: 875 MILQVHDELVFDMPKKELTELKPVIKNLMETAMPLNVPIVVDIGAGSNW 923
>gi|239828008|ref|YP_002950632.1| DNA polymerase I [Geobacillus sp. WCH70]
gi|239808301|gb|ACS25366.1| DNA polymerase I [Geobacillus sp. WCH70]
Length = 878
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 259/523 (49%), Gaps = 44/523 (8%)
Query: 1653 IDMCIVSWILWPDD--ERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D+ I S++L P E ++ K+ S EA + ++ A H R
Sbjct: 394 FDLLIASYLLNPSQSTEDVASIAKTKQYTDVQSDEAIYGKGAKQKIPDEPVLAEH--LVR 451
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+ A RAL L E ++E+PL ++LA+ME G+ +D++ + L +
Sbjct: 452 KAAAIRALEQDFICDLQENEQYSLFTDLELPLSSILAEMEFTGVKIDVKRLKEMGEELTE 511
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+L+ +E++ Y LAG +F++ + + +L+ L+LP+ + K K ST L+ L
Sbjct: 512 QLKEIEQEIYELAGQEFNINSPKQLGVILFEKLQLPVLK---KTKTGYSTSAEVLEKLAP 568
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
+H IV I +R L KL + + + + + T K +H + Q T TGRLS EPN
Sbjct: 569 QHEIVEKILHYRQLGKLQSTYIEGLLKV--VHHDTNK--VHTIFNQALTQTGRLSSTEPN 624
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + +E + KI R F+PS+ +W++ +ADYSQIELR++AH
Sbjct: 625 LQNIPIRLE---------------EGRKI--RQAFVPSEPDWVIFSADYSQIELRVLAHI 667
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
+ D LI + D+ T A +ED V R Q K + +GI+YG+ LS+
Sbjct: 668 ANDENLIDAF-RHDLDIHTKTAMDIFHVNEDEVTPNMRRQAKAVNFGIVYGISDYGLSQN 726
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
LN + EA E IK + FPGV ++ V QKGYV +L R+R+L I N +
Sbjct: 727 LNITRKEASEFIKRYFEIFPGVKQYMKDIVQEAKQKGYVTTLLHRRRYLPDITSRNFNLR 786
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
S A+R A+N+ QGSAADIIK AMI+ L+ + + R+LLQVH
Sbjct: 787 SFAERTAMNTPIQGSAADIIKKAMID---------------LSNRLKKENMKARMLLQVH 831
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+LE ++ +V + ME+A L VPL V G TW
Sbjct: 832 DELILEAPKEEVERLQQIVPEVMENAVQLRVPLKVDYHFGPTW 874
>gi|308174603|ref|YP_003921308.1| DNA polymerase I [Bacillus amyloliquefaciens DSM 7]
gi|384160438|ref|YP_005542511.1| DNA polymerase I [Bacillus amyloliquefaciens TA208]
gi|384165377|ref|YP_005546756.1| DNA polymerase I [Bacillus amyloliquefaciens LL3]
gi|384169519|ref|YP_005550897.1| DNA polymerase I [Bacillus amyloliquefaciens XH7]
gi|307607467|emb|CBI43838.1| DNA polymerase I [Bacillus amyloliquefaciens DSM 7]
gi|328554526|gb|AEB25018.1| DNA polymerase I [Bacillus amyloliquefaciens TA208]
gi|328912932|gb|AEB64528.1| DNA polymerase I [Bacillus amyloliquefaciens LL3]
gi|341828798|gb|AEK90049.1| DNA polymerase I [Bacillus amyloliquefaciens XH7]
Length = 879
Score = 237 bits (605), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 254/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++I+ P + ++ KE + S+ A + + + + R+
Sbjct: 395 FDALLAAYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKHAVPAEKELADHLARKA 454
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
A +L L L +E ++E+PL +L +ME G+ VD+E + L+ KL
Sbjct: 455 AAVNSLRDKLLHALKENNQLELYEDLELPLALILGEMESMGVKVDVERLKRMGEELRAKL 514
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ E+K + +AG F++ + + +L+ L LP+ + K K ST L+ L +H
Sbjct: 515 KEYEEKIHDIAGEPFNINSPKQLGVILFDKLGLPVVK---KTKTGYSTSADVLEKLADKH 571
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I ++R + KL + + + + R + +H + Q T TGRLS +PNLQ
Sbjct: 572 DIVAYILQYRQIGKLQSTYIEGLLKVTR----KDSHKVHTRFNQALTQTGRLSSTDPNLQ 627
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ AADYSQIELR++AH SK
Sbjct: 628 NIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHISK 670
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A SED V R Q K + +GI+YG+ LS+ L
Sbjct: 671 DENLIEAFTNDM-DIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGISDYGLSQNLG 729
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + SFPGV +++ +V QKGYV +L R+R++ ++ N +S
Sbjct: 730 ITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSF 789
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +AA + + RLLLQVHDE
Sbjct: 790 AERTAMNTPIQGSAADIIKKAMID---------------MAAELKEKNLKARLLLQVHDE 834
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ E IK LV + ME A L VPL G +W
Sbjct: 835 LIFEAPKEEIKILEKLVPEVMEHALDLDVPLKADYASGPSW 875
>gi|4090935|gb|AAC98908.1| DNA polymerase type I [Rhodothermus sp. 'ITI 518']
Length = 924
Score = 237 bits (605), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 198/663 (29%), Positives = 301/663 (45%), Gaps = 107/663 (16%)
Query: 1518 DKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEH 1577
D + + + + G+A WE YYV P L G+ + VL
Sbjct: 358 DTETTSTEAMWASLVGIAFSWEKGQGYYVPTP-------------LPDGTPTETVL---- 400
Query: 1578 QLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENV 1637
+R+ I+ +R RK N+K + VL V +
Sbjct: 401 ---------ERLAPIL-RRAQRKVGQNLKYDLVVLAQHGVEV------------------ 432
Query: 1638 GSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGR 1695
P + D + +++ P++ NL+ ++ L + A SGR
Sbjct: 433 -------PPPYF----DTMVAHYLIAPEEPH----NLDVLARQYLRYQMVAITELIGSGR 477
Query: 1696 WKNQMRRAAHNG----CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMEL 1751
+ MR + + C L VL L L +E PL+ VLADME
Sbjct: 478 DQKSMRDVSIDEVGPYACEDTDIALQLADVLAAELDRHGLRHIAEEMEFPLIEVLADMER 537
Query: 1752 WGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGH 1811
GI +D + L+ +L LE K Y +AG++F++ + +A+VL+ L L
Sbjct: 538 TGICIDRTVLREIGKQLEAELHELEAKIYEVAGVEFNIGSPQQLADVLFKKLGLKPRART 597
Query: 1812 NKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLH 1871
+ G+ PST + L L +HP+ +I + R LAKL + + + L + + +H
Sbjct: 598 STGR--PSTKESVLQELATQHPLPGLILDWRHLAKLKSTYVDGLEPL----IHPETGRIH 651
Query: 1872 GHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQEN 1931
+ QT TATGRLS PNLQ + V +M E R F+P +
Sbjct: 652 TTFNQTVTATGRLSSSNPNLQNIP--VRTEMGRE---------------IRRAFVP-RPG 693
Query: 1932 WILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQT 1991
W LL+ADY QIELR++A S D AL + D+ T AAR + V ++R +
Sbjct: 694 WKLLSADYVQIELRILAALSGDEALRRAFLEGQ-DIHTATAARVFKVPPEQVTPEQRRRA 752
Query: 1992 KRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVES 2051
K + YGI YG+ L+++L CS+ EA+E I+ ++ +FPGV +LH V QKGYVE+
Sbjct: 753 KMVNYGIPYGISAWGLAQRLRCSTREAQELIEEYQRAFPGVTRYLHRVVEKARQKGYVET 812
Query: 2052 LKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSS 2111
L GR+R++ I N E+S A+R AVN QG+ AD+IK+AM++I+
Sbjct: 813 LLGRRRYVPNINSRNRAERSMAERIAVNMPIQGTQADMIKLAMVHIYH------------ 860
Query: 2112 LAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLL-VPLLVKIQVG 2170
Q R ++LLQVHDELV E+ P ++ LV++ M+ A VP+ V I VG
Sbjct: 861 ---RLQREGYRAKMLLQVHDELVFEMPPEEVEPVRQLVEQEMKQALPREGVPIEVDIGVG 917
Query: 2171 STW 2173
W
Sbjct: 918 DNW 920
>gi|21233442|ref|NP_639359.1| DNA polymerase I [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66770406|ref|YP_245168.1| DNA polymerase I [Xanthomonas campestris pv. campestris str. 8004]
gi|21115286|gb|AAM43241.1| DNA polymerase I [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66575738|gb|AAY51148.1| DNA polymerase I [Xanthomonas campestris pv. campestris str. 8004]
Length = 927
Score = 237 bits (605), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 196/707 (27%), Positives = 311/707 (43%), Gaps = 110/707 (15%)
Query: 1474 DPCLVNKDRACNKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHG 1533
DP L G I D ++ R A +F FD D + ++ G
Sbjct: 320 DPAL------SAPGQYETILTQAQLDSWIARLRAAGQFAFDTETDSLDALQANLI----G 369
Query: 1534 LAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIM 1593
L+V E Y+ D + DR Q ++ ++
Sbjct: 370 LSVAAEPGQAAYLPFGHDFPGAPAQLDR---------------------TQALAQLAPLL 408
Query: 1594 EKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGI 1653
VRK + K + V++ +++ +
Sbjct: 409 TDPAVRKLGQHGKYDLHVMRRHGIALAGYAD----------------------------- 439
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRA--AHNGCCRR 1711
D + S++L + S+ +++ K+ L + + G+ Q++ A + R
Sbjct: 440 DTLLESFVL---NSGSARHDMDSLAKRYLGYDTVKYEDICGKGAKQIKFAQVSLEDATRY 496
Query: 1712 VAQ----TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ T L VL K L +E +E++ +IE+PLV VL +E G+ VD +
Sbjct: 497 AAEDADITLRLHQVLGKRLAAEPALESVYRDIEMPLVGVLERIEANGVCVDAAELRRQSA 556
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
L K++ ++KA LAG F+L + + +L+ LKLP KG+ PST++ L+
Sbjct: 557 DLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALE 614
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
+ +H + VI ++R+LAKL + + + + Q +H + Q ATGRLS
Sbjct: 615 AIADQHELPRVILDYRSLAKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSS 670
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + E D +I R F P+ L+A DYSQIELR+
Sbjct: 671 SDPNLQNIPIRTE---------------DGRRIR-RAFVAPAGRK--LIACDYSQIELRI 712
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
MAH S DP L+G DV AA GR+ D+V ER K + +G++YGM
Sbjct: 713 MAHLSGDPGLVGAFES-GADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFG 771
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
L+ QL EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+
Sbjct: 772 LARQLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGS 831
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
+++ A+R A+N+ QG+AADIIK AM+++ D +A + Q R ++
Sbjct: 832 QGQRAGAERAAINAPMQGTAADIIKRAMVSV-----------DGWIADHAQ----RALMI 876
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LQVHDELV E D + ++ V M +AA L VPL+V VG W
Sbjct: 877 LQVHDELVFEADADFVDTLLAEVTARMSAAASLRVPLVVDSGVGDNW 923
>gi|345100617|pdb|2Y1I|A Chain A, Crystal Structure Of A S-Diastereomer Analogue Of The Spore
Photoproduct In Complex With Fragment Dna Polymerase I
From Bacillus Stearothermophilus
gi|345100620|pdb|2Y1J|A Chain A, Crystal Structure Of A R-Diastereomer Analogue Of The Spore
Photoproduct In Complex With Fragment Dna Polymerase I
From Bacillus Stearothermophilus
Length = 580
Score = 237 bits (605), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 238/466 (51%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L E L+ +E PL ++LA+ME G+ VD + Q
Sbjct: 151 LVRKAAAIWALERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKE 210
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++LR +E++ Y LAG +F++ + + +L+ L+LP+ K K ST L+
Sbjct: 211 LAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV---LKKTKTGYSTSADVLEK 267
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + R T+K +H + Q T TGRLS
Sbjct: 268 LAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR--PDTKK--VHTIFNQALTQTGRLSST 323
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 324 EPNLQNIPIRLE---------------EGRKI--RQAFVPSESDWLIFAADYSQIELRVL 366
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D L+ + D+ T A SED V R Q K + GI+YG+ L
Sbjct: 367 AHIAEDDNLMEAFRR-DLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNKGIVYGISDYGL 425
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN S EA E I+ + SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 426 AQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNF 485
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+++ A + + + RLLL
Sbjct: 486 NVRSFAERMAMNTPIQGSAADIIKKAMIDLN---------------ARLKEERLQARLLL 530
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE ++ LV + ME A L VPL V GSTW
Sbjct: 531 QVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTW 576
>gi|428221824|ref|YP_007105994.1| DNA polymerase I [Synechococcus sp. PCC 7502]
gi|427995164|gb|AFY73859.1| DNA polymerase I [Synechococcus sp. PCC 7502]
Length = 945
Score = 237 bits (604), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 263/525 (50%), Gaps = 50/525 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRA---AHNGCC 1709
D I S+++ PD +N L + K+ L + G+ K+ + N C
Sbjct: 463 FDTMIASYVIDPD----ANHGLSELSKRYLQITPQSYKELLGKHKSIAEISIPQVANYCG 518
Query: 1710 RRVAQTRALCSVLWKLLVS-EELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
T + L + LVS EL +E+PL VLA+ME GI VD E Q L
Sbjct: 519 MDAYSTWQIMPFLKQQLVSVPELSNLYYQVELPLEIVLAEMEWLGIRVDREYLQQFSQEL 578
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
+ L + K AY G +F+L + ++ +L L + K STD L+ L
Sbjct: 579 EIDLDAIAKSAYKQVGKEFNLNSPKQLSEILIEKLGETFTKKSRKSSTGYSTDVAVLNKL 638
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
+ + P++ I E+RTLAKL + + ++ +L I TQ+ +H + QT T+TGRLS
Sbjct: 639 QGDDPLIDTILENRTLAKLKSTYVDALPAL--IHPQTQR--VHTDFNQTVTSTGRLSSSN 694
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + F R F+P + W++LAADYSQIELR++A
Sbjct: 695 PNLQNIPIKTAFSR-----------------RIRSGFLP-ESGWLMLAADYSQIELRILA 736
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H S++P L+ ++ DV T A + D V S+ER K + YG++YGMG S
Sbjct: 737 HLSQEPELVKAYNQ-GIDVHTRTAQLLLEK--DEVTSEERRLAKIINYGVIYGMGAQKFS 793
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
+ +++AK+ I++F + + +++ +G+V ++ GR+R+ ++K+ +
Sbjct: 794 RETGIPASQAKKFIEAFNKQYAQIFTYMKTVEQEAETQGFVTTVLGRRRYFHELKYTSGY 853
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+K+ R AVN+ QG++ADIIK+AMI +H ++ N+ R RLLLQ
Sbjct: 854 QKAAMLRSAVNAPIQGTSADIIKVAMIGLHKLL------------KNY-----RSRLLLQ 896
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VHDELVLE+ P + E ++ MESA L VPL+V I +G W
Sbjct: 897 VHDELVLEILPEELTELQPQIKSVMESAIPLSVPLVVDIHIGKNW 941
>gi|229175295|ref|ZP_04302810.1| DNA polymerase I [Bacillus cereus MM3]
gi|228608127|gb|EEK65434.1| DNA polymerase I [Bacillus cereus MM3]
Length = 891
Score = 237 bits (604), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 380 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 410
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 411 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARKVHVL 469
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 470 YDVKQTFVEELQKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 529
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST L+ L H I+
Sbjct: 530 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLEKLMDRHEII 586
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 587 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 642
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 643 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 685
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 686 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 744
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 745 KAAAEFIEKYLESFPGVQEYMSDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 804
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 805 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 849
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I + LV + ME A L+VPL V G TW
Sbjct: 850 EAPKEEIGKLEKLVPEVMEHAIELVVPLKVDYSYGPTW 887
>gi|260771611|ref|ZP_05880531.1| DNA polymerase I [Vibrio metschnikovii CIP 69.14]
gi|260613388|gb|EEX38587.1| DNA polymerase I [Vibrio metschnikovii CIP 69.14]
Length = 887
Score = 237 bits (604), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 158/437 (36%), Positives = 238/437 (54%), Gaps = 39/437 (8%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+PLV VL+ ME G+ +D + + ++L LE+KAY LA +F+L + +
Sbjct: 486 DIEVPLVPVLSRMERTGVLIDDQLLAIQSQEIAQRLVELERKAYELADQEFNLSSPKQLQ 545
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L+ +KLP+ + G PST++ L L ++P+ VI E+R LAKL + +
Sbjct: 546 TILFEQMKLPVVKKTPSGT--PSTNEEVLQELALDYPLPAVILEYRGLAKLKSTYTDKLP 603
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
+ I+ +T + +H + Q TATGRLS +PNLQ +I N E
Sbjct: 604 KM--INPTTGR--VHTSYHQAVTATGRLSSTDPNLQ-------------NIPIRNQEGRR 646
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
+ + F PS W ++A DYSQIELR+MAH S DPAL+ + D+ T AA
Sbjct: 647 IR---QAFIAPS--GWKIMAVDYSQIELRIMAHLSGDPALLDAFQQGK-DIHTATAAEII 700
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G S D V S++R + K + +G++YGM L++QL +EA+ + + +PGV ++
Sbjct: 701 GVSIDQVTSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRSEAQHYMDKYFERYPGVLRYM 760
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
S ++GYVE+L GR+ L +I+ N + A+R A+N+ QG+AADIIK AM+
Sbjct: 761 EETRSMAAEQGYVETLFGRRLHLPEIQSRNGMRRKAAERAAINAPMQGTAADIIKKAMLL 820
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
+ D+ + Q GR +LL+QVHDELV EV S + E S VQ+ MESA
Sbjct: 821 V-----------DNWIETEGQ---GRVKLLMQVHDELVFEVQESALSEIESKVQELMESA 866
Query: 2157 ALLLVPLLVKIQVGSTW 2173
A L VPL+ G+ W
Sbjct: 867 AQLNVPLVADAGHGNNW 883
>gi|456877305|gb|EMF92343.1| DNA-directed DNA polymerase [Leptospira santarosai str. ST188]
Length = 912
Score = 237 bits (604), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 271/528 (51%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGRWKNQMRRAAHNGCCR 1710
D + S+++ P+ R N++ K L+ + +G+ K ++
Sbjct: 425 FDTMLASYVIQPEGRRH---NMDALAKDLLNYDTITYDELVGTGKKKKELADIDPEQVAE 481
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + E +E +L NIE+PL++VLA ME GI +D+ + +
Sbjct: 482 YAAEDADITFRLYQIFRKTIKESGVEPILRNIEMPLISVLAKMEKTGIALDVPYFEELAS 541
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ LKL I + G STD L+
Sbjct: 542 DFDREIRHLESEIHRQAGRSFNIASTKELQKILFDDLKLKIVKKTQTGY---STDHEVLE 598
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPIV + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 599 ELLGEHPIVEKLLDYRKYTKLKSTYVDALPKM----VNPRTGRIHTSYNQTIAATGRLSS 654
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D G ++ + F + S E + +L+ DYSQIELR+
Sbjct: 655 TDPNLQNI--------PIRDREG--------RLLRKGFTVDSDE-YEILSLDYSQIELRI 697
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA+ L + HG D+ AA G E V S+ RD+ K + + ++YG+ P
Sbjct: 698 MAHISKDPAM--LEAYNHGLDIHKRTAAALYGIPEKEVTSEMRDKAKVVNFSVIYGVTPY 755
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L S +EAK I+ + +PGV S++ V + GYV++L GR+R + I
Sbjct: 756 GLSRNLRISRDEAKSFIERYMLQYPGVKSYMESTVEFAEKNGYVQTLTGRRRPVVDINST 815
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 816 HRSAKEAAKRIAINSPVQGTSADMIKIAMIRIHEDIEKKHYK---------------SRM 860
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV +E + ++K ME+A L +P+LV+ + G W
Sbjct: 861 LLQVHDELVFEVHKEEKEEFKASMKKHMENAMPLDLPILVEGKFGVNW 908
>gi|386289429|ref|ZP_10066559.1| DNA polymerase I [gamma proteobacterium BDW918]
gi|385277492|gb|EIF41474.1| DNA polymerase I [gamma proteobacterium BDW918]
Length = 894
Score = 237 bits (604), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 245/458 (53%), Gaps = 40/458 (8%)
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
R ++L K+ E L+ NIE+PLV VL+ +E G VD E + + L K++ L
Sbjct: 473 RLYQALLPKIQQHEGLLAVYRNIELPLVPVLSRIERNGAYVDRELLGKQSHELGMKMQAL 532
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++AY LAG +F+L + + +L+ L++P+ + KG PST + L L H++P+
Sbjct: 533 EQEAYELAGGEFNLASPKQLGEILFERLQIPVTKKTPKGA--PSTAEEVLVELAHDYPLP 590
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
VI EHR +AKL + + + + + +H + Q ATGRLS +PNLQ
Sbjct: 591 KVILEHRGMAKLKSTYTDKLP----LQIDPKTGRIHTSYHQAVAATGRLSSSDPNLQ--- 643
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+I +AE + + F P +++LAADYSQIELR+MAH S D
Sbjct: 644 ----------NIPIRSAEGRRIR---QAFIAPP--GYVILAADYSQIELRIMAHLSGDRG 688
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ S+ D+ AA G S D V ++R K + +G++YGM L+ QL+
Sbjct: 689 LVDAFSRGE-DIHRATAAEVFGVSTDEVSDEQRRNAKAINFGLIYGMSAFGLARQLHLGR 747
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
EA++ I + +PGV ++ S +KGYVE+L GR+ L +I N + A+R
Sbjct: 748 KEAQQYIDLYFERYPGVLRYMDETRVSASEKGYVETLFGRRLHLPEINARNGMRRQAAER 807
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI + + G SS+ A ++++QVHDELVL
Sbjct: 808 TAINAPMQGTAADIIKRAMIAVDKYLSG------SSVDA---------KMIMQVHDELVL 852
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EV P+ ++ + V + M +AA L VPL V + VG+ W
Sbjct: 853 EVAPADLETVQTEVVRLMMAAADLAVPLEVGVGVGANW 890
>gi|187778405|ref|ZP_02994878.1| hypothetical protein CLOSPO_01998 [Clostridium sporogenes ATCC 15579]
gi|187772030|gb|EDU35832.1| DNA-directed DNA polymerase [Clostridium sporogenes ATCC 15579]
Length = 875
Score = 237 bits (604), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 175/583 (30%), Positives = 287/583 (49%), Gaps = 87/583 (14%)
Query: 1591 EIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLK 1650
EI E ++++K T++ K VL+ LG+E G +F
Sbjct: 376 EIFESKEIKKITYDSKNPRTVLR-----------------KLGMEFNGINF--------- 409
Query: 1651 DGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D+ + ++++ P V+K + A+ +KN + R + +
Sbjct: 410 ---DINLAAYLIDP-------------VRKEYEISSLAS---EYLFKN-INREDEDLKIK 449
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
V L VL + + +++ E L IE PL L+ ME G VD LQ +
Sbjct: 450 EVNIMPKLYKVLEEKIKDQDIEELLYKIEQPLTETLSAMETEGFKVDKNILLQLEKKFKG 509
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
++ + + Y+++ +F++ + + +L+ L LP+ + K K ST+ LD LR
Sbjct: 510 EIESTQSEIYSMSEEEFNINSPKQLGKILFEKLDLPVIK---KTKTGYSTNAEVLDKLRD 566
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
+HPI+ I +R L K+ + + + A I + +H ++ QT TATGRLS EPN
Sbjct: 567 KHPIIDKITYYRQLTKIYSTYIEGLK--AAIDEDGK---IHSNFNQTVTATGRLSSTEPN 621
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + ++++M E R FIP+ E+ ++L+ADYSQIELR++AH
Sbjct: 622 LQNIP--IKYEMGRE---------------IRKVFIPNTEDSVILSADYSQIELRVLAHI 664
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
S D +I ++ H D+ T A+ D V R K + +GI+YG+G +LS+
Sbjct: 665 SNDKNMISAFNE-HDDIHTKTASEVFKVPIDEVTPLMRSNAKAVNFGIVYGIGDFSLSQD 723
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
LN + EAK+ I ++ +P V +L V QKGYV ++ R+R++ ++K N K
Sbjct: 724 LNITRKEAKQYIDAYLERYPNVKIYLENIVEEAIQKGYVTTILNRRRYIKEVKSSNKIVK 783
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
+ +R A+NS QGSAADIIK+AM+N+H + K D NF + ++LQVH
Sbjct: 784 AAGERLAMNSPIQGSAADIIKLAMVNVHRKL-----KED-----NF-----KSSIILQVH 828
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+L V +++ +LV++ ME L V L V I +G+ W
Sbjct: 829 DELILNVYKDELEKIKALVKREMEQVLELKVGLDVDINIGNNW 871
>gi|56421265|ref|YP_148583.1| DNA polymerase I [Geobacillus kaustophilus HTA426]
gi|56381107|dbj|BAD77015.1| DNA-directed DNA polymerase I [Geobacillus kaustophilus HTA426]
Length = 878
Score = 237 bits (604), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 231/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 476 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 535
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 536 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 592
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 593 LLKVVR--PDTKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 633
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 634 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 690
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + +GI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 691 IFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 750
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 751 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 810
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + RLLLQVHDEL+LE ++ LV + ME
Sbjct: 811 IDLN---------------ARLKEERLQARLLLQVHDELILEAPKEEMERLCRLVPEVME 855
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 856 QAVTLRVPLKVDYHYGSTW 874
>gi|429725874|ref|ZP_19260688.1| DNA-directed DNA polymerase [Prevotella sp. oral taxon 473 str.
F0040]
gi|429148466|gb|EKX91471.1| DNA-directed DNA polymerase [Prevotella sp. oral taxon 473 str.
F0040]
Length = 926
Score = 237 bits (604), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 162/523 (30%), Positives = 267/523 (51%), Gaps = 41/523 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGR-WKNQMRRAAHNGCCR 1710
D + +++ P+ + + EK + R + EA + R+ R + + + C
Sbjct: 439 FDTMLAHYVVQPEQRHNMDLLAEKYLHYRTIPIEALIGSGRTQRNMADLAPKDIVDYACE 498
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
T L +L + + E+ +IE+PL+ VLA ME G+ +D + +
Sbjct: 499 DADVTLRLYPILKEEMEKYEVTSVFTDIEMPLLPVLARMERNGVRLDTTALEETGRNFTE 558
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+++ LE + YTLAG +F++ + + VL+ L++ K Q+ ST + L+ LR
Sbjct: 559 RMQQLEGEIYTLAGHEFTITSPKQVGAVLFDELQISAKVKKTKTGQY-STSEEVLESLRD 617
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
+HPIV I +HR L KLL+ + ++ L + + +H + Q TATGRLS PN
Sbjct: 618 KHPIVEKILQHRALKKLLSTYVEALPKL----IHPETGHIHTSFNQAVTATGRLSSSNPN 673
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + + ED E+ R F+P +E + +ADYSQIELR+MAH
Sbjct: 674 LQNI------PVRGED----GREI-------RRAFVP-EEGEVFFSADYSQIELRIMAHL 715
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
S+DP ++ + D+ AAR ++ + V ER + K +GI+YG+ LSE+
Sbjct: 716 SQDPHMVADFNSGL-DIHAATAARIFHKTVEEVDRDERRKAKTANFGIIYGISAFGLSER 774
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
+ S EAKE I+++ +++P V +++ ++ Q GY+ + GR+R+L+ I GN +
Sbjct: 775 MGVSRGEAKELIENYFATYPKVRDYMNESIERAKQTGYITTQFGRRRYLADINAGNATVR 834
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
A+R AVN+ QG+AADIIK+AM+ I D L K + R++LQVH
Sbjct: 835 GYAERNAVNAPIQGTAADIIKLAMVAI-----------DRRLREE----KLQTRMILQVH 879
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL V P+ +++ LV + ME A + VPL+ + G W
Sbjct: 880 DELNFSVPPTELEQVRKLVVEEMERAFQMQVPLVAECGEGINW 922
>gi|92112681|ref|YP_572609.1| DNA polymerase I [Chromohalobacter salexigens DSM 3043]
gi|91795771|gb|ABE57910.1| DNA polymerase I [Chromohalobacter salexigens DSM 3043]
Length = 928
Score = 237 bits (604), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 153/443 (34%), Positives = 236/443 (53%), Gaps = 40/443 (9%)
Query: 1731 LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
L L +IE+PLV VL+ ME G+ +D E L+K+LR LE +AY LAG +F+L
Sbjct: 522 LAAVLDDIELPLVPVLSRMERNGVALDAERLHAQSRELEKRLRELETRAYELAGREFNLG 581
Query: 1791 TAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNC 1850
+ + +L+ LK+P+ + KG PST + L+ L ++P+ VI EHR AKL +
Sbjct: 582 SPKQLGEILFDELKIPVIKKTPKGA--PSTAEAVLEELALDYPLPKVIIEHRGFAKLKST 639
Query: 1851 TLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGG 1910
+ L ++ +T++ LH + Q TATGRLS +PNLQ + E
Sbjct: 640 YTDKLPQL--VNATTRR--LHTSYHQAVTATGRLSSSDPNLQNIPIRTE----------- 684
Query: 1911 NAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
+ KI R F+ ++ + ++AADYSQIELR+MAH S D L+ ++ D+ T
Sbjct: 685 ----EGRKI--RQAFV-ARPGYRIVAADYSQIELRIMAHLSGDKGLLDAFAEGR-DIHTA 736
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFP 2030
AA G + D+V ++R K + +G++YGM L QL+ N+A+ I + +P
Sbjct: 737 TAAEVFGVALDAVSGEQRRSAKAINFGLIYGMSAWGLGRQLHIERNQAQTYIDRYFDRYP 796
Query: 2031 GVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADII 2090
GVA ++ + GYVE++ GR+ +L +I N + A+R A+N+ QG+AADII
Sbjct: 797 GVARFMERIRAQAADDGYVETVFGRRLYLPEINAQNRTRRQAAERTAINAPMQGTAADII 856
Query: 2091 KIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQ 2150
K+AMI++ + G + +++QVHDELV EV + + V+
Sbjct: 857 KLAMIDVDRWLREGDFD---------------AWMVMQVHDELVFEVKEAQVDAFTDAVR 901
Query: 2151 KCMESAALLLVPLLVKIQVGSTW 2173
+ ME AA L VPL V+ G W
Sbjct: 902 QRMEGAAKLDVPLTVEANAGDNW 924
>gi|403237757|ref|ZP_10916343.1| DNA polymerase I [Bacillus sp. 10403023]
Length = 876
Score = 237 bits (604), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 174/526 (33%), Positives = 258/526 (49%), Gaps = 46/526 (8%)
Query: 1652 GIDM--CIVSWILWPDDERSSNPNLEK--EVKKRLSSEAAAAANRSGRWKNQMRRAAHNG 1707
GID I S+IL P D + K + S EA ++ A H
Sbjct: 389 GIDFDGLIASYILNPSDSTEDVAAVAKLKGITDVQSDEAVYGRGAKQSIPSEEILAEH-- 446
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ L + K L E E ++E+PL +LADME G+ VD+E +
Sbjct: 447 LVRKAIGLSKLKEIFVKELKENEQYELFTDLEMPLSFILADMESIGVKVDVERLKKMGEE 506
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L++ L+ LE+K Y LAG +F++ + + +L+ L+L + + K K ST L+
Sbjct: 507 LKEHLQELEQKIYELAGEEFNINSPKQLGVILFEKLQLTV---YKKTKTGYSTSADILEK 563
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L EH I+ I +R + KL + + + + + T K +H + Q T TGRLS
Sbjct: 564 LAKEHEIIEYILHYRQVGKLQSTYIEGLLKV--VHEDTCK--VHTRFQQALTQTGRLSST 619
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R F+PS+++W + AADYSQIELR++
Sbjct: 620 DPNLQNIPIRLE---------------EGRKI--RQAFVPSKKDWFMFAADYSQIELRVL 662
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH + D L+ + D+ T A ED V S R Q K + +GI+YG+ L
Sbjct: 663 AHIANDENLVHAFTNDL-DIHTKTAMDVFHVKEDEVTSNMRRQAKAVNFGIVYGISDFGL 721
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S+ L + EA I+ + +SFPGV ++ V QKGYV +L R+R++ +I N
Sbjct: 722 SQNLGITRKEAGHFIERYFASFPGVKEYMEEIVEDVRQKGYVSTLLHRRRYIPEITARNF 781
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+ +AA + K + +LLL
Sbjct: 782 NVRSFAERTAMNTPIQGSAADIIKKAMID---------------MAARLKKEKLQAKLLL 826
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+ E I+ +V + ME+A L VPL V G TW
Sbjct: 827 QVHDELIFEAPEEEIEILKQIVPEVMENAISLKVPLKVDYSYGKTW 872
>gi|424836452|ref|ZP_18261101.1| DNA polymerase I [Clostridium sporogenes PA 3679]
gi|365977146|gb|EHN13249.1| DNA polymerase I [Clostridium sporogenes PA 3679]
Length = 875
Score = 236 bits (603), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 250/478 (52%), Gaps = 42/478 (8%)
Query: 1696 WKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIG 1755
+KN + R + + V L VL + + + + E L +E PL L+ ME G
Sbjct: 436 FKN-INREDEDLKIKEVNIMPKLYKVLEEKIKKQNIEELLYTVEQPLTETLSAMETEGFK 494
Query: 1756 VDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGK 1815
VD LQ + ++ + + Y+++ +F++ + + +L+ L LP+ + K K
Sbjct: 495 VDKNILLQLEKKFKGEIESTQSEIYSMSEEEFNINSPKQLGKILFEKLDLPVIK---KTK 551
Query: 1816 QHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWL 1875
ST+ LD LR +HPI+ I +R L K+ + + + A I + +H ++
Sbjct: 552 TGYSTNAEVLDKLRDKHPIIDKITYYRQLTKIYSTYIEGLK--ASIDEDGK---IHSNFN 606
Query: 1876 QTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILL 1935
QT TATGRLS EPNLQ + ++++M E R FIP+ E+ ++L
Sbjct: 607 QTVTATGRLSSTEPNLQNIP--IKYEMGRE---------------IRKVFIPNTEDSVIL 649
Query: 1936 AADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLI 1995
+ADYSQIELR++AH S D +I ++ H D+ T A+ D V R K +
Sbjct: 650 SADYSQIELRVLAHISNDKNMISAFNE-HDDIHTKTASEVFKVPIDEVTPLMRSNAKAVN 708
Query: 1996 YGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGR 2055
+GI+YG+G +LS+ LN + EAK+ I ++ +P V +L V QKGYV ++ R
Sbjct: 709 FGIVYGIGDFSLSQDLNITRKEAKQYIDAYLERYPNVKLYLENIVEEAIQKGYVTTILNR 768
Query: 2056 KRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAAN 2115
+R++ ++K N K+ +R A+NS QGSAADIIK+AM+N+H + K D N
Sbjct: 769 RRYIKEVKSSNKIVKAAGERLAMNSPIQGSAADIIKLAMVNVHRKL-----KED-----N 818
Query: 2116 FQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
F + ++LQVHDEL+L V +++ +LV+K ME L V L V I +G+ W
Sbjct: 819 F-----KSSIILQVHDELILNVYKDELEKVKALVKKEMEQVLELKVGLDVDINIGNNW 871
>gi|359686702|ref|ZP_09256703.1| DNA polymerase I [Leptospira santarosai str. 2000030832]
Length = 912
Score = 236 bits (603), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 270/528 (51%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGRWKNQMRRAAHNGCCR 1710
D + S+++ P+ R N++ K L+ + +G+ K ++
Sbjct: 425 FDTMLASYVIQPEGRRH---NMDALAKDLLNYDTITYDELVGTGKKKKELADIDPEQVAE 481
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + E +E +L NIE+PL++VLA ME GI +D+ +
Sbjct: 482 YAAEDADITFRLYQIFRKTIKESGVEPILRNIEMPLISVLAKMEKTGIALDVPYFEELAR 541
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ LKL I + G STD L+
Sbjct: 542 DFDREIRHLESEIHRQAGRSFNIASTKELQKILFDDLKLKIVKKTQTGY---STDHEVLE 598
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPIV + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 599 ELLGEHPIVEKLLDYRKYTKLKSTYVDALPKM----VNPRTGRIHTSYNQTIAATGRLSS 654
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D G ++ + F + S E + +L+ DYSQIELR+
Sbjct: 655 TDPNLQNI--------PIRDREG--------RLLRKGFTVDSDE-YEILSLDYSQIELRI 697
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA+ L + HG D+ AA G E V S+ RD+ K + + ++YG+ P
Sbjct: 698 MAHISKDPAM--LEAYNHGLDIHKRTAAALYGIPEKEVTSEMRDKAKVVNFSVIYGVTPY 755
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L S +EAK I+ + +PGV S++ V + GYV++L GR+R + I
Sbjct: 756 GLSRNLRISRDEAKSFIERYMLQYPGVKSYMESTVEFAEKNGYVQTLTGRRRPVVDINST 815
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 816 HRSAKEAAKRIAINSPVQGTSADMIKIAMIKIHEDIEKKHYK---------------SRM 860
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV +E + ++K ME+A L +P+LV+ + G W
Sbjct: 861 LLQVHDELVFEVHKEEKEEFKASMKKHMENAMPLDLPILVEGKFGVNW 908
>gi|4731571|gb|AAD28505.1|AF121780_1 DNA polymerase I [Rhodothermus marinus]
Length = 924
Score = 236 bits (603), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 198/663 (29%), Positives = 303/663 (45%), Gaps = 107/663 (16%)
Query: 1518 DKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEH 1577
D + + + + G+A WE YYV P L G+ + VL
Sbjct: 358 DTETTSTEAMWASLVGIAFSWEKGQGYYVPTP-------------LPDGTPTETVL---- 400
Query: 1578 QLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENV 1637
+R+ I+ +R RK N+K + VL V +
Sbjct: 401 ---------ERLAPIL-RRAQRKVGQNLKYDLVVLARHGVQV------------------ 432
Query: 1638 GSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGR 1695
P + D + +++ P++ NL+ ++ L + + SGR
Sbjct: 433 -------PPPYF----DTMVAHYLIAPEEPH----NLDVLARQYLRYQMVSITELIGSGR 477
Query: 1696 WKNQMRRAAHNG----CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMEL 1751
+ MR + + C L VL L L +E PL+ VLADME
Sbjct: 478 DQKSMRDVSIDEVGPYACEDTDIALQLADVLAAELDRHGLRHIAEEMEFPLIEVLADMER 537
Query: 1752 WGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGH 1811
GI +D + L+ +L LE K Y +AG++F++ + +A+VL+ L L
Sbjct: 538 TGICIDRAVLREIGKQLEAELHELEVKIYEVAGVEFNIGSPQQLADVLFKKLGLKPRART 597
Query: 1812 NKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLH 1871
+ G+ PST + L L +HP+ +I + R LAKL + + + L + + +H
Sbjct: 598 STGR--PSTKESVLQELATQHPLPGLILDWRHLAKLKSTYVDGLEPL----IHPETGRIH 651
Query: 1872 GHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQEN 1931
+ QT TATGRLS PNLQ + V +M E R F+P +
Sbjct: 652 TTFNQTVTATGRLSSSNPNLQNIP--VRTEMGRE---------------IRRAFVP-RPG 693
Query: 1932 WILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQT 1991
W LL+ADY QIELR++A S D AL + D+ T AAR + V ++R +
Sbjct: 694 WKLLSADYVQIELRILAALSGDEALRRAFLEGQ-DIHTATAARVFKVPPEQVTPEQRRRA 752
Query: 1992 KRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVES 2051
K + YGI YG+ L+++L CS+ EA+E I+ ++ +FPGV +LH V QKGYVE+
Sbjct: 753 KMVNYGIPYGISAWGLAQRLRCSTREAQELIEEYQRAFPGVTRYLHRVVEEARQKGYVET 812
Query: 2052 LKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSS 2111
L GR+R++ I N E+S A+R AVN QG+ AD+IK+AM++I+ + Y
Sbjct: 813 LLGRRRYVPNINSRNRAERSMAERIAVNMPIQGTQADMIKLAMVHIYHRLKREGY----- 867
Query: 2112 LAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLL-VPLLVKIQVG 2170
R ++LLQVHDELV E+ P ++ LV++ M+ A L VP+ V I VG
Sbjct: 868 ----------RAKMLLQVHDELVFEMPPEEVEPVRQLVEQEMKQALPLEGVPIEVDIGVG 917
Query: 2171 STW 2173
W
Sbjct: 918 DNW 920
>gi|90415433|ref|ZP_01223367.1| putative DNA polymerase I [gamma proteobacterium HTCC2207]
gi|90332756|gb|EAS47926.1| putative DNA polymerase I [marine gamma proteobacterium HTCC2207]
Length = 926
Score = 236 bits (603), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 271/529 (51%), Gaps = 52/529 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQM--RRAAHNGCCR 1710
D + S++L D +S +++ L E A+ +G+ Q+ + A +
Sbjct: 438 FDTMLESYVL---DSVASRHDMDSLALNYLGEETIKFADVAGKGAAQLTFNQVALDQAGP 494
Query: 1711 RVAQ----TRALCSVLWKLLVSE-ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
A+ T L LW + +E L + IE+PLV VL+ +E G VD Q
Sbjct: 495 YAAEDADITLRLHQTLWPRVAAEPTLTKVFEEIELPLVPVLSRIERTGALVDDTLLFQQS 554
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
L +L LE +A+ LAG +F+L + + +L+ L++P+ + KG PST + L
Sbjct: 555 QELSARLGELETEAWELAGQQFNLASPKQLGEILFEKLQIPVLKKTAKGA--PSTKEEVL 612
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
L ++P+ V+ EHR LAKL + + ++ I+ T + +H + Q+ TATGRLS
Sbjct: 613 QELALDYPLPKVLLEHRGLAKLKSTYTDKLPTM--INSVTGR--IHTSYHQSGTATGRLS 668
Query: 1886 MEEPNLQCVE-HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
+PNLQ + E + + CK L+AADYSQIEL
Sbjct: 669 SSDPNLQNIPIRSAEGRRVRQAFVAAPG----CK---------------LVAADYSQIEL 709
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH S+DP+L+ S D+ AA G + V +R K + +G++YGM
Sbjct: 710 RIMAHLSEDPSLLAAFSAGQ-DIHRATAAEVFGVENEEVTIDQRRSAKAINFGLIYGMSA 768
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
L+ QL + +A E I+ + + +PGV ++++ S ++G+VE++ GR+ +L +I
Sbjct: 769 FGLARQLGINRKQAAEYIELYFTRYPGVQNYMNNIRHSAAEQGFVETVFGRRLYLPEINA 828
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK+AMIN+H+ + S L + +
Sbjct: 829 SNGMRRQAAERTAINAPMQGTAADIIKLAMINVHN------WLETSDLTS---------K 873
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELVLEV S ++E + MESAA LLVPL+V I VG W
Sbjct: 874 IIMQVHDELVLEVPESEMEEVQKGLNDLMESAAELLVPLVVDIGVGDNW 922
>gi|410448980|ref|ZP_11303049.1| DNA-directed DNA polymerase [Leptospira sp. Fiocruz LV3954]
gi|418746599|ref|ZP_13302922.1| DNA-directed DNA polymerase [Leptospira santarosai str. CBC379]
gi|410017202|gb|EKO79265.1| DNA-directed DNA polymerase [Leptospira sp. Fiocruz LV3954]
gi|410792579|gb|EKR90511.1| DNA-directed DNA polymerase [Leptospira santarosai str. CBC379]
Length = 912
Score = 236 bits (603), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 270/528 (51%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGRWKNQMRRAAHNGCCR 1710
D + S+++ P+ R N++ K L+ + +G+ K ++
Sbjct: 425 FDTMLASYVIQPEGRRH---NMDALAKDLLNYDTITYDELVGTGKKKKELADIDPEQVAE 481
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + E +E +L NIE+PL++VLA ME GI +D+ +
Sbjct: 482 YAAEDADITFRLYQIFRKTIKESGVEPILRNIEMPLISVLAKMEKTGIALDVPYFEELAR 541
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ LKL I + G STD L+
Sbjct: 542 DFDREIRHLESEIHRQAGRSFNIASTKELQKILFDDLKLKIVKKTQTGY---STDHEVLE 598
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPIV + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 599 ELLGEHPIVEKLLDYRKYTKLKSTYVDALPKM----VNPRTGRIHTSYNQTIAATGRLSS 654
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D G ++ + F + S E + +L+ DYSQIELR+
Sbjct: 655 TDPNLQNI--------PIRDREG--------RLLRKGFTVDSDE-YEILSLDYSQIELRI 697
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA+ L + HG D+ AA G E V S+ RD+ K + + ++YG+ P
Sbjct: 698 MAHISKDPAM--LEAYNHGLDIHKRTAAALYGIPEKEVTSEMRDKAKVVNFSVIYGVTPY 755
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L S +EAK I+ + +PGV S++ V + GYV++L GR+R + I
Sbjct: 756 GLSRNLRISRDEAKSFIERYMLQYPGVKSYMESTVEFAEKNGYVQTLTGRRRPVVDINST 815
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 816 HRSAKEAAKRIAINSPVQGTSADMIKIAMIRIHEDIEKKHYK---------------SRM 860
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV +E + ++K ME+A L +P+LV+ + G W
Sbjct: 861 LLQVHDELVFEVHKEEKEEFKASMKKHMENAMPLDLPILVEGKFGVNW 908
>gi|383449641|ref|YP_005356362.1| DNA polymerase I [Flavobacterium indicum GPTSA100-9]
gi|380501263|emb|CCG52305.1| DNA polymerase I [Flavobacterium indicum GPTSA100-9]
Length = 948
Score = 236 bits (603), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 200/737 (27%), Positives = 321/737 (43%), Gaps = 126/737 (17%)
Query: 1469 DRPNRDPCLVNKDRACNKGPINAINASGGFD---------CFLDRWEATHEFYFDIH--- 1516
D D L+ K K P N ++ G D F E T+ FY +
Sbjct: 302 DTNGTDTNLITKKAPIKKAPENQMDLFGFSDDESDEPKGHSFYATLETTNHFYQIVQGEI 361
Query: 1517 ----------------YDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKD 1560
+D + + E+ G++ WE +YV P
Sbjct: 362 PTRLLIQNLMTQKSVCFDTETTGIDALNAELVGMSFSWEKGKAFYVPFP----------- 410
Query: 1561 RFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQ 1620
E+Q E +Q + E + K NMK ++VL+
Sbjct: 411 ---------------ENQ-EEAQQLANKFKPFFENEAIEKIGQNMKYDLKVLR------- 447
Query: 1621 RFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKK 1680
+ GLE GS F D I +++ PD + + E +K
Sbjct: 448 ----------NYGLEVKGSLF------------DTMIAHYLINPDMRHNMDVLAETYLKY 485
Query: 1681 RLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVL---WKLLVSEELIEALLN 1737
S + G+ + MR A A+ + L ++ ++ + + L +
Sbjct: 486 SPKS-IETLIGKKGKGQKSMRDVALEDIKEYAAEDADITLQLKENFQPILEKVGTKKLFD 544
Query: 1738 -IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
IEIPLV VLADME GI +D++ + + +++ LE+K Y AG F+L + +
Sbjct: 545 EIEIPLVQVLADMEAEGIRLDVDFLKEMSKEMAIEIQLLEQKIYETAGETFNLASPKQLG 604
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
++L+ LK+ + +T + L L ++H IV I E R + KL + + ++
Sbjct: 605 DILFDKLKIGGAKQKKTKTGQYATGEEILSYLANDHEIVRNILEWRQMVKLQSTYIDALP 664
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
+ ++ TQ+ +H ++QT ATGRLS PNLQ + E
Sbjct: 665 N--QVDAKTQR--VHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQ------------- 707
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R FI EN+ L++ADYSQIELR++A S + +I H D+ AA+
Sbjct: 708 ----IRKAFIARDENYTLVSADYSQIELRIIAALSGEENMIKAFQN-HEDIHKSTAAKVF 762
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
+ V ++R K + +GI+YG+ LS Q N S E+ E I+++ ++P + S++
Sbjct: 763 NVPLEEVTKEQRSHAKTVNFGIIYGVSAFGLSNQTNLSRKESAELIEAYYQNYPKLKSFM 822
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYVE++ GR+R+L I N + A+R AVN+ QGSAADIIKIAMIN
Sbjct: 823 SHQVDFAREHGYVETISGRRRYLKDINSANAIVRGGAERNAVNAPIQGSAADIIKIAMIN 882
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH + N+Q ++LLQVHDELV +V S +++ +++ ME+A
Sbjct: 883 IHKRLK----------QENWQ-----SKMLLQVHDELVFDVHNSELEKIQPMIKHEMENA 927
Query: 2157 ALLLVPLLVKIQVGSTW 2173
++ VPL V+I +G W
Sbjct: 928 FIMAVPLEVEIGLGKDW 944
>gi|418753546|ref|ZP_13309789.1| DNA-directed DNA polymerase [Leptospira santarosai str. MOR084]
gi|409966052|gb|EKO33906.1| DNA-directed DNA polymerase [Leptospira santarosai str. MOR084]
Length = 912
Score = 236 bits (603), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 270/528 (51%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGRWKNQMRRAAHNGCCR 1710
D + S+++ P+ R N++ K L+ + +G+ K ++
Sbjct: 425 FDTMLASYVIQPEGRRH---NMDALAKDLLNYDTITYDELVGTGKKKKELADIDPEQVAE 481
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + E +E +L NIE+PL++VLA ME GI +D+ +
Sbjct: 482 YAAEDADITFRLYQIFRKTIKESGVEPILRNIEMPLISVLAKMEKTGIALDVPYFEELAR 541
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ LKL I + G STD L+
Sbjct: 542 DFDREIRHLESEIHRQAGRSFNIASTKELQKILFDDLKLKIVKKTQTGY---STDHEVLE 598
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPIV + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 599 ELLGEHPIVEKLLDYRKYTKLKSTYVDALPKM----VNPRTGRIHTSYNQTIAATGRLSS 654
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D G ++ + F + S E + +L+ DYSQIELR+
Sbjct: 655 TDPNLQNI--------PIRDREG--------RLLRKGFTVDSDE-YEILSLDYSQIELRI 697
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA+ L + HG D+ AA G E V S+ RD+ K + + ++YG+ P
Sbjct: 698 MAHISKDPAM--LEAYNHGLDIHKRTAAALYGIPEKEVTSEMRDKAKVVNFSVIYGVTPY 755
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L S +EAK I+ + +PGV S++ V + GYV++L GR+R + I
Sbjct: 756 GLSRNLRISRDEAKSFIERYMLQYPGVKSYMESTVEFAEKNGYVQTLTGRRRPVVDINST 815
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 816 HRSAKEAAKRIAINSPVQGTSADMIKIAMIKIHEDIEKKHYK---------------SRM 860
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV +E + ++K ME+A L +P+LV+ + G W
Sbjct: 861 LLQVHDELVFEVHKEEKEEFKASMKKHMENAMPLDLPILVEGKFGVNW 908
>gi|260910758|ref|ZP_05917412.1| DNA-directed DNA polymerase I [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635119|gb|EEX53155.1| DNA-directed DNA polymerase I [Prevotella sp. oral taxon 472 str.
F0295]
Length = 927
Score = 236 bits (603), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 189/667 (28%), Positives = 303/667 (45%), Gaps = 108/667 (16%)
Query: 1515 IHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLT 1574
I D + + + + ++ GL+ E YYV +P+ +N++
Sbjct: 357 ISLDTETTSTNAIEAQLVGLSFAIEEKKAYYVPVPEQ--------------ADEAQNIVN 402
Query: 1575 PEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGL 1634
R I E K N+K ++VL++ +++Q
Sbjct: 403 -------------RFKAIYENPKTLKVGQNIKYDLEVLRNYGIALQ-------------- 435
Query: 1635 ENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAA---AAAN 1691
G F D + ++L P E N + EV L+ E A
Sbjct: 436 ---GPLF------------DTMVAHYLLQP--ELRHNMDFMAEV--YLNYETVHIDALIG 476
Query: 1692 RSGRWKNQMRRAA----HNGCCRRVAQTRALCSVLWKLLVSEELIEALLN-IEIPLVNVL 1746
G+ + MR A +N C T L +VL LV E +E L N +E+PL+ VL
Sbjct: 477 PKGKAQKNMRELAPSEVYNYACEDADITLQLKNVLQPKLV-EAGVERLFNEVEMPLIPVL 535
Query: 1747 ADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLP 1806
A+ME G+ +D + + +++ LE++ Y AG F++ + + ++L+G +K+
Sbjct: 536 AEMECNGVRIDTAALKETSQVFTERMLQLEQEIYQAAGKTFNVASPKQVGDILFGEMKII 595
Query: 1807 IPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQ 1866
K Q+ T + L LR +HPIV I ++R L KLL + ++ L ++ +
Sbjct: 596 DKPKKTKTGQY-VTSEEVLQTLRSKHPIVAHILDYRALKKLLGTYVDALPKL----INPR 650
Query: 1867 KYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFI 1926
+H + Q TATGRLS +PNLQ + + ED E+ C FI
Sbjct: 651 TGHIHTSFNQAVTATGRLSSSDPNLQNI------PVRGED----GKEIRKC-------FI 693
Query: 1927 PSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQ 1986
P +E +ADYSQIELR+MAH S+D ++ + + D+ AA+ + V
Sbjct: 694 P-EEGCEFFSADYSQIELRVMAHLSQDANMLDAFREGY-DIHAATAAKIYNKPVSEVTRD 751
Query: 1987 ERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQK 2046
ER + KR +GI+YG+ L+++LN EAK+ I + FP V ++ A +
Sbjct: 752 ERTKAKRANFGIIYGITVFGLADRLNIERAEAKQLIDGYFKMFPQVQQYMEQAKETARAN 811
Query: 2047 GYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVY 2106
GYVE+ R+R+L I GN ++ A+R A+N+ QGSAADIIK+AM+ I
Sbjct: 812 GYVETFFHRRRYLPDINSGNATVRAIAERNAINAPIQGSAADIIKVAMVRIFQ------- 864
Query: 2107 KPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVK 2166
FQ R +++LQVHDEL V P+ ++ +V + M++A LL VPL+
Sbjct: 865 --------RFQRENIRSKMILQVHDELNFSVLPTEKEQVERIVMEEMQAAYLLDVPLVAD 916
Query: 2167 IQVGSTW 2173
G+ W
Sbjct: 917 SGWGNNW 923
>gi|386002437|ref|YP_005920736.1| Putative Ski2-type helicase [Methanosaeta harundinacea 6Ac]
gi|357210493|gb|AET65113.1| Putative Ski2-type helicase [Methanosaeta harundinacea 6Ac]
Length = 717
Score = 236 bits (603), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 189/592 (31%), Positives = 303/592 (51%), Gaps = 75/592 (12%)
Query: 504 DLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILML 563
DL+SWLP E+ +Y+ GI +LYP Q E + G+L+ ++++ T+AGK+ +AE+ ML
Sbjct: 14 DLTSWLPREVAELYQNEGIRELYPPQAEAVE-KGLLEGKSILVSVPTAAGKTMMAELAML 72
Query: 564 RRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKD-----TS 618
R +S G+ +L ++P ++ +EK PLG V G G +D
Sbjct: 73 RAALSGGR-SLYIVPLRALASEKHAAFS-RFSPLGVKV----GVSSGDMERRDEYLGRNH 126
Query: 619 VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGT 678
+ V T EKA+SL+ R ++ ++V+DE+H++ NRG LE+ +TKL
Sbjct: 127 IIVATSEKADSLIRNGARWIR--DLSVLVVDEIHLLDSPNRGPTLEMTITKLL------- 177
Query: 679 SDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+ +P +QI+G+SAT+ N VA WL+A L E+ +RPV L+E +
Sbjct: 178 --------------RLNPQ--MQILGLSATVANAREVAAWLKAELVESRWRPVELKEGVI 221
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
++ +V + + D +++L + + EG +LIF SSR+ E+TA
Sbjct: 222 CDGVLHFPGEEVPLS---------RRRDDLIDLVKDTIGEGGQILIFDSSRRNAEATATK 272
Query: 799 VSKFLKK-FSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEE 857
++K + + S SE I T + RR L + + SGVA+HHAGL E+
Sbjct: 273 LAKVVAEAIEGKAASRLSEKILATGDTETGRR--------LADCVRSGVAFHHAGLLAEQ 324
Query: 858 REVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPR-----IGRDFIDGTRYRQMAG 912
R VVE +R G ++ + +T TLAAG+NLPARRV+ + R G I YRQMAG
Sbjct: 325 RAVVEGGFRSGSIKAIASTPTLAAGLNLPARRVLIKSYRRYEGSRGMVPIPVMEYRQMAG 384
Query: 913 RAGRTGIDTKGESMLICKPE-EVKKIMGLLNESCP-PLHSCLSEDKNGMTHAILEVVAGG 970
RAGR G+D +GE++L+ K E EV+ ++ P + S L+ + TH +L VA G
Sbjct: 385 RAGRPGLDPRGEALLMAKNEAEVRDLLDHYVLGEPEEIFSKLAMEPALRTH-LLSTVATG 443
Query: 971 IVQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRA 1030
+ E++ R+V T S + + + + L +L LE + TPLG
Sbjct: 444 FAKDEEELKRFVDSTFYASQQEAWHLEATMERVLEFLIEGGMLEAD-----LRPTPLGEL 498
Query: 1031 AFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYY 1082
+ P + IV+++L RA+E + +DL L+++ T + PD + Y
Sbjct: 499 VSRLYIDPLSARIVVENL-RAKEKTKI-TDLTLLHMIT-----MTPDMDTLY 543
>gi|289664670|ref|ZP_06486251.1| DNA polymerase I [Xanthomonas campestris pv. vasculorum NCPPB 702]
gi|289670794|ref|ZP_06491869.1| DNA polymerase I [Xanthomonas campestris pv. musacearum NCPPB 4381]
Length = 933
Score = 236 bits (603), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 232/460 (50%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALLN-IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L +E +E + IE+PLV+VLA +E G+ VD + L K++
Sbjct: 510 TLRLHHVLGPKLAAEPGLERVYREIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 569
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 570 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 627
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 628 LPRVILEYRGLTKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 683
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P+ L+A DYSQIELR+MAH S D
Sbjct: 684 IPIRTE---------------DGRRIR-RAFVAPAGRK--LIACDYSQIELRIMAHLSGD 725
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G DV AA GR+ D+V ER K + +G++YGM L+ QL
Sbjct: 726 PGLVGAFES-GADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGI 784
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 785 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 844
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+++ I G R +++LQVHDEL
Sbjct: 845 ERAAINAPMQGTAADIIKRAMVSVDGWIAGHAQ---------------RAKMILQVHDEL 889
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M SAA L VPL+V +G W
Sbjct: 890 VFEADTDFVDTLLSEVTTRMASAAELRVPLVVDSGIGDNW 929
>gi|422005752|ref|ZP_16352920.1| DNA-directed DNA polymerase [Leptospira santarosai serovar Shermani
str. LT 821]
gi|417255561|gb|EKT85030.1| DNA-directed DNA polymerase [Leptospira santarosai serovar Shermani
str. LT 821]
Length = 912
Score = 236 bits (603), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 270/528 (51%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGRWKNQMRRAAHNGCCR 1710
D + S+++ P+ R N++ K L+ + +G+ K ++
Sbjct: 425 FDTMLASYVIQPEGRRH---NMDALAKDLLNYDTITYDELVGTGKKKKELADIDPEQVAE 481
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + E +E +L NIE+PL++VLA ME GI +D+ +
Sbjct: 482 YAAEDADITFRLYQIFRKTIKESGVEPILRNIEMPLISVLAKMEKTGIALDVPYFEELAR 541
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ LKL I + G STD L+
Sbjct: 542 DFDREIRHLESEIHRQAGRSFNIASTKELQKILFDDLKLKIVKKTQTGY---STDHEVLE 598
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPIV + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 599 ELLGEHPIVEKLLDYRKYTKLKSTYVDALPKM----VNPRTGRIHTSYNQTIAATGRLSS 654
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D G ++ + F + S E + +L+ DYSQIELR+
Sbjct: 655 TDPNLQNI--------PIRDREG--------RLLRKGFTVDSDE-YEILSLDYSQIELRI 697
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA+ L + HG D+ AA G E V S+ RD+ K + + ++YG+ P
Sbjct: 698 MAHISKDPAM--LEAYNHGLDIHKRTAAALYGIPEKEVTSEMRDKAKVVNFSVIYGVTPY 755
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L S +EAK I+ + +PGV S++ V + GYV++L GR+R + I
Sbjct: 756 GLSRNLRISRDEAKSFIERYMLQYPGVKSYMESTVEFAEKNGYVQTLTGRRRPVVDINST 815
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 816 HRSAKEAAKRIAINSPVQGTSADMIKIAMIRIHEDIEKKHYK---------------SRM 860
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV +E + ++K ME+A L +P+LV+ + G W
Sbjct: 861 LLQVHDELVFEVHKEEKEEFKASMKKHMENAMPLDLPILVEGKFGVNW 908
>gi|421111425|ref|ZP_15571902.1| DNA-directed DNA polymerase [Leptospira santarosai str. JET]
gi|410803315|gb|EKS09456.1| DNA-directed DNA polymerase [Leptospira santarosai str. JET]
Length = 912
Score = 236 bits (603), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 270/528 (51%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANR--SGRWKNQMRRAAHNGCCR 1710
D + S+++ P+ R N++ K L+ + +G+ K ++
Sbjct: 425 FDTMLASYVIQPEGRRH---NMDALAKDLLNYDTITYDELVGTGKKKKELADIDPEQVAE 481
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + E +E +L NIE+PL++VLA ME GI +D+ +
Sbjct: 482 YAAEDADITFRLYQIFRKTIKESGVEPILRNIEMPLISVLAKMEKTGIALDVPYFEELAR 541
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ LKL I + G STD L+
Sbjct: 542 DFDREIRHLESEIHRQAGRSFNIASTKELQKILFDDLKLKIVKKTQTGY---STDHEVLE 598
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPIV + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 599 ELLGEHPIVEKLLDYRKYTKLKSTYVDALPKM----VNPRTGRIHTSYNQTIAATGRLSS 654
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D G ++ + F + S E + +L+ DYSQIELR+
Sbjct: 655 TDPNLQNI--------PIRDREG--------RLLRKGFTVDSDE-YEILSLDYSQIELRI 697
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA+ L + HG D+ AA G E V S+ RD+ K + + ++YG+ P
Sbjct: 698 MAHISKDPAM--LEAYNHGLDIHKRTAAALYGIPEKEVTSEMRDKAKVVNFSVIYGVTPY 755
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L S +EAK I+ + +PGV S++ V + GYV++L GR+R + I
Sbjct: 756 GLSRNLRISRDEAKSFIERYMLQYPGVKSYMESTVEFAEKNGYVQTLTGRRRPVVDINST 815
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 816 HRSAKEAAKRIAINSPVQGTSADMIKIAMIRIHEDIEKKHYK---------------SRM 860
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV +E + ++K ME+A L +P+LV+ + G W
Sbjct: 861 LLQVHDELVFEVHKEEKEEFKASMKKHMENAMPLDLPILVEGKFGVNW 908
>gi|384425931|ref|YP_005635288.1| DNA polymerase I [Xanthomonas campestris pv. raphani 756C]
gi|341935031|gb|AEL05170.1| DNA polymerase I [Xanthomonas campestris pv. raphani 756C]
Length = 927
Score = 236 bits (603), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 196/707 (27%), Positives = 310/707 (43%), Gaps = 110/707 (15%)
Query: 1474 DPCLVNKDRACNKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHG 1533
DP L G I D ++ R A +F FD D + ++ G
Sbjct: 320 DPAL------SAPGQYETILTQAQLDSWIARLRAAGQFAFDTETDSLDALQANLI----G 369
Query: 1534 LAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIM 1593
L+V E Y+ D + DR Q ++ ++
Sbjct: 370 LSVAAEPGQAAYLPFGHDFPGAPAQLDR---------------------TQALAQLAPLL 408
Query: 1594 EKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGI 1653
VRK + K + V++ +++ +
Sbjct: 409 TDPAVRKLGQHGKYDLHVMRRHGIALAGYAD----------------------------- 439
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRA--AHNGCCRR 1711
D + S++L + S+ +++ K+ L + + G+ Q++ A + R
Sbjct: 440 DTLLESFVL---NSGSARHDMDSLAKRYLGYDTVKYEDICGKGAKQIKFAQVSLEDATRY 496
Query: 1712 VAQ----TRALCSVLWKLLVSEELIEALLN-IEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ T L VL K L +E +E++ IE+PLV VL +E G+ VD +
Sbjct: 497 AAEDADITLRLHQVLGKRLAAEPALESVYREIEMPLVGVLERIEANGVCVDAAELRRQSA 556
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
L K++ ++KA LAG F+L + + +L+ LKLP KG+ PST++ L+
Sbjct: 557 DLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALE 614
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
+ +H + VI ++R+LAKL + + + + Q +H + Q ATGRLS
Sbjct: 615 AIADQHELPRVILDYRSLAKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSS 670
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + E D +I R F P+ L+A DYSQIELR+
Sbjct: 671 SDPNLQNIPIRTE---------------DGRRIR-RAFVAPAGRK--LIACDYSQIELRI 712
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
MAH S DP L+G DV AA GR+ D+V ER K + +G++YGM
Sbjct: 713 MAHLSGDPGLVGAFES-GADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFG 771
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
L+ QL EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+
Sbjct: 772 LARQLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGS 831
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
+++ A+R A+N+ QG+AADIIK AM+++ D +A + Q R ++
Sbjct: 832 QGQRAGAERAAINAPMQGTAADIIKRAMVSV-----------DGWIADHAQ----RALMI 876
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LQVHDELV E D + ++ V M +AA L VPL+V VG W
Sbjct: 877 LQVHDELVFEADADFVDTLLAEVTARMSAAASLRVPLVVDSGVGDNW 923
>gi|423457177|ref|ZP_17433974.1| DNA polymerase I [Bacillus cereus BAG5X2-1]
gi|401148954|gb|EJQ56437.1| DNA polymerase I [Bacillus cereus BAG5X2-1]
Length = 891
Score = 236 bits (603), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 251/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 466 VHVLYDVKQTFVEELQKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST L+ L
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLEKLMDR 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMSDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|255658136|ref|ZP_05403545.1| DNA polymerase I [Mitsuokella multacida DSM 20544]
gi|260849443|gb|EEX69450.1| DNA polymerase I [Mitsuokella multacida DSM 20544]
Length = 878
Score = 236 bits (603), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 258/526 (49%), Gaps = 58/526 (11%)
Query: 1651 DGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D D+ + +++L P+ + + P L ++ + ++ E+ A W+ +
Sbjct: 406 DFFDIELAAYLLEPERSKYALPELSQKYLQEMAPESFADERSRAVWE-----------AK 454
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+++ L +L L EEL + +E+PLV VLA ME G+ V+ + +
Sbjct: 455 TISR---LYPLLGAKLEEEELTHLMKTVELPLVEVLAAMEQNGVYVNRAHLAEKTEEVAD 511
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+L+ +E+ Y +AG F+L + + VL+ L LP+ K K ST+ L+ LR
Sbjct: 512 RLQTIEQSIYEMAGHTFNLNSPKQLGTVLFEELDLPV---RKKTKTGYSTNAEVLESLRL 568
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
EHPIV I +R +KL + L I L R T +H + QT TATGRLS +PN
Sbjct: 569 EHPIVEQILAYRLWSKLKSTYLDGITGLIR----TDTGRVHTSFNQTVTATGRLSSSDPN 624
Query: 1891 LQCVE-HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
LQ + E +M R F P + LL+ADYSQIELRL+AH
Sbjct: 625 LQNIPVRTEEGRM------------------IRALFEPGEGYDYLLSADYSQIELRLLAH 666
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
S D I + + D+ AA G + V + R K + +GI+YG+ L+
Sbjct: 667 MSGDENFIDVFKRGQ-DIHARTAAEVFGIPLEEVTPELRRHAKAVNFGIVYGISDFGLAR 725
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
L+ S EA + I + +PGV +++ V+ H+ GYV ++ GR+R L IK N +
Sbjct: 726 NLHISRKEAGDYISRYFERYPGVRAFMDKVVAEAHETGYVTTMFGRRRELPAIKSRNFNQ 785
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMI-NIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+ A+R A+N+ QG+AAD+IK+AMI H + GV + R+LLQ
Sbjct: 786 RMLAERMAMNTPIQGTAADVIKLAMIAAYHRLKEAGV----------------KSRILLQ 829
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
VHDELVLEV S + +++++ ME L VPL++ I G W
Sbjct: 830 VHDELVLEVVESELDVVQAILRESMEHVVALSVPLIIDIHWGRNWA 875
>gi|385800354|ref|YP_005836758.1| DNA polymerase I [Halanaerobium praevalens DSM 2228]
gi|309389718|gb|ADO77598.1| DNA polymerase I [Halanaerobium praevalens DSM 2228]
Length = 880
Score = 236 bits (602), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/444 (35%), Positives = 233/444 (52%), Gaps = 40/444 (9%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PL+ VLA MEL G+ VD + L K+L + KA+ LAG +F+L + +
Sbjct: 473 IELPLIKVLAQMELNGVKVDKDWLANLSEKLGKRLAIITDKAHKLAGEEFNLNSPKQLGE 532
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ L LP+ + G ST+ L+ L +H I+P+I E+R LAKL + + S+
Sbjct: 533 ILFEKLGLPVIKRTKTGY---STNASVLEKLEGKHEIIPLISEYRELAKLKSTYIDSLPP 589
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
L I+ T K +H + Q TATGRLS EPNLQ + E +I
Sbjct: 590 L--INDETAK--IHTSFNQMVTATGRLSSTEPNLQNIPIRTE---EGREI---------- 632
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R FIPS+ + ILLA DYSQIELR+ AH S D L + D+ T AA
Sbjct: 633 ----RKAFIPSRSDMILLAVDYSQIELRVFAHLSGDQKLKEAFNN-EADIHTETAAEVFE 687
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
++V R K + +GI YGM LS+ L+ EA+ I + F GV ++
Sbjct: 688 VKAEAVTPDLRRHAKVINFGIAYGMSAYGLSQDLDIPVEEAQTYIDKYFERFSGVKKYME 747
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
+ + GY E++ GR+R++ +I N +S A+R A+N+ QG+AADI+K +M+++
Sbjct: 748 QTIEKVKKLGYAETMFGRRRYIPEINSSNYHRRSFAERTAINTPVQGTAADIMKKSMLDV 807
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA 2157
+S + S L N +LLQVHDELV EV+ + + EA L+++ ME+
Sbjct: 808 YSCL------KKSELDLN---------ILLQVHDELVFEVNRNDLDEAAELIKEKMENTT 852
Query: 2158 LLLVPLLVKIQVGSTWGSLEPFQA 2181
L VPL+V +Q+G W E ++
Sbjct: 853 KLDVPLIVDLQIGENWRDKEDYEV 876
>gi|423400568|ref|ZP_17377741.1| DNA polymerase I [Bacillus cereus BAG2X1-2]
gi|401655292|gb|EJS72826.1| DNA polymerase I [Bacillus cereus BAG2X1-2]
Length = 877
Score = 236 bits (602), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 268/578 (46%), Gaps = 71/578 (12%)
Query: 1597 DVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMC 1656
++RK+T++ K I LK + +Q G F D+
Sbjct: 366 EMRKYTFDAKRAIVALKWNGIDMQ-----------------GIDF------------DLL 396
Query: 1657 IVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQT 1715
I +++L P D + K + + S+ + R ++ A + R+V
Sbjct: 397 IAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARKVHVL 455
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L E E +E+PL VLADME+ G+ VD E L +L+ +
Sbjct: 456 YDVKQTFVEELQKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGRLKEM 515
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
E++ Y LAG +F++ + + +L+ +L LP+ + K K ST L+ L H I+
Sbjct: 516 EQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLEKLMDRHEII 572
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
P I +R L KL + + + + S +H + Q T TGRLS +PNLQ +
Sbjct: 573 PNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
+E + KI R F+PS+E WI+ AADYSQIELR++AH + D
Sbjct: 629 IRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIANDKG 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L +
Sbjct: 672 LVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITR 730
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S A+R
Sbjct: 731 KAAAEFIEKYLESFPGVQEYMSDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAER 790
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QG+AADIIK AMI +A + + RLLLQVHDEL+
Sbjct: 791 TAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHDELIF 835
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E I++ LV + ME A L VPL V G TW
Sbjct: 836 EAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|398344473|ref|ZP_10529176.1| DNA polymerase I [Leptospira inadai serovar Lyme str. 10]
Length = 871
Score = 236 bits (602), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/525 (30%), Positives = 261/525 (49%), Gaps = 45/525 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKK----RLSSEAAAAANRSGRWKNQMRRAAHNGC 1708
D + S+IL P+ + +L KE+ S N+ W+ ++ + +
Sbjct: 384 FDTMLASYILQPESRHHNMDDLAKELLNYQTIHYSDLVGTGKNKKNLWEVELEKVSEY-A 442
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
T L + L K + + I++PL+ VLADME GI +D +
Sbjct: 443 SEDADITLRLYNSLRKPVKDSGMESVYKEIDLPLIRVLADMEKAGIAIDAGYFAELSKDF 502
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
Q++++ L + + AG +F++ + ++ VL+ LKL + + G STD L+ L
Sbjct: 503 QREVKDLVRHIHKYAGREFNIASTKELQKVLFEDLKLKVIKKTQTGY---STDHEVLEEL 559
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
EHPI+ + ++R KL++ + ++ ++ +S + +H ++ T ATGRLS +
Sbjct: 560 LGEHPIIEKLLDYRKYTKLISTYVETLPTM----VSAKDGRIHTNYNMTIAATGRLSSTD 615
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ N I + R FI +++ LL+ DYSQIELR+MA
Sbjct: 616 PNLQ-----------NIPIREKEGRL------IRKGFISGHKDFELLSLDYSQIELRIMA 658
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H S DPA++ K D+ A+ G SE V + RD+ K + + ++YG+ P LS
Sbjct: 659 HVSGDPAMLDAYKKGI-DIHKRTASALYGVSESDVTPEMRDKAKVVNFSVIYGVTPYGLS 717
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
L S +EAK I+ + + +PGV ++ ++ C +KGYVE+LKGR+R + I N
Sbjct: 718 RNLRVSRDEAKGFIERYLTQYPGVQKYMDETIAFCEEKGYVETLKGRRRPVPDINSTNRM 777
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
K A+R A+N+ QG+ AD+IKIAM++IH I +K +LLLQ
Sbjct: 778 SKEAARRVAINTPIQGTCADMIKIAMMHIHKRIADQGWK---------------SKLLLQ 822
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VHDELV EV E + ++ ME+A L VP+ V + G+ W
Sbjct: 823 VHDELVFEVHKKEKDEFLKSAKELMENALPLTVPIKVSGKFGANW 867
>gi|392553088|ref|ZP_10300225.1| DNA polymerase I [Pseudoalteromonas spongiae UST010723-006]
Length = 912
Score = 236 bits (602), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 252/496 (50%), Gaps = 41/496 (8%)
Query: 1680 KRLSSEAAAAANRSGRWKNQMR-RAAHNGCCRRVAQTRALCSVLWKLLVSE-ELIEALLN 1737
K +S E A ++ NQ+ A T L + LW +L E EL++ +
Sbjct: 452 KNISFEEIAGKGKAQLTFNQIELEKAAPYAAEDADITLRLHNTLWPMLEKEPELVDVFNS 511
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PLVNVL+DME G+ +D + Q + +L LEK+AY +A +F+L + +
Sbjct: 512 IELPLVNVLSDMERTGVHIDSQMLAQQSVEIAARLEELEKEAYEIAEEEFNLSSTKQLQG 571
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ L LP+ + KG PST + L L H++P+ +I EHR LAKL + +
Sbjct: 572 ILFEKLGLPVLKKTPKGA--PSTAEEVLQELAHDYPLPKLIIEHRGLAKLKSTYTDKLPK 629
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ + TQ+ +H + Q TATGRLS +PNLQ + + NE
Sbjct: 630 M--VDEVTQR--VHTSYHQAVTATGRLSSSDPNLQNI------PIRNE-----------A 668
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R F+ + I+ AADYSQIELR+MAH S+D L+ ++ DV + AA G
Sbjct: 669 GRRIRQAFVAAPGKLIM-AADYSQIELRIMAHLSQDNGLLSAFAEGK-DVHSATAAEVFG 726
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
++V S R + K + +G++YGM LS QL+ NEA+ + ++ FPGV ++
Sbjct: 727 VPLETVTSDMRRKAKAVNFGLIYGMSAFGLSRQLDIPRNEAQHYMDTYFERFPGVLEYME 786
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
+KGYV +L GR+ +L IK N + A+R A+N+ QG+AADIIK AMIN
Sbjct: 787 RTREDAAEKGYVSTLFGRRLYLPDIKARNGARRKAAERAAINAPMQGTAADIIKRAMIN- 845
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA 2157
V G K SS +++QVHDELV E++ + E + M AA
Sbjct: 846 ----VAGWLKTQSS---------DDIEMIMQVHDELVFEINADKVDEFSDKICSLMSEAA 892
Query: 2158 LLLVPLLVKIQVGSTW 2173
L VPLLV+ G W
Sbjct: 893 QLDVPLLVEADSGDNW 908
>gi|423132365|ref|ZP_17120015.1| DNA polymerase I [Myroides odoratimimus CCUG 12901]
gi|371639436|gb|EHO05052.1| DNA polymerase I [Myroides odoratimimus CCUG 12901]
Length = 939
Score = 236 bits (602), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 176/603 (29%), Positives = 280/603 (46%), Gaps = 72/603 (11%)
Query: 1575 PEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGL 1634
PE+Q E K ++ E ++ K N+K I++LK ++++
Sbjct: 401 PENQDEA-KALAQQFAPFFEAENIEKVGQNLKYDIKILKQYDITVK-------------- 445
Query: 1635 ENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSG 1694
G F D I +++ PD R + L + K + G
Sbjct: 446 ---GPLF------------DTMIAHYLINPD-MRHNMDVLAETYLKYTPQPIEELIGKKG 489
Query: 1695 RWKNQMRRAAHNGCCRRVAQ----TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADME 1750
+ + MR + T L LV+ E NIEIPLVNVLADME
Sbjct: 490 KNQKTMRDIEAEIVKEYAGEDADITYQLKETFAPQLVATHTQELFDNIEIPLVNVLADME 549
Query: 1751 LWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG 1810
GI +D E + L ++ LE++ + AG +F+L + + ++L+ LK+ P+
Sbjct: 550 TEGIRLDTEYLKSLSDTLSTDIKLLEQRIFLEAGEEFNLASPKQLGDILFEKLKIGGPKP 609
Query: 1811 HNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL 1870
+T + L L +H IV I E R L KL N + ++ ++++ T + +
Sbjct: 610 KKTKTGQYATGEEILSDLAPKHEIVRDILEWRQLVKLQNTYVDALPD--QVNIKTNR--I 665
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQE 1930
H ++Q ATGRLS PNLQ + E R F+ E
Sbjct: 666 HTEYMQAVAATGRLSSNNPNLQNIPIRTERGRQ-----------------VRKAFVARDE 708
Query: 1931 NWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQ 1990
N++LLAADYSQIELR++A S++P ++ + D+ AA+ + V ++R
Sbjct: 709 NYVLLAADYSQIELRIIAALSQEPNMLESFQRGE-DIHRSTAAKVFNVPLEEVTKEQRSH 767
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +GI+YG+ LS Q N S E+KE I ++ +++P + S++ + + GYV+
Sbjct: 768 AKTVNFGIIYGVSAFGLSNQTNLSRAESKELIDAYYATYPKLKSYIATQIDFAREHGYVQ 827
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
++ GR+R+L I N K A+R AVN+ QGSAADIIKIAMINI+ + +K
Sbjct: 828 TILGRRRYLKDIHSHNAVVKGAAERNAVNAPIQGSAADIIKIAMININKKLTAENWK--- 884
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
++LLQVHDELV + ++ ++V+ ME+A L VPL+V + G
Sbjct: 885 ------------SKMLLQVHDELVFDAHKEELEALKTMVKSEMENAYKLDVPLIVDLGTG 932
Query: 2171 STW 2173
W
Sbjct: 933 DNW 935
>gi|423478724|ref|ZP_17455439.1| DNA polymerase I [Bacillus cereus BAG6X1-1]
gi|402426755|gb|EJV58870.1| DNA polymerase I [Bacillus cereus BAG6X1-1]
Length = 877
Score = 236 bits (602), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 251/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 393 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARK 451
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD E L +
Sbjct: 452 VHVLYDVKQTFVEELQKNEQYELFTELELPLARVLADMEVKGVKVDTERLRNMGEELAGR 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST L+ L
Sbjct: 512 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLEKLMDR 568
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL + + + + S +H + Q T TGRLS +PNL
Sbjct: 569 HEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSK----IHTRFNQVLTQTGRLSSTDPNL 624
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 625 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 667
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 NDKGLVEAFQHDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 726
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 727 GITRKAAAEFIEKYLESFPGVQEYMSDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 786
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 787 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 831
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 832 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 873
>gi|3041672|sp|P52026.2|DPO1_BACST RecName: Full=DNA polymerase I; Short=POL I
Length = 876
Score = 236 bits (602), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 237/466 (50%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L L E L +E PL +LA+ME G+ VD + Q
Sbjct: 447 LVRKAAAIWALEEPLMDELRRNEQDRLLTELEQPLAGILANMEFTGVKVDTKRLEQMGAE 506
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++L+ +E++ Y LAG +F++ + + VL+ L+LP+ K K ST L+
Sbjct: 507 LTEQLQAVERRIYELAGQEFNINSPKQLGTVLFDKLQLPV---LKKTKTGYSTSADVLEK 563
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + + T K +H + Q T TGRLS
Sbjct: 564 LAPHHEIVEHILHYRQLGKLQSTYIEGLLKV--VHPVTGK--VHTMFNQALTQTGRLSSV 619
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 620 EPNLQNIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVL 662
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D LI + D+ T A SE+ V + R Q K + +GI+YG+ L
Sbjct: 663 AHIAEDDNLIEAFRRGL-DIHTKTAMDIFHVSEEDVTANMRRQAKAVNFGIVYGISDYGL 721
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN + EA E I+ + +SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 722 AQNLNITRKEAAEFIERYFASFPGVKQYMDNIVQEAKQKGYVTTLLHRRRYLPDITSRNF 781
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+ L+ + + + RLLL
Sbjct: 782 NVRSFAERTAMNTPIQGSAADIIKKAMID---------------LSVRLREERLQARLLL 826
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE I+ LV + ME A L VPL V G TW
Sbjct: 827 QVHDELILEAPKEEIERLCRLVPEVMEQAVTLRVPLKVDYHYGPTW 872
>gi|66817246|ref|XP_642487.1| hypothetical protein DDB_G0277751 [Dictyostelium discoideum AX4]
gi|60470570|gb|EAL68549.1| hypothetical protein DDB_G0277751 [Dictyostelium discoideum AX4]
Length = 516
Score = 236 bits (601), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/523 (30%), Positives = 260/523 (49%), Gaps = 73/523 (13%)
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
R L S L+ + + IE+ ++ + A ME GIG + + C R +Q K+ YL
Sbjct: 2 RQLLSTLFIQSAENQSLFIFSEIEMKILPIFAMMEFVGIGFNEKICESGREKVQNKINYL 61
Query: 1776 EKKAYTL-AGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHP---------------- 1818
E KA L G FSL + DI+ +L+ LK+P+PE +Q+
Sbjct: 62 EYKAKVLLPGKVFSLSSTEDISQLLFQDLKIPVPEIAKANQQYNGNKGGGGCGGGVRRQN 121
Query: 1819 -STDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL---HGHW 1874
ST L+ + H HP+ +I E R KL + + L + + ++ + +
Sbjct: 122 YSTKGAVLEHISHHHPLPGLIIEIR---KLTHHITHYVDILGKYEYHSDRFNMRRIYSTI 178
Query: 1875 LQTSTATGRLSMEEPNLQCVEHMVEFKM-------------------------SNEDIYG 1909
QT TGR+SM PNLQ + H +EF++ +N+ +
Sbjct: 179 QQTVVPTGRISMAFPNLQNISHPIEFRVAPSETDLQSQDSIKSFQDEIHTFDYTNDQNFK 238
Query: 1910 GNAEVD----HCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG 1965
E++ K++ R+ F + ++LL+ADYSQ+ELR++ H+SKDP LI + +
Sbjct: 239 NLLEIESRCSFTKVSLRNSFTCAN-GYVLLSADYSQLELRILTHYSKDPNLIEMFNYSRE 297
Query: 1966 -DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
DVF IA + +G + V +ER+ K L+YGILYGMG N+++ +L +AK +++
Sbjct: 298 LDVFKCIAHQLSGVDYEKVSDEERNFAKHLVYGILYGMGINSIASELKVDKEKAKVQLER 357
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN--KEKSKAQRQAVNSIC 2082
FK+++ + +L Y+++L GR R S I K+ K +R A NS+
Sbjct: 358 FKNTYRTLIDFLESIEDRVFIDAYIKTLFGRIRNFSAIHDPKTLPKDIGKIKRGARNSVP 417
Query: 2083 QGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVI 2142
QG+AADI K+AMINI S F L ++LQ+HDEL+ EV + I
Sbjct: 418 QGTAADITKLAMINIQS---------------QFDQLSINVHMVLQLHDELLFEVPLTDI 462
Query: 2143 KEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQADNYT 2185
++ ++++ ME+ L VPL +K+ +G+ WGSLE F N+T
Sbjct: 463 DQSAKIIKESMENVVKLNVPLPIKMSIGTNWGSLESFNF-NFT 504
>gi|806281|gb|AAC37139.1| DNA polymerase I [Geobacillus stearothermophilus]
Length = 876
Score = 236 bits (601), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 237/466 (50%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L L E L +E PL +LA+ME G+ VD + Q
Sbjct: 447 LARKAAAIWALEEPLMDELRRNEQDRLLTELEQPLAGILANMEFTGVKVDTKRLEQMGAE 506
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++L+ +E++ Y LAG +F++ + + VL+ L+LP+ K K ST L+
Sbjct: 507 LTEQLQAVERRIYELAGQEFNINSPKQLGTVLFDKLQLPV---LKKTKTGYSTSADVLEK 563
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + + T K +H + Q T TGRLS
Sbjct: 564 LAPHHEIVEHILHYRQLGKLQSTYIEGLLKV--VHPVTGK--VHTMFNQALTQTGRLSSV 619
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 620 EPNLQNIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVL 662
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D LI + D+ T A SE+ V + R Q K + +GI+YG+ L
Sbjct: 663 AHIAEDDNLIEAFRRGL-DIHTKTAMDIFHVSEEDVTANMRRQAKAVNFGIVYGISDYGL 721
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN + EA E I+ + +SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 722 AQNLNITRKEAAEFIERYFASFPGVKQYMDNIVQEAKQKGYVTTLLHRRRYLPDITSRNF 781
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QGSAADIIK AMI+ L+ + + + RLLL
Sbjct: 782 NVRSFAERTAMNTPIQGSAADIIKKAMID---------------LSVRLREERLQARLLL 826
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+LE I+ LV + ME A L VPL V G TW
Sbjct: 827 QVHDELILEAPKEEIERLCRLVPEVMEQAVALRVPLKVDYHYGPTW 872
>gi|116327352|ref|YP_797072.1| DNA-directed DNA polymerase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116120096|gb|ABJ78139.1| DNA-directed DNA polymerase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 921
Score = 236 bits (601), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 173/557 (31%), Positives = 280/557 (50%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G +L+ + D + S+++ P+ R N++ K L+
Sbjct: 412 GQNIKYDLIVLENHG---FILNNIQF----DTMLASYVIQPEGRRH---NMDVLAKDLLN 461
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ + +G+ K ++ A+ + L+++ + E +E +L N
Sbjct: 462 YDTITYDDLVGTGKKKKELTDIDPEQVAEYAAEDADITFRLYQIFRKKIKESGVEPILRN 521
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 522 IEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHKQAGRSFNIASTKELQK 581
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL + G STD L+ L EHPIV + ++R KL + + ++
Sbjct: 582 ILFDDLKLKTVKKTQTGY---STDHEVLEELLGEHPIVEKLLDYRKYTKLKSTYVDALPK 638
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D G
Sbjct: 639 M----VNPRTGRIHTSYNQTIAATGRLSSTDPNLQNI--------PIRDREG-------- 678
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
++ + F + S E + +L+ DYSQIELR+MAH SKDPA+ L + HG D+ AA
Sbjct: 679 RLLRKGFTVDSDE-YEILSLDYSQIELRIMAHISKDPAM--LEAYNHGLDIHIRTAAALY 735
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + +PGV S++
Sbjct: 736 GVPEKEVTPEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMIQYPGVKSYM 795
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R + I + K A+R A+NS QG++AD+IKIAMIN
Sbjct: 796 DSMVEFAEKNGYVQTLTGRRRLIVDINSTHKSAKEAAKRVAINSPVQGTSADMIKIAMIN 855
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I Y R R+LLQVHDELV EV +E ++K ME+A
Sbjct: 856 IHEDIEKKHY---------------RSRMLLQVHDELVFEVHKKEKEEFKISMKKHMENA 900
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P+LV+ + G W
Sbjct: 901 MPLDLPILVEGKFGVNW 917
>gi|229163579|ref|ZP_04291528.1| DNA polymerase I [Bacillus cereus R309803]
gi|228619829|gb|EEK76706.1| DNA polymerase I [Bacillus cereus R309803]
Length = 891
Score = 236 bits (601), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 171/522 (32%), Positives = 253/522 (48%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR-LSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ I +++L P D + K + + S+ + R ++ A + R+
Sbjct: 407 FDLLIAAYLLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEVVAEH-VARK 465
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
V + + L E E +E+PL VLADME+ G+ VD + L +
Sbjct: 466 VHVLYDVKQTFIEELEKNEQYELFTELELPLARVLADMEVKGVKVDTDRLRNMGEELAGR 525
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L+ +E++ Y LAG +F++ + + +L+ +L LP+ + K K ST LD L
Sbjct: 526 LKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIK---KTKTGYSTSADVLDKLMDH 582
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P I +R L KL N T I L ++ + +H + Q T TGRLS +PNL
Sbjct: 583 HEIIPNILHYRQLGKL-NSTY--IEGLLKV-VHEDSCKIHTRFNQVLTQTGRLSSTDPNL 638
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+E WI+ AADYSQIELR++AH +
Sbjct: 639 QNIPIRLE---------------EGRKI--RQAFVPSEEGWIMYAADYSQIELRVLAHIA 681
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L+ D+ T A G +D V S R Q K + +GI+YG+ LS+ L
Sbjct: 682 NDKGLVEAFQNDM-DIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDYGLSQNL 740
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ A E I+ + SFPGV ++ V QKGYV +L R+R++ +I N +S
Sbjct: 741 GITRKAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRS 800
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK AMI +A + + RLLLQVHD
Sbjct: 801 FAERTAMNTPIQGTAADIIKKAMI---------------IMADRLEEEGLQARLLLQVHD 845
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I++ LV + ME A L VPL V G TW
Sbjct: 846 ELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTW 887
>gi|145353969|ref|XP_001421269.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581506|gb|ABO99562.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 402
Score = 236 bits (601), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/427 (38%), Positives = 232/427 (54%), Gaps = 50/427 (11%)
Query: 525 LYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVA-EILMLRRLISTGKMALLVLPYVSIC 583
LYPWQ E +++ RR+L Y A T GKS VA E+L L AL+VLPYV++
Sbjct: 8 LYPWQAEAINLVAA-SRRSLCYTAPTGGGKSRVADELLRLSLTNFPAAKALVVLPYVALV 66
Query: 584 AEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKDTS---VAVCTIEKANSLVNRMLEEGRL 640
EK LE LL PLG VR Y G + G+ P +S AV TIEKA+S VNR+ E G +
Sbjct: 67 REKVASLESLLRPLGIKVRGYAGVECEGA-PLGSSRERCAVTTIEKASSCVNRLFETGEI 125
Query: 641 SEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGTSDSSSGENSGTSSGKADPAHGL 700
S + ++V+DELHMV++ RG LE +L K+R+ G SGK + G
Sbjct: 126 SLLSVVVVDELHMVSEDERGCALEGMLAKIRH---------------GVKSGKVS-SDGP 169
Query: 701 QIVGMSATM--PNVAAVADWLQAALYETNFRPVPLEEYIKVGNAIYSKK------MDVVR 752
QIV MSAT+ ++ +A WL A +Y ++ RPV L+EY+ +Y+K+ ++ R
Sbjct: 170 QIVCMSATVGKSSMERLARWLDAEIYVSHHRPVELKEYVVCVGGVYAKENRGEAGWELTR 229
Query: 753 TILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKFSINVHS 812
+ + + + + + EL +V HS L+FCSS+ C A ++ L +N ++
Sbjct: 230 VADSPSRV---ELEIVAELVGQVFVNAHSSLVFCSSKSQCSVYATKLASLLP---VNPNT 283
Query: 813 SDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRV 872
+ + +A P D L + SG+A+HHAGLT E+ V+E +R G +
Sbjct: 284 AHLREECVARLYEAAEGEP---DQALVACVRSGLAWHHAGLTTAEKRVIEEGFRAGAILA 340
Query: 873 LTATSTLAAGVNLPARRVIFRQPRIGRDFIDG------TRYRQMAGRAGRTGIDTKGESM 926
LT T+TLAAGVNLPARR + I R FI G +Y+QMAGRAGR G GES
Sbjct: 341 LTCTTTLAAGVNLPARRCV-----ILRGFIAGLPTPSMAQYKQMAGRAGRKGQSDFGESF 395
Query: 927 LICKPEE 933
L+ +E
Sbjct: 396 LVTTKQE 402
>gi|353251721|pdb|3PV8|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Ddttp-Da In Closed Conformation
gi|353251722|pdb|3PV8|D Chain D, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Ddttp-Da In Closed Conformation
gi|353251729|pdb|3PX0|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Dctp-Da Mismatch (Tautomer) In
Closed Conformation
gi|353251730|pdb|3PX0|D Chain D, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Dctp-Da Mismatch (Tautomer) In
Closed Conformation
gi|353251735|pdb|3PX4|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Ddctp-Da Mismatch (Wobble) In
Ajar Conformation
gi|353251736|pdb|3PX4|D Chain D, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Ddctp-Da Mismatch (Wobble) In
Ajar Conformation
gi|353251741|pdb|3PX6|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Ddctp-Da Mismatch (Tautomer) In
Closed Conformation
gi|353251742|pdb|3PX6|D Chain D, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Ddctp-Da Mismatch (Tautomer) In
Closed Conformation
gi|353251866|pdb|3THV|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Ddatp-Dt In Closed Conformation
gi|353251867|pdb|3THV|D Chain D, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Ddatp-Dt In Closed Conformation
gi|353251872|pdb|3TI0|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Ddgtp-Dc In Closed Conformation
gi|353251873|pdb|3TI0|D Chain D, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Dna And Ddgtp-Dc In Closed Conformation
gi|390136476|pdb|4DSE|A Chain A, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment
F710y, Dna Duplex, And Rctp (Paired With Dg Of Template)
In Presence Of Mg2+
gi|390136477|pdb|4DSE|D Chain D, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment
F710y, Dna Duplex, And Rctp (Paired With Dg Of Template)
In Presence Of Mg2+
gi|390136482|pdb|4DSF|A Chain A, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment
F710y, Dna Duplex, And Rctp (Paired With Dg Of Template)
In Presence Of Mn2+
gi|390136483|pdb|4DSF|D Chain D, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment
F710y, Dna Duplex, And Rctp (Paired With Dg Of Template)
In Presence Of Mn2+
Length = 592
Score = 236 bits (601), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 231/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 190 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 249
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 250 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 306
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R +T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 307 LLKVVR--PATKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 347
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 348 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 404
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + YGI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 405 IFQVSEDEVTPNMRRQAKAVNYGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 464
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 465 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 524
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 525 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 569
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 570 QAVTLRVPLKVDYHYGSTW 588
>gi|326803837|ref|YP_004321655.1| DNA-directed DNA polymerase [Aerococcus urinae ACS-120-V-Col10a]
gi|326651542|gb|AEA01725.1| DNA-directed DNA polymerase [Aerococcus urinae ACS-120-V-Col10a]
Length = 888
Score = 236 bits (601), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 266/524 (50%), Gaps = 48/524 (9%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRL---SSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D+ I S+++ D N+ +E SE + +++ R H
Sbjct: 405 DVLIASYLIHARDLSGDVANVAREFNLDYLAYDSEVYGKGKKVAVPEDKTRLYDH--LVA 462
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+V+ L ++ L ++E++E IE+PL VLA ME+ GI VD + ++
Sbjct: 463 KVSVINDLLPIIKDRLEADEMVELYRKIELPLAQVLAKMEIMGISVDRSRLVGLSQSYEE 522
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQ-HPSTDKHCLDLLR 1829
+L L+++ Y AG++F++ + ++ VL+ + L +G K K + ST + L+ L+
Sbjct: 523 QLDQLQEEIYREAGVEFNINSTQQLSKVLFEDMGL---KGGKKTKSGNYSTAQSELEKLQ 579
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
PI+ +I +R LAKL + + I Q +H ++QT T TGRLS +P
Sbjct: 580 GV-PIIDLILAYRQLAKLQSTYVQGILDYIH-----QDGKVHSRFIQTLTTTGRLSSADP 633
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + E + KI R F+PS +W++ ++DYSQIELR++AH
Sbjct: 634 NLQNIPIRTE---------------EGRKI--RQAFVPSHPDWVIFSSDYSQIELRVLAH 676
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
S DP L K + D+ T AA+ + E + ER Q K + +GI+YG+ LS+
Sbjct: 677 VSGDPHLQEAF-KENKDIHTATAAKVFHKDEKDISKDERRQAKAVNFGIVYGISDYGLSQ 735
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
L+ S EAK I + +P VA ++ +V + GY ++L R+R+L +K N
Sbjct: 736 NLSISRQEAKAFIDKYFEIYPKVAEYMDKSVEIAREAGYAKTLFNRRRYLPDLKAKNYNV 795
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S A+R A+NS QG+AADIIK+AM+ + + + L AN LLLQV
Sbjct: 796 RSFAERTAMNSPIQGTAADIIKVAMVEMDQAL------KEHQLQAN---------LLLQV 840
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDEL+ EV +++ +LV+ ME+A L VPL+V GSTW
Sbjct: 841 HDELIFEVAKEDLEDLAALVKDVMENAVSLDVPLIVDSNYGSTW 884
>gi|415884119|ref|ZP_11546148.1| DNA polymerase I [Bacillus methanolicus MGA3]
gi|387591914|gb|EIJ84231.1| DNA polymerase I [Bacillus methanolicus MGA3]
Length = 877
Score = 236 bits (601), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 259/530 (48%), Gaps = 45/530 (8%)
Query: 1647 VHLKD-GIDMCIVSWILWPDDERSSNPNLEKE--VKKRLSSEAAAAANRSGRWKNQMRRA 1703
+HLK D + S+I+ P + ++ K S EA + ++ + A
Sbjct: 386 IHLKGVEFDFLLASYIINPSESIDDIASIAKRYNFTSVQSDEAFYGKGAKRKIPDEEKLA 445
Query: 1704 AHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQ 1763
H R+ A AL L L + E +E+PL +LADME G+ +D+ +
Sbjct: 446 EH--LVRKAAAMEALKEKLELELKENQQYELFKELEMPLSLILADMEYQGVKIDINRLRE 503
Query: 1764 ARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKH 1823
+ + ++L+ +E K Y LAG KF++ + + +L+ L LP+ K K ST
Sbjct: 504 MGHEINEQLKEIENKIYDLAGEKFNINSPKQLGVILFEKLGLPV---MKKTKTGYSTSAD 560
Query: 1824 CLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGR 1883
L+ L HEH IV I +R L KL + + + + + T K +H + Q T TGR
Sbjct: 561 VLEKLEHEHEIVREILHYRQLGKLQSTYIEGLLKV--VDPKTNK--VHTRFNQALTQTGR 616
Query: 1884 LSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIE 1943
LS +PNLQ + +E + KI R FIPS+++W++ AADYSQIE
Sbjct: 617 LSSTDPNLQNIPIRLE---------------EGRKI--RQAFIPSEKDWVIFAADYSQIE 659
Query: 1944 LRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMG 2003
LR++AH + D LI K D+ T A ++ V S R K + +GI+YG+
Sbjct: 660 LRVLAHIANDEKLIQAF-KEDLDIHTKTAMEVFHVEKEEVTSNMRRHAKAVNFGIVYGIS 718
Query: 2004 PNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIK 2063
LS+ L + EA + I+ + S+PGV ++ V QKGYV ++ R+R+L +I
Sbjct: 719 DYGLSQSLGITRKEAAKFIERYLESYPGVKEYMEEIVKDAKQKGYVSTILHRRRYLPEIT 778
Query: 2064 FGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRC 2123
N +S A+R A+N+ QGSAADIIK AMI+ +A + +
Sbjct: 779 SRNYNVRSFAERTAMNTPIQGSAADIIKKAMID---------------MAERLKAEGLKT 823
Query: 2124 RLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
RLLLQVHDEL+ E I++ +V ME+A L VPL V G TW
Sbjct: 824 RLLLQVHDELIFEAPKDEIEKLKEIVPDVMENAVELKVPLKVDYSFGPTW 873
>gi|407698144|ref|YP_006822932.1| DNA polymerase I superfamily [Alcanivorax dieselolei B5]
gi|407255482|gb|AFT72589.1| DNA polymerase I superfamily [Alcanivorax dieselolei B5]
Length = 921
Score = 236 bits (601), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 241/463 (52%), Gaps = 42/463 (9%)
Query: 1715 TRALCSVLWKLLVSEELIEALLN-IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L LW L E+ +E + IEIPLV VL+ +E G VD L K++
Sbjct: 493 TWRLHEALWPKLEKEKSLERVFKEIEIPLVPVLSRIERNGAYVDAAKLRHQSQYLAKRMA 552
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE+KAY LAG KF+L + + +LY L++P+ + KG PST + L L E+P
Sbjct: 553 ELEEKAYELAGQKFNLGSPKQLGEILYTKLEIPVIKKTPKGA--PSTAEAVLQELALEYP 610
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI +R +AKL N + L + ++ +H + Q ATGRLS +PNLQ
Sbjct: 611 LPEVIMGYREVAKLKNTYTDKLPEL----IDSRTGRVHTSYHQAVAATGRLSSSDPNLQN 666
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIP---SQENWILLAADYSQIELRLMAHF 1950
+ E + KI + F +P +E ++A DYSQIELR+MAH
Sbjct: 667 IPVRSE---------------EGRKIR-QAFSVPPSDGKEARKIVACDYSQIELRIMAHL 710
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
S D L+ K D+ AA G++ D V ER K + +G++YGM L++Q
Sbjct: 711 SGDKGLLDAFEKGL-DIHRATAAEVWGKTVDEVSDNERRNAKAINFGLIYGMSAFGLAKQ 769
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L EA+E I + +PGV ++ ++ KGYVE+L GR+ +L +I N + +
Sbjct: 770 LRIPRGEAQEYIDRYFEKYPGVRRYMDDTRATAADKGYVETLFGRRLYLPEINSRNGQRR 829
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
A+R A+N+ QGSAADIIK AM+ +H + D++ +F L +++QVH
Sbjct: 830 QAAERTAINAPMQGSAADIIKRAMVQVHDWL-------DTT---DFDAL-----MIMQVH 874
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DELV EV + ++ V V++ ME+AA L VPL+V +G W
Sbjct: 875 DELVFEVAETQVESLVKEVRQRMEAAAELKVPLIVDAGIGDNW 917
>gi|425063764|ref|ZP_18466889.1| DNA polymerase I [Pasteurella multocida subsp. gallicida X73]
gi|404382318|gb|EJZ78779.1| DNA polymerase I [Pasteurella multocida subsp. gallicida X73]
Length = 930
Score = 236 bits (601), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 270/529 (51%), Gaps = 56/529 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D ++S++L + + N+++ K+ L + + +G+ K Q+ A
Sbjct: 445 DTMLLSYVL----DSTGRHNMDELAKRYLGHQTIHFEDIAGKGKAQLTFNQIPLEQAAEY 500
Query: 1708 CCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
T L VLW K+ EL++ +E+PL +VL+ +E G+ +D +
Sbjct: 501 AAEDADITMKLQQVLWEKVAAQPELVKLYQTMELPLASVLSRIERHGVLIDSDALFSQSQ 560
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+ +L LE++AY LAG +F+L + + +L+ L LP+ + KG PST++ L+
Sbjct: 561 QIGVRLTALEQQAYELAGQQFNLASTKQLQEILFDKLSLPVLKKTPKGA--PSTNEEVLE 618
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT--LHGHWLQTSTATGRL 1884
L +EH + ++ EHR L+KL + ++ + K T +H + Q TATGRL
Sbjct: 619 ELAYEHALPKILVEHRGLSKLKSTYTD------KLPLMVNKDTGRVHTSYHQAVTATGRL 672
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + + NE+ G R FI + E + ++AADYSQIEL
Sbjct: 673 SSSDPNLQNI------PIRNEE---GR--------RIRQAFI-APEGYQIMAADYSQIEL 714
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH S+D LI ++ D+ AA G V S++R K + +G++YGM
Sbjct: 715 RIMAHLSQDKGLINAFNEGK-DIHRSTAAEIFGIPLAQVSSEQRRSAKAINFGLIYGMSS 773
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QL +EA++ + + +PGV +++H + +GYV +L R+ +L I+
Sbjct: 774 FGLSRQLGIPRHEAQKYMDLYFQRYPGVQAFMHDIRETAKAQGYVTTLFDRRLYLPDIQS 833
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK AMI + I G +PD +
Sbjct: 834 SNAIRRKAAERVAINAPMQGTAADIIKRAMITLDREIAG---QPD-------------IK 877
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV I+ ++++ ME AA L+VPL+V + VG W
Sbjct: 878 MIMQVHDELVFEVRSDKIEHFRTIIKTTMEQAAQLVVPLIVDVGVGKNW 926
>gi|15602930|ref|NP_246002.1| DNA polymerase I [Pasteurella multocida subsp. multocida str. Pm70]
gi|12721401|gb|AAK03149.1| PolA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 930
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 270/529 (51%), Gaps = 56/529 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D ++S++L + + N+++ K+ L + + +G+ K Q+ A
Sbjct: 445 DTMLLSYVL----DSTGRHNMDELAKRYLGHQTIHFEDIAGKGKAQLTFNQIPLEQAAEY 500
Query: 1708 CCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
T L VLW K+ EL++ +E+PL +VL+ +E G+ +D +
Sbjct: 501 AAEDADITMKLQQVLWEKVAAQPELVKLYQTMELPLASVLSRIERHGVLIDSDALFSQSQ 560
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+ +L LE++AY LAG +F+L + + +L+ L LP+ + KG PST++ L+
Sbjct: 561 QIGVRLTALEQQAYELAGQQFNLASTKQLQEILFDKLSLPVLKKTPKGA--PSTNEEVLE 618
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT--LHGHWLQTSTATGRL 1884
L +EH + ++ EHR L+KL + ++ + K T +H + Q TATGRL
Sbjct: 619 ELAYEHALPKILVEHRGLSKLKSTYTD------KLPLMVNKDTGRVHTSYHQAVTATGRL 672
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + + NE+ G R FI + E + ++AADYSQIEL
Sbjct: 673 SSSDPNLQNI------PIRNEE---GR--------RIRQAFI-APEGYQIMAADYSQIEL 714
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH S+D LI ++ D+ AA G V S++R K + +G++YGM
Sbjct: 715 RIMAHLSQDKGLINAFNEGK-DIHRSTAAEIFGIPLAQVSSEQRRSAKAINFGLIYGMSS 773
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QL +EA++ + + +PGV +++H + +GYV +L R+ +L I+
Sbjct: 774 FGLSRQLGIPRHEAQKYMDLYFQRYPGVQAFMHDIRETAKAQGYVTTLFDRRLYLPDIQS 833
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK AMI + I G +PD +
Sbjct: 834 SNAIRRKAAERVAINAPMQGTAADIIKRAMITLDREIAG---QPD-------------IK 877
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV I+ ++++ ME AA L+VPL+V + VG W
Sbjct: 878 MIMQVHDELVFEVRTDKIEHFRTIIKTTMEQAAQLVVPLIVDVGVGKNW 926
>gi|89889486|ref|ZP_01200997.1| DNA polymerase I [Flavobacteria bacterium BBFL7]
gi|89517759|gb|EAS20415.1| DNA polymerase I [Flavobacteria bacterium BBFL7]
Length = 946
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 234/437 (53%), Gaps = 38/437 (8%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+PL++VLA ME+ GI +D + L+ + LEK Y +AG +F++ + +
Sbjct: 544 DIEMPLLDVLAAMEIEGINLDEDFLSSLSGDLETDITQLEKDIYEVAGEEFNIGSPKQLG 603
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L+ LKL K Q+ ST + L L +H I+ + ++R L+KL + + ++
Sbjct: 604 VILFEKLKLVDKPKKTKTGQY-STAEDVLSYLAKDHAIIQNVLDYRGLSKLKSTYVDALP 662
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
+ ++ TQ+ +H +++QT ATGRLS +PNLQ + E
Sbjct: 663 N--QVDAKTQR--IHTNYMQTVAATGRLSSTDPNLQNIPIRTERGRQ------------- 705
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R FIP EN+ L+AADYSQIELR++A S++ +I D+ AA+
Sbjct: 706 ----VRKAFIPRDENYTLIAADYSQIELRIIAALSEEENMIAAFQSGE-DIHASTAAKVF 760
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
+ + V ++R K + +GI+YG+ LS Q + S EAKE I ++ +++P + +++
Sbjct: 761 NVALEDVTREQRSNAKTVNFGIIYGVSAFGLSNQTDLSRGEAKELIDTYYATYPKLKAYM 820
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYVE++ GR+R+L I N + A+R AVN+ QGSAADIIKIAMIN
Sbjct: 821 QDQVDFARENGYVETVLGRRRYLKDINSSNAVVRGAAERNAVNAPIQGSAADIIKIAMIN 880
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH F+ + + ++LLQVHDELV ++ +++ L+Q M++A
Sbjct: 881 IHK---------------KFEEMNCKSKMLLQVHDELVFDIHNDELEDMKKLIQGEMQNA 925
Query: 2157 ALLLVPLLVKIQVGSTW 2173
+ VPL V++ G W
Sbjct: 926 YKMTVPLDVEVGTGQNW 942
>gi|425065931|ref|ZP_18469051.1| DNA polymerase I [Pasteurella multocida subsp. gallicida P1059]
gi|404383426|gb|EJZ79880.1| DNA polymerase I [Pasteurella multocida subsp. gallicida P1059]
Length = 930
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 270/529 (51%), Gaps = 56/529 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D ++S++L + + N+++ K+ L + + +G+ K Q+ A
Sbjct: 445 DTMLLSYVL----DSTGRHNMDELAKRYLGHQTIHFEDIAGKGKAQLTFNQIPLEQAAEY 500
Query: 1708 CCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
T L VLW K+ EL++ +E+PL +VL+ +E G+ +D +
Sbjct: 501 AAEDADITMKLQQVLWEKVAAQPELVKLYQTMELPLASVLSRIERHGVLIDSDALFSQSQ 560
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+ +L LE++AY LAG +F+L + + +L+ L LP+ + KG PST++ L+
Sbjct: 561 QIGVRLTALEQQAYELAGQQFNLASTKQLQEILFDKLSLPVLKKTPKGA--PSTNEEVLE 618
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT--LHGHWLQTSTATGRL 1884
L +EH + ++ EHR L+KL + ++ + K T +H + Q TATGRL
Sbjct: 619 ELAYEHALPKILVEHRGLSKLKSTYTD------KLPLMVNKDTGRVHTSYHQAVTATGRL 672
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + + NE+ G R FI + E + ++AADYSQIEL
Sbjct: 673 SSSDPNLQNI------PIRNEE---GR--------RIRQAFI-APEGYQIMAADYSQIEL 714
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH S+D LI ++ D+ AA G V S++R K + +G++YGM
Sbjct: 715 RIMAHLSQDKGLINAFNEGK-DIHRSTAAEIFGIPLAQVSSEQRRSAKAINFGLIYGMSS 773
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QL +EA++ + + +PGV +++H + +GYV +L R+ +L I+
Sbjct: 774 FGLSRQLGIPRHEAQKYMDLYFQRYPGVQAFMHDIRETAKAQGYVTTLFDRRLYLPDIQS 833
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK AMI + I G +PD +
Sbjct: 834 SNAIRRKAAERVAINAPMQGTAADIIKRAMITLDREIAG---QPD-------------IK 877
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV I+ ++++ ME AA L+VPL+V + VG W
Sbjct: 878 MIMQVHDELVFEVRSDKIEHFRTIIKTTMEQAAQLVVPLIVDVGVGKNW 926
>gi|299688922|pdb|3HP6|A Chain A, Crystal Structure Of Fragment Dna Polymerase I From Bacillus
Stearothermophilus F710y Mutant Bound To G:t Mismatch
gi|299688923|pdb|3HP6|D Chain D, Crystal Structure Of Fragment Dna Polymerase I From Bacillus
Stearothermophilus F710y Mutant Bound To G:t Mismatch
Length = 580
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 231/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 178 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 237
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 238 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 294
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R +T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 295 LLKVVR--PATKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 335
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 336 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 392
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + YGI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 393 IFQVSEDEVTPNMRRQAKAVNYGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 452
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 453 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 512
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 513 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 557
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 558 QAVTLRVPLKVDYHYGSTW 576
>gi|406670271|ref|ZP_11077523.1| DNA polymerase I [Facklamia ignava CCUG 37419]
gi|405579578|gb|EKB53673.1| DNA polymerase I [Facklamia ignava CCUG 37419]
Length = 887
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 270/543 (49%), Gaps = 65/543 (11%)
Query: 1647 VHLKDGIDM-CIVSWILWPDDERSSNPNLEKEVKKRLS---SEAAAAANRSGRWKNQMRR 1702
V LK GID C+++ L +D P++ +E L+ EA + W ++
Sbjct: 397 VELK-GIDFDCLIAAYLVMNDHLKEIPDILREFNIPLAVAYDEAVYGKGKKIAWPSEEVW 455
Query: 1703 AAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCL 1762
H +V L L + L + +++E +I++P+ +L++ME+ GI VD E L
Sbjct: 456 QPH--LASKVVALSQLVEPLKERLNTLDMMELYTDIDMPVARILSEMEITGIKVDPE-IL 512
Query: 1763 QARNL-LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTD 1821
QA++ ++ +L +EK + LAG F+L + + +L+ L LP+ + K K ST
Sbjct: 513 QAKSEEIEARLLEIEKDVFQLAGESFNLNSPKQLGEILFEKLNLPVIK---KTKTGYSTS 569
Query: 1822 KHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT-----LHGHWLQ 1876
L+ L+H+HPI+ +I ++R L KL L + Q Y +H H++Q
Sbjct: 570 ADVLEKLQHQHPIIELILDYRQLNKLQGTYL----------IGLQDYIQADGKIHTHFVQ 619
Query: 1877 TSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLA 1936
T T TGRLS +PNLQ + +E + KI R F+PS+ W L +
Sbjct: 620 TLTQTGRLSSTDPNLQNIPIRIE---------------EGRKI--RQAFVPSEPGWQLFS 662
Query: 1937 ADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS--VGSQERDQTKRL 1994
ADYSQIELR++AH S D A+ G+ AR +D V +R Q K +
Sbjct: 663 ADYSQIELRVLAHISGDKAMQQAFID--GEDIHSATARAIFHLDDDQKVTPNDRRQAKAV 720
Query: 1995 IYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKG 2054
+GI+YG+ LS+ LN S EAK I + ++ G+ ++ V + GYV +L
Sbjct: 721 NFGIVYGISDYGLSQNLNISRAEAKRFIDRYLETYSGIHQFMEKIVEQAKKDGYVSTLFH 780
Query: 2055 RKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAA 2114
R+R+L I N +S A+R A+NS QG+AADIIKIAMI LA
Sbjct: 781 RRRYLPDIHSSNFNVRSFAERTALNSPIQGTAADIIKIAMIR---------------LAE 825
Query: 2115 NFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVS-LVQKCMESAALLLVPLLVKIQVGSTW 2173
+ + R+LLQVHDEL+LE PS E +S +V ME A L +PL+V G+ W
Sbjct: 826 KLEAMNLSSRILLQVHDELILE-GPSEEMEILSEIVPAMMEQAVELSIPLIVDYNQGNNW 884
Query: 2174 GSL 2176
L
Sbjct: 885 YEL 887
>gi|303229623|ref|ZP_07316411.1| DNA-directed DNA polymerase [Veillonella atypica ACS-134-V-Col7a]
gi|302515748|gb|EFL57702.1| DNA-directed DNA polymerase [Veillonella atypica ACS-134-V-Col7a]
Length = 884
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 237/467 (50%), Gaps = 40/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
C V A+ K L E L + NIE+PL++ L ME GI +D +
Sbjct: 455 CVSMVKALLAMDDAAVKALQDESLWDLYNNIELPLIHTLLVMEKNGIYIDPVKLEETTIK 514
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+ +L ++++ Y LAG F++ + + +L+ + LP+ + K K STD LD+
Sbjct: 515 FKAELEAVQQEIYELAGETFNINSPKQLGIILFEKMNLPVIK---KTKTGYSTDAEVLDM 571
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
LRHE PIV I +R++AKL++ + C + ++ + + +H + Q TATGRLS
Sbjct: 572 LRHESPIVEKILAYRSVAKLVS----TYCEGLAVLINPETHRIHTTFNQMVTATGRLSSS 627
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + E E+ R F P + L++ADYSQIELR++
Sbjct: 628 DPNLQNIPVRTE----------KGREI-------RALFYPGEGFDTLVSADYSQIELRIL 670
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D ALI + D+ AA G+S+D V S+ER K + +GI+YG+ L
Sbjct: 671 AHLSGDEALIKAFNDGK-DIHRFTAAEVLGKSQDEVTSEERSHAKAVNFGIIYGISDFGL 729
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S L + EAK I+ + S +P V ++ V H+ G V ++ GR R L I N
Sbjct: 730 SRDLGITRQEAKNYIELYFSRYPKVKEYMDNMVIEAHETGKVRTMFGRMRELPDINSRNF 789
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK+AM + SI+ +K RLLL
Sbjct: 790 NRRSFAERTAMNTPIQGTAADIIKLAMNKVESILEEKAFK---------------SRLLL 834
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
QVHDELVLEV + +L+++ MES L VPL+V + W
Sbjct: 835 QVHDELVLEVVNEELDAIQTLLKETMESIVELHVPLIVDVHNAENWA 881
>gi|359786182|ref|ZP_09289321.1| DNA polymerase I [Halomonas sp. GFAJ-1]
gi|359296551|gb|EHK60800.1| DNA polymerase I [Halomonas sp. GFAJ-1]
Length = 926
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 248/467 (53%), Gaps = 41/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSE-ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
C V T L +L + E L + L N+E+PL+NVL+ +E G+ +D E
Sbjct: 496 ACEDVDITLRLQEILRPQVEREGRLADVLDNLELPLINVLSRIERNGVALDAERLHAQSQ 555
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
L+ ++R LE +A+ LAG +F+L + + +L+ K+P+ + KG PST + L+
Sbjct: 556 QLESRIRELESQAFELAGREFNLGSPKQLGQILFEEQKIPVIKKTPKGA--PSTAEAVLE 613
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L ++P+ VI +HR LAKL + + L ++ +T + +H + Q TATGRLS
Sbjct: 614 ELALDYPLPKVIMQHRGLAKLKSTYTDKLPRL--LNKATGR--VHTSYHQAVTATGRLSS 669
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + E + KI R FI ++ + ++AADYSQIELR+
Sbjct: 670 SDPNLQNIPIRTE---------------EGRKI--RQAFI-ARPGYRIVAADYSQIELRI 711
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
MAH S+D L+ + D+ T AA G S D V +R K + +G++YGM
Sbjct: 712 MAHLSEDKGLLDAFADGR-DIHTATAAEVFGTSLDKVSGDQRRSAKAINFGLIYGMSAWG 770
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
LS QL+ N+A+ I + +PGVA ++ + + G+VE++ GR+ +L +I+ N
Sbjct: 771 LSRQLHIDRNQAQTYIDRYFDRYPGVARYMDRIRAQAAEDGFVETVLGRRLYLPEIQSQN 830
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
+ A+R A+N+ QG+AADIIK AMI++ + + G + ++
Sbjct: 831 RNRRQGAERTAINAPMQGTAADIIKQAMIDVDAWLAEGEFD---------------ALMV 875
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+QVHDELV EV + + VQ+ M+ AA L VPL+V+ + G+ W
Sbjct: 876 MQVHDELVFEVAEKQVDAFIEQVQQRMQGAAELKVPLIVEAESGANW 922
>gi|115424492|dbj|BAF33374.1| DNA polymerase I [Bacillus smithii]
Length = 876
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/521 (30%), Positives = 257/521 (49%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D+ + S+++ P + S ++ K A + + K R R+
Sbjct: 392 FDLLLASYLINPSESPSDFADVAKLHGFNEVQSDEAVYGKGAKLKLPDREIYEEHIARKA 451
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
L +L + + ++E+PL +LADME G+ VD++ + + L +L
Sbjct: 452 VGLTKLAETCRDVLKENDQLSLFYDLEMPLALILADMEWTGVKVDVDRLTEMGDELHNRL 511
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ +EK+ Y LAG +F++ + + ++L+ + LP+ + K K ST L+ L H
Sbjct: 512 QEIEKEIYELAGQEFNINSPKQLGHILFEKMGLPVIK---KTKTGYSTSADVLEKLESSH 568
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I E+R L KL + + + + + +T K +H + Q T TGRLS +PNLQ
Sbjct: 569 EIVRYILEYRQLGKLQSTYIDGLLKV--VHQNTHK--VHTRFNQALTQTGRLSSADPNLQ 624
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+++W++ +ADYSQIELR++AH S
Sbjct: 625 NIPIRLE---------------EGRKI--RQAFVPSEKDWVIFSADYSQIELRVLAHISG 667
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A ++ V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 DQKLIEAF-REDMDIHTKTAMDVFHVQKEEVTSNMRRQAKAVNFGIVYGISDYGLSQNLG 726
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA + I+ + +S+P V ++ V +KGYV +L R+R+L +I N +S
Sbjct: 727 ITRKEAGQFIERYFASYPDVKEYMDEIVREAKRKGYVTTLLHRRRYLPEITSRNFNVRSF 786
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +A + + + R+LLQVHDE
Sbjct: 787 AERTAMNTPIQGSAADIIKKAMID---------------MAERLKKEQLKSRMLLQVHDE 831
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ EV P I+ +V ME A L VPL V G TW
Sbjct: 832 LIFEVPPDEIETMKKIVPDVMEHAVELKVPLKVDYAYGPTW 872
>gi|421263814|ref|ZP_15714835.1| DNA polymerase I [Pasteurella multocida subsp. multocida str. P52VAC]
gi|401689101|gb|EJS84601.1| DNA polymerase I [Pasteurella multocida subsp. multocida str. P52VAC]
Length = 930
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 270/529 (51%), Gaps = 56/529 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D ++S++L + + N+++ K+ L + + +G+ K Q+ A
Sbjct: 445 DTMLLSYVL----DSTGRHNMDELAKRYLGHQTIHFEDIAGKGKAQLTFNQIPLEQAAEY 500
Query: 1708 CCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
T L VLW K+ EL++ +E+PL +VL+ +E G+ +D +
Sbjct: 501 AAEDADITMKLQQVLWEKVAAQPELVKLYQTMELPLASVLSRIERHGVLIDSDALFSQSQ 560
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+ +L LE++AY LAG +F+L + + +L+ L LP+ + KG PST++ L+
Sbjct: 561 QIGVRLTALEQQAYELAGQQFNLASTKQLQEILFDKLSLPVLKKTPKGA--PSTNEEVLE 618
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT--LHGHWLQTSTATGRL 1884
L +EH + ++ EHR L+KL + ++ + K T +H + Q TATGRL
Sbjct: 619 ELAYEHALPKILVEHRGLSKLKSTYTD------KLPLMVNKDTGRVHTSYHQAVTATGRL 672
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + + NE+ G R FI + E + ++AADYSQIEL
Sbjct: 673 SSSDPNLQNI------PIRNEE---GR--------RIRQAFI-APEGYQIMAADYSQIEL 714
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH S+D LI ++ D+ AA G V S++R K + +G++YGM
Sbjct: 715 RIMAHLSQDKGLINAFNEGK-DIHRSTAAEIFGIPLAQVSSEQRRSAKAINFGLIYGMSS 773
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QL +EA++ + + +PGV +++H + +GYV +L R+ +L I+
Sbjct: 774 FGLSRQLGIPRHEAQKYMDLYFQRYPGVQAFMHDIRETAKAQGYVTTLFDRRLYLPDIQS 833
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK AMI + I G +PD +
Sbjct: 834 SNAIRRKAAERVAINAPMQGTAADIIKRAMITLDREIAG---QPD-------------IK 877
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV I+ ++++ ME AA L+VPL+V + VG W
Sbjct: 878 MIMQVHDELVFEVRSDKIEHFRTIIKTTMEQAAQLVVPLIVDVGVGKNW 926
>gi|331269049|ref|YP_004395541.1| DNA polymerase I [Clostridium botulinum BKT015925]
gi|329125599|gb|AEB75544.1| DNA polymerase I [Clostridium botulinum BKT015925]
Length = 881
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/460 (31%), Positives = 238/460 (51%), Gaps = 45/460 (9%)
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
+ + L K + S + E N+E+PLV VLA ME G +D + + + K+ L
Sbjct: 461 KEIYEKLQKEIKSANMEELFYNVELPLVKVLASMECEGFKIDKDRLTEIGEKFKVKIETL 520
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
EK+ + A F++ + + +L+ L LP+ + K K ST+ L+ L+ HPI+
Sbjct: 521 EKEIHEFADEDFNIKSPKQLGKILFEKLDLPVIK---KTKTGYSTNAEVLEKLKDSHPII 577
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
I E+R + KL + + + + + +H + QT T TGRLS EPNLQ +
Sbjct: 578 SKIIEYRQITKLDSTYVEGLKHVI-----DEDGKIHSSFNQTVTTTGRLSSTEPNLQNIP 632
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
++++M E R F+P+ E ++ +ADYSQIELR++AH + D
Sbjct: 633 --IKYEMGRE---------------IRKVFVPNNEESVIFSADYSQIELRVLAHIANDEK 675
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
LI K H D+ T+ A+ D V R K + +GI+YG+G +LS+ +N S
Sbjct: 676 LIDAF-KHHKDIHTITASEVFKVHIDEVTPLMRSNAKAVNFGIVYGIGAFSLSKDINVSR 734
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
EAKE I ++ S +P V ++ +S Q G+V ++ RKR++ +++ N +S +R
Sbjct: 735 KEAKEYIDTYFSRYPNVKKYIDEIISKAEQDGFVTTIMNRKRYIPEVQSRNKIVRSFGER 794
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR--LLLQVHDEL 2133
A+N+ QGSAAD+IK+AM++++ +++K + L+LQVHDEL
Sbjct: 795 LAMNTPIQGSAADVIKLAMVHVYE-----------------ELIKRNLKSTLILQVHDEL 837
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+L V ++E +V ME LLVPL + VG+TW
Sbjct: 838 ILNVYKDELEEVKQMVVDKMEGVMNLLVPLEADVNVGTTW 877
>gi|119494050|ref|ZP_01624605.1| DNA polymerase I [Lyngbya sp. PCC 8106]
gi|119452218|gb|EAW33419.1| DNA polymerase I [Lyngbya sp. PCC 8106]
Length = 927
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 182/551 (33%), Positives = 271/551 (49%), Gaps = 78/551 (14%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRA------AHN 1706
D + S++L PDD NL + +K L S A + + + A A
Sbjct: 421 FDTMLASYVLNPDDSH----NLTELSRKYLDSGILAKSYKQLSLSKKQTIADLDIPTAAE 476
Query: 1707 GCCRRVAQTRALCSVLWKLLVS-EELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
C V T + L K L EL + LL+IE PL VLA+ME GI ++++ Q
Sbjct: 477 YCGLDVYATYLIVPKLRKELQDFPELHKLLLDIEQPLEPVLAEMEYQGIRINVDYLKQLS 536
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
+ L+KKL +EK+AY AG +F+L + ++ +L+ L+L + K K STD L
Sbjct: 537 SQLEKKLEEIEKQAYQEAGTEFNLGSPKQLSKLLFETLELSTKKSR-KTKTGYSTDAKVL 595
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L+ +HPI+ I EHRTLAKL + + ++ L + TQ+ +H + Q T TGRLS
Sbjct: 596 EKLKGDHPIIDSILEHRTLAKLKSTYVDALPEL--VHPQTQR--IHTDFNQAITTTGRLS 651
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
PNLQ + EF R F+P + W+L++ADYSQIELR
Sbjct: 652 SSNPNLQNIPIRTEFSR-----------------QIRQAFLP-EPGWLLVSADYSQIELR 693
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSED--SVGSQERDQTKRLIYGILYGMG 2003
++AH S +P L+ K + D+ T + A++ +D V +ER K + +G++YGMG
Sbjct: 694 ILAHLSDEPILVEAY-KTNRDIHT-VTAQFLFEKDDIKDVTPEERRFGKTINFGVIYGMG 751
Query: 2004 PNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF----- 2058
S ++ ++N+AKE I+ F + + +L +GYV +L GR+R+
Sbjct: 752 ALRFSREMKVNTNKAKEFIERFNQQYEKLFEYLEEQKKQAISQGYVTTLLGRRRYFHFES 811
Query: 2059 ----------LSKI------KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
L I K G N ++ R A N+ QGS+ADIIKIAM+ + ++
Sbjct: 812 PSLKALKESPLEDIPLDELKKIGQN--DAQFLRAAANAPIQGSSADIIKIAMVKLRDVL- 868
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
N+ R +LLLQVHDELV EV P +E +++ ME A L VP
Sbjct: 869 -----------QNY-----RAKLLLQVHDELVFEVPPEEWEELQPQIKQTMEDAYSLKVP 912
Query: 2163 LLVKIQVGSTW 2173
LLV I G W
Sbjct: 913 LLVDIHAGDNW 923
>gi|91203357|emb|CAJ71010.1| stongly similair to DNA polymerase I [Candidatus Kuenenia
stuttgartiensis]
Length = 887
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 202/688 (29%), Positives = 314/688 (45%), Gaps = 105/688 (15%)
Query: 1492 INASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKD 1551
IN F FL++ F D+ + + I GL+ WE YYV L
Sbjct: 296 INTIEQFHGFLEQISKKDAFAIDLE----TTGTDPLKAHIVGLSFSWEQKEAYYVPLMAP 351
Query: 1552 LWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQV 1611
+ H D ++ PE I +++E +K N+K + V
Sbjct: 352 ENTRHLTAD-----------IVLPE------------IRKVLEDESKKKIGQNIKYDLLV 388
Query: 1612 LKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSN 1671
LK N+G L ++ D I S++L P N
Sbjct: 389 LKK--------------------HNIG-----LKGIYF----DSMIASYLLNP---AKRN 416
Query: 1672 PNLEKEVKKRLSSEAAAAANRSGRWKNQ--MRRAAHNGCCRRVAQ----TRALCSVLWKL 1725
NL+ + LS + A G K Q M + + C+ Q T L + L
Sbjct: 417 HNLDDIAFEYLSYKTIMIAELIGSGKQQITMDKVPVDKVCQYACQDADITFRLAETMAPL 476
Query: 1726 LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
L E L + IEIPL+ VLA+ME GI ++ + Q L +L+ LEK+ Y +A
Sbjct: 477 LKKEGLWQLFQEIEIPLIYVLAEMEGNGICINADFLRQMSGDLAAQLQCLEKEIYRVAEQ 536
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLA 1845
+F++ + + +L+ +LP + K STD + L L HP+ + E+R LA
Sbjct: 537 EFNISSHKQLGAILFDKFQLP---KLRRTKTGVSTDANVLASLAWRHPLPKLALEYRQLA 593
Query: 1846 KLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNE 1905
KL + ++ +L ++ T K +H + QT T+TGRLS PNLQ +
Sbjct: 594 KLKSTYADALPNL--LNQDTGK--IHTTFNQTVTSTGRLSSSNPNLQNIP---------- 639
Query: 1906 DIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG 1965
+ D K R FIPS +N + L+ADYSQIELR++AHFS+D AL+ +
Sbjct: 640 ------VKTDIGK-QIRRAFIPSGKNAVFLSADYSQIELRILAHFSEDTALMEAF-REDL 691
Query: 1966 DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSF 2025
D+ +A+ ++V ++ R K + +GI+YG+ LS S N+AK+ I ++
Sbjct: 692 DIHAAVASSIYHVPLENVTTEMRRNAKAINFGIIYGLNEYGLSRDTGLSLNDAKDFIDAY 751
Query: 2026 KSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGS 2085
+ + GV + V + GYV++L RKR + I N + ++ A+R A+N+I QGS
Sbjct: 752 FTLYQGVREFRDKVVEEAKEMGYVKTLFNRKRAIPDINAKNKRFRNLAERIAINTIIQGS 811
Query: 2086 AADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEA 2145
AAD+IK+AM NI+S + G Y+ R+LLQ+HDEL+ EV +++
Sbjct: 812 AADLIKVAMNNIYSKLKCGDYE---------------ARMLLQIHDELLFEVGVQALEQT 856
Query: 2146 VSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+VQ+ M A L VP+ V I+ G W
Sbjct: 857 RIMVQEEMGHAVTLRVPVKVNIKTGKNW 884
>gi|421871274|ref|ZP_16302896.1| DNA polymerase I [Brevibacillus laterosporus GI-9]
gi|372459901|emb|CCF12445.1| DNA polymerase I [Brevibacillus laterosporus GI-9]
Length = 897
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 259/524 (49%), Gaps = 46/524 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D+ + S+++ + SNP L K S + A+ + G+ + +
Sbjct: 413 FDLFLASYLI---NASESNPTLSDATAKFSSVKVASDEDIYGKGAKRSLPSMELISEHVA 469
Query: 1713 AQTRALC-SVLW--KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
+ +AL SVL + L + +L E IE PL VLADME G+ ++ E Q L
Sbjct: 470 RKAQALWQSVLQAKEELTANQLTELYTKIEQPLSLVLADMEEIGVLINQEQLHQMGEELD 529
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
K+L+ L +K Y AG F++ + + +L+ + +P PE K K ST L+ L
Sbjct: 530 KQLKALTEKIYEQAGTTFNINSPKQLGEILFERMGIP-PE--KKTKTGYSTSADVLEKLA 586
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
++PIV I +R L KL + + + L I T + +H + Q +TATGRLS EP
Sbjct: 587 QKYPIVIDILTYRQLGKLRSTYIEGL--LKEIHGKTGR--VHTRFNQATTATGRLSSTEP 642
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + +E + KI R F+P+ +N +LAADYSQIELR++AH
Sbjct: 643 NLQNIPIRLE---------------EGRKI--RKAFVPTNDNCYILAADYSQIELRILAH 685
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
SKDP LI + D+ T A G SED V S R Q K + +GI+YG+ LS+
Sbjct: 686 ISKDPNLIEAFVN-NMDIHTRTAMDVFGVSEDEVTSNMRRQAKAVNFGIVYGISDFGLSQ 744
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
LN EA E I + F GV +++ + GYV +L R+R+L I N
Sbjct: 745 NLNIPRKEAAEFIARYFDVFSGVQNYMEEIKHQAKKDGYVTTLLHRRRYLPDIASRNFNL 804
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S A+R A+N+ QG+AADIIK+AMI + +V K R+LLQV
Sbjct: 805 RSFAERTAMNTPIQGTAADIIKLAMIQMQEALVRNQLK---------------SRMLLQV 849
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDELV EV ++ LV ME+A L VPL V + G TW
Sbjct: 850 HDELVFEVPEDELETMQKLVANVMENALKLDVPLKVDVNYGETW 893
>gi|365158108|ref|ZP_09354349.1| DNA polymerase I [Bacillus smithii 7_3_47FAA]
gi|363621937|gb|EHL73119.1| DNA polymerase I [Bacillus smithii 7_3_47FAA]
Length = 876
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/521 (30%), Positives = 257/521 (49%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D+ + S+++ P + S ++ K A + + K R R+
Sbjct: 392 FDLLLASYLINPSESPSDFADVAKLHGFNEVQSDEAVYGKGAKLKLPDREIYEEHIARKA 451
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
L +L + + ++E+PL +LADME G+ VD++ + + L +L
Sbjct: 452 VGLTKLAETCRDVLKENDQLSLFYDLEMPLALILADMEWTGVKVDVDRLTEMGDELHNRL 511
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ +EK+ Y LAG +F++ + + ++L+ + LP+ + K K ST L+ L H
Sbjct: 512 QEIEKEIYELAGQEFNINSPKQLGHILFEKMGLPVIK---KTKTGYSTSADVLEKLESSH 568
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I E+R L KL + + + + + +T K +H + Q T TGRLS +PNLQ
Sbjct: 569 EIVRYILEYRQLGKLQSTYIDGLLKV--VHQNTHK--VHTRFNQALTQTGRLSSADPNLQ 624
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+++W++ +ADYSQIELR++AH S
Sbjct: 625 NIPIRLE---------------EGRKI--RQAFVPSEKDWVIFSADYSQIELRVLAHISG 667
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A ++ V S R Q K + +GI+YG+ LS+ L
Sbjct: 668 DQKLIEAF-REDMDIHTKTAMDVFHVQKEEVTSNMRRQAKAVNFGIVYGISDYGLSQNLG 726
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA + I+ + +S+P V ++ V +KGYV +L R+R+L +I N +S
Sbjct: 727 ITRKEAGQFIERYFASYPDVKEYMDEIVREAKRKGYVTTLLHRRRYLPEITSRNFNVRSF 786
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +A + + + R+LLQVHDE
Sbjct: 787 AERTAMNTPIQGSAADIIKKAMID---------------MAERLKKEQLKSRMLLQVHDE 831
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ EV P I+ +V ME A L VPL V G TW
Sbjct: 832 LIFEVPPDEIETMKKIVPDVMEHAVELKVPLKVDYAYGPTW 872
>gi|206900363|ref|YP_002250598.1| DNA polymerase I [Dictyoglomus thermophilum H-6-12]
gi|38146985|gb|AAR11877.1| DNA polymerase I [Dictyoglomus thermophilum]
gi|206739466|gb|ACI18524.1| DNA polymerase I [Dictyoglomus thermophilum H-6-12]
Length = 856
Score = 235 bits (600), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 247/460 (53%), Gaps = 41/460 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L S+L + + +E L L NIEIPL+ VL ME WGI VD E Q + ++++ LE+
Sbjct: 438 LKSILEERIKNEGLEFVLYNIEIPLIPVLYSMEKWGIKVDKEYLKQLSDEFCERIKKLEE 497
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ Y LAG +F+L + ++ VL+ LKLP KGK ST L L + HPIV
Sbjct: 498 EIYELAGTRFNLNSPKQLSEVLFERLKLP---SGKKGKTGYSTSSSVLQNLINAHPIVRK 554
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I ++R L KL + + +I +L ++ Q +H + T TATGR+S EPNLQ +
Sbjct: 555 ILQYRELYKLKSTYVDAIPNL----VNPQTGRVHTKFNPTGTATGRISSSEPNLQNIPIK 610
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
E + KI R F+ S++ + L++ DYSQIELR+MAH S++P LI
Sbjct: 611 SE---------------EGRKI--RRAFV-SEDGYFLVSLDYSQIELRIMAHLSQEPKLI 652
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
K D+ A+ G E+ V R + K + +GI+YG+ LSE ++ + E
Sbjct: 653 SAFQKGE-DIHRRTASEIFGVPEEEVDDLLRSRAKAVNFGIIYGISSFGLSETVSITPEE 711
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
A++ I S+ +P V ++ + +K YV++L GRKR++ +IK N + ++ +R A
Sbjct: 712 AEKFIDSYFKHYPRVKLFIDKTIHEAREKLYVKTLFGRKRYIPEIKSINKQVRNAYERIA 771
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+N+ QG+AADIIK+AMI I+ I K R+LLQ+HDEL+LEV
Sbjct: 772 INAPIQGTAADIIKLAMIEIYKEIENKNLK---------------SRILLQIHDELILEV 816
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
++ + ++ ME L VPL+V+I VG L+
Sbjct: 817 PEEEMEFTPLMAKEKMEKVVELSVPLVVEISVGKNLAELK 856
>gi|418517767|ref|ZP_13083925.1| DNA polymerase I [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|410705480|gb|EKQ63952.1| DNA polymerase I [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 934
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 234/460 (50%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L SE +E + +IE+PLV+VLA +E G+ VD + L K++
Sbjct: 511 TLRLHRVLGPRLASEPGLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 570
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 571 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 628
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 629 LPRVILEYRGLTKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 684
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P L+A DYSQIELR+MAH S D
Sbjct: 685 IPIRTE---------------DGRRIR-RAFVAPPGRK--LIACDYSQIELRIMAHLSGD 726
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G DV AA GR+ D+V + ER K + +G++YGM L+ QL
Sbjct: 727 PGLVGAFES-GADVHRATAAEVFGRTIDTVSADERRAAKAINFGLMYGMSAFGLARQLGI 785
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 786 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 845
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+ + D +A + Q R +++LQVHDEL
Sbjct: 846 ERAAINAPMQGTAADIIKRAMVKV-----------DGWIADHAQ----RAKMILQVHDEL 890
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M AA L VPL+V VG W
Sbjct: 891 VFEADIDFVDTLLSEVTTRMAGAAELRVPLVVDSGVGDNW 930
>gi|390990081|ref|ZP_10260372.1| DNA polymerase I [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|372555183|emb|CCF67347.1| DNA polymerase I [Xanthomonas axonopodis pv. punicae str. LMG 859]
Length = 934
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 234/460 (50%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L SE +E + +IE+PLV+VLA +E G+ VD + L K++
Sbjct: 511 TLRLHRVLGPRLTSEPGLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 570
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 571 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 628
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 629 LPRVILEYRGLTKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 684
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P L+A DYSQIELR+MAH S D
Sbjct: 685 IPIRTE---------------DGRRIR-RAFVAPPGRK--LIACDYSQIELRIMAHLSGD 726
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G DV AA GR+ D+V + ER K + +G++YGM L+ QL
Sbjct: 727 PGLVGAFES-GADVHRATAAEVFGRTIDTVSADERRAAKAINFGLMYGMSAFGLARQLGI 785
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 786 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 845
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+ + D +A + Q R +++LQVHDEL
Sbjct: 846 ERAAINAPMQGTAADIIKRAMVKV-----------DGWIADHAQ----RAKMILQVHDEL 890
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M AA L VPL+V VG W
Sbjct: 891 VFEADIDFVDTLLSEVTTRMAGAAELRVPLVVDSGVGDNW 930
>gi|339499087|ref|YP_004697122.1| DNA polymerase I [Spirochaeta caldaria DSM 7334]
gi|338833436|gb|AEJ18614.1| DNA polymerase I [Spirochaeta caldaria DSM 7334]
Length = 984
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/470 (32%), Positives = 244/470 (51%), Gaps = 44/470 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
C T + ++L L + ++ N+E+PL+ +L++ME GI ++ E
Sbjct: 557 SCEDADYTLRMKAILEPTLQAMGCLDLFRNLEMPLLPILSEMEGRGIKIEAEVLRSYGKE 616
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L +LR +EK Y L G +F++ + + +VL+ KL + K K STD L+
Sbjct: 617 LAGELRSIEKSIYELVGHEFNIASTKQLQDVLFKERKL---QASKKTKTGYSTDVAVLEE 673
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L E P+ I +RTLAKL + + ++ A + LH H++QT TATGRLS
Sbjct: 674 LAREDPVPAYILRYRTLAKLKSTYVDTLADQA-----GRDGRLHTHFVQTGTATGRLSSR 728
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + D R F+ ++ +L++ADYSQIEL ++
Sbjct: 729 DPNLQNIPIR-----------------DEEGRRIRQAFV-AEPGTLLISADYSQIELVVL 770
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S+DP LI K DV A+ G ED V S++R K + +G++YGM L
Sbjct: 771 AHLSQDPGLIEAFLK-GVDVHRRTASLIFGVPEDQVSSEQRRIAKTINFGVMYGMSAFRL 829
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S +L S EA+ I ++ +++ G+ S++ + + GY +++ GR+R++ I N
Sbjct: 830 SNELGISRTEAQTFINTYFTTYKGIRSFIDTTIQETERTGYSQTILGRRRYIPTINSRNK 889
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR-CRLL 2126
EK+ A+R A+N+ QGSAADI+K+AMI + D +L KG ++L
Sbjct: 890 TEKAAAERVAINTPIQGSAADIVKLAMIRL-----------DRALRK-----KGNPAQML 933
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
LQVHDEL+LE ++ +E LV++ ME A +L VPL V ++ G WG
Sbjct: 934 LQVHDELILECPEALAEETARLVKEEMEQAIVLRVPLRVSVETGKRWGDF 983
>gi|292669881|ref|ZP_06603307.1| DNA-directed DNA polymerase I [Selenomonas noxia ATCC 43541]
gi|292648678|gb|EFF66650.1| DNA-directed DNA polymerase I [Selenomonas noxia ATCC 43541]
Length = 876
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 256/527 (48%), Gaps = 56/527 (10%)
Query: 1651 DGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D D+ + ++L P++ R ++E+ A A A+ S + +
Sbjct: 400 DAFDLELGDYLLHPEESRR---DIERTAFALCGDAAEAPADLSDEQRAE----------- 445
Query: 1711 RVAQTRA-LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
R AQ A L S L L L+ ++E+PLV VLA ME GI V+ + R
Sbjct: 446 REAQLAARLHSPLQAALAEAGLLPLYQDVELPLVPVLAAMEQTGIYVNRTALERERAAAN 505
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
++ L ++ + LAGM+F++ + + VL+ L+L K K ST+ L+ LR
Sbjct: 506 ARIDALAEEIHALAGMEFNISSPKQLGEVLFERLELAAGTKIKKTKTGYSTNAETLEELR 565
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
HPIV + +R KL + L I +L R + + YT ++ QT TATGRLS +P
Sbjct: 566 DRHPIVDKVLTYRMWTKLRSTYLDGIGALIRPE-TGRVYT---NFNQTVTATGRLSSSDP 621
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + E G A R F P + +LL+ADYSQIELR++AH
Sbjct: 622 NLQNIPVRTE---------EGRA--------VRALFEPGEGYDVLLSADYSQIELRILAH 664
Query: 1950 FSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
S D LI HG D+ AA G D+V ++R + K + +GI+YG+ LS
Sbjct: 665 MSGDATLIDAFR--HGQDIHARTAAEVFGVPIDAVTGEQRRRAKAVNFGIVYGLSDYGLS 722
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
L EA I+ + + GV +L V+ H GYV +L GR+R LS I N
Sbjct: 723 RDLRIPRKEAAGYIERYFERYHGVREFLDKTVADAHANGYVTTLYGRRRELSAINSRNYM 782
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSII-VGGVYKPDSSLAANFQMLKGRCRLLL 2127
++S A+R A+N+ QG+AAD+IKIAMI H + GV + R+LL
Sbjct: 783 QRSFAERMAMNTPIQGTAADLIKIAMIRAHDALHAAGV----------------KSRILL 826
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
QVHDELVLE + I + L++ M AA L VPL V + +G W
Sbjct: 827 QVHDELVLEAAEAEIAQVSGLLRTAMSGAAELAVPLAVDVHIGKNWA 873
>gi|58583863|ref|YP_202879.1| DNA polymerase I [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84625661|ref|YP_453033.1| DNA polymerase I [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58428457|gb|AAW77494.1| DNA polymerase I [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84369601|dbj|BAE70759.1| DNA polymerase I [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 933
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 236/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L +E +E + +IE+PLV+VLA +E G+ VD + L K++
Sbjct: 510 TLRLHHVLGPKLAAEPGLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 569
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 570 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEDALEAIADQHE 627
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L+KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 628 LPRVILEYRGLSKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 683
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P L+A DYSQIELR+MAH S D
Sbjct: 684 IPIRTE---------------DGRRIR-RAFVAPPGRK--LIACDYSQIELRIMAHLSGD 725
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G + DV AA GR+ D+V ER K + +G++YGM L+ QL
Sbjct: 726 PGLVGAFAS-GTDVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGI 784
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 785 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 844
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+ + D +A + Q R +++LQVHDEL
Sbjct: 845 ERAAINAPMQGTAADIIKRAMVKV-----------DGWIADHAQ----RAKMILQVHDEL 889
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M SAA L VPL+V VG W
Sbjct: 890 VFEADVDFVDTLLSEVTTRMASAAELRVPLVVDSGVGDDW 929
>gi|381172148|ref|ZP_09881282.1| DNA polymerase I [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|380687415|emb|CCG37769.1| DNA polymerase I [Xanthomonas citri pv. mangiferaeindicae LMG 941]
Length = 934
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 234/460 (50%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L SE +E + +IE+PLV+VLA +E G+ VD + L K++
Sbjct: 511 TLRLHRVLGPRLASEPGLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 570
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 571 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 628
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 629 LPRVILEYRGLTKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 684
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P L+A DYSQIELR+MAH S D
Sbjct: 685 IPIRTE---------------DGRRIR-RAFVAPPGRK--LIACDYSQIELRIMAHLSGD 726
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G DV AA GR+ D+V + ER K + +G++YGM L+ QL
Sbjct: 727 PGLVGAFES-GADVHRATAAEVFGRTIDTVSADERRAAKAINFGLMYGMSAFGLARQLGI 785
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 786 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 845
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+ + D +A + Q R +++LQVHDEL
Sbjct: 846 ERAAINAPMQGTAADIIKRAMVKV-----------DGWIADHAQ----RAKMILQVHDEL 890
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M AA L VPL+V VG W
Sbjct: 891 VFEADIDFVDTLLSEVTTRMAGAAELRVPLVVDSGVGDNW 930
>gi|217967271|ref|YP_002352777.1| DNA polymerase I [Dictyoglomus turgidum DSM 6724]
gi|217336370|gb|ACK42163.1| DNA polymerase I [Dictyoglomus turgidum DSM 6724]
Length = 855
Score = 235 bits (599), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 247/460 (53%), Gaps = 41/460 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L ++L + + EEL L NIE PL+ VL ME WGI VD E + ++++ LE+
Sbjct: 437 LKTILEERIKKEELEFVLFNIETPLIPVLYSMEKWGIKVDKEYLKSLSDEFCERIKKLEE 496
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ Y LAGMKF+L + ++ VL+ LKLP KGK ST L L + HPIV
Sbjct: 497 EIYELAGMKFNLNSPKQLSEVLFERLKLP---SGKKGKTGYSTSSLVLQNLLNAHPIVIK 553
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I ++R L KL + + +I +L +++Q +H + T TATGR+S EPNLQ +
Sbjct: 554 ILQYRELYKLKSTYIDAIPNL----INSQTGRVHTKFNPTGTATGRISSSEPNLQNIPIK 609
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
E + KI R FI + + + ++ DYSQIELR+MAH S++P LI
Sbjct: 610 SE---------------EGRKI--RRAFI-ADDGYYFVSLDYSQIELRIMAHLSQEPKLI 651
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
K D+ AA G ED V R + K + +GI+YG+ LSE + + E
Sbjct: 652 SAFQKGE-DIHRRTAAEIFGVPEDEVDDLLRSRAKAVNFGIIYGISSFGLSETASITPEE 710
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
A++ I S+ +P V ++ + +K YV++L GRKR++ +I+ N + ++ +R A
Sbjct: 711 AEKFIDSYFKHYPRVKLFIDKTIYEAREKLYVKTLFGRKRYIPEIRSINKQVRNAYERIA 770
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+N+ QG+AADIIK+AMI I+ I + +L + R+LLQ+HDEL+LEV
Sbjct: 771 INAPIQGTAADIIKLAMIEIYKEI------EEKNL---------KSRILLQIHDELILEV 815
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
++ + ++ ME L VPL+V+I VG L+
Sbjct: 816 PEEEMEFTPLMAKEKMEKVVELSVPLVVEISVGKNLAELK 855
>gi|294791734|ref|ZP_06756882.1| DNA polymerase I [Veillonella sp. 6_1_27]
gi|294456964|gb|EFG25326.1| DNA polymerase I [Veillonella sp. 6_1_27]
Length = 877
Score = 235 bits (599), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 236/467 (50%), Gaps = 40/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
C V A+ V + EEL IE+PL++ L ME GI +D E +
Sbjct: 448 CVSMVKALLAMNEVACESARREELWSLYETIELPLIHTLVVMEKNGIYIDTEKLAETTAR 507
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+++L ++++ Y LAG F++ + + +L+ +KLPI + K K STD LD+
Sbjct: 508 FKEELTQVQEEIYELAGETFNINSPKQLGVILFEKMKLPIIK---KTKTGYSTDAEVLDM 564
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
LRHE PIV I +R++AKL++ + C + ++ + + +H + Q TATGRLS
Sbjct: 565 LRHESPIVEKILAYRSVAKLVS----TYCEGLAVLINDKTHRIHTTFNQMVTATGRLSSS 620
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + E +I R F P L++ADYSQIELR++
Sbjct: 621 DPNLQNIPVRTE---KGREI--------------RALFYPGTGYDTLVSADYSQIELRIL 663
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D ALI + D+ AA G+S+D V S+ER K + +GI+YG+ L
Sbjct: 664 AHLSGDEALIKAFVEGK-DIHRFTAAEVLGKSQDEVTSEERSHAKAINFGIIYGISDFGL 722
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S L + EAK I + S +P V ++ V H+ G V ++ GR+R L I N
Sbjct: 723 SRDLGITRGEAKNYIDLYFSRYPKVKEYMDRMVQEAHETGKVRTMFGRQRELPDINSRNF 782
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK+AM + + NF RLLL
Sbjct: 783 NRRSFAERTAMNTPIQGTAADIIKLAMNQVEQKLE----------EQNFT-----SRLLL 827
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
QVHDELVLEV S ++ L++ M+S L VPL+V + W
Sbjct: 828 QVHDELVLEVVNSELEAIEELLRSTMQSVVELQVPLIVDVHHAENWA 874
>gi|384044663|ref|YP_005492680.1| DNA polymerase I [Bacillus megaterium WSH-002]
gi|345442354|gb|AEN87371.1| DNA polymerase I [Bacillus megaterium WSH-002]
Length = 875
Score = 235 bits (599), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 182/525 (34%), Positives = 261/525 (49%), Gaps = 50/525 (9%)
Query: 1654 DMCIVSWILWP---DDERSSNPNLEKEVKKRLSSEA--AAAANRSGRWKNQMRRAAHNGC 1708
D+ I S+IL P +D+ ++ L K + S EA A RS +Q+ A H
Sbjct: 392 DVMIASYILNPAESNDDLATIAKL-KGYHQVQSDEAVYGKGAKRSIAEADQL--AEH--V 446
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
R+ A L +L K LV E E +E+PL VLADME G+ +D + L
Sbjct: 447 TRKAAAVAYLKELLEKELVENEQFELFEKLEMPLAIVLADMEYQGVKIDRAHLDEMGEDL 506
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
++KL +E K Y AG +F++ + + VL+ ++LP+ + K K ST L+ L
Sbjct: 507 REKLEKIEAKIYEYAGQEFNINSPKQLGVVLFEKMQLPVIK---KTKTGYSTSADVLEQL 563
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
H I+P I ++R L KL + + + + I S K +H + QT T TGRLS +
Sbjct: 564 ASAHDIIPEILQYRQLGKLQSTYIEGLKKV--IHESDGK--VHTRFNQTLTQTGRLSSVD 619
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + +E + KI R F+PSQ +W++ AADYSQIELR++A
Sbjct: 620 PNLQNIPIRLE---------------EGKKI--RGAFVPSQPDWLIFAADYSQIELRVLA 662
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H + D LI K D+ T A + V S R Q K + +GI+YG+ LS
Sbjct: 663 HIADDEKLIDAF-KHDLDIHTKTAMDVFHVEREEVTSNMRRQAKAVNFGIVYGISDYGLS 721
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
+ L + A I+ + SFPGV ++ V +KGYV +L R+R+L +I N
Sbjct: 722 QSLGITRKAAATFIERYLKSFPGVQEYMDTIVRDAKEKGYVTTLLHRRRYLPEITSRNFN 781
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+S A+R A+N+ QG+AADIIK AMI + + D +L A +LLLQ
Sbjct: 782 LRSFAERTAMNTPIQGTAADIIKKAMIEMDKRL------KDENLQA---------KLLLQ 826
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VHDEL+ E IK +V + ME A L VPL V G TW
Sbjct: 827 VHDELIFEAPEEEIKILEKIVPEVMEHALELEVPLKVDYSYGKTW 871
>gi|122920421|pdb|2HHW|A Chain A, Ddttp:o6-Methyl-Guanine Pair In The Polymerase Active Site,
In The Closed Conformation
gi|122920422|pdb|2HHW|D Chain D, Ddttp:o6-Methyl-Guanine Pair In The Polymerase Active Site,
In The Closed Conformation
Length = 580
Score = 235 bits (599), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 231/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 178 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 237
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 238 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 294
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R +T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 295 LLKVVR--PATKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 335
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 336 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 392
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + YGI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 393 IFQVSEDEVTPNMRRQAKAVNYGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 452
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 453 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 512
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 513 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 557
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 558 QAVTLRVPLKVDYHYGSTW 576
>gi|339007842|ref|ZP_08640416.1| DNA polymerase I [Brevibacillus laterosporus LMG 15441]
gi|338775045|gb|EGP34574.1| DNA polymerase I [Brevibacillus laterosporus LMG 15441]
Length = 897
Score = 234 bits (598), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 258/524 (49%), Gaps = 46/524 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D+ + S+++ + SNP L K S + A+ + G+ + +
Sbjct: 413 FDLFLASYLI---NASESNPTLSDATAKFSSVKVASDEDIYGKGAKRSLPSMELISEHVA 469
Query: 1713 AQTRALC-SVLW--KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
+ +AL SVL + L + +L E IE PL VLADME G+ ++ E Q L
Sbjct: 470 RKAQALWQSVLQAKEELTANQLTELYTKIEQPLSLVLADMEEIGVLINQEQLHQMGEELD 529
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
K+L L +K Y AG F++ + + +L+ + +P PE K K ST L+ L
Sbjct: 530 KQLEALTEKIYEQAGTTFNINSPKQLGEILFERMGIP-PE--KKTKTGYSTSADVLEKLA 586
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
++PIV I +R L KL + + + L I T + +H + Q +TATGRLS EP
Sbjct: 587 QKYPIVIDILTYRQLGKLRSTYIEGL--LKEIHGKTGR--VHTRFNQATTATGRLSSTEP 642
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + +E + KI R F+P+ +N +LAADYSQIELR++AH
Sbjct: 643 NLQNIPIRLE---------------EGRKI--RKAFVPTNDNCYILAADYSQIELRILAH 685
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
SKDP LI + D+ T A G SED V S R Q K + +GI+YG+ LS+
Sbjct: 686 ISKDPNLIDAFVN-NMDIHTRTAMDVFGVSEDEVTSNMRRQAKAVNFGIVYGISDFGLSQ 744
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
LN EA E I + F GV +++ + GYV +L R+R+L I N
Sbjct: 745 NLNIPRKEAAEFIARYFDVFSGVQNYMEEIKHQAKKDGYVTTLLHRRRYLPDIASRNFNL 804
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S A+R A+N+ QG+AADIIK+AMI + +V K R+LLQV
Sbjct: 805 RSFAERTAMNTPIQGTAADIIKLAMIQMQEALVRNQLK---------------SRMLLQV 849
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDELV EV ++ LV ME+A L VPL V + G TW
Sbjct: 850 HDELVFEVPEDELETMQKLVANVMENALKLDVPLKVDVNYGETW 893
>gi|384417449|ref|YP_005626809.1| DNA polymerase I [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353460363|gb|AEQ94642.1| DNA polymerase I [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 933
Score = 234 bits (598), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 235/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L +E +E + +IE+PLV+VLA +E G+ VD + L K++
Sbjct: 510 TLRLHHVLGPKLAAEPGLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 569
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 570 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 627
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 628 LPRVILEYRGLTKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 683
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P L+A DYSQIELR+MAH S D
Sbjct: 684 IPIRTE---------------DGRRIR-RAFVAPPGRK--LIACDYSQIELRIMAHLSGD 725
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G + DV AA GR+ D+V ER K + +G++YGM L+ QL
Sbjct: 726 PGLVGAFAS-GTDVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGI 784
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 785 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 844
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+ + D +A + Q R +++LQVHDEL
Sbjct: 845 ERAAINAPMQGTAADIIKRAMVKV-----------DGWIADHAQ----RAKMILQVHDEL 889
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M SAA L VPL+V VG W
Sbjct: 890 VFEADVDFVDTLLSEVTTRMASAAELRVPLVVDSGVGDDW 929
>gi|188574814|ref|YP_001911743.1| DNA polymerase I [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188519266|gb|ACD57211.1| DNA polymerase I [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 933
Score = 234 bits (598), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 236/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L +E +E + +IE+PLV+VLA +E G+ VD + L K++
Sbjct: 510 TLRLHHVLGPKLAAEPGLERVYRDIEMPLVDVLARIEANGVCVDAAELRRQSADLSKRML 569
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 570 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEDALEAIADQHE 627
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L+KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 628 LPRVILEYRGLSKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 683
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P L+A DYSQIELR+MAH S D
Sbjct: 684 IPIRTE---------------DGRRIR-RAFVAPPGRK--LIACDYSQIELRIMAHLSGD 725
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G + DV AA GR+ D+V ER K + +G++YGM L+ QL
Sbjct: 726 PGLVGAFAS-GTDVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGI 784
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 785 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 844
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+ + D +A + Q R +++LQVHDEL
Sbjct: 845 ERAAINAPMQGTAADIIKRAMVKV-----------DGWIADHAQ----RAKMILQVHDEL 889
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M SAA L VPL+V VG W
Sbjct: 890 VFEADVDFVDTLLSEVTTRMASAAELRVPLVVDSGVGDDW 929
>gi|122920458|pdb|2HVH|A Chain A, Ddctp:o6meg Pair In The Polymerase Active Site (0 Position)
gi|122920459|pdb|2HVH|D Chain D, Ddctp:o6meg Pair In The Polymerase Active Site (0 Position)
gi|122920465|pdb|2HVI|A Chain A, Ddctp:g Pair In The Polymerase Active Site (0 Position)
gi|122920466|pdb|2HVI|D Chain D, Ddctp:g Pair In The Polymerase Active Site (0 Position)
gi|266618524|pdb|3EZ5|A Chain A, Cocrystal Structure Of Bacillus Fragment Dna Polymerase I
With Duplex Dna , Dctp, And Zinc (Closed Form).
gi|266618525|pdb|3EZ5|D Chain D, Cocrystal Structure Of Bacillus Fragment Dna Polymerase I
With Duplex Dna , Dctp, And Zinc (Closed Form)
Length = 580
Score = 234 bits (598), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 231/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 178 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 237
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 238 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 294
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R +T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 295 LLKVVR--PATKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 335
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 336 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 392
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + YGI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 393 IFQVSEDEVTPNMRRQAKAVNYGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 452
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 453 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 512
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 513 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 557
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 558 QAVTLRVPLKVDYHYGSTW 576
>gi|302390192|ref|YP_003826013.1| DNA polymerase I [Thermosediminibacter oceani DSM 16646]
gi|302200820|gb|ADL08390.1| DNA polymerase I [Thermosediminibacter oceani DSM 16646]
Length = 864
Score = 234 bits (598), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 245/464 (52%), Gaps = 40/464 (8%)
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
RRVA L ++ + L S + E +E+PL VL+DME+ GI VD E
Sbjct: 437 RRVAYLIPLKEIMSEKLKSCAMEELFFGVEMPLSFVLSDMEMTGIKVDPEKLESLSREFG 496
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
+KL L + Y LAG++F++ + + VL+ L LP+ + K K STD L+ L+
Sbjct: 497 EKLEELTGEIYRLAGVEFNINSPKQLGEVLFEKLNLPVIK---KKKSGYSTDAEVLEKLK 553
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
+ HP+V I E+R L K+ + + LA + ST Y +H ++ QT TATGR+S EP
Sbjct: 554 NAHPVVEKILEYRFLMKMKSTYADGL--LALVDKST--YRIHSNFNQTITATGRISSTEP 609
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + + D + R F+ +LL+ DYSQIELR++AH
Sbjct: 610 NLQNIP----------------VKTDIGR-KIRGVFVAESPEHVLLSGDYSQIELRVLAH 652
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
S D LI K D+ T A+ G + V RD+ K + +GI+YG+ L++
Sbjct: 653 LSGDEGLIEAFIKGE-DIHTRTASEVFGVPPEQVTPLLRDRAKAVNFGIIYGISDYGLAQ 711
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
L S+ EA+E I+++ + +P V ++ + + GYV ++ R+R++ +I N
Sbjct: 712 NLGISTAEAREYIENYLNRYPKVRDYIRETIRNARMSGYVTTILNRRRYIPEINSRNYNL 771
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S A+R A+N+ QGSAADIIK+AM+ I + +F+ + ++L+QV
Sbjct: 772 RSFAERVAMNTPIQGSAADIIKVAMVKITN---------------HFREYGLKAKMLIQV 816
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDEL+ +V S ++ ++V+ ME+A L VPL+V + G TW
Sbjct: 817 HDELIFDVPKSELEVVKNIVKDDMENAIPLKVPLVVDFKEGYTW 860
>gi|23099618|ref|NP_693084.1| DNA polymerase I [Oceanobacillus iheyensis HTE831]
gi|22777848|dbj|BAC14119.1| DNA polymerase I [Oceanobacillus iheyensis HTE831]
Length = 880
Score = 234 bits (598), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 169/502 (33%), Positives = 253/502 (50%), Gaps = 57/502 (11%)
Query: 1688 AAANRSGRWKNQMRRAAH-NGCCRRVAQTRAL-------CSVLWKLL--VSEEL-----I 1732
A ANR R Q G ++V + L +L+ L + EEL
Sbjct: 416 AIANRKSRSDVQFDEEVFGKGAKQKVPEADVLNEHVVRKTQLLFDLYPEMEEELGNNEQY 475
Query: 1733 EALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTA 1792
E L +E+PL +LA++E +G+ VD++ L+++L LE++ Y LAG F+L +
Sbjct: 476 ELLKELEMPLALILAEVEHYGVQVDIDKLKDMGEDLKERLSTLEQEVYELAGETFNLNSP 535
Query: 1793 ADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTL 1852
+ +L+ L LP+ + K K ST L+ L +EH I+P + +R L KL + +
Sbjct: 536 KQLGPILFEKLGLPVIK---KTKTGYSTAADVLEQLENEHDIIPKLLMYRQLGKLQSTYI 592
Query: 1853 GSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNA 1912
+ + R S +H + Q T TGRLS EPNLQ + +E
Sbjct: 593 EGLLKVVRKDTSR----IHTRYNQALTQTGRLSSIEPNLQNIPIRLE------------- 635
Query: 1913 EVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIA 1972
+ KI R F+PS++NWI+ AADYSQIELR++AH + D LI K D+ T A
Sbjct: 636 --EGRKI--RQAFVPSKDNWIMFAADYSQIELRVLAHIAGDEKLIKAF-KEDTDIHTQTA 690
Query: 1973 ARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGV 2032
D V S R Q K + +GI+YG+ LS+ L + EAK+ I+ + +S+PGV
Sbjct: 691 MDVFHVESDEVTSNMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAKKFIERYFNSYPGV 750
Query: 2033 ASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKI 2092
+++ V KG+V ++ R+R+L I N +S A+R A+N+ QGSAADIIK
Sbjct: 751 KTYMDEIVQEAKHKGFVSTIMKRRRYLPDITSRNFNMRSFAERTAMNTPIQGSAADIIKK 810
Query: 2093 AMINI-HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQK 2151
AMI++ H + + +L AN +LLQVHDEL+LE + I + +V
Sbjct: 811 AMIDLDHRL-------KEENLQAN---------VLLQVHDELILEAPENEIDKLKEIVPD 854
Query: 2152 CMESAALLLVPLLVKIQVGSTW 2173
ME+ L VPL V G +W
Sbjct: 855 VMENTVELDVPLKVDYSFGKSW 876
>gi|371777453|ref|ZP_09483775.1| DNA polymerase I [Anaerophaga sp. HS1]
Length = 921
Score = 234 bits (598), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 241/484 (49%), Gaps = 42/484 (8%)
Query: 1694 GRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSE----ELIEALLNIEIPLVNVLADM 1749
G+ + MR+ N + + L K L+ E L +IE+PL+ VLA+M
Sbjct: 472 GKNQKSMRQVDINVVAEYAGEDADITFQLKKTLLEELKKYHLTSLFWDIEMPLIKVLAEM 531
Query: 1750 ELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPE 1809
E G+ +D + + LQ ++ LE AG +F++ + + VL+ L L
Sbjct: 532 EFAGVCLDTDALKKYALELQDRIDKLETTIKNEAGTEFNVSSPKQVGEVLFDKLNLDPKA 591
Query: 1810 GHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT 1869
K Q+ ST++ L +R HPI+ I E+R L KLLN + ++ L ++ +
Sbjct: 592 KKTKSGQY-STNEEILQKIRDRHPIIGHILEYRGLKKLLNTYVEALPKL----INKETGR 646
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQ 1929
LH + Q TGRLS PNLQ + + + R F +P
Sbjct: 647 LHTSFNQAVVVTGRLSSSNPNLQNIP----------------IREEEGREMRRAFVVPD- 689
Query: 1930 ENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERD 1989
EN + L+ADYSQIELRLMAH S+D L+ + DV AAR D V R
Sbjct: 690 ENHLFLSADYSQIELRLMAHLSEDEHLLDAFNN-QKDVHAATAARIFNVDLDEVTPDMRR 748
Query: 1990 QTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYV 2049
+ K +GI+YG+ LSE+LN S +EAK I + +FPGV +++ A+ + GYV
Sbjct: 749 KAKTANFGIIYGISAFGLSERLNISRSEAKSIIDEYFENFPGVKEYMNKAIEQARKLGYV 808
Query: 2050 ESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPD 2109
E+L GR+R+L I N+ + A+R A+N+ QG+AADIIK AM + V +K
Sbjct: 809 ETLFGRRRYLPDINSRNSVVRGVAERNAINAPIQGTAADIIKKAM-----VAVDKAFK-- 861
Query: 2110 SSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQV 2169
+ N Q R++LQVHDEL EV ++ +V++ MESA L VPL+V I V
Sbjct: 862 ---SENLQ-----SRMVLQVHDELNFEVRKEELQRVTEIVKREMESAVSLKVPLIVDIGV 913
Query: 2170 GSTW 2173
G W
Sbjct: 914 GQNW 917
>gi|407681925|ref|YP_006797099.1| DNA polymerase I [Alteromonas macleodii str. 'English Channel 673']
gi|407243536|gb|AFT72722.1| DNA polymerase I [Alteromonas macleodii str. 'English Channel 673']
Length = 930
Score = 234 bits (598), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 242/461 (52%), Gaps = 42/461 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L + +W KL EL L+++E+PL VL+ ME G+ +D + LQ L ++
Sbjct: 506 TLRLHNAIWTKLKEIPELKNLLIDVEVPLACVLSRMEQEGVLIDSQRLLQQSQDLATRIA 565
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE + + AG F+L + + +VL+ + LPI + KG PST + L L E+P
Sbjct: 566 ELESEVHEEAGEPFNLGSTKQLQHVLFEKMSLPIIKKTPKGA--PSTSEDVLQELALEYP 623
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ I E+R L KL N + + I+ T + +H + Q TATGRLS +PNLQ
Sbjct: 624 LPKKIMEYRGLTKLKNTYTDKLPKM--INHRTGR--VHTSYHQAVTATGRLSSTDPNLQN 679
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ + NE+ R F+P + N +AADYSQIELR+MAH S D
Sbjct: 680 I------PIRNEE-----------GRRVRQAFVPREGNK-FVAADYSQIELRIMAHLSGD 721
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
L+ + HG D+ A+ G D V +++R K + +G++YGM LS+QLN
Sbjct: 722 KGLLDAFA--HGKDIHKATASEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLSKQLN 779
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
NEA++ + + +PGV ++ S +KGYVE++ GR+ +L IK N +
Sbjct: 780 IPRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKG 839
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK+AMI + I + ++S +++QVHDE
Sbjct: 840 AERAAINAPMQGTAADIIKMAMIKVDDWI-----RKNAS---------DDVTMMMQVHDE 885
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV E+ ++ VS + MESAA L VPL+V+ VG W
Sbjct: 886 LVFEIKEDKVETYVSTITALMESAATLNVPLVVEAGVGENW 926
>gi|266618521|pdb|3EYZ|A Chain A, Cocrystal Structure Of Bacillus Fragment Dna Polymerase I
With Duplex Dna (Open Form)
Length = 580
Score = 234 bits (598), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 230/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 178 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 237
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 238 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 294
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 295 LLKVVR--PDTKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 335
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 336 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 392
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + YGI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 393 IFQVSEDEVTPNMRRQAKAVNYGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 452
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 453 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 512
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 513 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 557
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 558 QAVTLRVPLKVDYHYGSTW 576
>gi|418464049|ref|ZP_13034991.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359757390|gb|EHK91544.1| DNA polymerase I [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 932
Score = 234 bits (598), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 167/551 (30%), Positives = 274/551 (49%), Gaps = 59/551 (10%)
Query: 1637 VGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
+G + + ++GID+ ++S+ L + + N++ K+ L +
Sbjct: 423 IGQNLKFDMTIFARNGIDLQGIEFDTMLLSYTL----DSTGRHNMDDLAKRYLGHQTIGF 478
Query: 1690 ANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPL 1742
+ +G+ KNQ+ A T L +LW+ L + + AL +IE+PL
Sbjct: 479 EDIAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQMLWQKLQPQPGLVALYQSIELPL 538
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
+ VL+ ME G+ +D + N + ++L LE +A+ LAG F+L + + +L+
Sbjct: 539 LGVLSRMERCGVLIDSDALFLQSNEIIERLTALEMQAHALAGQPFNLASTKQLQEILFDK 598
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
L LP+ + KG PST++ L+ L + H + V+ EHR L+KL + + +
Sbjct: 599 LGLPVLQKTPKGA--PSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQM---- 652
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
++ Q +H + Q TATGRLS +PNLQ + + NE+ R
Sbjct: 653 VNPQTGRVHTSYHQAVTATGRLSSSDPNLQNI------PIRNEE-----------GRRIR 695
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
FI +++ + ++AADYSQIELR+MAH S D LI ++ D+ AA G +
Sbjct: 696 QAFI-ARDGYKIIAADYSQIELRIMAHLSNDQGLINAFAQGK-DIHRSTAAEIFGLPLEQ 753
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V S++R K + +G++YGM LS QL S +A+ + + +P V +++H
Sbjct: 754 VTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRADAQRYMDLYFQRYPSVQTFIHDIREK 813
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+GYVE+L GR+ +L +I N + A+R A+N+ QG+AADIIK AMI + +
Sbjct: 814 AKAQGYVETLFGRRLYLPEINSSNAMRRKGAERVAINAPMQGTAADIIKRAMIKLDELTR 873
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
PD +++QVHDELV EV I L+++ ME+AA L+VP
Sbjct: 874 D---DPD-------------IHMIMQVHDELVFEVRSEKIAFFSGLIKQHMEAAAELVVP 917
Query: 2163 LLVKIQVGSTW 2173
L+V + VG W
Sbjct: 918 LIVDVGVGENW 928
>gi|390630660|ref|ZP_10258638.1| DNA-directed DNA polymerase [Weissella confusa LBAE C39-2]
gi|390484127|emb|CCF30986.1| DNA-directed DNA polymerase [Weissella confusa LBAE C39-2]
Length = 918
Score = 234 bits (597), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 241/466 (51%), Gaps = 44/466 (9%)
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
R+ + L + L K L E IE+PL VLADME GI VD L+ R+ L
Sbjct: 491 RKAMAIQYLKAPLTKKLADHEQTNLYEEIELPLTYVLADMEATGITVDANTLLEMRSKLT 550
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKL-PIPEGHNKGKQHPSTDKHCLDLL 1828
++L LE+ Y AG +F++ + + +L+ + PI K K ST L+ +
Sbjct: 551 ERLSELEQTIYQQAGHEFNIQSPKQLGVILFEEMGYTPI----KKTKTGYSTSVEVLEQM 606
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
+ P+V I E+R +AK+ + + + + S S +H +LQT T TGRLS E
Sbjct: 607 G-DVPLVASILEYRQIAKIQSTYVEGLLRVIHGSDSK----VHTRYLQTLTQTGRLSSVE 661
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + +E + +I R FIP Q++W++ +ADYSQIELR++A
Sbjct: 662 PNLQNIPVRIE---------------EGRRI--RKAFIPRQDDWMIFSADYSQIELRVLA 704
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRS-EDSVGSQERDQTKRLIYGILYGMGPNTL 2007
H + D L D+ A R G + E++V R Q K + +GI+YG+ L
Sbjct: 705 HITGDKHLQEAFINGE-DIHAATARRIFGLAPEETVDGNIRRQAKAVNFGIVYGISDFGL 763
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ + S +AK+ I ++ +PGV W ++S +KGYVE++ R+R+L IK N
Sbjct: 764 AKNIGVSRKQAKQIIDTYFEQYPGVKQWSEDIIASAREKGYVETIAHRRRYLPDIKAKNF 823
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+NS QGSAADIIKIAMIN+ I D+ L A ++LL
Sbjct: 824 NARSFAERTAMNSPIQGSAADIIKIAMINMQQAIT------DAGLQA---------KMLL 868
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+ E S I+ LV + M+SA L VPL V G +W
Sbjct: 869 QVHDELIFEAPASEIEALHELVPRIMDSAVKLDVPLSVASHEGKSW 914
>gi|294501500|ref|YP_003565200.1| DNA polymerase I [Bacillus megaterium QM B1551]
gi|294351437|gb|ADE71766.1| DNA polymerase I [Bacillus megaterium QM B1551]
Length = 875
Score = 234 bits (597), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 257/523 (49%), Gaps = 46/523 (8%)
Query: 1654 DMCIVSWILWP---DDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D+ I S+IL P +D+ ++ L K + S EA + A H R
Sbjct: 392 DVMIASYILNPAEANDDLATIAKL-KGYHQVQSDEAVYGKGAKRSIAEAAQLAEH--VIR 448
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
+ A L VL K LV E E +E+PL VLADME G+ +D + L++
Sbjct: 449 KAAAVAYLKEVLEKELVENEQFELFEKLEMPLAIVLADMEYQGVKIDRARLDEMGEDLRE 508
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
+L +E K Y AG +F++ + + VL+ ++LP+ + K K ST L+ L
Sbjct: 509 QLEKIEAKIYEYAGQEFNINSPKQLGVVLFEKMQLPVIK---KTKTGYSTSADVLEQLAS 565
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
H I+P I ++R L KL + + + + I S K +H + QT T TGRLS +PN
Sbjct: 566 THDIIPEILQYRQLGKLQSTYIEGLKKV--IHESDGK--VHTRFNQTLTQTGRLSSVDPN 621
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + +E + KI R F+PSQ +W++ AADYSQIELR++AH
Sbjct: 622 LQNIPIRLE---------------EGKKI--RGAFVPSQPDWLIFAADYSQIELRVLAHI 664
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
+ D LI K D+ T A + V S R Q K + +GI+YG+ LS+
Sbjct: 665 ADDEKLIDAF-KHDLDIHTKTAMDVFHVEREEVTSNMRRQAKAVNFGIVYGISDYGLSQS 723
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L + A I+ + SFPGV ++ V +KGYV +L R+R+L +I N +
Sbjct: 724 LGITRKAAATFIERYLKSFPGVQEYMDTIVRDAKEKGYVTTLLHRRRYLPEITSRNFNLR 783
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
S A+R A+N+ QG+AADIIK AMI + + D +L A +LLLQVH
Sbjct: 784 SFAERTAMNTPIQGTAADIIKKAMIEMDKRL------KDENLQA---------KLLLQVH 828
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DEL+ E IK +V + ME+A L VPL V G TW
Sbjct: 829 DELIFEAPEEEIKILEKIVPEVMENALELEVPLKVDYSYGKTW 871
>gi|33520055|ref|NP_878887.1| DNA polymerase I [Candidatus Blochmannia floridanus]
gi|33504401|emb|CAD83294.1| DNA polymerase I [Candidatus Blochmannia floridanus]
Length = 943
Score = 234 bits (597), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 246/458 (53%), Gaps = 43/458 (9%)
Query: 1718 LCSVLWKLLVSEELIEALLN-IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLE 1776
L +LW L S + ++ + IEIPL+++LA +E +G+ +D L L L+
Sbjct: 523 LHQILWPQLYSNDKLKKIFQEIEIPLISILAHIESYGVLIDKTLLCSYSMELNVHLNTLQ 582
Query: 1777 KKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVP 1836
+AY LAG F+L + + +LY KLPI + G PST++ L L H++PI
Sbjct: 583 NQAYQLAGTSFNLDSIKQLQEILYKKQKLPILKKTPSGS--PSTNEEVLKKLSHKYPIPK 640
Query: 1837 VIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEH 1896
+I ++R+L+KL + + S+ ++T+ +H + QT TATGRLS PNLQ +
Sbjct: 641 IILKYRSLSKLKSTYTNKLISM----VNTESNRIHTSYNQTRTATGRLSSANPNLQNIP- 695
Query: 1897 MVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPAL 1956
N D KI + F PS ++++ADYSQIELR+MAH S+D L
Sbjct: 696 --------------NRNHDGRKI-RQAFIAPSHS--VIVSADYSQIELRIMAHLSRDFKL 738
Query: 1957 IG-LLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
I LS D+ T A+ S + V +++R Q K + +G++YGM LS+QL+ +
Sbjct: 739 INDFLSG--KDIHTTTASEIFVTSLNLVTNEQRHQAKTINFGLIYGMSAFGLSKQLSVTC 796
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
EA++ + + +PGV ++ + ++ GYV +L+GRK +L I N +K A+R
Sbjct: 797 YEAQKYVDRYFQRYPGVMQYIQHIKDNVYKYGYVSTLEGRKLYLPNIYSKNLSKKKGAER 856
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
A+N+ QGSAADIIK AMI+I+ + K D ++++QVHDELV
Sbjct: 857 AAINAPMQGSAADIIKKAMISINYWL-----KQDDI----------PVQMIMQVHDELVF 901
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EV + I A+ ++K ME +L VPL V I VG W
Sbjct: 902 EVQNNFIDTAIKQIKKLMEECFILDVPLKVDIGVGKNW 939
>gi|417853762|ref|ZP_12499110.1| DNA polymerase I [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|338219066|gb|EGP04780.1| DNA polymerase I [Pasteurella multocida subsp. multocida str.
Anand1_goat]
Length = 930
Score = 234 bits (597), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 270/529 (51%), Gaps = 56/529 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D ++S++L + + N+++ K+ L + + +G+ K Q+ A
Sbjct: 445 DTMLLSYVL----DSTGRHNMDELAKRYLGHQTIHFEDIAGKGKAQLTFNQIPLEQAAEY 500
Query: 1708 CCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
T L VLW K+ EL++ +E+PL +VL+ +E G+ +D +
Sbjct: 501 AAEDADITMKLQQVLWEKVAAQPELVKLYQTMELPLASVLSRIERHGVLIDSDALFSQSQ 560
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+ +L LE++AY LAG +F+L + + +L+ L LP+ + KG PST++ L+
Sbjct: 561 QIGVRLTALEQQAYELAGQQFNLASTKQLQEILFDKLGLPVLKKTPKGA--PSTNEEVLE 618
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT--LHGHWLQTSTATGRL 1884
L +EH + ++ EHR L+KL + ++ + K T +H + Q TATGRL
Sbjct: 619 ELAYEHALPKILVEHRGLSKLKSTYTD------KLPLMVNKDTGRVHTSYHQAVTATGRL 672
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + + NE+ G R FI + E + ++AADYSQIEL
Sbjct: 673 SSSDPNLQNI------PIRNEE---GR--------RIRQAFI-APEGYQIMAADYSQIEL 714
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH S+D LI ++ D+ AA G V S++R K + +G++YGM
Sbjct: 715 RIMAHLSQDKGLINAFNEGK-DIHRSTAAEIFGIPLAQVSSEQRRSAKAINFGLIYGMSS 773
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QL +EA++ + + +PGV +++H + +GYV +L R+ +L I+
Sbjct: 774 FGLSRQLGIPRHEAQKYMDLYFQRYPGVQAFMHDIRETAKAQGYVTTLFDRRLYLPDIQS 833
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AAD+IK AMI + I G +PD +
Sbjct: 834 SNAIRRKAAERVAINAPMQGTAADLIKRAMITLDREIAG---QPD-------------IK 877
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV I+ ++++ ME AA L+VPL+V + VG W
Sbjct: 878 MIMQVHDELVFEVRTDKIEHFRTIIKTTMEQAAQLVVPLIVDVGVGKNW 926
>gi|347752916|ref|YP_004860481.1| DNA polymerase I [Bacillus coagulans 36D1]
gi|347585434|gb|AEP01701.1| DNA polymerase I [Bacillus coagulans 36D1]
Length = 875
Score = 234 bits (597), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 174/563 (30%), Positives = 267/563 (47%), Gaps = 67/563 (11%)
Query: 1613 KHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNP 1672
K + V+++R+G ++L GT D+ +VS++L P D
Sbjct: 374 KRSIVALRRYG-IDLRGTDF---------------------DLLLVSYLLNPSDTVEDFA 411
Query: 1673 NLEK--EVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEE 1730
++ K + + EA + + R A H R+ ALC K L +
Sbjct: 412 SVAKTHDYGNVETDEAVYGKGAKRKLPEEKRYAEH--ISRKAEAIDALCEPCTKALKNNG 469
Query: 1731 LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
+E +E+PL +LADME G+ VD + + + +L +E++ Y++AG +F++
Sbjct: 470 QLELFEQLELPLSLILADMEYTGVKVDTDRLKEMGEEFKLRLHEIEQRIYSMAGTEFNIN 529
Query: 1791 TAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNC 1850
+ + +L+ + LP+ + K K ST L+ L H IV I +R L KL +
Sbjct: 530 SPKQLGVILFEKMGLPVIK---KTKTGYSTSADVLEKLEPAHEIVREILHYRQLGKLQST 586
Query: 1851 TLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGG 1910
+ + + Q +H + Q T TGRLS +PNLQ + +E
Sbjct: 587 YIEGLLKVVH-----QDGKVHTRFNQALTQTGRLSSTDPNLQNIPIRME----------- 630
Query: 1911 NAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
+ KI R F+PS+E W++ ++DYSQ+ELR++AH S D LI + D+ T
Sbjct: 631 ----EGRKI--RQAFVPSEEGWLIFSSDYSQVELRVLAHISGDEKLIEAF-REGMDIHTK 683
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFP 2030
A + V S+ R Q K + +GI+YG+ LS+ L S EA E IK + +S+P
Sbjct: 684 TAMEVFHVKAEEVTSEMRRQAKTVNFGIVYGISDYGLSQNLGISRKEAGEFIKRYFASYP 743
Query: 2031 GVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADII 2090
V ++ V QKGYV +L R+R+L +I N +S A+R A+N+ QGSAADII
Sbjct: 744 RVKEYMDEIVREAKQKGYVSTLLKRRRYLPEITSRNFNLRSFAERTAMNTPIQGSAADII 803
Query: 2091 KIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQ 2150
K AMI+ +A + K R RLLLQVHDEL+ E I+ +V
Sbjct: 804 KKAMID---------------MAKRLKKEKLRARLLLQVHDELIFEAPEEEIEVLKEIVP 848
Query: 2151 KCMESAALLLVPLLVKIQVGSTW 2173
+ ME A L PL V G TW
Sbjct: 849 EVMEHAVDLAAPLKVDSAYGPTW 871
>gi|390136431|pdb|4DQI|A Chain A, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment,
Dna Duplex, And Dctp (Paired With Dg Of Template)
gi|390136432|pdb|4DQI|D Chain D, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment,
Dna Duplex, And Dctp (Paired With Dg Of Template)
gi|390136437|pdb|4DQP|A Chain A, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment,
Dna Duplex, And Ddctp (Paired With Dg Of Template)
gi|390136438|pdb|4DQP|D Chain D, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment,
Dna Duplex, And Ddctp (Paired With Dg Of Template)
gi|390136458|pdb|4DS4|A Chain A, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment,
Dna Duplex, And Rctp In Presence Of Mn2+
gi|390136459|pdb|4DS4|D Chain D, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment,
Dna Duplex, And Rctp In Presence Of Mn2+
gi|390136464|pdb|4DS5|A Chain A, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment,
Dna Duplex, And Rctp In Presence Of Mg2+
gi|390136465|pdb|4DS5|D Chain D, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment,
Dna Duplex, And Rctp In Presence Of Mg2+
Length = 592
Score = 234 bits (597), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 231/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 190 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 249
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 250 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 306
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R +T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 307 LLKVVR--PATKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 347
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 348 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 404
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + +GI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 405 IFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 464
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 465 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 524
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 525 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 569
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 570 QAVTLRVPLKVDYHYGSTW 588
>gi|108759777|ref|YP_631312.1| DNA polymerase I [Myxococcus xanthus DK 1622]
gi|108463657|gb|ABF88842.1| DNA polymerase I [Myxococcus xanthus DK 1622]
Length = 908
Score = 234 bits (597), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 187/612 (30%), Positives = 297/612 (48%), Gaps = 68/612 (11%)
Query: 1571 NVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGT 1630
V P+ Q + R ++G + + FT + +VL+ AAV + GG +L
Sbjct: 354 GVALPDGQTAYVPLRHAQLGVTQVRPEA--FTAAFR---EVLEDAAV---KKGGHDLKAL 405
Query: 1631 SLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA-- 1688
SL L N G + L H D+ ++S++L P + +L +E RL++E
Sbjct: 406 SLVLANDG---ITLHGAH----DDVELLSYLLNPSRREHALVDLSRE---RLNTELPPLP 455
Query: 1689 AANRSGRWKNQMRRAAHN------GCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPL 1742
A R K A H G R R L LWK L + +L ++E+PL
Sbjct: 456 PAAEGKRGKKDRALADHTVEEVATGFAIRAEAARRLAPELWKELEAAKLAALARDMELPL 515
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
+ +LA ME G+ +D + + + K+ Y AG +F++ + + VL+
Sbjct: 516 LPLLAQMERRGVLLDTAELSRTSVKVDAAVEAQVKEVYRHAGREFNIGSNPQLVEVLFTE 575
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
LKLPI +GK PS D+ L+ L EHP+ I E+R+L+KL + L ++ +L
Sbjct: 576 LKLPI---IKRGKTGPSADQEVLEKLSEEHPLPGAIIEYRSLSKLKSTYLDTLPTLV--- 629
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
+H + Q +TATGRLS +PNLQ + V + E R
Sbjct: 630 --AADGRIHTTYHQAATATGRLSSTDPNLQNIP--VRTDLGRE---------------IR 670
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
F+ + E L++ADYSQ+ELRL+AH + DP LI D+ T AA G +++
Sbjct: 671 RAFV-AAEGHQLVSADYSQVELRLLAHIANDPVLIEAFLHDE-DIHTRTAAEVFGVAKEQ 728
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V ++R K + +GI YG+ P+ L +L + + A++ I+ + + + G+ +L V
Sbjct: 729 VDREQRRVAKMVNFGIAYGLSPHGLGARLGIAQDVARDIIERYFTRYAGIRRYLEETVDR 788
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+ GYVE+L GR+R+++ + N A+R A+N QG+AAD+IK AM+ +
Sbjct: 789 ARKTGYVETLYGRRRYMADLNSKNRGVAQAAERAAINMPIQGTAADLIKKAMLAV----- 843
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
D +L A K R R+LLQVHDEL+ E + +++ +L K M S A L VP
Sbjct: 844 ------DEALTAQ----KLRTRMLLQVHDELLFEAPDAEVEQVKALAVKAMSSVADLKVP 893
Query: 2163 LLVKIQVGSTWG 2174
L V++ G +W
Sbjct: 894 LKVEVGAGRSWA 905
>gi|359404893|ref|ZP_09197700.1| DNA-directed DNA polymerase [Prevotella stercorea DSM 18206]
gi|357559871|gb|EHJ41298.1| DNA-directed DNA polymerase [Prevotella stercorea DSM 18206]
Length = 878
Score = 234 bits (596), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 241/462 (52%), Gaps = 39/462 (8%)
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
+A+T +VL L + + NIE+PLV VLA+ME+ G+ +D + + +L ++
Sbjct: 452 IAETLHQYNVLKPRLKETGVEDLFYNIEMPLVPVLAEMEMTGVRLDTDALAETSKVLTER 511
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
+ +E+ Y LAG +F++ + + VL+G +K+ K Q+ T + L LR +
Sbjct: 512 MHQIEQSIYGLAGHEFNIASPKQVGEVLFGEMKIVEKPKKTKTGQY-VTSEEVLQQLRSK 570
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
PIV I EHR L KLL + ++ L ++ + +H + Q TATGRLS PNL
Sbjct: 571 APIVDHILEHRGLKKLLGTYVDALPKL----INPRTGHIHTTFNQAVTATGRLSSSNPNL 626
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + + ED E+ C FIP + + +ADYSQIELR+MAH S
Sbjct: 627 QNI------PVRGED----GKEIRKC-------FIP-EPGQLFFSADYSQIELRVMAHLS 668
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D +I + + D+ AAR +SV +R + KR +GI+YG+ L+E+L
Sbjct: 669 GDENMIEAFREGY-DIHAATAARIYKEDINSVSRDQRTKAKRANFGIIYGITVFGLAERL 727
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ S +EAK+ I+ + ++FPGV +++ A + + GY E+ R+R+L I N ++
Sbjct: 728 DISRDEAKQLIEGYFNTFPGVHAYMEKAKETAREHGYAETFFHRRRYLPDITSHNATVRN 787
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QGSAADIIKIAM+ I+ FQ R +++LQVHD
Sbjct: 788 FAERNAINAPIQGSAADIIKIAMVRIYE---------------RFQREGIRSKMILQVHD 832
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL V P + +V + M++A L VPL+ G W
Sbjct: 833 ELNFSVLPEEKERVEKIVIEEMQNAYPLHVPLVADSGCGENW 874
>gi|406837658|ref|ZP_11097252.1| DNA polymerase I [Lactobacillus vini DSM 20605]
Length = 891
Score = 234 bits (596), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 270/550 (49%), Gaps = 57/550 (10%)
Query: 1630 TSLGLENVGSSFLLLSPVHLKD-GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA 1688
T +GL +G +HL+ D+ +VS++L D + L ++ L +
Sbjct: 389 TIIGLRRLG--------IHLQRVAFDLLLVSYLLDTSDNSNDLGKLAQQHDYYLVASDEE 440
Query: 1689 AANRSGRW---KNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNV 1745
+ ++ R H C +V L L L + + +E L IE PL V
Sbjct: 441 VYGKGTKYAIPSKDSRLFEH--LCHKVRAIAELQQPLLAKLEANQQLELYLKIERPLTFV 498
Query: 1746 LADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKL 1805
LA+ME+ GI VD + + L ++L LEK Y AG +F++ + + +L+ LKL
Sbjct: 499 LAEMEIAGIKVDPQKLKMISSKLIEQLSDLEKAIYNEAGEEFNINSPKQLGVILFEKLKL 558
Query: 1806 PIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMST 1865
P+ + K K ST L+ LR PIV I ++R LAKL + + + + IS
Sbjct: 559 PVIK---KTKTGYSTAVGVLEKLRGMAPIVDHILKYRQLAKLQSTYIDGLLKV--ISAKD 613
Query: 1866 QKYTLHGHWLQTSTATGRLSMEEPNLQCVE-HMVEFKMSNEDIYGGNAEVDHCKINARDF 1924
QK +H + QT TATGRLS +PNLQ + + E + R
Sbjct: 614 QK--IHTRYTQTLTATGRLSSVDPNLQNIPIRLAEGR------------------QIRQA 653
Query: 1925 FIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS-V 1983
F+PS W + ++DYSQIELR++AH S D + K D+ A + G ++D+ V
Sbjct: 654 FVPSHAGWKIFSSDYSQIELRVLAHISHDQNMQAAF-KAGADIHASTARQIFGLADDAKV 712
Query: 1984 GSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSC 2043
+ R Q K + +GI+YG+ LS+ + S +AK+ I+ + FPGV ++ V
Sbjct: 713 TANLRRQAKAVNFGIVYGISDYGLSQNVGISRQQAKKFIERYFEVFPGVHQYMQEIVKKA 772
Query: 2044 HQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVG 2103
H +GYVE+L R+R+L +IK N +S A+R A+N+ QGSAADIIK+AMI +
Sbjct: 773 HAQGYVETLFKRRRYLPEIKSKNYNLRSFAERTAMNTPIQGSAADIIKVAMIRMQ----- 827
Query: 2104 GVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPL 2163
+L AN + ++LLQVHDEL+ E I LV M+SA L VPL
Sbjct: 828 ------QALQAN----HLQAKMLLQVHDELIFEAPADEIPRLEELVPGIMDSAVDLEVPL 877
Query: 2164 LVKIQVGSTW 2173
V+ G TW
Sbjct: 878 KVESAYGDTW 887
>gi|428218098|ref|YP_007102563.1| DNA polymerase I [Pseudanabaena sp. PCC 7367]
gi|427989880|gb|AFY70135.1| DNA polymerase I [Pseudanabaena sp. PCC 7367]
Length = 972
Score = 234 bits (596), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 234/450 (52%), Gaps = 42/450 (9%)
Query: 1724 KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLA 1783
KL +L++ IE+PL VLA+ME GI +D + L+ L + K+Y
Sbjct: 561 KLEAEPDLLKLFQEIELPLEPVLAEMEWTGIRIDKDYLANFSQELETDLESIAAKSYAAV 620
Query: 1784 GMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRT 1843
G +F+L + ++ +L L + K K STD + L L+ E ++ ++ EHR+
Sbjct: 621 GREFNLNSPKQLSEILLERLGEKFTKKSRKSKTGYSTDINVLHKLQGEDELIDLMIEHRS 680
Query: 1844 LAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMS 1903
LAKL + + ++ +L + ++ +H + QT ATGRLS PNLQ + F
Sbjct: 681 LAKLKSTYVDALPAL----VDSRSDRVHTDYNQTVAATGRLSSSNPNLQNIPIRTAF--- 733
Query: 1904 NEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP 1963
+ I G F+P Q +W+L++ADYSQIELR++AH +++P L+ ++
Sbjct: 734 SRRIRAG--------------FLPEQ-DWLLVSADYSQIELRILAHLAQEPELVKAYNQ- 777
Query: 1964 HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIK 2023
DV T+ A + E + S+ER K + YG++YGMG + + S EA++ I
Sbjct: 778 GDDVHTLTAQLLLEKEE--ISSEERRLAKIINYGVIYGMGARKFNRETGVSVKEAQQFID 835
Query: 2024 SFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQ 2083
+F + + ++ A + KGYV ++ GR+R+ +K N K+ R AVN+ Q
Sbjct: 836 AFYQRYAKIFEYMQTAETEAEAKGYVTTVAGRRRYFRDLKRMNGYRKAALLRSAVNTPIQ 895
Query: 2084 GSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIK 2143
G++ADIIKIAM+++H + M RLLLQVHDELV EV + +
Sbjct: 896 GTSADIIKIAMVSLHEL-----------------MQAYEARLLLQVHDELVFEVPEAELD 938
Query: 2144 EAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E + L++ MESA L VPL+V + VG W
Sbjct: 939 ELLPLIKSTMESALPLSVPLVVDVHVGKNW 968
>gi|116332033|ref|YP_801751.1| DNA-directed DNA polymerase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116125722|gb|ABJ76993.1| DNA-directed DNA polymerase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 921
Score = 234 bits (596), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 280/557 (50%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G +L+ + D + S+++ P+ R N++ K L+
Sbjct: 412 GQNIKYDLIVLENHG---FILNNIQF----DTMLASYVIQPEGRRH---NMDVLAKDLLN 461
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ + +G+ K ++ A+ + L+++ + E +E +L N
Sbjct: 462 YDTITYDDLVGTGKKKKELTDIDPEQVAEYAAEDADITFRLYQIFRKKIKESGVEPILRN 521
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 522 IEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGRSFNIASTKELQK 581
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL + G STD L+ L EHPIV + ++R KL + + ++
Sbjct: 582 ILFDDLKLKTVKKTQTGY---STDHEVLEELLGEHPIVEKLLDYRKYTKLKSTYVDALPK 638
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D G
Sbjct: 639 M----VNPRTGRIHTSYNQTIAATGRLSSTDPNLQNI--------PIRDREG-------- 678
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
++ + F + S E + +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 679 RLLRKGFTVDSDE-YEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHIRTAAALY 735
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + +PGV S++
Sbjct: 736 GVPEKEVTPEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMIQYPGVKSYM 795
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R + I + K A+R A+NS QG++AD+IKIAMIN
Sbjct: 796 DSMVEFAEKNGYVQTLTGRRRPIVDINSTHKSAKEAAKRVAINSPVQGTSADMIKIAMIN 855
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I Y R R+LLQVHDELV EV +E ++K ME+A
Sbjct: 856 IHEDIEKKHY---------------RSRMLLQVHDELVFEVHKKEKEEFKISMKKHMENA 900
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P+LV+ + G W
Sbjct: 901 MPLDLPILVEGKFGVNW 917
>gi|421730686|ref|ZP_16169812.1| DNA polymerase I [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407074840|gb|EKE47827.1| DNA polymerase I [Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 879
Score = 234 bits (596), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 253/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++I+ P + ++ KE + S+ A + + + + R+
Sbjct: 395 FDALLAAYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADHLARKA 454
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
+ +L L L +E ++E+PL +L +ME G+ VD+E + L+ KL
Sbjct: 455 SAVNSLRDKLLDALEENNQLELYEDLELPLALILGEMESMGVKVDVERLKRMGEELKAKL 514
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ E+K + +AG F++ + + +L+ L LP K K ST L+ L +H
Sbjct: 515 KEYEEKIHDIAGEPFNINSPKQLGVILFEKLGLP---PVKKTKTGYSTSADVLEKLADKH 571
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I ++R + KL + + + + R + +H + Q T TGRLS +PNLQ
Sbjct: 572 DIVAYILQYRQIGKLQSTYIEGLLKVTR----KGSHKVHTRFNQALTQTGRLSSTDPNLQ 627
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ AADYSQIELR++AH SK
Sbjct: 628 NIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHISK 670
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A SED V R Q K + +GI+YG+ LS+ L
Sbjct: 671 DENLIEAFTNDM-DIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGISDYGLSQNLG 729
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + SFPGV +++ +V QKGYV +L R+R++ ++ N +S
Sbjct: 730 ITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSF 789
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +AA + K + RLLLQVHDE
Sbjct: 790 AERTAMNTPIQGSAADIIKKAMID---------------MAAELKEKKLKARLLLQVHDE 834
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ E I+ LV + ME A L VPL G +W
Sbjct: 835 LIFEAPKEEIEILEKLVPEVMEHALALDVPLKADYASGPSW 875
>gi|295706848|ref|YP_003599923.1| DNA polymerase I [Bacillus megaterium DSM 319]
gi|294804507|gb|ADF41573.1| DNA polymerase I [Bacillus megaterium DSM 319]
Length = 875
Score = 234 bits (596), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 261/525 (49%), Gaps = 50/525 (9%)
Query: 1654 DMCIVSWILWP---DDERSSNPNLEKEVKKRLSSEA--AAAANRSGRWKNQMRRAAHNGC 1708
D+ I S+IL P +D+ ++ L K + S EA A RS +Q+ A H
Sbjct: 392 DVMIASYILNPAEANDDLATIAKL-KGYHQVQSDEAVYGKGAKRSIAEADQL--AEH--V 446
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
R+ A L VL K LV E E +E+PL VLADME G+ +D + L
Sbjct: 447 IRKAAAVAYLKEVLEKELVENEQFELFEKLEMPLAIVLADMEYQGVKIDRARLDEMGEDL 506
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
+++L +E K Y AG +F++ + + VL+ ++LP+ + K K ST L+ L
Sbjct: 507 REQLEKIEAKIYEYAGQEFNINSPKQLGVVLFEKMQLPVIK---KTKTGYSTSADVLEQL 563
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
H I+P I ++R L KL + + + + I S K +H + QT T TGRLS +
Sbjct: 564 ASTHDIIPEILQYRQLGKLQSTYIEGLKKV--IHESDGK--VHTRFNQTLTQTGRLSSVD 619
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + +E + KI R F+PSQ W++ AADYSQIELR++A
Sbjct: 620 PNLQNIPIRLE---------------EGKKI--RGAFVPSQPGWLIFAADYSQIELRVLA 662
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H + D LI K D+ T A + V + R Q K + +GI+YG+ LS
Sbjct: 663 HIADDEKLIDAF-KHDLDIHTKTAMDVFHVEREEVTANMRRQAKAVNFGIVYGISDYGLS 721
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
+ L + A I+ + SFPGV ++ V +KGYV +L R+R+L +I N
Sbjct: 722 QSLGITRKAAATFIERYLKSFPGVQEYMDTIVRDAKEKGYVTTLLHRRRYLPEITSRNFN 781
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+S A+R A+N+ QG+AADIIK AMI + + D +L A +LLLQ
Sbjct: 782 LRSFAERTAMNTPIQGTAADIIKKAMIEMDKRL------KDENLQA---------KLLLQ 826
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VHDEL+ E IK +V + ME+A L VPL V G TW
Sbjct: 827 VHDELIFEAPEEEIKILEKIVPEVMENALELEVPLKVDYSYGKTW 871
>gi|407698276|ref|YP_006823063.1| DNA polymerase I [Alteromonas macleodii str. 'Black Sea 11']
gi|407247423|gb|AFT76608.1| DNA polymerase I [Alteromonas macleodii str. 'Black Sea 11']
Length = 929
Score = 234 bits (596), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 241/461 (52%), Gaps = 42/461 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L + +W KL EL L+++E+PL VL+ ME G+ +D + Q L ++
Sbjct: 505 TLRLHNAIWTKLKDIPELKNLLIDVEVPLACVLSRMEQEGVLIDSQKLRQQSQDLATRIA 564
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LEK+ + AG F+L + + +L+ + LPI + KG PST + L L E+P
Sbjct: 565 ELEKEVHEEAGEPFNLGSTKQLQQILFEKMSLPIIKKTPKGA--PSTSEDVLQELALEYP 622
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ I E+R L KL N + + I+ T + +H + Q TATGRLS +PNLQ
Sbjct: 623 LPKKIMEYRGLTKLKNTYTDKLPKM--INHRTGR--VHTSYHQAVTATGRLSSTDPNLQN 678
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ + NE+ R FIP + N +AADYSQIELR+MAH S D
Sbjct: 679 I------PIRNEE-----------GRRVRQAFIPREGNK-FVAADYSQIELRIMAHLSGD 720
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
L+ + HG D+ A+ G D V +++R K + +G++YGM LS+QLN
Sbjct: 721 KGLLDAFA--HGKDIHKATASEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLSKQLN 778
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
NEA++ + + +PGV ++ S +KGYVE++ GR+ +L IK N +
Sbjct: 779 IPRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKG 838
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK+AMI + I + ++S +++QVHDE
Sbjct: 839 AERAAINAPMQGTAADIIKMAMIKVDDWI-----RKNAS---------DDVTMMMQVHDE 884
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV E+ ++ VS + MESAA L VPL+V+ VG W
Sbjct: 885 LVFEIKEDKVETYVSTITALMESAATLNVPLVVEAGVGDNW 925
>gi|271502639|ref|YP_003335665.1| DNA polymerase I [Dickeya dadantii Ech586]
gi|270346194|gb|ACZ78959.1| DNA polymerase I [Dickeya dadantii Ech586]
Length = 929
Score = 234 bits (596), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 236/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L LW KL +EL + NI++PLV VL+ ME G+ +D + L ++L
Sbjct: 506 TLRLHETLWAKLEPQQELCQVFKNIDMPLVPVLSRMERTGVLIDTTILAEHSQELTQRLA 565
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE +A+ LAG F+L + + +LY L+LP+ + KG PST++ L L +HP
Sbjct: 566 ELEVRAHELAGEAFNLASPKQLGAILYEKLQLPVIKKTPKGA--PSTNEEVLAELALDHP 623
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ +I EHR LAKL + + + I+ T++ +H + Q TATGRLS +PNLQ
Sbjct: 624 LPKLILEHRELAKLKSTYTDKLPQM--INPLTKR--VHTSYHQAVTATGRLSSSDPNLQN 679
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ + NE+ R FI Q + +LAADYSQIELR+MAH S+D
Sbjct: 680 I------PVRNEE-----------GRRIRQAFIAPQ-GYQILAADYSQIELRIMAHLSRD 721
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
L+ S D+ AA G D V +++R K + +G++YGM LS QL
Sbjct: 722 AGLLKAFSDGL-DIHRATAAEVFGLPLDKVTTEQRRSAKAINFGLIYGMSAFGLSRQLGI 780
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
+ NEA++ + + +PGV ++ +GYV +L GR+ +L I N + A
Sbjct: 781 ARNEAQKYMNLYFERYPGVQEYMERTRQQAADQGYVSTLDGRRLYLPDIHSRNAMSRKAA 840
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AMI I + Q K +L+QVHDEL
Sbjct: 841 ERAAINAPMQGTAADIIKKAMIAIDDWL---------------QQEKPLATMLMQVHDEL 885
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V EV SV+ E + ++ ME L VPL V I GS W
Sbjct: 886 VFEVHHSVLDEVSAKIRNLMEGCMQLDVPLQVDIGTGSNW 925
>gi|149370950|ref|ZP_01890545.1| DNA polymerase I [unidentified eubacterium SCB49]
gi|149355736|gb|EDM44294.1| DNA polymerase I [unidentified eubacterium SCB49]
Length = 949
Score = 234 bits (596), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 237/451 (52%), Gaps = 43/451 (9%)
Query: 1728 SEELIEA-----LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTL 1782
S+EL EA +IE+PL+ VLA ME GI +D + L+ + LEK Y
Sbjct: 533 SKELGEANTQKLFTDIEVPLLRVLAAMEAEGINLDKTFLNSLSDDLESDIASLEKNIYAE 592
Query: 1783 AGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHR 1842
AG +F++ + + +L+G +KL K Q ST + L L +H I+ + E+R
Sbjct: 593 AGEEFNIASPKQLGEILFGKMKLVEKPKKTKTGQF-STAEDVLSALAKDHKIIADVLEYR 651
Query: 1843 TLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM 1902
LAKL + + ++ ++ +TQ+ +H ++QT ATGRLS PNLQ + E
Sbjct: 652 GLAKLKSTYVDALP--LQVEPATQR--VHTDYMQTVAATGRLSSNNPNLQNIPIRTERGR 707
Query: 1903 SNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSK 1962
R F+P EN++LLAADYSQIELR++A S++ ++ K
Sbjct: 708 Q-----------------VRKAFVPRDENYVLLAADYSQIELRIIAALSQEETMMEAF-K 749
Query: 1963 PHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKI 2022
D+ A++ + V ++R K + +GI+YG+ LS Q + S EAKE I
Sbjct: 750 NGEDIHASTASKVFDVPLEEVTREQRSNAKTVNFGIIYGVSAFGLSNQTSLSRGEAKELI 809
Query: 2023 KSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSIC 2082
++ ++P + ++ V+ GYVE++ GR+R+L+ I N + A+R AVN+
Sbjct: 810 DAYYETYPKLKHYMSEQVNFARDNGYVETIMGRRRYLNAINGSNAIVRGAAERNAVNAPI 869
Query: 2083 QGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVI 2142
QGSAADIIKIAMINI+ + G YK ++LLQVHDELV +V +
Sbjct: 870 QGSAADIIKIAMINIYRKLEEGNYK---------------TKMLLQVHDELVFDVHKDEL 914
Query: 2143 KEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E ++++ ME+A L+ VPL V++ +G W
Sbjct: 915 DEMKTMIKHEMENAYLMDVPLDVEVGIGQNW 945
>gi|421093666|ref|ZP_15554390.1| DNA-directed DNA polymerase [Leptospira borgpetersenii str.
200801926]
gi|410363649|gb|EKP14678.1| DNA-directed DNA polymerase [Leptospira borgpetersenii str.
200801926]
Length = 921
Score = 234 bits (596), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 280/557 (50%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G +L+ + D + S+++ P+ R N++ K L+
Sbjct: 412 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVIQPEGRRH---NMDVLAKDLLN 461
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ + +G+ K ++ A+ + L+++ + E +E +L N
Sbjct: 462 YDTITYDDLVGTGKKKKELTDIDPEQVAEYAAEDADITFRLYQIFRKKIKESGVEPILRN 521
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 522 IEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGRSFNIASTKELQK 581
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL + G STD L+ L EHPIV + ++R KL + + ++
Sbjct: 582 ILFDDLKLKTVKKTQTGY---STDHEVLEELLGEHPIVEKLLDYRKYTKLKSTYVDALPK 638
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D G
Sbjct: 639 M----VNPRTGRIHTSYNQTIAATGRLSSTDPNLQNI--------PIRDREG-------- 678
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
++ + F + S E + +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 679 RLLRKGFTVDSDE-YEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHIRTAAALY 735
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + +PGV S++
Sbjct: 736 GVPEKEVTPEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMIQYPGVKSYM 795
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R + I + K A+R A+NS QG++AD+IKIAMIN
Sbjct: 796 DSMVEFAEKNGYVQTLTGRRRPIVDINSTHKSAKEAAKRVAINSPVQGTSADMIKIAMIN 855
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I Y R R+LLQVHDELV EV +E ++K ME+A
Sbjct: 856 IHEDIEKKHY---------------RSRMLLQVHDELVFEVHKKEKEEFKISMKKHMENA 900
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P+LV+ + G W
Sbjct: 901 MPLDLPILVEGKFGVNW 917
>gi|418719645|ref|ZP_13278844.1| DNA-directed DNA polymerase [Leptospira borgpetersenii str. UI 09149]
gi|410743688|gb|EKQ92430.1| DNA-directed DNA polymerase [Leptospira borgpetersenii str. UI 09149]
Length = 921
Score = 234 bits (596), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 280/557 (50%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G +L+ + D + S+++ P+ R N++ K L+
Sbjct: 412 GQNIKYDLIVLENHG---FILNNIQF----DTMLASYVIQPEGRRH---NMDVLAKDLLN 461
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ + +G+ K ++ A+ + L+++ + E +E +L N
Sbjct: 462 YDTITYDDLVGTGKKKKELTDIDPEQVAEYAAEDADITFRLYQIFRKKIKESGVEPILRN 521
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 522 IEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGRSFNIASTKELQK 581
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL + G STD L+ L EHPIV + ++R KL + + ++
Sbjct: 582 ILFDDLKLKTVKKTQTGY---STDHEVLEELLGEHPIVEKLLDYRKYTKLKSTYVDALPK 638
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D G
Sbjct: 639 M----VNPRTGRIHTSYNQTIAATGRLSSTDPNLQNI--------PIRDREG-------- 678
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
++ + F + S E + +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 679 RLLRKGFTVDSDE-YEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHIRTAAALY 735
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + +PGV S++
Sbjct: 736 GVPEKEVTPEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMIQYPGVKSYM 795
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R + I + K A+R A+NS QG++AD+IKIAMIN
Sbjct: 796 DSMVEFAEKNGYVQTLTGRRRPIIDINSTHKSAKEAAKRVAINSPVQGTSADMIKIAMIN 855
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I Y R R+LLQVHDELV EV +E ++K ME+A
Sbjct: 856 IHEDIEKKHY---------------RSRMLLQVHDELVFEVHKKEKEEFKISMKKHMENA 900
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P+LV+ + G W
Sbjct: 901 MPLDLPILVEGKFGVNW 917
>gi|418737669|ref|ZP_13294066.1| DNA-directed DNA polymerase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410746863|gb|EKQ99769.1| DNA-directed DNA polymerase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 921
Score = 234 bits (596), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 280/557 (50%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G +L+ + D + S+++ P+ R N++ K L+
Sbjct: 412 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVIQPEGRRH---NMDVLAKDLLN 461
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ + +G+ K ++ A+ + L+++ + E +E +L N
Sbjct: 462 YDTITYDDLVGTGKKKKELTDIDPEQVAEYAAEDADITFRLYQIFRKKIKESGVEPILRN 521
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 522 IEMPLISVLAKMEKTGIALDIPYFEELARDFDREIRHLESEIHRQAGRSFNIASTKELQK 581
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL + G STD L+ L EHPIV + ++R KL + + ++
Sbjct: 582 ILFDDLKLKTVKKTQTGY---STDHEVLEELLGEHPIVEKLLDYRKYTKLKSTYVDALPK 638
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D G
Sbjct: 639 M----VNPRTGRIHTSYNQTIAATGRLSSTDPNLQNI--------PIRDREG-------- 678
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
++ + F + S E + +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 679 RLLRKGFTVDSDE-YEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHIRTAAALY 735
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + +PGV S++
Sbjct: 736 GVPEKEVTPEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMIQYPGVKSYM 795
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R + I + K A+R A+NS QG++AD+IKIAMIN
Sbjct: 796 DSMVEFAEKNGYVQTLTGRRRPIVDINSTHKSAKEAAKRVAINSPVQGTSADMIKIAMIN 855
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I Y R R+LLQVHDELV EV +E ++K ME+A
Sbjct: 856 IHEDIEKKHY---------------RSRMLLQVHDELVFEVHKKEKEEFKISMKKHMENA 900
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P+LV+ + G W
Sbjct: 901 MPLDLPILVEGKFGVNW 917
>gi|386833763|ref|YP_006239077.1| DNA polymerase I [Pasteurella multocida subsp. multocida str. 3480]
gi|385200463|gb|AFI45318.1| DNA polymerase I [Pasteurella multocida subsp. multocida str. 3480]
Length = 930
Score = 234 bits (596), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 163/529 (30%), Positives = 269/529 (50%), Gaps = 56/529 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D ++S++L + + N+++ K+ L + + +G+ K Q+ +
Sbjct: 445 DTMLLSYVL----DSTGRHNMDELAKRYLGHQTIHFEDIAGKGKAQLTFNQIPLEQSAEY 500
Query: 1708 CCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
T L VLW K+ EL++ +E+PL +VL+ +E G+ +D +
Sbjct: 501 AAEDADITMKLQQVLWEKVAAQPELVKLYQTMELPLASVLSRIERHGVLIDSDALFSQSQ 560
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+ +L LE++AY LAG +F+L + + +L+ L LP+ + KG PST++ L+
Sbjct: 561 QIGVRLTALEQQAYELAGQQFNLASTKQLQEILFDKLSLPVLKKTPKGA--PSTNEEVLE 618
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT--LHGHWLQTSTATGRL 1884
L +EH + ++ EHR L+KL + ++ + K T +H + Q TATGRL
Sbjct: 619 ELAYEHALPKILVEHRGLSKLKSTYTD------KLPLMVNKDTGRVHTSYHQAVTATGRL 672
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + + NE+ G R FI + E + ++AADYSQIEL
Sbjct: 673 SSSDPNLQNI------PIRNEE---GR--------RIRQAFI-APEGYQIMAADYSQIEL 714
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH S+D LI ++ D+ AA G V S++R K + +G++YGM
Sbjct: 715 RIMAHLSQDKGLINAFNEGK-DIHRSTAAEIFGIPLAQVSSEQRRSAKAINFGLIYGMSS 773
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QL +EA++ + + +PGV +++H + +GYV +L R+ +L I+
Sbjct: 774 FGLSRQLGIPRHEAQKYMDLYFQRYPGVQAFMHDIRETAKAQGYVTTLFDRRLYLPDIQS 833
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK AMI + I +PD +
Sbjct: 834 SNAIRRKAAERVAINAPMQGTAADIIKRAMITLDREIAE---QPD-------------IK 877
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV I+ ++++ ME AA L+VPL+V + VG W
Sbjct: 878 MIMQVHDELVFEVHSDKIEHFRTIIKTTMEQAAQLVVPLIVDVGVGKNW 926
>gi|188995635|ref|YP_001929887.1| DNA polymerase I [Porphyromonas gingivalis ATCC 33277]
gi|188595315|dbj|BAG34290.1| DNA polymerase I [Porphyromonas gingivalis ATCC 33277]
Length = 926
Score = 234 bits (596), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 196/686 (28%), Positives = 307/686 (44%), Gaps = 119/686 (17%)
Query: 1499 DCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRR 1558
DC + + +T F FD D + ++ + +C E+ +++ LP+D RR
Sbjct: 345 DC-IRMFSSTPCFSFDTETDSKDALRANIV----AITLCAESGRAFFIPLPEDEEIGKRR 399
Query: 1559 KDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVS 1618
D +L P + + K NMK IQVL
Sbjct: 400 LD-----------LLRP----------------LFADTAIGKVGQNMKYDIQVL------ 426
Query: 1619 IQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEV 1678
+ G+E G F D I ++L+PD N+++
Sbjct: 427 -----------SRYGIEVRGQLF------------DTMIAHYLLFPDLRH----NMDEMA 459
Query: 1679 KKRLSSEAAAAANRSGRWKNQ--MRRAAHNGCCRRVAQTRALCSVLWKL------LVSEE 1730
+ L ++ G K + +R+ + + W+L ++SE
Sbjct: 460 ETLLGYRTIHYSDLVGSDKQEVHIRQVPLQNLADYAMED---ADITWQLYERLNAMLSEA 516
Query: 1731 LIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSL 1789
+ +L +IE+PLV VL DME G+ +D E + + L ++++ +E + Y LAG F++
Sbjct: 517 GMTSLFESIEMPLVPVLVDMERSGVKLDTEVLRRTASRLGEEMQRIEDEIYRLAGHSFNI 576
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
+ + + VL+ L++ K + ST++ L L+ +HPIV +I ++R + KLL+
Sbjct: 577 NSPSQVGTVLFEELQITEKPKKTKSGSY-STNEEILVKLQEKHPIVRLILDYRGIKKLLS 635
Query: 1850 CTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG 1909
+ ++ M LH + QT TGRLS PNLQ + E
Sbjct: 636 TYVEALPE-----MRYPDGKLHTSFNQTVATTGRLSSSNPNLQNIPIRTEVGR------- 683
Query: 1910 GNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVF 1968
R F+P + I ++ADYSQIELRLMAH S+D +LI HG D+
Sbjct: 684 ----------GLRAAFVPDNDECIFMSADYSQIELRLMAHLSEDESLIQAFL--HGEDIH 731
Query: 1969 TMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSS 2028
A++ V R + K +GI+YG+ LSE+LN S EAK I+ + +S
Sbjct: 732 RATASKIYRLPLVEVTDDMRRRAKTANFGIIYGISAFGLSERLNISRTEAKALIEGYFAS 791
Query: 2029 FPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAAD 2088
+PGV +++ +++ ++GYV +L GRKRFL I N + A+R A+N+ QGSAAD
Sbjct: 792 YPGVKAYMDRSIAEAKRQGYVTTLFGRKRFLRDINSANAVVRGYAERNAINAPIQGSAAD 851
Query: 2089 IIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSL 2148
+IK+AMI IH I K R R++LQVHDEL V E L
Sbjct: 852 LIKLAMIRIHEEITER---------------KLRSRMILQVHDELNFNVLRPEAAEVREL 896
Query: 2149 VQKCMESAAL-LLVPLLVKIQVGSTW 2173
V+ CME L VPL+ +I G+ W
Sbjct: 897 VRSCMEGVMPSLRVPLIAEIGEGANW 922
>gi|383309782|ref|YP_005362592.1| DNA polymerase I [Pasteurella multocida subsp. multocida str. HN06]
gi|380871054|gb|AFF23421.1| DNA polymerase I [Pasteurella multocida subsp. multocida str. HN06]
Length = 930
Score = 234 bits (596), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 163/529 (30%), Positives = 269/529 (50%), Gaps = 56/529 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D ++S++L + + N+++ K+ L + + +G+ K Q+ +
Sbjct: 445 DTMLLSYVL----DSTGRHNMDELAKRYLGHQTIHFEDIAGKGKAQLTFNQIPLEQSAEY 500
Query: 1708 CCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
T L VLW K+ EL++ +E+PL +VL+ +E G+ +D +
Sbjct: 501 AAEDADITMKLQQVLWEKVAAQPELVKLYQTMELPLASVLSRIERHGVLIDSDALFSQSQ 560
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+ +L LE++AY LAG +F+L + + +L+ L LP+ + KG PST++ L+
Sbjct: 561 QIGVRLTALEQQAYELAGQQFNLASTKQLQEILFDKLSLPVLKKTPKGA--PSTNEEVLE 618
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT--LHGHWLQTSTATGRL 1884
L +EH + ++ EHR L+KL + ++ + K T +H + Q TATGRL
Sbjct: 619 ELAYEHALPKILVEHRGLSKLKSTYTD------KLPLMVNKDTGRVHTSYHQAVTATGRL 672
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + + NE+ G R FI + E + ++AADYSQIEL
Sbjct: 673 SSSDPNLQNI------PIRNEE---GR--------RIRQAFI-APEGYQIMAADYSQIEL 714
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH S+D LI ++ D+ AA G V S++R K + +G++YGM
Sbjct: 715 RIMAHLSQDKGLINAFNEGK-DIHRSTAAEIFGIPLAQVSSEQRRSAKAINFGLIYGMSS 773
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QL +EA++ + + +PGV +++H + +GYV +L R+ +L I+
Sbjct: 774 FGLSRQLGIPRHEAQKYMDLYFQRYPGVQAFMHDIRETAKAQGYVTTLFDRRLYLPDIQS 833
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK AMI + I +PD +
Sbjct: 834 SNAIRRKAAERVAINAPMQGTAADIIKRAMITLDREIAE---QPD-------------IK 877
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV I+ ++++ ME AA L+VPL+V + VG W
Sbjct: 878 MIMQVHDELVFEVHSDKIEHFRTIIKTTMEQAAQLVVPLIVDVGVGKNW 926
>gi|378773780|ref|YP_005176023.1| DNA polymerase I [Pasteurella multocida 36950]
gi|356596328|gb|AET15054.1| DNA polymerase I [Pasteurella multocida 36950]
Length = 930
Score = 234 bits (596), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 272/529 (51%), Gaps = 56/529 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D ++S++L + + N+++ K+ L + + +G+ K Q+ A
Sbjct: 445 DTMLLSYVL----DSTGRHNMDELAKRYLGHQTIHFEDIAGKGKAQLTFNQIPLEQAAEY 500
Query: 1708 CCRRVAQTRALCSVLWKLLVSE-ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
T L VLW+ +V++ EL++ +E+PL +VL+ +E G+ +D +
Sbjct: 501 AAEDADITMKLQQVLWEKVVAQPELVKLYQTMELPLASVLSRIERHGVLIDSDALFSQSQ 560
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+ +L LE++AY LAG +F+L + + +L+ L LP+ + KG PST++ L+
Sbjct: 561 QIGVRLTALEQQAYELAGQQFNLASTKQLQEILFDKLSLPVLKKTPKGA--PSTNEEVLE 618
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT--LHGHWLQTSTATGRL 1884
L +EH + ++ EHR L+KL + ++ + K T +H + Q TATGRL
Sbjct: 619 ELAYEHALPKILVEHRGLSKLKSTYTD------KLPLMVNKDTGRVHTSYHQAVTATGRL 672
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + + NE+ G R FI + E + ++AADYSQIEL
Sbjct: 673 SSSDPNLQNI------PIRNEE---GR--------RIRQAFI-APEGYQIMAADYSQIEL 714
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH S+D LI ++ D+ AA G V S++R K + +G++YGM
Sbjct: 715 RIMAHLSQDKGLINAFNEGK-DIHRSTAAEIFGIPLAQVSSEQRRSAKAINFGLIYGMSS 773
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QL +EA++ + + +PGV +++H + +GYV +L R+ +L I+
Sbjct: 774 FGLSRQLGIPRHEAQKYMDLYFQRYPGVQAFMHDIRETAKAQGYVTTLFDRRLYLPDIQS 833
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK AMI + I +PD +
Sbjct: 834 SNAIRRKAAERVAINAPMQGTAADIIKRAMITLDREIAE---QPD-------------IK 877
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV I+ ++++ ME AA L+VPL+V + VG W
Sbjct: 878 MIMQVHDELVFEVRSDKIEHFRTIIKTTMEQAAQLVVPLIVDVGVGKNW 926
>gi|269103720|ref|ZP_06156417.1| DNA polymerase I [Photobacterium damselae subsp. damselae CIP 102761]
gi|268163618|gb|EEZ42114.1| DNA polymerase I [Photobacterium damselae subsp. damselae CIP 102761]
Length = 923
Score = 233 bits (595), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 158/452 (34%), Positives = 244/452 (53%), Gaps = 43/452 (9%)
Query: 1724 KLLVSEELIEALLNIEIPLVNVLADMELWGIGVD-MEGCLQARNLLQKKLRYLEKKAYTL 1782
K+ E+L+ +IE+PLV VL+ ME G+ +D M+ Q++ + Q+ L LEK+A+ +
Sbjct: 509 KVSADEKLLHVFSDIEMPLVPVLSRMERTGVLIDSMKLSAQSQEIAQR-LDELEKRAFEI 567
Query: 1783 AGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHR 1842
A +F+L + + +L+ + LP+ + G PST++ L L ++P+ +I E+R
Sbjct: 568 ADQEFNLSSPKQLQAILFEKMGLPVLKKTPSGT--PSTNEEVLQELALDYPLPKLILEYR 625
Query: 1843 TLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM 1902
LAKL + + + ++ +T + +H + Q TATGRLS +PNLQ + +
Sbjct: 626 GLAKLKSTYTDKLPKM--VNPATGR--VHTSYHQAVTATGRLSSSDPNLQNI------PV 675
Query: 1903 SNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSK 1962
N++ G R FI Q + +LA DYSQIELR+MAH S D AL+
Sbjct: 676 RNDE---GR--------RIRQAFIAPQ-GYKVLAIDYSQIELRIMAHLSGDKALLDAFC- 722
Query: 1963 PHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEK 2021
HG D+ AA G D V S++R + K + +G++YGM L++QL+ EA+E
Sbjct: 723 -HGKDIHAATAAEILGLPLDQVSSEQRRRAKAINFGLIYGMSAFGLAKQLDMGRGEAQEY 781
Query: 2022 IKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSI 2081
+ ++ +PGV ++ + ++GYVE+L GR+ +L IK N + A+R A+N+
Sbjct: 782 MNTYFERYPGVLEYMETTRTVASEQGYVETLFGRRLYLPDIKSRNGLRRKAAERAAINAP 841
Query: 2082 CQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSV 2141
QG+AADIIK AM+ + I Q GR RLL+QVHDELV EV S
Sbjct: 842 MQGTAADIIKRAMVLVDEWI--------------GQQESGRVRLLMQVHDELVFEVQESE 887
Query: 2142 IKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
I+ ++ MESAA L VPL+ I G W
Sbjct: 888 IESVAQEIKTLMESAAQLDVPLIADIGYGENW 919
>gi|260767538|ref|ZP_05876474.1| DNA polymerase I [Vibrio furnissii CIP 102972]
gi|260617438|gb|EEX42621.1| DNA polymerase I [Vibrio furnissii CIP 102972]
Length = 932
Score = 233 bits (595), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 244/446 (54%), Gaps = 41/446 (9%)
Query: 1729 EELIEALLNIEIPLVNVLADMELWGIGV-DMEGCLQARNLLQKKLRYLEKKAYTLAGMKF 1787
++L+ +IE+PLV VL+ +E G+ + DM Q++ + Q+ L LEKKA+ +AG +F
Sbjct: 523 DKLLSVYRDIEMPLVPVLSRIERTGVLINDMLLGAQSQEIAQR-LDELEKKAFDIAGQEF 581
Query: 1788 SLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKL 1847
+L + + + + +KLP+ + G PST++ L L ++P+ VI E+R LAKL
Sbjct: 582 NLSSPKQLQTIFFDQMKLPVIKKTPSGT--PSTNEEVLQELALDYPLPAVILEYRGLAKL 639
Query: 1848 LNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDI 1907
+ + + I+ +T + +H + Q TATGRLS +PNLQ + + NE+
Sbjct: 640 KSTYTDKLPKM--INPTTGR--VHTSYHQAVTATGRLSSTDPNLQNI------PIRNEE- 688
Query: 1908 YGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDV 1967
R F+ + W ++A DYSQIELR+MAH S D AL+ + D+
Sbjct: 689 ----------GRRIRQAFV-APHGWKIMAVDYSQIELRIMAHLSGDKALLEAFQQGK-DI 736
Query: 1968 FTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKS 2027
AA G S D V S++R + K + +G++YGM L++QL EA+ + ++
Sbjct: 737 HAATAAEILGISIDQVTSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRGEAQAYMDTYFE 796
Query: 2028 SFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAA 2087
+PGV ++ S+ ++GYVE+L GR+ L +I N + A+R A+N+ QG+AA
Sbjct: 797 RYPGVMQYMEDTRSTAAEQGYVETLFGRRLHLPEITSRNGMRRKAAERAAINAPMQGTAA 856
Query: 2088 DIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVS 2147
DIIK AM+ + D+ + A GR +LL+QVHDELV EV+ S + E S
Sbjct: 857 DIIKKAMLLV-----------DAWIEAEG---AGRVKLLMQVHDELVFEVEESALSEIES 902
Query: 2148 LVQKCMESAALLLVPLLVKIQVGSTW 2173
VQK MESAA L VPL+ + G W
Sbjct: 903 KVQKLMESAAALKVPLVAEAGHGDNW 928
>gi|375129559|ref|YP_004991656.1| DNA polymerase I [Vibrio furnissii NCTC 11218]
gi|315178730|gb|ADT85644.1| DNA polymerase I [Vibrio furnissii NCTC 11218]
Length = 932
Score = 233 bits (595), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 244/446 (54%), Gaps = 41/446 (9%)
Query: 1729 EELIEALLNIEIPLVNVLADMELWGIGV-DMEGCLQARNLLQKKLRYLEKKAYTLAGMKF 1787
++L+ +IE+PLV VL+ +E G+ + DM Q++ + Q+ L LEKKA+ +AG +F
Sbjct: 523 DKLLSVYRDIEMPLVPVLSRIERTGVLINDMLLGAQSQEIAQR-LDELEKKAFDIAGQEF 581
Query: 1788 SLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKL 1847
+L + + + + +KLP+ + G PST++ L L ++P+ VI E+R LAKL
Sbjct: 582 NLSSPKQLQTIFFDQMKLPVIKKTPSGT--PSTNEEVLQELALDYPLPAVILEYRGLAKL 639
Query: 1848 LNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDI 1907
+ + + I+ +T + +H + Q TATGRLS +PNLQ + + NE+
Sbjct: 640 KSTYTDKLPKM--INPTTGR--VHTSYHQAVTATGRLSSTDPNLQNI------PIRNEE- 688
Query: 1908 YGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDV 1967
R F+ + W ++A DYSQIELR+MAH S D AL+ + D+
Sbjct: 689 ----------GRRIRQAFV-APHGWKIMAVDYSQIELRIMAHLSGDKALLEAFQQGK-DI 736
Query: 1968 FTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKS 2027
AA G S D V S++R + K + +G++YGM L++QL EA+ + ++
Sbjct: 737 HAATAAEILGISIDQVTSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRGEAQAYMDTYFE 796
Query: 2028 SFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAA 2087
+PGV ++ S+ ++GYVE+L GR+ L +I N + A+R A+N+ QG+AA
Sbjct: 797 RYPGVMQYMEDTRSTAAEQGYVETLFGRRLHLPEITSRNGMRRKAAERAAINAPMQGTAA 856
Query: 2088 DIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVS 2147
DIIK AM+ + D+ + A GR +LL+QVHDELV EV+ S + E S
Sbjct: 857 DIIKKAMLLV-----------DAWIEAEG---AGRVKLLMQVHDELVFEVEESALSEIES 902
Query: 2148 LVQKCMESAALLLVPLLVKIQVGSTW 2173
VQK MESAA L VPL+ + G W
Sbjct: 903 KVQKLMESAAALKVPLVAEAGHGDNW 928
>gi|288553689|ref|YP_003425624.1| DNA polymerase I [Bacillus pseudofirmus OF4]
gi|288544849|gb|ADC48732.1| DNA polymerase I [Bacillus pseudofirmus OF4]
Length = 875
Score = 233 bits (595), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 174/542 (32%), Positives = 261/542 (48%), Gaps = 72/542 (13%)
Query: 1649 LKDGID--MCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAH- 1705
L DG+D + + S++L P S + + A R G Q A +
Sbjct: 385 LLDGVDFDLLMASYLLDPSHS---------------SHDLSDIATRKGAKSIQADEAVYG 429
Query: 1706 NGCCRRVAQTRALC-------SVLWKL-------LVSEELIEALLNIEIPLVNVLADMEL 1751
G R+V +T L +V+++L L E E ++E+PL VL ME
Sbjct: 430 KGAKRKVPETDVLAEHLVRKANVIYELKERMEEELKKNEQFELFKDLEMPLSVVLGRMET 489
Query: 1752 WGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGH 1811
G+ VD++ L +L LEK + AG+ F++ + + VL+ L LP+ +
Sbjct: 490 EGVKVDIDQLKAMGEDLASRLAELEKHIHEHAGVSFNINSPKQLGEVLFEKLGLPVIK-- 547
Query: 1812 NKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLH 1871
K K ST L+ L +H I+ I +R L KL + + + + S +H
Sbjct: 548 -KTKTGYSTSADVLEKLAEDHEIIRHILHYRQLGKLNSTYIEGLVKVTHKGTSK----IH 602
Query: 1872 GHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQEN 1931
+ Q T TGRLS +PNLQ + +E + KI R FIPS+E
Sbjct: 603 TRFNQALTQTGRLSSTDPNLQNIPIRLE---------------EGRKI--RKAFIPSEEG 645
Query: 1932 WILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQT 1991
W +LAADYSQIELR++AH ++D LI K DV T A SE+ V S R
Sbjct: 646 WKILAADYSQIELRVLAHIAQDEKLITAF-KEDMDVHTKTAMDVFHVSEEDVTSMMRRSA 704
Query: 1992 KRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVES 2051
K + +GI+YG+ LS+ L + EA + I+ + +S+P VA ++ + + GYV +
Sbjct: 705 KAVNFGIVYGISDYGLSQSLGITRKEAAKFIERYLASYPNVAEYMERIIEEARENGYVST 764
Query: 2052 LKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSS 2111
L R+R+L ++ N ++S A+R A+N+ QG+AADIIK AM+
Sbjct: 765 LLNRRRYLPELTSRNFNQRSFAERTAMNTPIQGTAADIIKKAMV---------------E 809
Query: 2112 LAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGS 2171
+A + + RLLLQVHDEL+ EV P + E + +V + ME+A L VPL V I G
Sbjct: 810 MALRLEEANLKSRLLLQVHDELIFEVPPEEVDEMMKIVPEVMENAVELAVPLKVDISAGD 869
Query: 2172 TW 2173
TW
Sbjct: 870 TW 871
>gi|353251820|pdb|3TAN|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Duplex Dna With Cytosine-Adenine
Mismatch At (N-1) Position
gi|353251823|pdb|3TAP|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Duplex Dna With Cytosine-Adenine
Mismatch At (N-3) Position
gi|353251826|pdb|3TAQ|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Duplex Dna With Cytosine-Adenine
Mismatch At (N-4) Position
gi|353251829|pdb|3TAR|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Large
Fragment Bound To Duplex Dna With Cytosine-Adenine
Mismatch At (N-6) Position
gi|390136455|pdb|4DQS|A Chain A, Binary Complex Of Bacillus Dna Polymerase I Large Fragment
And Duplex Dna With Rc In Primer Terminus Paired With Dg
Of Template
Length = 592
Score = 233 bits (595), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 230/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 190 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 249
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 250 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 306
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 307 LLKVVR--PDTKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 347
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 348 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 404
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + +GI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 405 IFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 464
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 465 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 524
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 525 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 569
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 570 QAVTLRVPLKVDYHYGSTW 588
>gi|282848822|ref|ZP_06258215.1| DNA-directed DNA polymerase [Veillonella parvula ATCC 17745]
gi|416999201|ref|ZP_11939870.1| DNA-directed DNA polymerase [Veillonella parvula ACS-068-V-Sch12]
gi|282581476|gb|EFB86866.1| DNA-directed DNA polymerase [Veillonella parvula ATCC 17745]
gi|333977354|gb|EGL78213.1| DNA-directed DNA polymerase [Veillonella parvula ACS-068-V-Sch12]
Length = 873
Score = 233 bits (595), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 235/467 (50%), Gaps = 40/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
C V A+ V + EEL IE+PL++ L ME GI +D E +
Sbjct: 444 CVSMVKALLAMNEVACESARREELWSLYETIELPLIHTLVVMEKNGIYIDTEKLAETTAR 503
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+++L ++++ Y LAG F++ + + +L+ L LPI + K K STD LD+
Sbjct: 504 FKEELTQVQEEIYELAGETFNINSPKQLGVILFEKLNLPIIK---KTKTGYSTDAEVLDM 560
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
LRHE PIV I +R++AKL++ + C + ++ + + +H + Q TATGRLS
Sbjct: 561 LRHESPIVEKILAYRSVAKLVS----TYCEGLAVLINDKTHRIHTTFNQMVTATGRLSSS 616
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + E +I R F P L++ADYSQIELR++
Sbjct: 617 DPNLQNIPVRTE---KGREI--------------RALFYPGAGYDTLVSADYSQIELRIL 659
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D ALI + D+ AA G+S+D V S+ER K + +GI+YG+ L
Sbjct: 660 AHLSGDEALIKAFVEGK-DIHRFTAAEVLGKSQDEVTSEERSHAKAINFGIIYGISDFGL 718
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S L + EAK I + S +P V ++ V H+ G V ++ GR+R L I N
Sbjct: 719 SRDLGITRGEAKNYIDLYFSRYPKVKEYMDRMVQEAHETGKVRTMFGRQRELPDINSRNF 778
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK+AM + + NF RLLL
Sbjct: 779 NRRSFAERTAMNTPIQGTAADIIKLAMNQVEQKLE----------EQNFT-----SRLLL 823
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
QVHDELVLEV S ++ L++ M+S L VPL+V + W
Sbjct: 824 QVHDELVLEVVNSELEAIEELLRSTMQSVVELQVPLIVDVHHAENWA 870
>gi|386715049|ref|YP_006181372.1| DNA polymerase I [Halobacillus halophilus DSM 2266]
gi|384074605|emb|CCG46098.1| DNA polymerase I [Halobacillus halophilus DSM 2266]
Length = 881
Score = 233 bits (595), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 259/524 (49%), Gaps = 45/524 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEK---EVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCC 1709
D+ + S+++ P + P + E K + E + R +N H
Sbjct: 396 FDLLLASYLINPAENHHDIPAISHRMGESKVKYDEEVYGKGAKMKRPEND--NDFHEHIS 453
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
R+ L + L ++E +++E+PL +L ME G+ VD + + L+
Sbjct: 454 RKADMVYKLKDTVENELKNKEQYNLYMDLEMPLALILGRMEHRGVLVDQKRLEEMGAELE 513
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
+L +EK + LAG F+L + + +L+ L LP+ + K K ST L+ L
Sbjct: 514 SRLTAIEKDIFELAGESFNLNSPKQLGPILFEKLNLPVIK---KTKTGYSTSADVLEQLE 570
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
+H I+ I +R L KL + + + + I+ T K +H + Q T TGRLS EP
Sbjct: 571 DQHEIISSILMYRQLGKLKSTYIEGLLKV--INEDTHK--IHTRFNQALTQTGRLSSTEP 626
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + +E + KI R FIPS+ENW++ A+DYSQIELR++AH
Sbjct: 627 NLQNIPIRLE---------------EGRKI--RQAFIPSKENWVIFASDYSQIELRVLAH 669
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
++D LI + D+ T A+ G +++ V S+ R Q K + +GI+YG+ LS+
Sbjct: 670 IAQDEKLIEAFREGQ-DIHTQTASEVFGVAKEDVTSEMRRQAKAVNFGIVYGISDYGLSQ 728
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
L+ EA+ I + S+PGV +++ V Q GYV + R+R+L ++ N
Sbjct: 729 SLDIPRKEAQAFIDKYLESYPGVKTYMEETVQEAKQVGYVTTFMNRRRYLPELTSRNFNR 788
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
++ A+R A+N+ QGSAAD+IK AMI++ + + + +L A ++LLQV
Sbjct: 789 RNAAERTAMNTPIQGSAADVIKKAMIDLENRLA------EENLEA---------KMLLQV 833
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDEL+LE +++ +V ME L VPL V GSTW
Sbjct: 834 HDELILEAPEEEVEQLKEVVASVMEQTVKLDVPLKVDYSYGSTW 877
>gi|56459137|ref|YP_154418.1| DNA polymerase I [Idiomarina loihiensis L2TR]
gi|56178147|gb|AAV80869.1| DNA polymerase I [Idiomarina loihiensis L2TR]
Length = 921
Score = 233 bits (595), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 238/461 (51%), Gaps = 40/461 (8%)
Query: 1715 TRALCSVLWKLL--VSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
T L VLW + EL L +IE+PLV +L DME +G+ +D + + +KL
Sbjct: 495 TYRLHDVLWNKVKETGSELQSVLTDIEVPLVPILCDMEQYGVRIDANLLGKQSQEIAEKL 554
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
LEKKA+ +AG +F+L + + + + L+LPI + KG PST + L L H++
Sbjct: 555 DALEKKAFEIAGEEFNLGSPKQLQRIFFEKLELPIVKKTPKGA--PSTAEEVLHELAHDY 612
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
P+ VI +HR L+KL + + + I+ T + +H + Q TATGRLS +PNLQ
Sbjct: 613 PLPDVILQHRGLSKLKSTYTDKLPKM--INPDTGR--VHTSYQQAVTATGRLSSTDPNLQ 668
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
N I R FIP Q + ++A DYSQIELR+MAH S+
Sbjct: 669 -----------NIPIRTAEGR------RVRQAFIPEQ-GYKIVAIDYSQIELRIMAHLSQ 710
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D +L+ ++ D+ AA G D V + +R Q K + +G++YGM L+ QL
Sbjct: 711 DESLLKAFAEGL-DIHRATAAEVFGCKADEVSNDQRRQAKAVNFGLIYGMSAFGLARQLG 769
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ +EA+ + + FPGV ++ ++GYV++L GR+ L IK N +
Sbjct: 770 IARHEAQHYMDKYFERFPGVLRYMEDTRKQAKEQGYVKTLFGRRLPLPDIKASNGARRKG 829
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK AM+ + I + D R+L+QVHDE
Sbjct: 830 AERAAINAPMQGTAADIIKKAMLKVADWIDSNNCQDD-------------VRMLMQVHDE 876
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV E+ S + + + + + ME AA L VPL+ + G+ W
Sbjct: 877 LVFEIKESKLTDYIEQLTEVMEKAASLDVPLIAEAGKGNNW 917
>gi|294793595|ref|ZP_06758732.1| DNA polymerase I [Veillonella sp. 3_1_44]
gi|294455165|gb|EFG23537.1| DNA polymerase I [Veillonella sp. 3_1_44]
Length = 877
Score = 233 bits (595), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 235/467 (50%), Gaps = 40/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
C V A+ V + EEL IE+PL++ L ME GI +D E +
Sbjct: 448 CVSMVKALLAMNEVACESARREELWSLYETIELPLIHTLVVMEKNGIYIDTEKLAETTAR 507
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+++L ++++ Y LAG F++ + + +L+ L LPI + K K STD LD+
Sbjct: 508 FKEELTQVQEEIYELAGETFNINSPKQLGVILFEKLNLPIIK---KTKTGYSTDAEVLDM 564
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
LRHE PIV I +R++AKL++ + C + ++ + + +H + Q TATGRLS
Sbjct: 565 LRHESPIVEKILAYRSVAKLVS----TYCEGLAVLINDKTHRIHTTFNQMVTATGRLSSS 620
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + E +I R F P L++ADYSQIELR++
Sbjct: 621 DPNLQNIPVRTE---KGREI--------------RALFYPGAGYDTLVSADYSQIELRIL 663
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D ALI + D+ AA G+S+D V S+ER K + +GI+YG+ L
Sbjct: 664 AHLSGDEALIKAFVEGK-DIHRFTAAEVLGKSQDEVTSEERSHAKAINFGIIYGISDFGL 722
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S L + EAK I + S +P V ++ V H+ G V ++ GR+R L I N
Sbjct: 723 SRDLGITRGEAKNYIDLYFSRYPKVKEYMDRMVQEAHETGKVRTMFGRQRELPDINSRNF 782
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK+AM + + NF RLLL
Sbjct: 783 NRRSFAERTAMNTPIQGTAADIIKLAMNQVEQKLE----------EQNFT-----SRLLL 827
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
QVHDELVLEV S ++ L++ M+S L VPL+V + W
Sbjct: 828 QVHDELVLEVVNSELEAIEELLRSTMQSVVELQVPLIVDVHHAENWA 874
>gi|147678311|ref|YP_001212526.1| DNA polymerase I [Pelotomaculum thermopropionicum SI]
gi|146274408|dbj|BAF60157.1| DNA polymerase I - 3'-5' exonuclease and polymerase domains
[Pelotomaculum thermopropionicum SI]
Length = 882
Score = 233 bits (595), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 227/436 (52%), Gaps = 40/436 (9%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IEIPL +LA+ME+ G+ VD + L +++ L + Y L G +F++ + +
Sbjct: 481 IEIPLAGILAEMEIEGVAVDKKQLEAMSEELGRQIEKLADEIYRLTGREFNINSPKQLGK 540
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
VL+ LKLP+ + K K STD L+ L H V I E+R +AKL + + +
Sbjct: 541 VLFEDLKLPVIK---KTKTGYSTDADVLEELAAAHEAVAKILEYRQMAKLKSTYADGLAA 597
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
L I+ T K LH + QT T TGRLS +PNLQ + +E G
Sbjct: 598 L--INPETGK--LHTTFHQTVTNTGRLSSSDPNLQNIPIRLE---------AGRL----- 639
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R FIP + +LL ADYSQIELR++AH S DPALI K D+ T AA
Sbjct: 640 ---IRKVFIPGRPENLLLTADYSQIELRVLAHISGDPALIKAF-KNGEDIHTRTAAEIFA 695
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
+ V + R + K + +GI+YG+ L+ + S EA+ I+++ + + GV ++
Sbjct: 696 VRPEEVTREMRTRAKAVNFGIVYGLSDFGLARDIKVSRQEARRYIENYFARYAGVKDYIE 755
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
+ QKGYV +L R+R+L + N +S +R A+N+ QGSAADIIK+AM+NI
Sbjct: 756 RIIREARQKGYVTTLLNRRRYLPDLFSPNRTIRSFGERTAMNTPIQGSAADIIKLAMVNI 815
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA 2157
H + K +++LQVHDEL+ + I + LV++CME+A
Sbjct: 816 HRELAEHGLK---------------AKMILQVHDELIFDAPAVEIDQLKDLVKRCMENAL 860
Query: 2158 LLLVPLLVKIQVGSTW 2173
+L VPLLV+I+ G W
Sbjct: 861 VLEVPLLVEIKAGRNW 876
>gi|428778220|ref|YP_007170007.1| DNA polymerase I [Halothece sp. PCC 7418]
gi|428692499|gb|AFZ45793.1| DNA polymerase I [Halothece sp. PCC 7418]
Length = 958
Score = 233 bits (595), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 270/545 (49%), Gaps = 71/545 (13%)
Query: 1653 IDMCIVSWILWPDDERSSN-PNLEKEVKKRLSSEAAA--AANRSGRWKNQMRRAAHNGCC 1709
D + S++L P ER+ N +L LS+++ A + G + C
Sbjct: 457 FDTMLASYVLHP--ERNHNLSDLAARYLPDLSTQSYQELAIPKEGTIADLDMATVAEYCG 514
Query: 1710 RRVAQTRALCSVL-WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
T L +L +L +L + ++E PL VLADME WGI +D L
Sbjct: 515 MDAYVTYQLTQLLATELKAIPQLDQLFRDLERPLEPVLADMEYWGIRIDTAYLKTLSEEL 574
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
KL +E KAY LAG F+L + ++ +L+ L+L P+ K K ST+ L+ L
Sbjct: 575 GNKLEQIETKAYDLAGQTFNLNSPKQLSEILFEKLELN-PKKSRKTKTGYSTNHAILEKL 633
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
+ +HPI+ +I EHRTL+KL + + ++ +L ++ TQ+ ++ + Q T TGRLS
Sbjct: 634 QGDHPIIDLILEHRTLSKLKSTYVDALPNL--VNPDTQR--IYTDFNQAITTTGRLSSSN 689
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + EF R F+P +++W+L++ADYSQIELR++
Sbjct: 690 PNLQNIPIRTEFSR-----------------QIRRAFLP-EDDWLLVSADYSQIELRILT 731
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
HFS++ L+ + G + A+ ED V +ER K + +G++YGMGP +
Sbjct: 732 HFSQESILLD--AYQTGKDVHRVTAQLLFEKED-VTDEERRLGKTINFGVIYGMGPQRFA 788
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF---------- 2058
+ S+ KE I+ +++ +P V +L +GYVE+L GR+R+
Sbjct: 789 REAAVSNQRGKEFIEKYQARYPLVFEYLKNQKKRAIAQGYVETLLGRRRYFYFTSSPLDQ 848
Query: 2059 ----------LSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
S+IK G +++S+ R A N+ QGS+ADIIKIAM+ ++ ++ KP
Sbjct: 849 LKGSDPKTIDFSQIKIG--RDESETLRAAANAPIQGSSADIIKIAMVKLNELL-----KP 901
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
S RLLLQVHDELV E+ P E +Q ME+A L +PL V+I
Sbjct: 902 YQS------------RLLLQVHDELVFEIPPHEWDELRPQIQATMENAISLSIPLEVEIN 949
Query: 2169 VGSTW 2173
VG W
Sbjct: 950 VGKNW 954
>gi|406667470|ref|ZP_11075227.1| DNA polymerase I [Bacillus isronensis B3W22]
gi|405384674|gb|EKB44116.1| DNA polymerase I [Bacillus isronensis B3W22]
Length = 876
Score = 233 bits (595), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 166/522 (31%), Positives = 257/522 (49%), Gaps = 41/522 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D+ + S+IL P L KE + A + +W R+
Sbjct: 391 FDLLLASYILKPSISGDDVATLAKEFGYQDVQSNEAIYGKGAKWVVPGADHVAEHVSRKA 450
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
L +L + L E E +E+PL ++L ME GI V+++ Q + L+ KL
Sbjct: 451 VAVWKLQPLLEQKLKENEQFELYKELELPLAHILGKMESEGITVNIDTLRQMGDDLKAKL 510
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ +E Y LAG KF++ + + +L+ L LP+ + K K ST L+ L+ EH
Sbjct: 511 KVMEATIYELAGEKFNINSPKQLGVILFDKLGLPVIK---KTKTGYSTAADVLEKLQSEH 567
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I E+RTLAKL + + + + + +H + Q T+TGRLS PNLQ
Sbjct: 568 DIVKHILEYRTLAKLQSTYIEGLIK----EVHKEDSKVHTRFQQALTSTGRLSSTNPNLQ 623
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+++WIL AADYSQIELR++AH
Sbjct: 624 NIPIRLE---------------EGRKI--RKAFVPSKKDWILFAADYSQIELRVLAHMCG 666
Query: 1953 DPALIGLLSKPHGDVFTMIAAR-WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D AL+ + D+ T A + + D V S R K + +GI+YG+ LS+ L
Sbjct: 667 DDALVEAFQQGM-DIHTRTAMDVFNLENPDEVTSLMRRTAKAVNFGIVYGISDYGLSQSL 725
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ + EA I+++ SFPGV +++ ++ + G+V ++ R+R+L I N +S
Sbjct: 726 DITRKEAAIFIENYLQSFPGVKNYMDTSIEEAKKAGFVTTILNRRRYLPDITSSNFNLRS 785
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QGSAADIIK AMI+++ A + + +LLLQVHD
Sbjct: 786 FAERTAMNTPIQGSAADIIKKAMIDMN---------------ARLEQEGLQTKLLLQVHD 830
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I+ +V + ME+A L VPL V+ G+TW
Sbjct: 831 ELIFEAPKEEIEILERIVPEVMENAIKLSVPLKVEFSYGATW 872
>gi|385265800|ref|ZP_10043887.1| hypothetical protein MY7_2569 [Bacillus sp. 5B6]
gi|385150296|gb|EIF14233.1| hypothetical protein MY7_2569 [Bacillus sp. 5B6]
Length = 879
Score = 233 bits (595), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++I+ P + ++ KE + S+ A + + + + R+
Sbjct: 395 FDALLAAYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADHLARKA 454
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
+ +L L L +E ++E+PL +L +ME G+ VD+E + L+ KL
Sbjct: 455 SAVNSLRDKLLDALEENNQLELYEDLELPLALILGEMESMGVKVDVERLKRMGEELKAKL 514
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ E+K + +AG F++ + + +L+ L LP K K ST L+ L +H
Sbjct: 515 KEYEEKIHDIAGEPFNINSPKQLGVILFDKLGLP---PVKKTKTGYSTSADVLEKLADKH 571
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I ++R + KL + + + + R + +H + Q T TGRLS +PNLQ
Sbjct: 572 DIVAYILQYRQIGKLQSTYIEGLLKVTR----KDSHKVHTRFNQALTQTGRLSSTDPNLQ 627
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ AADYSQIELR++AH SK
Sbjct: 628 NIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHISK 670
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A SED V R Q K + +GI+YG+ LS+ L
Sbjct: 671 DENLIEAFTNDM-DIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGISDYGLSQNLG 729
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + SFPGV +++ +V QKGYV +L R+R++ ++ N +S
Sbjct: 730 ITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSF 789
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +AA + + RLLLQVHDE
Sbjct: 790 AERTAMNTPIQGSAADIIKKAMID---------------MAAELKEKNLKARLLLQVHDE 834
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ E I+ LV + ME A L VPL G +W
Sbjct: 835 LIFEAPKEEIEILEKLVPEVMEHALTLDVPLKADYASGPSW 875
>gi|407685815|ref|YP_006800988.1| DNA polymerase I [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407289195|gb|AFT93507.1| DNA polymerase I [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 930
Score = 233 bits (595), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 241/461 (52%), Gaps = 42/461 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L + +W KL EL L+++E+PL VL+ ME G+ +D + Q L ++
Sbjct: 506 TLRLHNAIWTKLKEIPELKNLLIDVEVPLACVLSRMEQEGVLIDSQRLRQQSQDLATRIA 565
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE + + AG F+L + + +VL+ + LPI + KG PST + L L E+P
Sbjct: 566 ELESEVHEEAGEPFNLGSTKQLQHVLFEKMSLPIIKKTPKGA--PSTSEDVLQELALEYP 623
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ I E+R L KL N + + I+ T + +H + Q TATGRLS +PNLQ
Sbjct: 624 LPKKIMEYRGLTKLKNTYTDKLPKM--INHRTGR--VHTSYHQAVTATGRLSSTDPNLQN 679
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ + NE+ R F+P + N +AADYSQIELR+MAH S D
Sbjct: 680 I------PIRNEE-----------GRRVRQAFVPREGNK-FVAADYSQIELRIMAHLSGD 721
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
L+ + HG D+ AA G D V +++R K + +G++YGM LS+QLN
Sbjct: 722 KGLLDAFA--HGKDIHKATAAEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLSKQLN 779
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
NEA++ + + +PGV ++ S +KGYVE++ GR+ +L IK N +
Sbjct: 780 IPRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKG 839
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK+AMI + I + ++S +++QVHDE
Sbjct: 840 AERAAINAPMQGTAADIIKMAMIKVDDWI-----RKNAS---------DDVTMMMQVHDE 885
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV E+ ++ VS + MESAA L VPL+V+ VG W
Sbjct: 886 LVFEIKEDKVETYVSTITALMESAATLNVPLVVEAGVGENW 926
>gi|385810110|ref|YP_005846506.1| DNA polymerase I [Ignavibacterium album JCM 16511]
gi|383802158|gb|AFH49238.1| DNA polymerase I [Ignavibacterium album JCM 16511]
Length = 922
Score = 233 bits (594), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 189/690 (27%), Positives = 306/690 (44%), Gaps = 102/690 (14%)
Query: 1492 INASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIH--GLAVCWENSPVYYVNLP 1549
+N D + + + EF FD +E + FEI G++ C E +++ +
Sbjct: 323 VNNQNDLDELVKHLKNSKEFVFD------TETDGLKPFEIKLAGVSFCTEPKKAFFIPI- 375
Query: 1550 KDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQI 1609
H ++ +SD+ + I + K+ + E + +RK N K I
Sbjct: 376 ----EPHENTG---LFSNSDRKAIP-------ISEFVKKFKSVFEDKSIRKICQNGKYDI 421
Query: 1610 QVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERS 1669
VL+H +S++ F D + S++L PD +
Sbjct: 422 AVLRHQNISVKNFY-----------------------------FDTMLASYVLDPDQKH- 451
Query: 1670 SNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLW 1723
N++ +K L+ + ++ G ++ + + N T L L
Sbjct: 452 ---NMDDLAQKYLNYKPIPLSDLIGTKQDPTKIFDVDIKVLSNYSAEDADITFRLYKKLD 508
Query: 1724 KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLA 1783
+ L E++ + +IE PLV VL ME GI +D E Q L+ + ++ Y LA
Sbjct: 509 EELKKEKIEKVAYDIEFPLVPVLESMEFEGIKIDTEALQQQSKDLELLMENYAQRIYQLA 568
Query: 1784 GMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRT 1843
G +F++ + + +L+ LKL K K STD L+ LR EH I+ +I +R
Sbjct: 569 GKEFNINSTKQLQEILFEKLKL---STGRKTKTGFSTDARSLENLRGEHEIIDIILNYRQ 625
Query: 1844 LAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMS 1903
+AKL + S+ +L ++ + +H + QT +TGRLS +PNLQ + + +
Sbjct: 626 VAKLKSTYTDSLPNL----INPKTGRIHTSFNQTGASTGRLSSIDPNLQNIP--IRTDLG 679
Query: 1904 NEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP 1963
E R FIP N ++L+ADYSQIELR+MA +D L+
Sbjct: 680 KE---------------IRKAFIPRDRNHLILSADYSQIELRIMASICEDETLMKAFING 724
Query: 1964 HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIK 2023
D+ AA + V R + K + +GILYG+GP L +L AKE I
Sbjct: 725 E-DIHRSTAALVFNVKPEDVTPDMRRKAKEVNFGILYGIGPFGLKTRLGIPQTHAKEIID 783
Query: 2024 SFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQ 2083
++ +F V ++ ++ +KGY E+L GR+R+L I N + +R A+N Q
Sbjct: 784 TYFRTFKKVKDFMDDSILKAKEKGYAETLYGRRRYLKNINSNNRVVRQFEERVAINMPIQ 843
Query: 2084 GSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIK 2143
G+AAD+IK+AMI IH+ + YK +++LQVHDELV + S I
Sbjct: 844 GTAADMIKLAMIKIHNELEKKKYK---------------TKMVLQVHDELVFDAHKSEID 888
Query: 2144 EAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E +++K ME A L VP++ I VG W
Sbjct: 889 ELKPIIKKIMEEAFPLKVPVVADIGVGENW 918
>gi|334145909|ref|YP_004508836.1| DNA polymerase I [Porphyromonas gingivalis TDC60]
gi|333803063|dbj|BAK24270.1| DNA polymerase I [Porphyromonas gingivalis TDC60]
Length = 926
Score = 233 bits (594), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 198/686 (28%), Positives = 308/686 (44%), Gaps = 119/686 (17%)
Query: 1499 DCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRR 1558
DC + + AT F FD D + ++ + +C E+ +++ LP+D RR
Sbjct: 345 DC-IRIFSATPCFSFDTETDSKDALRANIV----AITLCAESGRAFFIPLPEDEEIGKRR 399
Query: 1559 KDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVS 1618
D +L P + + K NMK IQVL
Sbjct: 400 LD-----------LLRP----------------LFADTAIGKVGQNMKYDIQVL------ 426
Query: 1619 IQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEV 1678
+ G+E G F D I ++L+PD N+++
Sbjct: 427 -----------SRYGIEVRGQLF------------DTMIAHYLLFPDLRH----NMDEMA 459
Query: 1679 KKRLSSEAAAAANRSGRWKNQ--MRRAAHNGCCRRVAQTRALCSVLWKL------LVSEE 1730
+ L ++ G K + +R+ + + W+L ++SE
Sbjct: 460 ETLLGYCTIHYSDLVGSDKQEVHIRQVPLQNLADYAMED---ADITWQLYERLDAMLSEA 516
Query: 1731 LIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSL 1789
+ +L +IE+PLV VLADME G+ +D E + + L ++++ +E + Y LAG F++
Sbjct: 517 GMTSLFESIEMPLVPVLADMERSGVKLDTEVLRRTASGLGEEMQRIEDEIYRLAGHSFNI 576
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
+ + + VL+ L++ K + ST++ L L+ +HPIV +I ++R + KLL+
Sbjct: 577 NSPSQVGTVLFEELQITEKPKKTKSGSY-STNEEILVKLQEKHPIVRLILDYRGIKKLLS 635
Query: 1850 CTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG 1909
+ ++ M LH + QT TGRLS PNLQ + E
Sbjct: 636 TYVEALPE-----MRYPDGKLHTSFNQTVATTGRLSSSNPNLQNIPIRTEVGR------- 683
Query: 1910 GNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVF 1968
R F+P + I ++ADYSQIELRLMAH S+D +LI HG D+
Sbjct: 684 ----------GLRAAFVPDNDECIFMSADYSQIELRLMAHLSEDESLIQAFL--HGEDIH 731
Query: 1969 TMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSS 2028
A++ V R + K +GI+YG+ LSE+LN S EAK I+ + +S
Sbjct: 732 RATASKIYRLPLVEVTDDMRRRAKTANFGIIYGISAFGLSERLNISRTEAKALIEGYFAS 791
Query: 2029 FPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAAD 2088
+PGV +++ +++ ++GYV +L GRKRFL I N + A+R A+N+ QGSAAD
Sbjct: 792 YPGVKAYMDRSIAEAKRQGYVTTLFGRKRFLRDINSANAVVRGYAERNAINAPIQGSAAD 851
Query: 2089 IIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSL 2148
+IK+AMI IH I K R R++LQVHDEL V E L
Sbjct: 852 LIKLAMIRIHEEITER---------------KLRSRMILQVHDELNFNVLCPEAAEVREL 896
Query: 2149 VQKCMESAAL-LLVPLLVKIQVGSTW 2173
V+ CME L VPL+ +I G+ W
Sbjct: 897 VRSCMEGVMPSLRVPLIAEIGEGANW 922
>gi|428779271|ref|YP_007171057.1| DNA polymerase I [Dactylococcopsis salina PCC 8305]
gi|428693550|gb|AFZ49700.1| DNA polymerase I [Dactylococcopsis salina PCC 8305]
Length = 974
Score = 233 bits (594), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 239/456 (52%), Gaps = 65/456 (14%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IEIPL VLA+ME WGI +D E + KL +E KAY LAG F+L + ++
Sbjct: 560 IEIPLEPVLAEMEYWGIKIDTEYLNHLSQEIGSKLEAIETKAYELAGEAFNLNSPKQLSK 619
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ L L + K K ST+ L+ L+ +HPI+ I EHRTL+KL + + ++
Sbjct: 620 ILFEKLDLN-KKKSRKTKTGYSTNHAILEKLQGDHPIIDFILEHRTLSKLKSTYVDALPD 678
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
L ++ TQ+ ++ + Q T TGRLS PNLQ + +F
Sbjct: 679 L--VNNKTQR--IYTDFNQAVTTTGRLSSSNPNLQNIPIRTDFSR--------------- 719
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R F+P +E+W+L++ADYSQIELR++ HFS++P L+ + DV + A
Sbjct: 720 --QIRRAFLP-EEDWLLVSADYSQIELRILTHFSQEPILLDAY-QTGKDVHRVTAKLLFE 775
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
+ E V +++R K + +G++YGMG + ++ ++ E IK ++S +P V +L
Sbjct: 776 KEE--VTTEQRRLGKTINFGVIYGMGSQRFAREVAMTNQEGDAFIKKYRSRYPLVFEYLE 833
Query: 2038 VAVSSCHQKGYVESLKGRKRF--------------------LSKIKFGNNKEKSKAQRQA 2077
+ KGYVE+L GR+R+ L+ IK G K++S+ R A
Sbjct: 834 TQKKNAITKGYVETLLGRRRYFYFTGSALDRFKGSDPNTVDLASIKLG--KDESETLRAA 891
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
N+ QGS+ADIIKIAM+ ++ ++ YK RLLLQVHDELV E+
Sbjct: 892 ANAPIQGSSADIIKIAMVKLNELL--APYK---------------SRLLLQVHDELVFEI 934
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
P +E +++ ME+A L VPL V+I+VG W
Sbjct: 935 PPQEWEELRPKIKETMENAVALSVPLEVEIKVGKNW 970
>gi|393199925|ref|YP_006461767.1| DNA polymerase I [Solibacillus silvestris StLB046]
gi|327439256|dbj|BAK15621.1| DNA polymerase I [Solibacillus silvestris StLB046]
Length = 876
Score = 233 bits (594), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 166/522 (31%), Positives = 256/522 (49%), Gaps = 41/522 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D+ + S+IL P L KE + A + +W R+
Sbjct: 391 FDLLLASYILKPSISGDDVATLAKEFGYQDVQSNEAIYGKGAKWVVPGADHVAEHVSRKA 450
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
L +L + L E E +E+PL ++L ME GI V+++ Q + L+ KL
Sbjct: 451 VAVWKLQPLLDQKLKENEQFELYKELELPLAHILGKMESEGITVNIDTLRQMGDDLKAKL 510
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+E Y LAG KF++ + + +L+ L LP+ + K K ST L+ L+ EH
Sbjct: 511 EVMEATIYELAGEKFNINSPKQLGVILFDKLGLPVIK---KTKTGYSTAADVLEKLQSEH 567
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I E+RTLAKL + + + + + +H + Q T+TGRLS PNLQ
Sbjct: 568 DIVKYILEYRTLAKLQSTYIEGLIK----EVHKEDSKVHTRFQQALTSTGRLSSTNPNLQ 623
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+++WIL AADYSQIELR++AH
Sbjct: 624 NIPIRLE---------------EGRKI--RKAFVPSKKDWILFAADYSQIELRVLAHMCG 666
Query: 1953 DPALIGLLSKPHGDVFTMIAAR-WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D AL+ + D+ T A + + D V S R K + +GI+YG+ LS+ L
Sbjct: 667 DEALVEAFQQGM-DIHTRTAMDVFNLENPDEVTSLMRRTAKAVNFGIVYGISDYGLSQSL 725
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ + EA I+++ SFPGV +++ ++ + G+V ++ R+R+L I N +S
Sbjct: 726 DITRKEAAIFIENYLQSFPGVKNYMDTSIEEAKKAGFVTTILNRRRYLPDITSSNFNLRS 785
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QGSAADIIK AMI+++ A + + +LLLQVHD
Sbjct: 786 FAERTAMNTPIQGSAADIIKKAMIDMN---------------ARLEQEGLQTKLLLQVHD 830
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ E I+ +V + ME+A L VPL V+ G+TW
Sbjct: 831 ELIFEAPKEEIEILERIVPEVMENAIKLSVPLKVEFSYGATW 872
>gi|220929491|ref|YP_002506400.1| DNA polymerase I [Clostridium cellulolyticum H10]
gi|219999819|gb|ACL76420.1| DNA polymerase I [Clostridium cellulolyticum H10]
Length = 896
Score = 233 bits (594), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 174/584 (29%), Positives = 283/584 (48%), Gaps = 71/584 (12%)
Query: 1591 EIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLK 1650
EI E +D+ K+ ++K + LK + LENV
Sbjct: 379 EIFESKDIEKYGHDLKNLYKYLKSHGIE---------------LENVI------------ 411
Query: 1651 DGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNG-CC 1709
D I ++IL P + L ++ K+ + ++ G+ Q + + + C
Sbjct: 412 --FDTFIAAYILEPTRSTYTISELSEDKLKQSITPVEILYDKHGKRLEQGQDVSSSEVCA 469
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
V L L ++ E IE+PLV VLA+MEL G VD+E L
Sbjct: 470 AAVNAIYGLTQKLRPIIRDNGQDELYYKIELPLVEVLANMELRGFKVDVENLKAYSKELD 529
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
+L LE + Y AG F++ + + +L+ L LP+ + K K ST L+ L
Sbjct: 530 SRLVILENEIYMQAGETFNINSPKQLGVILFEKLGLPVGK---KTKTGYSTSAEVLEQLS 586
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
++H IV I E+R L KL S + +S+ Q +H ++ QT TATGR+S EP
Sbjct: 587 YKHEIVERILEYRQLMKL-----KSTYADGLLSVLEQDGKIHSNFNQTVTATGRISSTEP 641
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + V+ +M + R FIP+ +++LL ADYSQIELR++AH
Sbjct: 642 NLQNIP--VKLEMGRK---------------IRKVFIPTNSDYVLLDADYSQIELRVLAH 684
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
+ DP +I + D+ T A++ G + V S R + K + +GI+YG+G +LS+
Sbjct: 685 ITGDPNMIEAFIN-NEDIHTTTASKVFGIPPEEVSSLMRSRAKAVNFGIVYGIGDFSLSK 743
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
+ + EA++ I + + V ++ V + G+V +L R+R+L ++K N
Sbjct: 744 DIGVTKKEARKYIDDYLDKYSKVKEYMSDTVEKGKEFGFVTTLYNRRRYLPELKSSNFNM 803
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S +R A+N+ QGSAADIIKI+M+ +++ + K + +L+LQV
Sbjct: 804 RSFGERVAMNTPIQGSAADIIKISMVKVYT---------------ELKKRKLKSKLILQV 848
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDEL++E + S ++E L++ CME+A L VPL V ++ G +W
Sbjct: 849 HDELIVETEKSELEEVSKLLKDCMENAVQLKVPLTVDVKHGDSW 892
>gi|4389065|pdb|3BDP|A Chain A, Dna Polymerase IDNA COMPLEX
gi|4389072|pdb|4BDP|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Fragment
Complexed To 11 Base Pairs Of Duplex Dna After Addition
Of Two Datp Residues
gi|4389123|pdb|2BDP|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Fragment
Complexed To 9 Base Pairs Of Duplex Dna
Length = 580
Score = 233 bits (594), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 230/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 178 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 237
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 238 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 294
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 295 LLKVVR--PDTKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 335
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 336 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 392
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + +GI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 393 IFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 452
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 453 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 512
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 513 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 557
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 558 QAVTLRVPLKVDYHYGSTW 576
>gi|332981757|ref|YP_004463198.1| DNA polymerase I [Mahella australiensis 50-1 BON]
gi|332699435|gb|AEE96376.1| DNA polymerase I [Mahella australiensis 50-1 BON]
Length = 850
Score = 233 bits (594), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 260/521 (49%), Gaps = 63/521 (12%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D I +++L P SN ++++ VK+ L + AA++ W+
Sbjct: 389 FDAMIAAYLLDP---SQSNYDIKRLVKQYLEIDDDAASHAGYLWR--------------- 430
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
L +++ + E+ +IE+PL VLADME+ G VD++ + + ++ +
Sbjct: 431 -----LMNIMLPQIKENEMNALFYDIEMPLTRVLADMEINGFTVDVQMLKELADDFERMI 485
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
L K+ Y LAG +F++ + + +L+ LKLP+ + K K STD L L+ +H
Sbjct: 486 DGLTKEIYALAGEEFNINSPKQLGAILFEKLKLPVGK---KTKTGYSTDIEVLKQLQLQH 542
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IVP I ++R L KL + + + ++A + +H + QT T TGR+S EPNLQ
Sbjct: 543 DIVPKIIDYRQLTKLKSTYIDGLMNMA----DPITHKIHSKFNQTVTVTGRISSTEPNLQ 598
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ E+ H R F+PS +++LL ADYSQIELR++AH S+
Sbjct: 599 NIP--------------VKTELGH---QIRKAFVPSSSDYLLLDADYSQIELRVLAHMSQ 641
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D +I K D+ A+ G + V R + K + +GI+YG+ L+ +
Sbjct: 642 DQNMIDAFLKGQ-DIHARTASEVFGIPLEQVTPLMRSRAKAVNFGIVYGISDFGLARNIG 700
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
S +EAK+ I+ + + + GV ++ + + GYV ++ R+R+L ++ N +S
Sbjct: 701 ISRSEAKQYIEQYFARYNGVRRFMDETIQFAKKHGYVTTMFKRRRYLPELASSNRTVRSF 760
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
+R A+N+ QG+AADIIK AM++I++ + Y R +L+LQVHDE
Sbjct: 761 GERAAMNTPIQGTAADIIKKAMVDIYNALKENEY---------------RSKLILQVHDE 805
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L++EV + E LV+ ME + VPL+ I VG W
Sbjct: 806 LIIEVHRDEVDEIRDLVKDKMEGVVKMDVPLVADIHVGENW 846
>gi|383788576|ref|YP_005473145.1| DNA polymerase I [Caldisericum exile AZM16c01]
gi|381364213|dbj|BAL81042.1| DNA polymerase I [Caldisericum exile AZM16c01]
Length = 852
Score = 233 bits (594), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 231/439 (52%), Gaps = 48/439 (10%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
NIE+PL VL +ME GI +D+E + + + +++ LE+K Y LAG+ F++ ++ ++
Sbjct: 457 NIELPLAKVLYNMEKLGIAIDVEYFERLNDEIDARIQELEQKIYKLAGISFNILSSKQLS 516
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+VLY L + P+G++ G T L + + HPI+P+I E+R L KL N + I
Sbjct: 517 SVLYEVLGIEFPKGYSGG-----TGSSILTEISNSHPIIPLIIEYRHLVKLKNTYIEPIP 571
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
L +S + LH + Q T+TGRL PNLQ + +D +G +
Sbjct: 572 HL----VSKETGRLHTIYHQIGTSTGRLRSTNPNLQ--------NLPVKDEWGNKIQRG- 618
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI-GLLSKPHGDVFTMIAARW 1975
FI EN +L++ADYSQIELR++AH SKD LI L+K D+ A
Sbjct: 619 --------FIAQGENNVLVSADYSQIELRILAHLSKDKNLIESFLNKE--DIHKRTAMEI 668
Query: 1976 TGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASW 2035
E V ++R+ K + +GI+YG+ P LS+Q+ S +EAKE I+ + + +P V +
Sbjct: 669 FNLKESEVTKEKRNLAKAINFGIIYGISPYGLSKQIGISKDEAKEYIERYFNRYPMVREY 728
Query: 2036 LHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMI 2095
+ + +KG ++ GR+RF+ + N + A+R A+NS QGSAADIIK+AM+
Sbjct: 729 IEKEIVLAKEKGETRTIFGRRRFIHGLDDKNGVIRESAKRIAINSPIQGSAADIIKLAMV 788
Query: 2096 NIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES 2155
I + I R+LLQ+HDELV E+ + E + L++ ME+
Sbjct: 789 EIENKI-------------------KDIRILLQIHDELVFEIKRDALIEKLPLIKNTMEN 829
Query: 2156 AALLLVPLLVKIQVGSTWG 2174
L VPL V I G G
Sbjct: 830 ICKLSVPLEVDISYGRNLG 848
>gi|325954851|ref|YP_004238511.1| DNA polymerase I [Weeksella virosa DSM 16922]
gi|323437469|gb|ADX67933.1| DNA polymerase I [Weeksella virosa DSM 16922]
Length = 941
Score = 233 bits (594), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 238/443 (53%), Gaps = 40/443 (9%)
Query: 1731 LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
L + NIE+PL+ VLA ME+ GI +D++ Q Q+K++ LE+K ++ AG +F+L
Sbjct: 535 LTKLFRNIEMPLMKVLATMEIEGIRLDVDFLQQLSKKHQEKIKELEQKIFSEAGEEFNLN 594
Query: 1791 TAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNC 1850
+ + ++L+ LKL K Q+ ST + L L H +PI+ I +R L KL +
Sbjct: 595 SPKQLGDILFDKLKLEPKSKKTKTGQY-STGEEILSKLAH-YPIIKNILHYRQLQKLKST 652
Query: 1851 TLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGG 1910
+ ++ L ++ TQ+ +H + QT ATGRLS PNLQ + E + I
Sbjct: 653 YIDALPEL--VNPVTQR--VHTTFAQTVAATGRLSSVNPNLQNIPIRTE---EGQQI--- 702
Query: 1911 NAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
R FI + +++ADYSQIELRL+A ++DP ++ D+
Sbjct: 703 -----------RKAFIARNPEYKIISADYSQIELRLIAQMAQDPVMVKAFQDGE-DIHAS 750
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFP 2030
AA+ G + D V ++R Q K + +GI+YG+ L++Q S+ EAK+ I ++ ++P
Sbjct: 751 TAAKIFGVALDEVTREQRSQAKTVNFGIIYGVSAFGLAQQTGLSNTEAKKLIDAYYETYP 810
Query: 2031 GVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADII 2090
+ ++ ++S + G+VE+L R+R+L I NN +S A+R AVN+ QGSAADI+
Sbjct: 811 TLKKYIDQQIASARENGFVETLMRRRRYLKDINSRNNTVRSHAERNAVNAPIQGSAADIV 870
Query: 2091 KIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQ 2150
K+AMI I + D A ++LLQVHDELV + S ++E +++
Sbjct: 871 KLAMIQIQKEL-------DKKFA---------TKMLLQVHDELVFDAPISEVEEVSKMIK 914
Query: 2151 KCMESAALLLVPLLVKIQVGSTW 2173
MES + VPL+ ++ VG W
Sbjct: 915 TTMESVIQMEVPLVAEVGVGDNW 937
>gi|29726425|pdb|1LV5|A Chain A, Crystal Structure Of The Closed Conformation Of Bacillus Dna
Polymerase I Fragment Bound To Dna And Dctp
gi|29726426|pdb|1LV5|B Chain B, Crystal Structure Of The Closed Conformation Of Bacillus Dna
Polymerase I Fragment Bound To Dna And Dctp
Length = 580
Score = 233 bits (594), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 230/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 178 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 237
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 238 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 294
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 295 LLKVVR--PDTKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 335
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 336 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 392
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + +GI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 393 IFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 452
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 453 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 512
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 513 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 557
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 558 QAVTLRVPLKVDYHYGSTW 576
>gi|55670162|pdb|1U45|A Chain A, 8oxoguanine At The Pre-Insertion Site Of The Polymerase
Active Site
gi|55670165|pdb|1U47|A Chain A, Cytosine-8-Oxoguanine Base Pair At The Polymerase Active
Site
gi|55670168|pdb|1U48|A Chain A, Extension Of A Cytosine-8-Oxoguanine Base Pair
gi|55670171|pdb|1U49|A Chain A, Adenine-8oxoguanine Mismatch At The Polymerase Active Site
gi|55670174|pdb|1U4B|A Chain A, Extension Of An Adenine-8oxoguanine Mismatch
gi|55670297|pdb|1UA0|A Chain A, Aminofluorene Dna Adduct At The Pre-Insertion Site Of A Dna
Polymerase
gi|55670300|pdb|1UA1|A Chain A, Structure Of Aminofluorene Adduct Paired Opposite Cytosine
At The Polymerase Active Site
Length = 580
Score = 233 bits (594), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 230/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 178 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 237
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 238 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 294
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 295 LLKVVR--PDTKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 335
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 336 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 392
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + +GI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 393 IFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 452
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 453 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 512
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 513 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 557
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 558 QAVTLRVPLKVDYHYGSTW 576
>gi|122920392|pdb|2HHQ|A Chain A, O6-Methyl-Guanine:t Pair In The Polymerase-10 Basepair
Position
gi|122920396|pdb|2HHS|A Chain A, O6-Methyl:c Pair In The Polymerase-10 Basepair Position
gi|122920400|pdb|2HHT|A Chain A, C:o6-Methyl-Guanine Pair In The Polymerase-2 Basepair
Position
gi|122920414|pdb|2HHU|A Chain A, C:o6-Methyl-Guanine In The Polymerase Postinsertion Site (-
1 Basepair Position)
gi|122920417|pdb|2HHV|A Chain A, T:o6-Methyl-Guanine In The Polymerase-2 Basepair Position
gi|122920428|pdb|2HHX|A Chain A, O6-Methyl-Guanine In The Polymerase Template Preinsertion
Site
gi|122920472|pdb|2HW3|A Chain A, T:o6-Methyl-Guanine Pair In The Polymerase Postinsertion
Site (-1 Basepair Position)
Length = 580
Score = 233 bits (594), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 230/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 178 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 237
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 238 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 294
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 295 LLKVVR--PDTKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 335
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 336 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 392
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + +GI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 393 IFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 452
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 453 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 512
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 513 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 557
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 558 QAVTLRVPLKVDYHYGSTW 576
>gi|34541416|ref|NP_905895.1| DNA polymerase type I [Porphyromonas gingivalis W83]
gi|419970557|ref|ZP_14486043.1| DNA-directed DNA polymerase [Porphyromonas gingivalis W50]
gi|34397733|gb|AAQ66794.1| DNA polymerase type I [Porphyromonas gingivalis W83]
gi|392610503|gb|EIW93281.1| DNA-directed DNA polymerase [Porphyromonas gingivalis W50]
Length = 926
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 197/686 (28%), Positives = 308/686 (44%), Gaps = 119/686 (17%)
Query: 1499 DCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRR 1558
DC + + AT F FD D + ++ + +C E+ +++ LP+D RR
Sbjct: 345 DC-IRMFSATPCFSFDTETDSKDALRANIV----AITLCAESGRAFFIPLPEDEEIGKRR 399
Query: 1559 KDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVS 1618
D +L P + + K NMK IQVL
Sbjct: 400 LD-----------LLRP----------------LFADTAIGKVGQNMKYDIQVL------ 426
Query: 1619 IQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEV 1678
+ G+E G F D I ++L+PD N+++
Sbjct: 427 -----------SRYGIEVRGQLF------------DTMIAHYLLFPDLRH----NMDEMA 459
Query: 1679 KKRLSSEAAAAANRSGRWKNQ--MRRAAHNGCCRRVAQTRALCSVLWKL------LVSEE 1730
+ L ++ G K + +R+ + + W+L ++SE
Sbjct: 460 ETLLGYCTVHYSDLVGSDKQEVHIRQVPLQNLADYAMED---ADITWQLYERLNAMLSEA 516
Query: 1731 LIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSL 1789
+ +L +IE+PLV VLA+ME G+ +D E + + L ++++ +E + Y LAG F++
Sbjct: 517 GMTSLFESIEMPLVPVLANMERSGVKLDTEVLRRTASGLGEEMQRIEDEIYRLAGHSFNI 576
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
+ + + VL+ L++ K + ST++ L L+ +HPIV +I ++R + KLL+
Sbjct: 577 NSPSQVGTVLFEELQITEKPKKTKSGSY-STNEEILVKLQEKHPIVRLILDYRGIKKLLS 635
Query: 1850 CTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG 1909
+ ++ M LH + QT TGRLS PNLQ + E
Sbjct: 636 TYVEALPE-----MRYPDGKLHTSFNQTVATTGRLSSSNPNLQNIPIRTEVGR------- 683
Query: 1910 GNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVF 1968
R F+P + I ++ADYSQIELRLMAH S+D +LI HG D+
Sbjct: 684 ----------GLRAAFVPDNDECIFMSADYSQIELRLMAHLSEDESLIQAFL--HGEDIH 731
Query: 1969 TMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSS 2028
A++ V R + K +GI+YG+ LSE+LN S EAK I+ + +S
Sbjct: 732 RATASKIYRLPLVEVTDDMRRRAKTANFGIIYGISAFGLSERLNISRTEAKALIEGYFAS 791
Query: 2029 FPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAAD 2088
+PGV +++ +++ ++GYV +L GRKRFL I N + A+R A+N+ QGSAAD
Sbjct: 792 YPGVKAYMDRSIAEAKRQGYVTTLFGRKRFLRDINSANAVVRGYAERNAINAPIQGSAAD 851
Query: 2089 IIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSL 2148
+IK+AMI IH I K R R++LQVHDEL V E L
Sbjct: 852 LIKLAMIRIHEEITER---------------KLRSRMILQVHDELNFNVLRPEAAEVREL 896
Query: 2149 VQKCMESA-ALLLVPLLVKIQVGSTW 2173
V+ CME L VPL+ +I G+ W
Sbjct: 897 VRSCMEGVMPSLRVPLIAEIGEGANW 922
>gi|29726371|pdb|1L3S|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Fragment
Complexed To 9 Base Pairs Of Duplex Dna.
gi|29726374|pdb|1L3T|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Fragment
Product Complex With 10 Base Pairs Of Duplex Dna
Following Addition Of A Single Dttp Residue
gi|29726377|pdb|1L3U|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Fragment
Product Complex With 11 Base Pairs Of Duplex Dna
Following Addition Of A Dttp And A Datp Residue.
gi|29726380|pdb|1L3V|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Fragment
Product Complex With 15 Base Pairs Of Duplex Dna
Following Addition Of Dttp, Datp, Dctp, And Dgtp
Residues.
gi|29726383|pdb|1L5U|A Chain A, Crystal Structure Of Bacillus Dna Polymerase I Fragment
Product Complex With 12 Base Pairs Of Duplex Dna
Following Addition Of A Dttp, A Datp, And A Dctp Residue.
gi|47168372|pdb|1NJW|A Chain A, Guanine-Thymine Mismatch At The Polymerase Active Site
gi|47168375|pdb|1NJX|A Chain A, Thymine-Guanine Mismatch At The Polymerase Active Site
gi|47168378|pdb|1NJY|A Chain A, Thymine-Thymine Mismatch At The Polymerase Active Site
gi|47168381|pdb|1NJZ|A Chain A, Cytosine-thymine Mismatch At The Polymerase Active Site
gi|47168384|pdb|1NK0|A Chain A, Adenine-Guanine Mismatch At The Polymerase Active Site
gi|47168387|pdb|1NK4|A Chain A, Guanine-Guanine Mismatch At The Polymerase Active Site
gi|47168390|pdb|1NK5|A Chain A, Adenine-Adenine Mismatch At The Polymerase Active Site
gi|47168393|pdb|1NK6|A Chain A, Cytosine-Cytosine Mismatch At The Polymerase Active Site
gi|47168396|pdb|1NK7|A Chain A, Guanine-Adenine Mismatch At The Polymerase Active Site
gi|47168399|pdb|1NK8|A Chain A, A Bacillus Dna Polymerase I Product Complex Bound To A
Guanine-Thymine Mismatch After A Single Round Of Primer
Extension, Following Incorporation Of Dctp.
gi|47168402|pdb|1NK9|A Chain A, A Bacillus Dna Polymerase I Product Complex Bound To A
Guanine-Thymine Mismatch After Two Rounds Of Primer
Extension, Following Incorporation Of Dctp And Dgtp.
gi|47168405|pdb|1NKB|A Chain A, A Bacillus Dna Polymerase I Product Complex Bound To A
Guanine-Thymine Mismatch After Three Rounds Of Primer
Extension, Following Incorporation Of Dctp, Dgtp, And
Dttp.
gi|47168408|pdb|1NKC|A Chain A, A Bacillus Dna Polymerase I Product Complex Bound To A
Guanine-Thymine Mismatch After Five Rounds Of Primer
Extension, Following Incorporation Of Dctp, Dgtp, Dttp,
And Datp.
gi|47168411|pdb|1NKE|A Chain A, A Bacillus Dna Polymerase I Product Complex Bound To A
Cytosine-Thymine Mismatch After A Single Round Of Primer
Extension, Following Incorporation Of Dctp.
gi|58177300|pdb|1XC9|A Chain A, Structure Of A High-Fidelity Polymerase Bound To A
Benzo[a]pyrene Adduct That Blocks Replication
gi|157834270|pdb|1XWL|A Chain A, Bacillus Stearothermophilus (Newly Identified Strain As Yet
Unnamed) Dna Polymerase Fragment
Length = 580
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 230/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 178 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 237
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 238 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 294
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 295 LLKVVR--PDTKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 335
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 336 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 392
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + +GI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 393 IFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 452
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 453 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 512
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 513 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 557
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 558 QAVTLRVPLKVDYHYGSTW 576
>gi|406595017|ref|YP_006746147.1| DNA polymerase I [Alteromonas macleodii ATCC 27126]
gi|406372338|gb|AFS35593.1| DNA polymerase I [Alteromonas macleodii ATCC 27126]
Length = 930
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 241/461 (52%), Gaps = 42/461 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L + +W KL EL L+++E+PL VL+ ME G+ +D + Q L ++
Sbjct: 506 TLRLHNAIWTKLKEIPELKNLLIDVEVPLACVLSRMEQEGVLIDSQRLRQQSQDLATRIA 565
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE + + AG F+L + + +VL+ + LPI + KG PST + L L E+P
Sbjct: 566 ELESEVHEEAGEPFNLGSTKQLQHVLFEKMSLPIIKKTPKGA--PSTSEDVLQELALEYP 623
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ I E+R L KL N + + I+ T + +H + Q TATGRLS +PNLQ
Sbjct: 624 LPKKIMEYRGLTKLKNTYTDKLPKM--INHRTGR--VHTSYHQAVTATGRLSSTDPNLQN 679
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ + NE+ R F+P + N +AADYSQIELR+MAH S D
Sbjct: 680 I------PIRNEE-----------GRRVRQAFVPREGNK-FVAADYSQIELRIMAHLSGD 721
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
L+ + HG D+ AA G D V +++R K + +G++YGM LS+QLN
Sbjct: 722 KGLLDAFA--HGKDIHKATAAEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLSKQLN 779
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
NEA++ + + +PGV ++ S +KGYVE++ GR+ +L IK N +
Sbjct: 780 IPRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKG 839
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK+AMI + I + ++S +++QVHDE
Sbjct: 840 AERAAINAPMQGTAADIIKMAMIKVDDWI-----RKNAS---------DDVTMMMQVHDE 885
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV E+ ++ VS + MESAA L VPL+V+ VG W
Sbjct: 886 LVFEIREDKVETYVSTITALMESAATLNVPLVVEAGVGENW 926
>gi|334366159|ref|ZP_08515100.1| DNA-directed DNA polymerase [Alistipes sp. HGB5]
gi|313157640|gb|EFR57054.1| DNA-directed DNA polymerase [Alistipes sp. HGB5]
Length = 958
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 235/440 (53%), Gaps = 41/440 (9%)
Query: 1736 LNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG-MKFSLYTAAD 1794
IE P++ VLAD+E+ G+ +D E L ++L LE AG + ++ +A
Sbjct: 554 FEIEEPMIAVLADIEMAGVRIDSEALAVYSVELSRRLAELEAAICEEAGESQLNINSARQ 613
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ VL+G +++ K KQ TD+ L H+H IV +I E+R + KLL+ + +
Sbjct: 614 LGEVLFGKMRIAEKPKMTKTKQF-CTDEDYLQSFAHKHRIVDLILEYRGVKKLLSTYVEA 672
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ L ++ + +H + Q TATGRLS PNLQ + V +M
Sbjct: 673 LPQL----VNRRTGRIHTSFNQAVTATGRLSSTNPNLQNIP--VREEMGR---------- 716
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAA 1973
R FIPS E +LL+ADYSQ+ELRLMAH S D +LI + HG D+ AA
Sbjct: 717 -----RIRRAFIPSDEEHLLLSADYSQVELRLMAHLSGDESLIAAFA--HGEDIHAATAA 769
Query: 1974 RWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVA 2033
+ ++ D V S+ER + K +GI+YG+ LS++L EAKE I + +S+P V
Sbjct: 770 KLFNKTLDEVTSEERRRAKTANFGIIYGISAFGLSQRLEIPRKEAKEIIDGYFASYPKVQ 829
Query: 2034 SWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIA 2093
++ V+ ++G+V ++ GR+R+L+ I N + A+R AVN+ QGSAADI+KIA
Sbjct: 830 EYMDNVVAKAKEEGFVSTIFGRRRYLNDIASHNAIARGLAERNAVNAPIQGSAADIMKIA 889
Query: 2094 MINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCM 2153
MIN+H F R +++LQVHDELV+++ S + V++V + M
Sbjct: 890 MINVHR---------------RFAAEGIRSKVILQVHDELVVDMLRSEQERVVAIVTEAM 934
Query: 2154 ESAALLLVPLLVKIQVGSTW 2173
ESAA L V L+V VG W
Sbjct: 935 ESAAALKVRLVVDYGVGGNW 954
>gi|307717956|ref|YP_003873488.1| DNA polymerase I [Spirochaeta thermophila DSM 6192]
gi|38146989|gb|AAR11879.1| DNA polymerase I [Spirochaeta thermophila DSM 6578]
gi|306531681|gb|ADN01215.1| DNA polymerase I [Spirochaeta thermophila DSM 6192]
Length = 897
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 239/457 (52%), Gaps = 41/457 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L VL + L +E L +E+PL+++LA ME WGIG+D E L++++ +EK
Sbjct: 479 LSRVLKERLEAEGLGRVFYEMEMPLLSILARMEEWGIGLDGEALSAFGRELEERISTIEK 538
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ + L G +F++ + + VL+ LP K K STD L+ L P+
Sbjct: 539 EIFELVGHEFNVGSTKQLQEVLFVERGLP---PVKKTKTGFSTDTSVLEELAARDPVAAK 595
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
+ E+R+L KL N + + L ++ T + LH + Q TATGRLS ++PNLQ +
Sbjct: 596 VLEYRSLTKLKNTYVDVLPGL--VNPGTGR--LHTWFSQVGTATGRLSSKDPNLQNIPIK 651
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
E + +I R+ F+P Q W L+ADYSQIEL ++AH S+DPAL
Sbjct: 652 TE---------------EGRRI--REAFVP-QRGWWFLSADYSQIELVILAHLSEDPALC 693
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
+ DV + G ++V ++R K + +G++YGM LS +L E
Sbjct: 694 RAFREGE-DVHRATGSLLFGVPPEAVTPEQRRIAKTINFGVIYGMSAFRLSRELGIPRKE 752
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
A+ I ++ +++ GV +++ ++ +KGYV +L GRKR L I N +K+ A+R A
Sbjct: 753 AERFIDAYFTTYAGVRAFIERTIAEAEEKGYVTTLFGRKRPLPYITSRNKTQKTGAERIA 812
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
VN+ QGS ADIIK+AMI+ L A + + R++LQVHDEL+ EV
Sbjct: 813 VNTPIQGSGADIIKLAMID---------------LDAQMRRMGLASRMILQVHDELIFEV 857
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
P ++ LV++ ME L VPL V++ VG WG
Sbjct: 858 PPEELEVMKRLVRERMEGVVRLSVPLRVEMGVGRNWG 894
>gi|332288906|ref|YP_004419758.1| DNA polymerase I [Gallibacterium anatis UMN179]
gi|330431802|gb|AEC16861.1| DNA polymerase I [Gallibacterium anatis UMN179]
Length = 925
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 239/461 (51%), Gaps = 44/461 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VLW +L + L++ +E+PL VLA ME G+ +D + Q + +L
Sbjct: 503 TFKLHQVLWPQLNQTPSLVKLFTEVELPLSQVLARMERNGVLIDSDLLYQQSQEINARLI 562
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE++A+ LAG F+L + + +L+G L LP+ + KG PST++ L+ L +EH
Sbjct: 563 QLEQQAHQLAGQAFNLASTKQLQEILFGKLGLPVLKKTPKGA--PSTNEEVLEELAYEHE 620
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ ++ EHR +KL + + + I +T + +H + Q T TGRLS +PNLQ
Sbjct: 621 LPKLLVEHRGFSKLKSTYTDKLPQM--IDPNTGR--VHTSYHQAVTITGRLSSSDPNLQN 676
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E + KI R FI Q + ++AADYSQIELR+MAH S D
Sbjct: 677 IPTRSE---------------EGRKI--RQAFIAPQ-GFKVVAADYSQIELRIMAHLSAD 718
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
L S HG DV AA + V SQ+R + K + +G++YGM L+ QL
Sbjct: 719 AGLAYAFS--HGLDVHRSTAAEVFDVPLEQVTSQQRYRAKAINFGLIYGMSAFGLARQLQ 776
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
NEA+ I + +PGV +++ Q+GYVE+L GR+ +L ++K N +
Sbjct: 777 IPRNEAQTYIDRYFHRYPGVKQFMNDIQEKAKQQGYVETLLGRRLYLPELKSSNGMRRKA 836
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK AMI+I I K R+++QVHDE
Sbjct: 837 AERVAINAPMQGTAADIIKKAMIDIDRFIAD----------------KNDIRMIMQVHDE 880
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV EV ++ +++ ME+A L VPL+V++ G W
Sbjct: 881 LVFEVKEDKVEYYEKIIKDMMENAVKLSVPLIVEVNFGDNW 921
>gi|427406333|ref|ZP_18896538.1| DNA polymerase I [Selenomonas sp. F0473]
gi|425709174|gb|EKU72213.1| DNA polymerase I [Selenomonas sp. F0473]
Length = 890
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 230/458 (50%), Gaps = 40/458 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L + LW L L +E+PLV VLA ME G+ V+ + +++ +E+
Sbjct: 469 LYAPLWAALAQANLTRLYAEMELPLVPVLAAMERTGVAVNRAALARELAAASERIAEIER 528
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
Y LAG +F++ + + VL+ L L P+ K K ST+ L+ LR HP+V
Sbjct: 529 DIYALAGEEFNISSPKQLGEVLFDRLGLTSPK-MKKTKTGYSTNAEVLEELRAAHPVVNK 587
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
+ +R +K+ + L I +L R + +H + Q TATGRLS +PNLQ +
Sbjct: 588 VLAYRMWSKIRSTYLEGIGALIR----PETGRVHTSFNQMVTATGRLSSSDPNLQNIPVR 643
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
E G A R F P + LL+ADYSQIELR++AH S D LI
Sbjct: 644 TE---------EGRA--------VRALFEPGEGYDALLSADYSQIELRILAHMSGDETLI 686
Query: 1958 GLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSN 2016
HG D+ A+ G S V S +R K + +GI+YG+ LS+ L S
Sbjct: 687 DAFL--HGQDIHARTASEVLGVSLAEVTSAQRRSAKAVNFGIVYGLSDYGLSQDLGISRK 744
Query: 2017 EAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQ 2076
EA I+ + + GV ++L V+ H+ GYV +L GR+R L I N ++S A+R
Sbjct: 745 EAASYIERYFERYRGVRAFLDKVVADAHRDGYVTTLYGRRRALPAINSRNFMQRSNAERM 804
Query: 2077 AVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLE 2136
A+N+ QG+AAD+IKIAMI + D +L A K + R+LLQVHDELVLE
Sbjct: 805 AMNTPIQGTAADLIKIAMI-----------RADEALRAA----KLKSRILLQVHDELVLE 849
Query: 2137 VDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
V I + SL+Q+ M AA L VPL V + G W
Sbjct: 850 VVGDEIPQVTSLLQEAMSGAAALSVPLAVDVHTGKNWA 887
>gi|28211720|ref|NP_782664.1| DNA polymerase I [Clostridium tetani E88]
gi|28204162|gb|AAO36601.1| DNA polymerase I [Clostridium tetani E88]
Length = 882
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 241/468 (51%), Gaps = 47/468 (10%)
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
R + LC+ L + +++ E+ + +E+PL VLA+MEL G VD E L
Sbjct: 455 IRETSLLEKLCANLKEQIINLEMEKLYYEVELPLAFVLANMELEGFKVDGEMLENIGKKL 514
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
Q+++ ++K+ Y LA +F++ + + +L+ L LP+ + K K ST+ L++L
Sbjct: 515 QREIEKVQKEIYELADEEFNVNSPKQLGKILFEKLDLPVIK---KTKTGYSTNAQVLEVL 571
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
+HPI+ I +R L KL + + + ++ + +H + QT T TGRLS E
Sbjct: 572 EDKHPIISKIGYYRQLTKLYSTYVEGLKNVI-----DEDGRIHSSFNQTVTTTGRLSSTE 626
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + ++++M E R F+P+ EN I+L+ADYSQIELR++A
Sbjct: 627 PNLQNIP--IKYEMGRE---------------VRKVFVPNYENSIILSADYSQIELRVLA 669
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H + D LI K H D+ T A+ D V R K + +GI+YG+G +L+
Sbjct: 670 HIADDENLINAF-KHHADIHTKTASEVFKVPIDEVTVNMRGNAKAVNFGIVYGIGDFSLA 728
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
+ L S EAK I ++ +P V ++ + + YV ++ R+RF+ +I N
Sbjct: 729 KDLKISRKEAKGYIDTYFERYPNVKKYMDETIDKAKRDMYVTTILNRRRFIPEIGNKNKI 788
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR---CRL 2125
K+ +R A+N+ QGSAADIIK+AM+ + F +LK R ++
Sbjct: 789 VKALGERLAMNTPIQGSAADIIKMAMVKV------------------FNVLKERDLKSKI 830
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+LQVHDEL+L V ++E S+V+ ME+ L VPL V I G W
Sbjct: 831 ILQVHDELILNVYKDELEEIKSIVKDSMENVLPLSVPLEVDINEGENW 878
>gi|375363320|ref|YP_005131359.1| DNA polymerase I [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|371569314|emb|CCF06164.1| DNA polymerase I [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
Length = 879
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++I+ P + ++ KE + S+ A + + + + R+
Sbjct: 395 FDALLAAYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADHLARKA 454
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
+ +L L L +E ++E+PL +L +ME G+ VD+E + L+ KL
Sbjct: 455 SAVNSLRDKLLDALEENNQLELYEDLELPLALILGEMESMGVKVDVERLKRMGEELKAKL 514
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ E+K + +AG F++ + + +L+ L LP K K ST L+ L +H
Sbjct: 515 KEYEEKIHDIAGEPFNINSPKQLGVILFEKLGLP---PVKKTKTGYSTSADVLEKLADKH 571
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I ++R + KL + + + + R + +H + Q T TGRLS +PNLQ
Sbjct: 572 DIVAYILQYRQIGKLQSTYIEGLLKVTR----KDSHKVHTRFNQALTQTGRLSSTDPNLQ 627
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ AADYSQIELR++AH SK
Sbjct: 628 NIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHISK 670
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A SED V R Q K + +GI+YG+ LS+ L
Sbjct: 671 DENLIEAFTNDM-DIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGISDYGLSQNLG 729
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + SFPGV +++ +V QKGYV +L R+R++ ++ N +S
Sbjct: 730 ITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSF 789
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +AA + + RLLLQVHDE
Sbjct: 790 AERTAMNTPIQGSAADIIKKAMID---------------MAAELKEKNLKARLLLQVHDE 834
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ E I+ LV + ME A L VPL G +W
Sbjct: 835 LIFEAPKEEIEILEKLVPEVMEHALALDVPLKADYASGPSW 875
>gi|254412782|ref|ZP_05026555.1| DNA polymerase I superfamily [Coleofasciculus chthonoplastes PCC
7420]
gi|196180517|gb|EDX75508.1| DNA polymerase I superfamily [Coleofasciculus chthonoplastes PCC
7420]
Length = 984
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 273/564 (48%), Gaps = 67/564 (11%)
Query: 1634 LENVGSSFLLLSPVHLKDG---IDMCIVSWILWPDDERSSNPNLEKEVKK-RLSSEAAAA 1689
L+NV L+L +K +D + S++L PD+ + N E+ + +L S
Sbjct: 460 LQNVKFDRLVLRTQGIKLAGVVMDTMLASYVLNPDNSHNLNSLTERYFPQIQLKSYKDLK 519
Query: 1690 ANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPLVNVLAD 1748
+ + N C +V T L L + L + IE LL +E PL VLA
Sbjct: 520 IPKGKTIAELSSKTVANYCGMQVYATFKLVPKLREKLEAIPAIEKLLLEVEQPLEPVLAQ 579
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIP 1808
ME GI +D + L+KKL +E+ AY AG +F+L + ++ +L+ L L
Sbjct: 580 MEYQGIRIDTAYLKELSESLEKKLVDIEQNAYKQAGEEFNLGSPKQLSELLFEKLNLDRR 639
Query: 1809 EGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKY 1868
+ K K STD L+ L+ +HP++ I EHRTL+KL + + ++ L + TQ+
Sbjct: 640 KSR-KMKTGYSTDHATLEKLQGDHPVIDTILEHRTLSKLKSTYVDALPKL--VHKDTQR- 695
Query: 1869 TLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+H + QT T+TGRLS PNLQ + F R F+P
Sbjct: 696 -IHTDFNQTITSTGRLSSSNPNLQNIPIRTAFSR-----------------QIRKAFLP- 736
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
+ W+L++ADYSQIELR++AH S++P L+ + + D+ + A + ++V +ER
Sbjct: 737 ESGWLLVSADYSQIELRILAHLSQEPVLVETY-RNNQDIHAVTAKLLFEK--ETVTPEER 793
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
K + +G++YGMGP + + S+ E KE I K +P V +L KGY
Sbjct: 794 RLGKTINFGVIYGMGPQRFAREAGVSAAEGKEFIDRLKQRYPKVFGYLEQMKGDAIAKGY 853
Query: 2049 VESLKGRKRF-------LSKIKFGNNKE------------KSKAQRQAVNSICQGSAADI 2089
VE++ GR+R+ L K N +E S R A N+ QGS+ADI
Sbjct: 854 VETILGRRRYFEFNSNRLRDAKGKNPQEIDLDEFKGIGQYDSGLLRAAANAPIQGSSADI 913
Query: 2090 IKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLV 2149
IKIAM+ +H ++ ++Q RLLLQVHDELV EV P +E +
Sbjct: 914 IKIAMVKMHEVL------------QDYQ-----ARLLLQVHDELVFEVPPDEWEELQPKI 956
Query: 2150 QKCMESAALLLVPLLVKIQVGSTW 2173
++ MESA L VPL+V + G W
Sbjct: 957 RETMESAVELTVPLVVDVSEGENW 980
>gi|336114638|ref|YP_004569405.1| DNA polymerase I [Bacillus coagulans 2-6]
gi|335368068|gb|AEH54019.1| DNA polymerase I [Bacillus coagulans 2-6]
Length = 888
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/524 (31%), Positives = 251/524 (47%), Gaps = 45/524 (8%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEK--EVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCC 1709
G D+ +VS++L P D ++ K + + EA + + R A H
Sbjct: 404 GFDLLLVSYLLNPSDTVEDFASVAKTHDYGNVETDEAVYGKGAKRKLPGEKRYAEH--IS 461
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
R+ ALC K L +E +E+PL +LADME G+ VD + + +
Sbjct: 462 RKAEAIDALCEPCTKALKDNGQLELFEQLELPLSLILADMEYIGVKVDTDRLKEMGEEFK 521
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
+L +E++ Y++AG +F++ + + +L+ + LP+ K K ST L+ L
Sbjct: 522 LRLHEIEQRIYSMAGTEFNINSPKQLGAILFEKMGLPVI---KKTKTGYSTSADVLEKLE 578
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
H IV I +R L KL + + + + + +H + Q T TGRLS +P
Sbjct: 579 PAHEIVREILHYRQLGKLQSTYIEGLLKVVH-----RDGKVHTRFNQALTQTGRLSSTDP 633
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + +E + KI R F+PS+E W++ ++DYSQ+ELR++AH
Sbjct: 634 NLQNIPIRME---------------EGRKI--RQAFVPSEEGWLIFSSDYSQVELRVLAH 676
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
S D LI + D+ T A + V + R Q K + +GI+YG+ LS+
Sbjct: 677 ISGDEKLIEAF-REGMDIHTKTAMEVFHVKAEEVTPEMRRQAKAVNFGIVYGISDYGLSQ 735
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
L + EA E IK + +S+P V ++ V QKGYV +L R+R+L +I N
Sbjct: 736 NLGITRKEAGEFIKRYFASYPRVKEYMDETVREAKQKGYVSTLLKRRRYLPEISSRNFNL 795
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+S A+R A+N+ QGSAADIIK AMI+ +A + K R RLLLQV
Sbjct: 796 RSFAERTAMNTPIQGSAADIIKKAMID---------------MAKRLKKEKLRARLLLQV 840
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDEL+ E I+ +V + ME A L PL V G TW
Sbjct: 841 HDELIFEAPEEEIEVLKEIVPEVMEHAVDLAAPLKVDSAYGPTW 884
>gi|384266458|ref|YP_005422165.1| DNA polymerase I [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387899498|ref|YP_006329794.1| DNA polymerase I [Bacillus amyloliquefaciens Y2]
gi|380499811|emb|CCG50849.1| DNA polymerase I [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387173608|gb|AFJ63069.1| DNA polymerase I [Bacillus amyloliquefaciens Y2]
Length = 879
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++I+ P + ++ KE + S+ A + + + + R+
Sbjct: 395 FDALLAAYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADHLARKA 454
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
+ +L L L +E ++E+PL +L +ME G+ VD+E + L+ KL
Sbjct: 455 SAVNSLRDKLLHALEENNQLELYEDLELPLALILGEMESMGVKVDVERLKRMGEELKAKL 514
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ E+K + +AG F++ + + +L+ L LP K K ST L+ L +H
Sbjct: 515 KEYEEKIHDIAGEPFNINSPKQLGVILFEKLGLP---PVKKTKTGYSTSADVLEKLADKH 571
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I ++R + KL + + + + R + +H + Q T TGRLS +PNLQ
Sbjct: 572 DIVAYILQYRQIGKLQSTYIEGLLKVTR----KDSHKVHTRFNQALTQTGRLSSTDPNLQ 627
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ AADYSQIELR++AH SK
Sbjct: 628 NIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHISK 670
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A SED V R Q K + +GI+YG+ LS+ L
Sbjct: 671 DENLIEAFTNDM-DIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGISDYGLSQNLG 729
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + SFPGV +++ +V QKGYV +L R+R++ ++ N +S
Sbjct: 730 ITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSF 789
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +AA + + RLLLQVHDE
Sbjct: 790 AERTAMNTPIQGSAADIIKKAMID---------------MAAELKEKNLKARLLLQVHDE 834
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ E I+ LV + ME A L VPL G +W
Sbjct: 835 LIFEAPKEEIEILEKLVPEVMEHALALDVPLKADYASGPSW 875
>gi|357010982|ref|ZP_09075981.1| PolA [Paenibacillus elgii B69]
Length = 895
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 172/523 (32%), Positives = 253/523 (48%), Gaps = 42/523 (8%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
G D + ++L P + + L R + ++K CR+
Sbjct: 410 GFDALLAGYLLDPTESSLTLDGLTSRYGLRPLPADEEVFGKGAKFKVPEEDVLTAYLCRK 469
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
A L L + L + E+ +E+PL VLA ME GI VD E L +
Sbjct: 470 AAAVHRLTPKLKEALETSEMHPLFYELELPLALVLASMERKGIKVDAEELKAYGAELGNQ 529
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L + + Y AG++F++ + + +L+ L LP+ + K K STD L+ L
Sbjct: 530 LEGIMQSIYDAAGIEFNINSPKQLGEILFEKLGLPVIK---KTKTGYSTDAEVLEKLEPY 586
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
HP++ I +RTLAKL + + + L + ST K +H ++ QT ATGRLS + PNL
Sbjct: 587 HPMIGHILHYRTLAKLQSTYVEGL--LKEVRPSTGK--VHTYYKQTIAATGRLSSQYPNL 642
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F PS+ W +L ADYSQIELR++AH S
Sbjct: 643 QNIPIRLE---------------EGRKI--RKVFFPSEPGWKILTADYSQIELRVLAHIS 685
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
+D LI + + DV T A G SE V S R Q K + +GI+YG+ LS+ L
Sbjct: 686 QDEKLIEAF-RENMDVHTKTAMDVFGVSEAEVDSNMRRQAKAVNFGIVYGISDYGLSQNL 744
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ + +A + I+ + + F GV ++ V Q GYV +L R+R+L +I N +S
Sbjct: 745 HITRKDAAKFIEQYFAVFQGVRQYMDDIVKKARQDGYVTTLLQRRRYLPEITASNFNLRS 804
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINI-HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
A+R A+N+ QG+AADIIK+AM+ + + + GV R R+LLQVH
Sbjct: 805 FAERTAMNTPIQGTAADIIKLAMVQLDNRMKEEGV----------------RSRMLLQVH 848
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DELV EV I +V + MESA L VPL V + G W
Sbjct: 849 DELVFEVPEEEIDLMKRMVAEVMESALKLDVPLKVDVDAGDNW 891
>gi|304383743|ref|ZP_07366202.1| DNA-directed DNA polymerase I [Prevotella marshii DSM 16973]
gi|304335267|gb|EFM01538.1| DNA-directed DNA polymerase I [Prevotella marshii DSM 16973]
Length = 920
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 189/649 (29%), Positives = 301/649 (46%), Gaps = 102/649 (15%)
Query: 1530 EIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRI 1589
E+ GL+ E +YV +P D R++ ++ N+ P ++ E I ++
Sbjct: 365 ELVGLSFAVEERQAFYVPVPAD-----RKEAEKIV------NIFKPLYESEAIM----KV 409
Query: 1590 GEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHL 1649
G+ NMK ++VL++ V ++ G+ F
Sbjct: 410 GQ------------NMKYDLEVLRNYGVCLR-----------------GALF-------- 432
Query: 1650 KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSS-EAAAAANRSGRWKNQMRRAAHNGC 1708
D I +++ P E N + EV + G+ + MR +
Sbjct: 433 ----DTMIAHYLIQP--ELRHNMDYMAEVYLNYQTIHIDTLIGAKGKHQKSMRELSPAQV 486
Query: 1709 CRRVAQ----TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQA 1764
A+ T L +VL L E E IE+PLV VLA+ME+ G+ +D + +
Sbjct: 487 YEYAAEDADITLQLKNVLEPKLREVEAEELFYQIEMPLVPVLAEMEMNGVRIDTQSLKET 546
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHC 1824
++L +++ LE + Y LAG +F++ + + ++L+G +K+ K Q+ T +
Sbjct: 547 SDILTRRMHDLEARIYELAGGEFNIASPKQVGDMLFGRMKIIDKPKKTKTGQY-VTSEEV 605
Query: 1825 LDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRL 1884
L LR +H IV I ++R L KLL + ++ L ++T+ +H + QT TATGRL
Sbjct: 606 LQQLRGKHEIVGDILDYRGLKKLLGTYVDALPKL----INTRTGRIHTSFNQTVTATGRL 661
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S EPNLQ + + ED E+ R FIP +E + +ADYSQIEL
Sbjct: 662 SSSEPNLQNI------PVRGED----GKEI-------RKAFIP-EEGCLFFSADYSQIEL 703
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH S D +I + + D+ AA+ GR+ + V ER + KR +GI+YG+
Sbjct: 704 RVMAHLSGDAHMIEAFREGY-DIHAATAAKIYGRAVEDVTRDERTKAKRANFGIIYGITV 762
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
L+E+L+ NEAK+ I + FP V ++ + GYVE++ R+R+L I
Sbjct: 763 FGLAERLDIDRNEAKQLIDGYFMMFPQVKDYMEHSKEVARTHGYVETIFHRRRYLPDINS 822
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QGSAADIIK+AMI I+ F R +
Sbjct: 823 HNATVRGFAERNAINAPIQGSAADIIKVAMIRIYR---------------RFMKEGIRSK 867
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++LQVHDEL V P + +V + M+ A L VPL+ G+ W
Sbjct: 868 MILQVHDELNFSVFPEEKERVERIVMEEMQQAYPLRVPLVADSGWGTNW 916
>gi|315658046|ref|ZP_07910919.1| DNA-directed DNA polymerase I [Staphylococcus lugdunensis M23590]
gi|315496936|gb|EFU85258.1| DNA-directed DNA polymerase I [Staphylococcus lugdunensis M23590]
Length = 877
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 239/454 (52%), Gaps = 43/454 (9%)
Query: 1721 VLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAY 1780
++ +L ++ L N+E+PL +LADME GI D+ + +N LQ+KL L + Y
Sbjct: 462 LMSDILSDHNQMDLLNNLELPLARILADMEETGIYTDVNDLKEMQNELQEKLDNLVSEIY 521
Query: 1781 TLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKE 1840
AG F++ + + VL+ LKLPI + K K ST L+ L+ +HPI+ I E
Sbjct: 522 EAAGESFNINSPKQLGIVLFETLKLPIIK---KTKTGYSTAVDVLEQLQGKHPIIDYILE 578
Query: 1841 HRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEF 1900
+R L+KL + + L ++ Q+ +H + QT TGRLS +PNLQ + +E
Sbjct: 579 YRQLSKLQSTY---VEGLQKVISDDQR--IHTRFNQTLAQTGRLSSIDPNLQNIPIRLE- 632
Query: 1901 KMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLL 1960
+ KI R F P+ +++++L+ADYSQIELR++AH ++D +L
Sbjct: 633 --------------EGRKI--RKAFKPTSDDYVILSADYSQIELRVLAHMTQDESLKEAF 676
Query: 1961 SKPHGD-VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAK 2019
HGD + A + G +D V R Q K + +GI+YG+ LS+ L + +AK
Sbjct: 677 --IHGDDIHAATAMKVFGVEKDQVNDLMRRQAKAVNFGIVYGISDYGLSQNLGITRKKAK 734
Query: 2020 EKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVN 2079
I + +SFPGV ++ V GYVE+L R+R++ I N +S A+R A+N
Sbjct: 735 AFIDDYLASFPGVKQYMTDIVKDAKANGYVETLLHRRRYIPDITSRNFNLRSFAERTAMN 794
Query: 2080 SICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDP 2139
+ QGSAADIIK+AM+ N + +LLLQVHDEL+ EV
Sbjct: 795 TPIQGSAADIIKLAMV---------------QFDKNVRETNYHAKLLLQVHDELIFEVPK 839
Query: 2140 SVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
S +++ V++ M++A L VPLLV G+TW
Sbjct: 840 SEVQDFSEFVEEIMDNALTLAVPLLVDSSYGATW 873
>gi|430746078|ref|YP_007205207.1| DNA polymerase I [Singulisphaera acidiphila DSM 18658]
gi|430017798|gb|AGA29512.1| DNA polymerase I [Singulisphaera acidiphila DSM 18658]
Length = 899
Score = 232 bits (592), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 272/555 (49%), Gaps = 53/555 (9%)
Query: 1635 ENVGSSFLLLSPVHLKDG---IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAAN 1691
+N+ L+LS ++ G D ++S++L + N NL++ + L +
Sbjct: 385 QNLKYDMLVLSRYGIEIGGPITDTMVLSYLL---ESGERNHNLDQLAHRFLDHTMVPISE 441
Query: 1692 RSGRWKNQ-------MRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVN 1744
G+ K Q + R AH A R L ++L + E L +E PL+
Sbjct: 442 LIGKGKTQKTMDQVEVARVAHYAGEDADATWR-LEAILAAKVRDEGLWPLYDELERPLIT 500
Query: 1745 VLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLK 1804
VLA ME GI VD+ + +L +E + YTLAG F++ + + VL+ LK
Sbjct: 501 VLAKMETAGIKVDVPLLSRLSKEFGDRLDTIEAEIYTLAGRSFNIGSGPQLRQVLFEELK 560
Query: 1805 LPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMS 1864
LP + G+ PST + L+ L +HP+ ++ +HR LAKL + L S+ L +
Sbjct: 561 LPSLQKTPGGE--PSTAQEVLEELAAKHPLPRLLIQHRQLAKLKSTYLDSLPGL----VH 614
Query: 1865 TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDF 1924
+H + Q TATGRLS +PNLQ + E D +I R
Sbjct: 615 PGDGRVHASFNQGVTATGRLSSSDPNLQNIPVRTE---------------DGRQI--RQA 657
Query: 1925 FIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVG 1984
F+ E W LL ADYSQIELR++AHFS DPAL + H D+ ++A+R G +E +V
Sbjct: 658 FVAGAEGWSLLTADYSQIELRILAHFSGDPALRQAFADDH-DIHRVVASRIFGVTESAVD 716
Query: 1985 SQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCH 2044
S R K + +G+LYG+ P L+ +L S +A I+++ + GV +++ + +
Sbjct: 717 SAMRRVAKTVNFGVLYGLSPYGLAGRLGISQTDAAAFIEAYFQEYEGVDTFITRTLETAL 776
Query: 2045 QKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGG 2104
G VE++ GR+R ++ IK ++ A+R AVN++ QGSAAD+IK AM+ + I
Sbjct: 777 ASGRVETILGRRRPINGIKNTTGHNRNVAERTAVNTVIQGSAADLIKRAMLVVDREI--- 833
Query: 2105 VYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLL 2164
Q L+ R+LLQ+HDEL+ E I LV+ M A L VPL
Sbjct: 834 ----------RTQGLQ--ARMLLQIHDELIFEAPSEEIARLAPLVRDAMTGALTLDVPLK 881
Query: 2165 VKIQVGSTWGSLEPF 2179
V + VG W ++P
Sbjct: 882 VDLAVGPNWLDVQPL 896
>gi|410859668|ref|YP_006974902.1| DNA polymerase I [Alteromonas macleodii AltDE1]
gi|410816930|gb|AFV83547.1| DNA polymerase I [Alteromonas macleodii AltDE1]
Length = 930
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 241/461 (52%), Gaps = 42/461 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L +++W KL EL L+++E+PL VL+ ME G+ +D + Q L ++
Sbjct: 506 TLRLHNIIWAKLKEIPELKNLLIDVEVPLACVLSRMEQEGVLIDSQRLSQQSQDLAARIA 565
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LEK+ + AG F+L + + ++L+ + LPI + KG PST + L L E+P
Sbjct: 566 ELEKEVHEEAGEPFNLGSTKQLQHILFEKMSLPIIKKTPKGA--PSTSEDVLQELALEYP 623
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ I E+R L KL N + + I+ T + +H + Q TATGRLS +PNLQ
Sbjct: 624 LPKKIMEYRGLTKLKNTYTDKLPKM--INHRTGR--VHTSYHQAITATGRLSSTDPNLQN 679
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ + NE+ R F+P + N +AADYSQIELR+MAH S D
Sbjct: 680 I------PIRNEE-----------GRRVRQAFVPRKGNK-FVAADYSQIELRIMAHLSGD 721
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
L+ + HG D+ A+ G D V +++R K + +G++YGM L++QLN
Sbjct: 722 KGLLDAFA--HGKDIHKATASEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLAKQLN 779
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
NEA++ + + +PGV ++ S +KGYVE++ GR+ +L IK N +
Sbjct: 780 IPRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKG 839
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK+AMI + I S AA+ +++QVHDE
Sbjct: 840 AERAAINAPMQGTAADIIKMAMIKVDDWI--------SKNAAD------DVTMMMQVHDE 885
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV E+ + V + MESAA L VPL+V+ VG W
Sbjct: 886 LVFEIKEDKVDSYVKTINTLMESAATLNVPLVVEAGVGENW 926
>gi|289550552|ref|YP_003471456.1| DNA polymerase I [Staphylococcus lugdunensis HKU09-01]
gi|385784181|ref|YP_005760354.1| DNA polymerase I [Staphylococcus lugdunensis N920143]
gi|418413857|ref|ZP_12987073.1| DNA polymerase I [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|289180084|gb|ADC87329.1| DNA polymerase I [Staphylococcus lugdunensis HKU09-01]
gi|339894437|emb|CCB53715.1| DNA polymerase I [Staphylococcus lugdunensis N920143]
gi|410877495|gb|EKS25387.1| DNA polymerase I [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 877
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 239/454 (52%), Gaps = 43/454 (9%)
Query: 1721 VLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAY 1780
++ +L ++ L N+E+PL +LADME GI D+ + +N LQ+KL L + Y
Sbjct: 462 LMSDILSDHNQMDLLNNLELPLARILADMEETGIYTDVNDLKEMQNELQEKLDNLVSEIY 521
Query: 1781 TLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKE 1840
AG F++ + + VL+ LKLPI + K K ST L+ L+ +HPI+ I E
Sbjct: 522 EAAGESFNINSPKQLGIVLFETLKLPIIK---KTKTGYSTAVDVLEQLQGKHPIIDYILE 578
Query: 1841 HRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEF 1900
+R L+KL + + L ++ Q+ +H + QT TGRLS +PNLQ + +E
Sbjct: 579 YRQLSKLQSTY---VEGLQKVISDDQR--IHTRFNQTLAQTGRLSSIDPNLQNIPIRLE- 632
Query: 1901 KMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLL 1960
+ KI R F P+ +++++L+ADYSQIELR++AH ++D +L
Sbjct: 633 --------------EGRKI--RKAFKPTSDDYVILSADYSQIELRVLAHMTQDESLKEAF 676
Query: 1961 SKPHGD-VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAK 2019
HGD + A + G +D V R Q K + +GI+YG+ LS+ L + +AK
Sbjct: 677 --IHGDDIHAATAMKVFGVEKDQVNDLMRRQAKAVNFGIVYGISDYGLSQNLGITRKKAK 734
Query: 2020 EKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVN 2079
I + +SFPGV ++ V GYVE+L R+R++ I N +S A+R A+N
Sbjct: 735 AFIDDYLASFPGVKQYMTDIVKDAKANGYVETLLHRRRYIPDITSRNFNLRSFAERTAMN 794
Query: 2080 SICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDP 2139
+ QGSAADIIK+AM+ N + +LLLQVHDEL+ EV
Sbjct: 795 TPIQGSAADIIKLAMV---------------QFDKNVRETNYHAKLLLQVHDELIFEVPK 839
Query: 2140 SVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
S +++ V++ M++A L VPLLV G+TW
Sbjct: 840 SEVQDFSEFVEEIMDNALTLAVPLLVDSSYGATW 873
>gi|345864936|ref|ZP_08817131.1| DNA polymerase I [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345124016|gb|EGW53901.1| DNA polymerase I [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 899
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 265/530 (50%), Gaps = 52/530 (9%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAH 1705
D + S++L D +S +++ KK L + + +G+ K Q+ +A
Sbjct: 410 AFDTMLESYVL---DSTASRHDMDSLAKKYLHYDTIHFEDVAGKGKKQLTFDQIPLESAA 466
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQA 1764
T L LW L +E + +L ++E+PLV VL+ +E G+ +D
Sbjct: 467 PYAAEDADITLRLHQTLWPRLQAEPTLASLTTDLEVPLVPVLSRIERNGVRIDSVMLKAQ 526
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHC 1824
L + + LE++A+ LAG F++ + I ++ + L LP+ KG PST +
Sbjct: 527 SQELAQGMHQLEQQAHELAGHSFNMASPKQIGHIFFEELGLPVIAKTPKGA--PSTAESV 584
Query: 1825 L-DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGR 1883
L +L H + +I HR LAKL + + + + +H + Q ATGR
Sbjct: 585 LQELADQGHELPALILRHRGLAKLKSTYTDKLPEM----VDPDSGRVHTSYHQAVAATGR 640
Query: 1884 LSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIE 1943
LS +PNLQ + S E R F+P + W ++AADYSQIE
Sbjct: 641 LSSSDPNLQNIP-----VRSTE------------GRRIRQAFVP-EPGWKMVAADYSQIE 682
Query: 1944 LRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMG 2003
LR+MAH S D L+ ++ D+ AA G S D+V S++R K + +G++YGM
Sbjct: 683 LRIMAHLSGDAGLLQAFAE-GKDIHRATAAEVFGESLDAVTSEQRRSAKAINFGLIYGMS 741
Query: 2004 PNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIK 2063
L++QL +EA+E + + + +PGVA+++ ++GYVE+L GR+ +L IK
Sbjct: 742 AFGLAKQLGIERSEAQEYVDLYFARYPGVAAYMERTREQAREQGYVETLFGRRLYLPDIK 801
Query: 2064 FGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRC 2123
+ A+R A+N+ QG+AADIIK AM+ + D + A+ +
Sbjct: 802 -ARGPRRGAAERTAINAPMQGTAADIIKRAMLAV-----------DGWIEAD----RPPL 845
Query: 2124 RLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
RLL+QVHDELVLEV S ++ A ++ CMESAA L VPLLV++ +G W
Sbjct: 846 RLLMQVHDELVLEVQESFLETACQHLRDCMESAAELAVPLLVEVGIGDNW 895
>gi|403668450|ref|ZP_10933720.1| DNA polymerase I [Kurthia sp. JC8E]
Length = 874
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 155/437 (35%), Positives = 228/437 (52%), Gaps = 40/437 (9%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+PL +L +ME G+ V+ + ++ L KL +E+K Y LAG +F++ + +
Sbjct: 474 DIELPLAFILCEMESTGVSVNEQRLVEMGTELTSKLEAIEQKIYQLAGTEFNINSPKQLG 533
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
VL+ LKLPI + K K ST L+ L+ EH ++ I R L KL + + +
Sbjct: 534 VVLFEKLKLPIVK---KTKTGYSTAADVLEKLQPEHEVIDYILAFRQLGKLKSTYIDGLL 590
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
+ + + +H + Q TATGRLS +PNLQ + +E +
Sbjct: 591 KV----VHPDNHKIHTRYQQALTATGRLSSVDPNLQNIPVRLE---------------EG 631
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
KI R FIPSQ+ W L +ADYSQIELR++AH + + LI + D+ T A
Sbjct: 632 RKI--RQAFIPSQKGWKLFSADYSQIELRVLAHMANEKNLIDAF-RHDLDIHTKTAMDVF 688
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G ++SV R Q K + +GI+YG+ LS+ L + EA + I+ + SFPGV ++
Sbjct: 689 GVEKESVTPNMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAADFIERYFESFPGVKDYM 748
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V+ + GYV +L R+R+L + N +S A+R A+N+ QGSAADIIK+AMI
Sbjct: 749 TNIVAEAKKAGYVTTLLNRRRYLPDLNSRNFNVRSFAERTAMNTPIQGSAADIIKLAMIQ 808
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
++ A Q L R ++LLQVHDEL+ EV P + LV K MESA
Sbjct: 809 MNR-------------ALKEQGL--RSKMLLQVHDELIFEVPPEEVTTMQQLVPKVMESA 853
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L VPL +G TW
Sbjct: 854 LELSVPLKADAAIGDTW 870
>gi|300856524|ref|YP_003781508.1| DNA polymerase I [Clostridium ljungdahlii DSM 13528]
gi|300436639|gb|ADK16406.1| DNA polymerase I [Clostridium ljungdahlii DSM 13528]
Length = 876
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 231/441 (52%), Gaps = 41/441 (9%)
Query: 1733 EALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTA 1792
E L +E PL+ VLA ME G VD + ++ + ++ ++K+ Y+L+ +F++ +
Sbjct: 473 ELLYKVEQPLIYVLASMECEGFKVDKDKLVEQEGKFKIEIDKVQKEIYSLSEEEFNINSP 532
Query: 1793 ADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTL 1852
+ +L+ L LP+ + K K ST+ L+ L+ +HPIV I +R L KL + +
Sbjct: 533 KQLGKILFEKLDLPVIK---KTKTGYSTNAEVLEKLKDKHPIVEKIIYYRQLTKLYSTYI 589
Query: 1853 GSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNA 1912
+ ++ + + +H + QT T TGRLS EPNLQ + ++++M E
Sbjct: 590 EGLKAVIQ-----EDDKIHSSFNQTVTTTGRLSSTEPNLQNIP--IKYEMGKE------- 635
Query: 1913 EVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIA 1972
R F+P E+ ++L+ADYSQIELR++AH + D LI H D+ T A
Sbjct: 636 --------IRKIFVPENEDCVILSADYSQIELRVLAHIADDENLISAFIN-HSDIHTKTA 686
Query: 1973 ARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGV 2032
+ D V S +R K + +GI+YG+G +L++ L S EAK I ++ +P V
Sbjct: 687 SEVFKVPIDEVTSAQRSNAKAVNFGIVYGIGDFSLAKNLKISRKEAKLYIDTYFERYPKV 746
Query: 2033 ASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKI 2092
++ V YV +L R+RF+ +IK N +S +R A+N+ QGSAADIIKI
Sbjct: 747 KLYMDDIVKEAKVNSYVTTLMNRRRFIPEIKSSNKIVRSFGERLAMNTPIQGSAADIIKI 806
Query: 2093 AMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKC 2152
AM+N++ L N K + +L+LQVHDEL+L V I S+V++
Sbjct: 807 AMVNVY-----------RRLEEN----KLKSKLILQVHDELILNVYKEEIDNVKSVVKEE 851
Query: 2153 MESAALLLVPLLVKIQVGSTW 2173
ME L VPL V I VGS W
Sbjct: 852 MEKVLQLKVPLEVDISVGSNW 872
>gi|254515980|ref|ZP_05128040.1| DNA polymerase I superfamily protein [gamma proteobacterium NOR5-3]
gi|219675702|gb|EED32068.1| DNA polymerase I superfamily protein [gamma proteobacterium NOR5-3]
Length = 907
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 247/460 (53%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T AL LW KL + L L +IE+PLV VL+ ME G +D E + L ++L+
Sbjct: 484 TLALHETLWPKLQETPSLASVLTDIELPLVPVLSRMERCGALLDEERLWEHSRELGQRLQ 543
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE++A+ +AG F+L + + +L+ L+LP+ + KG PST + L L ++P
Sbjct: 544 ALEEEAHNVAGQVFNLGSPKQLGQILFEKLELPVLKKTPKGA--PSTAEEVLQELALDYP 601
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ ++ EHR L+KL + + + +++ +H + Q TATGRLS +PNLQ
Sbjct: 602 LPKLLIEHRGLSKLKSTYTDKLPGM----INSHTGRIHTSYHQAVTATGRLSSSDPNLQN 657
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E + +I R FI + E + ++AADYSQIELR+MAH S+D
Sbjct: 658 IPIRTE---------------EGRRI--RQAFI-AAEGYQIVAADYSQIELRIMAHLSED 699
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+ + + DV + AA G DSV ++R + K + +G++YGM L+ QL+
Sbjct: 700 PGLLAAF-RENLDVHSATAAEVFGVPLDSVSGEQRRKAKAINFGLIYGMSAFGLARQLHL 758
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA+ I + +PGV ++ + H++GYVE+L GR+ +L +I N + A
Sbjct: 759 DRGEAQRYIDVYFERYPGVRQYMVRTRALAHEQGYVETLFGRRLYLPEINVRNKMRQQAA 818
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK+AM+ + I D + A ++++QVHDEL
Sbjct: 819 ERTAINAPMQGTAADIIKMAMLAVDGWIA------DDGVDA---------KMIMQVHDEL 863
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VLEV S + + + M +AA L VPLLV+ G+ W
Sbjct: 864 VLEVAESQLDPVCDELCRLMSAAADLAVPLLVEAGRGANW 903
>gi|189460222|ref|ZP_03009007.1| hypothetical protein BACCOP_00859 [Bacteroides coprocola DSM 17136]
gi|189433083|gb|EDV02068.1| DNA-directed DNA polymerase [Bacteroides coprocola DSM 17136]
Length = 954
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 239/484 (49%), Gaps = 43/484 (8%)
Query: 1694 GRWKNQMR----RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADM 1749
G+ + MR + + C T L VL K L+ + E IE+PLV VLA M
Sbjct: 506 GKNQKNMRDLSPTSVYKYACEDADVTLKLKKVLEKELIENNVNELFQTIEMPLVPVLAYM 565
Query: 1750 ELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPE 1809
E G+ +D E + +++ LE++ + LAGM+F++ + + VL+ LK+
Sbjct: 566 ERNGVRIDTEALKETSQHFTARMKQLEEEVHQLAGMEFNIASPKQVGEVLFDRLKITDKA 625
Query: 1810 GHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT 1869
K Q+ T + L+ LR +H IV I EHR L KLL + ++ L ++ +
Sbjct: 626 KKTKTGQY-VTSEEVLESLRGKHEIVGKILEHRGLKKLLGTYIDALPLL----INPKTGH 680
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQ 1929
+H + QT TATGRLS PNLQ + + NED E+ R FIP
Sbjct: 681 IHTSFNQTVTATGRLSSSNPNLQNI------PIRNED----GKEI-------RRAFIPD- 722
Query: 1930 ENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERD 1989
E +ADYSQIELR+MAH S DP +I K D+ AA+ + V ++R
Sbjct: 723 EGCEFFSADYSQIELRIMAHLSGDPHMIEAFQKGQ-DIHAATAAKIYKEKLEDVTREQRS 781
Query: 1990 QTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYV 2049
+ K +GI+YG+ L+E+LN EAKE I + ++P V ++ ++ +KGY+
Sbjct: 782 KAKTANFGIIYGISVFGLAERLNIERKEAKELIDGYFENYPHVKEYMDQSIRLAQEKGYI 841
Query: 2050 ESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPD 2109
E++ RKR+L I N + A+R A+N+ QGSAADIIK+AMI I+
Sbjct: 842 ETIFKRKRYLPDINSRNAVVRGYAERNAINAPIQGSAADIIKVAMIRIYK---------- 891
Query: 2110 SSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQV 2169
F R +++LQVHDEL V P ++ +V ME+A + VPL
Sbjct: 892 -----RFMEEGIRSKMILQVHDELNFSVVPEEKEKVQHIVISEMEAAYKMKVPLQADCDW 946
Query: 2170 GSTW 2173
G W
Sbjct: 947 GKNW 950
>gi|88705360|ref|ZP_01103071.1| DNA polymerase I [Congregibacter litoralis KT71]
gi|88700450|gb|EAQ97558.1| DNA polymerase I [Congregibacter litoralis KT71]
Length = 909
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 244/460 (53%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T AL LW KL S L +IE+PLV VL+ ME G +D E + L +L+
Sbjct: 486 TLALHETLWPKLQESAGLASVFSDIELPLVPVLSRMERTGALLDEERLWEQSRELGGRLQ 545
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE++A+ LAG F+L + + +L+ L+LP+ + KG PST + L L ++P
Sbjct: 546 ALEEEAHNLAGQVFNLGSPKQLGQILFEKLELPVIKKTPKGA--PSTAEEVLQELALDYP 603
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ ++ EHR L+KL + + + ++ + +H + Q TATGRLS +PNLQ
Sbjct: 604 LPKLLIEHRGLSKLKSTYTDKLPGM----INPRTGRIHTSYHQAVTATGRLSSSDPNLQN 659
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E + +I R FI + E + ++AADYSQIELR+MAH SKD
Sbjct: 660 IPIRTE---------------EGRRI--RQAFI-AAEGYQVVAADYSQIELRIMAHLSKD 701
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
L+ + + DV + AA G S D+V ++R + K + +G++YGM L+ QL
Sbjct: 702 AGLLEAF-RENLDVHSATAAEVFGVSLDAVSGEQRRKAKAINFGLIYGMSAFGLARQLRL 760
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA+ I + +PGV ++ + H++GYVE+L GR+ +L +I N + A
Sbjct: 761 DRGEAQRYIDVYFERYPGVREYMDNTRALAHEQGYVETLFGRRLYLPEINVRNKNRQQAA 820
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AMI + I D S+ A ++++QVHDEL
Sbjct: 821 ERTAINAPMQGTAADIIKRAMITVDRWIA------DDSVDA---------KMIMQVHDEL 865
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VLEV + + K M +AA L VPLLV++ G+ W
Sbjct: 866 VLEVAEDQLDPVCDELCKQMSAAAELAVPLLVEVGRGANW 905
>gi|352107004|ref|ZP_08961725.1| DNA polymerase I [Halomonas sp. HAL1]
gi|350597455|gb|EHA13594.1| DNA polymerase I [Halomonas sp. HAL1]
Length = 929
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/467 (33%), Positives = 249/467 (53%), Gaps = 41/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSE-ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
C V T L L + +E L E L IE+PL+ VL+ +E G+ VD E +
Sbjct: 499 ACEDVDITLRLQQTLRPQVENEGRLAEVLDYIELPLIKVLSRIERNGVAVDAERLHEQSQ 558
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
L +++R LE++A+ LAG +F+L + + +L+ K+P+ + KG PST + L+
Sbjct: 559 QLDQRIRELEREAFELAGREFNLGSPKQLGEILFEEQKIPVLKKTPKGA--PSTAEGVLE 616
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L ++P+ VI +HR LAKL + + L ++ +T + +H + Q TATGRLS
Sbjct: 617 ELALDYPLPKVIMQHRGLAKLKSTYTDKLPRL--LNKATGR--VHTSYHQAVTATGRLSS 672
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + E + KI R FI ++ + ++AADYSQIELR+
Sbjct: 673 SDPNLQNIPIRTE---------------EGRKI--RQAFI-ARPGYRIVAADYSQIELRI 714
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
MAH S+D L+ ++ D+ T AA G S + V +R K + +G++YGM
Sbjct: 715 MAHLSEDKGLLEAFAEGR-DIHTATAAEVFGTSLEKVSGDQRRSAKAINFGLIYGMSAWG 773
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
L+ QL N+A+ I + +PGVA ++ S + G+VE++ GR+ +L +I+ N
Sbjct: 774 LARQLRIERNQAQTYIDRYFDRYPGVARYMERIRSQAAEDGFVETVLGRRLYLPEIQSQN 833
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
+ A+R A+N+ QG+AADIIK AMI++ + + G F L ++
Sbjct: 834 RNRRQGAERTAINAPMQGTAADIIKQAMIDVDAWLEEG----------EFDAL-----MV 878
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+QVHDELV EV ++ + VQ M+ AA L VPL+V+ + G+ W
Sbjct: 879 MQVHDELVFEVAEKQVEAFIKQVQTRMQGAAALKVPLIVEAESGANW 925
>gi|451345941|ref|YP_007444572.1| DNA polymerase I [Bacillus amyloliquefaciens IT-45]
gi|449849699|gb|AGF26691.1| DNA polymerase I [Bacillus amyloliquefaciens IT-45]
Length = 879
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++I+ P + ++ KE + S+ A + + + + R+
Sbjct: 395 FDALLAAYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADHLARKA 454
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
+ +L L L +E ++E+PL +L +ME G+ VD+E + L+ KL
Sbjct: 455 SAVNSLRDKLLDALEENNQLELYEDLELPLALILGEMESMGVKVDVERLKRMGEELKAKL 514
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ E+K + +AG F++ + + +L+ L LP K K ST L+ L +H
Sbjct: 515 KEYEEKIHDIAGEPFNINSPKQLGVILFEKLGLP---PVKKTKTGYSTSADVLEKLADKH 571
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I ++R + KL + + + + R + +H + Q T TGRLS +PNLQ
Sbjct: 572 DIVAYILQYRQIGKLQSTYIEGLLKVTR----KGSHKVHTRFNQALTQTGRLSSTDPNLQ 627
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ AADYSQIELR++AH SK
Sbjct: 628 NIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHISK 670
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A SED V R Q K + +GI+YG+ LS+ L
Sbjct: 671 DENLIEAFTNDM-DIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGISDYGLSQNLG 729
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + SFPGV +++ +V QKGYV +L R+R++ ++ N +S
Sbjct: 730 ITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSF 789
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +AA + + RLLLQVHDE
Sbjct: 790 AERTAMNTPIQGSAADIIKKAMID---------------MAAELKEKNLKARLLLQVHDE 834
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ E I+ LV + ME A L VPL G +W
Sbjct: 835 LIFEAPKEEIEILEKLVPEVMEHALALDVPLKADYASGPSW 875
>gi|300508400|pdb|3HT3|A Chain A, Crystal Structure Of Fragment Dna Polymerase I From Bacillus
Stearothermophilus V713p Mutant Bound To G:dctp
gi|300508401|pdb|3HT3|D Chain D, Crystal Structure Of Fragment Dna Polymerase I From Bacillus
Stearothermophilus V713p Mutant Bound To G:dctp
Length = 579
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 230/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 177 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 236
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 237 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 293
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R +T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 294 LLKVVR--PATKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 334
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 335 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 391
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + +GI YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 392 IFQVSEDEVTPNMRRQAKAVNFGIPYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 451
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 452 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 511
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 512 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 556
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 557 QAVTLRVPLKVDYHYGSTW 575
>gi|334133628|ref|ZP_08507173.1| DNA-directed DNA polymerase [Paenibacillus sp. HGF7]
gi|333608841|gb|EGL20128.1| DNA-directed DNA polymerase [Paenibacillus sp. HGF7]
Length = 746
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 259/522 (49%), Gaps = 40/522 (7%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D+ + +++L P + + + + + A + +++ A R+
Sbjct: 261 AFDVMLAAYLLDPTESSLTLSGIADKYGALHVAPDEAVFGKGAKFRLPETEAVAEHLVRK 320
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
+ L L + L ++ + +E+PL VLADMEL GI VD G Q + L +
Sbjct: 321 ADRISRLDVSLREKLEQADMKQLYYELELPLSGVLADMELRGIKVDTAGLRQLGDELAVQ 380
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
+ + Y AGM+F++ + + VL+ L+LP+ K K STD L+ L
Sbjct: 381 IERTMTEIYRHAGMEFNINSPKQLGEVLFEKLQLPV---QKKTKTGYSTDAEVLEKLAPY 437
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H IV I +R LAKL + + + L + T K +H ++ QT ATGRLS + PNL
Sbjct: 438 HEIVQGILHYRQLAKLQSTYVEGL--LKEVRKETGK--VHTYYRQTIAATGRLSSQYPNL 493
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS+ W +LAADYSQIELR++AH S
Sbjct: 494 QNIPIRLE---------------EGRKI--RKVFVPSEPGWSILAADYSQIELRVLAHIS 536
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L + + D+ T A G +E V + R K + +GI+YG+ LS+ L
Sbjct: 537 GDENLKEAFTN-NMDIHTKTAMDVFGVAESEVDANMRRSAKAVNFGIVYGISDYGLSQNL 595
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
S EA + I+ + + F GV ++ V ++GYV +L R+R+L +I N +S
Sbjct: 596 AISRKEASQFIEQYFAVFQGVRQYMDDIVKLAREQGYVTTLLQRRRYLPEITASNFNLRS 655
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK+AM+ + D L A + LK R+LLQVHD
Sbjct: 656 FAERTAMNTPIQGTAADIIKLAMVQM-----------DERLKA--EGLK--SRMLLQVHD 700
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EL+ EV P ++ +V + ME A L VPLL ++ GS W
Sbjct: 701 ELIFEVPPDELETMRRIVPEVMEGALALDVPLLAEVDYGSNW 742
>gi|390136443|pdb|4DQQ|A Chain A, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment
E658a, Dna Duplex, And Rctp (Paired With Dg Of Template)
In Presence Of Mg2+
gi|390136444|pdb|4DQQ|D Chain D, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment
E658a, Dna Duplex, And Rctp (Paired With Dg Of Template)
In Presence Of Mg2+
gi|390136449|pdb|4DQR|A Chain A, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment
E658a, Dna Duplex, And Rctp (Paired With Dg Of Template)
In Presence Of Mn2+
gi|390136450|pdb|4DQR|D Chain D, Ternary Complex Of Bacillus Dna Polymerase I Large Fragment
E658a, Dna Duplex, And Rctp (Paired With Dg Of Template)
In Presence Of Mn2+
gi|390136520|pdb|4E0D|A Chain A, Binary Complex Of Bacillus Dna Polymerase I Large Fragment
E658a And Duplex Dna
Length = 592
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/439 (35%), Positives = 230/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 190 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 249
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 250 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 306
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R +T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 307 LLKVVR--PATKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 347
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQI LR++AH ++D L+ + D+ T A
Sbjct: 348 EGRKI--RQAFVPSESDWLIFAADYSQIALRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 404
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + +GI+YG+ L++ LN S EA E I+ + SFPGV
Sbjct: 405 IFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 464
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 465 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 524
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 525 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 569
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 570 QAVTLRVPLKVDYHYGSTW 588
>gi|319953575|ref|YP_004164842.1| DNA polymerase i [Cellulophaga algicola DSM 14237]
gi|319422235|gb|ADV49344.1| DNA polymerase I [Cellulophaga algicola DSM 14237]
Length = 945
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 192/664 (28%), Positives = 299/664 (45%), Gaps = 105/664 (15%)
Query: 1517 YDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPE 1576
+D + + + E+ G+A WE S +Y+ P D E
Sbjct: 376 FDTETTGLNPLTAELVGIAFSWEASKGFYIPFPAD----------------------KTE 413
Query: 1577 HQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLEN 1636
Q E+I+Q + E + K N+K I+VL V ++
Sbjct: 414 AQ-EIIEQ----LRPFFEDEAIEKIGQNLKYDIKVLDKYNVKVK---------------- 452
Query: 1637 VGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGR- 1695
G F D + +++ PD N+E + L+ + G+
Sbjct: 453 -GKCF------------DTMLAHYLINPD----MRHNMEVLAETYLNYTPVSITELIGKK 495
Query: 1696 WKNQ--MRRAAHNGCCRRVAQ----TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADM 1749
KNQ MR A+ T L L + E +IEIPL++VLADM
Sbjct: 496 GKNQLNMRDVPLPNQTEYAAEDADITYQLAQQFKPELEEAKTQELFTDIEIPLLHVLADM 555
Query: 1750 ELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPE 1809
EL GI +D + L ++ LE Y AG +F++ + + ++L+ L L
Sbjct: 556 ELEGINLDTKFLNSLAEDLDNDIKKLEADIYEEAGEEFNIASPKQLGDILFDKLALVKKP 615
Query: 1810 GHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT 1869
K Q+ ST + L L +H I+ + +R LAKL + + ++ A++ ST +
Sbjct: 616 KKTKTGQY-STAEDVLSYLAKDHKIIENVLSYRGLAKLKSTYVDALP--AQVEESTGR-- 670
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQ 1929
+H ++QT ATGRLS PNLQ + E R F+P
Sbjct: 671 VHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQ-----------------VRKAFVPRN 713
Query: 1930 ENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERD 1989
+ ++L+AADYSQIELR++A S++ +I K D+ A++ + V ++R
Sbjct: 714 KEYVLVAADYSQIELRIIAALSEETTMIEAF-KNGEDIHASTASKVFNVPLEEVTREQRS 772
Query: 1990 QTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYV 2049
K + +GI+YG+ LS Q + S EAKE I ++ ++P + S++ V GYV
Sbjct: 773 NAKTVNFGIIYGVSAFGLSNQTDLSRAEAKELIDTYYKTYPKLKSYMGGLVDFARDNGYV 832
Query: 2050 ESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPD 2109
+++ GR+R+L I N + A+R AVN+ QGSAADIIKIAMINIH + G YK
Sbjct: 833 QTVLGRRRYLKDINGSNAIVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLEEGKYK-- 890
Query: 2110 SSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQV 2169
++LLQVHDELV +V ++E +L++ ME+A L VPL V++ V
Sbjct: 891 -------------TKMLLQVHDELVFDVYKPELEEMKTLIKSEMENAYKLEVPLDVEVGV 937
Query: 2170 GSTW 2173
G W
Sbjct: 938 GENW 941
>gi|295696996|ref|YP_003590234.1| DNA polymerase I [Kyrpidia tusciae DSM 2912]
gi|295412598|gb|ADG07090.1| DNA polymerase I [Kyrpidia tusciae DSM 2912]
Length = 890
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 245/528 (46%), Gaps = 57/528 (10%)
Query: 1651 DGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D D+ + ++++ P D +P+L + ++ L R + +R
Sbjct: 411 DAFDVLLAAYLINPQD---GHPDLTEVFERYLGVSVPPLEGRGSPQGEERQRWWALYAAA 467
Query: 1711 RVAQTRAL-----CSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
AL LW L N+E+PL VLA ME G+ VD
Sbjct: 468 LAGVYPALKRDLEIRGLWPLY---------HNLELPLSFVLAKMERTGVRVDATRLRSLG 518
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
++ LE++ Y LAG F+L + +A +L+ L LP K K ST L
Sbjct: 519 ETFSTEIARLEEEIYKLAGTTFNLNSPKQLAEILFDKLGLP---PQKKTKTGYSTGADVL 575
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L H IV I + R L KL + + + + R + +H + Q TATGRLS
Sbjct: 576 EKLAPYHEIVQRILDWRQLIKLQSTYIEGLLKVIR----PETGKIHTCFQQAVTATGRLS 631
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + VE R FIPS+ W +++ADYSQIELR
Sbjct: 632 STDPNLQNIPVRVEEGR-----------------RLRQAFIPSESGWKIVSADYSQIELR 674
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
++AHFSKDPAL+ + D+ AA ++ V R Q K + +GI+YG+
Sbjct: 675 VLAHFSKDPALVQAF-RDDLDIHARTAAEVFEVPQEQVTPGMRRQAKAVNFGIVYGISDY 733
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L EA E I + + FP V S++ V++ + G+V +L GR+R+L I
Sbjct: 734 GLSQNLGIPRKEAAEFIARYFAKFPRVKSYMEETVAAARKNGFVTTLLGRRRYLPDIHSS 793
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADIIK AM+ + + G + R ++
Sbjct: 794 NYNLRSFAERTAMNTPIQGSAADIIKRAMVEVDRRLTEGDF---------------RAKM 838
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV P + +V++ MESA L VPL V I G W
Sbjct: 839 LLQVHDELVFEVPPEEVGALQDMVKQAMESAVSLDVPLKVDIHAGDNW 886
>gi|406987273|gb|EKE07671.1| hypothetical protein ACD_18C00014G0003 [uncultured bacterium]
Length = 905
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 242/462 (52%), Gaps = 41/462 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
+ ++ + LV E+ + +IEIPL++VLA+MEL G+ +D + + K L LEK
Sbjct: 483 IYTIYKERLVEEKYEDLYFDIEIPLLSVLAEMELNGVAIDADILQDLSVQVNKTLGKLEK 542
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ + AG +F++ ++ + ++L+ + L +G KGK ST L+ LR HPI+
Sbjct: 543 QIWKEAGEEFNVASSVQLRDILFDKMGLS-TQGIKKGKTGYSTAAAELEKLRDLHPIIAY 601
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYT--LHGHWLQTSTATGRLSMEEPNLQCVE 1895
I++ R L KL N + + +L KYT +H + QT ATGRLS +PNLQ +
Sbjct: 602 IEDFRELEKLRNTYIDVLPNL------RNKYTSRIHTTYNQTVAATGRLSSSDPNLQNIP 655
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
E R+ FI + N L+AADYSQIELR++A +KD
Sbjct: 656 IRTELGKK-----------------VREVFIAEKGNA-LIAADYSQIELRVVASLAKDER 697
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
+I + K D+ T AA G V + R K + +G+LYGMG L+ + S
Sbjct: 698 MIEIF-KNKQDIHTATAAAINGVELKEVTKEMRRAAKEVNFGVLYGMGAFGLASRTGISR 756
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
+A+E I + ++F GV ++ + + G+VE++ GR+R++ ++ N + +S +R
Sbjct: 757 YDAQEFIDKYFANFSGVKKYMENILKQAEEDGFVETIFGRRRYIPELHSNNFQLRSSGER 816
Query: 2076 QAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVL 2135
AVN QG+AADI+K+AMI + + I N K + +L LQVHDELVL
Sbjct: 817 MAVNMPVQGTAADIMKLAMIAVSNKI-------------NVDKYKDKVKLCLQVHDELVL 863
Query: 2136 EVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
EV + E +V+ ME+ L VPL V++ +G WG L+
Sbjct: 864 EVSEDLKDEIAEIVKYEMENVVKLEVPLDVEVAIGYCWGRLK 905
>gi|304309855|ref|YP_003809453.1| DNA polymerase A [gamma proteobacterium HdN1]
gi|301795588|emb|CBL43787.1| DNA polymerase A [gamma proteobacterium HdN1]
Length = 920
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 238/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L LW ++ + L + IE+PLV VL+ ME G +D+ Q L +++
Sbjct: 497 TLKLHQALWPRVQKTPTLTKVFQEIEMPLVGVLSRMEREGARIDVAALKQQSRQLGERMA 556
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE +A+TLAG F+L + + +LY L+LPI + KG PSTD+ L L H++
Sbjct: 557 ELEAEAHTLAGQPFNLASPKQLGEILYDQLQLPILKKTPKGA--PSTDESVLQDLAHDYE 614
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ V+ E+R AKL + + L ++ + +H + Q +TGRLS +PNLQ
Sbjct: 615 LPKVLLEYRGCAKLKSTYTDKLPEL----VNPRTGRIHTSYHQAVASTGRLSSSDPNLQN 670
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ + NE R FI ++ + ++AADYSQIELR+MAH S D
Sbjct: 671 I------PIRNE-----------SGRKIRQAFI-AEPGFTMVAADYSQIELRIMAHLSDD 712
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
+LI ++ D+ AA G + V S R K + +G++YGM L+ QL
Sbjct: 713 ESLIDAFAR-GLDIHRATAAEVMGVPLEDVTSDMRRSAKAVNFGLIYGMSAFGLARQLGI 771
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
S +A+ + + +PGV ++ H +GYVE+L GR+ +L +++ + + A
Sbjct: 772 SREQAQAYMDRYFHRYPGVLRYMEDIRKQAHDQGYVETLFGRRLYLPEVRAASKMRRQAA 831
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QGSAADIIK AMI+I + + + + R+++QVHDEL
Sbjct: 832 ERVAINAPMQGSAADIIKRAMIDIDTWL---------------RTQPAKIRMIMQVHDEL 876
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V EV V+ +A+ +QK M AA L VPL+V+ G+ W
Sbjct: 877 VFEVPNDVVPDAIEQIQKRMSGAASLKVPLIVEAGTGTNW 916
>gi|149177359|ref|ZP_01855964.1| DNA polymerase I [Planctomyces maris DSM 8797]
gi|148843884|gb|EDL58242.1| DNA polymerase I [Planctomyces maris DSM 8797]
Length = 900
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 195/695 (28%), Positives = 313/695 (45%), Gaps = 105/695 (15%)
Query: 1492 INASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKD 1551
I+ F+ FL + EF D+ A + EI G A+ WE +Y+
Sbjct: 301 IDTKPAFETFLALLKEQDEFCVDLETTGLKPAEA----EIVGWAISWEKHRGFYIP---- 352
Query: 1552 LWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQV 1611
+ G S + L P++ LE +K I+E ++ N+K + V
Sbjct: 353 ------------VEGPSGQLALDPQYVLEHLK-------PILEDPEILITNQNIKYDMVV 393
Query: 1612 LKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSN 1671
L V +Q G S ID + S+++ + S
Sbjct: 394 LMRVGVFLQ--------GVS---------------------IDPMVASYLISAGERGHS- 423
Query: 1672 PNLEKEVKKRLSSEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSE 1729
L+K ++ L+ + SG+ + +M + + + L ++L E
Sbjct: 424 --LDKLSERYLNHTMIPISELIGSGKQQKKMFEVDVDKVAEYAVEDAEIAWQLSRILQDE 481
Query: 1730 ----ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
L E +E PL+++LA+ME GI VD Q LL+K+L L + + +AG
Sbjct: 482 LKHAGLWELYWELERPLISILAEMEFTGIKVDTAELKQQSQLLEKRLTTLISEIHEIAGH 541
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLA 1845
+F++ + + VL+ L LP+ K K PSTD+ L+ L H + I EHR L+
Sbjct: 542 EFNIASPLQLRTVLFEELNLPV---FKKTKTGPSTDQSVLEKLAPLHALPARITEHRHLS 598
Query: 1846 KLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNE 1905
KL + L ++ L ++ + +H + Q ATGRLS +PNLQ + V + +
Sbjct: 599 KLKSTYLDALPGL----VNPETGRIHASFNQVVAATGRLSSSDPNLQNIP--VRTQEGRQ 652
Query: 1906 DIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG 1965
R FIP ENW LL ADYSQIELR++AH S+D AL +
Sbjct: 653 ---------------IRKAFIPQDENWRLLCADYSQIELRILAHLSQDVALSQAF-REGA 696
Query: 1966 DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSF 2025
D+ T +A+ D V S R K + +G++YG P LSE + +EA I+ +
Sbjct: 697 DIHTAVASDIFRVPHDQVDSDMRRTAKAVNFGVIYGQSPFGLSEAIGIPQSEAAGFIEDY 756
Query: 2026 KSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGS 2085
+ GV +L + C ++ +VE++ GRKR + ++ G K+ + +R A+N++ QGS
Sbjct: 757 FVRYQGVREFLDQILEDCAKQKFVETICGRKREIQGVRGGVQKQLNMPERTAINTVIQGS 816
Query: 2086 AADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEA 2145
AAD+IK AM+N+ I + + R+L+Q+HDELV EV + +
Sbjct: 817 AADLIKQAMLNVSDRI---------------KQEQHPGRMLMQIHDELVFEVPLTALDTL 861
Query: 2146 VSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
+V++ MESA L VPL+V + G W P +
Sbjct: 862 GLIVREEMESAMDLEVPLIVDMSSGLNWLEQNPLE 896
>gi|222099813|ref|YP_002534381.1| DNA-directed DNA polymerase I [Thermotoga neapolitana DSM 4359]
gi|221572203|gb|ACM23015.1| DNA-directed DNA polymerase I [Thermotoga neapolitana DSM 4359]
Length = 893
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 240/470 (51%), Gaps = 38/470 (8%)
Query: 1704 AHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQ 1763
A N C T L +L L EL IE+PLVNVLA MEL G+ VD E +
Sbjct: 461 AANYSCEDADITYRLYKILSMKLHEAELENVFYRIEMPLVNVLARMELNGVYVDTEFLKK 520
Query: 1764 ARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKH 1823
KKL L +K Y +AG F++ + ++ +L+ L + P G ST
Sbjct: 521 LSEEYGKKLEELAEKIYQIAGEPFNINSPKQVSKILFEKLGIK-PRGKTTKTGEYSTRIE 579
Query: 1824 CLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGR 1883
L+ + +EH IVP+I E+R + KL + + ++ L ++ + +H + QT TATGR
Sbjct: 580 VLEEIANEHEIVPLILEYRKIQKLKSTYIDTLPKL----VNPKTGRIHASFHQTGTATGR 635
Query: 1884 LSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIE 1943
LS +PNLQ + E ++I R +P +W +++ADYSQIE
Sbjct: 636 LSSSDPNLQNLPTKSE---EGKEI--------------RKAIVPQDPDWWIVSADYSQIE 678
Query: 1944 LRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMG 2003
LR++AH S D L+ + DV T+ A+R + V + R K + + I+YG+
Sbjct: 679 LRILAHLSGDENLVKAFEE-GIDVHTLTASRIYNVKPEEVNEEMRRVGKMVNFSIIYGVT 737
Query: 2004 PNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIK 2063
P LS +L EA++ I S+ + +P V S++ V+ +KGYV +L GRKR + ++
Sbjct: 738 PYGLSVRLGIPVKEAEKMIISYFTLYPKVRSYIQQVVAEAKEKGYVRTLFGRKRDIPQLM 797
Query: 2064 FGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRC 2123
+ +S+ +R A+N+ QG+AADIIK+AMI+I D L +
Sbjct: 798 ARDKNTQSEGERIAINTPIQGTAADIIKLAMIDI-----------DEELRKR----NMKS 842
Query: 2124 RLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
R+++QVHDELV EV +E V LV+ M + L VPL V I +G +W
Sbjct: 843 RMIIQVHDELVFEVPDEEKEELVDLVKNKMTNVVKLSVPLEVDISIGKSW 892
>gi|329117680|ref|ZP_08246397.1| DNA-directed DNA polymerase [Streptococcus parauberis NCFD 2020]
gi|326908085|gb|EGE54999.1| DNA-directed DNA polymerase [Streptococcus parauberis NCFD 2020]
gi|456369761|gb|EMF48661.1| DNA polymerase I [Streptococcus parauberis KRS-02109]
Length = 879
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 238/454 (52%), Gaps = 41/454 (9%)
Query: 1721 VLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAY 1780
+L KL V++E + +IE+PL NVLA ME+ GI V+ + + + L ++ Y
Sbjct: 462 ILDKLAVNKEE-DLYFDIELPLANVLAKMEIAGITVNKTALQEMAEQNKAVIESLTEEIY 520
Query: 1781 TLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKE 1840
+AG +F++ + + ++L+ ++LP+ E K K ST L+ L PIV I +
Sbjct: 521 EMAGEEFNINSPKQLGSILFEKMQLPL-EMTKKTKTGYSTAVDVLERLAPIAPIVAKILD 579
Query: 1841 HRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEF 1900
+R ++KL + + L MS K +H ++Q T TGRLS +PNLQ +
Sbjct: 580 YRQISKLQST---YVIGLQDYIMSDGK--IHTRYIQDLTQTGRLSSSDPNLQNIP----- 629
Query: 1901 KMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLL 1960
++ ++ R F+PS E+ +LL++DYSQIELR++AH S D LI
Sbjct: 630 -----------VRLEQGRL-IRKAFLPSSEDAVLLSSDYSQIELRVLAHISGDEHLIAAF 677
Query: 1961 SKPHGDVFTMIAARWTG-RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAK 2019
K + D+ T A R G E+ V +R K + +GI+YG+ LS L + +AK
Sbjct: 678 -KENADIHTSTAMRVFGIEKEEDVTPNDRRNAKAVNFGIVYGISDFGLSNNLGITRKKAK 736
Query: 2020 EKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVN 2079
+ I+++ +PG+ ++ V GYVE+L R+R L I N +S A+R A+N
Sbjct: 737 DYIETYFERYPGIKEYMETVVRDARDTGYVETLFNRRRELPDINSRNFNIRSFAERTAIN 796
Query: 2080 SICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDP 2139
S QGSAADI+KIAMIN+ + G +K ++LLQVHDE+VLEV
Sbjct: 797 SPIQGSAADILKIAMINLDKALSEGQFK---------------AKMLLQVHDEIVLEVPN 841
Query: 2140 SVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++ +LV+K ME A L VPLL G TW
Sbjct: 842 DELEAIKALVKKTMEGAVDLAVPLLADENTGKTW 875
>gi|134299456|ref|YP_001112952.1| DNA polymerase I [Desulfotomaculum reducens MI-1]
gi|134052156|gb|ABO50127.1| DNA polymerase I [Desulfotomaculum reducens MI-1]
Length = 883
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 238/477 (49%), Gaps = 46/477 (9%)
Query: 1706 NGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
R R L L++ L + L +E+PLV +L++ME+ G+ VD +G
Sbjct: 450 TAMASRAEAIRRLAQKLFEKLAERQEDRLLTQVELPLVRILSEMEIAGVAVDKQGLQDMS 509
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
LQ L K + LAG F++ + + +L+ LKLP+ + K K STD L
Sbjct: 510 VELQTVTETLTTKIHELAGENFNINSPKQLGPILFEKLKLPVLK---KTKTGYSTDAEVL 566
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L EH IV +I E+R +AKL + + +L + Q LH + QT TATGRLS
Sbjct: 567 EKLAEEHEIVALILEYRQMAKLKSTYTDGLAAL----VDPQTGRLHSTFHQTVTATGRLS 622
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
EPNLQ + +E R FIP Q ++L ADYSQIELR
Sbjct: 623 SAEPNLQNIPIRLE-----------------TGRKIRKVFIPRQRGNLILTADYSQIELR 665
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
++AH S+D + + + D+ T A+ G D V S+ R + K + +GI+YG+
Sbjct: 666 VLAHMSQDESFLDAFRQGQ-DIHTRTASEVFGVPMDQVTSEMRSRAKAVNFGIVYGISDF 724
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
L+ L S EA+ I + + PGV ++ + + GYV +L R+R+L ++
Sbjct: 725 GLARDLKVSRKEAQGYIDHYFARCPGVRQYIDRVIKEAKETGYVNTLLNRRRYLPELFSK 784
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR--- 2122
N ++ +R A+N+ QG+AADIIK+AM+ I Q LK +
Sbjct: 785 NFNIRNFGERAAMNTPIQGTAADIIKLAMVKIS------------------QQLKEQNLS 826
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPF 2179
+++LQVHDEL+ + + I+ + LV++ ME+A L VPL+V I++G W +P
Sbjct: 827 SQMVLQVHDELIFDAPENEIESLIMLVRQSMENALQLDVPLVVDIKLGPNWYEAKPI 883
>gi|423135955|ref|ZP_17123600.1| DNA polymerase I [Myroides odoratimimus CIP 101113]
gi|371639690|gb|EHO05305.1| DNA polymerase I [Myroides odoratimimus CIP 101113]
Length = 939
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 174/603 (28%), Positives = 279/603 (46%), Gaps = 72/603 (11%)
Query: 1575 PEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGL 1634
PE+Q E K ++ E ++ K N+K I++LK ++++
Sbjct: 401 PENQDEA-KALAQQFAPFFEAENIEKIGQNLKYDIKILKQYDITVE-------------- 445
Query: 1635 ENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSG 1694
G F D I +++ PD R + L + K + G
Sbjct: 446 ---GPLF------------DTMIAHYLINPD-MRHNMDVLAETYLKYTPQPIEELIGKKG 489
Query: 1695 RWKNQMRRAAHNGCCRRVAQ----TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADME 1750
+ + MR + T L LV+ E NIEIPLVNVLADME
Sbjct: 490 KNQKTMRDIEAEIVKEYAGEDADITYQLKETFAPQLVATHTQELFDNIEIPLVNVLADME 549
Query: 1751 LWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG 1810
GI +D E + L ++ LE++ + AG +F+L + + ++L+ L++ +
Sbjct: 550 TEGIRLDTEYLKSLSDTLSTDIKLLEQRIFLEAGEEFNLASPKQLGDILFEKLQIGGSKP 609
Query: 1811 HNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL 1870
+T + L L +H IV I E R L KL N + ++ ++++ T + +
Sbjct: 610 KKTKTGQYATGEEILSDLAPKHEIVRDILEWRQLVKLQNTYVDALPD--QVNIKTNR--V 665
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQE 1930
H ++Q ATGRLS PNLQ + E R F+ E
Sbjct: 666 HTEYMQAVAATGRLSSNNPNLQNIPIRTERGRQ-----------------VRKAFVARDE 708
Query: 1931 NWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQ 1990
N++LLAADYSQIELR++A S++P ++ + D+ AA+ + V ++R
Sbjct: 709 NYVLLAADYSQIELRIIAALSQEPNMLESFQRGE-DIHRSTAAKVFNVPLEEVTKEQRSH 767
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +GI+YG+ LS Q N S E+KE I ++ +++P + S++ + + GYV+
Sbjct: 768 AKTVNFGIIYGVSAFGLSNQTNLSRAESKELIDAYYATYPKLKSYIATQIDFAREHGYVQ 827
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
++ GR+R+L I N K A+R AVN+ QGSAADIIKIAMINI+ + +K
Sbjct: 828 TILGRRRYLKDIHSHNAVVKGAAERNAVNAPIQGSAADIIKIAMININKKLTAENWK--- 884
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
++LLQVHDELV + ++ ++V+ ME+A L VPL+V + G
Sbjct: 885 ------------SKMLLQVHDELVFDAHKEELESLKTMVKSEMENAYKLDVPLIVDLGTG 932
Query: 2171 STW 2173
W
Sbjct: 933 ENW 935
>gi|386811906|ref|ZP_10099131.1| DNA polymerase I [planctomycete KSU-1]
gi|386404176|dbj|GAB62012.1| DNA polymerase I [planctomycete KSU-1]
Length = 888
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 194/692 (28%), Positives = 311/692 (44%), Gaps = 105/692 (15%)
Query: 1492 INASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKD 1551
IN FD F D+ F D+ + + ++ G++ W+ YY+
Sbjct: 296 INTPERFDEFFDQLTKQRIFAVDLETTNINPLKAHIV----GISFSWQPKEAYYIPF--- 348
Query: 1552 LWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQV 1611
G L P L +I I+E +++K N+K + V
Sbjct: 349 -------------MGPEGTECLNPGTVL-------PKIRTILEDENIKKAGQNIKYDLLV 388
Query: 1612 LKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSN 1671
LK+ + ++ G F D I S++L P N
Sbjct: 389 LKNNTILLR-----------------GIVF------------DSMIASYLLNP---IKRN 416
Query: 1672 PNLEKEVKKRLSSEAAAAANRSGRWKNQ--MRRAAHNGCCRRVAQ----TRALCSVLWKL 1725
NL+ + LS + + + G K Q M + N C+ Q T L +++ L
Sbjct: 417 HNLDDIALEYLSYKTISISELIGLGKEQITMDQVDINKVCQYACQDADITFRLANLMEPL 476
Query: 1726 LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
L + L +EIPL+ LA ME GI VD + L +L+ EK+ YT A
Sbjct: 477 LKKQGLWHLFQMVEIPLIYALAKMEWNGICVDATILQKMSGSLTTRLQQFEKEIYTSANH 536
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLA 1845
+F++ + ++ VL+ L+LP + K STD + L L HP+ ++ E+R L
Sbjct: 537 EFNIGSPKQLSEVLFEKLELP---QLRRTKTGLSTDANVLTTLAWHHPLPKLVLEYRQLI 593
Query: 1846 KLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNE 1905
KL N + ++ ++ I+ +T + +H + QT TATGRLS EPNLQ + +
Sbjct: 594 KLKNTYVDALPNM--INENTGR--VHTTFNQTVTATGRLSSSEPNLQNIPIRTDIGRQ-- 647
Query: 1906 DIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG 1965
R FIP +++ + L+ADYSQIELR++AHFS D AL+ +
Sbjct: 648 ---------------IRSAFIPCEKDSVFLSADYSQIELRILAHFSDDTALVTAFQQ-DK 691
Query: 1966 DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSF 2025
D+ +A+ G + V S+ R K + +GI+YG+ LS S +A I ++
Sbjct: 692 DIHVSVASTIYGIPIEQVTSEMRRNAKAINFGIIYGLNEYGLSRDTGLSLKDAHNFINAY 751
Query: 2026 KSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGS 2085
+ + GV + + GYV++L RKR + + N K ++ A+R AVN+I QGS
Sbjct: 752 FNLYHGVKRFKDTVLEKARSCGYVKTLFNRKRSIPDLNSENKKRRNLAERIAVNTIIQGS 811
Query: 2086 AADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEA 2145
AAD+IK+AM IH+ ++ G Y+ ++LLQ+HDEL+ EV + +
Sbjct: 812 AADLIKVAMNKIHAKLISGGYE---------------AKMLLQIHDELLFEVKENALTLT 856
Query: 2146 VSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
S++Q+ M +A L VP+ V I+ G W E
Sbjct: 857 RSMIQEEMSNAVTLNVPIKVNIKTGKNWMEAE 888
>gi|423346550|ref|ZP_17324238.1| DNA polymerase I [Parabacteroides merdae CL03T12C32]
gi|409219701|gb|EKN12661.1| DNA polymerase I [Parabacteroides merdae CL03T12C32]
Length = 940
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 235/449 (52%), Gaps = 41/449 (9%)
Query: 1727 VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
+ +E +E+L +IE+PL+ VLA+ME G+ +D Q+ L L+ LEK+ Y LAGM
Sbjct: 527 LEKEGLESLFYDIEMPLIYVLAEMEYTGVTLDTVALKQSSEELTTALKKLEKEIYELAGM 586
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHP-STDKHCLDLLRHEHPIVPVIKEHRTL 1844
KF++ +A + VL+ HLK I E K K ST + L+ +R +HP+V + E+R L
Sbjct: 587 KFNINSARQVGEVLFDHLK--IEEKARKTKTGSYSTSEEILEKMRSKHPVVGKLLEYRGL 644
Query: 1845 AKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN 1904
KLL+ + ++ L I+ T K +H + Q T+TGRLS PNLQ +
Sbjct: 645 KKLLSTYIDALPEL--INPETGK--IHTSYNQAVTSTGRLSSTNPNLQNIPVR------- 693
Query: 1905 EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
D R F E+ I +ADYSQIELR+MAH S+D +I +
Sbjct: 694 ----------DELGREIRKAFTAENEDCIFFSADYSQIELRIMAHLSQDAHMIEAF-RSG 742
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
D+ AA+ G + V S R + K +GI+YG+ L+E+L+ E+KE I+
Sbjct: 743 ADIHAATAAKIYGIPVEEVTSDMRRKAKTANFGIIYGISVFGLAERLSIPRAESKELIEG 802
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
+ ++P + +++ ++ +KGYVE++ RKRFL I N + A+R A+N+ QG
Sbjct: 803 YFKTYPDIRAYMDESIEVAKEKGYVETIYKRKRFLPDINSHNAIVRGYAERNAINAPIQG 862
Query: 2085 SAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKE 2144
SAADIIK+AM+ I + F+ R +++LQVHDEL V +++
Sbjct: 863 SAADIIKVAMVRIFN---------------RFETEGLRSKMILQVHDELNFNVYKDELEK 907
Query: 2145 AVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+V ME+A L VPL+ G W
Sbjct: 908 VKQIVLDEMENAIKLQVPLIADCGEGVNW 936
>gi|269925881|ref|YP_003322504.1| DNA polymerase I [Thermobaculum terrenum ATCC BAA-798]
gi|269789541|gb|ACZ41682.1| DNA polymerase I [Thermobaculum terrenum ATCC BAA-798]
Length = 930
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 274/545 (50%), Gaps = 50/545 (9%)
Query: 1644 LSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQ--MR 1701
+SP++ D I +++L ++ L+ RL + + G+ KNQ M
Sbjct: 418 VSPLYF----DTSIAAFLL-----NETSVGLKDLAATRLGIQMTTIDSLIGKGKNQKTML 468
Query: 1702 RAAHNGC----CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVD 1757
+ + C C T L ++L K +V +L + +E+PLV VLADME+ G+ +D
Sbjct: 469 EVSVDECARYACADADMTFRLFTMLEKEIVERKLQDLFYTLEMPLVPVLADMEMTGVAID 528
Query: 1758 MEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQH 1817
+ L +++R +E + Y +AG +F+L + ++ L+ L L +G K +
Sbjct: 529 ADALKSLSTKLYEQIRDIESQIYEIAGYEFNLKSPQQLSKFLFQDLGL---KGIRKTSKG 585
Query: 1818 PSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQT 1877
STD L+ L +HP++ +I +R L KL + + ++ + +S ST + LH ++ QT
Sbjct: 586 YSTDAATLEALSGQHPVIDLILSYRQLTKLKDTYVDALPLM--VSRSTGR--LHTNFSQT 641
Query: 1878 STATGRLSMEEPNLQCVEHMVEF-KMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLA 1936
S TGRL+ +PNLQ + K + G+ E ++ + E +LL+
Sbjct: 642 SAVTGRLASSDPNLQNIPIRSSLGKEVRKAFVAGSPEKNNAIFD---------EPSVLLS 692
Query: 1937 ADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIY 1996
ADYSQIELR++AH + +P L S+ D+ + A+R G +SV R K + +
Sbjct: 693 ADYSQIELRVLAHVTDEPKLKEAFSR-DIDIHALTASRLFGVPIESVDDNMRRMGKTINF 751
Query: 1997 GILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRK 2056
GI+YGM L+ EA +K + FP V ++ + +KGYVE+ GR+
Sbjct: 752 GIIYGMSGFRLARDTGLEQREANLFVKRYMDQFPRVKAYFEQLIKEAEKKGYVETPLGRR 811
Query: 2057 RFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSII-VGGVYKPDSSLAAN 2115
R+L I N + + A+R A+N QG AADIIK AMI++HS + G+
Sbjct: 812 RYLPDITSSNPQRREAARRAAINMPIQGMAADIIKQAMIDVHSALEREGI---------- 861
Query: 2116 FQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGS 2175
+ +++LQVHDEL+ EV S + A ++ + M +A L VPL+V+ + G WG
Sbjct: 862 ------KAKMILQVHDELLFEVAESQLDRAAEVIVREMSTAFDLSVPLVVEAEYGPNWGE 915
Query: 2176 LEPFQ 2180
+ P +
Sbjct: 916 MTPIR 920
>gi|152992904|ref|YP_001358625.1| DNA polymerase I [Sulfurovum sp. NBC37-1]
gi|151424765|dbj|BAF72268.1| DNA polymerase I [Sulfurovum sp. NBC37-1]
Length = 898
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 240/447 (53%), Gaps = 44/447 (9%)
Query: 1731 LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
L++ ++E P +NVL ME GI VD + L + L L + + L+G +F++
Sbjct: 496 LLKEAKDVEYPFINVLIRMERLGIKVDQVKLETLKKTLSEDLHRLTSEIHELSGSEFNIR 555
Query: 1791 TAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNC 1850
+ + VL+ HL L +G K K ST++ L L+HEHP++ I E+R K+L+
Sbjct: 556 STQQLGVVLFQHLGL---KGGKKTKTGYSTNEAVLQSLKHEHPVIGKILEYREYHKMLST 612
Query: 1851 TLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGG 1910
+ + LA+ ++ YT ++QT TATGRLS ++PNLQ + S
Sbjct: 613 YVEPLLKLAKKDEKSRIYT---SFIQTGTATGRLSSKDPNLQNIPVRSTLGRS------- 662
Query: 1911 NAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
R+ F+ ++E + L++ DYSQIELRL+AHFSKD AL+ +K D+
Sbjct: 663 ----------VREAFV-AKEGYKLVSIDYSQIELRLLAHFSKDAALMEAFNKG-TDIHMA 710
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFP 2030
A + G E +R+ K + +G+LYGMGP LS++L +S EAKE I ++ +SFP
Sbjct: 711 TAVKLFGEEE---AKAKRNFAKSVNFGLLYGMGPKKLSDELGITSAEAKEIIANYFASFP 767
Query: 2031 GVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADII 2090
V ++L GYVE+L R+R + N +K+ R++VN++ QGSAAD+I
Sbjct: 768 TVKNFLEGIQERVKIDGYVETLLKRRRIFD-YENANGMQKAAYMRESVNTVFQGSAADLI 826
Query: 2091 KIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQ 2150
K++M +I S+I+ D +L A+ +LLQ+HDEL+ E+ +++
Sbjct: 827 KLSMNDIDSMII------DEALEAH---------MLLQIHDELIFEIREDQVEKISKRFV 871
Query: 2151 KCMESAALLLVPLLVKIQVGSTWGSLE 2177
ME L VPL+ + VG +WG L+
Sbjct: 872 HVMEHIWELEVPLVCSVSVGDSWGELK 898
>gi|394991801|ref|ZP_10384599.1| DNA polymerase I [Bacillus sp. 916]
gi|393807346|gb|EJD68667.1| DNA polymerase I [Bacillus sp. 916]
Length = 879
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++I+ P + ++ KE + S+ A + + + + R+
Sbjct: 395 FDALLAAYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADHLARKA 454
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
+ +L L L +E ++E+PL +L +ME G+ VD+E + L+ KL
Sbjct: 455 SAVNSLRDKLLDALEENNQLELYEDLELPLALILGEMESMGVKVDVERLKRMGEELKAKL 514
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ E+K + +AG F++ + + +L+ L LP K K ST L+ L +H
Sbjct: 515 KEYEEKIHDIAGEPFNINSPKQLGVILFEKLGLP---PVKKTKTGYSTSADVLEKLADKH 571
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I ++R + KL + + + + R + +H + Q T TGRLS +PNLQ
Sbjct: 572 DIVAHILQYRQIGKLQSTYIEGLLKVTR----KDSHKVHTRFNQALTQTGRLSSTDPNLQ 627
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ AADYSQIELR++AH SK
Sbjct: 628 NIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHISK 670
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A SED V R Q K + +GI+YG+ LS+ L
Sbjct: 671 DENLIEAFTNDM-DIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGISDYGLSQNLG 729
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + SFPGV +++ +V QKGYV +L R+R++ ++ N +S
Sbjct: 730 ITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSF 789
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +AA + + RLLLQVHDE
Sbjct: 790 AERTAMNTPIQGSAADIIKKAMID---------------MAAELKEKNLKARLLLQVHDE 834
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ E I+ LV + ME A L VPL G +W
Sbjct: 835 LIFEAPKEEIEILEKLVPEVMEHALALDVPLKADYASGPSW 875
>gi|52424280|ref|YP_087417.1| DNA polymerase I [Mannheimia succiniciproducens MBEL55E]
gi|52306332|gb|AAU36832.1| PolA protein [Mannheimia succiniciproducens MBEL55E]
Length = 965
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 267/528 (50%), Gaps = 52/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHN 1706
D + S++L + N++ ++ L A + +G+ KNQ+ + A
Sbjct: 479 FDTMLESYVL----NSTGRHNMDDLAERYLGHHTIAFEDIAGKGKNQLTFDQIELKKAAE 534
Query: 1707 GCCRRVAQTRALCSVLWKLLV-SEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQAR 1765
T L LW+ + S EL++ +E+PLV+VL+ +E G+ +D L
Sbjct: 535 YAAEDADVTMKLHQTLWREVAQSPELVKLYQEMELPLVSVLSRIERNGVLIDSRALLAQS 594
Query: 1766 NLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
+KL LE KA+ LAG F+L + + +L+ L LP+ + KG PST++ L
Sbjct: 595 KEFSQKLTALENKAHELAGQHFNLASTKQLQEILFDKLGLPVLKKTPKGA--PSTNEEVL 652
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
+ L +EH + ++ EHR L+KL + + + ++ + +H + Q TATGRLS
Sbjct: 653 EELAYEHELPKLLVEHRGLSKLKSTYTDKLPQM----VNRKTGRVHTSYHQAVTATGRLS 708
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
+PNLQ + + NE+ G R FI +++ + ++AADYSQIELR
Sbjct: 709 SSDPNLQNI------PVRNEE---GR--------RIRQAFI-ARKGFKVIAADYSQIELR 750
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S D L S+ D+ AA G + ++V +++R K + +G++YGM
Sbjct: 751 IMAHLSADKGLTAAFSEGK-DIHRSTAAEIFGLALENVTAEQRRSAKAINFGLIYGMSSF 809
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS QL + +A+ + + +PGV +++ +GYVE+L GR+ +L I+
Sbjct: 810 GLSRQLGIARGDAQRYMDLYFQRYPGVQTFMTNIREKAKSQGYVETLFGRRLYLPDIQSA 869
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A+R A+N+ QG+AADIIK AMI+I I PD +
Sbjct: 870 NAMRRKAAERVAINAPMQGTAADIIKRAMIDIDKAITD---DPD-------------ILM 913
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV I+ +L++ ME+AA L VPL+V + VG W
Sbjct: 914 IMQVHDELVFEVKEDKIEHYSALIKSLMENAAQLHVPLIVDVGVGDNW 961
>gi|452856558|ref|YP_007498241.1| DNA polymerase I [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|452080818|emb|CCP22583.1| DNA polymerase I [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 879
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++I+ P + ++ KE + S+ A + + + + R+
Sbjct: 395 FDALLAAYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADHLARKA 454
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
+ +L L L +E ++E+PL +L +ME G+ VD+E + L+ KL
Sbjct: 455 SAVNSLRDKLLDALEENNQLELYEDLELPLALILGEMESMGVKVDVERLKRMGEELKAKL 514
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ E+K + +AG F++ + + +L+ L LP K K ST L+ L +H
Sbjct: 515 KEYEEKIHDIAGEPFNINSPKQLGVILFEKLGLP---PVKKTKTGYSTSADVLEKLADKH 571
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I ++R + KL + + + + R + +H + Q T TGRLS +PNLQ
Sbjct: 572 DIVAHILQYRQIGKLQSTYIEGLLKVTR----KDSHKVHTRFNQALTQTGRLSSTDPNLQ 627
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ AADYSQIELR++AH SK
Sbjct: 628 NIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHISK 670
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A SED V R Q K + +GI+YG+ LS+ L
Sbjct: 671 DENLIEAFTNDM-DIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGISDYGLSQNLG 729
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + SFPGV +++ +V QKGYV +L R+R++ ++ N +S
Sbjct: 730 ITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSF 789
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +AA + + RLLLQVHDE
Sbjct: 790 AERTAMNTPIQGSAADIIKKAMID---------------MAAELKEKNLKARLLLQVHDE 834
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ E I+ LV + ME A L VPL G +W
Sbjct: 835 LIFEAPKEEIEILEKLVPEVMEHALALDVPLKADYASGPSW 875
>gi|429506198|ref|YP_007187382.1| DNA polymerase I [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|429487788|gb|AFZ91712.1| DNA polymerase I [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
Length = 879
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++I+ P + ++ KE + S+ A + + + + R+
Sbjct: 395 FDALLAAYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADHLARKA 454
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
+ +L L L +E ++E+PL +L +ME G+ VD+E + L+ KL
Sbjct: 455 SAVNSLRDKLLDALEENNQLELYEDLELPLALILGEMESMGVKVDVERLKRMGEELKAKL 514
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ E+K + +AG F++ + + +L+ L LP K K ST L+ L +H
Sbjct: 515 KEYEEKIHDIAGEPFNINSPKQLGVILFEKLGLP---PVKKTKTGYSTSADVLEKLADKH 571
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I ++R + KL + + + + R + +H + Q T TGRLS +PNLQ
Sbjct: 572 DIVAHILQYRQIGKLQSTYIEGLLKVTR----EDSHKVHTRFNQALTQTGRLSSTDPNLQ 627
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ AADYSQIELR++AH SK
Sbjct: 628 NIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHISK 670
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A SED V R Q K + +GI+YG+ LS+ L
Sbjct: 671 DENLIEAFTNDM-DIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGISDYGLSQNLG 729
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + SFPGV +++ +V QKGYV +L R+R++ ++ N +S
Sbjct: 730 ITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSF 789
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +AA + + RLLLQVHDE
Sbjct: 790 AERTAMNTPIQGSAADIIKKAMID---------------MAAELKEKNLKARLLLQVHDE 834
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ E I+ LV + ME A L VPL G +W
Sbjct: 835 LIFEAPKEEIEILEKLVPEVMEHALALDVPLKADYASGPSW 875
>gi|326791154|ref|YP_004308975.1| DNA polymerase I [Clostridium lentocellum DSM 5427]
gi|326541918|gb|ADZ83777.1| DNA polymerase I [Clostridium lentocellum DSM 5427]
Length = 882
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 262/525 (49%), Gaps = 45/525 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKR---LSSEAAAAANRSGR-WKNQMRRAAHNGC 1708
D I +++L P ++ LE+ + ++ E +S + W N
Sbjct: 395 FDTFIAAYLLHPTNKSYDLAELEELFINKQSLMNLENLLGKGKSQKTWLQLEDEERINNL 454
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
+R ++ + + L + + +IE+PL++VL DME+ GI VD EG L
Sbjct: 455 GKRSQLALSVTEAMKEALQEQNMTRLFYDIEMPLIDVLFDMEVEGIKVDPEGLRSYGEEL 514
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
Q L L Y AG F++ + + +L+ L +P + K K ST L+ L
Sbjct: 515 QGLLDTLTTSIYEAAGESFNINSPKQLGVILFEKLGIPCAK---KTKTGYSTAAEVLEAL 571
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
++++PIV I E+R AKL + + + +++ T++ +H + QT TATGRLS E
Sbjct: 572 KNDYPIVAQILEYRQYAKLKSTYVDGL-----LNVLTEQNKIHSTFNQTITATGRLSSTE 626
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + V+F+M + R F+PS EN I L DYSQIELR++A
Sbjct: 627 PNLQNIP--VKFEMGKK---------------IRQLFVPSSENHIFLDGDYSQIELRVLA 669
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H S DP LI K + D+ + A++ + V S +R K + +GI+YG+ LS
Sbjct: 670 HMSGDPTLIKAF-KENIDIHALTASQVFHVPFEDVTSMQRSNAKAVNFGIVYGISAFALS 728
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
E L S EA++ I + +P + ++L + Q GYVE+L RKR + +I N
Sbjct: 729 EDLKISQKEAQKYIDGYFEKYPCIKAYLDEIIDFAMQNGYVETLYHRKREIPEILASNYN 788
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+ +R A+N+ QG++ADIIKIAMI +H + + SL + +L+L
Sbjct: 789 MREFGKRVAMNTPIQGTSADIIKIAMIRVHQKL------KEHSL---------KSKLILT 833
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VHDEL+++ ++ L+++ ME AA L VPL+V + G+ W
Sbjct: 834 VHDELLIDAHKDEVEIVKKLLKEEMEHAADLSVPLVVDVHQGANW 878
>gi|251791718|ref|YP_003006439.1| DNA polymerase I [Dickeya zeae Ech1591]
gi|247540339|gb|ACT08960.1| DNA polymerase I [Dickeya zeae Ech1591]
Length = 928
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 164/460 (35%), Positives = 235/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L LW KL EL + NI++PLV VL+ ME G+ +D + L ++L
Sbjct: 505 TLRLHETLWAKLEPQPELCKVFQNIDMPLVPVLSRMERTGVLIDTTILGEHSQELTQRLA 564
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE +A+ LAG F+L + + +LY L+LP+ + KG PST++ L L +HP
Sbjct: 565 ELEVQAHELAGEAFNLSSPKQLGTILYEKLQLPVIKKTPKGA--PSTNEEVLAELALDHP 622
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ +I EHR LAKL + + + I+ T++ +H + Q TATGRLS +PNLQ
Sbjct: 623 LPKLILEHRELAKLKSTYTDKLPQM--INPLTKR--VHTSYHQAVTATGRLSSSDPNLQN 678
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ + NE R FI + E + +LAADYSQIELR+MAH S+D
Sbjct: 679 I------PVRNEQ-----------GRRIRQAFI-APEGYHILAADYSQIELRIMAHLSRD 720
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
L+ S D+ AA G D V +++R K + +G++YGM LS QL
Sbjct: 721 AGLLRAFSN-GLDIHRATAAEVFGLPLDRVTTEQRRSAKAINFGLIYGMSAFGLSRQLAI 779
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
NEA++ + + +PGV ++ +GYV +L GR+ +L I N + A
Sbjct: 780 PRNEAQKYMNLYFERYPGVQEYMERTRQQAADQGYVSTLDGRRLYLPDIHSRNAMSRKAA 839
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AMI I + Q K +L+QVHDEL
Sbjct: 840 ERAAINAPMQGTAADIIKKAMIAIDGWL---------------QQEKPLVTMLMQVHDEL 884
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V EV SV+ EA + ++ ME L VPL V I GS W
Sbjct: 885 VFEVHHSVLDEASAKIRNLMEGCMQLDVPLQVDIGTGSNW 924
>gi|332139424|ref|YP_004425162.1| DNA polymerase I [Alteromonas macleodii str. 'Deep ecotype']
gi|327549446|gb|AEA96164.1| DNA polymerase I [Alteromonas macleodii str. 'Deep ecotype']
Length = 930
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 240/461 (52%), Gaps = 42/461 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L + +W KL EL L+++E+PL VL+ ME G+ +D + Q L ++
Sbjct: 506 TLRLHNTIWAKLKEIPELKNLLIDVEVPLACVLSRMEQEGVLIDSQRLSQQSQDLAARIA 565
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LEK+ + AG F+L + + ++L+ + LPI + KG PST + L L E+P
Sbjct: 566 ELEKEVHEEAGEPFNLGSTKQLQHILFEKMSLPIIKKTPKGA--PSTSEDVLQELALEYP 623
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ I E+R L KL N + + I+ T + +H + Q TATGRLS +PNLQ
Sbjct: 624 LPKKIMEYRGLTKLKNTYTDKLPKM--INHRTGR--VHTSYHQAITATGRLSSTDPNLQN 679
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ + NE+ R F+P + N +AADYSQIELR+MAH S D
Sbjct: 680 I------PIRNEE-----------GRRVRQAFVPRKGNK-FVAADYSQIELRIMAHLSGD 721
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
L+ + HG D+ A+ G D V +++R K + +G++YGM L++QLN
Sbjct: 722 KGLLDAFA--HGKDIHKATASEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLAKQLN 779
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
NEA++ + + +PGV ++ S +KGYVE++ GR+ +L IK N +
Sbjct: 780 IPRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKG 839
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK+AMI + I S AA+ +++QVHDE
Sbjct: 840 AERAAINAPMQGTAADIIKMAMIKVDDWI--------SKNAAD------DVTMMMQVHDE 885
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV E+ + V + MESAA L VPL+V+ VG W
Sbjct: 886 LVFEIKEDKVDSYVKTINTLMESAATLNVPLVVEAGVGENW 926
>gi|241896083|ref|ZP_04783379.1| DNA polymerase I [Weissella paramesenteroides ATCC 33313]
gi|241870683|gb|EER74434.1| DNA polymerase I [Weissella paramesenteroides ATCC 33313]
Length = 931
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/466 (34%), Positives = 235/466 (50%), Gaps = 44/466 (9%)
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
R+ L L L+S E + +IE+PL +LADME GI VD E LQ R+ L
Sbjct: 504 RKAMAINLLREPLLDRLLSHEQTKLYEDIELPLTKILADMESTGITVDSEQLLQMRSKLT 563
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKL-PIPEGHNKGKQHPSTDKHCLDLL 1828
++L LE+K Y AG +F++ + + VL+ +K PI K K ST L+ +
Sbjct: 564 ERLSELEQKIYQQAGHEFNIQSPKQLGVVLFEEMKYTPI----KKTKTGYSTSVEVLEKM 619
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
+ PIV I +R +AK+ + + + + S S +H +LQT T TGRLS +
Sbjct: 620 G-DVPIVESILAYRQVAKIQSTYVEGLLRVIHGSDSK----VHTRYLQTLTQTGRLSSVD 674
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + +E R F+PS +W +L+ADYSQIELR++A
Sbjct: 675 PNLQNIPVRIEEGRQ-----------------IRKAFVPSHSDWQILSADYSQIELRVLA 717
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS-VGSQERDQTKRLIYGILYGMGPNTL 2007
H + D L D+ A R G +D V R Q K + +GI+YG+ L
Sbjct: 718 HITGDKNLQAAFINGE-DIHAATARRIFGIKDDEPVEGNVRRQAKAVNFGIVYGISDFGL 776
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S+ + S EAK I+++ +P V W ++S + GYVE++ R+R+L IK
Sbjct: 777 SKNIGVSRKEAKAIIETYFDQYPDVKKWSDDIIASARETGYVETIAHRRRYLPDIKAKRF 836
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+NS QGSAADIIKIAMI + + I + + +LL
Sbjct: 837 NARSFAERTAMNSPIQGSAADIIKIAMIKVQAAI---------------EQAGMQAHMLL 881
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+ E S + + LV K M+SA L VPLLV VG++W
Sbjct: 882 QVHDELIFEAPASEMADLEKLVTKVMDSAVKLDVPLLVSSHVGASW 927
>gi|154687041|ref|YP_001422202.1| DNA polymerase I [Bacillus amyloliquefaciens FZB42]
gi|154352892|gb|ABS74971.1| PolA [Bacillus amyloliquefaciens FZB42]
Length = 879
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++I+ P + ++ KE + S+ A + + + + R+
Sbjct: 395 FDALLAAYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADHLARKA 454
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
+ +L L L +E ++E+PL +L +ME G+ VD+E + L+ KL
Sbjct: 455 SAVNSLRDKLLHALEENNQLELYEDLELPLALILGEMESMGVKVDVERLKRMGEELKAKL 514
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ E+K + +AG F++ + + +L+ L LP K K ST L+ L +H
Sbjct: 515 KEYEEKIHDIAGEPFNINSPKQLGVILFEKLGLP---PVKKTKTGYSTSADVLEKLADKH 571
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I ++R + KL + + + + R + +H + Q T TGRLS +PNLQ
Sbjct: 572 DIVAHILQYRQIGKLQSTYIEGLLKVTR----KDSHKVHTRFNQALTQTGRLSSTDPNLQ 627
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ AADYSQIELR++AH SK
Sbjct: 628 NIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVLAHISK 670
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A SED V R Q K + +GI+YG+ LS+ L
Sbjct: 671 DENLIEAFTNDM-DIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGISDYGLSQNLG 729
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + SFPGV +++ +V QKGYV +L R+R++ ++ N +S
Sbjct: 730 ITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSF 789
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +AA + + RLLLQVHDE
Sbjct: 790 AERTAMNTPIQGSAADIIKKAMID---------------MAAELKEKNLKARLLLQVHDE 834
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ E I+ LV + ME A L VPL G +W
Sbjct: 835 LIFEAPKEEIEILEKLVPEVMEHALALDVPLKADYASGPSW 875
>gi|397904016|ref|ZP_10504947.1| DNA polymerase I [Caloramator australicus RC3]
gi|343178762|emb|CCC57846.1| DNA polymerase I [Caloramator australicus RC3]
Length = 850
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 232/439 (52%), Gaps = 47/439 (10%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PLV VLA+ME+ G VD E + L +++ L + Y AG +F++ + +
Sbjct: 452 IELPLVEVLAEMEINGFKVDKETLNKIGFQLSEEIDILTGQIYDFAGEEFNINSPKQLGV 511
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ L LP+ + K K STD L+ L HPI+ I ++R L KL + +
Sbjct: 512 ILFEKLNLPVIK---KTKTGYSTDAEVLEELLPHHPIIEKIIQYRQLIKLKTTYIDGLMD 568
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
++ +H ++ QT TATGR+S EPNLQ + +E G
Sbjct: 569 AI-----SEDGKIHSNFNQTVTATGRISSTEPNLQNIPIKLE---------QGR------ 608
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R F+P+ +++++L+ADYSQIELR++AH SKD LI +K D+ T A+ G
Sbjct: 609 --QIRRAFVPTDDDYVILSADYSQIELRVLAHLSKDENLIDAFTKGQ-DIHTRTASEVFG 665
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
+ V +R + K + +GI+YG+ L++ L S EAKE I+++ + GV ++L
Sbjct: 666 VKMEEVTPLQRSRAKAVNFGIVYGLSDFGLAKDLKISRKEAKEYIENYFERYKGVRNYLD 725
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
V +KGYV ++ R R++ +I+ N K +R A+N+ QGSAADIIKIAMI +
Sbjct: 726 WIVDFAKEKGYVTTIMNRIRYIPEIRSTNKTVKMLGERLAMNTPVQGSAADIIKIAMIKV 785
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKG---RCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
F+ LK + R++LQVHDEL++E ++ +V+ ME
Sbjct: 786 ------------------FKRLKTEGLKSRIILQVHDELIIETYKDELENVKKIVKYEME 827
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
+A L+VPL+V I VG W
Sbjct: 828 NAVKLVVPLVVDIHVGDNW 846
>gi|269797839|ref|YP_003311739.1| DNA polymerase I [Veillonella parvula DSM 2008]
gi|269094468|gb|ACZ24459.1| DNA polymerase I [Veillonella parvula DSM 2008]
Length = 873
Score = 231 bits (589), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 228/446 (51%), Gaps = 40/446 (8%)
Query: 1729 EELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFS 1788
EEL IE+PL++ L ME GI +D E + +++L ++++ Y LAG F+
Sbjct: 465 EELWSLYETIELPLIHTLVVMEKNGIYIDTEKLAETTTRFKEELAQVQQEIYELAGENFN 524
Query: 1789 LYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLL 1848
+ + + +L+ + LPI + K K STD LD+LRHE PIV I +R++AKL+
Sbjct: 525 INSPKQLGVILFEKMNLPIIK---KTKTGYSTDAEVLDMLRHESPIVEKILAYRSVAKLV 581
Query: 1849 NCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIY 1908
+ + C + ++ + +H + Q TATGRLS +PNLQ + E +I
Sbjct: 582 S----TYCEGLAVLINDKTRRIHTTFNQMVTATGRLSSSDPNLQNIPVRTE---KGREI- 633
Query: 1909 GGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVF 1968
R F P L++ADYSQIELR++AH S D ALI + D+
Sbjct: 634 -------------RALFYPGAGYDTLVSADYSQIELRILAHLSGDEALIKAFVEGK-DIH 679
Query: 1969 TMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSS 2028
AA G+++D V S+ER K + +GI+YG+ LS L + EAK I + S
Sbjct: 680 RFTAAEVLGKAQDDVTSEERSHAKAINFGIIYGISDFGLSRDLGITRGEAKNYIDLYFSR 739
Query: 2029 FPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAAD 2088
+P V ++ V H+ G V ++ GR+R L I N +S A+R A+N+ QG+AAD
Sbjct: 740 YPKVKEYMDRMVQEAHETGKVRTMFGRQRELPDINSRNFNRRSFAERTAMNTPIQGTAAD 799
Query: 2089 IIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSL 2148
IIK+AM + + + + RLLLQVHDELVLEV S ++ L
Sbjct: 800 IIKLAM---------------NQMEQKLEEQNFKSRLLLQVHDELVLEVVNSELEAIEEL 844
Query: 2149 VQKCMESAALLLVPLLVKIQVGSTWG 2174
++ M+S L VPL+V + W
Sbjct: 845 LRNTMQSVVELQVPLIVDVHHAENWA 870
>gi|86140808|ref|ZP_01059367.1| putative DNA polymerase I [Leeuwenhoekiella blandensis MED217]
gi|85832750|gb|EAQ51199.1| putative DNA polymerase I [Leeuwenhoekiella blandensis MED217]
Length = 948
Score = 231 bits (589), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 229/436 (52%), Gaps = 38/436 (8%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IEIPLV VLADMEL GI +D E L + LEK Y AG +F++ + +
Sbjct: 547 IEIPLVQVLADMELEGINLDQEFLGSLSEALNNDIASLEKSIYEEAGEEFNIGSPKQLGE 606
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL + Q+ ST + L L +H IV + ++R L+KL + + ++
Sbjct: 607 ILFDKLKLVDKPKKTRTGQY-STAEDVLSYLAPDHEIVQHVLDYRGLSKLKSTYVDALP- 664
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
A+++ T + +H ++QT ATGRLS PNLQ + E
Sbjct: 665 -AQVNAKTGR--VHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQ-------------- 707
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R F+P E+++LLAADYSQIELR++A S++ ++ + D+ AA+
Sbjct: 708 ---VRKAFVPRNEDYVLLAADYSQIELRIIAALSQEETMMKAFQEGE-DIHASTAAKVFN 763
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
D V ++R K + +GI+YG+ LS Q + + +E+KE I ++ ++P + +++
Sbjct: 764 VPIDEVTREQRSNAKTVNFGIIYGVSAFGLSNQTDLTRSESKELIDTYYKTYPKLRNYMS 823
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
V + GYV ++ GR+R+L I N + A+R AVN+ QGSAADIIKIAMI I
Sbjct: 824 EQVDFARENGYVSTVLGRRRYLKDINSSNAVVRGAAERNAVNAPIQGSAADIIKIAMIKI 883
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA 2157
H + D L R ++LLQVHDELV +V S ++E L++ ME A
Sbjct: 884 HHKL------KDKGL---------RTKMLLQVHDELVFDVYKSELEEVQELIKSEMEHAF 928
Query: 2158 LLLVPLLVKIQVGSTW 2173
L VPL V++ +G W
Sbjct: 929 KLDVPLDVEVGLGDNW 944
>gi|457094480|gb|EMG24999.1| DNA polymerase I [Streptococcus parauberis KRS-02083]
Length = 879
Score = 231 bits (589), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 238/454 (52%), Gaps = 41/454 (9%)
Query: 1721 VLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAY 1780
+L KL V++E + +IE+PL NVLA ME+ GI V+ + + + L ++ Y
Sbjct: 462 ILDKLAVNKEE-DLYFDIELPLANVLAKMEIAGITVNKTALQEMAEQNKAVIESLTEEIY 520
Query: 1781 TLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKE 1840
+AG +F++ + + ++L+ ++LP+ E K K ST L+ L PIV I +
Sbjct: 521 EMAGEEFNINSPKQLGSILFEKMQLPL-EMTKKTKTGYSTAVDVLERLAPIAPIVAKILD 579
Query: 1841 HRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEF 1900
+R ++KL + + L MS K +H ++Q T TGRLS +PNLQ +
Sbjct: 580 YRQISKLQST---YVIGLQDYIMSDGK--IHTRYIQDLTQTGRLSSSDPNLQNIP----- 629
Query: 1901 KMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLL 1960
++ ++ R F+PS E+ +LL++DYSQIELR++AH S D LI
Sbjct: 630 -----------VRLEQGRL-IRKAFLPSSEDAVLLSSDYSQIELRVLAHISGDEHLIAAF 677
Query: 1961 SKPHGDVFTMIAARWTG-RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAK 2019
K + D+ T A R G E+ V +R K + +GI+YG+ LS L + +AK
Sbjct: 678 -KENADIHTSTAMRVFGIEKEEDVTPNDRRNAKAVNFGIVYGISDFGLSNNLGITRKKAK 736
Query: 2020 EKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVN 2079
+ I+++ +PG+ ++ V GYVE+L R+R L I N +S A+R A+N
Sbjct: 737 DYIETYFERYPGIKEYMETVVRDARDTGYVETLFNRRRELPDINSRNFNIRSFAERTAIN 796
Query: 2080 SICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDP 2139
S QGSAADI+KIAMIN+ + G +K ++LLQVHDE+VLEV
Sbjct: 797 SPIQGSAADILKIAMINLDKALNEGQFK---------------AKMLLQVHDEIVLEVPN 841
Query: 2140 SVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++ +LV+K ME A L VPLL G TW
Sbjct: 842 DELEAIKALVKKTMEGAVDLAVPLLADENTGKTW 875
>gi|167753813|ref|ZP_02425940.1| hypothetical protein ALIPUT_02098 [Alistipes putredinis DSM 17216]
gi|167658438|gb|EDS02568.1| DNA-directed DNA polymerase [Alistipes putredinis DSM 17216]
Length = 959
Score = 231 bits (589), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 239/461 (51%), Gaps = 41/461 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
T L VLW + +L L IE P++ VLA++E+ G+ +D E + L K L
Sbjct: 534 TLRLKQVLWPKVEELDLAGLYLEIEEPMIAVLAEIEMAGVRIDSEALAEYAVELNKTLND 593
Query: 1775 LEKKAYTLAGM-KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE LA ++ +A + VL+G L++ K KQ ST++ L H++
Sbjct: 594 LEGDIRRLADEPSLNVNSARQLGEVLFGKLRIAEKPKMTKTKQF-STEEEYLQTFAHKYE 652
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
IV I E+R + KLL+ + ++ L ++ T K +H + Q TATGRLS PNLQ
Sbjct: 653 IVDKILEYRGVKKLLSTYVEALPLL--VNPVTGK--IHTSFNQAVTATGRLSSTNPNLQN 708
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ D R FIPS + +LL+ADYSQ+ELRLMAH S D
Sbjct: 709 IPVR-----------------DELGRRIRKAFIPSDDEHLLLSADYSQVELRLMAHLSGD 751
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
+LI HG DV AAR G+ V S ER + K +GI+YG+ LS++L+
Sbjct: 752 ESLIAAFE--HGEDVHAATAARLFGKEVAEVDSDERRKAKTANFGIIYGISAFGLSQRLD 809
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
EAKE I+ + +S+P V ++ V + GYV ++ GR+R+L+ I N +
Sbjct: 810 IPRKEAKEIIEGYFASYPKVKEYMDRVVEEAKRDGYVSTIFGRRRYLNDIASRNAVARGL 869
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R AVN+ QGSAADI+KIAMI + + F+ R +++LQVHDE
Sbjct: 870 AERNAVNAPIQGSAADIMKIAMIRV---------------SRRFREEGIRSKVILQVHDE 914
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV+++ S + +++V + MESAA L V L+V VG W
Sbjct: 915 LVVDMLRSEQERVIAIVTEAMESAAALRVRLVVDCGVGDNW 955
>gi|94501578|ref|ZP_01308095.1| DNA polymerase I [Bermanella marisrubri]
gi|94426261|gb|EAT11252.1| DNA polymerase I [Oceanobacter sp. RED65]
Length = 916
Score = 231 bits (589), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 240/460 (52%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VLW +L E L+ +E+PLV VL +ME G V+ + Q + ++++L+
Sbjct: 493 TLRLHQVLWPQLEADESLLTLYKKVELPLVQVLTNMEYVGASVNADKLHQQSSEIEQRLQ 552
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE+KA+ +AG F+L + + + + L+LP+ + KG+ PST + L L H++
Sbjct: 553 ELERKAHDIAGEVFNLGSTKQLQAIFFEKLELPVIKKTPKGQ--PSTAEEVLVELSHDYE 610
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI EHR LAKL N + + ++++ +H + Q TATGRLS +PNLQ
Sbjct: 611 LPKVILEHRGLAKLKNTYTDKLP----LMINSKSQRVHTSYHQAVTATGRLSSSDPNLQN 666
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ + NE+ KI + F P E + L+AADYSQIELR+MAH S D
Sbjct: 667 I------PIRNEE---------GRKIR-QAFEAP--EGYTLVAADYSQIELRIMAHLSGD 708
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
L+ K D+ AA E V +++R + K + +G++YGM L+ QL
Sbjct: 709 KGLLDAF-KNGKDIHRATAAEIMEVDEADVDNEQRRRAKAVNFGLIYGMSAFGLARQLGI 767
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
+EA+E I + +PGV ++ ++GYVE+L GR+ +L +I N + A
Sbjct: 768 GRSEAQEYIDKYFDRYPGVKKYMESTRELAAKQGYVETLFGRRLYLPEINSRNGMRRQAA 827
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AMI +H I + +++QVHDEL
Sbjct: 828 ERTAINAPMQGTAADIIKRAMIKMHQWIQESAHD---------------VHMIMQVHDEL 872
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+ EV + + ++ ME+AA L VPLLV + G W
Sbjct: 873 IFEVPDGQLDAVSAEIKSIMEAAADLDVPLLVDVGHGDNW 912
>gi|333905983|ref|YP_004479854.1| DNA polymerase I [Streptococcus parauberis KCTC 11537]
gi|333121248|gb|AEF26182.1| DNA polymerase I [Streptococcus parauberis KCTC 11537]
Length = 879
Score = 231 bits (589), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 238/454 (52%), Gaps = 41/454 (9%)
Query: 1721 VLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAY 1780
+L KL V++E + +IE+PL NVLA ME+ GI V+ + + + L ++ Y
Sbjct: 462 ILDKLAVNKEE-DLYFDIELPLANVLAKMEIAGITVNKTALQEMAEQNKAVIESLTEEIY 520
Query: 1781 TLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKE 1840
+AG +F++ + + ++L+ ++LP+ E K K ST L+ L PIV I +
Sbjct: 521 EMAGEEFNINSPKQLGSILFEKMQLPL-EMTKKTKTGYSTAVDVLERLAPIAPIVAKILD 579
Query: 1841 HRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEF 1900
+R ++KL + + L MS K +H ++Q T TGRLS +PNLQ +
Sbjct: 580 YRQISKLQST---YVIGLQDYIMSDGK--IHTRYIQDLTQTGRLSSSDPNLQNIP----- 629
Query: 1901 KMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLL 1960
++ ++ R F+PS E+ +LL++DYSQIELR++AH S D LI
Sbjct: 630 -----------VRLEQGRL-IRKAFLPSSEDAVLLSSDYSQIELRVLAHISGDEHLIAAF 677
Query: 1961 SKPHGDVFTMIAARWTG-RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAK 2019
K + D+ T A R G E+ V +R K + +GI+YG+ LS L + +AK
Sbjct: 678 -KENADIHTSTAMRVFGIEKEEDVTPNDRRNAKAVNFGIVYGISDFGLSNNLGITRKKAK 736
Query: 2020 EKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVN 2079
+ I+++ +PG+ ++ V GYVE+L R+R L I N +S A+R A+N
Sbjct: 737 DYIETYFERYPGIKEYMETVVRDARDTGYVETLFNRRRELPDINSRNFNIRSFAERTAIN 796
Query: 2080 SICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDP 2139
S QGSAADI+KIAMIN+ + G +K ++LLQVHDE+VLEV
Sbjct: 797 SPIQGSAADILKIAMINLDKALNEGQFK---------------AKMLLQVHDEIVLEVPN 841
Query: 2140 SVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++ +LV+K ME A L VPLL G TW
Sbjct: 842 DELEAIKALVKKTMEGAVDLAVPLLADENTGKTW 875
>gi|392961136|ref|ZP_10326599.1| DNA polymerase I [Pelosinus fermentans DSM 17108]
gi|421055126|ref|ZP_15518090.1| DNA polymerase I [Pelosinus fermentans B4]
gi|421058994|ref|ZP_15521627.1| DNA polymerase I [Pelosinus fermentans B3]
gi|421067087|ref|ZP_15528602.1| DNA polymerase I [Pelosinus fermentans A12]
gi|421072006|ref|ZP_15533119.1| DNA polymerase I [Pelosinus fermentans A11]
gi|392440229|gb|EIW17917.1| DNA polymerase I [Pelosinus fermentans B4]
gi|392446594|gb|EIW23879.1| DNA polymerase I [Pelosinus fermentans A11]
gi|392450875|gb|EIW27882.1| DNA polymerase I [Pelosinus fermentans A12]
gi|392454387|gb|EIW31224.1| DNA polymerase I [Pelosinus fermentans DSM 17108]
gi|392459733|gb|EIW36116.1| DNA polymerase I [Pelosinus fermentans B3]
Length = 874
Score = 231 bits (589), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 240/458 (52%), Gaps = 42/458 (9%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL-LQKKLRYLE 1776
+ +L + L+ ELI IE+PLV VL+ +E GI VD E LQ ++ + K+ L
Sbjct: 455 IYPILKQGLIDNELIHLYNEIELPLVEVLSIVENHGIKVDRE-YLQIMSVEIGVKIELLL 513
Query: 1777 KKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVP 1836
K Y AG F++ + + +L+ L LP+ K K STD L+ L +H IV
Sbjct: 514 TKIYQCAGETFNVNSPKQLGVILFEKLNLPV---MKKTKTGYSTDAEVLEKLAGQHAIVD 570
Query: 1837 VIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEH 1896
I E+R LAKL + L + L IS +T + +H + Q TATGRLS EPNLQ +
Sbjct: 571 TILEYRMLAKLKSTYLDGMVDL--ISPATGR--IHTTFNQMVTATGRLSSSEPNLQNIPI 626
Query: 1897 MVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPAL 1956
E R+ FIP L++ADYSQIELR++A S D L
Sbjct: 627 RTEIGK-----------------KIRELFIPGAGYDYLMSADYSQIELRVLADMSGDANL 669
Query: 1957 IGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSN 2016
I K DV T AA + V S+ R + K + +GI+YG+ LS S
Sbjct: 670 IESFDKEQ-DVHTRTAAEVFEVPMEEVTSELRSRAKAVNFGIVYGISDYGLSRDTGVSRK 728
Query: 2017 EAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQ 2076
EA I+++ + + GV +++ +V + HQ+GYV +L GR+R+L I N ++S A+R
Sbjct: 729 EAGRYIENYFTKYNGVKAFMDKSVGAAHQQGYVTTLLGRRRYLPDINSKNFNQRSFAERT 788
Query: 2077 AVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLE 2136
A+N+ QG+AADIIK AM++++ + Q K + R+LLQVHDELVLE
Sbjct: 789 AMNTPIQGTAADIIKKAMVDVYRAL---------------QKEKLKSRILLQVHDELVLE 833
Query: 2137 VDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
V +++ +V++ ME + L VPL+V +++G W
Sbjct: 834 VPLGEVEQVSKIVKEAMEQSVALKVPLVVDVKIGKNWA 871
>gi|94986547|ref|YP_594480.1| DNA polymerase I [Lawsonia intracellularis PHE/MN1-00]
gi|442555361|ref|YP_007365186.1| DNA polymerase I [Lawsonia intracellularis N343]
gi|94730796|emb|CAJ54158.1| DNA polymerase I-3'-5' exonuclease and polymerase domains [Lawsonia
intracellularis PHE/MN1-00]
gi|441492808|gb|AGC49502.1| DNA polymerase I [Lawsonia intracellularis N343]
Length = 868
Score = 231 bits (589), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 242/454 (53%), Gaps = 45/454 (9%)
Query: 1726 LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
L + +L+E + ++E+PL+ VLADME G+ +D + +Q L +L + Y AG
Sbjct: 454 LKTAQLLELMDSLELPLIPVLADMEAVGVVLDDQNLKIFLVEVQNSLDHLTETIYHEAGG 513
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLA 1845
F++ +A + ++L+ L+LP + G+ ST + L+ L +HPI+ I E+R L
Sbjct: 514 SFNIRSAQQLGDILFNQLELPAAKKTRGGQA--STSQEVLEKLSGQHPIIDTILEYRKLE 571
Query: 1846 KLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNE 1905
KL + L + L + +H + Q +TATGRLS PNLQ N
Sbjct: 572 KLRSTYLEPLPRLI-----GKDGRVHTTFNQLATATGRLSSSNPNLQ-----------NI 615
Query: 1906 DIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG 1965
I G + R F SQ N +L++ADYSQ+ELR++AH+SKDP L+ +
Sbjct: 616 PIRGSLGQ------RMRSCFTASQGN-LLISADYSQVELRVLAHYSKDPTLLTAFLE-GA 667
Query: 1966 DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSF 2025
D+ T A+ +S++ V + ER K + +G++YGMGP L+++LN + NEAK+ I+ +
Sbjct: 668 DIHTRTASLLYEKSQEEVTADERRNAKTINFGLIYGMGPQKLAQELNTTLNEAKKFIQRY 727
Query: 2026 KSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGS 2085
+ + S + GYV ++ GR+R L I N + ++ A+RQA+N+I QGS
Sbjct: 728 FEHLQAIKKFYDQVEHSAKEYGYVTTIAGRRRLLPDIHSENIQLQALARRQAINTIIQGS 787
Query: 2086 AADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEA 2145
AADIIKIAM+ +H D++LA K +L+LQVHDELV+E KE
Sbjct: 788 AADIIKIAMLTVHG---------DTTLA------KMDAQLILQVHDELVVEAPEDNAKEV 832
Query: 2146 VSLVQKCMESAA----LLLVPLLVKIQVGSTWGS 2175
+ M + L+VPL+ + +G WGS
Sbjct: 833 GKRIAMLMSNVTPGGKPLIVPLVTQWSIGYDWGS 866
>gi|226950437|ref|YP_002805528.1| DNA polymerase I [Clostridium botulinum A2 str. Kyoto]
gi|226844476|gb|ACO87142.1| DNA polymerase I [Clostridium botulinum A2 str. Kyoto]
Length = 875
Score = 231 bits (589), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 149/456 (32%), Positives = 241/456 (52%), Gaps = 41/456 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L VL + + +++ E L +E PL L+ ME G VD + LQ + ++ +
Sbjct: 457 LYKVLEEKIKDQDMEELLYKVEQPLTETLSAMETEGFKVDKDILLQLEKKFKGEIESTQL 516
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ Y+++ KF++ + + +L+ L LP+ + K K ST+ LD LR +HPI+
Sbjct: 517 EIYSMSEEKFNINSPKQLGKILFEKLDLPVIK---KTKTGYSTNAEVLDKLRDKHPIIDK 573
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I +R L K+ + + + + + +H ++ QT TATGRLS EPNLQ +
Sbjct: 574 ITYYRQLTKIYSTYIEGLKAAI-----DEDGKIHSNFNQTVTATGRLSSTEPNLQNIP-- 626
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
++++M E R FIP+ + ++L+ADYSQIELR++AH S D +I
Sbjct: 627 IKYEMGRE---------------IRKVFIPNTGDSVILSADYSQIELRVLAHISDDKNMI 671
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
++ H D+ T A+ + V R K + +GI+YG+G +LS+ LN + E
Sbjct: 672 SAFNE-HDDIHTKTASEVFKVPIEEVTPLMRSNAKAVNFGIVYGIGDFSLSQDLNITRKE 730
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
AK+ I ++ +P V +L V +KGYV ++ R+R++ ++K N K+ +R A
Sbjct: 731 AKQYIDAYLERYPNVKLYLENIVEEAVEKGYVSTILNRRRYIKEVKSSNKIVKAAGERLA 790
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+NS QGSAADIIK+AM+N+H + K D NF + ++LQVHDEL+L V
Sbjct: 791 MNSPIQGSAADIIKLAMVNVHRKL-----KED-----NF-----KSSIILQVHDELILNV 835
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++ +LV+K ME L V L V I +G+ W
Sbjct: 836 HKDELERIKALVKKEMEQVLELKVGLDVDINIGNNW 871
>gi|153005315|ref|YP_001379640.1| DNA polymerase I [Anaeromyxobacter sp. Fw109-5]
gi|152028888|gb|ABS26656.1| DNA polymerase I [Anaeromyxobacter sp. Fw109-5]
Length = 899
Score = 231 bits (588), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 235/483 (48%), Gaps = 52/483 (10%)
Query: 1691 NRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADME 1750
R G W Q C A L L + L SE L+ ++E PLV VL +ME
Sbjct: 465 ERVGEWAAQ--------CA---ASLLDLAPALERALESEGLLPLYRDVERPLVPVLCEME 513
Query: 1751 LWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG 1810
GI VD + ++ LE + + AG F++ + ++A VL+ L LP+
Sbjct: 514 RAGILVDRAAMEGMSAEFGRTMQDLEARIHAAAGHPFNIASTRELAQVLFTELALPV--- 570
Query: 1811 HNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL 1870
+ K PSTD+ L+ L +H + ++ EHR LAKL + ++ L + + +
Sbjct: 571 LKRLKTGPSTDQDVLEKLAEQHELPRLVLEHRALAKLKGTYVDALPQL----VDPRDGRI 626
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQE 1930
H + Q ATGRLS +PNLQ + E +I A F P
Sbjct: 627 HTTFHQAGAATGRLSSSDPNLQNIPVRTELSR---------------RIRA-AFVAPP-- 668
Query: 1931 NWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQ 1990
W LL+ADYSQIELR++AH+S DPAL+ + DV T AA G + V S R
Sbjct: 669 GWRLLSADYSQIELRILAHYSDDPALLEAF-RLREDVHTRTAAETFGVATGEVTSDMRRI 727
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K L +GI YG+ LS++L+ EA+ I + + + GV ++ AV G
Sbjct: 728 AKVLNFGIAYGLSAFGLSQRLDLPGAEAQGIIDRYFARYAGVRRYVEKAVEDARATGESR 787
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L GR R + +I N ++ A+R A+N+ QG+AADI+K+AMI +H + G
Sbjct: 788 TLFGRARAMPEIAARNPALRNAAERTAINTPIQGTAADIVKVAMIRVHDALAGDAR---- 843
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R RLLLQVHDELVLEV + +LV++ M AA L VPL V++ VG
Sbjct: 844 -----------RARLLLQVHDELVLEVPEDELAPVEALVRREMGGAAQLKVPLDVEVGVG 892
Query: 2171 STW 2173
+W
Sbjct: 893 HSW 895
>gi|410096891|ref|ZP_11291876.1| DNA polymerase I [Parabacteroides goldsteinii CL02T12C30]
gi|409225508|gb|EKN18427.1| DNA polymerase I [Parabacteroides goldsteinii CL02T12C30]
Length = 928
Score = 231 bits (588), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 234/444 (52%), Gaps = 41/444 (9%)
Query: 1732 IEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
IE+L +IE+PL+ VL +ME+ G+ +D Q+ L L LEK+ Y LAG+KF++
Sbjct: 520 IESLFFDIEMPLIYVLVEMEVTGVKLDTVALKQSSEELTAALNNLEKEIYELAGVKFNIN 579
Query: 1791 TAADIANVLYGHLKLPIPEGHNKGKQHP-STDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
++ + VL+ HLK I E K K ST + L+ +R +HP+V + E+R L KLL+
Sbjct: 580 SSKQVGEVLFEHLK--IEEKAKKTKTGSYSTSEDILEKMRSKHPVVGKLLEYRGLKKLLS 637
Query: 1850 CTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG 1909
+ ++ L I+ T K +H + QT TATGRLS PNLQ +
Sbjct: 638 TYIDALPEL--INPETGK--VHTSFNQTVTATGRLSSTNPNLQNIPIR------------ 681
Query: 1910 GNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFT 1969
D R FIP E+ +ADYSQIELR+MAH S+D +I + D+ +
Sbjct: 682 -----DELGREIRKAFIPDNEDCTFFSADYSQIELRIMAHLSQDEHMIEAF-RSGADIHS 735
Query: 1970 MIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSF 2029
AA+ G + V R + K +GI+YG+ L+E+LN E+KE I+ + S+
Sbjct: 736 ATAAKIYGIPVEEVTGDMRRKAKTANFGIIYGISIFGLAERLNIPRAESKELIEGYFKSY 795
Query: 2030 PGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADI 2089
PG+ ++ ++ +KGYVE++ RKR+L I N + A+R A+N+ QGSAADI
Sbjct: 796 PGIRDYMDESIRIAKEKGYVETIFKRKRYLPDINSHNAIVRGYAERNAINAPIQGSAADI 855
Query: 2090 IKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLV 2149
IK+AM+ I++ F+ + +++LQVHDEL V ++ +V
Sbjct: 856 IKVAMVRIYN---------------RFEEEGLKSKMILQVHDELNFNVCQDEQEKVRQIV 900
Query: 2150 QKCMESAALLLVPLLVKIQVGSTW 2173
+ ME+A L VPL+ G W
Sbjct: 901 LEEMENAIQLQVPLIADCGEGKNW 924
>gi|346224772|ref|ZP_08845914.1| DNA polymerase I [Anaerophaga thermohalophila DSM 12881]
Length = 921
Score = 231 bits (588), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 231/459 (50%), Gaps = 38/459 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
T L L K L + +IE+PL+ VLA+ME G+ +D + LQK++R
Sbjct: 497 TFQLKEPLLKELQKYNMTSLFQDIEMPLLKVLAEMEYTGVCLDTGALKEYAKKLQKRIRE 556
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
LE + AG +F++ + + VL+ +K+ K Q+ ST++ L LR HPI
Sbjct: 557 LEAQIEREAGTEFNVSSPKQVGEVLFEKMKIDDKAKKTKSGQY-STNEEILQKLRDRHPI 615
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
V I E+R L KLLN + ++ L I+ T + LH + Q TGRLS PNLQ +
Sbjct: 616 VEHILEYRGLKKLLNTYVEALPKL--INKETGR--LHTSFNQAVVVTGRLSSSNPNLQNI 671
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
E R F+ S ++ + L+ADYSQ+ELRLMAH S+D
Sbjct: 672 PIREEEGRE-----------------MRKAFVVSDDDHLFLSADYSQVELRLMAHLSEDK 714
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+ ++ D+ AA+ D V R + K +GI+YG+ LSE+LN
Sbjct: 715 NLLEAFNRGE-DIHAATAAKIFKVEVDKVTPDMRRKAKTANFGIIYGISAFGLSERLNIP 773
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
EAKE I + +FPGV ++ A+ +KGYVE++ GR+R+L I N+ + A+
Sbjct: 774 RGEAKEIIDEYFQNFPGVRQYIDRAIKQAREKGYVETMFGRRRYLPDINSRNSVVRGVAE 833
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
R A+N+ QG+AADIIK AM+ + F+ + +++LQVHDEL
Sbjct: 834 RNAINAPIQGAAADIIKKAMVAVDRA---------------FEQENLKSKMVLQVHDELN 878
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EV S +V+K MESA L VPL V + +G W
Sbjct: 879 FEVLKSEADTVKQIVKKEMESAVSLKVPLEVDMGIGKNW 917
>gi|319788387|ref|YP_004147862.1| DNA polymerase I [Pseudoxanthomonas suwonensis 11-1]
gi|317466899|gb|ADV28631.1| DNA polymerase I [Pseudoxanthomonas suwonensis 11-1]
Length = 927
Score = 231 bits (588), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 237/460 (51%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L +E ++A+ +IE+PLV VL +E G+ VDM+ + L +++
Sbjct: 504 TLRLHRVLSARLQAEPQLQAVYRDIEMPLVQVLERIEANGVLVDMDELRRQGADLSRRML 563
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
+++A LAG F+L + + +L+ LKLP KG+ PST++ L+ + H
Sbjct: 564 EAQERATALAGRSFNLDSPKQLCALLFDELKLPALVKTPKGQ--PSTNEEALEAIADLHE 621
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ +I E+R LAKL + + + ++ + +H + Q ATGRLS +PNLQ
Sbjct: 622 LPRIILEYRGLAKLRSTYTDKLPEM----VNPETGRVHTSYHQAGAATGRLSSSDPNLQN 677
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ D + R F P L+A DYSQIELR+MAH S+D
Sbjct: 678 IP----------------IRTDDGRRIRRAFVAPPGRK--LVACDYSQIELRIMAHLSQD 719
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+G + D+ AA GR + V ER K + +G++YGMG L+ QL
Sbjct: 720 PGLLGAFAS-GADIHRATAAEVFGRPLEEVTVNERRAAKAINFGLMYGMGAFGLARQLGI 778
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
+A++ I + S +PGV ++ ++GYVE++ GR+ L I N +++ A
Sbjct: 779 DRGQAQDYIALYFSRYPGVRDYMERTREQARERGYVETVFGRRLHLEYINARNAAQRAGA 838
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AMI + D+ +A + Q R R+LLQVHDEL
Sbjct: 839 ERAAINAPMQGTAADIIKRAMIAV-----------DAWIADHAQ----RARMLLQVHDEL 883
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + E VS V + M +A L VPL+V +G+ W
Sbjct: 884 VFEADEEFVPELVSRVPELMSAAGDLSVPLVVDTGIGNNW 923
>gi|374596617|ref|ZP_09669621.1| DNA polymerase I [Gillisia limnaea DSM 15749]
gi|373871256|gb|EHQ03254.1| DNA polymerase I [Gillisia limnaea DSM 15749]
Length = 941
Score = 231 bits (588), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 232/443 (52%), Gaps = 39/443 (8%)
Query: 1732 IEALLN-IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLY 1790
IE L IEIPLV VLADMEL GI +D + L+K ++ LE+ Y A +F++
Sbjct: 533 IEKLFQEIEIPLVRVLADMELEGIKLDEKFLNSLSADLEKDIKDLEESIYEKASEEFNIA 592
Query: 1791 TAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNC 1850
+ + +L+ L+L K Q+ ST + L L HEH IV + ++R L KL N
Sbjct: 593 SPKQLGIILFEKLQLIKKPKKTKTGQY-STGEDVLSALAHEHEIVQNVLDYRGLVKLKNT 651
Query: 1851 TLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGG 1910
+ ++ S ++ +T + +H ++QT ATGRLS PNLQ + E
Sbjct: 652 YIDALPS--QVEKTTGR--VHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQ------- 700
Query: 1911 NAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTM 1970
R F+P EN+ILLAADYSQIELR++A SK+ +I D+ T
Sbjct: 701 ----------VRKAFVPRDENYILLAADYSQIELRIIAALSKEENMIKAFQSGE-DIHTS 749
Query: 1971 IAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFP 2030
AA+ + V +R K + +GI+YG+ LS Q + S E+K+ I ++ ++P
Sbjct: 750 TAAKVFNIPIEEVTRAQRGNAKTVNFGIIYGVSAFGLSNQTDLSRAESKDLIDTYYETYP 809
Query: 2031 GVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADII 2090
+ ++ + + GYV+++ GR+R+L I N + A+R AVN+ QGSAADII
Sbjct: 810 QLRKYMSDQIEFAREHGYVQTVLGRRRYLKDINSQNAIVRGAAERNAVNAPIQGSAADII 869
Query: 2091 KIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQ 2150
KIAMINIH + G +K ++LLQVHDELV + ++ +++
Sbjct: 870 KIAMINIHKKLKEGNFK---------------TKMLLQVHDELVFDAHKEELEVVRKMIK 914
Query: 2151 KCMESAALLLVPLLVKIQVGSTW 2173
+ ME+A L VPL V++ VG W
Sbjct: 915 EEMENAFKLDVPLDVELGVGENW 937
>gi|311031365|ref|ZP_07709455.1| DNA polymerase I [Bacillus sp. m3-13]
Length = 877
Score = 231 bits (588), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 171/536 (31%), Positives = 258/536 (48%), Gaps = 70/536 (13%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D I S+I+ P + S++ A A + G ++ + A + +R
Sbjct: 393 FDFIIASYIVNPSE---------------TSTDLAEIARKKGYYQIETDEAVYGKGAKRA 437
Query: 1713 A--QTRALCSVLWKLLVSEELIEALLN-------------IEIPLVNVLADMELWGIGVD 1757
Q + ++ K +E+ E+ ++ +E+PL VL +ME GI VD
Sbjct: 438 VPDQQKVADHLVRKTFAMQEMKESFIHELKDNEQLELFEELEMPLTLVLGEMEALGIKVD 497
Query: 1758 MEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQH 1817
+ L +KL +E+K + LAG KF++ + + +L+ L LP + K K
Sbjct: 498 KARLEEMGTDLGEKLEKIEEKIFDLAGEKFNINSPKQLGVILFEKLGLPPVK---KTKTG 554
Query: 1818 PSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQT 1877
ST L+ L +H ++ I +R L KL + + + + I + K +H + Q
Sbjct: 555 YSTSADVLEKLAEKHEVIQQILHYRQLGKLKSTYIEGLLKV--IHEDSNK--IHTRFNQA 610
Query: 1878 STATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAA 1937
T TGRLS +PNLQ + +E + KI R+ FIPS E+W++ AA
Sbjct: 611 LTQTGRLSSIDPNLQNIPVRLE---------------EGRKI--REAFIPSHEDWVIFAA 653
Query: 1938 DYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYG 1997
DYSQIELR++AH + D LI K D+ T A SED V S R Q K + +G
Sbjct: 654 DYSQIELRVLAHIANDEKLIEAF-KEDADIHTKTAMDVFHVSEDEVTSNMRRQAKAVNFG 712
Query: 1998 ILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKR 2057
I+YG+ LS+ L + +AK I + SFPGV ++ +V KGYV +L R+R
Sbjct: 713 IVYGISDYGLSQSLGITRKDAKTFIDRYLESFPGVKEYMEDSVLDAKDKGYVTTLLHRRR 772
Query: 2058 FLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQ 2117
+L +I N +S A+R A+N+ QGSAADIIK AMI+ +A +
Sbjct: 773 YLPEITSSNFNLRSFAERTAMNTPIQGSAADIIKKAMID---------------MANRLE 817
Query: 2118 MLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+ ++LLQVHDELV E I++ +V + ME A L VPL V GSTW
Sbjct: 818 EENMKSKVLLQVHDELVFEAPKDEIEKLKKIVPEVMEQAVELKVPLKVDYSYGSTW 873
>gi|86135059|ref|ZP_01053641.1| DNA polymerase I [Polaribacter sp. MED152]
gi|85821922|gb|EAQ43069.1| DNA polymerase I [Polaribacter sp. MED152]
Length = 945
Score = 231 bits (588), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 235/459 (51%), Gaps = 38/459 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
T L K L S + E +E+PLV+VL ME+ GI VD Q L +
Sbjct: 521 TYQLKQHFTKELDSGNVTELFNKVELPLVSVLTAMEIEGINVDTNFLKQLSTALTDDINR 580
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
LEK+ Y AG +F++ + + VL+ ++KL K Q+ T + L L EH I
Sbjct: 581 LEKEIYEQAGEEFNIASPKQLGIVLFENMKLVDKPKKTKTGQY-KTGEDILSFLAKEHKI 639
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
+ I+E+R KL + + ++ + I+ T + +H ++Q ATGRLS PNLQ +
Sbjct: 640 IRDIQEYRQYKKLQSTYVDALPN--EINKKTGR--IHTQYMQAVAATGRLSSNNPNLQNI 695
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
E EV R F+P EN++LLAADYSQIELR++A S++
Sbjct: 696 PIRTE----------RGREV-------RKAFVPKDENYVLLAADYSQIELRIIAALSEEE 738
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
+I K D+ AA+ G + V ++R K + +GI+YG+ LS Q + S
Sbjct: 739 TMINAF-KNGEDIHASTAAKVFGVDINDVTREQRSNAKTVNFGIVYGVSAFGLSNQTDLS 797
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
EAKE I ++ ++P + +++ V + GYVE++ R+R+L I N +S A+
Sbjct: 798 RGEAKELIDTYYETYPKLKAYMSAQVDFAREHGYVETVLNRRRYLKDINSRNAMVRSGAE 857
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
R AVN+ QGSAADIIK+AMINIH+ + +K ++LLQVHDELV
Sbjct: 858 RNAVNAPIQGSAADIIKLAMINIHNRFIQEGFK---------------SKMLLQVHDELV 902
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+ ++ +++ ME+A + VPL V++ +G W
Sbjct: 903 FDAHKDELETIKPIIKNEMENAFKMTVPLDVEMGIGQNW 941
>gi|423329673|ref|ZP_17307479.1| DNA polymerase I [Myroides odoratimimus CCUG 3837]
gi|404603301|gb|EKB02976.1| DNA polymerase I [Myroides odoratimimus CCUG 3837]
Length = 939
Score = 231 bits (588), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 174/603 (28%), Positives = 279/603 (46%), Gaps = 72/603 (11%)
Query: 1575 PEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGL 1634
PE+Q E K ++ E ++ K N+K I++LK ++++
Sbjct: 401 PENQDEA-KALAQQFAPFFEAENIEKVGQNLKYDIKILKQYDITVK-------------- 445
Query: 1635 ENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSG 1694
G F D I +++ PD R + L + K + G
Sbjct: 446 ---GPLF------------DTMIAHYLINPD-MRHNMDVLAETYLKYTPQPIEELIGKKG 489
Query: 1695 RWKNQMRRAAHNGCCRRVAQ----TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADME 1750
+ + MR + T L LV+ E NIEIPLVNVLADME
Sbjct: 490 KNQKTMRDIEAEIVKEYAGEDADITYQLKETFAPQLVATHTQELFDNIEIPLVNVLADME 549
Query: 1751 LWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG 1810
GI +D E + L ++ LE++ + AG +F+L + + ++L+ L++ +
Sbjct: 550 TEGIRLDTEYLKSLSDTLSTDIKLLEQRIFLEAGEEFNLASPKQLGDILFEKLQIGGSKP 609
Query: 1811 HNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL 1870
+T + L L +H IV I E R L KL N + ++ ++++ T + +
Sbjct: 610 KKTKTGQYATGEEILSDLAPKHEIVRDILEWRQLVKLQNTYVDALPD--QVNIKTNR--V 665
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQE 1930
H ++Q ATGRLS PNLQ + E R F+ E
Sbjct: 666 HTEYMQAVAATGRLSSNNPNLQNIPIRTERGRQ-----------------VRKAFVARDE 708
Query: 1931 NWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQ 1990
N++LLAADYSQIELR++A S++P ++ + D+ AA+ + V ++R
Sbjct: 709 NYVLLAADYSQIELRIIAALSQEPNMLESFQRGE-DIHRSTAAKVFNVPLEEVTKEQRSH 767
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +GI+YG+ LS Q N S E+KE I ++ +++P + S++ + + GYV+
Sbjct: 768 AKTVNFGIIYGVSAFGLSNQTNLSRAESKELIDAYYATYPKLKSYIATQIDFAREHGYVQ 827
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
++ GR+R+L I N K A+R AVN+ QGSAADIIKIAMINI+ + +K
Sbjct: 828 TILGRRRYLKDIHSHNAVVKGAAERNAVNAPIQGSAADIIKIAMININKKLTAENWK--- 884
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
++LLQVHDELV + ++ ++V+ ME+A L VPL+V + G
Sbjct: 885 ------------SKMLLQVHDELVFDAHKEELEALKTMVKSEMENAYKLDVPLIVDLGTG 932
Query: 2171 STW 2173
W
Sbjct: 933 ENW 935
>gi|406833303|ref|ZP_11092897.1| DNA polymerase I [Schlesneria paludicola DSM 18645]
Length = 959
Score = 231 bits (588), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/561 (29%), Positives = 271/561 (48%), Gaps = 56/561 (9%)
Query: 1629 GTSLGLENVGSSFLLLSPVHL-----KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRL- 1682
GT + +N+ +LS V+L + G+D + ++L D + + NLE +KK L
Sbjct: 443 GTEIANQNIKYDLTVLSRVNLSIPLDQLGVDPMVGDYLL---DSGARSHNLEVLIKKYLG 499
Query: 1683 -SSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQ----TRALCSVLWKLLVSEELIEALLN 1737
S +A +G+ + M A + + T + ++ L +E L +
Sbjct: 500 LDSIPISALIGTGKQQKNMIDIAVDKVAEYATEDADLTLRIVDIISDRLKTEGLYDLYWQ 559
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E PL+ +LA+ME GI VD + + L ++L ++ Y LAG +F++ + +
Sbjct: 560 LERPLIPILAEMEQTGIRVDADELRRQSEALTERLDQTIREIYELAGHEFNIDSPIQLRK 619
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
VL+ KLP+ K + PSTD+ L+ L HP+ I +HR L+KL L ++
Sbjct: 620 VLFDEQKLPV---RRKTQTGPSTDQEVLEELALLHPLPAKIMDHRHLSKLKGTYLDALPG 676
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE-HMVEFKMSNEDIYGGNAEVDH 1916
L + +H + Q ATGRLS +PNLQ + +E ++
Sbjct: 677 L----IHPMTGRIHCSFNQVVAATGRLSSSDPNLQNIPIRTMEGRL-------------- 718
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R F+P ++ W L+ ADYSQIELR++AHF DPAL + D+ + +A+
Sbjct: 719 ----IRKAFVPKEQGWKLVCADYSQIELRVLAHFCGDPALKQAFEQ-GVDIHSAVASEVY 773
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G + V S +R K + +G++YG P L+ L + A + I + + + GV ++
Sbjct: 774 GVALADVDSNQRRVAKAVNFGVIYGQSPFGLAAVLGIEKDVAAKFIDDYFTKYAGVKRFI 833
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
+ SCH G+ +++ GR+R + I+ S +R AVNS+ QGSAAD+IK AMI
Sbjct: 834 DETLQSCHDTGFAKTIMGRRRAIEGIRLQRGPNLSMPERTAVNSVIQGSAADLIKKAMIQ 893
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
I +A + R+LLQ+HDELV E + + + LV+ ME A
Sbjct: 894 I---------------SARLKRESHPARMLLQIHDELVFEAPDADVPSLIELVKYEMEHA 938
Query: 2157 ALLLVPLLVKIQVGSTWGSLE 2177
L VPL+V I G W +E
Sbjct: 939 ITLDVPLVVDIATGDNWLGVE 959
>gi|296132483|ref|YP_003639730.1| DNA polymerase I [Thermincola potens JR]
gi|296031061|gb|ADG81829.1| DNA polymerase I [Thermincola potens JR]
Length = 886
Score = 231 bits (588), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 162/530 (30%), Positives = 266/530 (50%), Gaps = 58/530 (10%)
Query: 1649 LKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGC 1708
++ G D + +++L P SN +L K L E + + +
Sbjct: 410 VRAGFDTMLAAYLLDPS---VSNLDLAALSIKYLGQELSPGED-------------YRSF 453
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL- 1767
C + L VL + L +++ ++E+PL+++LADME G+ +D E L+A ++
Sbjct: 454 CAQADIILRLVPVLHEKLAELNMLDLYFDVEMPLLHILADMEFSGVKLDKE-YLEAMSVD 512
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++ + Y LAG +F++ + + +L+ L LP+ + K K STD L+
Sbjct: 513 LSTEIDRITGDIYRLAGEEFNINSTRQLGTILFEKLGLPVIK---KTKTGYSTDVEVLET 569
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV + +R L KL + + + L I+ T K +H + QT TATGRLS
Sbjct: 570 LAERHEIVARVLHYRQLVKLKSTYVDGLIPL--INPVTGK--VHTTFNQTVTATGRLSST 625
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + +I R F+PS+ WI+L+ADYSQIELR++
Sbjct: 626 EPNLQNIPIRME---------------EGRRI--RKAFVPSEPGWIILSADYSQIELRIL 668
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D + D+ T AA G S + V + R + K + +GI+YG+ L
Sbjct: 669 AHLSGDERFVQAFRNDE-DIHTRTAAEVFGVSLEEVTGEMRSRAKAVNFGIVYGISDFGL 727
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ ++ S EA++ I+++ + + G+ +L V ++GYV +L R+R+L I N
Sbjct: 728 AKNISVSRKEARQYIENYFARYAGIKKYLEETVRLAREQGYVTTLLNRRRYLPDILSPNR 787
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S +R A+N+ QGSAADIIK+AM+ + A + + R+LL
Sbjct: 788 NIRSFGERTAMNTPIQGSAADIIKLAMVRV---------------ADCLKKEGLKARMLL 832
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
QVHDEL+ E P + + +V++CME+ L VPL V ++ G W +E
Sbjct: 833 QVHDELIFEAPPEELPKVTGIVRECMENTVKLTVPLKVDMKKGFNWYDME 882
>gi|422703429|ref|ZP_16761251.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1302]
gi|315165261|gb|EFU09278.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1302]
Length = 882
Score = 231 bits (588), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 243/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 453 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 512
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 513 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 569
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 570 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 624
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 625 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 667
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V S R Q K + +GI+YG+
Sbjct: 668 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTSNMRRQAKAVNFGIVYGISDY 725
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 726 GLSQNLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 785
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 786 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMARRLKEEKLQATM 830
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 831 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 878
>gi|110835520|ref|YP_694379.1| DNA polymerase I [Alcanivorax borkumensis SK2]
gi|110648631|emb|CAL18107.1| DNA polymerase I [Alcanivorax borkumensis SK2]
Length = 956
Score = 231 bits (588), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 196/699 (28%), Positives = 314/699 (44%), Gaps = 110/699 (15%)
Query: 1485 NKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVY 1544
N+ + + + D +LD+ +A EF FD + N+ E+ G AV + Y
Sbjct: 354 NRDAYDIVYSEAMLDKWLDKLKAAGEFAFDTETTSLNYMNA----ELVGFAVAVSDKAAY 409
Query: 1545 YV---NLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKF 1601
N P G+ D + +++ ++K ++E ++K
Sbjct: 410 IPFGHNYP----------------GAPD------QIDKQLVIDKFK---PLLEDDSLKKI 444
Query: 1602 TWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWI 1661
N+K + VL A G+ L G + D + S++
Sbjct: 445 GQNLKYDMSVLAEDA-------GITLRGVAF---------------------DTMLESYV 476
Query: 1662 LWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNGCCRRVAQT 1715
L D ++ +++ K L + + + +G+ Q+ A T
Sbjct: 477 L---DSVATRHDMDSLALKYLGRKTISFTDIAGKGAKQLTFNQIGLHEASPYAAEDADVT 533
Query: 1716 RALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
L LW KL + L E +IE+PLV VL+ +E G VD L K++
Sbjct: 534 LRLHQTLWPKLEAEDRLPEVFRDIELPLVTVLSRIERNGTYVDATLLKHQSQFLAKRMAE 593
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
L++KA+ +AG +F+L + + +LY L++P+ + KG PST + L L H++P+
Sbjct: 594 LQEKAFDIAGQEFNLASPKQLGEILYEKLEIPVIKKTPKGA--PSTAEAVLQELAHDYPL 651
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
VI ++R +AKL N + L I+ T + +H + Q TATGRLS +PNLQ +
Sbjct: 652 PQVIMDYRGVAKLKNTYTDKLPEL--INQRTGR--VHTSYHQAVTATGRLSSSDPNLQNI 707
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
E + KI + F P + ++A DYSQIELR+MAH S D
Sbjct: 708 PVRSE---------------EGRKIR-QAFLAPKGKK--IVACDYSQIELRIMAHLSGDK 749
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L + D+ AA G++ D V +R K + +G++YGM L++QL
Sbjct: 750 GLTDAFEQGL-DIHRATAAEVWGKTLDEVSDNDRRNAKAINFGLIYGMSAFGLAKQLGLP 808
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
EA+E I + +PGV ++ + KGYVE++ GR+ +L +I N + + A+
Sbjct: 809 RKEAQEYIDLYFERYPGVKKYMEDTRALAIDKGYVETVYGRRLYLPEIHSKNGQRRQGAE 868
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
R A+N+ QG+AADIIK AMI +H D +F ++++QVHDELV
Sbjct: 869 RAAINAPMQGTAADIIKKAMIKVH----------DWLETTHFD-----AKMIMQVHDELV 913
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
EV + + V V+ MESAA L VPL+V G W
Sbjct: 914 FEVADDQVDDLVKEVKARMESAAELKVPLIVDAGAGENW 952
>gi|443477513|ref|ZP_21067355.1| DNA polymerase I [Pseudanabaena biceps PCC 7429]
gi|443017354|gb|ELS31815.1| DNA polymerase I [Pseudanabaena biceps PCC 7429]
Length = 948
Score = 231 bits (588), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 232/450 (51%), Gaps = 42/450 (9%)
Query: 1724 KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLA 1783
KL +L + N+E+PL +LA+ME GI +D E L+K L L KAY A
Sbjct: 537 KLKTVPQLWDLFQNLEMPLEPILAEMEWRGIRIDKEYLGVFSQELEKDLDALAIKAYAEA 596
Query: 1784 GMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRT 1843
G +F+L + ++ +L L + K K STD L+ L HP++ I E+RT
Sbjct: 597 GQEFNLNSPKQLSEILVELLGDTFTKKSRKSKTGYSTDVAVLNKLEGAHPLIDTILENRT 656
Query: 1844 LAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMS 1903
LAKL + + ++ SL + + +H + QT TATGRLS PNLQ + F
Sbjct: 657 LAKLKSTYVDALPSL----IQPKTGRVHTDFNQTVTATGRLSSSNPNLQNIPIRTAF--- 709
Query: 1904 NEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKP 1963
++ I G F+P +E+WILLAADYSQIELR++AH S++P L+ +
Sbjct: 710 SKRIRAG--------------FLP-KEDWILLAADYSQIELRILAHLSQEPELMRAFNAG 754
Query: 1964 HGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIK 2023
DV T+ A + E V S+ER K + YG++YGMG S + S AK+ I+
Sbjct: 755 E-DVHTVTAQLLLEKEE--VNSEERRLAKIINYGVIYGMGAQKFSRDIGVSVKIAKQFIE 811
Query: 2024 SFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQ 2083
F + + +++ + GYV+++ GR+R+ +K +K+ R AVN+ Q
Sbjct: 812 KFNQRYERIFTYMQSVEVEAERDGYVKTVLGRRRYFRNLKDMGGYQKAALLRSAVNAPIQ 871
Query: 2084 GSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIK 2143
G++ADI+K+AM+ +H I+ ++Q RLLLQVHDELV EV P +
Sbjct: 872 GTSADIVKLAMLRVHEIL------------KDYQ-----ARLLLQVHDELVFEVPPDEVA 914
Query: 2144 EAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E ++ MESA L V L V I G W
Sbjct: 915 ELQPQIKTAMESALELSVKLEVDIHTGKNW 944
>gi|387930085|ref|ZP_10132762.1| DNA polymerase I [Bacillus methanolicus PB1]
gi|387586903|gb|EIJ79227.1| DNA polymerase I [Bacillus methanolicus PB1]
Length = 877
Score = 230 bits (587), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 256/530 (48%), Gaps = 45/530 (8%)
Query: 1647 VHLKD-GIDMCIVSWILWPDDERSSNPNLEKEVK--KRLSSEAAAAANRSGRWKNQMRRA 1703
+HLK D + S+I+ P + ++ K K S EA + + + A
Sbjct: 386 IHLKGVEFDFLLASYIINPSESIDDIASIAKRNKFASVQSDEAFYGKGAKRKIPEEEKLA 445
Query: 1704 AHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQ 1763
H R+ A AL L L + E +E+PL +LADME G+ +D+
Sbjct: 446 EH--LVRKAAAMDALKEKLELELKENKQYELFNELEMPLSLILADMEYQGVKIDINRLRD 503
Query: 1764 ARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKH 1823
+ + ++L+ +E K Y LAG KF++ + + +L+ L LP+ K K ST
Sbjct: 504 MGHEINEQLKEIENKIYDLAGEKFNINSPKQLGVILFEKLGLPV---MKKTKTGYSTSAD 560
Query: 1824 CLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGR 1883
L+ L EH IV I +R L KL + + + + + T K +H + Q T TGR
Sbjct: 561 VLEKLEQEHEIVREILHYRQLGKLQSTYIEGLLKV--VDPKTDK--VHTRFNQALTQTGR 616
Query: 1884 LSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIE 1943
LS +PNLQ + +E + KI R FIPS+++W++ AADYSQIE
Sbjct: 617 LSSTDPNLQNIPIRLE---------------EGRKI--RQAFIPSEKDWVIFAADYSQIE 659
Query: 1944 LRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMG 2003
LR++AH + D LI K D+ T A +D V S R K + +GI+YG+
Sbjct: 660 LRVLAHIANDEKLIQAF-KEDLDIHTKTAMEVFHVEKDEVTSNMRRHAKAVNFGIVYGIS 718
Query: 2004 PNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIK 2063
LS+ L + EA + I+ + S+PGV ++ V Q GYV ++ R+R+L +I
Sbjct: 719 DYGLSQSLGITRKEAAKFIERYLESYPGVKEYMEEIVKEAKQIGYVSTILHRRRYLPEIT 778
Query: 2064 FGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRC 2123
N +S A+R A+N+ QGSAADIIK AMI+ +A + +
Sbjct: 779 SRNYNVRSFAERTAMNTPIQGSAADIIKKAMID---------------MAERLKAEGLKT 823
Query: 2124 RLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
RLLLQVHDEL+ E I++ +V ME+A L VPL V G TW
Sbjct: 824 RLLLQVHDELIFEAPKDEIEKLTEIVPDVMENAVELKVPLKVDYSFGPTW 873
>gi|197286655|ref|YP_002152527.1| DNA polymerase I [Proteus mirabilis HI4320]
gi|194684142|emb|CAR45571.1| DNA polymerase I [Proteus mirabilis HI4320]
Length = 932
Score = 230 bits (587), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 146/437 (33%), Positives = 238/437 (54%), Gaps = 39/437 (8%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+PLV VL+ ME G+ +D + + ++L +EK+ + LAG +F+L + +
Sbjct: 531 DIEMPLVPVLSRMERKGVLIDAQVLAMQSQEITQRLAEIEKETFALAGQEFNLSSPKQLQ 590
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L+ L LPI + KG PST++ L+ L H H + +I EHR LAKL + +
Sbjct: 591 EILFEKLNLPIIKKTPKGA--PSTNEEVLEALAHSHELPRLILEHRGLAKLKSTYTDKLP 648
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
+ ++++ +H + Q TATGRLS +PNLQ + + NE+ G
Sbjct: 649 ----LMVNSKTKRVHTSYHQAVTATGRLSSRDPNLQNI------PVRNEE---GR----- 690
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R FI +++ + ++AADYSQIELR+MAH S+D L+ ++ D+ A+
Sbjct: 691 ---RIRQAFI-ARDGFKIVAADYSQIELRIMAHLSQDKGLLDAFAQ-GKDIHRATASEVF 745
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G D V S++R K + +G++YGM LS+Q+ EA+ + + +PGV ++
Sbjct: 746 GIPLDEVTSEQRRSAKAINFGLIYGMSAFGLSQQIGVERKEAQRYMDLYFERYPGVLDYM 805
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
Q+GYVE+L GR+ +L +I N + ++R+A+N+ QG+AADIIK AMI
Sbjct: 806 ERTRKQASQQGYVETLDGRRLYLPEINSKNAIRRKASEREAINAPMQGTAADIIKKAMIA 865
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
+ + I PD +++QVHDELV EV S +++A +++ K MES+
Sbjct: 866 VDNWICHEC--PDD------------VHMIMQVHDELVFEVRESYLEKANAMIHKLMESS 911
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +PL V++ VG+ W
Sbjct: 912 MELAIPLKVEVGVGNNW 928
>gi|390946767|ref|YP_006410527.1| DNA polymerase I [Alistipes finegoldii DSM 17242]
gi|390423336|gb|AFL77842.1| DNA polymerase I [Alistipes finegoldii DSM 17242]
Length = 956
Score = 230 bits (587), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 234/440 (53%), Gaps = 41/440 (9%)
Query: 1736 LNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG-MKFSLYTAAD 1794
IE P++ VLAD+E+ G+ +D E L ++L LE AG + ++ +A
Sbjct: 552 FEIEEPMIAVLADIEMAGVRIDSEALAVYSVELSRRLAELEAAIREEAGESQLNINSARQ 611
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ VL+G +++ K KQ TD+ L H+H IV +I E+R + KLL+ + +
Sbjct: 612 LGEVLFGKMRIAEKPKMTKTKQF-CTDEDYLQSFAHKHRIVDLILEYRGVKKLLSTYVEA 670
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ L ++ + +H + Q TATGRLS PNLQ + V +M
Sbjct: 671 LPQL----VNRRTGRIHTSFNQAVTATGRLSSTNPNLQNIP--VREEMGR---------- 714
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAA 1973
R FIPS E +LL+ADYSQ+ELRLMAH S D +LI + HG D+ AA
Sbjct: 715 -----RIRRAFIPSDEEHLLLSADYSQVELRLMAHLSGDESLIAAFA--HGEDIHAATAA 767
Query: 1974 RWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVA 2033
+ ++ V S+ER + K +GI+YG+ LS++L EAKE I + +S+P V
Sbjct: 768 KLFNKTLGEVTSEERRRAKTANFGIIYGISAFGLSQRLEIPRKEAKEIIDGYFASYPKVQ 827
Query: 2034 SWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIA 2093
++ V+ ++G+V ++ GR+R+L+ I N + A+R AVN+ QGSAADI+KIA
Sbjct: 828 EYMDNVVAKAKEEGFVSTIFGRRRYLNDIASHNAIARGLAERNAVNAPIQGSAADIMKIA 887
Query: 2094 MINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCM 2153
MIN+H F R +++LQVHDELV+++ S + V++V + M
Sbjct: 888 MINVHR---------------RFAAEGIRSKVILQVHDELVVDMLRSEQERVVAIVTEAM 932
Query: 2154 ESAALLLVPLLVKIQVGSTW 2173
ESAA L V L+V VG W
Sbjct: 933 ESAAALKVRLVVDYGVGGNW 952
>gi|392390036|ref|YP_006426639.1| DNA polymerase I [Ornithobacterium rhinotracheale DSM 15997]
gi|390521114|gb|AFL96845.1| DNA polymerase I [Ornithobacterium rhinotracheale DSM 15997]
Length = 931
Score = 230 bits (587), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 231/442 (52%), Gaps = 39/442 (8%)
Query: 1733 EALLN-IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYT 1791
E L N +E+PLV VLADME GI +D+ + L + LEK+ + AG +F+L +
Sbjct: 524 EKLFNEVEMPLVKVLADMEKEGIALDVPALAEISKELDSDMTELEKQIFEYAGEEFNLNS 583
Query: 1792 AADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCT 1851
+ +L+ ++L K Q+ ST + L L +HPI+ I E+R L KL +
Sbjct: 584 PKQLGEILFEKMELVKKPKKTKTGQY-STSEDVLSKLSDKHPIIEQILEYRQLQKLKSTY 642
Query: 1852 LGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGN 1911
+ S+ +S T + +H + QT ATGRL+ PNLQ + + E
Sbjct: 643 VDSLPQ--EVSPITGR--VHTSFAQTVAATGRLASNNPNLQNIP--IRTPRGQE------ 690
Query: 1912 AEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMI 1971
R FI E +L+AADYSQIELRL+A S+DP ++ + D+
Sbjct: 691 ---------VRKAFIAKDEQHVLIAADYSQIELRLIAGLSQDPTMMASFNNGE-DIHAAT 740
Query: 1972 AARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPG 2031
A++ G + V ++R K + +GI+YG+ LSEQ + S E+K+ I ++ ++P
Sbjct: 741 ASKVFGVPLNEVTREQRSHAKTVNFGIIYGVSAFGLSEQTSLSRGESKDLIDAYFETYPQ 800
Query: 2032 VASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIK 2091
+ ++ ++ ++GYVE++ GR+R+L I N KS A+R AVN+ QGSAADIIK
Sbjct: 801 LQKYIQDQIALARKQGYVETILGRRRYLRDINSNNYVVKSHAERNAVNAPVQGSAADIIK 860
Query: 2092 IAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQK 2151
+ M+ IH + NFQ ++LLQVHDELV E S +++ +L++
Sbjct: 861 LGMVKIHQRLK----------EENFQ-----TKMLLQVHDELVFEAPKSEVEQVSALIKD 905
Query: 2152 CMESAALLLVPLLVKIQVGSTW 2173
ME A VPL+V+ VG W
Sbjct: 906 TMEHAIAFNVPLVVECGVGKNW 927
>gi|218258588|ref|ZP_03474931.1| hypothetical protein PRABACTJOHN_00586 [Parabacteroides johnsonii DSM
18315]
gi|218225358|gb|EEC98008.1| hypothetical protein PRABACTJOHN_00586 [Parabacteroides johnsonii DSM
18315]
Length = 940
Score = 230 bits (587), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 234/448 (52%), Gaps = 39/448 (8%)
Query: 1727 VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
+ +E +E+L +IE+PL+ VLA+ME G+ +D Q+ L L+ LEK+ Y LAG+
Sbjct: 527 LDKEGLESLFYDIEMPLIYVLAEMEYTGVTLDTIALKQSSEELTTALKKLEKEIYELAGI 586
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLA 1845
KF++ +A + VL+ HLK+ K + ST + L+ +R +HP+V + E+R L
Sbjct: 587 KFNINSARQVGEVLFDHLKIEEKAKKTKTGSY-STSEEILEKMRSKHPVVEKLLEYRGLK 645
Query: 1846 KLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNE 1905
KLL+ + ++ L I+ T K +H + Q T+TGRLS PNLQ +
Sbjct: 646 KLLSTYIDALPEL--INPETGK--IHTSYNQAVTSTGRLSSTNPNLQNIPVR-------- 693
Query: 1906 DIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG 1965
D R F E+ I +ADYSQIELR+MAH S+D +I +
Sbjct: 694 ---------DELGREIRKAFTAENEDCIFFSADYSQIELRIMAHLSQDAHMIEAF-RSGA 743
Query: 1966 DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSF 2025
D+ AA+ G + V S R + K +GI+YG+ L+E+LN E+KE I+ +
Sbjct: 744 DIHAATAAKIYGIPVEEVTSDMRRKAKTANFGIIYGISVFGLAERLNIPRAESKELIEGY 803
Query: 2026 KSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGS 2085
++P + +++ ++ +KGYVE++ RKRFL I N + A+R A+N+ QGS
Sbjct: 804 FKTYPDIRAYMDESIEVAKEKGYVETIYKRKRFLPDINSHNAIVRGYAERNAINAPIQGS 863
Query: 2086 AADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEA 2145
AADIIK+AM+ I + F+ + +++LQVHDEL V +++
Sbjct: 864 AADIIKVAMVRIFN---------------RFETEGLKSKMILQVHDELNFNVYKDEMEKV 908
Query: 2146 VSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+V ME+A L VPL+ G W
Sbjct: 909 KQIVLDEMENAIQLQVPLIADCGEGVNW 936
>gi|153938977|ref|YP_001392289.1| DNA polymerase I [Clostridium botulinum F str. Langeland]
gi|384463265|ref|YP_005675860.1| DNA polymerase I [Clostridium botulinum F str. 230613]
gi|152934873|gb|ABS40371.1| DNA polymerase I [Clostridium botulinum F str. Langeland]
gi|295320282|gb|ADG00660.1| DNA polymerase I [Clostridium botulinum F str. 230613]
Length = 875
Score = 230 bits (587), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 242/456 (53%), Gaps = 41/456 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L VL + + +++ E L +E PL L+ ME G VD + LQ + ++ +
Sbjct: 457 LYKVLEEKIKEQDMEELLYKVEQPLTETLSAMETEGFKVDKDILLQLEKKFKGEIESTQL 516
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ Y+++ +F++ + + +L+ L LP+ + K K ST+ LD LR +HPI+
Sbjct: 517 EIYSMSEEEFNINSPKQLGKILFEKLDLPVIK---KTKTGYSTNAEVLDKLRDKHPIIDK 573
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I +R L K+ + + + + + +H ++ QT TATGRLS EPNLQ +
Sbjct: 574 ITYYRQLTKIYSTYIEGLKAAI-----DEDGKIHSNFNQTVTATGRLSSTEPNLQNIP-- 626
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
++++M E R FIP+ + ++L+ADYSQIELR++AH S D +I
Sbjct: 627 IKYEMGRE---------------IRKVFIPNTGDSVILSADYSQIELRVLAHISDDKNMI 671
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
++ H D+ T A+ + V R K + +GI+YG+G +LS+ LN + E
Sbjct: 672 SAFNE-HDDIHTKTASEVFKVPIEEVTPLMRSNAKAVNFGIVYGIGDFSLSQDLNITRKE 730
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
AK+ I ++ +P V +L V +KGYV ++ R+R++ ++K N K+ +R A
Sbjct: 731 AKQYIDAYLERYPNVKLYLENIVEEAVEKGYVSTILNRRRYIKEVKSSNKIVKAAGERLA 790
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+NS QGSAADIIK+AM+N+H + K D NF + ++LQVHDEL+L V
Sbjct: 791 MNSPIQGSAADIIKLAMVNVHRKL-----KED-----NF-----KSSIILQVHDELILNV 835
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++ +LV+K ME L V L V I +G+ W
Sbjct: 836 HKDELEKIKALVKKEMEQVLELKVGLDVDINIGNNW 871
>gi|423342500|ref|ZP_17320214.1| DNA polymerase I [Parabacteroides johnsonii CL02T12C29]
gi|409217417|gb|EKN10393.1| DNA polymerase I [Parabacteroides johnsonii CL02T12C29]
Length = 940
Score = 230 bits (587), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 234/448 (52%), Gaps = 39/448 (8%)
Query: 1727 VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
+ +E +E+L +IE+PL+ VLA+ME G+ +D Q+ L L+ LEK+ Y LAG+
Sbjct: 527 LDKEGLESLFYDIEMPLIYVLAEMEYTGVTLDTIALKQSSEELTTALKKLEKEIYELAGI 586
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLA 1845
KF++ +A + VL+ HLK+ K + ST + L+ +R +HP+V + E+R L
Sbjct: 587 KFNINSARQVGEVLFDHLKIEEKAKKTKTGSY-STSEEILEKMRSKHPVVEKLLEYRGLK 645
Query: 1846 KLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNE 1905
KLL+ + ++ L I+ T K +H + Q T+TGRLS PNLQ +
Sbjct: 646 KLLSTYIDALPEL--INPETGK--IHTSYNQAVTSTGRLSSTNPNLQNIPVR-------- 693
Query: 1906 DIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG 1965
D R F E+ I +ADYSQIELR+MAH S+D +I +
Sbjct: 694 ---------DELGREIRKAFTAENEDCIFFSADYSQIELRIMAHLSQDAHMIEAF-RSGA 743
Query: 1966 DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSF 2025
D+ AA+ G + V S R + K +GI+YG+ L+E+LN E+KE I+ +
Sbjct: 744 DIHAATAAKIYGIPVEEVTSDMRRKAKTANFGIIYGISVFGLAERLNIPRAESKELIEGY 803
Query: 2026 KSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGS 2085
++P + +++ ++ +KGYVE++ RKRFL I N + A+R A+N+ QGS
Sbjct: 804 FKTYPDIRAYMDESIEVAKEKGYVETIYKRKRFLPDINSHNAIVRGYAERNAINAPIQGS 863
Query: 2086 AADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEA 2145
AADIIK+AM+ I + F+ + +++LQVHDEL V +++
Sbjct: 864 AADIIKVAMVRIFN---------------RFETEGLKSKMILQVHDELNFNVYKDEMEKV 908
Query: 2146 VSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+V ME+A L VPL+ G W
Sbjct: 909 KQIVLDEMENAIQLQVPLIADCGEGVNW 936
>gi|406983366|gb|EKE04576.1| hypothetical protein ACD_20C00047G0006 [uncultured bacterium]
Length = 961
Score = 230 bits (587), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 189/696 (27%), Positives = 324/696 (46%), Gaps = 98/696 (14%)
Query: 1490 NAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLP 1549
N I+ D ++ + F FD + + + E+ GL+ W+ P ++
Sbjct: 349 NLIDTEEALDNLINNLQQMQVFSFDTE----TTGVNALTAELVGLSFAWD--PQVKISEK 402
Query: 1550 K---DLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMK 1606
K D + + ++ G ++ L+ ++ L+ +K ++E ++ K N K
Sbjct: 403 KIHIDETAIGPVEAAYIPVGHTEGKQLSIQYVLDKLKP-------VLEDNNLYKLLQNAK 455
Query: 1607 VQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDD 1666
+I +LK+ +++Q F D I S+I P
Sbjct: 456 YEINLLKNYNINLQGFI-----------------------------FDTMIASYIKNP-- 484
Query: 1667 ERSSNPNLEKEVKKRLSSEAAAAANRSGRWKN-------QMRRAAHNGCCRRVAQTRALC 1719
+ NL+ + L E + + G+ K Q+ A C A
Sbjct: 485 --TYKHNLKHQALAYLKYEMQSIDDLIGKGKTATTMDKIQIPEVAKYACDDAWATLE--L 540
Query: 1720 SVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKA 1779
S + + ++ I L +IEI L+ VLADME G+ +D + + + + + +E +
Sbjct: 541 SKFYSKNIEKDQIRVLYDIEITLIPVLADMERNGVSLDTDYLKKLSDEICLNITRVESQI 600
Query: 1780 YTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIK 1839
+ AG +F++ + + ++++ L L G K K ST L+ L EHPI+P++
Sbjct: 601 FEYAGERFNINSPKQVGDIIFEKLNLS-KRGKTKTKTGYSTSAKVLESLTLEHPIIPLLL 659
Query: 1840 EHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVE 1899
E+R L KL + + ++ L I+ T + +H + QT T TGRLS PNLQ + E
Sbjct: 660 EYRHLTKLKSTYIDALPEL--INPKTGR--IHTSFNQTITTTGRLSSSNPNLQNIPIKSE 715
Query: 1900 FKMSNEDIYGGNAEVDHCKINARDFFIP-SQENWILLAADYSQIELRLMAHFSKDPALIG 1958
GN KI A F+P +EN+++ +ADYSQ+ELRL+AHFSKDPAL+
Sbjct: 716 L---------GN------KIRAA--FVPKDKENYVIFSADYSQVELRLLAHFSKDPALLD 758
Query: 1959 LLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEA 2018
+ DV A++ G S D V R + K + +GI+YG L+E L + EA
Sbjct: 759 AFCN-NKDVHADTASKVFGVSLDQVTKDMRRKAKAVNFGIIYGQSSYGLAESLGITPGEA 817
Query: 2019 KEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLS-KIKFGNNKEKSKAQRQA 2077
K I + ++P + +++ ++ + KGYV ++ GRKR+L+ ++ N + +R A
Sbjct: 818 KGIIDKYFQTYPKIKAYMDKTIAEAYSKGYVTTMFGRKRYLADELNSRNRSIREFGERAA 877
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+N+ QG++AD+IK+AMI +H + ++ +++LQVHDELVLEV
Sbjct: 878 INAPLQGTSADLIKLAMIGLHQELKTSGFE---------------SKIILQVHDELVLEV 922
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+ +V+ CME L VPL+V + G +W
Sbjct: 923 PKKELTIVGDIVKDCMELGQPLSVPLVVDMASGPSW 958
>gi|358410693|gb|AEU10079.1| DNA polymerase I [Photobacterium damselae subsp. piscicida]
Length = 923
Score = 230 bits (587), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 244/452 (53%), Gaps = 43/452 (9%)
Query: 1724 KLLVSEELIEALLNIEIPLVNVLADMELWGIGVD-MEGCLQARNLLQKKLRYLEKKAYTL 1782
K+ E+L+ +IE+PLV VL+ ME G+ +D M+ Q++ + Q+ L LEK+A+ +
Sbjct: 509 KVSADEKLLHVFSDIEMPLVPVLSRMERTGVLIDSMKLSAQSQEIAQR-LDELEKRAFEI 567
Query: 1783 AGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHR 1842
A +F+L + + +L+ + LP+ + G PST++ L L ++P+ +I E+R
Sbjct: 568 ADQEFNLSSPKQLQAILFEKMGLPVLKKTPSGT--PSTNEEVLQELALDYPLPKLILEYR 625
Query: 1843 TLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM 1902
LAKL + + + ++ +T + +H + Q TATGRLS +PNLQ + +
Sbjct: 626 GLAKLKSTYTDKLPKM--VNPATGR--VHTSYHQAVTATGRLSSSDPNLQNI------PV 675
Query: 1903 SNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSK 1962
N++ G R FI Q + +LA DYSQIELR+MAH S D AL+
Sbjct: 676 RNDE---GR--------RIRQAFIAPQ-GYKVLAIDYSQIELRIMAHLSGDKALLDAFC- 722
Query: 1963 PHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEK 2021
HG D+ AA G + V S++R + K + +G++YGM L++QL+ EA+E
Sbjct: 723 -HGKDIHAATAAEILGLPLEQVSSEQRRRAKAINFGLIYGMSAFGLAKQLDMGRGEAQEY 781
Query: 2022 IKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSI 2081
+ ++ +PGV ++ + ++GYV++L GR+ +L IK N + A+R A+N+
Sbjct: 782 MNTYFERYPGVLEYMETTRTVASEQGYVDTLFGRRLYLPDIKSRNGLRRKAAERAAINAP 841
Query: 2082 CQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSV 2141
QG+AADIIK AM+ + I Q GR RLL+QVHDELV EV S
Sbjct: 842 MQGTAADIIKRAMVLVDEWI--------------GQQESGRVRLLMQVHDELVFEVQESE 887
Query: 2142 IKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
I+ ++ MESAA L VPL+ I G W
Sbjct: 888 IESVAQEIKTLMESAAQLDVPLIADIGYGENW 919
>gi|418637636|ref|ZP_13199953.1| DNA-directed DNA polymerase [Staphylococcus lugdunensis VCU139]
gi|374838467|gb|EHS02010.1| DNA-directed DNA polymerase [Staphylococcus lugdunensis VCU139]
Length = 877
Score = 230 bits (587), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 239/454 (52%), Gaps = 43/454 (9%)
Query: 1721 VLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAY 1780
++ +L ++ L N+E+PL +LADME GI D+ + +N LQ+KL L + Y
Sbjct: 462 LMSDILSDHNQMDLLNNLELPLARILADMEETGIYTDVNDLKEMQNELQEKLDNLVSEIY 521
Query: 1781 TLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKE 1840
AG F++ + + VL+ LKLPI + K K ST L+ L+ +HPI+ I E
Sbjct: 522 EAAGESFNINSPKQLGIVLFETLKLPIIK---KTKTGYSTAVDVLEQLQGKHPIIDYILE 578
Query: 1841 HRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEF 1900
+R L+KL + + L ++ Q+ +H + QT TGRLS +PNLQ + +E
Sbjct: 579 YRQLSKLQSTY---VEGLQKVISDDQR--IHTRFNQTLAQTGRLSSIDPNLQNIPIRLE- 632
Query: 1901 KMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLL 1960
+ KI R F P+ +++++L+ADYSQIELR++AH ++D +L
Sbjct: 633 --------------EGRKI--RKAFKPTSDDYVILSADYSQIELRVLAHMTQDESLKEAF 676
Query: 1961 SKPHGD-VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAK 2019
HGD + A + G ++ V R Q K + +GI+YG+ LS+ L + +AK
Sbjct: 677 --IHGDDIHAATAMKVFGVEKNQVNDLMRRQAKAVNFGIVYGISDYGLSQNLGITRKKAK 734
Query: 2020 EKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVN 2079
I + +SFPGV ++ V GYVE+L R+R++ I N +S A+R A+N
Sbjct: 735 AFIDDYLASFPGVKQYMTDIVKDAKANGYVETLLHRRRYIPDITSRNFNLRSFAERTAMN 794
Query: 2080 SICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDP 2139
+ QGSAADIIK+AM+ N + +LLLQVHDEL+ EV
Sbjct: 795 TPIQGSAADIIKLAMV---------------QFDKNVRETNYHAKLLLQVHDELIFEVPK 839
Query: 2140 SVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
S +++ V++ M++A L VPLLV G+TW
Sbjct: 840 SEVQDFSEFVEEIMDNALTLAVPLLVDSSYGATW 873
>gi|408375632|ref|ZP_11173293.1| DNA polymerase I [Alcanivorax hongdengensis A-11-3]
gi|407764508|gb|EKF72984.1| DNA polymerase I [Alcanivorax hongdengensis A-11-3]
Length = 920
Score = 230 bits (587), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 193/687 (28%), Positives = 319/687 (46%), Gaps = 112/687 (16%)
Query: 1498 FDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYV---NLPKDLWS 1554
D +LD+ +A EF FD + ++ ++ G++V ++ Y N P
Sbjct: 331 LDKWLDKLKAAGEFAFDTETTSLNYMDA----QLVGVSVAVDDKAAYIPFSHNYP----- 381
Query: 1555 DHRRKDRFLIYGSSDKNVLTPEHQLEMIKQR-WKRIGEIMEKRDVRKFTWNMKVQIQVLK 1613
G+ D ++ KQR ++ ++E +++K N+K + VL
Sbjct: 382 -----------GAPD----------QLPKQRVMDKLKPLLEDDNIKKIGQNLKYDMSVLA 420
Query: 1614 HAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPN 1673
G+ L G + D + S++L D ++ +
Sbjct: 421 EDV-------GITLRGVAY---------------------DTMLESYVL---DSVATRHD 449
Query: 1674 LEKEVKKRLSSEAAAAANRSGRWKNQM--RRAAHNGCCRRVAQ----TRALCSVLWKLLV 1727
++ K L + + +G+ Q+ + + R A+ T L LW L
Sbjct: 450 MDSLALKYLGRKTISFEEIAGKGAKQLTFNQVGLHEASRYAAEDADVTLRLHQTLWPKLE 509
Query: 1728 SE-ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMK 1786
E L + +IE+PLV VL+ +E G VD L K++ L++KA+ +AG +
Sbjct: 510 KEGRLPDVFRDIELPLVTVLSRIERNGTYVDATLLKHQSQFLAKRMAELQEKAFEIAGQE 569
Query: 1787 FSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAK 1846
F+L + + +LY L++P+ + KG PST + L L E+P+ VI ++R +AK
Sbjct: 570 FNLASPKQLGEILYEKLEIPVIKKTPKGA--PSTAEPVLQELALEYPLPQVIMDYRGVAK 627
Query: 1847 LLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNED 1906
L N + L I+ T + +H + Q ATGRLS +PNLQ + E
Sbjct: 628 LKNTYTDKLPEL--INQRTGR--VHTSYHQAVAATGRLSSSDPNLQNIPVRSE------- 676
Query: 1907 IYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
+ KI + F P + ++A DYSQIELR+MAH S D L K D
Sbjct: 677 --------EGRKIR-QAFLAPKGKK--IVACDYSQIELRIMAHLSGDKGLTDAFEKGL-D 724
Query: 1967 VFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFK 2026
+ AA G+S D V +R K + +G++YGM L++QL EA++ I +
Sbjct: 725 IHRATAAEVWGKSLDDVSDNDRRNAKAINFGLIYGMSAFGLAKQLGLPRKEAQDYIDLYF 784
Query: 2027 SSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSA 2086
+PGV ++ + ++GYVE+L GR+ +L +I+ N + + A+R A+N+ QG+A
Sbjct: 785 ERYPGVKRYMEETRAQASEQGYVETLFGRRLYLPEIRSSNGQRRQAAERTAINAPMQGTA 844
Query: 2087 ADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAV 2146
ADIIK+AMI +H + D++ +F ++++QVHDELV EV +++ V
Sbjct: 845 ADIIKMAMIKVHDWL-------DTT---HFD-----AKMIMQVHDELVFEVAEGQVEDLV 889
Query: 2147 SLVQKCMESAALLLVPLLVKIQVGSTW 2173
V+ MESAA L VPL+V +G W
Sbjct: 890 KEVKVRMESAAELKVPLIVDAGIGENW 916
>gi|406886019|gb|EKD33118.1| hypothetical protein ACD_76C00092G0001 [uncultured bacterium]
Length = 847
Score = 230 bits (587), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 151/455 (33%), Positives = 233/455 (51%), Gaps = 48/455 (10%)
Query: 1723 WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTL 1782
WKL IE+PLV +L ME G +D + + +L LEK+ + L
Sbjct: 439 WKLFC---------EIEMPLVPILRQMENNGAMIDSAFLAKLSKEFEIELSKLEKQIHKL 489
Query: 1783 AGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHR 1842
A F++ + +A +L+ L++P +G K K ST L+ +R+EH IVP I EHR
Sbjct: 490 ADSDFNIASPLQLAEILFEKLQIPT-KGLKKTKTGVSTAAPELEKIRNEHKIVPFIFEHR 548
Query: 1843 TLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM 1902
L+KL + + ++ +LA S +H + QT TATGRLS +PNLQ + E
Sbjct: 549 ELSKLKSTYVDALPALADSSGR-----VHTTYNQTITATGRLSSSDPNLQNIPIRTEL-- 601
Query: 1903 SNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSK 1962
E+ R FI + + LLA DYSQIELRL A S+D ++ K
Sbjct: 602 --------GREI-------RKAFI-APKGKTLLALDYSQIELRLAAVISRDQGMLNAFHK 645
Query: 1963 PHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKI 2022
D+ T AA D V ++R K + +GILYGMGP L++ S EA++ I
Sbjct: 646 -GADIHTATAASIWETDPDKVTREQRRSAKAINFGILYGMGPRALAQSAGVSMEEARDFI 704
Query: 2023 KSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSIC 2082
+ + + PG+ +++ H G+V++L GR+R+ +I G + + A+R A+N
Sbjct: 705 EKYFEAHPGIRAYIDSTKKQAHSDGFVQTLFGRRRYFPEINSGLQQLIASAERMAINMPV 764
Query: 2083 QGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVI 2142
QGSAADI+K+AMI + ++ D +L G ++++QVHDELV E D +
Sbjct: 765 QGSAADIMKMAMIAVDHLL------QDQNL--------GEIKMIMQVHDELVFEADEKIA 810
Query: 2143 KEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
+A +++ MES A +P +V + +G WG +E
Sbjct: 811 AKAADEIKRIMESVAKFEIPFIVDVSIGKNWGEME 845
>gi|291550064|emb|CBL26326.1| DNA polymerase I [Ruminococcus torques L2-14]
Length = 871
Score = 230 bits (586), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 178/565 (31%), Positives = 273/565 (48%), Gaps = 73/565 (12%)
Query: 1612 LKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSN 1671
L H A S++RF ++ G LE L + ++G D + +++L P +
Sbjct: 373 LSHLAKSVKRF---SMCGLKEYLE-------WLPELTSENGFDAIVAAYLLNPLKNDYNA 422
Query: 1672 PNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEEL 1731
++ +E L E +S C A VL K L +
Sbjct: 423 EDVAREHLNLLIDEKLDEGTKS---------------CYEAYTAYACVPVLEKKLEENGM 467
Query: 1732 IEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYT 1791
IE+PLV L DME G+ V+ E + L ++ LEK+ Y +AG +F++ +
Sbjct: 468 FCLFNEIEMPLVFTLYDMEQAGVKVEGEELKRYGEELGARIVELEKEIYEMAGEEFNINS 527
Query: 1792 AADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCT 1851
+ +L+ L++P K K ST LD L E+PIV I E+R LAKL +
Sbjct: 528 PKQLGVILFEKLEMP---HAKKTKTGYSTAADVLDKLAPEYPIVAKILEYRQLAKLKSTY 584
Query: 1852 LGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGN 1911
+ + I M + +H + QT TATGR+S EPNLQ + +E
Sbjct: 585 ADGLANY--IGMDGR---IHSKFNQTITATGRISSTEPNLQNIPVRMELGRL-------- 631
Query: 1912 AEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMI 1971
R F+P +E + + ADYSQIELR++AH S D LI + D+ M
Sbjct: 632 ---------IRKVFVP-KEGCVFVDADYSQIELRILAHCSGDEQLIQAYREAR-DIHRMT 680
Query: 1972 AARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPG 2031
A++ D V +R K + +GI+YG+ LS+ L+ S EA + I+ + S+PG
Sbjct: 681 ASQVFHVPFDEVTDLQRRNAKAVNFGIVYGISSFGLSQDLSISRKEAAQYIEHYFESYPG 740
Query: 2032 VASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIK 2091
+ ++L VS +KGY E+L GR+R + ++K N ++S +R A+N+ QG+AADIIK
Sbjct: 741 IKTFLDKCVSDAKEKGYAETLYGRRRPMPELKSSNFMQRSFGERVAMNAPIQGTAADIIK 800
Query: 2092 IAMINIHSIIVGGVYKPDSSLAANFQMLKGR---CRLLLQVHDELVLEVDPSVIKEAVSL 2148
IAMI+++ + LK R R++LQVHDEL++E D + ++E +
Sbjct: 801 IAMIHVN------------------EELKKRNLKSRMILQVHDELLIEADETELEEVQQI 842
Query: 2149 VQKCMESAALLLVPLLVKIQVGSTW 2173
+Q ME AA LLVPL V + G W
Sbjct: 843 LQDKMEHAAELLVPLSVDMHTGKNW 867
>gi|304407962|ref|ZP_07389612.1| DNA polymerase I [Paenibacillus curdlanolyticus YK9]
gi|304342981|gb|EFM08825.1| DNA polymerase I [Paenibacillus curdlanolyticus YK9]
Length = 885
Score = 230 bits (586), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 257/522 (49%), Gaps = 42/522 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D+ + +++L P D S L + + + ++K H +
Sbjct: 401 FDIQLAAYLLDPTDSTQSISGLCGKYGLPTVQADESVYGKGAKFKLPEAGVLHGHIASKT 460
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
R++ ++ + L + + ++E PL VLA MEL GI D Q L+ ++
Sbjct: 461 DAVRSIAAIQREELEKTGMHKLYYDLEQPLSRVLAGMELQGIRCDASVIEQLGAELESRI 520
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ K YTLAGM+F++ + + VL+ L LP+ + K K STD L+ L H
Sbjct: 521 SDIMTKVYTLAGMEFNINSPRQLGEVLFEKLGLPVIK---KTKTGYSTDADVLEKLEPYH 577
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
I+P I R LAKL + + + L I +T K +H ++ QT ATGRLS + PNLQ
Sbjct: 578 EIIPSILLFRQLAKLQSTYVEGL--LKEIRPNTGK--IHTYYRQTIAATGRLSSQYPNLQ 633
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + +I R F+PS+ W +LAADYSQIELR++AH S
Sbjct: 634 NIPIRLE---------------EGRQI--RKAFVPSEPGWFMLAADYSQIELRVLAHISG 676
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D L + D+ T A+ G + V + R Q K + +GI+YG+ LS LN
Sbjct: 677 DEGLKEAFVQDL-DIHTKTASDVFGVRPEDVDANMRRQAKAVNFGIVYGISDFGLSNNLN 735
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA + I+ + ++F GV ++ V+ GYV +L R+R+L +IK N +S
Sbjct: 736 ITRKEAAQFIEQYFAAFQGVRRYMDNIVAQARTDGYVTTLLERRRYLPEIKASNFNIRSF 795
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKG-RCRLLLQVHD 2131
A+R A+N+ QG+AADIIK+AM+ + D L A +G R R+LLQVHD
Sbjct: 796 AERTAMNTPIQGTAADIIKLAMVRM-----------DEQLRA-----RGLRSRMLLQVHD 839
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
ELV EV ++ LV + MESA L VPL + G W
Sbjct: 840 ELVFEVPADELELMKELVPQVMESAIKLDVPLKADVSFGDNW 881
>gi|170754800|ref|YP_001782645.1| DNA polymerase I [Clostridium botulinum B1 str. Okra]
gi|429246491|ref|ZP_19209809.1| DNA polymerase I [Clostridium botulinum CFSAN001628]
gi|169120012|gb|ACA43848.1| DNA polymerase I [Clostridium botulinum B1 str. Okra]
gi|428756407|gb|EKX78961.1| DNA polymerase I [Clostridium botulinum CFSAN001628]
Length = 875
Score = 230 bits (586), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 243/456 (53%), Gaps = 41/456 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L VL + + +++ E L +E PL L+ ME G VD + LQ + ++ +
Sbjct: 457 LYKVLEEKIKEQDMEELLYKVEQPLTETLSAMETEGFKVDKDILLQLEKKFKGEIESTQL 516
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ Y+++ +F++ + + +L+ L LP+ + K K ST+ LD LR +HPI+
Sbjct: 517 EIYSMSEEEFNINSPKQLGKILFEKLDLPVIK---KTKTGYSTNAEVLDKLRDKHPIIDK 573
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I +R L K+ + + + A I + +H ++ QT TATGRLS EPNLQ +
Sbjct: 574 ITYYRQLTKIYSTYIEGLK--AAIDEDGK---IHSNFNQTVTATGRLSSTEPNLQNIP-- 626
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
++++M E R FIP+ + ++L+ADYSQIELR++AH S D +I
Sbjct: 627 IKYEMGRE---------------IRKVFIPNTGDSVILSADYSQIELRVLAHISDDKNMI 671
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
++ H D+ T A+ + V R K + +GI+YG+G +LS+ LN + E
Sbjct: 672 SAFNE-HDDIHTKTASEVFKVPIEEVTPLMRSNAKAVNFGIVYGIGDFSLSQDLNITRKE 730
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
AK+ I ++ +P V +L V +KGYV ++ R+R++ ++K N K+ +R A
Sbjct: 731 AKQYIDAYLERYPNVKLYLENIVEEAVEKGYVSTILNRRRYIKEVKSSNKIVKAAGERLA 790
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+NS QGSAADIIK+AM+N+H + K D NF + ++LQVHDEL+L V
Sbjct: 791 MNSPIQGSAADIIKLAMVNVHKKL-----KED-----NF-----KSSIILQVHDELILNV 835
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++ +LV+K ME L V L V I +G+ W
Sbjct: 836 HKDELEKIKALVKKEMEQVLELKVGLDVDINIGNNW 871
>gi|425069608|ref|ZP_18472723.1| DNA polymerase I [Proteus mirabilis WGLW6]
gi|404597034|gb|EKA97541.1| DNA polymerase I [Proteus mirabilis WGLW6]
Length = 949
Score = 230 bits (586), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 146/437 (33%), Positives = 238/437 (54%), Gaps = 39/437 (8%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+PLV VL+ ME G+ +D + + ++L +EK+ + LAG +F+L + +
Sbjct: 548 DIEMPLVPVLSRMERKGVLIDAQVLAMQSQEITQRLAEIEKETFALAGQEFNLSSPKQLQ 607
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L+ L LPI + KG PST++ L+ L H H + +I EHR LAKL + +
Sbjct: 608 EILFEKLNLPIIKKTPKGA--PSTNEEVLEALAHSHELPRLILEHRGLAKLKSTYTDKLP 665
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
+ ++++ +H + Q TATGRLS +PNLQ + + NE+ G
Sbjct: 666 ----LMVNSKTKRVHTSYHQAVTATGRLSSRDPNLQNI------PVRNEE---GR----- 707
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R FI +++ + ++AADYSQIELR+MAH S+D L+ ++ D+ A+
Sbjct: 708 ---RIRQAFI-ARDGFKIVAADYSQIELRIMAHLSQDKGLLDAFAQ-GKDIHRATASEVF 762
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G D V S++R K + +G++YGM LS+Q+ EA+ + + +PGV ++
Sbjct: 763 GIPLDEVTSEQRRSAKAINFGLIYGMSAFGLSQQIGVERKEAQRYMDLYFERYPGVLDYM 822
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
Q+GYVE+L GR+ +L +I N + ++R+A+N+ QG+AADIIK AMI
Sbjct: 823 ERTRKQASQQGYVETLDGRRLYLPEINSKNAIRRKASEREAINAPMQGTAADIIKKAMIA 882
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
+ + I PD +++QVHDELV EV S +++A +++ K MES+
Sbjct: 883 VDNWICHEC--PDD------------VHMIMQVHDELVFEVRESYLEKANAMIHKLMESS 928
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +PL V++ VG+ W
Sbjct: 929 MELAIPLKVEVGVGNNW 945
>gi|389709965|ref|ZP_10186881.1| DNA polymerase I [Acinetobacter sp. HA]
gi|388610143|gb|EIM39275.1| DNA polymerase I [Acinetobacter sp. HA]
Length = 840
Score = 230 bits (586), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 191/703 (27%), Positives = 308/703 (43%), Gaps = 104/703 (14%)
Query: 1476 CLVNKDRACNKGPINAINASGGFDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLA 1535
L + D + + + +D +R F FD + + + +I G +
Sbjct: 233 SLTSSDDQLGQATYHTVLNQADWDALFNRLNTAQRFAFD----TETTSLDYRIAQIVGFS 288
Query: 1536 VCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEK 1595
V ++ YYV L D + + +R I +I I+E
Sbjct: 289 VAFDAEDAYYVPLAHDYENAPEQLNRETILA---------------------QIKPILED 327
Query: 1596 RDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDM 1655
+++K ++K VL++ G++ G F D
Sbjct: 328 DNIQKIGHHLKYDAHVLENH-----------------GIQLAGWYF------------DT 358
Query: 1656 CIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKN----QMRRAAHNGCCRR 1711
+ S++L R ++ + L++ A + + K ++ AAH
Sbjct: 359 MLASYVLNSVATRHGMDDVARLYLSHLTTTFEQIAGKGAKQKTFNQIEIETAAHYAAEDA 418
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
R + KL V EL+ LLNIE+P+ VL ME GI +D+ Q +
Sbjct: 419 HVTYRLYEVLHEKLKVHPELLNILLNIEMPVARVLTSMEENGIQLDLAFLDQLGCDFAET 478
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
++ LE++ +AG F++ + + +L+ KL + G ST + L+ L E
Sbjct: 479 MKNLEQQIEEMAGESFNVSSPKQVGEILFD--KLGLKGGKKTTTGQYSTSESILEKL--E 534
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
HPI +I +R L+KL + +C A + + +H + Q TATGRLS +PNL
Sbjct: 535 HPIAELILNYRGLSKLKSTYTDGLCKQA----NNDTHRVHTSYHQALTATGRLSSTDPNL 590
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + E R F+ + E ILLAADYSQIELRLMAH S
Sbjct: 591 QNIPIREEIGRQ-----------------IRKAFV-APEGRILLAADYSQIELRLMAHLS 632
Query: 1952 KDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
+D AL+ HG DV AA G + + V + +R Q K + +G+LYGM L+ Q
Sbjct: 633 QDDALVDAFI--HGQDVHRRTAAEVLGIALEDVTNDQRRQAKAVNFGLLYGMSEFGLTRQ 690
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L + E++E IK + +PG+ ++ ++G+VE++ GR+ + I N +
Sbjct: 691 LGFTRQESQEYIKQYFHRYPGIYEYMQRTRQVALEQGFVETILGRRLYTPDIDARNMMIR 750
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
A+R A+N+ QGSAADIIK+AMI + ++ K + ++LLQVH
Sbjct: 751 KAAERAAINAPLQGSAADIIKMAMIEVDKMLP-----------------KDQAKMLLQVH 793
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
DELV EVD ++ E S + + M+S + VPLLV++ G W
Sbjct: 794 DELVFEVDEAIADELASKLAEVMQSVVQISVPLLVEVGKGKNW 836
>gi|404404930|ref|ZP_10996514.1| DNA polymerase I [Alistipes sp. JC136]
Length = 958
Score = 230 bits (586), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 231/440 (52%), Gaps = 41/440 (9%)
Query: 1736 LNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG-MKFSLYTAAD 1794
+E P++ VLAD+E+ G+ +D L +KL LE T AG ++ +A
Sbjct: 554 FEVEEPMIAVLADIEMAGVRIDTGALAVYAVELNRKLGELEAAIRTEAGEANLNINSARQ 613
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ VL+ +++ K KQ TD+ L +H IV +I E+R + KLL+ + +
Sbjct: 614 LGEVLFAKMRIAEKPKMTKTKQF-CTDEDYLQSFARKHRIVDLILEYRGVKKLLSTYVEA 672
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ L ++ +T + +H + Q TATGRLS PNLQ +
Sbjct: 673 LPQL--VNRTTGR--IHTSFNQAVTATGRLSSTNPNLQNIPVR----------------- 711
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAA 1973
D R FIPS ++ +LL+ADYSQ+ELRLMAH S D +LI HG D+ T AA
Sbjct: 712 DDMGRRIRKAFIPSDDDHLLLSADYSQVELRLMAHLSGDESLIAAFE--HGEDIHTATAA 769
Query: 1974 RWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVA 2033
+ +S + V S+ER + K +GI+YG+ LS++L EAKE I + +S+P V
Sbjct: 770 KLFNKSLEEVTSEERRRAKTANFGIIYGISAFGLSQRLEIPRKEAKEIIDGYFASYPKVK 829
Query: 2034 SWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIA 2093
++ V ++G+V ++ GR+R+L+ I N + A+R AVN+ QGSAADI+KIA
Sbjct: 830 EYMDNVVEKAKEEGFVSTIFGRRRYLNDISSHNAVARGLAERNAVNAPIQGSAADIMKIA 889
Query: 2094 MINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCM 2153
MIN+H F R R++LQVHDELV+++ S + ++V +CM
Sbjct: 890 MINVHR---------------RFAAEGIRSRVILQVHDELVVDMLRSEQERVTAIVTECM 934
Query: 2154 ESAALLLVPLLVKIQVGSTW 2173
ESAA L V L+ VG W
Sbjct: 935 ESAAQLKVRLIADAGVGDNW 954
>gi|400290935|ref|ZP_10792962.1| DNA polymerase I [Streptococcus ratti FA-1 = DSM 20564]
gi|399921726|gb|EJN94543.1| DNA polymerase I [Streptococcus ratti FA-1 = DSM 20564]
Length = 878
Score = 230 bits (586), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 239/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEE----------LIEALLNIEIPLVNVLADMELW 1752
G R V L S L K L+ SEE ++ L +E+PL NVLA ME+
Sbjct: 432 GAKRAVPDKDVLLSHLAKKISVLIASEEPMRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI + E + +L L ++ Y LAG +F++ + + +L+ L LP+
Sbjct: 492 GISIKKETLKDMERANEIELEALTQEIYALAGEEFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I +S + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQEAVSFDDK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWPDS 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I ++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIDTYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMIN+ ++ G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMINLDKALMQGNYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV +K LV++ MESA L VPL+ G
Sbjct: 824 ------------ARMLLQVHDEIVLEVPNKELKAVKQLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|386345979|ref|YP_006044228.1| DNA polymerase I [Spirochaeta thermophila DSM 6578]
gi|339410946|gb|AEJ60511.1| DNA polymerase I [Spirochaeta thermophila DSM 6578]
Length = 897
Score = 230 bits (586), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 236/457 (51%), Gaps = 41/457 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L VL + L + +L +E+PL+++LA ME WGIG+D E L +++ +E
Sbjct: 479 LSRVLKERLEAGDLGRVFYEMEMPLLSILARMEEWGIGLDGEALSAFGRELDERISNIEN 538
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ + L G +F++ + + VL+ LP K K STD L+ L + P+
Sbjct: 539 EIFDLVGHEFNVGSTKQLQEVLFVERGLP---PVKKTKTGFSTDTSVLEELAAQDPVAAK 595
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
+ E+R+L KL N + + L ++ + LH + Q TATGRLS ++PNLQ +
Sbjct: 596 VLEYRSLTKLKNTYVDVLPGL----VNPETGRLHTWFSQVGTATGRLSSKDPNLQNIPIK 651
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
E + +I R+ F+P Q W L+ADYSQIEL ++AH S DPAL
Sbjct: 652 TE---------------EGRRI--REAFVP-QRGWWFLSADYSQIELVILAHLSGDPALC 693
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
+ DV + G ++V ++R K + +G++YGM LS +L E
Sbjct: 694 RAFREGE-DVHRATGSLLFGVPPETVTPEQRRIAKTINFGVIYGMSAFRLSRELGIPRKE 752
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
A+ I ++ +++ GV +++ ++ +KGYV +L GRKR L I N +K+ A+R A
Sbjct: 753 AERFINAYFTTYAGVRAFIERTIAEAEEKGYVTTLFGRKRPLPYITSRNKTQKTGAERIA 812
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
VN+ QGS ADIIK+AMI+ L A + + R++LQVHDEL+ EV
Sbjct: 813 VNTPIQGSGADIIKLAMID---------------LDAQMRRMGLASRMILQVHDELIFEV 857
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
P ++ LV++ ME L VPL V+I VG WG
Sbjct: 858 PPEELEVMKRLVRERMEGVVRLSVPLRVEIGVGRNWG 894
>gi|168179504|ref|ZP_02614168.1| DNA polymerase I [Clostridium botulinum NCTC 2916]
gi|182669730|gb|EDT81706.1| DNA polymerase I [Clostridium botulinum NCTC 2916]
Length = 875
Score = 230 bits (586), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 242/456 (53%), Gaps = 41/456 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L VL + + +++ E L +E PL L+ ME G VD + LQ + ++ +
Sbjct: 457 LYKVLEEKIKEQDMEELLYKVEQPLTETLSAMETEGFKVDKDILLQLEKRFKGEIESTQL 516
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ Y+++ +F++ + + +L+ L LP+ + K K ST+ LD LR +HPI+
Sbjct: 517 EIYSMSEEEFNINSPKQLGKILFEKLDLPVIK---KTKTGYSTNAEVLDKLRDKHPIIDK 573
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I +R L K+ + + + + + +H ++ QT TATGRLS EPNLQ +
Sbjct: 574 ITYYRQLTKIYSTYIEGLKAAI-----DEDGKIHSNFNQTVTATGRLSSTEPNLQNIP-- 626
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
++++M E R FIP+ + ++L+ADYSQIELR++AH S D +I
Sbjct: 627 IKYEMGRE---------------IRKVFIPNTGDSVILSADYSQIELRVLAHISDDKNMI 671
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
++ H D+ T A+ + V R K + +GI+YG+G +LS+ LN + E
Sbjct: 672 SAFNE-HDDIHTKTASEVFKVPIEEVTPLMRSNAKAVNFGIVYGIGDFSLSQDLNITRKE 730
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
AK+ I ++ +P V +L V +KGYV ++ R+R++ ++K N K+ +R A
Sbjct: 731 AKQYIDAYLERYPNVKLYLENIVEEAVEKGYVSTILNRRRYIKEVKSSNKIVKAAGERLA 790
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+NS QGSAADIIK+AM+N+H + K D NF + ++LQVHDEL+L V
Sbjct: 791 MNSPIQGSAADIIKLAMVNVHRKL-----KED-----NF-----KSSIILQVHDELILNV 835
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++ +LV+K ME L V L V I +G+ W
Sbjct: 836 HKDELEKIKALVKKEMEQVLELKVGLDVDINIGNNW 871
>gi|441506550|ref|ZP_20988518.1| DNA polymerase I [Photobacterium sp. AK15]
gi|441425756|gb|ELR63250.1| DNA polymerase I [Photobacterium sp. AK15]
Length = 923
Score = 230 bits (586), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 154/452 (34%), Positives = 245/452 (54%), Gaps = 43/452 (9%)
Query: 1724 KLLVSEELIEALLNIEIPLVNVLADMELWGIGVD-MEGCLQARNLLQKKLRYLEKKAYTL 1782
K+ E+L +IE+PLV VL+ ME G+ +D M+ Q+ + +L LE+KAY +
Sbjct: 509 KVNADEKLKSVFEDIEMPLVPVLSRMERTGVLIDSMQLSAQSAEI-AARLDELEQKAYEI 567
Query: 1783 AGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHR 1842
A +F+L + + +L+ + LP+ + G PST++ L L ++P+ +I E+R
Sbjct: 568 AEQEFNLSSPKQLQAILFEKMGLPVLKKTPSGA--PSTNEEVLQELALDYPLPKLILEYR 625
Query: 1843 TLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKM 1902
LAKL + + + ++ +T + +H + Q TATGRLS +PNLQ + +
Sbjct: 626 GLAKLKSTYTDKLPKM--VNPATGR--VHTSYHQAVTATGRLSSSDPNLQNI------PV 675
Query: 1903 SNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSK 1962
NE+ + + F P+ + +LA DYSQIELR+MAH S D AL+
Sbjct: 676 RNEE----------GRRIRQAFIAPT--GYKVLAVDYSQIELRIMAHLSGDKALVDAFK- 722
Query: 1963 PHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEK 2021
HG D+ AA G +SV S++R + K + +G++YGM L++QL+ NEA+E
Sbjct: 723 -HGKDIHAATAAEILGLPIESVTSEQRRRAKAINFGLIYGMSAFGLAKQLDMGRNEAQEY 781
Query: 2022 IKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSI 2081
+ + +PGV ++ ++ ++GYVE+L GR+ +L IK N + A+R A+N+
Sbjct: 782 MNVYFERYPGVLEYMESTRTAASEQGYVETLFGRRLYLPDIKSRNGMRRKAAERAAINAP 841
Query: 2082 CQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSV 2141
QG+AADIIK AM+ + + Q GR RLL+QVHDELV EV S
Sbjct: 842 MQGTAADIIKRAMVMVDEWVE--------------QQEPGRVRLLMQVHDELVFEVQESE 887
Query: 2142 IKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++ + +++ MESAA L VPL+ + G W
Sbjct: 888 LESVSAEIRRLMESAAELDVPLIAEAGSGDNW 919
>gi|374323097|ref|YP_005076226.1| DNA polymerase i [Paenibacillus terrae HPL-003]
gi|357202106|gb|AET60003.1| DNA polymerase i [Paenibacillus terrae HPL-003]
Length = 884
Score = 230 bits (586), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 263/543 (48%), Gaps = 56/543 (10%)
Query: 1633 GLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSS--EAAAAA 1690
G+E G+ F D+ + ++L P D S L K LSS
Sbjct: 392 GIEFAGAEF------------DVQLAGYLLDPTDANQSLSGLA--AKYGLSSIRPDDEVF 437
Query: 1691 NRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADME 1750
+ ++K + R+ A AL V L E+ + +E+PL +LADME
Sbjct: 438 GKGAKYKVPDVDVLSDHVARKAAVIEALVPVQQAELEKTEMHKLFHELEMPLSRILADME 497
Query: 1751 LWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG 1810
GI V++E + ++ L ++ Y +AG++F+L + + +L+ L LP+ +
Sbjct: 498 KQGILVNVEELRALGKEFEAQIETLVREIYIIAGVEFNLNSPKQLGEILFDKLGLPVIK- 556
Query: 1811 HNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL 1870
K K STD L+ L H IV I ++RT+AKL + + + L IS T K L
Sbjct: 557 --KTKTGYSTDAEVLEKLAPYHDIVQNILQYRTIAKLQSTYVEGL--LKEISDKTGK--L 610
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQE 1930
H ++ QT ATGRLS + PNLQ + +E + KI R F+PS+
Sbjct: 611 HTYFRQTVAATGRLSSQFPNLQNIPIRLE---------------EGRKI--RKVFVPSEP 653
Query: 1931 NWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQ 1990
W +LAADYSQIELR++A S D L D+ T A+ G + V S R
Sbjct: 654 GWSILAADYSQIELRVLADISDDERLKEAFVHDM-DIHTKTASDVFGIPAEDVDSNMRRS 712
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +GI+YG+ LS+ LN + EA I + F GV ++ V + GYV+
Sbjct: 713 AKAVNFGIVYGISDYGLSQNLNITRKEAARFIDQYFDVFQGVRRYMDDIVKDAKRDGYVK 772
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R+L +I N +S A+R A+N+ QG+AADIIK+AM+ + + + D
Sbjct: 773 TLLERRRYLPEINASNFNLRSFAERTAMNTPIQGTAADIIKLAMVQMDAAL------RDR 826
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
+L R R+LLQVHDELV EV P ++ LV ME+A L VPL ++ G
Sbjct: 827 NL---------RSRMLLQVHDELVFEVPPEEMETMKELVPATMEAALKLAVPLKAEVSYG 877
Query: 2171 STW 2173
S W
Sbjct: 878 SNW 880
>gi|333374341|ref|ZP_08466223.1| DNA-directed DNA polymerase I [Desmospora sp. 8437]
gi|332967876|gb|EGK06971.1| DNA-directed DNA polymerase I [Desmospora sp. 8437]
Length = 881
Score = 230 bits (586), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 161/453 (35%), Positives = 232/453 (51%), Gaps = 45/453 (9%)
Query: 1726 LVSEELIE-----ALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAY 1780
L+ EEL E L++E+PL VLA ME G+ VD + L+ +L L +K +
Sbjct: 465 LLEEELKENGLDSLYLDLELPLARVLAKMEWQGVQVDRDRLQSLGEELKGRLEELTEKIF 524
Query: 1781 TLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKE 1840
LAG +F++ + + +L+ L LP+ + K K ST L+ L +H IV I
Sbjct: 525 ELAGTEFNINSPKQLGEILFDKLGLPVLK---KTKTGYSTSADVLEKLAPQHEIVEEILH 581
Query: 1841 HRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEF 1900
+R + KL++ + + L I T K +H + Q ATGRLS +PNLQ + +E
Sbjct: 582 YRQVGKLISTYVEGL--LKEIDGETGK--IHTRFNQAIAATGRLSSTDPNLQNIPIRLE- 636
Query: 1901 KMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLL 1960
+ +I R F+PS+E W++L+ADYSQIELR++AH S D LI
Sbjct: 637 --------------EGRRI--RQVFVPSEEEWLMLSADYSQIELRVLAHLSGDENLIEAF 680
Query: 1961 SKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKE 2020
K DV T A G S D V R K + +GI+YG+ LS+ LN EA E
Sbjct: 681 QK-ELDVHTKTAMDVFGVSADEVTPWMRRHAKAVNFGIVYGISDYGLSQNLNIPRKEAAE 739
Query: 2021 KIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNS 2080
I+ + S+PGV ++ V GYV ++ R+R L +I N +S A+R A+N+
Sbjct: 740 FIQRYFDSYPGVKRYMEDIVRQAKADGYVTTMLHRRRELPEINSRNFNRRSFAERTAMNT 799
Query: 2081 ICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPS 2140
QG+AADIIK AM+ + S++ + R RLLLQVHDEL+ E
Sbjct: 800 PIQGTAADIIKKAMVEMDSVL---------------EKEGLRARLLLQVHDELIFETPAE 844
Query: 2141 VIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++ +LV++ MESA L VPL V I G TW
Sbjct: 845 EMEALDNLVRRVMESAVELAVPLQVDINTGKTW 877
>gi|158335307|ref|YP_001516479.1| DNA polymerase I [Acaryochloris marina MBIC11017]
gi|158305548|gb|ABW27165.1| DNA polymerase I [Acaryochloris marina MBIC11017]
Length = 957
Score = 230 bits (586), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 233/457 (50%), Gaps = 64/457 (14%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL VLA ME G+ +D E L+ L+ LE AY LAG F+L + ++
Sbjct: 540 VELPLEAVLAVMETSGVRIDQEYLQTLSTQLEADLQRLEAGAYELAGEIFNLGSPKQLSE 599
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+G L+L + + K K STD L+ L+ +HPI+ V+ E+RTLAKL + + ++
Sbjct: 600 ILFGRLELDVKKSR-KTKLGYSTDAATLEKLQGDHPIIDVLLEYRTLAKLKSTYVDALPM 658
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
L R + +H + Q TATGRLS PNLQ + EF
Sbjct: 659 LVR----DDTHRIHTDFNQAVTATGRLSSSNPNLQNIPIRTEFSR--------------- 699
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R FIP + +WIL+AADYSQIELR++AH S++P L+ DV T+ A
Sbjct: 700 --QIRAAFIP-ESSWILMAADYSQIELRILAHLSQEPRLLEAYRNGQ-DVHTLTAQLLL- 754
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
+D + ++ER K + +G++YGMGP+ + + +EAK+ I+ F +P V ++L
Sbjct: 755 -EKDQIAAEERRLAKIINFGVIYGMGPHRFAREAGVKYSEAKDFIQRFYDRYPEVFAYLQ 813
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA---------------------QRQ 2076
+GYVE++ GR+R+ G K + KA R
Sbjct: 814 RMEREAVSQGYVETILGRRRYFEFDSRGLKKYRGKALEELAEVDLSDIKMSSYDRGLLRA 873
Query: 2077 AVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLE 2136
A N+ QGS+AD+IKIAM+ + + + +P S RLL+QVHDELVLE
Sbjct: 874 AANAPIQGSSADLIKIAMVQLQAAL-----EPYKS------------RLLMQVHDELVLE 916
Query: 2137 VDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V + + S ++ ME+A L +PL+ ++ G+ W
Sbjct: 917 VPVDEVDDVRSQIKTTMETALPLSIPLVAEVHTGANW 953
>gi|338534293|ref|YP_004667627.1| DNA polymerase I [Myxococcus fulvus HW-1]
gi|337260389|gb|AEI66549.1| DNA polymerase I [Myxococcus fulvus HW-1]
Length = 908
Score = 230 bits (586), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 188/612 (30%), Positives = 296/612 (48%), Gaps = 68/612 (11%)
Query: 1571 NVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGT 1630
V P+ Q + R ++G K + FT + +VL+ AAV + GG +L
Sbjct: 354 GVALPDGQTAYVPLRHAQLGVTQVKPEA--FTAAFR---EVLEDAAV---KKGGHDLKAL 405
Query: 1631 SLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAA 1690
SL L N G L L H D+ ++S++L P + +L +E RL SE
Sbjct: 406 SLVLANDG---LTLHGAH----DDVELLSYLLNPSRREHALVDLARE---RLYSELPPLP 455
Query: 1691 NRS--GRWKNQMRRAAHN------GCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPL 1742
N + R K A H G R R L LWK L + +L ++E+PL
Sbjct: 456 NAAEGKRGKKDRALADHTVEEVATGFAIRAEAARRLAPELWKELEAAKLAALARDMELPL 515
Query: 1743 VNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGH 1802
+ +LA ME G+ +D + + + K+ Y AG +F++ + + VL+
Sbjct: 516 LPLLARMERRGVLLDTAELSRTSVKVDAAVEAQVKEVYRHAGREFNIGSNPQLVEVLFTE 575
Query: 1803 LKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARIS 1862
LKLP+ +GK PS D+ L+ L EHP+ I E+R+L+KL + L ++ +L
Sbjct: 576 LKLPV---IKRGKTGPSADQEVLEKLSEEHPLPGAIIEYRSLSKLKSTYLDTLPTLV--- 629
Query: 1863 MSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINAR 1922
+H + Q +TATGRLS +PNLQ + V + E R
Sbjct: 630 --AADGRIHTTYHQAATATGRLSSTDPNLQNIP--VRTDLGRE---------------IR 670
Query: 1923 DFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS 1982
F+ + E L++ADYSQ+ELRL+AH + D LI D+ T AA G +++
Sbjct: 671 RAFV-AAEGHQLVSADYSQVELRLLAHIANDAVLIEAFLHDE-DIHTRTAAEVFGVAKEQ 728
Query: 1983 VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSS 2042
V ++R K + +GI YG+ P+ L+ +L + + A++ I+ + + + G+ +L VS
Sbjct: 729 VDREQRRVAKMVNFGIAYGLSPHGLAARLGIAQDVARDIIERYFTRYAGIKRYLEETVSV 788
Query: 2043 CHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIV 2102
+ GYVE+L GR+R+++ + N A+R A+N QG+AAD+IK AM+ +
Sbjct: 789 ARKTGYVETLYGRRRYMADLNSKNRGVAQAAERAAINMPIQGTAADLIKKAMLAV----- 843
Query: 2103 GGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVP 2162
D++L A K R+LLQVHDEL+ E + ++ +L K M S A L VP
Sbjct: 844 ------DAALEAQ----KLSARMLLQVHDELLFEAPDAEVEAVKALAVKAMSSVADLKVP 893
Query: 2163 LLVKIQVGSTWG 2174
L V + G +W
Sbjct: 894 LKVDVGAGRSWA 905
>gi|154494277|ref|ZP_02033597.1| hypothetical protein PARMER_03628 [Parabacteroides merdae ATCC 43184]
gi|423723105|ref|ZP_17697258.1| DNA polymerase I [Parabacteroides merdae CL09T00C40]
gi|154085961|gb|EDN85006.1| DNA-directed DNA polymerase [Parabacteroides merdae ATCC 43184]
gi|409241530|gb|EKN34298.1| DNA polymerase I [Parabacteroides merdae CL09T00C40]
Length = 940
Score = 230 bits (586), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 235/449 (52%), Gaps = 41/449 (9%)
Query: 1727 VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
+ +E +E+L +IE+PL+ VLA+ME G+ +D Q+ L L+ LEK+ Y LAGM
Sbjct: 527 LEKEGLESLFYDIEMPLIYVLAEMEYTGVTLDTVALKQSSEELTTALKKLEKEIYELAGM 586
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHP-STDKHCLDLLRHEHPIVPVIKEHRTL 1844
KF++ +A + VL+ HLK I E K K ST + L+ +R +HP+V + E+R L
Sbjct: 587 KFNINSARQVGEVLFDHLK--IEEKARKTKTGSYSTSEEILEKMRSKHPVVGKLLEYRGL 644
Query: 1845 AKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN 1904
KLL+ + ++ L I+ T K +H + Q T+TGRLS PNLQ +
Sbjct: 645 KKLLSTYIDALPEL--INPETGK--IHTSYNQAVTSTGRLSSTNPNLQNIPVR------- 693
Query: 1905 EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
D R F E+ I +ADYSQIELR+MAH S+D +I +
Sbjct: 694 ----------DELGREIRKAFTAENEDCIFFSADYSQIELRIMAHLSQDAHMIEAF-RSG 742
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
D+ AA+ G + V S R + K +GI+YG+ L+E+L+ E+KE I+
Sbjct: 743 ADIHAATAAKIYGIPVEEVTSDMRRKAKTANFGIIYGISVFGLAERLSIPRAESKELIEG 802
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
+ ++P + +++ ++ +KGYVE++ RKRFL I N + A+R A+N+ QG
Sbjct: 803 YFKTYPDIRAYMDESIEVAKEKGYVETIYKRKRFLPDINSHNAIVRGYAERNAINAPIQG 862
Query: 2085 SAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKE 2144
SAADIIK+AM+ I + F+ + +++LQVHDEL V +++
Sbjct: 863 SAADIIKVAMVRIFN---------------RFETEGLKSKMILQVHDELNFNVYKDELEK 907
Query: 2145 AVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+V ME+A L VPL+ G W
Sbjct: 908 VKQIVLDEMENAIKLQVPLIADCGEGVNW 936
>gi|359446945|ref|ZP_09236573.1| DNA polymerase I [Pseudoalteromonas sp. BSi20439]
gi|358039199|dbj|GAA72822.1| DNA polymerase I [Pseudoalteromonas sp. BSi20439]
Length = 911
Score = 230 bits (586), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 240/461 (52%), Gaps = 42/461 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VLW KL E+L NIE+PLV+V++D+E G+ +D L ++L
Sbjct: 487 TLRLHQVLWPKLEADEKLKSVFENIEMPLVSVISDIERTGVAIDSNMLATHSQRLGERLL 546
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LEK+A+ +AG F+L + + +L+ L+LP+ + KG PST + L L H++P
Sbjct: 547 ELEKEAFEIAGEPFNLSSPKQLQVLLFEKLELPVIKKTPKGA--PSTAEEVLQELAHDYP 604
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI EHR L+KL + + + ++ Q +H + Q TATGRLS +PNLQ
Sbjct: 605 LPKVIIEHRGLSKLKSTYTDKLP----LIVNEQTKRVHTSYHQAVTATGRLSSSDPNLQN 660
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E + +I R+ FI + + + ++AADYSQIELR+MAH S+D
Sbjct: 661 IPIRSE---------------EGRRI--REAFI-AADGYKIVAADYSQIELRIMAHLSQD 702
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
L+ + +G DV + AA G + V S R + K + +G++YGM L+ QL+
Sbjct: 703 KGLLNAFA--NGLDVHSATAAEVFGVELEEVTSDMRRKAKAVNFGLIYGMSAFGLARQLD 760
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+EA+ I + FPGV ++ + GYVE++ GR+ L +I N +
Sbjct: 761 VPRHEAQHYIDKYFERFPGVLEYMETTREKAAENGYVETIFGRRLHLPEINARNGARRKG 820
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK AM+ +H+ + Q +LL+QVHDE
Sbjct: 821 AERAAINAPMQGTAADIIKKAMLTVHAWV--------------NQQAPNTVKLLMQVHDE 866
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV E+ ++ + + M AA L VPL+V+ G W
Sbjct: 867 LVFEIKTECTEQYTQQICELMSQAAQLDVPLIVEADEGDNW 907
>gi|359438125|ref|ZP_09228166.1| DNA polymerase I [Pseudoalteromonas sp. BSi20311]
gi|358027176|dbj|GAA64415.1| DNA polymerase I [Pseudoalteromonas sp. BSi20311]
Length = 911
Score = 230 bits (586), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 240/461 (52%), Gaps = 42/461 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VLW KL E+L NIE+PLV+V++D+E G+ +D L ++L
Sbjct: 487 TLRLHQVLWPKLEADEKLKSVFENIEMPLVSVISDIERTGVAIDSNMLATHSQRLGERLL 546
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LEK+A+ +AG F+L + + +L+ L+LP+ + KG PST + L L H++P
Sbjct: 547 ELEKEAFEIAGEPFNLSSPKQLQVLLFEKLELPVIKKTPKGA--PSTAEEVLQELAHDYP 604
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI EHR L+KL + + + ++ Q +H + Q TATGRLS +PNLQ
Sbjct: 605 LPKVIIEHRGLSKLKSTYTDKLP----LIVNEQTKRVHTSYHQAVTATGRLSSSDPNLQN 660
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E + +I R+ FI + + + ++AADYSQIELR+MAH S+D
Sbjct: 661 IPIRSE---------------EGRRI--REAFI-AADGYKIVAADYSQIELRIMAHLSQD 702
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
L+ + +G DV + AA G + V S R + K + +G++YGM L+ QL+
Sbjct: 703 KGLLNAFA--NGLDVHSATAAEVFGVELEEVTSDMRRKAKAVNFGLIYGMSAFGLARQLD 760
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+EA+ I + FPGV ++ + GYVE++ GR+ L +I N +
Sbjct: 761 VPRHEAQHYIDKYFERFPGVLEYMETTREKAAENGYVETIFGRRLHLPEINARNGARRKG 820
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK AM+ +H+ + Q +LL+QVHDE
Sbjct: 821 AERAAINAPMQGTAADIIKKAMLTVHAWV--------------NQQAPNTVKLLMQVHDE 866
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV E+ ++ + + M AA L VPL+V+ G W
Sbjct: 867 LVFEIKTECTEQYTQQICELMSQAAQLDVPLIVEADEGDNW 907
>gi|386585743|ref|YP_006082145.1| DNA polymerase I [Streptococcus suis D12]
gi|353737889|gb|AER18897.1| DNA polymerase I [Streptococcus suis D12]
Length = 878
Score = 230 bits (586), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 240/449 (53%), Gaps = 52/449 (11%)
Query: 1732 IEALLNIEIPLVNVLADMELWGIGVDMEG--CLQARNLLQKKLRYLEKKAYTLAGMKFSL 1789
++ L ++E+PL NVLA ME+ GI V+ E +Q+ N + + L K+ Y LAG +F++
Sbjct: 471 LDLLFDMELPLANVLAKMEIAGIKVEAETLKAMQSEN--EVLIDQLTKEIYELAGQEFNI 528
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIK---EHRTLAK 1846
+ + +L+ + LP+ E K K ST +D+L PI PV+ E+R + K
Sbjct: 529 NSPKQLGTILFEDMGLPL-EYTKKTKTGYST---AVDVLERLAPIAPVVSKILEYRQITK 584
Query: 1847 LLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNED 1906
L + + L + K +H ++Q T TGRLS +PNLQ +
Sbjct: 585 LQST---YVVGLQDAILEDGK--IHTRYVQDLTQTGRLSSTDPNLQNIP----------- 628
Query: 1907 IYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGD 1966
+D ++ R F+PS EN +LLA+DYSQIELR++AH S+D LI + D
Sbjct: 629 -----VRLDQGRL-IRKAFVPSLENSVLLASDYSQIELRVLAHISQDQHLIEAFQQ-GAD 681
Query: 1967 VFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
+ T A R G ++ED V +R K + +G++YG+ LS L + EAK I +
Sbjct: 682 IHTSTAMRVFGIEKAED-VTPNDRRNAKAVNFGVVYGISDFGLSNNLGITRKEAKAYIDT 740
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
+ FPG+ +++ V KGYVE++ R+R L I N ++ A+R A+NS QG
Sbjct: 741 YFERFPGIKNYMETIVREARDKGYVETIYKRRRELPDINSRNFNVRNFAERTAINSPIQG 800
Query: 2085 SAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKE 2144
SAADI+K+AMIN+ + ++ LA R+LLQVHDE+VLEV + ++
Sbjct: 801 SAADILKVAMINLDKALT------ETGLA---------TRMLLQVHDEIVLEVPVAELET 845
Query: 2145 AVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++V++ MESA L VPL+ GSTW
Sbjct: 846 VKAMVKETMESAISLSVPLIADENEGSTW 874
>gi|374606089|ref|ZP_09678986.1| DNA polymerase i [Paenibacillus dendritiformis C454]
gi|374388316|gb|EHQ59741.1| DNA polymerase i [Paenibacillus dendritiformis C454]
Length = 889
Score = 229 bits (585), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 255/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D+ + +++L P+D ++ ++ ++ S + A + ++K R+
Sbjct: 405 FDVHLAAYLLNPEDASATLQSVAEKYGLPSSQDNDAVYGKGAKFKVPETTVVAEHAARKA 464
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
R L V+ K L +E+ ++E+PL VLA ME GI V+ + ++++
Sbjct: 465 KLVRLLKPVMEKALQDQEMNRLYYDLELPLSKVLAQMEKTGIRVNKQSLHDLGTNFKQQI 524
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ Y LAG +F++ + + +L+ L+LP+ + K K STD L+ L H
Sbjct: 525 EETMARIYELAGTEFNIGSPKQLGEILFDKLRLPVIK---KTKTGYSTDAEVLEKLEPYH 581
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
I+P+I +R + KL + + + L + ST K +H ++ QT ATGRLS + PNLQ
Sbjct: 582 DIIPLILLYRQMTKLQSTYIEGL--LKEVRESTGK--VHTYYRQTIAATGRLSSQYPNLQ 637
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + +I R F+PS+ W ++AADYSQIELR++AH S
Sbjct: 638 NIPIRLE---------------EGRQI--RQAFVPSEPGWHIVAADYSQIELRVLAHISG 680
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D L D+ T A G + D V S R Q K + +GI+YG+ LS+ L+
Sbjct: 681 DDKLKEAFIHDM-DIHTKTAMDVFGVAADQVDSNMRRQAKAVNFGIVYGISDYGLSQNLH 739
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + F GV ++ V Q GYV +L R+R+L I N +S
Sbjct: 740 ITRKEAAAFIDQYFHVFRGVRQYMDDIVKQARQDGYVTTLLERRRYLKDINASNYNLRSF 799
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK+AM+ + A + L + R+LLQVHDE
Sbjct: 800 AERTAMNTPIQGTAADIIKLAMVQ---------------MDAKLKELGLKSRMLLQVHDE 844
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV EV + LV + ME+A L VPL + GS W
Sbjct: 845 LVFEVPEDEVDTMKKLVPEVMEAALKLDVPLRADVSSGSNW 885
>gi|320162435|ref|YP_004175660.1| DNA polymerase I [Anaerolinea thermophila UNI-1]
gi|319996289|dbj|BAJ65060.1| DNA polymerase I [Anaerolinea thermophila UNI-1]
Length = 938
Score = 229 bits (585), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 163/538 (30%), Positives = 266/538 (49%), Gaps = 51/538 (9%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D + W++ D S L++ ++ L + G KNQ R A +
Sbjct: 443 AFDTLLAEWLV---DPASRALGLKEMAERYLGVQMTRIEELIGTGKNQ-RTMAQVSVAQV 498
Query: 1712 VAQTRALCSVLWKL--LVSEELIEA-----LLNIEIPLVNVLADMELWGIGVDMEGCLQA 1764
A + +L ++ E +++A ++E+PLV VLADME GI +D+ +
Sbjct: 499 APYAAADAEITLRLKPILEERMLKAGVTRLFQDVEMPLVPVLADMEWNGILLDVPFLQRM 558
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQH-PSTDKH 1823
L ++L +EK+ Y L G F++ + ++ VL+ L+L P+ K ST
Sbjct: 559 GVELSQRLAEIEKEIYALVGHPFNINSTQQLSRVLFEELRLEPPDRRKKTSAGLYSTSAE 618
Query: 1824 CLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGR 1883
L+ LR HP++ +I E+R L+KL + + ++ ++ + +H + QT + TGR
Sbjct: 619 VLEELRGRHPVLDLILENRELSKLKSTYVDALPQ----QVNPRTGRVHTRFNQTGSVTGR 674
Query: 1884 LSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIE 1943
L+ +PNLQ + + R+ FI + E W+LL+ DYSQIE
Sbjct: 675 LASSDPNLQNIPTRTDLGR-----------------QVRNAFI-ADEGWVLLSVDYSQIE 716
Query: 1944 LRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMG 2003
LR++AH + D A++ + D+ AA G ++V + R K + +G++YGM
Sbjct: 717 LRIVAHVANDEAMLAAF-RAGQDIHAATAAAIYGVPLEAVTREMRRHAKAINFGLIYGMS 775
Query: 2004 PNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIK 2063
LS + + EA+ +K++ FPGV +L ++GYVE+L GR+R+ +K
Sbjct: 776 AFGLSRSADLTLAEAENFVKAYFEQFPGVKRFLDDLRRRAAREGYVETLLGRRRYFPNLK 835
Query: 2064 F-GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR 2122
N K++ +R+A+N+ QG+AADIIK+AMI + P++ AA R
Sbjct: 836 NPANPALKAREEREAINAPIQGTAADIIKLAMIRL----------PEALRAAG-----SR 880
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
RLLLQVHDELVLEV + LVQ ME+A L +PL + + G WG + P +
Sbjct: 881 ARLLLQVHDELVLEVPREEMPGTAKLVQHVMETAYPLQIPLTTEARWGKNWGEMTPLE 938
>gi|373111034|ref|ZP_09525294.1| DNA polymerase I [Myroides odoratimimus CCUG 10230]
gi|371641095|gb|EHO06682.1| DNA polymerase I [Myroides odoratimimus CCUG 10230]
Length = 939
Score = 229 bits (585), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 174/603 (28%), Positives = 278/603 (46%), Gaps = 72/603 (11%)
Query: 1575 PEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGL 1634
PE+Q E K ++ E ++ K N+K I++LK + ++
Sbjct: 401 PENQDEA-KALAQQFAPFFEAENIEKIGQNLKYDIKILKQYDIVVK-------------- 445
Query: 1635 ENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSG 1694
G F D I +++ PD R + L + K + G
Sbjct: 446 ---GPLF------------DTMIAHYLINPD-MRHNMDVLAETYLKYTPQPIEELIGKKG 489
Query: 1695 RWKNQMRRAAHNGCCRRVAQ----TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADME 1750
+ + MR + T L LV+ E NIEIPLVNVLADME
Sbjct: 490 KNQKTMRDIDAEIVKEYAGEDADITYQLKETFAPQLVATHTQELFDNIEIPLVNVLADME 549
Query: 1751 LWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG 1810
GI +D E + L ++ LE++ + AG +F+L + + ++L+ L++ +
Sbjct: 550 TEGIRLDTEYLKSLSDTLSTDIKLLEQRIFLEAGEEFNLASPKQLGDILFEKLQIGGSKP 609
Query: 1811 HNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL 1870
+T + L L +H IV I E R L KL N + ++ ++++ T + +
Sbjct: 610 KKTKTGQYATGEEILSDLAPKHEIVRDILEWRQLVKLQNTYVDALPD--QVNIKTNR--V 665
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQE 1930
H ++Q ATGRLS PNLQ + E R F+ E
Sbjct: 666 HTEYMQAVAATGRLSSNNPNLQNIPIRTERGRQ-----------------VRKAFVARDE 708
Query: 1931 NWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQ 1990
N++LLAADYSQIELR++A S++P ++ + D+ AA+ + V ++R
Sbjct: 709 NYVLLAADYSQIELRIIAALSQEPNMLESFQRGE-DIHRSTAAKVFNVPLEEVTKEQRSH 767
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +GI+YG+ LS Q N S E+KE I ++ +++P + S++ + + GYV+
Sbjct: 768 AKTVNFGIIYGVSAFGLSNQTNLSRAESKELIDAYYATYPKLKSYIATQIDFAREHGYVQ 827
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
++ GR+R+L I N K A+R AVN+ QGSAADIIKIAMINI+ + +K
Sbjct: 828 TILGRRRYLKDIHSHNAVVKGAAERNAVNAPIQGSAADIIKIAMININKKLTAENWK--- 884
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
++LLQVHDELV + ++ ++V+ ME+A L VPL+V + G
Sbjct: 885 ------------SKMLLQVHDELVFDAHKEELEALKTMVKSEMENAYKLDVPLIVDLGTG 932
Query: 2171 STW 2173
W
Sbjct: 933 ENW 935
>gi|354580239|ref|ZP_08999144.1| DNA polymerase I [Paenibacillus lactis 154]
gi|353202670|gb|EHB68119.1| DNA polymerase I [Paenibacillus lactis 154]
Length = 885
Score = 229 bits (585), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 237/466 (50%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ L + K L E++ ++E+PL +LADME GI V++E +
Sbjct: 456 MARKCLAAAQLIPLQEKELADNEMLPLFYDLEMPLSRILADMEKQGIAVNVEDLKELGRE 515
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+ ++ L ++ Y +AG +F+L + + +L+ L+LP+ + K K STD L+
Sbjct: 516 FEAQIERLVQEIYEIAGTEFNLNSPKQLGEILFVKLQLPVIK---KTKTGYSTDAEVLEK 572
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV +I ++RTLAKL + + + L IS T K +H ++ QT ATGRLS +
Sbjct: 573 LAPYHDIVRLILQYRTLAKLQSTYVEGL--LKEISGKTGK--VHTYYRQTIAATGRLSSQ 628
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
PNLQ + +E + K+ R F+PS+ W +LAADYSQIELR++
Sbjct: 629 YPNLQNIPIRLE---------------EGRKL--RKVFVPSEPGWSILAADYSQIELRVL 671
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D L D+ T A G D V + R K + +GI+YG+ L
Sbjct: 672 AHISDDERLKEAFLHDM-DIHTKTAMDVFGVGVDEVDANMRRSAKAVNFGIVYGISDYGL 730
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S+ LN + EA I + F GV ++ V Q GYV++L R+R+L +I N
Sbjct: 731 SQNLNITRKEAAAFIDQYFEVFQGVRRYMDEIVKEAKQNGYVKTLLERRRYLPEINASNF 790
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK+AM++ + A Q K + R+LL
Sbjct: 791 NLRSFAERTAMNTPIQGTAADIIKLAMVH---------------MDAALQERKLKSRMLL 835
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDELV EV ++ LV + M A L VPL ++ G+ W
Sbjct: 836 QVHDELVFEVPEDELEIMKELVPEVMSHALALSVPLKSEVSYGTNW 881
>gi|152977709|ref|YP_001343338.1| DNA polymerase I [Actinobacillus succinogenes 130Z]
gi|150839432|gb|ABR73403.1| DNA polymerase I [Actinobacillus succinogenes 130Z]
Length = 956
Score = 229 bits (585), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 171/593 (28%), Positives = 284/593 (47%), Gaps = 81/593 (13%)
Query: 1588 RIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPV 1647
R+ ++E D+RK N+K + + + + +Q G +F
Sbjct: 434 RLKPVLENADIRKIGQNLKYDLTIFANHGIQVQ-----------------GVAF------ 470
Query: 1648 HLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------ 1701
D + S++L + N++ ++ L + + +G+ KNQ+
Sbjct: 471 ------DTMLESYVL----NSTGRHNMDDLAERYLGHQTISFETLAGKGKNQLTFDKIPL 520
Query: 1702 RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEG 1760
A T L LW L + L +IE+PLV+VL+ +E G+ +D +
Sbjct: 521 AQAAEYAAEDADVTMKLHQTLWAELEKTPTLTTLFKDIELPLVSVLSRIERNGVLIDAQA 580
Query: 1761 CLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPST 1820
+ ++L LE KA+ +AG F+L + + +L+ L LP+ + KG PST
Sbjct: 581 LRKQSQEFGERLTALEAKAHEIAGEAFNLASPKQLQEILFNKLHLPVLQKTPKGD--PST 638
Query: 1821 DKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTA 1880
+ L+ L +H + ++ EHR LAKL + + + ++ +H + Q TA
Sbjct: 639 KEEVLEELAFDHELPKLLVEHRGLAKLKSTYTDKLPQM----INPHTGRVHTSYHQAVTA 694
Query: 1881 TGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYS 1940
TGRLS +PNLQ + + NE+ G R F+ +++ + ++AADYS
Sbjct: 695 TGRLSSTDPNLQNI------PIRNEE---GR--------RIRQAFV-ARDGYRIIAADYS 736
Query: 1941 QIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILY 2000
QIELR+MAH S D L + D+ A+ G + V +++R K + +G++Y
Sbjct: 737 QIELRIMAHLSGDKGLTTAFVEGR-DIHRSTASEIFGIPLEDVSAEQRRSAKAINFGLIY 795
Query: 2001 GMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLS 2060
GM LS QL S EAK+ + + +P V +++H +G+VE+L GR+ +L
Sbjct: 796 GMSAFGLSRQLAISRMEAKKYMDLYFQRYPNVQTFMHDIQEKAKAQGFVETLFGRRLYLP 855
Query: 2061 KIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLK 2120
IK GN + A+R A+N+ QG+AADIIK AMI+I +I G D +
Sbjct: 856 DIKSGNASRRKGAERVAINAPMQGTAADIIKRAMIDIDHVIAG-----DEDIL------- 903
Query: 2121 GRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV ++ L+++ ME+AA L VPL+V+ VG+ W
Sbjct: 904 ----MIMQVHDELVFEVRSEKVEFYSELIKQKMETAAQLDVPLIVEAGVGANW 952
>gi|28198313|ref|NP_778627.1| DNA polymerase I [Xylella fastidiosa Temecula1]
gi|182680952|ref|YP_001829112.1| DNA polymerase I [Xylella fastidiosa M23]
gi|386084472|ref|YP_006000754.1| DNA polymerase I [Xylella fastidiosa subsp. fastidiosa GB514]
gi|417558861|ref|ZP_12209820.1| DNA polymerase I [Xylella fastidiosa EB92.1]
gi|28056383|gb|AAO28276.1| DNA polymerase I [Xylella fastidiosa Temecula1]
gi|182631062|gb|ACB91838.1| DNA polymerase I [Xylella fastidiosa M23]
gi|307579419|gb|ADN63388.1| DNA polymerase I [Xylella fastidiosa subsp. fastidiosa GB514]
gi|338178443|gb|EGO81429.1| DNA polymerase I [Xylella fastidiosa EB92.1]
Length = 923
Score = 229 bits (585), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 227/459 (49%), Gaps = 40/459 (8%)
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
R C + KLL L IE+PLV VL +E G+ +D E + L +++
Sbjct: 500 RLHCVLAPKLLAEPRLERVYREIEMPLVAVLERIEANGVQIDAEELYKQSADLSRRMVIA 559
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
++KA LAG F+L + + +L+ LKLP+ KG+ PST++ L+ + +H +
Sbjct: 560 QQKAMDLAGRHFNLDSPKQLQVLLFDELKLPVVVKTPKGQ--PSTNEEALEAIVDQHALP 617
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
VI E+R+LAKL N + + + +H ++ Q ATGRLS +PNLQ +
Sbjct: 618 RVILEYRSLAKLRNTYTEKLPEM----IHPHTGRVHTNYHQAGAATGRLSSSDPNLQNIP 673
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
D + R F PS L+A DYSQIELR+MAH S D
Sbjct: 674 ----------------IRTDDGRRIRRAFVAPSGRK--LIACDYSQIELRIMAHLSGDAG 715
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ DV IAA GR D V ER K + +G++YGM L+ QL S
Sbjct: 716 LVDAFES-GVDVHCAIAAEVFGRGIDEVTPNERRAAKAINFGLIYGMSAFGLARQLGISR 774
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
EA++ I + F GV ++ +GYVE++ GR+ +L+ I GN +++ A+R
Sbjct: 775 GEAQDYIALYFDRFAGVRDFMENTRQQARDRGYVETVFGRRLYLNSIASGNQTQRAGAER 834
Query: 2076 QAVNSICQGSAADIIKIAMINIHSII-VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
A+N+ QG+AADIIK AM+ + + VGG + R ++LQVHDELV
Sbjct: 835 AAINAPMQGTAADIIKRAMVAVDGWLGVGG--------------HRERALMILQVHDELV 880
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E D + V V M +AA L VPL+V + VG W
Sbjct: 881 FEADEGFVPTLVHEVSARMAAAAQLRVPLVVDVGVGHHW 919
>gi|198274096|ref|ZP_03206628.1| hypothetical protein BACPLE_00233 [Bacteroides plebeius DSM 17135]
gi|198273174|gb|EDY97443.1| DNA-directed DNA polymerase [Bacteroides plebeius DSM 17135]
Length = 931
Score = 229 bits (585), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/524 (31%), Positives = 252/524 (48%), Gaps = 42/524 (8%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKK---RLSSEAAAAANRSGRWKNQMRRAAHNGCC 1709
D I ++L P+ + E +K ++ A + G ++ A + C
Sbjct: 443 FDTMIAHYVLQPELRHGMDYLAEIYLKYETIKIEELIGAKGKKQGNMRDLAPEAVYKYAC 502
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
T L VL L + + + IE+PLV VLA ME G+ +D E +
Sbjct: 503 EDADVTLKLKQVLENELETNGVKKLFEEIEMPLVPVLAYMERNGVRIDTEALKETSRHFT 562
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
++ +E++ + LAGM+F++ + + VL+ LK+ K Q+ T + L+ LR
Sbjct: 563 ARMNQIEEEVHQLAGMEFNIASPKQVGEVLFDRLKIVEKAKKTKTGQY-VTSEEVLESLR 621
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
+H IV I EHR L KLL + ++ L I+ +T + +H + QT TATGRLS P
Sbjct: 622 GKHEIVGKILEHRGLKKLLGTYIDALPQL--INPATGR--IHTSFNQTVTATGRLSSSNP 677
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
NLQ + + NED E+ R FIP E +ADYSQIELR+MAH
Sbjct: 678 NLQNI------PIRNED----GKEI-------RKAFIPD-EGCEFFSADYSQIELRIMAH 719
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
S DP +I K D+ AA+ + V ++R + K +GI+YG+ L+E
Sbjct: 720 LSNDPHMIEAFQKDQ-DIHAATAAKIYKVKLEEVTREQRSKAKTANFGIIYGISVFGLAE 778
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
+LN EAK I + ++P V +++ ++ +KGY+E++ RKR+L I N
Sbjct: 779 RLNVDRKEAKALIDGYFENYPNVKAYMDQSIQEAREKGYIETIFKRKRYLPDINSKNAVV 838
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
+ A+R A+N+ QGSAADIIK+AMI I+ FQ R +++LQV
Sbjct: 839 RGYAERNAINAPIQGSAADIIKVAMIRIYQ---------------RFQEEGIRSKMILQV 883
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDEL V P ++ +V ME+A + PL G W
Sbjct: 884 HDELNFSVLPEEKEKVQQIVISEMEAAYKMKAPLRADHGWGHNW 927
>gi|387819294|ref|YP_005679641.1| DNA polymerase I [Clostridium botulinum H04402 065]
gi|322807338|emb|CBZ04912.1| DNA polymerase I [Clostridium botulinum H04402 065]
Length = 875
Score = 229 bits (585), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 243/456 (53%), Gaps = 41/456 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L VL + + +++ E L +E PL L+ ME G VD + LQ + ++ +
Sbjct: 457 LYKVLEEKIKEQDMEELLYKVEQPLTETLSAMETEGFKVDKDILLQLEKKFKGEIESTQL 516
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ Y+++ +F++ + + +L+ L LP+ + K K ST+ LD LR +HPI+
Sbjct: 517 EIYSMSEEEFNINSPKQLGKILFEKLDLPVIK---KTKTGYSTNAEVLDKLRDKHPIIDK 573
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I +R L K+ + + + A I + +H ++ QT TATGRLS EPNLQ +
Sbjct: 574 ITYYRQLTKIYSTYIEGLK--AAIDEDGK---IHSNFNQTVTATGRLSSTEPNLQNIP-- 626
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
++++M E R FIP+ + ++L+ADYSQIELR++AH S D +I
Sbjct: 627 IKYEMGRE---------------IRKVFIPNTGDSVILSADYSQIELRVLAHISDDKNMI 671
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
++ H D+ T A+ + V R K + +GI+YG+G +LS+ LN + E
Sbjct: 672 SAFNE-HDDIHTKTASEVFKVPIEEVTPLMRGNAKAVNFGIVYGIGDFSLSQDLNITRKE 730
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
AK+ I ++ +P V +L V +KGYV ++ R+R++ ++K N K+ +R A
Sbjct: 731 AKQYIDAYLERYPNVKLYLENIVEEAIEKGYVSTILNRRRYIKEVKSSNKIVKAAGERLA 790
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+NS QGSAADIIK+AM+N+H + K D NF + ++LQVHDEL+L V
Sbjct: 791 MNSPIQGSAADIIKLAMVNVHRKL-----KED-----NF-----KSSIILQVHDELILNV 835
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++ +LV+K ME L V L V I +G+ W
Sbjct: 836 HKDELEKIKALVKKEMEQVLELKVGLDVDINIGNNW 871
>gi|170758638|ref|YP_001788325.1| DNA polymerase I [Clostridium botulinum A3 str. Loch Maree]
gi|169405627|gb|ACA54038.1| DNA polymerase I [Clostridium botulinum A3 str. Loch Maree]
Length = 875
Score = 229 bits (585), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 243/456 (53%), Gaps = 41/456 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L VL + + +++ E L +E PL L+ ME G VD + LQ + ++ +
Sbjct: 457 LYKVLEEKIKDQDMEELLYKVEQPLTETLSAMETEGFKVDKDILLQLEKKFKGEIESTQL 516
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ Y+++ +F++ + + +L+ L LP+ + K K ST+ LD LR +HPI+
Sbjct: 517 EIYSMSEEEFNINSPKQLGKILFEKLDLPVIK---KTKTGYSTNAEVLDKLRDKHPIIDK 573
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I +R L K+ + + + A I + +H ++ QT TATGRLS EPNLQ +
Sbjct: 574 ITYYRQLTKIYSTYIEGLK--AAIDEDGK---IHSNFNQTVTATGRLSSTEPNLQNIP-- 626
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
++++M E R FIP+ + ++L+ADYSQIELR++AH S D +I
Sbjct: 627 IKYEMGRE---------------IRKVFIPNTGDSVILSADYSQIELRVLAHISDDKNMI 671
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
++ H D+ T A+ + V R K + +GI+YG+G +LS+ LN + E
Sbjct: 672 SAFNE-HDDIHTKTASEVFKVPIEEVTPLMRSNAKAVNFGIVYGIGDFSLSQDLNITRKE 730
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
AK+ I ++ +P V +L V +KGYV ++ R+R++ ++K N K+ +R A
Sbjct: 731 AKQYIDAYLERYPNVKLYLENIVEEAVEKGYVSTILNRRRYIKEVKSSNKIVKAAGERLA 790
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+NS QGSAADIIK+AM+N+H + K D NF + ++LQVHDEL+L V
Sbjct: 791 MNSPIQGSAADIIKLAMVNVHRKL-----KED-----NF-----KSSIILQVHDELILNV 835
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++ +LV+K ME L V L V I +G+ W
Sbjct: 836 YKDELEKIKALVEKEMEQVLELKVGLDVDINIGNNW 871
>gi|335040619|ref|ZP_08533744.1| DNA polymerase I [Caldalkalibacillus thermarum TA2.A1]
gi|334179483|gb|EGL82123.1| DNA polymerase I [Caldalkalibacillus thermarum TA2.A1]
Length = 881
Score = 229 bits (585), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/444 (35%), Positives = 236/444 (53%), Gaps = 41/444 (9%)
Query: 1731 LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG-MKFSL 1789
L+ ++E+PL ++L DMEL GI VD + L++++ L K+ Y LAG ++F++
Sbjct: 474 LLSLFEDLELPLSHILGDMELHGIKVDQGRLKKMGEDLKERIETLTKEIYELAGGVEFNI 533
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
+ + +L+ L LP+ + K K ST L+ L +H IV I ++R L KL
Sbjct: 534 NSPKQLGEILFDKLGLPVIK---KTKTGYSTSADVLEKLAPQHEIVSKILDYRQLVKLQT 590
Query: 1850 CTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG 1909
+ + L I+ T K +H + QT TATGRLS +PNLQ + +E
Sbjct: 591 TYIEGL--LKEINEQTGK--VHTTFQQTITATGRLSSTDPNLQNIPIRLE---------- 636
Query: 1910 GNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFT 1969
+ KI R F+PS+E+ ++LAADYSQIELR++AH S+D L+ + D+ T
Sbjct: 637 -----EGRKI--RQAFVPSREDQVILAADYSQIELRILAHLSQDQGLVEAFRQGE-DIHT 688
Query: 1970 MIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSF 2029
A D V R Q K + +GI+YG+ LS+ LN S EAK I+ + +S+
Sbjct: 689 KTAMDVFHVKRDEVTPLMRRQAKAVNFGIIYGISDYGLSQNLNISRKEAKAFIERYFASY 748
Query: 2030 PGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADI 2089
PGV +++ V + GYV +L R+R++ +I N +S A+R A+N+ QG+AADI
Sbjct: 749 PGVKAYMDQIVKKAREDGYVTTLLHRRRYIPEINSCNFNLRSFAERTAMNTPIQGTAADI 808
Query: 2090 IKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLV 2149
IK AM+ I A + + +LLLQVHDELV EV S ++ + LV
Sbjct: 809 IKKAMVEI---------------AERLKEEQLSSKLLLQVHDELVFEVPKSELETMMELV 853
Query: 2150 QKCMESAALLLVPLLVKIQVGSTW 2173
+ MES L VPL V + G TW
Sbjct: 854 PQVMESTITLAVPLKVDLAYGPTW 877
>gi|148380963|ref|YP_001255504.1| DNA polymerase I [Clostridium botulinum A str. ATCC 3502]
gi|153933368|ref|YP_001385333.1| DNA polymerase I [Clostridium botulinum A str. ATCC 19397]
gi|153935166|ref|YP_001388741.1| DNA polymerase I [Clostridium botulinum A str. Hall]
gi|148290447|emb|CAL84575.1| DNA polymerase I [Clostridium botulinum A str. ATCC 3502]
gi|152929412|gb|ABS34912.1| DNA polymerase I [Clostridium botulinum A str. ATCC 19397]
gi|152931080|gb|ABS36579.1| DNA polymerase I [Clostridium botulinum A str. Hall]
Length = 875
Score = 229 bits (584), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 243/456 (53%), Gaps = 41/456 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L VL + + +++ E L +E PL L+ ME G VD + LQ + ++ +
Sbjct: 457 LYKVLEEKIKEQDMEELLYKVEQPLTETLSAMETEGFKVDKDILLQLEKKFKGEIESTQL 516
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+ Y+++ +F++ + + +L+ L LP+ + K K ST+ LD LR +HPI+
Sbjct: 517 EIYSMSEEEFNINSPKQLGKILFEKLDLPVIK---KTKTGYSTNAEVLDKLRDKHPIIDK 573
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I +R L K+ + + + A I + +H ++ QT TATGRLS EPNLQ +
Sbjct: 574 ITYYRQLTKIYSTYIEGLK--AAIDEDGK---IHSNFNQTVTATGRLSSTEPNLQNIP-- 626
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
++++M E R FIP+ + ++L+ADYSQIELR++AH S D +I
Sbjct: 627 IKYEMGRE---------------IRKVFIPNTGDSVILSADYSQIELRVLAHISDDKNMI 671
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
++ H D+ T A+ + V R K + +GI+YG+G +LS+ LN + E
Sbjct: 672 SAFNE-HDDIHTKTASEVFKVPIEEVTPLMRGNAKAVNFGIVYGIGDFSLSQDLNITRKE 730
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
AK+ I ++ +P V +L V +KGYV ++ R+R++ ++K N K+ +R A
Sbjct: 731 AKQYIDAYLERYPNVKLYLENIVEEAIEKGYVSTILNRRRYIKEVKSSNKIVKAAGERLA 790
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+NS QGSAADIIK+AM+N+H + K D NF + ++LQVHDEL+L V
Sbjct: 791 MNSPIQGSAADIIKLAMVNVHRKL-----KED-----NF-----KSSIILQVHDELILNV 835
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++ +LV+K ME L V L V I +G+ W
Sbjct: 836 HKDELEKIKALVKKEMEQVLELKVGLDVDINIGNNW 871
>gi|410668137|ref|YP_006920508.1| DNA polymerase I [Thermacetogenium phaeum DSM 12270]
gi|409105884|gb|AFV12009.1| DNA polymerase I [Thermacetogenium phaeum DSM 12270]
Length = 875
Score = 229 bits (584), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 172/523 (32%), Positives = 258/523 (49%), Gaps = 56/523 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVA 1713
D + +++L P S+P LE+ V K L + + ++ RAA C R +
Sbjct: 401 DTMLAAYLLNPS---LSSPALEEIVLKYLGQVVS--------FDREVTRAAR--CARAIW 447
Query: 1714 QTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
+ + VL L +EL E ++E+PL VLA MEL G+ +D+ + K L
Sbjct: 448 K---VWPVLRTSLERDELWELFSSLELPLSGVLARMELTGVRLDVAQLEEMSREFGKHLA 504
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
L + Y LAG F++ + + +L+ LKLP+ + G STD LD L H
Sbjct: 505 NLVGEIYALAGEGFNINSPKQLGYILFEKLKLPVIKRTKTGY---STDAEVLDKLAPYHE 561
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
I + E+R AKL + + + L + T K +H + QT TATGRLS EPNLQ
Sbjct: 562 IAGKLLEYRQFAKLKSTYVDGLQGL--VDRETGK--VHTTFNQTITATGRLSSTEPNLQN 617
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ KM G ++ R F+PS+ W++LAADYSQIELR++AH S+D
Sbjct: 618 IP----IKM------GPGRKI-------RRAFVPSEPGWLILAADYSQIELRVLAHMSRD 660
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
LI D+ T AA G + + V R + K + YGI+YG+ L+ +
Sbjct: 661 ERLIADFLNGE-DIHTRTAATVFGVAPEEVTPDLRRRAKGINYGIVYGITEYGLARDIGV 719
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
S EA I ++ +PGV ++ +++ ++GYV++L R+R+L + N +S
Sbjct: 720 SREEAALYIANYFRQYPGVKRFIEETIAAARERGYVQTLLKRRRYLPDLLSSNRNVRSFG 779
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QGSAADIIK+AM+ + + R R++LQVHDEL
Sbjct: 780 ERTAINTPIQGSAADIIKLAMLRVDR---------------EMRERGLRARMILQVHDEL 824
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
V E+ + V LV+ ME L VPL V I+VG W L
Sbjct: 825 VFELPKEELGVLVPLVRSGMEKIMELAVPLRVDIEVGPNWYDL 867
>gi|145346862|ref|XP_001417901.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578129|gb|ABO96194.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 671
Score = 229 bits (584), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 225/459 (49%), Gaps = 35/459 (7%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
++E + L ++ G+G D + R +++ LE++A G+ +L +A +A
Sbjct: 239 DVEAKVAVALGVLQHHGVGFDRTRADEQRRAANRRVEELEREAQKCIGVDINLASAQQVA 298
Query: 1797 NVLYGHLKLPIPEGHN-KGKQ--HPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLG 1853
+VLY LKLP P H KG + H ST L L H ++ HR L +
Sbjct: 299 DVLYNKLKLPTPSAHAMKGSKSSHLSTSVEVLQSLVKHHHFAQIVLNHR--GALKERAMC 356
Query: 1854 SICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAE 1913
+ + + + +H W T TATGRLS PN+Q V G
Sbjct: 357 DNYDKSAVIAADGRARIHTQWNNTKTATGRLSSSHPNIQQV---------------GRGT 401
Query: 1914 VDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAA 1973
+ +C F P+ +I AADYSQIELR++AH S D LI LL + GDVF I
Sbjct: 402 MRNC------FVAPTGRTFI--AADYSQIELRVLAHLSGDDRLISLLRQAKGDVFVAIWN 453
Query: 1974 RWTGRSEDSVGSQE-RDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGV 2032
G D+ + RD KR YGI+YG L+E+L +EA+ I +F +FP V
Sbjct: 454 AGKGLPLDAPAEKSTRDIAKRTAYGIVYGQHATGLAEKLGVPKSEAQGYIAAFHRAFPKV 513
Query: 2033 ASWLHVAVSSCHQKGYVE-SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIK 2091
W+ + Q G V + GR R L KI E+S+AQRQAVN+I QG+AAD++K
Sbjct: 514 NQWITRVLQRAEQTGAVTLPMSGRHRALPKIHSKVFSERSEAQRQAVNTIIQGTAADMMK 573
Query: 2092 IAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQK 2151
AM+ S + G + D A + K R L+ Q+HDEL+ EVD + E V+
Sbjct: 574 TAMLRWTSAVGAGRFAND---VAPGSVNKKRVTLVAQIHDELLFEVDEDYVPECARAVKN 630
Query: 2152 CMESAALLLVPLLVKIQVGSTWGSL--EPFQADNYTNVV 2188
ME+A L VP +K+ VG++WG L E D T+++
Sbjct: 631 VMENAIKLAVPTPIKLAVGTSWGELREEDSAVDEATHLI 669
>gi|168181699|ref|ZP_02616363.1| DNA-directed DNA polymerase [Clostridium botulinum Bf]
gi|237796465|ref|YP_002864017.1| DNA polymerase I [Clostridium botulinum Ba4 str. 657]
gi|182675010|gb|EDT86971.1| DNA-directed DNA polymerase [Clostridium botulinum Bf]
gi|229261470|gb|ACQ52503.1| DNA polymerase I [Clostridium botulinum Ba4 str. 657]
Length = 875
Score = 229 bits (584), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 151/465 (32%), Positives = 245/465 (52%), Gaps = 41/465 (8%)
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
+ V L VL + + +++ E L +E PL L+ ME G VD + LQ
Sbjct: 448 IKEVNMMPKLYKVLEEKIKEQDMEELLYKVEQPLTETLSAMETEGFKVDKDILLQLEKKF 507
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
+ ++ + + Y+++ +F++ + + +L+ L LP+ + K K ST+ LD L
Sbjct: 508 KGEIESTQLEIYSMSEEEFNINSPKQLGKILFEKLDLPVIK---KTKTGYSTNAEVLDKL 564
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
R +HPI+ I +R L K+ + + + A I + +H ++ QT TATGRLS E
Sbjct: 565 RDKHPIIDKITYYRQLTKIYSTYIEGLK--AAIDEDGK---IHSNFNQTVTATGRLSSTE 619
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + ++++M E R FIP+ + ++L+ADYSQIELR++A
Sbjct: 620 PNLQNIP--IKYEMGRE---------------IRKVFIPNTGDSVILSADYSQIELRVLA 662
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H S D +I ++ H D+ T A+ + V R K + +GI+YG+G +LS
Sbjct: 663 HISDDKNMISAFNE-HDDIHTKTASEVFKVPIEEVTPLMRGNAKAVNFGIVYGIGDFSLS 721
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
+ LN + EAK+ I ++ +P V +L V +KGYV ++ R+R++ ++K N
Sbjct: 722 QDLNITRKEAKQYIDAYLERYPNVKLYLENIVEEAVEKGYVNTILNRRRYIKEVKSSNKI 781
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
K+ +R A+NS QGSAADIIK+AM+N+H + K D NF + ++LQ
Sbjct: 782 VKAAGERLAMNSPIQGSAADIIKLAMVNVHRKL-----KED-----NF-----KSSIILQ 826
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VHDEL+L V +++ +LV+K ME L V L V I +G+ W
Sbjct: 827 VHDELILNVYKDELEKIKALVKKEMEQVLELKVGLDVDINIGNNW 871
>gi|392555749|ref|ZP_10302886.1| DNA polymerase I [Pseudoalteromonas undina NCIMB 2128]
Length = 911
Score = 229 bits (584), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 240/461 (52%), Gaps = 42/461 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VLW KL E+L NIE+PLV+V++D+E G+ +D L ++L
Sbjct: 487 TLRLHQVLWPKLEADEKLKSVFENIEMPLVSVISDIERTGVAIDSNMLATHSQRLGERLL 546
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LEK+A+ +AG F+L + + +L+ L+LP+ + KG PST + L L H++P
Sbjct: 547 ELEKEAFEIAGEPFNLSSPKQLQVLLFEKLELPVIKKTPKGA--PSTAEEVLQELAHDYP 604
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI EHR L+KL + + + ++ Q +H + Q TATGRLS +PNLQ
Sbjct: 605 LPKVIIEHRGLSKLKSTYTDKLP----LIVNEQTKRVHTSYHQAVTATGRLSSSDPNLQN 660
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E + +I R+ FI + + + ++AADYSQIELR+MAH S+D
Sbjct: 661 IPIRSE---------------EGRRI--REAFI-AADGYKIVAADYSQIELRIMAHLSQD 702
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
L+ + +G DV + AA G + + S R + K + +G++YGM L+ QL+
Sbjct: 703 KGLLNAFA--NGLDVHSATAAEVFGVELEEITSDMRRKAKAVNFGLIYGMSAFGLARQLD 760
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+EA+ I + FPGV ++ + GYVE++ GR+ L +I N +
Sbjct: 761 VPRHEAQHYIDKYFERFPGVLEYMETTREKAAENGYVETIFGRRLHLPEINARNGARRKG 820
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK AM+ +H+ + Q +LL+QVHDE
Sbjct: 821 AERAAINAPMQGTAADIIKKAMLTVHAWVN--------------QQAPNTVKLLMQVHDE 866
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV E+ ++ + + M AA L VPL+V+ G W
Sbjct: 867 LVFEIKTECTEQYTQQICELMSQAAQLDVPLIVEADEGDNW 907
>gi|327310021|ref|YP_004336918.1| ATP-dependent, DNA binding helicase [Thermoproteus uzoniensis 768-20]
gi|326946500|gb|AEA11606.1| ATP-dependent, DNA binding helicase [Thermoproteus uzoniensis 768-20]
Length = 716
Score = 229 bits (584), Expect = 1e-56, Method: Composition-based stats.
Identities = 230/794 (28%), Positives = 360/794 (45%), Gaps = 136/794 (17%)
Query: 503 LDLSSW-LPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEIL 561
+D+SS +P + ++RG+ +LYP Q + G+L+ N+V +T++GK+ +AE+
Sbjct: 1 MDVSSLPIPPGLRDALRRRGVERLYPPQEAAVRA-GILEGANVVMTTATASGKTLLAEVA 59
Query: 562 MLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQ-----GGGSLPKD 616
++ + G+MA+ +P ++ EK H SYYG+ G D
Sbjct: 60 AVKTALE-GRMAVFTVPLKALAYEKQLHF------------SYYGDLVDVAVSTGEYDSD 106
Query: 617 TS------VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKL 670
+ V + T EK +SL+ L+++G+I +DE+H V D RG +LE + K+
Sbjct: 107 DAWLHKYDVVITTYEKLDSLLRH--RPSWLNKVGLIALDEIHYVGDPKRGPVLESIAAKV 164
Query: 671 RYAAGEGTSDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRP 730
+Y + QIV +SAT+ N A+A WL A L ++++RP
Sbjct: 165 KYLGLKA-----------------------QIVALSATIGNPEALAKWLGARLVKSDWRP 201
Query: 731 VPLEEYIKVGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRK 790
VPL E + AI V R I G DP+ V L + V+ G L+F +SR
Sbjct: 202 VPLMEGVYADGAIQYADGSV-RHIPK-----GADPE--VALALDAVENGGQALVFVNSRS 253
Query: 791 GCESTARHVSKFLKKFSINVHSSDSEFIDITSAID-ALRRCPAGLDPV----LEETLPSG 845
STAR +++ V + ID +A D A + A + L E + G
Sbjct: 254 ATVSTARRIAE-------AVAAGGRRLIDPEAAADLAAKVEEAAASKIIGRELAEVVARG 306
Query: 846 VAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQ-----PRIGRD 900
VA+H+AGL +E R +VE +RKG+++V+ +T+TLAAGVNLPARRV+ + P G +
Sbjct: 307 VAFHNAGLELELRRIVEEGFRKGVIKVVVSTTTLAAGVNLPARRVVIAELRRYDPLTGVE 366
Query: 901 FIDGTRYRQMAGRAGRTGIDTKGESMLICKPE-EVKKIMG-LLNESCPPLHSCLSEDKNG 958
I YRQMAGRAGR G+D GE++ I E E + IM + + P+ S L D N
Sbjct: 367 EIPVMEYRQMAGRAGRPGLDPYGEAVAIASSEREAEYIMERYIKGAIEPVRSQLFSDVNL 426
Query: 959 MTHAILEVVAGGIVQTAEDIHRYVRCTL--LNSTKPFQDVVKS-AQDSLRWLCHRKFLEW 1015
+H +L VV G T ++I Y+ TL + + +S A+ +L L FLE
Sbjct: 427 RSH-LLGVVGSGYANTEDEIVDYLSATLAYIQLGPAAMSIARSKAERALDQLVAWGFLE- 484
Query: 1016 NEDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVE 1075
+ Y TPLGR + PE + + DL +A G + +++V S EV
Sbjct: 485 -KAGGAYHATPLGRLVSRLYVDPETAATYI-DLLKAMRGDSPVAYIYIVAASP----EVP 538
Query: 1076 PDWELYYERFLELSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLHGKLEYR 1135
W LD+ + ++ S P L P+ E+R
Sbjct: 539 KIWR---------GRLDKKIAAEIARSFPDL-------PLDEEDD------------EFR 570
Query: 1136 LGITSNNMLSDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRF 1195
QT++ + +L E P ++ E + V G V+ +
Sbjct: 571 ------------QTVKTVQ------MLWEWANEAPEDKIYEKYGVGPGDVRVYADLFEWL 612
Query: 1196 ASMVSVFCERLGWYDLEGLIAKFQNRVSFGVRAEIVEL-TTIPYVKGSRARALYKAGLRT 1254
+ S +G + RV +GVR E++EL + V RAR LY+AG RT
Sbjct: 613 GTAASKLAAAVGLPQRAEGALRATYRVVYGVREELLELVVNLRGVGRVRARTLYQAGYRT 672
Query: 1255 PLAIAEASISEIVK 1268
+A A ++I +
Sbjct: 673 LADVARAKPADIAR 686
>gi|299688943|pdb|3HPO|A Chain A, Crystal Structure Of Fragment Dna Polymerase I From Bacillus
Stearothermophilus Y714s Mutant Bound To G:t Mismatch
Length = 580
Score = 229 bits (584), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 157/439 (35%), Positives = 229/439 (52%), Gaps = 40/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L+ +E PL ++LA+ME G+ VD + Q L ++L +E++ Y LAG +F++ +
Sbjct: 178 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQ 237
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L+LP+ K K ST L+ L H IV I +R L KL + +
Sbjct: 238 LGVILFEKLQLPV---LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEG 294
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ + R T+K +H + Q T TGRLS EPNLQ + +E
Sbjct: 295 LLKVVR--PDTKK--VHTIFNQALTQTGRLSSTEPNLQNIPIRLE--------------- 335
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
+ KI R F+PS+ +W++ AADYSQIELR++AH ++D L+ + D+ T A
Sbjct: 336 EGRKI--RQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRR-DLDIHTKTAMD 392
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
SED V R Q K + +GI+ G+ L++ LN S EA E I+ + SFPGV
Sbjct: 393 IFQVSEDEVTPNMRRQAKAVNFGIVSGISDYGLAQNLNISRKEAAEFIERYFESFPGVKR 452
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ V QKGYV +L R+R+L I N +S A+R A+N+ QGSAADIIK AM
Sbjct: 453 YMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAM 512
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I+++ A + + + LLLQVHDEL+LE ++ LV + ME
Sbjct: 513 IDLN---------------ARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVME 557
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
A L VPL V GSTW
Sbjct: 558 QAVTLRVPLKVDYHYGSTW 576
>gi|310641223|ref|YP_003945981.1| DNA polymerase i [Paenibacillus polymyxa SC2]
gi|386040274|ref|YP_005959228.1| DNA polymerase I [Paenibacillus polymyxa M1]
gi|309246173|gb|ADO55740.1| DNA polymerase I [Paenibacillus polymyxa SC2]
gi|343096312|emb|CCC84521.1| DNA polymerase I [Paenibacillus polymyxa M1]
Length = 884
Score = 229 bits (584), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 175/543 (32%), Positives = 264/543 (48%), Gaps = 56/543 (10%)
Query: 1633 GLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSS--EAAAAA 1690
G+E G+ F D+ + ++L P D + L K LSS
Sbjct: 392 GIEFAGAEF------------DVQLAGYLLDPTDANQTLSGLA--AKYGLSSIRPDDEVF 437
Query: 1691 NRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADME 1750
+ ++K + R+ A AL V L E+ + +E+PL +LADME
Sbjct: 438 GKGAKYKVPEMDVLSDHVARKAAVIEALVPVQQAELEKTEMHKLFHELEMPLSRILADME 497
Query: 1751 LWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEG 1810
GI V++E + ++ L + Y++AG++F+L + + +L+ L LP+ +
Sbjct: 498 KQGILVNVEELRALGKEFEAQIATLVGEIYSIAGVEFNLNSPKQLGEILFDKLGLPVIK- 556
Query: 1811 HNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTL 1870
K K STD L+ L H IV I ++RT+AKL + + + L IS T K +
Sbjct: 557 --KTKTGYSTDAEVLEKLAPYHDIVQNILQYRTIAKLQSTYVEGL--LKEISEKTGK--V 610
Query: 1871 HGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQE 1930
H ++ QT ATGRLS + PNLQ + +E + KI R F+PS+
Sbjct: 611 HTYFRQTVAATGRLSSQFPNLQNIPIRLE---------------EGRKI--RKVFVPSEP 653
Query: 1931 NWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQ 1990
W +LAADYSQIELR++A S D L D+ T A+ G ++V S R
Sbjct: 654 GWSILAADYSQIELRVLADISDDERLKEAFVHDM-DIHTKTASDVFGVPAEAVDSDMRRS 712
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +GI+YG+ LS+ LN + EA I + F GV ++ V + GYV+
Sbjct: 713 AKAVNFGIVYGISDYGLSQNLNITRKEAARFIDQYFDVFQGVRRYMDDIVKDAKRDGYVK 772
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R+L +I N ++S A+R A+N+ QG+AADIIK+AM+ + D+
Sbjct: 773 TLLERRRYLPEINASNFNQRSFAERTAMNTPIQGTAADIIKLAMVQM-----------DA 821
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
+L R R+LLQVHDELV EV P ++ LV ME+A L VPL ++ G
Sbjct: 822 ALRER----NLRSRMLLQVHDELVFEVPPEEMETMKELVPATMEAALKLAVPLKAEVSYG 877
Query: 2171 STW 2173
S W
Sbjct: 878 SNW 880
>gi|323141560|ref|ZP_08076445.1| DNA-directed DNA polymerase [Phascolarctobacterium succinatutens YIT
12067]
gi|322413972|gb|EFY04806.1| DNA-directed DNA polymerase [Phascolarctobacterium succinatutens YIT
12067]
Length = 878
Score = 229 bits (584), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 232/460 (50%), Gaps = 46/460 (10%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L S L LL ++ ++ E+PL VLA ME GI D E LQ + ++ LE
Sbjct: 459 LASKLRSLLAEQQQLKLYEEFELPLAPVLAQMEFAGITPDKELLLQLNEDMGHRIAKLEA 518
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
A AG +F+L + + +L+ L+LP+ + K K STD L+ L +HP++
Sbjct: 519 LAQEQAGEEFNLKSPKQLGVILFERLQLPVIK---KTKTGYSTDAKVLEALEGKHPLIAT 575
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I EHR LAKL + L + L ++ + +H H+ QT T TGRLS +PNLQ +
Sbjct: 576 ILEHRKLAKLQSTYLEGLQPL----INPKTGRIHTHFQQTVTVTGRLSSTDPNLQNIPAR 631
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
E R F+P +L++ DYSQ+ELR++A ++D L+
Sbjct: 632 TEESR-----------------QIRRIFVPGAGYDLLMSCDYSQVELRILACIAQDELLL 674
Query: 1958 GLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSN 2016
HG D+ AA G D V Q R + K + +GI+YG+ L++QL+
Sbjct: 675 EAFR--HGQDIHARTAAEVFGVPLDEVTPQMRSRAKAVNFGIVYGISDFGLAKQLDVGRK 732
Query: 2017 EAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQ 2076
EA I S+ + GV ++ V+ ++GYV +L GR+R+L +I+ N +S A+R
Sbjct: 733 EAAGYIASYFERYTGVKKYMEDIVAEAREQGYVSTLMGRRRYLPEIRSSNFNLRSFAERT 792
Query: 2077 AVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRC--RLLLQVHDELV 2134
A+N+ QG+AADI+K AMI + ++ K +C R+LLQVHDELV
Sbjct: 793 AINTPIQGTAADIMKKAMIAVQR-----------------ELDKAQCKSRILLQVHDELV 835
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
LEV ++ LV+ ME AA L +PLL + G W
Sbjct: 836 LEVTEDEKEQVAQLVRTAMEGAASLDIPLLADVNCGRDWA 875
>gi|71732582|gb|EAO34635.1| DNA polymerase A [Xylella fastidiosa subsp. sandyi Ann-1]
Length = 923
Score = 229 bits (584), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 227/459 (49%), Gaps = 40/459 (8%)
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
R C + KLL L IE+PLV VL +E G+ +D E + L +++
Sbjct: 500 RLHCVLAPKLLAEPRLERVYREIEMPLVAVLERIEANGVQIDAEELYKQSADLSRRMVIA 559
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
++KA LAG F+L + + +L+ LKLP+ KG+ PST++ L+ + +H +
Sbjct: 560 QQKAMDLAGRHFNLDSPKQLQVLLFDELKLPVVVKTPKGQ--PSTNEEALEAIVDQHALP 617
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
VI E+R+LAKL N + + + +H ++ Q ATGRLS +PNLQ +
Sbjct: 618 RVILEYRSLAKLRNTYTEKLPEM----IHPHTGRVHTNYHQAGAATGRLSSSDPNLQNIP 673
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
D + R F PS L+A DYSQIELR+MAH S D
Sbjct: 674 ----------------IRTDDGRRIRRAFVAPSGRK--LIACDYSQIELRIMAHLSGDAG 715
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ DV IAA GR D V ER K + +G++YGM L+ QL S
Sbjct: 716 LVDAFES-GVDVHCAIAAEVFGRGIDEVTPNERRAAKAINFGLIYGMSAFGLARQLGISR 774
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
EA++ I + F GV ++ +GYVE++ GR+ +L+ I GN +++ A+R
Sbjct: 775 GEAQDYIALYFDRFAGVRDFMENTRQQARDRGYVETVFGRRLYLNSIASGNQTQRAGAER 834
Query: 2076 QAVNSICQGSAADIIKIAMINIHSII-VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
A+N+ QG+AADIIK AM+ + + VGG + R ++LQVHDELV
Sbjct: 835 AAINAPMQGTAADIIKRAMVAVDGWLGVGG--------------HRERALMILQVHDELV 880
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E D + V V M +AA L VPL+V + VG W
Sbjct: 881 FEADEGFVPTLVHEVSARMAAAAQLRVPLVVDVGVGHHW 919
>gi|251771629|gb|EES52205.1| DNA polymerase I [Leptospirillum ferrodiazotrophum]
Length = 831
Score = 229 bits (584), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 222/454 (48%), Gaps = 48/454 (10%)
Query: 1728 SEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKF 1787
S E+ + L ++EIP+ ++ ME GI V + L+A+ +++K+ LE + Y AG F
Sbjct: 422 SLEMGDLLRSVEIPVARIIVGMEKAGIPVSLTRILEAKKTIEEKIAGLEAEIYREAGQTF 481
Query: 1788 SLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKL 1847
S+ + + VLYG L LP P KG PSTD+ L+ L HP+ +I R L K
Sbjct: 482 SILSPKQVGEVLYGRLGLPPPRRTGKGSGAPSTDEEALEGLAALHPLPKLILSFRQLRKF 541
Query: 1848 LNCTLGSICSLARISMSTQKYT---LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN 1904
L+ L + M + + LHG + QT ATGRLS PNLQ + E +
Sbjct: 542 LSTYL--------LPMEEGRGSDGRLHGQFNQTVAATGRLSSSRPNLQNIPARTELGLL- 592
Query: 1905 EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
V C F P + LL+ADYSQIELRL+AHFS DP L S+
Sbjct: 593 ---------VRRC------FVAP--QGGCLLSADYSQIELRLLAHFSGDPFLREAFSRGE 635
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
D+ AA G + V S+ R + K + +GILYGM +LS+ L EA+ I
Sbjct: 636 -DIHARTAALLFG---EPVTSESRRRAKTINFGILYGMSAYSLSQDLGVEPAEAQGIIDR 691
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
+ S GV + + G + +L GR R + +I+ N + +R AVNS+ QG
Sbjct: 692 YFSVVAGVGPYFEKIREEARRTGRIRTLLGRIRPIPEIRSDNRNVREYGERMAVNSVLQG 751
Query: 2085 SAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKE 2144
SAAD++K AM+++ + K RLLLQVHDEL+ EV +
Sbjct: 752 SAADLVKKAMVDLSQAVASSGLK---------------ARLLLQVHDELLFEVSEDQAES 796
Query: 2145 AVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEP 2178
++V+K ME A L VPL V I G+ W P
Sbjct: 797 LSAVVRKTMEGAIPLSVPLPVSIGRGADWVEAHP 830
>gi|330444881|ref|ZP_08308536.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489191|dbj|GAA03033.1| DNA polymerase I, 3' -- 5' polymerase, 5' -- 3' and 3' -- 5'
exonuclease [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 923
Score = 229 bits (584), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 253/497 (50%), Gaps = 43/497 (8%)
Query: 1680 KRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQ-TRALCSVLW-KLLVSEELIEALLN 1737
K +S E A + NQ+ A A T L + L+ K+ E+L
Sbjct: 463 KNISFEEIAGKGKKQLTFNQIDLAQAGPYAAEDADITLRLHNALYPKVEADEKLKHVFET 522
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IE+PLV VL+ ME G+ VD + +L LEKKA+ +A +F+L + +
Sbjct: 523 IEMPLVPVLSRMERTGVYVDSMLLGAQSTEIAARLDELEKKAFEIADQEFNLSSPKQLQA 582
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ + LP+ + G PST++ L L ++P+ +I E+R LAKL + +
Sbjct: 583 ILFEKMGLPVLKKTPSGT--PSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPK 640
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ +T + +H + Q TATGRLS +PNLQ + + NE+
Sbjct: 641 M--VNPATGR--VHTSYHQAVTATGRLSSSDPNLQNI------PVRNEE----------- 679
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F+ +Q + +LA DYSQIELR+MAH S D AL+ HG D+ AA
Sbjct: 680 GRRIRQAFV-AQSGYKILAVDYSQIELRIMAHLSGDKALLDAFR--HGKDIHAATAAEIL 736
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G + V S++R + K + +G++YGM L++QL+ NEA++ + + +PGV ++
Sbjct: 737 GLDIEQVSSEQRRRAKAINFGLIYGMSAFGLAKQLDMGRNEAQDYMNVYFERYPGVLEYM 796
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
++ +KGYVE+L GR+ +L IK N + A+R A+N+ QG+AADIIK+AMI
Sbjct: 797 ESTRNTASEKGYVETLFGRRLYLPDIKSRNGLRRKAAERAAINAPMQGTAADIIKLAMIA 856
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
+ + + Q + RLL+QVHDELV EV S ++ + V+ ME A
Sbjct: 857 VDNWVQ--------------QQPQDEVRLLMQVHDELVFEVKESALESVTAEVKALMEQA 902
Query: 2157 ALLLVPLLVKIQVGSTW 2173
A L VPL+ G W
Sbjct: 903 ATLDVPLIADAGFGDNW 919
>gi|424722540|ref|ZP_18151590.1| DNA-directed DNA polymerase, partial [Enterococcus faecalis ERV73]
gi|402401870|gb|EJV34611.1| DNA-directed DNA polymerase, partial [Enterococcus faecalis ERV73]
Length = 873
Score = 229 bits (584), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 444 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 503
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 504 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 560
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 561 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 615
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 616 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 658
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V R Q K + +GI+YG+
Sbjct: 659 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTPNMRRQAKAVNFGIVYGISDY 716
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 717 GLSQNLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 776
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 777 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMARRLKEEKLQATM 821
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 822 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 869
>gi|383192259|ref|YP_005202387.1| DNA polymerase I [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371590517|gb|AEX54247.1| DNA polymerase I [Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 930
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 258/529 (48%), Gaps = 49/529 (9%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAH 1705
D + S++L D S +++ + L + + +G+ KNQ+ A
Sbjct: 440 AFDTMLESYVL---DSVSGRHDMDSLADRYLGHKTVSFEEIAGKGKNQLTFNQIGLEQAA 496
Query: 1706 NGCCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQA 1764
T L LW ++ SE L +IE+PLV VL+ +E G+ +D
Sbjct: 497 PYAAEDADVTLQLHQALWPRIAQSESLKTVFTDIEMPLVPVLSHIERTGVLIDQNILAAH 556
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHC 1824
L +L LE KA+ LA F+L + + +LY KLPI + G PST++
Sbjct: 557 SKELAIRLNELENKAHELAEEPFNLSSTKQLQAILYEKQKLPILKKTPGGA--PSTNEEV 614
Query: 1825 LDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRL 1884
L L ++P+ VI E+R LAKL + + + ++ Q +H + Q TATGRL
Sbjct: 615 LAELALDYPLPKVILEYRGLAKLKSTYTDKLP----LMINPQSGRVHTSYHQAVTATGRL 670
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + D + + F P +++++LAADYSQIEL
Sbjct: 671 SSSDPNLQNIP----------------VRNDEGRRIRQAFIAP--KDYLILAADYSQIEL 712
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH SKD L+ ++ D+ A+ G DSV ++R K + +G++YGM
Sbjct: 713 RIMAHLSKDEGLLKAFAEGK-DIHRATASEVFGTPLDSVTGEQRRSAKAINFGLIYGMSA 771
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QLN E++ + + +PGV ++ + ++GYVE+L GR+ +L IK
Sbjct: 772 FGLSRQLNIPRKESQRYMDLYFERYPGVLEYMERTRAQASEQGYVETLDGRRLYLPDIKS 831
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK AMI++ + +PD+ R R
Sbjct: 832 SNAMRRKGAERAAINAPMQGTAADIIKRAMISVADWL----KQPDAP----------RVR 877
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV ++ A ++ ME++ L VPL V + G W
Sbjct: 878 IIMQVHDELVFEVHKDDVEAASEKIRTLMEASMKLAVPLKVDVGTGENW 926
>gi|430358757|ref|ZP_19425517.1| DNA polymerase A [Enterococcus faecalis OG1X]
gi|430366999|ref|ZP_19427712.1| DNA polymerase A [Enterococcus faecalis M7]
gi|429513582|gb|ELA03161.1| DNA polymerase A [Enterococcus faecalis OG1X]
gi|429516813|gb|ELA06289.1| DNA polymerase A [Enterococcus faecalis M7]
Length = 848
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 419 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 478
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 479 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 535
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 536 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 590
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 591 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 633
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V R Q K + +GI+YG+
Sbjct: 634 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTPNMRRQAKAVNFGIVYGISDY 691
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 692 GLSQNLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 751
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 752 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMARRLKEEKLQATM 796
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 797 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 844
>gi|53728836|ref|ZP_00134878.2| COG0749: DNA polymerase I - 3'-5' exonuclease and polymerase domains
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126207957|ref|YP_001053182.1| DNA polymerase I [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|126096749|gb|ABN73577.1| DNA polymerase I (POL I) [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 957
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 259/489 (52%), Gaps = 49/489 (10%)
Query: 1693 SGRWKNQMR--RAAHNGCCRRVAQTRALCSVLWKLLVSE-----ELIEALLNIEIPLVNV 1745
+G+ KNQ+ + A + + A+ + L ++LV E L++ IE+PLV V
Sbjct: 506 AGKGKNQLTFDKIAIDVASKYAAEDADVTMKLHQVLVPELDKTPTLVKLFNEIEMPLVEV 565
Query: 1746 LADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKL 1805
L+ +E G+ +D E L ++++L LE+ ++ AG F+L + + +L+ L L
Sbjct: 566 LSRIERNGVLIDPEKLLAQSAEIEQRLAELEQLVHSEAGEVFNLASTKQLQEILFTKLGL 625
Query: 1806 PIPEGHNKGKQHPSTDKHCLDLLRHEHPIVP-VIKEHRTLAKLLNCTLGSICSLARISMS 1864
P+ + KG PST++ LD L + +VP ++ EHR L+KL + + + I+
Sbjct: 626 PVLKKTPKGA--PSTNEEVLDELAGQGHLVPKLLMEHRGLSKLKSTYTDKLPLM--INQK 681
Query: 1865 TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDF 1924
T + +H + Q TATGRLS +PNLQ + + NE+ G R
Sbjct: 682 TGR--VHTSYHQAVTATGRLSSSDPNLQNI------PIRNEE---GR--------RIRQA 722
Query: 1925 FIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVG 1984
FI +++ + ++AADYSQIELR+MAH + D +I ++ D+ AA G + D V
Sbjct: 723 FI-ARDGYKIVAADYSQIELRIMAHLANDEGMITAFAEGK-DIHCATAAEIFGLALDQVT 780
Query: 1985 SQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCH 2044
S++R K + +G++YGM LS QL S +AK+ ++ + +P V ++ S
Sbjct: 781 SEQRRSAKAINFGLIYGMSEFGLSNQLGISRADAKKYMERYFQRYPAVQQFMTDIRESAS 840
Query: 2045 QKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGG 2104
+KGYVE+L GR+ +L +IK N + A+R A+N+ QG+AADIIK+AMI+I I G
Sbjct: 841 EKGYVETLFGRRLYLPEIKSSNAMRRKAAERVAINAPMQGTAADIIKVAMIDIDKAIRG- 899
Query: 2105 VYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLL 2164
++++QVHDELV EV +I+ L++ ME A L VPL+
Sbjct: 900 ---------------DDNIKMIMQVHDELVFEVKEELIEHYSQLIKAEMEKAIQLKVPLI 944
Query: 2165 VKIQVGSTW 2173
++ VG W
Sbjct: 945 AEVGVGDNW 953
>gi|398334865|ref|ZP_10519570.1| DNA polymerase I [Leptospira kmetyi serovar Malaysia str. Bejo-Iso9]
Length = 924
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/557 (29%), Positives = 282/557 (50%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G +L+ + D + S+++ P+ R + +L K++ L+
Sbjct: 415 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVIRPEGRRHNMDDLAKDL---LN 464
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ + +G+ K ++ A+ + L+++L + + +E +L +
Sbjct: 465 YDTITYDDLVGTGKKKKELTDIDPEQVAEYAAEDADVTFRLYQILRKSIKDSGVENILKD 524
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL+ VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 525 MEMPLIPVLAKMEKTGIALDVPYFEELARDFDREIRHLEGEIHKQAGGPFNIASTKELQK 584
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ L+L + + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 585 ILFEDLQLRVVKKTQTGY---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 641
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 642 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 680
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R FI ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 681 GRLLRKGFIVGSSDYEILSLDYSQIELRIMAHVSKDPAMLDAYN--HGIDIHKRTAAALY 738
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L S +EAK I+ + + +PGV +++
Sbjct: 739 GVPEKEVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRISRDEAKSFIERYMTQYPGVKTYM 798
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 799 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 858
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I Y + ++LLQVHDELV EV +E + ++K ME+A
Sbjct: 859 IHEDIEKKGY---------------QSKMLLQVHDELVFEVHKKEKEEFKASMKKFMETA 903
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P+LV+ + G W
Sbjct: 904 MPLDLPILVEGKFGVNW 920
>gi|365959716|ref|YP_004941283.1| DNA polymerase I [Flavobacterium columnare ATCC 49512]
gi|365736397|gb|AEW85490.1| DNA polymerase I [Flavobacterium columnare ATCC 49512]
Length = 944
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 226/436 (51%), Gaps = 37/436 (8%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IEIPLV VLADME GI +D E +QK++ +E + Y AG KF+L + + +
Sbjct: 542 IEIPLVQVLADMEREGINLDQEFLKSMSTDMQKEIETIENQIYEQAGEKFNLASPKQLGD 601
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ L++ + +T + L L ++H IV I E R L KL + + ++
Sbjct: 602 ILFEKLQIGGTKQKKTKTGQYATGEEVLSYLANDHKIVQDILEWRQLVKLKSTYVDALPQ 661
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+I+ T + +H ++QT ATGRLS PNLQ + E
Sbjct: 662 --QINNKTAR--VHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQ-------------- 703
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R FI EN LL+ADYSQIELR++A S + +I + D+ AA+
Sbjct: 704 ---IRKAFIARDENHTLLSADYSQIELRIIAALSGEDTMISAFQN-NEDIHKSTAAKVFN 759
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
D V ++R K + +GI+YG+ LS Q + S E+ E I ++ ++P + S++
Sbjct: 760 VPLDEVTKEQRSNAKTVNFGIIYGVSAFGLSNQTSLSRKESAELIDAYYKTYPKLKSYIT 819
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
+ + GYVE++ GR+R+L I N + A+R AVN+ QGSAADIIKIAMINI
Sbjct: 820 SQIDFARENGYVETISGRRRYLKDINSANAVVRGAAERNAVNAPIQGSAADIIKIAMINI 879
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA 2157
H + N+Q ++LLQVHDELV +V S +++ +++K ME+A
Sbjct: 880 HERLK----------EENYQ-----SKMLLQVHDELVFDVHNSELEKIKPMIKKEMENAF 924
Query: 2158 LLLVPLLVKIQVGSTW 2173
L VPL V+I +G W
Sbjct: 925 RLAVPLEVEIGLGKDW 940
>gi|325917393|ref|ZP_08179607.1| DNA polymerase I [Xanthomonas vesicatoria ATCC 35937]
gi|325536394|gb|EGD08176.1| DNA polymerase I [Xanthomonas vesicatoria ATCC 35937]
Length = 926
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 232/460 (50%), Gaps = 41/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VL L +E +E + +IE+PLV VLA +E G+ VD + L K++
Sbjct: 503 TLRLHQVLGPKLSAEPGLERVYRDIEMPLVEVLARIEANGVCVDAAELRRQSADLSKRML 562
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H
Sbjct: 563 AAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHE 620
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI E+R L KL + + + + Q +H + Q ATGRLS +PNLQ
Sbjct: 621 LPRVILEYRGLTKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQN 676
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E D +I R F P L+A DYSQIELR+MAH S D
Sbjct: 677 IPIRTE---------------DGRRIR-RAFVAPPGRK--LIACDYSQIELRIMAHLSGD 718
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+ DV AA GR+ D+V ER K + +G++YGM L+ QL
Sbjct: 719 PGLVSAFES-GADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGI 777
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A
Sbjct: 778 GRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGA 837
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AM+++ D +A + Q R ++LQVHDEL
Sbjct: 838 ERAAINAPMQGTAADIIKRAMVSV-----------DGWIAEHAQ----RALMILQVHDEL 882
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E D + +S V M +AA L VPL+V VG W
Sbjct: 883 VFEADIDFVDTLLSEVTARMATAAQLRVPLVVDSGVGDNW 922
>gi|257083792|ref|ZP_05578153.1| DNA polymerase A [Enterococcus faecalis Fly1]
gi|300859704|ref|ZP_07105792.1| DNA-directed DNA polymerase [Enterococcus faecalis TUSoD Ef11]
gi|256991822|gb|EEU79124.1| DNA polymerase A [Enterococcus faecalis Fly1]
gi|300850522|gb|EFK78271.1| DNA-directed DNA polymerase [Enterococcus faecalis TUSoD Ef11]
Length = 848
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 419 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 478
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 479 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 535
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 536 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 590
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 591 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 633
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V R Q K + +GI+YG+
Sbjct: 634 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTPNMRRQAKAVNFGIVYGISDY 691
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 692 GLSQNLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 751
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 752 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMARRLKEEKLQATM 796
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 797 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 844
>gi|428305528|ref|YP_007142353.1| DNA polymerase I [Crinalium epipsammum PCC 9333]
gi|428247063|gb|AFZ12843.1| DNA polymerase I [Crinalium epipsammum PCC 9333]
Length = 993
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 249/486 (51%), Gaps = 63/486 (12%)
Query: 1708 CCRRVAQTRALCSVL-WKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
C V T L S L +L L + L+ +E PL VLA+ME GI ++ +
Sbjct: 547 CGMDVYTTFGLVSKLRTELEAVPTLHKLLIEVEQPLEEVLAEMEYTGIRINAPYLNELSE 606
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
L+K+L +E++AY +AG +F+ + ++ +L+ L+L + K + STD L+
Sbjct: 607 QLEKELTKIEQQAYEIAGEEFNFGSPKQLSVLLFEKLQLDFKKSR-KNQSGYSTDAATLE 665
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L+ +HP+V +I ++RTLAKL + + ++ +L M ++ +H + QT T TGRLS
Sbjct: 666 KLQGDHPVVDLILQYRTLAKLKSTYVDALPAL----MVSKTQRVHTDFNQTGTTTGRLSS 721
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
PNLQ + F R F+P + W+L++ADYSQIELR+
Sbjct: 722 SNPNLQNIPIRTAFSR-----------------QIRKGFVP-EPGWLLVSADYSQIELRI 763
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
+AH SK+P L+ K + D+ T+ A + D++ S+ER K + +G++YGMG
Sbjct: 764 LAHLSKEPVLVTAY-KQNEDIHTVTARLLFEK--DTITSEERRLGKIINFGVIYGMGAQR 820
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF-------L 2059
+ + ++E KE I+ F +P V +L + GYVE++ R+R+ L
Sbjct: 821 FAREAGVKASEGKEFIEKFNQRYPAVFDYLESMKRNAIAHGYVETILHRRRYFNFEAGSL 880
Query: 2060 SKIKFGN------NKEKSKAQ------RQAVNSICQGSAADIIKIAMINIHSIIVGGVYK 2107
K K N N+ KS Q R A N+ QGS+ADIIKIAM +H ++
Sbjct: 881 RKKKGSNPNDINLNEIKSLGQADAQLLRAAANAPIQGSSADIIKIAMAKLHKVL------ 934
Query: 2108 PDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKI 2167
N+Q RLLLQVHDELV EV P ++E ++ ME+A L VPL+V I
Sbjct: 935 ------QNYQ-----ARLLLQVHDELVFEVPPKEVEELQQKIRSTMENAVQLEVPLVVDI 983
Query: 2168 QVGSTW 2173
+ G W
Sbjct: 984 RSGQNW 989
>gi|418697850|ref|ZP_13258836.1| DNA-directed DNA polymerase [Leptospira kirschneri str. H1]
gi|409954459|gb|EKO13414.1| DNA-directed DNA polymerase [Leptospira kirschneri str. H1]
Length = 917
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 277/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEV--KKR 1681
G N+ + LEN G LL+ + D + S++L P+ R + +L KE
Sbjct: 408 GQNIKYDLIVLENHG---FLLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEFLNYNT 460
Query: 1682 LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
++ + A G+ K ++ A+ + L+++ + + +E +L
Sbjct: 461 ITYDDLVGA---GKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 518 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGGPFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ +LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 578 ILFDNLKLRIVKKTQTGF---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 635 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 673
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 674 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHKRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPEIDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 792 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 852 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 897 MSLDLPIVVEGKFGVNW 913
>gi|307128781|ref|YP_003880797.1| DNA polymerase I [Dickeya dadantii 3937]
gi|306526310|gb|ADM96240.1| DNA polymerase I [Dickeya dadantii 3937]
Length = 944
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 273/556 (49%), Gaps = 59/556 (10%)
Query: 1633 GLENVGSSFLLLSPVHLKDGIDM-------CIVSWILWPDDERSSNPNLEKEVKKRLSSE 1685
G+ +G + V + GID+ + S++L D + +++ ++ L +
Sbjct: 429 GIRKIGQNLKFDKGVMARYGIDLRGIAFDTMLESYVL---DSVAGRHDMDSLSERYLQHK 485
Query: 1686 AAAAANRSGRWKNQMR------RAAHNGCCRRVAQTRALCSVLW-KLLVSEELIEALLNI 1738
+G+ KNQ+ A T L LW KL +EL + NI
Sbjct: 486 TITFEEIAGKGKNQLTFDQIPLAQASVYAAEDADVTLRLHETLWAKLEPQQELRKVFQNI 545
Query: 1739 EIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANV 1798
++PLV VL+ +E G+ +D + L ++L LE +A+ LAG F+L + + +
Sbjct: 546 DMPLVPVLSRIERTGVLIDTTILAEHSRELTQRLAELEVQAHELAGEAFNLSSPKQLGAI 605
Query: 1799 LYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSL 1858
LY L+LP+ + KG PST++ L L ++P+ +I EHR LAKL + + +
Sbjct: 606 LYEKLQLPVIKKTPKGA--PSTNEEVLAELALDYPLPKLILEHRGLAKLKSTYTDKLPQM 663
Query: 1859 ARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCK 1918
I+ T++ +H + Q TATGRLS +PNLQ + + NE+ G
Sbjct: 664 --INPLTRR--VHTSYHQAVTATGRLSSSDPNLQNI------PVRNEE---GR------- 703
Query: 1919 INARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWTG 1977
R FI + E + +LAADYSQIELR+MAH S+D L+ S HG D+ AA G
Sbjct: 704 -RIRQAFI-APEGYRILAADYSQIELRIMAHLSRDAGLLRAFS--HGLDIHRATAAEVFG 759
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
D V +++R K + +G++YGM LS QL +EA++ + + +PGV ++
Sbjct: 760 LPLDRVTTEQRRSAKAINFGLIYGMSAFGLSRQLAIPRSEAQKYMNLYFERYPGVQEYME 819
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
+GYV +L GR+ +L I N + A+R A+N+ QG+AADIIK AMI I
Sbjct: 820 RTRQQAVDQGYVSTLDGRRLYLPDIHSRNVNSRKAAERAAINAPMQGTAADIIKKAMIAI 879
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA 2157
A + K +L+QVHDELV EV SV+ EA + ++ ME
Sbjct: 880 D---------------AWLRQEKPLVTMLMQVHDELVFEVHHSVLDEASAKIRNLMEGCM 924
Query: 2158 LLLVPLLVKIQVGSTW 2173
L VPL V I GS W
Sbjct: 925 QLDVPLQVDIGTGSNW 940
>gi|126663071|ref|ZP_01734069.1| DNA polymerase I [Flavobacteria bacterium BAL38]
gi|126624729|gb|EAZ95419.1| DNA polymerase I [Flavobacteria bacterium BAL38]
Length = 950
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 227/436 (52%), Gaps = 37/436 (8%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
IEIPLV VLADME GI +D+E +QK++ E++ Y AG KF+L + + +
Sbjct: 548 IEIPLVPVLADMEKEGIRLDVEFLKNMSVDMQKEIDAFEQQIYETAGEKFNLASPKQLGD 607
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LK+ + +T + L L +EH IV I E R + KL + + ++ +
Sbjct: 608 ILFDKLKIGGAKQKKTKTGQYATGEEVLSYLANEHQIVRDILEWRQMVKLQSTYIDALPN 667
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
++ T + +H ++QT ATGRLS PNLQ + E G
Sbjct: 668 --QVDKKTGR--VHTDYMQTVAATGRLSSTNPNLQNIPIRTE---------KGRL----- 709
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R FI EN+ LL+ADYSQIELR++A + +I H D+ AA+
Sbjct: 710 ---IRKAFIARDENYTLLSADYSQIELRIIAALCGEENMIKAFQN-HEDIHKSTAAKVFN 765
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
D V ++R K + +GI+YG+ LS Q N S E+ E I+++ ++P + S++
Sbjct: 766 IPLDEVTKEQRSHAKTVNFGIIYGVSAFGLSNQTNLSRKESAELIEAYYQTYPKLKSFMT 825
Query: 2038 VAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINI 2097
V + GYVE++ GR+R+L I N + A+R AVN+ QGSAADIIKIAMINI
Sbjct: 826 SQVDFARENGYVETISGRRRYLKDINSANAIVRGGAERNAVNAPIQGSAADIIKIAMINI 885
Query: 2098 HSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAA 2157
H + +K ++LLQVHDELV +V S +++ +++ ME+A
Sbjct: 886 HKKLTSENWK---------------SKMLLQVHDELVFDVHNSELEKIQPMIKHEMENAF 930
Query: 2158 LLLVPLLVKIQVGSTW 2173
+ VPL V+I +G W
Sbjct: 931 KMAVPLDVEIGLGKNW 946
>gi|424676417|ref|ZP_18113290.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV103]
gi|424679374|ref|ZP_18116199.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV116]
gi|424682425|ref|ZP_18119196.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV129]
gi|424686084|ref|ZP_18122755.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV25]
gi|424689280|ref|ZP_18125866.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV31]
gi|424692794|ref|ZP_18129270.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV37]
gi|424697104|ref|ZP_18133440.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV41]
gi|424699383|ref|ZP_18135603.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV62]
gi|424703823|ref|ZP_18139947.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV63]
gi|424705988|ref|ZP_18142002.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV65]
gi|424716175|ref|ZP_18145489.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV68]
gi|424719116|ref|ZP_18148338.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV72]
gi|424726298|ref|ZP_18154966.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV81]
gi|424734501|ref|ZP_18163013.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV85]
gi|424746550|ref|ZP_18174781.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV93]
gi|424757301|ref|ZP_18185055.1| DNA-directed DNA polymerase [Enterococcus faecalis R508]
gi|402356957|gb|EJU91675.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV103]
gi|402357070|gb|EJU91785.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV116]
gi|402367721|gb|EJV02059.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV129]
gi|402368028|gb|EJV02355.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV25]
gi|402369017|gb|EJV03315.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV31]
gi|402376341|gb|EJV10286.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV62]
gi|402376657|gb|EJV10591.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV41]
gi|402376864|gb|EJV10782.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV37]
gi|402383748|gb|EJV17331.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV63]
gi|402388520|gb|EJV21955.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV68]
gi|402388804|gb|EJV22230.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV65]
gi|402397070|gb|EJV30106.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV72]
gi|402399865|gb|EJV32720.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV81]
gi|402407374|gb|EJV39906.1| DNA-directed DNA polymerase [Enterococcus faecalis R508]
gi|402407907|gb|EJV40405.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV85]
gi|402409277|gb|EJV41709.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV93]
Length = 882
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 453 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 512
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 513 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 569
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 570 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 624
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 625 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 667
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V R Q K + +GI+YG+
Sbjct: 668 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTPNMRRQAKAVNFGIVYGISDY 725
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 726 GLSQNLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 785
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 786 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMARRLKEEKLQATM 830
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 831 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 878
>gi|325923784|ref|ZP_08185399.1| DNA polymerase I [Xanthomonas gardneri ATCC 19865]
gi|325545717|gb|EGD16956.1| DNA polymerase I [Xanthomonas gardneri ATCC 19865]
Length = 933
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 202/699 (28%), Positives = 311/699 (44%), Gaps = 113/699 (16%)
Query: 1491 AINASGGFDCFL-----DRW----EATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENS 1541
A++A G +D L D W A +F FD D + ++ GL+V E
Sbjct: 328 ALSAPGQYDTILTQEQLDSWIARLRAAGQFAFDTETDSLDPLQADLI----GLSVAAEPG 383
Query: 1542 PVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKF 1601
Y L +G N QLE +Q ++ ++ VRK
Sbjct: 384 QAAY-----------------LPFG---HNFPGAPAQLER-RQALAQLAPLLTDPAVRKL 422
Query: 1602 TWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWI 1661
+ K + V+ R G+ L G S D + S++
Sbjct: 423 GQHGKYDLHVM--------RRHGIALAGYS---------------------DDTLLQSFV 453
Query: 1662 LWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRA--AHNGCCRRVAQ----T 1715
L + S+ +++ K+ L + + G+ Q+ A + + R A+ T
Sbjct: 454 L---NSGSARHDMDSLAKRYLGYDTVKYEDVCGKGAKQIPFAQISLDDATRYAAEDADIT 510
Query: 1716 RALCSVLWKLLVSEELIEALLN-IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRY 1774
L VL L +E +E + IE+PLV VLA +E G+ VD + L K++
Sbjct: 511 LRLHHVLGPKLAAEPGLERVYREIEMPLVEVLARIEANGVCVDAAELRRQSADLSKRMLA 570
Query: 1775 LEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPI 1834
++KA LAG F+L + + +L+ LKLP KG+ PST++ L+ + +H +
Sbjct: 571 AQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKTPKGQ--PSTNEEALEAIADQHEL 628
Query: 1835 VPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCV 1894
VI E+R L KL + + + + Q +H + Q ATGRLS +PNLQ +
Sbjct: 629 PRVILEYRGLTKLRSTYTDKLPEM----IHPQSGRVHTSYHQAGAATGRLSSSDPNLQNI 684
Query: 1895 EHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDP 1954
E D +I R F P+ L+A DYSQIELR+MAH S DP
Sbjct: 685 PIRTE---------------DGRRIR-RAFVAPAGRK--LIACDYSQIELRIMAHLSGDP 726
Query: 1955 ALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCS 2014
L+G DV AA GR+ D+V ER K + +G++YGM L+ QL
Sbjct: 727 GLVGAFES-GADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGIG 785
Query: 2015 SNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQ 2074
EA++ I + S +PGV ++ KGYVE++ GR+ +L I G+ +++ A+
Sbjct: 786 RGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGAE 845
Query: 2075 RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
R A+N+ QG+AADIIK AM+++ D+ +A + + ++LQVHDELV
Sbjct: 846 RAAINAPMQGTAADIIKRAMVSV-----------DAWIADHAE----HALMILQVHDELV 890
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E D + + V M +AA L VPL+V VG W
Sbjct: 891 FEADADFVDTLLGEVTARMSAAAELRVPLVVDSGVGDNW 929
>gi|256761634|ref|ZP_05502214.1| DNA polymerase A [Enterococcus faecalis T3]
gi|256964301|ref|ZP_05568472.1| DNA polymerase A [Enterococcus faecalis HIP11704]
gi|257086217|ref|ZP_05580578.1| DNA polymerase A [Enterococcus faecalis D6]
gi|257415442|ref|ZP_05592436.1| DNA polymerase A [Enterococcus faecalis ARO1/DG]
gi|307271878|ref|ZP_07553146.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0855]
gi|384512570|ref|YP_005707663.1| DNA-directed DNA polymerase I [Enterococcus faecalis OG1RF]
gi|384517926|ref|YP_005705231.1| DNA polymerase I [Enterococcus faecalis 62]
gi|422722808|ref|ZP_16779357.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2137]
gi|424671006|ref|ZP_18108021.1| DNA-directed DNA polymerase [Enterococcus faecalis 599]
gi|256682885|gb|EEU22580.1| DNA polymerase A [Enterococcus faecalis T3]
gi|256954797|gb|EEU71429.1| DNA polymerase A [Enterococcus faecalis HIP11704]
gi|256994247|gb|EEU81549.1| DNA polymerase A [Enterococcus faecalis D6]
gi|257157270|gb|EEU87230.1| DNA polymerase A [Enterococcus faecalis ARO1/DG]
gi|306511384|gb|EFM80386.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0855]
gi|315027064|gb|EFT38996.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2137]
gi|323480059|gb|ADX79498.1| DNA polymerase I [Enterococcus faecalis 62]
gi|327534459|gb|AEA93293.1| DNA-directed DNA polymerase I [Enterococcus faecalis OG1RF]
gi|402359566|gb|EJU94191.1| DNA-directed DNA polymerase [Enterococcus faecalis 599]
Length = 882
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 453 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 512
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 513 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 569
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 570 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 624
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 625 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 667
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V R Q K + +GI+YG+
Sbjct: 668 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTPNMRRQAKAVNFGIVYGISDY 725
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 726 GLSQNLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 785
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 786 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMARRLKEEKLQATM 830
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 831 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 878
>gi|257081123|ref|ZP_05575484.1| DNA polymerase A [Enterococcus faecalis E1Sol]
gi|256989153|gb|EEU76455.1| DNA polymerase A [Enterococcus faecalis E1Sol]
Length = 882
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 453 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 512
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 513 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 569
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 570 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 624
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 625 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 667
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V R Q K + +GI+YG+
Sbjct: 668 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTPNMRRQAKAVNFGIVYGISDY 725
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 726 GLSQNLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 785
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 786 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMARRLKEEKLQATM 830
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 831 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 878
>gi|384260298|ref|YP_005404232.1| DNA polymerase I [Rahnella aquatilis HX2]
gi|380756274|gb|AFE60665.1| DNA polymerase I [Rahnella aquatilis HX2]
Length = 934
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 260/529 (49%), Gaps = 49/529 (9%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQM--RRAAHNGCC 1709
D + S++L D S +++ + L + + +G+ KNQ+ + A
Sbjct: 444 AFDTMLESYVL---DSVSGRHDMDSLADRYLGHKTVSFEEIAGKGKNQLTFNQIALEQAA 500
Query: 1710 RRVAQ----TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQA 1764
A+ T L LW ++ SE L +IE+PLV VL+ +E G+ +D
Sbjct: 501 PYAAEDADVTLQLHQALWPRIAESESLKTVFTDIEMPLVPVLSHIERTGVLIDQNILAAH 560
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHC 1824
L +L LE KA+ LA F+L + + +LY KLPI + G PST++
Sbjct: 561 SKELAIRLNELENKAHELAEEPFNLSSTKQLQAILYEKQKLPILKKTPGGA--PSTNEEV 618
Query: 1825 LDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRL 1884
L L ++P+ VI E+R LAKL + + + ++ Q +H + Q TATGRL
Sbjct: 619 LAELALDYPLPKVILEYRGLAKLKSTYTDKLP----LMINPQSGRVHPSYHQAVTATGRL 674
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + D + + F P +++I+LAADYSQIEL
Sbjct: 675 SSSDPNLQNIP----------------VRNDEGRRIRQAFIAP--KDYIILAADYSQIEL 716
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH SKD L+ ++ D+ AA G + V ++R K + +G++YGM
Sbjct: 717 RIMAHLSKDEGLLKAFAEGK-DIHRATAAEVFGTPLEKVSGEQRRSAKAINFGLIYGMSA 775
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QLN E++ + + +PGV ++ + ++GYVE+L GR+ +L IK
Sbjct: 776 FGLSRQLNIPRKESQRYMDLYFERYPGVLEYMERTRTQASEQGYVETLDGRRLYLPDIKS 835
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK AMI++ + +PD+ R R
Sbjct: 836 SNAMRRKGAERAAINAPMQGTAADIIKRAMISVADWL----KQPDAP----------RAR 881
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV ++ A ++ ME++ L VPL V + G W
Sbjct: 882 IIMQVHDELVFEVHKDDVEVASEKIRNLMEASMTLAVPLKVDVGTGENW 930
>gi|398340152|ref|ZP_10524855.1| DNA polymerase I [Leptospira kirschneri serovar Bim str. 1051]
Length = 917
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 277/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G LL+ + D + S++L P+ R + +L KE L+
Sbjct: 408 GQNIKYDLIVLENHG---FLLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEF---LN 457
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ +G+ K ++ A+ + L+++ + + +E +L
Sbjct: 458 YNTITYDDLVGTGKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 518 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHKQAGGPFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ +LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 578 ILFDNLKLRIVKKTQTGF---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 635 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 673
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 674 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHKRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPEIDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 792 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 852 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 897 MSLDLPIVVEGKFGVNW 913
>gi|259047059|ref|ZP_05737460.1| DNA polymerase I [Granulicatella adiacens ATCC 49175]
gi|259036109|gb|EEW37364.1| DNA polymerase I [Granulicatella adiacens ATCC 49175]
Length = 884
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 233/453 (51%), Gaps = 42/453 (9%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L K L E +E+PL ++LA ME+ GI VD E ++ +++L+ +E++ Y
Sbjct: 469 LLKRLEENEQTHLYWEMELPLSDILARMEIQGIRVDRERLVEMGVEFEERLKEIEQEIYE 528
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEH 1841
LAG +F++ + + +L+ + LP+ + K K ST L+ L H+ PIV +I E+
Sbjct: 529 LAGEEFNINSTKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEKLAHQAPIVELILEY 585
Query: 1842 RTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFK 1901
R LAKL + + + + + + +H ++Q T TGRLS +PNLQ + + K
Sbjct: 586 RQLAKLNSTYVEGLQAYIQ-----EDGKIHTRFIQNLTQTGRLSSVDPNLQNIP--IRTK 638
Query: 1902 MSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLS 1961
Y F+P ++W +L++DYSQIELR++AH + D +I
Sbjct: 639 EGRRIRYA---------------FLPEHDDWKILSSDYSQIELRVLAHIAGDKHMIEAF- 682
Query: 1962 KPHGDVFTMIAARWTGRSE-DSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKE 2020
K + D+ T A R G S D V S+ R Q K + +GI+YG+ LS+ LN S AKE
Sbjct: 683 KNNVDIHTNTAMRVFGISNPDDVTSEMRRQAKAVNFGIVYGISDYGLSQNLNISRKRAKE 742
Query: 2021 KIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNS 2080
I + F GV ++ V +K YVE+L R+R+L I N +S A+R A+NS
Sbjct: 743 FIDRYLEEFQGVKDFMESIVKEAREKDYVETLFHRRRYLPDIHSSNFNLRSFAERTAMNS 802
Query: 2081 ICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPS 2140
QGSAADI+K+AMI L + K + LLLQVHDEL+ EV
Sbjct: 803 PIQGSAADILKMAMI---------------ELDREMRERKFKANLLLQVHDELIFEVPQD 847
Query: 2141 VIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++ SLV+ ME+A L VPL VG W
Sbjct: 848 ELESLQSLVEGVMENAVSLKVPLRADSNVGDNW 880
>gi|408491392|ref|YP_006867761.1| DNA polymerase I PolA [Psychroflexus torquis ATCC 700755]
gi|408468667|gb|AFU69011.1| DNA polymerase I PolA [Psychroflexus torquis ATCC 700755]
Length = 942
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 186/650 (28%), Positives = 299/650 (46%), Gaps = 103/650 (15%)
Query: 1530 EIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRI 1589
E+ G+A WE+ +YV P+D E Q E+++ ++
Sbjct: 386 ELVGIAFSWESHKGFYVAFPED----------------------QNEAQ-ELVE----KL 418
Query: 1590 GEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHL 1649
E ++ K N+K I+VL + + ++ G F
Sbjct: 419 RPFFESTEIEKVGQNLKYDIKVLANYKLKVK-----------------GPLF-------- 453
Query: 1650 KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA-AANRSGRWKNQMRRAAHNGC 1708
D + +I+ PD N N+ E S + + G+ + MR +
Sbjct: 454 ----DTMLAHYIINPD--MRHNMNILAETYLNYSPQPIEDLIGKKGKRQKTMRTVSLEDQ 507
Query: 1709 CRRVAQTRALCSVLWKLLVSEELIEA-----LLNIEIPLVNVLADMELWGIGVDMEGCLQ 1763
+ + A + K +EL EA ++EIPL+ VLA ME+ GI +D
Sbjct: 508 TQYAVED-ADITFQLKTYFEKELKEASNEPLFKDMEIPLLRVLAAMEIEGINLDKSALEN 566
Query: 1764 ARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKH 1823
L + + LEK Y A +F++ + + +L+G L++ K Q+ ST +
Sbjct: 567 ISEKLDEDIERLEKSVYVEAEGEFNIGSPKQLGEILFGKLEIAKKPKKTKSGQY-STGEE 625
Query: 1824 CLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGR 1883
L +H IV + E R L+KL + + ++ +I T++ +H ++QT ATGR
Sbjct: 626 VLSNYAKDHKIVREVLEWRQLSKLKSTYVDALPK--QIHPRTKR--VHTEFMQTVAATGR 681
Query: 1884 LSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIE 1943
LS PNLQ + E EV R F+P EN++LLAADYSQIE
Sbjct: 682 LSSNNPNLQNIPIRTE----------RGREV-------RKAFVPRDENYVLLAADYSQIE 724
Query: 1944 LRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMG 2003
LR++A S++ ++ K D+ AAR G + V +R K + +GI+YG+
Sbjct: 725 LRIIAALSQEKTMMNAF-KNGEDIHASTAARVFGVDIEEVTRAQRSNAKTVNFGIIYGVS 783
Query: 2004 PNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIK 2063
LS Q + + NE+KE I+++ ++P + ++ V + GYV+++ GR+R+L I
Sbjct: 784 AFGLSNQTDLTRNESKELIETYYKTYPKLRDYMDEQVEFAKEHGYVKTVMGRRRYLKDIN 843
Query: 2064 FGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRC 2123
N+ +S A+R AVN+ QGSAADIIK+AMINI+ D+ NF +
Sbjct: 844 AKNHIVRSAAERNAVNAPIQGSAADIIKVAMINIY----------DALEEQNF-----KS 888
Query: 2124 RLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++LLQVHDEL+ + I +LV+ ME+A L VPL V++ G W
Sbjct: 889 KMLLQVHDELIFDAHKDEIDALTALVKDKMENAFKLDVPLDVEMGTGQNW 938
>gi|15837705|ref|NP_298393.1| DNA polymerase I [Xylella fastidiosa 9a5c]
gi|9106058|gb|AAF83913.1|AE003946_4 DNA polymerase I [Xylella fastidiosa 9a5c]
Length = 923
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 227/459 (49%), Gaps = 40/459 (8%)
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
R C + KLL L IE+PLV VL +E G+ +D E + L +++
Sbjct: 500 RLHCVLAPKLLAEPSLERVYREIEMPLVAVLERIEANGVQIDAEELYKQSADLSRRMVIA 559
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
++KA LAG F+L + + +L+ LKLP+ KG+ PST++ L+ + +H +
Sbjct: 560 QQKAMDLAGRHFNLDSPKQLQVLLFDELKLPVVVKTPKGQ--PSTNEEALEAIVDQHALP 617
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
VI E+R+LAKL N + + + +H ++ Q ATGRLS +PNLQ +
Sbjct: 618 RVILEYRSLAKLRNTYTEKLPEM----IHPHTGRVHTNYHQAGAATGRLSSSDPNLQNIP 673
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
D + R F PS L+A DYSQIELR+MAH S D
Sbjct: 674 ----------------IRTDDGRRIRRAFVAPSGRK--LIACDYSQIELRIMAHLSGDAG 715
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ DV IAA GR D V ER K + +G++YGM L+ QL S
Sbjct: 716 LVDAFESGV-DVHCAIAAEVFGRGIDEVTLNERRAAKAINFGLIYGMSAFGLARQLGISR 774
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
EA++ I + F GV ++ +GYVE++ GR+ +L+ I GN +++ A+R
Sbjct: 775 GEAQDYIALYFDRFAGVRDFMENTRQQARDRGYVETVFGRRLYLNSIASGNQTQRAGAER 834
Query: 2076 QAVNSICQGSAADIIKIAMINIHSII-VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
A+N+ QG+AADIIK AM+ + + VGG + R ++LQVHDELV
Sbjct: 835 AAINAPMQGTAADIIKRAMVAVDGWLGVGG--------------HRERALMILQVHDELV 880
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E D + V V M +AA L VPL+V + VG W
Sbjct: 881 FEADEGFVPTLVHEVSARMAAAAQLRVPLVVDVGVGHHW 919
>gi|302875558|ref|YP_003844191.1| DNA polymerase I [Clostridium cellulovorans 743B]
gi|307690087|ref|ZP_07632533.1| DNA polymerase I [Clostridium cellulovorans 743B]
gi|302578415|gb|ADL52427.1| DNA polymerase I [Clostridium cellulovorans 743B]
Length = 862
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 229/439 (52%), Gaps = 41/439 (9%)
Query: 1735 LLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
L IE+PLV VLADME G VD E Q R ++ +K+ Y +AG +F++ +
Sbjct: 461 LYKIELPLVKVLADMEKVGFKVDREQLDQLREKFINEITVSQKEIYEMAGEEFNISSPKQ 520
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
+ +L+ L LP+ + K K ST+ L+ L+ +HPI+ I +R L KL + +
Sbjct: 521 LGKILFEKLDLPVIK---KTKTGYSTNAEVLEKLKDKHPIIDKITYYRQLTKLNSTYVEG 577
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
+ I + Q +H + QT T TGRLS EPNLQ + ++++M G A
Sbjct: 578 L-----IHVIDQDGRIHSSFNQTVTTTGRLSSTEPNLQNIP--IKYEM-------GRA-- 621
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
R F+P+ E ++L+ADYSQIELR++AH + D + + H D+ T A+
Sbjct: 622 ------IRKVFVPNDEESLILSADYSQIELRVLAHMADDENMKTAYLE-HIDIHTKTASE 674
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
D V ++R K + +GI+YG+ LSE L S EAK+ I ++ S +P V
Sbjct: 675 VFNLPLDQVTKEKRSAAKAVNFGIVYGISDFALSEDLKISKKEAKQYIDTYFSRYPKVKE 734
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ ++ ++ YV ++ R+RF+ +I N K+ R A+N+ QGSAADIIK+AM
Sbjct: 735 YISSTIAKAEKELYVNTIFNRRRFIPEITSSNKIVKALGDRLAMNAPIQGSAADIIKLAM 794
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
+N+ + + K + L+LQVHDE++L V ++ LV+K ME
Sbjct: 795 VNV---------------SKRLKEEKLKSSLILQVHDEIILNVYKDELETVKELVKKEME 839
Query: 2155 SAALLLVPLLVKIQVGSTW 2173
S VPL V I G+TW
Sbjct: 840 SVIDFSVPLEVDINTGTTW 858
>gi|29375463|ref|NP_814617.1| DNA polymerase I [Enterococcus faecalis V583]
gi|227554989|ref|ZP_03985036.1| DNA polymerase I [Enterococcus faecalis HH22]
gi|229548814|ref|ZP_04437539.1| DNA polymerase I [Enterococcus faecalis ATCC 29200]
gi|255971330|ref|ZP_05421916.1| DNA polymerase A [Enterococcus faecalis T1]
gi|255973949|ref|ZP_05424535.1| DNA polymerase A [Enterococcus faecalis T2]
gi|256617748|ref|ZP_05474594.1| DNA polymerase A [Enterococcus faecalis ATCC 4200]
gi|256957263|ref|ZP_05561434.1| DNA polymerase A [Enterococcus faecalis DS5]
gi|256960003|ref|ZP_05564174.1| DNA polymerase A [Enterococcus faecalis Merz96]
gi|257077763|ref|ZP_05572124.1| DNA polymerase A [Enterococcus faecalis JH1]
gi|257089289|ref|ZP_05583650.1| DNA polymerase I [Enterococcus faecalis CH188]
gi|257418473|ref|ZP_05595467.1| DNA polymerase A [Enterococcus faecalis T11]
gi|257421124|ref|ZP_05598114.1| DNA polymerase I [Enterococcus faecalis X98]
gi|293383756|ref|ZP_06629663.1| DNA polymerase I [Enterococcus faecalis R712]
gi|293388768|ref|ZP_06633261.1| DNA polymerase I [Enterococcus faecalis S613]
gi|294781289|ref|ZP_06746635.1| DNA-directed DNA polymerase [Enterococcus faecalis PC1.1]
gi|307267954|ref|ZP_07549342.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4248]
gi|307278426|ref|ZP_07559501.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0860]
gi|307286686|ref|ZP_07566772.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0109]
gi|312901580|ref|ZP_07760853.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0470]
gi|312904438|ref|ZP_07763597.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0635]
gi|312907028|ref|ZP_07766024.1| DNA-directed DNA polymerase [Enterococcus faecalis DAPTO 512]
gi|312952854|ref|ZP_07771716.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0102]
gi|312978714|ref|ZP_07790441.1| DNA-directed DNA polymerase [Enterococcus faecalis DAPTO 516]
gi|397699268|ref|YP_006537056.1| DNA polymerase I [Enterococcus faecalis D32]
gi|422689765|ref|ZP_16747869.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0630]
gi|422692165|ref|ZP_16750187.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0031]
gi|422694479|ref|ZP_16752470.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4244]
gi|422707336|ref|ZP_16765031.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0043]
gi|422711659|ref|ZP_16768586.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0027]
gi|422713360|ref|ZP_16770110.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0309A]
gi|422717614|ref|ZP_16774298.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0309B]
gi|422720357|ref|ZP_16776975.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0017]
gi|422727398|ref|ZP_16783839.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0312]
gi|422729866|ref|ZP_16786261.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0012]
gi|422731007|ref|ZP_16787388.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0645]
gi|422735316|ref|ZP_16791590.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1341]
gi|422738965|ref|ZP_16794150.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2141]
gi|422866951|ref|ZP_16913555.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1467]
gi|428766384|ref|YP_007152495.1| DNA polymerase I [Enterococcus faecalis str. Symbioflor 1]
gi|29342923|gb|AAO80687.1| DNA polymerase I [Enterococcus faecalis V583]
gi|227175871|gb|EEI56843.1| DNA polymerase I [Enterococcus faecalis HH22]
gi|229306043|gb|EEN72039.1| DNA polymerase I [Enterococcus faecalis ATCC 29200]
gi|255962348|gb|EET94824.1| DNA polymerase A [Enterococcus faecalis T1]
gi|255966821|gb|EET97443.1| DNA polymerase A [Enterococcus faecalis T2]
gi|256597275|gb|EEU16451.1| DNA polymerase A [Enterococcus faecalis ATCC 4200]
gi|256947759|gb|EEU64391.1| DNA polymerase A [Enterococcus faecalis DS5]
gi|256950499|gb|EEU67131.1| DNA polymerase A [Enterococcus faecalis Merz96]
gi|256985793|gb|EEU73095.1| DNA polymerase A [Enterococcus faecalis JH1]
gi|256998101|gb|EEU84621.1| DNA polymerase I [Enterococcus faecalis CH188]
gi|257160301|gb|EEU90261.1| DNA polymerase A [Enterococcus faecalis T11]
gi|257162948|gb|EEU92908.1| DNA polymerase I [Enterococcus faecalis X98]
gi|291078832|gb|EFE16196.1| DNA polymerase I [Enterococcus faecalis R712]
gi|291081925|gb|EFE18888.1| DNA polymerase I [Enterococcus faecalis S613]
gi|294451625|gb|EFG20081.1| DNA-directed DNA polymerase [Enterococcus faecalis PC1.1]
gi|295113921|emb|CBL32558.1| DNA polymerase I [Enterococcus sp. 7L76]
gi|306502164|gb|EFM71448.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0109]
gi|306504932|gb|EFM74127.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0860]
gi|306515595|gb|EFM84122.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4248]
gi|310627013|gb|EFQ10296.1| DNA-directed DNA polymerase [Enterococcus faecalis DAPTO 512]
gi|310629370|gb|EFQ12653.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0102]
gi|310632136|gb|EFQ15419.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0635]
gi|311288421|gb|EFQ66977.1| DNA-directed DNA polymerase [Enterococcus faecalis DAPTO 516]
gi|311291375|gb|EFQ69931.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0470]
gi|315032493|gb|EFT44425.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0017]
gi|315034273|gb|EFT46205.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0027]
gi|315145154|gb|EFT89170.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2141]
gi|315148036|gb|EFT92052.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4244]
gi|315149639|gb|EFT93655.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0012]
gi|315152951|gb|EFT96967.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0031]
gi|315155181|gb|EFT99197.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0043]
gi|315157509|gb|EFU01526.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0312]
gi|315163062|gb|EFU07079.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0645]
gi|315167987|gb|EFU12004.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1341]
gi|315574209|gb|EFU86400.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0309B]
gi|315577339|gb|EFU89530.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0630]
gi|315581648|gb|EFU93839.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0309A]
gi|329577869|gb|EGG59290.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1467]
gi|397335907|gb|AFO43579.1| DNA polymerase I [Enterococcus faecalis D32]
gi|427184557|emb|CCO71781.1| DNA polymerase I [Enterococcus faecalis str. Symbioflor 1]
Length = 882
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 453 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 512
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 513 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 569
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 570 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 624
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 625 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 667
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V R Q K + +GI+YG+
Sbjct: 668 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTPNMRRQAKAVNFGIVYGISDY 725
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 726 GLSQNLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 785
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 786 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMARRLKEEKLQATM 830
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 831 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 878
>gi|418677179|ref|ZP_13238455.1| DNA-directed DNA polymerase [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418685472|ref|ZP_13246648.1| DNA-directed DNA polymerase [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741387|ref|ZP_13297761.1| DNA-directed DNA polymerase [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|400322127|gb|EJO69985.1| DNA-directed DNA polymerase [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410740080|gb|EKQ84802.1| DNA-directed DNA polymerase [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750835|gb|EKR07814.1| DNA-directed DNA polymerase [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 917
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 277/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G LL+ + D + S++L P+ R + +L KE L+
Sbjct: 408 GQNIKYDLIVLENHG---FLLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEF---LN 457
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ +G+ K ++ A+ + L+++ + + +E +L
Sbjct: 458 YNTITYDDLVGTGKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 518 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHKQAGGPFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ +LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 578 ILFDNLKLRIVKKTQTGF---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 635 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 673
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 674 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHKRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPEIDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 792 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 852 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 897 MSLDLPIVVEGKFGVNW 913
>gi|339000058|ref|ZP_08638681.1| DNA polymerase I [Halomonas sp. TD01]
gi|338763114|gb|EGP18123.1| DNA polymerase I [Halomonas sp. TD01]
Length = 924
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 192/681 (28%), Positives = 319/681 (46%), Gaps = 100/681 (14%)
Query: 1498 FDCFLDRWEATHEFYFDIHYDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHR 1557
FD +L+R + F FD+ + ++ ++ G+ + E Y+ L D
Sbjct: 335 FDAWLERLKQAERFCFDLETTSLNYMDADIV----GVGLALEAGEAAYIPLAHDYLDAPA 390
Query: 1558 RKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAV 1617
+ DR +Q + + ++E + K N+K I VL A
Sbjct: 391 QLDR---------------------QQVLQALKPLLEDPEKTKIGQNLKYDISVL--ANY 427
Query: 1618 SIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKE 1677
I G L D + S++L R +L +
Sbjct: 428 DIHVVGPLA---------------------------DTMLASYVLNSTATRHDMDSLALK 460
Query: 1678 V--KKRLSSEAAAAANRSGRWKNQMR-RAAHNGCCRRVAQTRALCSVLWKLLVSE-ELIE 1733
+K +S E A NQ+ A C V T L L + E L +
Sbjct: 461 YLGEKTISFEEIAGKGAKQLTFNQIALEQAVPYACEDVDITLRLQETLRPQVEREGRLAD 520
Query: 1734 ALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAA 1793
L ++E+PL+NVL+ +E G+ +D E + L++++R LE +A+ LAG +F+L +
Sbjct: 521 VLDHLELPLINVLSRIERNGVALDAERLHEQSQQLERRIRELESEAFELAGREFNLGSPK 580
Query: 1794 DIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLG 1853
+ +L+ K+P+ + KG PST + L+ L ++P+ VI +HR LAKL +
Sbjct: 581 QLGQILFEEQKIPVIKKTPKGA--PSTAEAVLEELALDYPLPKVIMQHRGLAKLKSTYTD 638
Query: 1854 SICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAE 1913
+ L ++ +T + +H + Q TATGRLS +PNLQ + E
Sbjct: 639 KLPRL--LNKTTGR--VHTSYHQAVTATGRLSSSDPNLQNIPIRTE-------------- 680
Query: 1914 VDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAA 1973
+ KI R F+ ++ + ++AADYSQIELR+MAH S+D L+ ++ D+ T AA
Sbjct: 681 -EGRKI--RQAFV-ARPGYRIVAADYSQIELRIMAHLSEDKGLLNAFAEGR-DIHTATAA 735
Query: 1974 RWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVA 2033
G + + V + +R K + +G++YGM LS QL+ N+A+ I + +PGVA
Sbjct: 736 EVFGTALEKVSADQRRSAKAINFGLIYGMSAWGLSRQLHIDRNQAQTYIDRYFDRYPGVA 795
Query: 2034 SWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIA 2093
++ + + G+VE++ GR+ +L +I N + A+R A+N+ QG+AADIIK A
Sbjct: 796 RYMDRIRTQAAEDGFVETVLGRRLYLPEIHSQNRNRRQGAERTAINAPMQGTAADIIKQA 855
Query: 2094 MINIHSIIVGGVYKPDSSLA-ANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKC 2152
MI++ D+ LA F L +++QVHDELV EV ++ + V+
Sbjct: 856 MIDV-----------DAWLAEEEFDAL-----MVMQVHDELVFEVAEVQVEAFIEQVRAR 899
Query: 2153 MESAALLLVPLLVKIQVGSTW 2173
M++AA L VPL+V+ + G+ W
Sbjct: 900 MQAAATLSVPLIVEAESGANW 920
>gi|421131849|ref|ZP_15592026.1| DNA-directed DNA polymerase [Leptospira kirschneri str. 2008720114]
gi|410356785|gb|EKP04091.1| DNA-directed DNA polymerase [Leptospira kirschneri str. 2008720114]
Length = 917
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 277/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G LL+ + D + S++L P+ R + +L KE L+
Sbjct: 408 GQNIKYDLIVLENHG---FLLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEF---LN 457
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ +G+ K ++ A+ + L+++ + + +E +L
Sbjct: 458 YNTITYDDLVGTGKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 518 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHKQAGGPFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ +LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 578 ILFDNLKLRIVKKTQTGF---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 635 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 673
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 674 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHKRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPEIDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 792 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 852 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 897 MSLDLPIVVEGKFGVNW 913
>gi|229546723|ref|ZP_04435448.1| DNA polymerase I [Enterococcus faecalis TX1322]
gi|229308072|gb|EEN74059.1| DNA polymerase I [Enterococcus faecalis TX1322]
Length = 837
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 408 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 467
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 468 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 524
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 525 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 579
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 580 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 622
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V R Q K + +GI+YG+
Sbjct: 623 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTPNMRRQAKAVNFGIVYGISDY 680
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 681 GLSQYLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 740
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 741 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMARRLKEEKLQATM 785
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 786 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 833
>gi|315125371|ref|YP_004067374.1| DNA polymerase I [Pseudoalteromonas sp. SM9913]
gi|315013884|gb|ADT67222.1| multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal);
3'->5' polymerase; 3'->5' exonuclease (C-terminal)
[Pseudoalteromonas sp. SM9913]
Length = 911
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 243/461 (52%), Gaps = 42/461 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L VLW KL E+L +IE+PLV+V++D+E G+ +D L ++L
Sbjct: 487 TLRLHQVLWPKLEADEKLKSVFEDIEMPLVSVISDIERTGVAIDSNMLATHSQRLGERLL 546
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LEK+A+ +AG F+L + + +L+ L+LP+ + KG PST + L L H++P
Sbjct: 547 ELEKEAFEIAGEPFNLSSPKQLQVLLFEKLELPVIKKTPKGA--PSTAEEVLQELAHDYP 604
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ VI EHR L+KL + + + ++ TQ+ +H + Q TATGRLS +PNLQ
Sbjct: 605 LPKVIIEHRGLSKLKSTYTDKLPLI--VNERTQR--VHTSYHQAVTATGRLSSSDPNLQN 660
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E + +I R+ FI + + + ++AADYSQIELR+MAH S+D
Sbjct: 661 IPIRSE---------------EGRRI--REAFI-AADGYKIVAADYSQIELRIMAHLSQD 702
Query: 1954 PALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
L+ + +G DV + AA G + V S R + K + +G++YGM L+ QL+
Sbjct: 703 KGLLSAFA--NGLDVHSATAAEVFGVELEEVTSDMRRKAKAVNFGLIYGMSAFGLARQLD 760
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+EA+ I + FPGV ++ + GYVE++ GR+ L +I N +
Sbjct: 761 VPRHEAQHYIDKYFERFPGVLEYMETTREKAAENGYVETIFGRRLHLPEINARNGARRKG 820
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIK AM+++H+ + Q +LL+QVHDE
Sbjct: 821 AERAAINAPMQGTAADIIKKAMLSVHAWV--------------NQQAPNTVKLLMQVHDE 866
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LV E+ ++ + + M AA L VPL+V+ G W
Sbjct: 867 LVFEIKTECTEQYTKQICELMSQAAQLDVPLIVEADEGDNW 907
>gi|225016393|ref|ZP_03705585.1| hypothetical protein CLOSTMETH_00296, partial [Clostridium
methylpentosum DSM 5476]
gi|224950835|gb|EEG32044.1| hypothetical protein CLOSTMETH_00296 [Clostridium methylpentosum DSM
5476]
Length = 890
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 249/464 (53%), Gaps = 42/464 (9%)
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQ 1769
+ +A ALC L K L E+ L +IE+PL VLA+ME G VD+ G +LQ
Sbjct: 464 KEIAAFPALCDALSKELTEWEMGSLLHDIELPLSEVLANMENEGFQVDVAGVRTFGEMLQ 523
Query: 1770 KKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLR 1829
++ + ++ Y AG +F++ + ++ +L+ L LP + K K ST+ L+ L
Sbjct: 524 VEIERITQEIYGYAGEEFNINSTRELGAILFDKLGLPTGK---KTKTGYSTNVDVLEKLI 580
Query: 1830 HEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEP 1889
+HPI ++ E+R L KL + + L +++ Q+ +H + QT T TGR+S EP
Sbjct: 581 PKHPIAGLVLEYRKLTKLSSTY---VTGLLKVTGPDQR--VHSVFRQTETRTGRISSTEP 635
Query: 1890 NLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAH 1949
N+Q + E R FF+ ++ +LL ADYSQIELR++AH
Sbjct: 636 NMQNIPIRTELGS-----------------QMRKFFV-AKPGCVLLDADYSQIELRILAH 677
Query: 1950 FSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSE 2009
S D +I + D+ T A++ G + + ++ R + K + +GI+YG+G +LS+
Sbjct: 678 ISNDSRMITAF-REGADIHTATASQVFGVPAEVLPAELRRRAKAINFGIVYGIGAYSLSQ 736
Query: 2010 QLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKE 2069
+N S EAKE I+++ ++ GV +++ V S + GYV+++ GR R L +I N+
Sbjct: 737 DINVSVAEAKEYIENYLHTYSGVRQYMNDIVESSAKSGYVKTMFGRVRHLPEITSSNHNT 796
Query: 2070 KSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
K+ +R A+N+ QG+AADIIKIAM+ ++ + + L+A +L+LQV
Sbjct: 797 KAFGERVALNTPIQGTAADIIKIAMVKVYRRL------KEEGLSA---------QLILQV 841
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
HDEL++EV + A ++++ ME AA L VPL V + G W
Sbjct: 842 HDELLIEVSKADAPRAKVILKEEMEHAADLSVPLSVDVSEGENW 885
>gi|322835075|ref|YP_004215102.1| DNA polymerase I [Rahnella sp. Y9602]
gi|321170276|gb|ADW75975.1| DNA polymerase I [Rahnella sp. Y9602]
Length = 934
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 260/529 (49%), Gaps = 49/529 (9%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQM--RRAAHNGCC 1709
D + S++L D S +++ + L + + +G+ KNQ+ + A
Sbjct: 444 AFDTMLESYVL---DSVSGRHDMDSLADRYLGHKTVSFEEIAGKGKNQLTFNQIALEQAA 500
Query: 1710 RRVAQ----TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQA 1764
A+ T L LW ++ SE L +IE+PLV VL+ +E G+ +D
Sbjct: 501 PYAAEDADVTLQLHQALWPRIAESESLKTVFTDIEMPLVPVLSHIERTGVLIDQNILAAH 560
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHC 1824
L +L LE KA+ LA F+L + + +LY KLPI + G PST++
Sbjct: 561 SKELAIRLNELENKAHELAEEPFNLSSTKQLQAILYEKQKLPILKKTPGGA--PSTNEEV 618
Query: 1825 LDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRL 1884
L L ++P+ VI E+R LAKL + + + ++ Q +H + Q TATGRL
Sbjct: 619 LAELALDYPLPKVILEYRGLAKLKSTYTDKLP----LMINPQSGRVHTSYHQAVTATGRL 674
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + D + + F P +++I+LAADYSQIEL
Sbjct: 675 SSSDPNLQNIP----------------VRNDEGRRIRQAFIAP--KDYIILAADYSQIEL 716
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH SKD L+ ++ D+ AA G + V ++R K + +G++YGM
Sbjct: 717 RIMAHLSKDEGLLKAFAEGK-DIHRATAAEVFGTPLEKVSGEQRRSAKAINFGLIYGMSA 775
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS QLN E++ + + +PGV ++ + ++GYVE+L GR+ +L IK
Sbjct: 776 FGLSRQLNIPRKESQRYMDLYFERYPGVLEYMERTRTQASEQGYVETLDGRRLYLPDIKS 835
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R A+N+ QG+AADIIK AMI++ + +PD+ R R
Sbjct: 836 SNAMRRKGAERAAINAPMQGTAADIIKRAMISVADWL----KQPDAP----------RAR 881
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV ++ A ++ ME++ L VPL V + G W
Sbjct: 882 IIMQVHDELVFEVHKDDVEVASEKIRNLMEASMTLAVPLKVDVGTGENW 930
>gi|71276059|ref|ZP_00652340.1| DNA polymerase A [Xylella fastidiosa Dixon]
gi|170729656|ref|YP_001775089.1| DNA polymerase I [Xylella fastidiosa M12]
gi|71163142|gb|EAO12863.1| DNA polymerase A [Xylella fastidiosa Dixon]
gi|167964449|gb|ACA11459.1| DNA-directed DNA polymerase [Xylella fastidiosa M12]
Length = 923
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 227/459 (49%), Gaps = 40/459 (8%)
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
R C + KLL L IE+PLV VL +E G+ +D E + L +++
Sbjct: 500 RLHCVLAPKLLAEPILERVYREIEMPLVAVLERIEANGVQIDAEELYKQSADLSRRMVIA 559
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
++KA LAG F+L + + +L+ LKLP+ KG+ PST++ L+ + +H +
Sbjct: 560 QQKAMDLAGRHFNLDSPKQLQVLLFDELKLPVVVKTPKGQ--PSTNEEALEAIVDQHALP 617
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
VI E+R+LAKL N + + + +H ++ Q ATGRLS +PNLQ +
Sbjct: 618 RVILEYRSLAKLRNTYTEKLPEM----IHPHTGRVHTNYHQAGAATGRLSSSDPNLQNIP 673
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
D + R F PS L+A DYSQIELR+MAH S D
Sbjct: 674 ----------------IRTDDGRRIRRAFVAPSGRK--LIACDYSQIELRIMAHLSGDAG 715
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ DV IAA GR D V ER K + +G++YGM L+ QL S
Sbjct: 716 LVDAFES-GVDVHCAIAAEVFGRGIDEVTPNERRAAKAINFGLIYGMSAFGLARQLGISR 774
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
EA++ I + F GV ++ +GYVE++ GR+ +L+ I GN +++ A+R
Sbjct: 775 GEAQDYIALYFDRFSGVRDFMENTRQQARDRGYVETVFGRRLYLNSIASGNQTQRAGAER 834
Query: 2076 QAVNSICQGSAADIIKIAMINIHSII-VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
A+N+ QG+AADIIK AM+ + + VGG + R ++LQVHDELV
Sbjct: 835 AAINAPMQGTAADIIKRAMVAVDGWLGVGG--------------HRERALMILQVHDELV 880
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E D + V V M +AA L VPL+V + VG W
Sbjct: 881 FEADEGFVPTLVHEVSARMAAAAQLRVPLVVDVGVGHHW 919
>gi|384155897|ref|YP_005538712.1| DNA polymerase I [Arcobacter butzleri ED-1]
gi|345469451|dbj|BAK70902.1| DNA polymerase I [Arcobacter butzleri ED-1]
Length = 896
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 173/579 (29%), Positives = 278/579 (48%), Gaps = 62/579 (10%)
Query: 1606 KVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPD 1665
++ ++ K+A + + R+ L L E + ++F + L+ D I+SW+L +
Sbjct: 373 QISLEAAKNAIIQLNRYK-LVLQNFKYDYEIIKNNF----DIELRLYADTMILSWLLNTN 427
Query: 1666 DERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWK- 1724
++ + ++K ++ S + RA C A+ + L+K
Sbjct: 428 EKVGLDYQIDKYFDHKMISFTDVVKKGENFSNVDIERA-----CEYAAEDALMTLRLFKK 482
Query: 1725 ------LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKK 1778
EE++ +E + VLA+ME+ GI VD+ + + L K + L K
Sbjct: 483 QLEIFKEKEEEEILNLAFEVEFDFIYVLANMEMNGIKVDVNLLKEYKELSNKNINELTAK 542
Query: 1779 AYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVI 1838
Y +G++F++ + + +L+ L LP + K K STD+ L+ L +EH ++P++
Sbjct: 543 IYQTSGVEFNINSPKQLGALLFETLGLPTAK---KTKTGYSTDEAVLNGLINEHEVIPLL 599
Query: 1839 KEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMV 1898
++R KL + + + L S + +H +L T TATGRLS + PNLQ +
Sbjct: 600 LQYREAYKLQSTYIEPLLELGSKSDDNR---IHTSFLHTGTATGRLSSKNPNLQNIPTKS 656
Query: 1899 EFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIG 1958
+ I R FIP ++ + L+A DYSQIELRL+AHFS+D AL+
Sbjct: 657 D-----------------SNIQIRKAFIP-KDGYKLVAVDYSQIELRLLAHFSQDKALVE 698
Query: 1959 LLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEA 2018
D+ A + G ++R K + +G+LYGMG L E L S EA
Sbjct: 699 AFENDL-DIHYQTAVKIFGEEN---AKEKRGIAKSINFGLLYGMGSKKLGETLGIPSKEA 754
Query: 2019 KEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAV 2078
K+ I S+ +F V +L H GYV++L RKR L N K+ R+AV
Sbjct: 755 KQYIDSYFEAFKSVKDYLKSIEDFAHINGYVKTLLNRKR-LFDFNSANAMMKAAYLREAV 813
Query: 2079 NSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVD 2138
N++ QGSAAD+IK+AMINI+ YK + ++ +LLLQ+HDELV EV
Sbjct: 814 NTLFQGSAADLIKLAMINIYQ-----KYKDNENI-----------KLLLQIHDELVFEVK 857
Query: 2139 PSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
++E ++ ME+ L VPL V + VGS+W L+
Sbjct: 858 DEFVEEITFSIKNIMENIYKLNVPLKVSLSVGSSWKDLK 896
>gi|421091485|ref|ZP_15552256.1| DNA-directed DNA polymerase [Leptospira kirschneri str. 200802841]
gi|409999813|gb|EKO50498.1| DNA-directed DNA polymerase [Leptospira kirschneri str. 200802841]
Length = 917
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 168/557 (30%), Positives = 277/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLS 1683
G N+ + LEN G LL+ + D + S++L P+ R + +L KE L+
Sbjct: 408 GQNIKYDLIVLENHG---FLLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEF---LN 457
Query: 1684 SEAAAAANR--SGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
+ +G+ K ++ A+ + L+++ + + +E +L
Sbjct: 458 YNTITYDDLVGTGKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 518 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHKQAGGPFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ +LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 578 ILFDNLKLRIVKKTQTGF---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 635 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 673
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA+ L + HG D+ AA
Sbjct: 674 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAM--LEAYNHGLDIHKRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPEIDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 792 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 852 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 897 MSLDLPIVVEGKFGVNW 913
>gi|405375773|ref|ZP_11029795.1| DNA polymerase I [Chondromyces apiculatus DSM 436]
gi|397085938|gb|EJJ17096.1| DNA polymerase I [Myxococcus sp. (contaminant ex DSM 436)]
Length = 909
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 191/608 (31%), Positives = 295/608 (48%), Gaps = 68/608 (11%)
Query: 1575 PEHQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGL 1634
P+ Q + R ++G K D FT + VL+ AAV + GG +L SL L
Sbjct: 359 PDGQTAYVPLRHAQLGVTQVKPDA--FTTAFRA---VLEDAAV---KKGGHDLKALSLVL 410
Query: 1635 ENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAA--AANR 1692
N G + L H D+ ++S++L P + +L +E RL +E AA
Sbjct: 411 ANDG---ITLRGAH----DDVELLSYLLNPSRREHALVDLSRE---RLFTELPPLPAAAE 460
Query: 1693 SGRWKNQMRRAAHN------GCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVL 1746
R K A H G R R L LWK L +L + ++E+PL+ +L
Sbjct: 461 GKRGKKDRALADHTVEEVATGFAIRAEAARRLAPELWKELEVAKLADLARDLELPLLPLL 520
Query: 1747 ADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLP 1806
A ME G+ +D + + + K+ Y AG +F++ + + +VL+ LKLP
Sbjct: 521 AQMEQRGVLLDTAELSRTSVKVDAAVETQVKEVYRHAGREFNIGSNPQLVDVLFNELKLP 580
Query: 1807 IPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQ 1866
I KGK PS D+ L+ L EHP+ I E+R+L+KL + L ++ +L
Sbjct: 581 I---IKKGKTGPSADQEVLEKLSEEHPLPGAIIEYRSLSKLKSTYLDTLPTLV-----AA 632
Query: 1867 KYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFI 1926
+H + Q +TATGRLS +PNLQ + V ++ E R F+
Sbjct: 633 DGRIHTTYHQAATATGRLSSTDPNLQNIP--VRTELGRE---------------IRRAFV 675
Query: 1927 PSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQ 1986
+ E L++ADYSQ+ELRL+AH + D LI D+ T AA G D V +
Sbjct: 676 -AAEGHQLVSADYSQVELRLLAHIADDAVLIEAFRHDE-DIHTRTAAEVFGVPTDKVDRE 733
Query: 1987 ERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQK 2046
+R K + +GI YG+ P+ LS +L + + A++ I+ + + G+ +L VS +
Sbjct: 734 QRRVAKMVNFGIAYGLSPHGLSARLGIAQDVARDIIERYFIRYAGIKRYLEETVSVARKT 793
Query: 2047 GYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVY 2106
GYVE+L GR+R+++ + N A+R A+N QG+AAD+IK AM+ +
Sbjct: 794 GYVETLYGRRRYMADLNSKNRGVAQAAERAAINMPIQGTAADLIKKAMLAV--------- 844
Query: 2107 KPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVK 2166
D++L A K R R+LLQVHDEL+ E + +++ +L + M S A L VPL V
Sbjct: 845 --DAALTAQ----KLRTRMLLQVHDELLFEAPDAEVEQVKALAVQAMSSVADLKVPLKVD 898
Query: 2167 IQVGSTWG 2174
+ G +W
Sbjct: 899 VGAGRSWA 906
>gi|256854276|ref|ZP_05559640.1| DNA polymerase I [Enterococcus faecalis T8]
gi|307275295|ref|ZP_07556438.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2134]
gi|307290893|ref|ZP_07570783.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0411]
gi|422685454|ref|ZP_16743670.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4000]
gi|256709836|gb|EEU24880.1| DNA polymerase I [Enterococcus faecalis T8]
gi|306497963|gb|EFM67490.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0411]
gi|306507929|gb|EFM77056.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2134]
gi|315029747|gb|EFT41679.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4000]
Length = 882
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 453 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 512
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 513 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 569
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 570 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 624
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 625 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 667
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V R Q K + +GI+YG+
Sbjct: 668 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTPNMRRQAKAVNFGIVYGISDY 725
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 726 GLSQNLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 785
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 786 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMARRLKEEKLQATM 830
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 831 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 878
>gi|374334321|ref|YP_005091008.1| DNA polymerase I [Oceanimonas sp. GK1]
gi|372984008|gb|AEY00258.1| DNA polymerase I [Oceanimonas sp. GK1]
Length = 911
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/450 (32%), Positives = 240/450 (53%), Gaps = 42/450 (9%)
Query: 1726 LVSEELIEALLN-IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAG 1784
L +E ++E++ N IE+PLV +LA ME G+ +D + + K+L+ LE++A+ LAG
Sbjct: 498 LAAEPVLESVFNDIEMPLVPILAQMEYTGVRIDSQLLAMQSEEIAKRLKELEREAFELAG 557
Query: 1785 MKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTL 1844
F+L + + +L+ L LP+ + KG PST + L L ++P+ ++ E+R L
Sbjct: 558 EPFNLSSTKQLGEILFTKLALPVIKKTPKGA--PSTAEEVLQELALDYPLPKLLMEYRGL 615
Query: 1845 AKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN 1904
+KL + + + ++ +H + Q +TATGRLS +PNLQ +
Sbjct: 616 SKLKSTYTDKLP----LMVNEHSGRIHTSYHQANTATGRLSSSDPNLQNIPIRTP----- 666
Query: 1905 EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
+ +I R F+ ++ + L+AADYSQIELR+MAH S+D L+ + H
Sbjct: 667 ----------EGRRI--RQAFV-AEPGYKLVAADYSQIELRIMAHLSQDQGLLDAFA--H 711
Query: 1965 G-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIK 2023
G D+ AA G + + V +++R + K + +G++YGM L+ QL NEA++ +
Sbjct: 712 GQDIHKATAAEVFGVAVEQVSAEQRRRAKAINFGLIYGMSAFGLARQLGIGRNEAQDYMN 771
Query: 2024 SFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQ 2083
+ +PGV ++ ++GYV +L GR+ +L +IK N + A+R A+N+ Q
Sbjct: 772 IYFERYPGVLRYMETTREQASEQGYVSTLFGRRLYLPEIKSKNGARRKGAERAAINAPMQ 831
Query: 2084 GSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIK 2143
G+AADIIK AMI ++ + ++ +G R+L+QVHDELV E+ +
Sbjct: 832 GTAADIIKQAMIRVNDWL--------------GELPEGEVRMLMQVHDELVFEIREDKVD 877
Query: 2144 EAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+ M+ AA L VPLLV+ VG W
Sbjct: 878 AHRETICALMQQAASLDVPLLVEAGVGDNW 907
>gi|261856277|ref|YP_003263560.1| DNA polymerase I [Halothiobacillus neapolitanus c2]
gi|261836746|gb|ACX96513.1| DNA polymerase I [Halothiobacillus neapolitanus c2]
Length = 940
Score = 228 bits (582), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 232/462 (50%), Gaps = 44/462 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDM-EGCLQARNLLQKKL 1772
T L LW KL V +L IE PL+ VL ME G+ VD E +Q + + +++
Sbjct: 518 TGQLQQCLWPKLSVEPDLRSVYETIEQPLIEVLVAMERAGVRVDRGELAIQGKAI-GERI 576
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+E+ A+ AG +F+L + + +L+ LKLP+ G K PSTD+ L L H
Sbjct: 577 AAVEQAAFKEAGREFNLGSTKQLKELLFDELKLPV--GKKTPKGEPSTDEEALGELVGSH 634
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
P+ +I ++R L+KL + + + + T +H + Q TATGRLS PNLQ
Sbjct: 635 PLPALILDYRGLSKLKSTYIDRLPE----DIHTHTGRVHSAFHQAVTATGRLSSSNPNLQ 690
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ E I CK L++ADYSQIELR+MAH S+
Sbjct: 691 NIPIRSE---EGRRIRQAFVADPGCK---------------LISADYSQIELRIMAHLSE 732
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D L + D+ AA G E V +R K + +G++YGM L++QL+
Sbjct: 733 DERLCAAFAAGE-DIHRATAAEVFGVKEVEVSDNQRRAAKAINFGLIYGMSAFGLAKQLD 791
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
EA+ I + + +PGVA ++ Q GYVE++ GR+ +L +I N + +
Sbjct: 792 VPRGEAQAYIDLYFARYPGVAKYMERMRQQARQMGYVETVFGRRLYLPEIHSRNGQRRQY 851
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QG+AADIIKIAMI +H ++V + GR R++LQVHDE
Sbjct: 852 AERTAINAPMQGTAADIIKIAMIALHKLLV----------------VPGRARMILQVHDE 895
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
L+ EV S + E +++ M AA L VPL V I +G +W
Sbjct: 896 LIFEVPESDVAEIEPIIRAQMTGAAKLNVPLEVGIGIGRSWA 937
>gi|422696554|ref|ZP_16754511.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1346]
gi|315174878|gb|EFU18895.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1346]
Length = 882
Score = 228 bits (582), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 453 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 512
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 513 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 569
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 570 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 624
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 625 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 667
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V R Q K + +GI+YG+
Sbjct: 668 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTPNMRRQAKAVNFGIVYGISDY 725
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS+ L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 726 GLSQNLGITREQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 785
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 786 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMAHRLKEEKLQATM 830
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 831 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 878
>gi|406675197|ref|ZP_11082387.1| DNA polymerase I [Aeromonas veronii AMC35]
gi|404627967|gb|EKB24756.1| DNA polymerase I [Aeromonas veronii AMC35]
Length = 921
Score = 228 bits (582), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 239/460 (51%), Gaps = 40/460 (8%)
Query: 1715 TRALCSVLWKLLVSEE-LIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L LW L +E L + IE+PL+ VLA MEL G +D + Q ++ +L
Sbjct: 497 TLRLHQALWGKLSAEPGLAKVFSEIELPLLPVLARMELLGTTIDPKLLHQQSQEIELRLA 556
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LEK+A+ LAG +F+L + + +L+ L LPI + KG PST + L L +
Sbjct: 557 ELEKQAHELAGQEFNLSSPKQLGEILFTKLGLPIIKKTPKGA--PSTAEEVLAELAETYE 614
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ ++ EHR LAKL + + + + + +H + Q ATGRLS +PNLQ
Sbjct: 615 LPRLLMEHRGLAKLKSTYTDKLP----LMIKPRTGRVHTSYHQAVAATGRLSSSDPNLQN 670
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ + NE G R FIPS + L+AADYSQIELR+MAH S D
Sbjct: 671 I------PVRNEQ---GR--------RIRQAFIPSA-GYKLVAADYSQIELRIMAHLSGD 712
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
L+ ++ D+ AA G + D+V + R K + +G++YGM L++QL
Sbjct: 713 KGLLTAFAEGK-DIHKATAAEVFGVALDAVTTDMRRSAKAINFGLIYGMSAFGLAKQLGI 771
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ + + +PGV ++ +GYVE+L GR+ +L IK N + A
Sbjct: 772 GRAEAQKYMDLYFDRYPGVLEYMERTRQQAEAQGYVETLFGRRLYLPDIKSRNAGLRKAA 831
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AMIN+ S I G D S+ R+L+QVHDEL
Sbjct: 832 ERAAINAPMQGTAADIIKRAMINVDSWIRG---IEDESI-----------RMLMQVHDEL 877
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V E+ ++E +++++ M +AA L VPLLV+ G W
Sbjct: 878 VFEIREEKLEEYAAIIKEKMSAAAELHVPLLVEAGTGDNW 917
>gi|253827195|ref|ZP_04870080.1| DNA polymerase type I [Helicobacter canadensis MIT 98-5491]
gi|313141399|ref|ZP_07803592.1| DNA polymerase I [Helicobacter canadensis MIT 98-5491]
gi|253510601|gb|EES89260.1| DNA polymerase type I [Helicobacter canadensis MIT 98-5491]
gi|313130430|gb|EFR48047.1| DNA polymerase I [Helicobacter canadensis MIT 98-5491]
Length = 896
Score = 228 bits (582), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 263/528 (49%), Gaps = 58/528 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVA 1713
D +++W+L D + NL+ +KK + E + G+ +N + C
Sbjct: 423 DSMLLAWLLQSD----TLCNLDFLMKKYFNHEMIHYKDIVGKNENFSNILIQHACEYASE 478
Query: 1714 QTRALCSVLWKL--LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
A + +KL L+ E L+E +E P + L +MEL GI +D+E L ++K
Sbjct: 479 DAAACYQLYFKLRGLMDESLLEIAQKVEFPFIQSLMNMELSGIKIDLEYFLGLNAETREK 538
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L + ++ + LA +F+L + +A++L+ LKL E K K ST + L+ L
Sbjct: 539 LHQISEEIFVLANKRFNLNSPQQLASILFDDLKL---EASKKTKSGYSTSELVLNSLYDS 595
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
HPI+P I E+R KL + + + A+ + + YT ++QT T+TGRLS + PNL
Sbjct: 596 HPIIPKILEYRESFKLYSTYIEPLIEHAKSDLEHRIYT---SFMQTGTSTGRLSSKNPNL 652
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + + I G FI ++EN +L++ DYSQIELRL+AHFS
Sbjct: 653 QNIPVKT---LEGRRIRKG--------------FI-AKENCLLISLDYSQIELRLLAHFS 694
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
+D A+I + D+ A + G + + ++R K + +G++YGMGP LSE L
Sbjct: 695 QDKAMIDAFLQD-ADIHLETAKKIFG---EEMAQEKRAVAKSINFGLIYGMGPKKLSETL 750
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
+ EAK I+++ +SFP + ++L + GY ++L GR R K F +E
Sbjct: 751 KINFQEAKTYIQNYFTSFPMIKNFLKEQEEFILENGYSKTLLGRMR---KFDFEGVQEYQ 807
Query: 2072 KAQ--RQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQV 2129
KA R+ +N+I QGSAADIIK+AM I SSL + +LLLQV
Sbjct: 808 KAAFLREGINAIFQGSAADIIKMAMNKIMH----------SSLES---------KLLLQV 848
Query: 2130 HDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
HDEL+ E + + + ME+ A L VPL I +G WG L+
Sbjct: 849 HDELIFEAPKEIASKEAKKIALIMENIATLRVPLKCSISIGENWGELK 896
>gi|403384342|ref|ZP_10926399.1| DNA polymerase I [Kurthia sp. JC30]
Length = 873
Score = 228 bits (582), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 235/466 (50%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
CR+ + L + L +E E IE+PL +L DME G+ VD + ++
Sbjct: 444 VCRKALAVWNVMPKLAETLQEKEQFELYKTIELPLALILCDMECAGVAVDEQCLVEMGQE 503
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L KL +E+K Y LAG +F++ + + VL+ L LPI + K K ST L+
Sbjct: 504 LTSKLAAIEQKIYALAGTQFNINSPKQLGVVLFETLGLPIIK---KTKTGYSTAADVLEK 560
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ EH ++ I E+R L KL N T I L ++ + + + +H + Q TATGRLS
Sbjct: 561 LQPEHEVIDYILEYRQLGKL-NSTY--IEGLLKV-VHEKDHKIHTRYQQALTATGRLSSV 616
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R F+PS E W L +ADYSQIELR++
Sbjct: 617 DPNLQNIPIRLE---------------EGRKI--RQAFVPSHEGWTLFSADYSQIELRVL 659
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
A + + LI K D+ T A G +++ V R Q K + +GI+YG+ L
Sbjct: 660 ADMADEQNLIDAF-KHDLDIHTKTAMDVFGVAKEDVTPNMRRQAKAVNFGIVYGISDYGL 718
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S+ L + EA E I+ + S+PGV ++ V+ + GYV +L R+R+L + N
Sbjct: 719 SQNLGITRKEAAEFIERYFESYPGVKGYMESVVAQAKKDGYVTTLLNRRRYLPDLNSRNF 778
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK AMI+ +AA + + +LL
Sbjct: 779 NIRSFAERTAMNTPIQGTAADIIKKAMID---------------MAAALKAHNLQSTMLL 823
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDEL+ E P + LV + ME A L VPL G+TW
Sbjct: 824 QVHDELIFEAPPEEVDILAKLVPEVMEHAVALKVPLKADAASGATW 869
>gi|352517679|ref|YP_004886996.1| DNA polymerase I [Tetragenococcus halophilus NBRC 12172]
gi|348601786|dbj|BAK94832.1| DNA polymerase I [Tetragenococcus halophilus NBRC 12172]
Length = 881
Score = 228 bits (582), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/467 (32%), Positives = 246/467 (52%), Gaps = 42/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L L L + ++ N+E P+ ++LA+ME+ GI VD + Q ++
Sbjct: 452 LARKIKAIQWLTPKLEGELKDKNQLDLYKNLEAPISSILAEMEITGITVDAQRLNQMKDE 511
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+ L+ +E+K + AG KF++ + + ++L+ + LP+ + K K ST L+
Sbjct: 512 FAQSLQKIEEKIFEQAGEKFNINSPKQLGHILFEKMNLPVIK---KTKTGYSTAVDVLEQ 568
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I ++R +AK+ + + + + Q +H +LQT T TGRLS
Sbjct: 569 LKDKSPIVENILKYRQIAKIQSTYVEGLLKVI-----LQDGKVHTRYLQTLTQTGRLSSV 623
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R F+P + +W++ ++DYSQIELR++
Sbjct: 624 DPNLQNIPIRLE---------------EGRKI--RQAFVPQKHDWVIYSSDYSQIELRVL 666
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAAR-WTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
AH SKD L ++ + D+ A R + + V + R Q K + +GI+YG+
Sbjct: 667 AHVSKDEHLQEAFNE-NQDIHASTAMRVFDIEKPEDVTANIRRQAKAVNFGIVYGISDYG 725
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
LS+ L S EAK I ++ +PGV +++ +V +KG+ E+L R+R+L I N
Sbjct: 726 LSQNLGISRKEAKNYIDTYFERYPGVKKYMNDSVEQAKEKGFAETLYHRRRYLEDINSRN 785
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
+S A+R A+NS QGSAADI+KIAMI + + + L N +L
Sbjct: 786 FNLRSFAERTAINSPIQGSAADILKIAMIELDKQL------KEKQLETN---------ML 830
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LQVHDELV EV S +K LV++ ME+A L VPL+ + G TW
Sbjct: 831 LQVHDELVFEVPESELKTLDQLVKEVMENAVHLDVPLITESSWGKTW 877
>gi|452851759|ref|YP_007493443.1| DNA polymerase I [Desulfovibrio piezophilus]
gi|451895413|emb|CCH48292.1| DNA polymerase I [Desulfovibrio piezophilus]
Length = 886
Score = 228 bits (582), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 232/447 (51%), Gaps = 41/447 (9%)
Query: 1728 SEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKF 1787
S EL+ + ++EIPL+ L ME GIG+D+ + + + +L L + AG +F
Sbjct: 478 SAELVPLMRDLEIPLIPALVGMEKAGIGIDLTSFKEFLDDVSGQLDSLTRSIINHAGEEF 537
Query: 1788 SLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKL 1847
++ ++ +A VL+ LK+ GK+ ST L+ ++ HPIV I +R L KL
Sbjct: 538 NIRSSQQLAVVLFDTLKIKAGSKTATGKR--STANQVLEKIKDAHPIVEDILNYRMLEKL 595
Query: 1848 LNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDI 1907
+ L + L + LH H+ Q +TATGRLS +PNLQ N I
Sbjct: 596 RSTYLEPLPKLV-----DKNARLHTHFNQLATATGRLSSSKPNLQ-----------NIPI 639
Query: 1908 YGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDV 1967
G R F S+ N +L AADYSQIELR++AHFS+DPAL+ D+
Sbjct: 640 RGKYGP------RMRACFTASEGN-LLAAADYSQIELRVLAHFSQDPALLEAFRNDE-DI 691
Query: 1968 FTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKS 2027
T AA T +S + V ER K + +G++YGMG L+ +L EAKE + +
Sbjct: 692 HTRTAALLTDKSPEEVLPDERRNAKTINFGLIYGMGVQKLARELKIKQTEAKEFTERYFE 751
Query: 2028 SFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAA 2087
+ ++ VS + G+V +L GR+R L ++ N S+A+RQAVN++ QG+AA
Sbjct: 752 KLSTLKAYYDTIVSDAQEHGFVTTLAGRRRLLPELHSKNTMLASEARRQAVNTVIQGTAA 811
Query: 2088 DIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVS 2147
DIIK+AM+ H+ D LAA +L+LQVHDEL++E + I+ A +
Sbjct: 812 DIIKMAMVAAHT---------DKQLAAL------GAKLILQVHDELIVEAPEAHIEAAGA 856
Query: 2148 LVQKCMESAALLLVPLLVKIQVGSTWG 2174
+ + M+ AA L VPL V + V WG
Sbjct: 857 RLVEIMQDAADLAVPLKVDMGVAKDWG 883
>gi|157737513|ref|YP_001490196.1| DNA polymerase I [Arcobacter butzleri RM4018]
gi|157699367|gb|ABV67527.1| DNA polymerase I [Arcobacter butzleri RM4018]
Length = 896
Score = 228 bits (582), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 173/579 (29%), Positives = 278/579 (48%), Gaps = 62/579 (10%)
Query: 1606 KVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPD 1665
++ ++ K+A + + R+ L L E + ++F + L+ D I+SW+L +
Sbjct: 373 QISLEAAKNAIIQLNRYK-LVLQNFKYDYEIIKNNF----DIELRLYADTMILSWLLNTN 427
Query: 1666 DERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWK- 1724
++ + ++K ++ S + RA C A+ + L+K
Sbjct: 428 EKVGLDYQIDKYFDHKMISFTDVVKKGENFSNVDIERA-----CEYAAEDALMTLRLFKK 482
Query: 1725 ------LLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKK 1778
EE++ +E + VLA+ME+ GI VD+ + + L K + L K
Sbjct: 483 QLEIFKEKEEEEILNLAFEVEFDFIYVLANMEMNGIKVDVNLLKEYKELSNKNINELTAK 542
Query: 1779 AYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVI 1838
Y +G++F++ + + +L+ L LP + K K STD+ L+ L +EH ++P++
Sbjct: 543 IYQTSGVEFNINSPKQLGALLFETLGLPTAK---KTKTGYSTDEAVLNGLINEHEVIPLL 599
Query: 1839 KEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMV 1898
++R KL + + + L S + +H +L T TATGRLS + PNLQ +
Sbjct: 600 LQYREAYKLQSTYIEPLLELGSKSDDNR---IHTSFLHTGTATGRLSSKNPNLQNIPTKS 656
Query: 1899 EFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIG 1958
+ I R FIP ++ + L+A DYSQIELRL+AHFS+D AL+
Sbjct: 657 D-----------------STIQIRKAFIP-KDGYKLVAVDYSQIELRLLAHFSQDKALVE 698
Query: 1959 LLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEA 2018
D+ A + G ++R K + +G+LYGMG L E L S EA
Sbjct: 699 AFENDL-DIHYQTAVKIFGEEN---AKEKRGIAKSINFGLLYGMGSKKLGETLGIPSKEA 754
Query: 2019 KEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAV 2078
K+ I S+ +F V +L H GYV++L RKR L N K+ R+AV
Sbjct: 755 KQYIDSYFEAFKSVKDYLKSIEDFAHINGYVKTLLNRKR-LFDFNSANAMMKAAYLREAV 813
Query: 2079 NSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVD 2138
N++ QGSAAD+IK+AMINI+ YK + ++ +LLLQ+HDELV EV
Sbjct: 814 NTLFQGSAADLIKLAMINIYQ-----KYKDNENI-----------KLLLQIHDELVFEVK 857
Query: 2139 PSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
++E ++ ME+ L VPL V + VGS+W L+
Sbjct: 858 DEFVEEITFSIKNIMENIYKLNVPLKVSLSVGSSWKDLK 896
>gi|313893738|ref|ZP_07827305.1| DNA-directed DNA polymerase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441752|gb|EFR60177.1| DNA-directed DNA polymerase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 873
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 157/467 (33%), Positives = 234/467 (50%), Gaps = 40/467 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
C V A+ V + EEL IE+PL++ L ME GI +D E +
Sbjct: 444 CVSMVKALLAMNEVACESARREELWSLYETIELPLIHTLVVMEKNGIYIDTEKLAETTAR 503
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+++L ++++ Y +AG F++ + + +L+ + LPI + K K STD LD+
Sbjct: 504 FKEELAQVQQEIYDIAGETFNINSPKQLGVILFEKMNLPIIK---KTKTGYSTDAEVLDM 560
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
LRHE PIV I +R++AKL++ + C + ++ + +H + Q TATGRLS
Sbjct: 561 LRHESPIVEKILAYRSVAKLVS----TYCEGLAVLINDKTKRIHTTFNQMVTATGRLSSS 616
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + E E+ R F P L++ADYSQIELR++
Sbjct: 617 DPNLQNIPVRTE----------KGREI-------RALFYPGAGYDTLVSADYSQIELRIL 659
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D ALI + D+ AA G+S++ V S+ER K + +GI+YG+ L
Sbjct: 660 AHLSGDEALIKAFVEGK-DIHRFTAAEVLGKSQEDVTSEERSHAKAINFGIIYGISDFGL 718
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S L + EAK I + S +P V ++ V H+ G V ++ GR+R L I N
Sbjct: 719 SRDLGITRGEAKNYIDLYFSRYPKVKEYMDRMVQEAHETGKVRTMFGRQRELPDINSRNF 778
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK+AM + + G NF RLLL
Sbjct: 779 NRRSFAERTAMNTPIQGTAADIIKLAMNQVEQKLEEG----------NFT-----SRLLL 823
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
QVHDELVLEV S ++ L++ M+S L V L+V + W
Sbjct: 824 QVHDELVLEVVNSELEAVEELLRTTMQSVVELQVHLIVDVHHAENWA 870
>gi|336313795|ref|ZP_08568717.1| DNA polymerase I [Rheinheimera sp. A13L]
gi|335881734|gb|EGM79611.1| DNA polymerase I [Rheinheimera sp. A13L]
Length = 925
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 239/460 (51%), Gaps = 40/460 (8%)
Query: 1715 TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L LW +L ++ + +IE+PLV +L+ ME G+ +D Q L K++
Sbjct: 501 TLRLHQTLWPMLAQHSGLQKVFRDIEMPLVPILSKMERTGVKIDGNLLAQQSMDLAKRIG 560
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
+E++AY +AG +F+L + + +L+ + LP+ + G PST + L L H++
Sbjct: 561 EIEQEAYQMAGKEFNLSSPKQLQEILFEQMGLPVLKKTPTGT--PSTAEEVLAELAHDYE 618
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+I EHR L+KL + + +S++ +H + Q ATGRLS EPNLQ
Sbjct: 619 FPKLITEHRGLSKLKSTYTDKLP----LSVNPATGRVHTSYHQAVAATGRLSSTEPNLQN 674
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+ E + +I R FI ++ +LA DYSQIELR+MAH S+D
Sbjct: 675 IPIRSE---------------EGRRI--RQAFI-AEAGKTILAIDYSQIELRIMAHLSRD 716
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
PAL+ ++ D+ AA G + D V S++R + K + +G++YGM L+ QL
Sbjct: 717 PALLNAFAQGK-DIHRATAAEVFGVALDQVSSEQRRRAKAVNFGLIYGMSAFGLARQLGI 775
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
S +EA++ + + FPGV ++ + H++GYVE+L GR+ +L +I N K A
Sbjct: 776 SRSEAQQYVDLYFERFPGVLDYMERTRTQAHEQGYVETLFGRRLYLPEINAKNMARKKGA 835
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK+AMI + A + G +++QVHDEL
Sbjct: 836 ERAAINAPMQGTAADIIKMAMIKVA--------------AWQEKQPAGVVAMIMQVHDEL 881
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V EV ++ S + M+SAA L VPLL + G W
Sbjct: 882 VFEVKTEELERVSSDLVNIMQSAASLDVPLLAEAGSGPNW 921
>gi|269468158|gb|EEZ79860.1| DNA polymerase I [uncultured SUP05 cluster bacterium]
Length = 916
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 273/528 (51%), Gaps = 52/528 (9%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D + S++L + ++ N++ L+ + ++ +G+ K Q+ AA
Sbjct: 429 DTMVKSYVL---NSVATRHNMDDLSMHYLNHQTIHFSDVAGKGKKQITFNQVGLEAAFPY 485
Query: 1708 CCRRVAQTRALCSVLWKLLVS-EELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
C V T L VL + +V +L++ +E+PL+ VL ME G+ +D G L A+
Sbjct: 486 ACEDVIVTHELNKVLDEDIVQYPKLVKLYQVLEMPLIKVLLRMERNGVEID-AGLLNAQQ 544
Query: 1767 L-LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCL 1825
L + K++ ++ +A+ LAG F+L + I +L+ L + K PST++ L
Sbjct: 545 LDVVKQMNEIQSQAFELAGDAFNLESPKQIQQILFSEEGLGLEAKKKTPKGAPSTNEEAL 604
Query: 1826 DLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLS 1885
LL +HP+V +I +RTL KL + L ++ +I ++T++ LH + Q TATGRLS
Sbjct: 605 KLL--DHPLVDLILSYRTLTKLNSTYLEALPK--QIDLNTKR--LHTSYHQAVTATGRLS 658
Query: 1886 MEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELR 1945
PNLQ + E +I R FI + N +++AADYSQIELR
Sbjct: 659 SSNPNLQNIPIRTELG---------------ARI--RGAFIAGKGN-VIIAADYSQIELR 700
Query: 1946 LMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
+MAH S+D +LI + DV + A+ + V R K + +G++YGM
Sbjct: 701 IMAHISQDKSLIEAFNN-DVDVHSATASMMFNVPIEEVNKDHRRNAKAINFGLIYGMSAF 759
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
L++Q+N S EAK+ I ++ ++PGV +++ + +GYVE++ GR+ +L +I
Sbjct: 760 GLAKQINVSRTEAKQYIDAYFENYPGVLNYMDNIREAAKVQGYVETIMGRRLYLPQINAK 819
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N + A R A+N+ QGS+ADIIK AM+++H I G ++
Sbjct: 820 NKMLQQHALRTAINAPMQGSSADIIKKAMLDVHEWIGDG---------------NDEIKM 864
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++QVHDELV EV+ S E + +Q+ M +A L +PL+V + +G +W
Sbjct: 865 IMQVHDELVFEVNASKADEFANKIQELMANAYQLDIPLVVDVGIGDSW 912
>gi|24216324|ref|NP_713805.1| DNA polymerase I [Leptospira interrogans serovar Lai str. 56601]
gi|386075348|ref|YP_005989668.1| DNA polymerase I [Leptospira interrogans serovar Lai str. IPAV]
gi|24197598|gb|AAN50823.1|AE011518_2 DNA polymerase I [Leptospira interrogans serovar Lai str. 56601]
gi|353459140|gb|AER03685.1| DNA polymerase I [Leptospira interrogans serovar Lai str. IPAV]
Length = 917
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 277/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEV--KKR 1681
G N+ + LEN G +L+ + D + S++L P+ R + +L KE
Sbjct: 408 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEFLNYNT 460
Query: 1682 LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
++ E +G+ K ++ A+ + L+++ + + +E +L
Sbjct: 461 ITYEDLVG---TGKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 518 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGGPFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ +LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 578 ILFDNLKLRIVKKTQTGF---STDHEVLEELVGEHPIIEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 635 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 673
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 674 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHKRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPETDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 792 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 852 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 897 MSLDLPIVVEGKFGVNW 913
>gi|254876335|ref|ZP_05249045.1| DNA polymerase I [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254842356|gb|EET20770.1| DNA polymerase I [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 896
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/529 (30%), Positives = 272/529 (51%), Gaps = 55/529 (10%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVA 1713
D I++++L + S +++ K+ L E A +G +NQ+ + +VA
Sbjct: 410 DTMIMAYVL----KSSGKHDMDSLSKEHLGIEPIAYTTLAGTGRNQLTLDQID--IEKVA 463
Query: 1714 QTRA--------LCSVLWKLLVSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQA 1764
+ A L + K+L +E++ +L N+E+PL +L +ME G+ +D ++
Sbjct: 464 KYAAEDADITFRLYNHFLKMLKDDEVLYSLYSNVEMPLTIILNNMEKVGVKIDAAKLIEQ 523
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHC 1824
L+ ++ LE K Y LAG +F+L + + +L+ + LP + KG+ ST +
Sbjct: 524 SANLEDSIKELEIKCYDLAGQEFNLSSPVQLREILFDKMGLPPVKKTAKGQ--ASTSEEV 581
Query: 1825 LDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRL 1884
L L E+ I +I ++R L+KL N + + ++ +H + QT T TGRL
Sbjct: 582 LVQLAEEYEIAALIMKYRHLSKLKNTYTDKLPKMLDVNGR-----VHTSYNQTGTVTGRL 636
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S +PNLQ + + KI R FI QE + ++AADYSQIEL
Sbjct: 637 SSSDPNLQNIPI---------------KSPEGRKI--RQAFIAEQE-FCVVAADYSQIEL 678
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R+MAH SKD L+ ++ D+ + AA G S D V S++R + K + +G++YGM
Sbjct: 679 RIMAHLSKDKNLLKAFNQGL-DIHSATAAEVLGISLDMVTSEQRRRAKAINFGLIYGMSA 737
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
L++QL EA+E I + + +P V ++ A Q GYVE++ GR+ +L I
Sbjct: 738 FGLAKQLEIPRGEAQEYIDVYFNRYPSVKEYMTTAKEFAKQNGYVETILGRRLYLPDISS 797
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N +++ A+R A+N+ QG+AADIIK AMI+++++I+ Q +
Sbjct: 798 KNVIQRNAAERAAINAPMQGTAADIIKKAMIDVNTMIL--------------QEYNDDIK 843
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+++QVHDELV EV + + E + ++ ME++ L VPL V + G +W
Sbjct: 844 MVMQVHDELVFEVRKAKLNEITTKIKSIMETSVKLDVPLEVNVDSGESW 892
>gi|223932667|ref|ZP_03624666.1| DNA polymerase I [Streptococcus suis 89/1591]
gi|302024099|ref|ZP_07249310.1| DNA polymerase I [Streptococcus suis 05HAS68]
gi|386583689|ref|YP_006080092.1| DNA polymerase I [Streptococcus suis D9]
gi|223898637|gb|EEF64999.1| DNA polymerase I [Streptococcus suis 89/1591]
gi|353735835|gb|AER16844.1| DNA polymerase I [Streptococcus suis D9]
Length = 878
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 247/460 (53%), Gaps = 53/460 (11%)
Query: 1721 VLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEG--CLQARNLLQKKLRYLEKK 1778
+L KL +++L + L ++E+PL NVLA ME+ GI V+ E +Q+ N + + L K+
Sbjct: 461 MLTKLEENQQL-DLLFDMELPLANVLAKMEIAGIKVEAETLKAMQSEN--EVLIDQLTKE 517
Query: 1779 AYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVI 1838
Y LAG +F++ + + +L+ + LP+ E K K ST +D+L PI PV+
Sbjct: 518 IYELAGQEFNINSPKQLGTILFEEMGLPL-EYTKKTKTGYST---AVDVLERLAPIAPVV 573
Query: 1839 K---EHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
E+R + KL + + L + K +H ++Q T TGRLS +PNLQ +
Sbjct: 574 SKILEYRQITKLQST---YVVGLQDAILEDGK--IHTRYVQDLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
++ ++ R F+PS EN +LLA+DYSQIELR++AH S+D
Sbjct: 629 ----------------VRLEQGRL-IRKAFVPSLENSVLLASDYSQIELRVLAHISQDKH 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
LI + D+ T A R G ++ED V +R K + +G++YG+ LS L
Sbjct: 672 LIEAFQQ-GADIHTSTAMRVFGIEKAED-VTPNDRRNAKAVNFGVVYGISDFGLSNNLGI 729
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
+ EAK I ++ FPG+ +++ V KGYVE++ R+R L I N ++ A
Sbjct: 730 TRKEAKAYIDTYFERFPGIKNYMETIVREARDKGYVETIYKRRRELPDINSRNFNVRNFA 789
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+NS QGSAADI+K+AMIN+ + ++ LA R+LLQVHDE+
Sbjct: 790 ERTAINSPIQGSAADILKVAMINLDKALT------EAGLA---------TRMLLQVHDEI 834
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VLEV + ++ ++V++ MESA L VPL+ GSTW
Sbjct: 835 VLEVPVAELETVKAMVKETMESAISLSVPLIADENEGSTW 874
>gi|425071066|ref|ZP_18474172.1| DNA polymerase I [Proteus mirabilis WGLW4]
gi|404599891|gb|EKB00344.1| DNA polymerase I [Proteus mirabilis WGLW4]
Length = 949
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 237/437 (54%), Gaps = 39/437 (8%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+PLV VL+ ME G+ +D + + ++L +EK+ + LAG +F+L + +
Sbjct: 548 DIEMPLVPVLSRMERKGVLIDAQVLAMQSQEITQRLAEIEKETFALAGQEFNLSSPKQLQ 607
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L+ L LPI + KG PST++ L+ L H H + +I EHR LAKL + +
Sbjct: 608 EILFEKLNLPIIKKTPKGA--PSTNEEVLEALAHSHKLPRLILEHRGLAKLKSTYTDKLP 665
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
+ ++++ +H + Q TATGRLS +PNLQ + + NE+ G
Sbjct: 666 ----LMVNSKTKRVHTSYHQAVTATGRLSSRDPNLQNI------PVRNEE---GR----- 707
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R FI +++ + ++AADYSQIELR+MAH S+D L+ ++ D+ A+
Sbjct: 708 ---RIRQAFI-ARDGFKIVAADYSQIELRIMAHLSQDKGLLDAFAQ-GKDIHRATASEVF 762
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G D V +++R K + +G++YGM LS+Q+ EA+ + + +PGV ++
Sbjct: 763 GIPLDEVTAEQRRSAKAINFGLIYGMSAFGLSQQIGVERKEAQRYMDLYFERYPGVLDYM 822
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
Q+GYVE+L GR+ +L +I N + ++R+A+N+ QG+AADIIK AMI
Sbjct: 823 ERTRKQASQQGYVETLDGRRLYLPEINSKNAIRRKASEREAINAPMQGTAADIIKKAMIA 882
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
+ + I PD +++QVHDELV EV S +++A ++ K MES+
Sbjct: 883 VDNWICHEC--PDD------------VHMIMQVHDELVFEVRESYLEKANVMIHKLMESS 928
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +PL V++ VG+ W
Sbjct: 929 MELAIPLKVEVGVGNNW 945
>gi|37524397|ref|NP_927741.1| DNA polymerase I [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36783821|emb|CAE12681.1| DNA polymerase I [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 929
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 249/488 (51%), Gaps = 47/488 (9%)
Query: 1693 SGRWKNQM--RRAAHNGCCRRVAQ----TRALCSVLWKLLVSEELIE-ALLNIEIPLVNV 1745
+G+ KNQ+ + A A+ T L +W L +E LN E+PLV V
Sbjct: 478 AGKGKNQLTFNQVAVEQAAMYAAEDADVTLLLHQAMWPQLEKAPTLEKVFLNTEMPLVMV 537
Query: 1746 LADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKL 1805
L+ ME G+ +D + + +L LEK+A+ LAG F+L + + +L+ L+L
Sbjct: 538 LSRMERTGVLIDANILAEHSKEITARLDELEKEAHELAGEVFNLASPKQLQTILFEKLQL 597
Query: 1806 PIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMST 1865
P+ + G PST++ L+ L H + VI EHR LAKL + + + + T
Sbjct: 598 PVVKKTPNGA--PSTNEEVLEELADTHALPKVILEHRGLAKLKSTYTDKLPQM--VHPLT 653
Query: 1866 QKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFF 1925
++ +H + Q TATGRLS +PNLQ +I N E + + F
Sbjct: 654 KR--VHTSYHQAVTATGRLSSRDPNLQ-------------NIPVRNKEGRRIR---QAFV 695
Query: 1926 IPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGS 1985
P E + ++AADYSQIELR+MAH S+D L+ ++ D+ AA G + V S
Sbjct: 696 AP--EGYRIMAADYSQIELRIMAHLSQDQGLLKAFAEGK-DIHRATAAEVFGLPLEQVTS 752
Query: 1986 QERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQ 2045
++R K + +G++YGM LS QL EA+ + + +PGV +++ +
Sbjct: 753 EQRRSAKAINFGLIYGMSAFGLSRQLGIPRGEAQRYMDLYFERYPGVLAYMERTRKQAEE 812
Query: 2046 KGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGV 2105
+GYVE+L GR+ +LS IK N + A+R+A+N+ QG+AADIIK AMI + IV
Sbjct: 813 QGYVETLDGRRLYLSDIKSRNAMRRKAAEREAINAPMQGTAADIIKKAMIAVDDWIVSE- 871
Query: 2106 YKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLV 2165
+ + R+++QVHDELV EV S ++ A +++ ME + +L VPL V
Sbjct: 872 --------------EPKVRMIMQVHDELVFEVHESELEYAEQKIRELMEKSMVLDVPLKV 917
Query: 2166 KIQVGSTW 2173
+ +G W
Sbjct: 918 DVGIGDNW 925
>gi|429740271|ref|ZP_19273966.1| DNA-directed DNA polymerase [Prevotella saccharolytica F0055]
gi|429153674|gb|EKX96450.1| DNA-directed DNA polymerase [Prevotella saccharolytica F0055]
Length = 920
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 244/485 (50%), Gaps = 45/485 (9%)
Query: 1695 RWKNQ--MR----RAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLAD 1748
R KNQ MR A + C T L ++L L L E IE+PLV VLA+
Sbjct: 471 RGKNQKSMRDLPPTAVYEYACEDADITLRLKNLLEPKLQEAGLTELFYQIEMPLVPVLAE 530
Query: 1749 MELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIP 1808
MEL G+ +D + + +++ LE+ Y+LAG +F++ + + ++L+G +K+
Sbjct: 531 MELNGVRIDTHALKETSEIFTRRMHELEQSIYSLAGKEFNISSPKQVGDILFGEMKIIEK 590
Query: 1809 EGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKY 1868
K Q+ T + L LR +H IV I ++R L KLL + ++ L ++ +
Sbjct: 591 PKKTKTGQY-VTSEEVLQQLRGKHHIVAHILDYRALKKLLGTYVDALPKL----INPRTG 645
Query: 1869 TLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPS 1928
+H + QT TATGRLS +PNLQ + + ED E+ C FIP
Sbjct: 646 HIHTSFNQTITATGRLSSSDPNLQNI------PVRGED----GKEIRKC-------FIP- 687
Query: 1929 QENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQER 1988
+E +ADYSQIELR+MAH S+D ++ + + D+ AA+ G++ + V ER
Sbjct: 688 EEGCEFFSADYSQIELRVMAHLSQDENMLKAFREDY-DIHAATAAQIYGKAVEEVTRDER 746
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
+ KR +GI+YG+ L+++L+ EAK+ I + + +P V ++ + GY
Sbjct: 747 TKAKRANFGIIYGITAFGLADRLDIDRTEAKQLIDGYFAMYPRVHDYMEQSKEFARTHGY 806
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
VE+ R+R+L I GN + A+R A+N+ QGSAADIIK+AM+ I+
Sbjct: 807 VETFFHRRRYLPDINSGNGTVRGVAERNAINAPIQGSAADIIKVAMVRIYQ--------- 857
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
F R +++LQVHDEL V P + +V + M++A L VPL+
Sbjct: 858 ------RFHREHIRSKMILQVHDELNFSVFPEEKMQVERIVIEEMQAAYPLSVPLVADSG 911
Query: 2169 VGSTW 2173
G W
Sbjct: 912 WGKNW 916
>gi|330832426|ref|YP_004401251.1| DNA polymerase I [Streptococcus suis ST3]
gi|329306649|gb|AEB81065.1| DNA polymerase I [Streptococcus suis ST3]
Length = 878
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 247/460 (53%), Gaps = 53/460 (11%)
Query: 1721 VLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEG--CLQARNLLQKKLRYLEKK 1778
+L KL +++L + L ++E+PL NVLA ME+ GI V+ E +Q+ N + + L K+
Sbjct: 461 MLTKLEENQQL-DLLFDMELPLANVLAKMEIAGIKVEAETLKAMQSEN--EVLIDQLTKE 517
Query: 1779 AYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVI 1838
Y LAG +F++ + + +L+ + LP+ E K K ST +D+L PI PV+
Sbjct: 518 IYELAGQEFNINSPKQLGTILFEEMGLPL-EYTKKTKTGYST---AVDVLERLAPIAPVV 573
Query: 1839 K---EHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
E+R + KL + + L + K +H ++Q T TGRLS +PNLQ +
Sbjct: 574 SKILEYRQITKLQST---YVVGLQDAILEDGK--IHTRYVQDLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
++ ++ R F+PS EN +LLA+DYSQIELR++AH S+D
Sbjct: 629 ----------------VRLEQGRL-IRKAFVPSLENSVLLASDYSQIELRVLAHISQDKH 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
LI + D+ T A R G ++ED V +R K + +G++YG+ LS L
Sbjct: 672 LIEAFQQ-GADIHTSTAMRVFGIEKAED-VTPNDRRNAKAVNFGVVYGISDFGLSNNLGI 729
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
+ EAK I ++ FPG+ +++ V KGYVE++ R+R L I N ++ A
Sbjct: 730 TRKEAKAYIDTYFERFPGIKNYMETIVREARDKGYVETIYKRRRELPDINSRNFNVRNFA 789
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+NS QGSAADI+K+AMIN+ + ++ LA R+LLQVHDE+
Sbjct: 790 ERTAINSPIQGSAADILKVAMINLDKALT------EAGLA---------TRMLLQVHDEI 834
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VLEV + ++ ++V++ MESA L VPL+ GSTW
Sbjct: 835 VLEVPVAELETVKAMVKETMESAISLSVPLIADENEGSTW 874
>gi|87120949|ref|ZP_01076841.1| DNA polymerase I [Marinomonas sp. MED121]
gi|86163787|gb|EAQ65060.1| DNA polymerase I [Marinomonas sp. MED121]
Length = 925
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 242/460 (52%), Gaps = 42/460 (9%)
Query: 1715 TRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLR 1773
T L +W KL + EL+ IE+PLV VLA ME G +D + + + + +L
Sbjct: 503 TFRLHQAIWAKLEKTPELVSIFKEIELPLVPVLAKMEQTGALIDPDLLHEQSSEIATRLE 562
Query: 1774 YLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHP 1833
LE KA+ +AG F+L + + +L+ L+LPI + KG+ PST + L L ++
Sbjct: 563 ELEIKAHEMAGQAFNLSSPKQLQEILFVKLELPILKKTPKGQ--PSTAEPILQELALDYE 620
Query: 1834 IVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQC 1893
+ +I EHR+L+KL + + M + +H + Q TATGRLS +PNLQ
Sbjct: 621 LPRIIMEHRSLSKLKSTYTDKLPE-----MIQKTGRIHTSYHQAVTATGRLSSTDPNLQ- 674
Query: 1894 VEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKD 1953
+I AE + + F P E + L+AADYSQIELR+M+H S+D
Sbjct: 675 ------------NIPIRTAEGRRIR---QAFIAP--EGYKLIAADYSQIELRIMSHLSQD 717
Query: 1954 PALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
P L+ + + DV AA + D V ++R + K + +G++YGM L++QL
Sbjct: 718 PGLLEAFAN-NKDVHKATAAEVFEVALDEVTGEQRRRAKAINFGLIYGMSAFGLAKQLGI 776
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
EA++ I+ + +PGV +++ +KGYVE+L GR+ +L IK N + A
Sbjct: 777 GRPEAQKYIQRYFERYPGVRTYMENTREMAREKGYVETLFGRRLYLPDIKASNAMMRQAA 836
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+N+ QG+AADIIK AMI +H+ + D+ L +++LQVHDEL
Sbjct: 837 ERTAINAPMQGTAADIIKRAMIEMHA------WLKDTDL---------DIKMILQVHDEL 881
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+ EV S + A + ME+ + + VPLLV+ +G TW
Sbjct: 882 IFEVKESDLSAAQEKILDIMENTSAIDVPLLVEAGIGDTW 921
>gi|330718752|ref|ZP_08313352.1| DNA polymerase I [Leuconostoc fallax KCTC 3537]
Length = 896
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 227/440 (51%), Gaps = 41/440 (9%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+PL +VLADME GI VD + L ++ +EK Y AG +F++ + +
Sbjct: 495 DIELPLASVLADMEYTGIRVDQNQLQEMGESLDAQIVDVEKAIYEEAGEEFNINSPKQLG 554
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L+ + LP+ + G ST L+ L + PIV I ++R LAKL + + +
Sbjct: 555 ILLFEKMGLPVIKRTKTGY---STAVEVLEKLADQAPIVAYILQYRQLAKLKSTYIDGLL 611
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
++ + Q +H +LQT T TGRLS +PNLQ + E
Sbjct: 612 AV----VYRQDSKIHTRYLQTLTQTGRLSSVDPNLQNIPMRTE----------------- 650
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R F+PS+ NW + ADYSQIELR++AH + D L D+ + A
Sbjct: 651 AGRQIRKAFVPSEPNWQIFGADYSQIELRVLAHMTGDKNLQRAFLNDE-DIHSETARAVF 709
Query: 1977 GRSEDS-VGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASW 2035
G ++D+ + S +R K + +GI+YG+ LS L S EAK I ++ FP V W
Sbjct: 710 GLNDDAPITSLQRRAAKAVNFGIVYGISDFGLSNNLGISRAEAKRFIDTYFEKFPQVHEW 769
Query: 2036 LHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMI 2095
+ A + H++GYVE+L R+R+L I N +S A+R A+N+ QGSAADIIKIAMI
Sbjct: 770 MENAKTLAHEQGYVETLAKRRRYLPDIHAKNFNRRSFAERTAMNTPIQGSAADIIKIAMI 829
Query: 2096 NIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMES 2155
++ ++ + L A R+LLQVHDEL+ E S I E +V + M+S
Sbjct: 830 KMNQVL------HEHHLQA---------RMLLQVHDELIFEAPTSEIPELEEIVPQVMDS 874
Query: 2156 AALLLVPLLVKIQVGSTWGS 2175
A L VPL V+ + GS W S
Sbjct: 875 AVALDVPLKVESRHGSNWYS 894
>gi|145301031|ref|YP_001143872.1| DNA polymerase I [Aeromonas salmonicida subsp. salmonicida A449]
gi|418363147|ref|ZP_12963742.1| DNA polymerase I [Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|142853803|gb|ABO92124.1| DNA polymerase I [Aeromonas salmonicida subsp. salmonicida A449]
gi|356685587|gb|EHI50229.1| DNA polymerase I [Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 918
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 262/527 (49%), Gaps = 49/527 (9%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D + S++L + +S +++ K+ L E + + +G+ Q+ A
Sbjct: 430 DTMLESYVL---NSTASRHDMDSLAKRYLGVETTSFEDIAGKGVKQLTFNQIELEQAAPY 486
Query: 1708 CCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
T L LW +L L + IE+PL+ VLA MEL G +D + Q
Sbjct: 487 AAEDADITLRLHQTLWGQLEAVPGLCQVFSEIELPLLPVLARMELLGTTIDPKLLHQQSQ 546
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
++ +L LE++A+ LAG +F+L + + +L+ L LPI + KG PST + L
Sbjct: 547 EIELRLAELERQAHELAGQEFNLSSPKQLGEILFTKLGLPIIKKTPKGA--PSTAEEVLA 604
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L + + ++ EHRTLAKL + + + + Q +H + Q ATGRLS
Sbjct: 605 ELAETYELPRLLMEHRTLAKLKSTYTDKLP----LMIKPQTGRVHTSYHQAVAATGRLSS 660
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + + NE G R FIPS + L+AADYSQIELR+
Sbjct: 661 SDPNLQNI------PVRNEQ---GR--------RIRQAFIPSA-GYKLVAADYSQIELRI 702
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
MAH S D L+ ++ D+ AA G + D+V + R K + +G++YGM
Sbjct: 703 MAHLSGDKGLLTAFAEGK-DIHKATAAEVFGVALDAVTTDMRRSAKAINFGLIYGMSAFG 761
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
L++QL EA++ + + +PGV ++ +GYVE+L GR+ +L IK N
Sbjct: 762 LAKQLGIGRAEAQKYMDLYFERYPGVLEYMERTRQQAEAQGYVETLFGRRLYLPDIKSRN 821
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
+ A+R A+N+ QG+AADIIK AMIN+ I G D S+ R+L
Sbjct: 822 AGLRKGAERAAINAPMQGTAADIIKRAMINVDGWIRG---IEDESI-----------RML 867
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+QVHDELV E+ ++E +++++ M +AA L VPLLV+ G W
Sbjct: 868 MQVHDELVFEIREEKLEEYTAIIKEKMSAAAELHVPLLVEAGTGDNW 914
>gi|375087314|ref|ZP_09733694.1| DNA polymerase I [Megamonas funiformis YIT 11815]
gi|374561404|gb|EHR32744.1| DNA polymerase I [Megamonas funiformis YIT 11815]
Length = 882
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 235/457 (51%), Gaps = 40/457 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L +VL LV E+++ IE+PL +L DME GI ++ + + K++ LE+
Sbjct: 463 LSNVLADKLVDEKMVNLYEQIELPLAKMLCDMETVGIYINEQKLDDMNEQMYKQITALEQ 522
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
Y LAG F++ + + ++L+ L LP K K ST+ L+ L + HPI+
Sbjct: 523 DIYELAGEIFNINSPKQLGDILFNKLGLP---ALKKTKTGYSTNAEVLENLIYAHPIIAK 579
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHM 1897
I ++R L KL L + +L ++ Q +H + QT T TGRLS EPNLQ
Sbjct: 580 ILDYRMLNKLKTTYLDGLKAL----INPQTKRIHTSFNQTVTETGRLSSSEPNLQ----- 630
Query: 1898 VEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALI 1957
+I AE R F P + +L+ADYSQIELR+MAH S+D I
Sbjct: 631 --------NIPVRTAEGKKI----RSLFEPGEGYDYILSADYSQIELRIMAHMSEDKHFI 678
Query: 1958 GLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
+ D+ T AA+ D V S+ R + K + +GI+YG+ L++ L+ S E
Sbjct: 679 DAFCH-NQDIHTATAAQVFKVPIDEVTSELRGKAKAVNFGIIYGISAFGLAKNLHISPKE 737
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
A+E I ++ GV +++H V +Q G+V +L GR+R+L IK N +++ A+R A
Sbjct: 738 AREYIDNYLQECSGVKNFMHEIVEKAYQDGFVTTLFGRRRYLPAIKSSNFNQRALAERMA 797
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+N+ QG+AADIIKIAM I AN + R+LLQVHDELVLEV
Sbjct: 798 MNTPIQGTAADIIKIAMNRASEAIK----------EANL-----KSRILLQVHDELVLEV 842
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWG 2174
I++ ++ M++ A L VPL++ I G W
Sbjct: 843 VKEEIEKVSEILTTAMQNTASLKVPLIIDINYGKNWA 879
>gi|444915846|ref|ZP_21235971.1| DNA polymerase I [Cystobacter fuscus DSM 2262]
gi|444712840|gb|ELW53753.1| DNA polymerase I [Cystobacter fuscus DSM 2262]
Length = 891
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 174/563 (30%), Positives = 283/563 (50%), Gaps = 60/563 (10%)
Query: 1623 GGLNLVGTSLGLENVGSSFLLLSP--VHLKDGI-DMCIVSWILWPDDERSSNPNLEKEVK 1679
G L G G ++ + +LLL+ + L+ G D+ ++S++L D + LE +
Sbjct: 375 GVLEDEGVKKGGHDLKALWLLLAREGIQLRGGEEDVELLSYLL---DASRRDHTLEFLAR 431
Query: 1680 KRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLV---SEELIEALL 1736
+R+ + A + GR ++ + VA A+ + + + LV EEL L
Sbjct: 432 ERMQVDLPALPSTGGRKPRPLKEFSPG----EVAVAYAVRADVARRLVPGLQEELEPLGL 487
Query: 1737 N-----IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYT 1791
N +E+PLV +LA ME G+ VD+ + + + K+ + LAG +F++ +
Sbjct: 488 NRLAKELEVPLVPILARMEARGVKVDVATLRKISEKVGAECDAKVKEIHQLAGTEFNVGS 547
Query: 1792 AADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCT 1851
+A VLY L+LP+ +GK PSTD+ L+ L +H + I E+R+L+KL +
Sbjct: 548 NPQLAEVLYKKLELPV---LKRGKTGPSTDQEVLEKLAEKHALPRAIIEYRSLSKLKSTY 604
Query: 1852 LGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGN 1911
L ++ L T+ LH + Q +TATGRLS +PNLQ + E M
Sbjct: 605 LDTLPELV-----TKDGRLHTTFHQAATATGRLSSSDPNLQNIPIRTELGM--------- 650
Query: 1912 AEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMI 1971
R FI + E L++ADYSQIELRL+AH ++D L+ ++ D+ +
Sbjct: 651 --------EIRRAFI-ADEGHQLVSADYSQIELRLLAHIAEDEVLLDAFARDE-DIHSRT 700
Query: 1972 AARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPG 2031
AA G + V +R K + +GI YG+ P LS +LN EA++ I+ + + + G
Sbjct: 701 AAEVFGVPQKEVTKDQRRVAKMVNFGIAYGLSPYGLSTRLNIPEEEARDIIERYFTRYAG 760
Query: 2032 VASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIK 2091
+ +L V ++GYVE+L GR+R + + N + A+R A+N QG+AAD++K
Sbjct: 761 IKRYLDETVRVARERGYVETLFGRRRPMGDLSAKNRQVVQAAERAAINMPIQGTAADLMK 820
Query: 2092 IAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQK 2151
AM+ + D++LA K R R+LLQVHDEL+ E ++ L ++
Sbjct: 821 KAMLEV-----------DAALARE----KLRTRMLLQVHDELLFEAPDDEVEAVKELSRR 865
Query: 2152 CMESAALLLVPLLVKIQVGSTWG 2174
CM + L VPL V++ G+TW
Sbjct: 866 CMGAVMTLKVPLKVEVGAGNTWA 888
>gi|227355154|ref|ZP_03839565.1| DNA polymerase I [Proteus mirabilis ATCC 29906]
gi|227164941|gb|EEI49788.1| DNA polymerase I [Proteus mirabilis ATCC 29906]
Length = 949
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 237/437 (54%), Gaps = 39/437 (8%)
Query: 1737 NIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIA 1796
+IE+PLV VL+ ME G+ +D + + ++L +EK+ + LAG +F+L + +
Sbjct: 548 DIEMPLVPVLSRMERKGVLIDAQVLAMQSQEITQRLAEIEKETFALAGQEFNLSSPKQLQ 607
Query: 1797 NVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSIC 1856
+L+ L LPI + KG PST++ L+ L H H + +I EHR LAKL + +
Sbjct: 608 EILFEKLNLPIIKKTPKGA--PSTNEEVLEALAHSHELPRLILEHRGLAKLKSTYTDKLP 665
Query: 1857 SLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDH 1916
+ ++++ +H + Q TATGRLS +PNLQ + + NE+ G
Sbjct: 666 ----LMVNSKTKRVHTSYHQAVTATGRLSSRDPNLQNI------PVRNEE---GR----- 707
Query: 1917 CKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWT 1976
R FI ++ + ++AADYSQIELR+MAH S+D L+ ++ D+ A+
Sbjct: 708 ---RIRQAFI-VRDGFKIVAADYSQIELRIMAHLSQDKGLLDAFAQ-GKDIHRATASEVF 762
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G D V +++R K + +G++YGM LS+Q+ EA+ + + +PGV ++
Sbjct: 763 GIPLDEVTAEQRRSAKAINFGLIYGMSAFGLSQQIGVERKEAQRYMDLYFERYPGVLDYM 822
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
Q+GYVE+L GR+ +L +I N + ++R+A+N+ QG+AADIIK AMI
Sbjct: 823 ERTRKQASQQGYVETLDGRRLYLPEINSKNAIRRKASEREAINAPMQGTAADIIKKAMIA 882
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
+ + I PD +++QVHDELV EV S +++A +++ K MES+
Sbjct: 883 VDNWICHEC--PDD------------VHMIMQVHDELVFEVRESYLEKANAMIHKLMESS 928
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +PL V++ VG+ W
Sbjct: 929 MELAIPLKVEVGVGNNW 945
>gi|417767454|ref|ZP_12415394.1| DNA-directed DNA polymerase [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|400349960|gb|EJP02242.1| DNA-directed DNA polymerase [Leptospira interrogans serovar Bulgarica
str. Mallika]
Length = 917
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 277/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEV--KKR 1681
G N+ + LEN G +L+ + D + S++L P+ R + +L KE
Sbjct: 408 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEFLNYNT 460
Query: 1682 LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
++ E +G+ K ++ A+ + L+++ + + +E +L
Sbjct: 461 ITYEDLVG---TGKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 518 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGGPFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ +LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 578 ILFDNLKLRIVKKTQTGF---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 635 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 673
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 674 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHKRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPEIDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 792 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 852 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 897 MSLDLPIVVEGKFGVNW 913
>gi|402492609|ref|ZP_10839369.1| DNA polymerase I [Aquimarina agarilytica ZC1]
Length = 943
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 185/664 (27%), Positives = 299/664 (45%), Gaps = 105/664 (15%)
Query: 1517 YDKHSEANSGVLFEIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPE 1576
+D + + +L E+ G+A WE S +Y+ P+D +
Sbjct: 374 FDTETTSLDPLLAELVGIAFSWEKSHGFYLPFPED-----------------------QQ 410
Query: 1577 HQLEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLEN 1636
+I Q + E + K N+K I+VL V++Q
Sbjct: 411 EAQSLIAQLFP----FFENESITKIGQNLKYDIKVLDKYGVTVQ---------------- 450
Query: 1637 VGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGR- 1695
G F D I +++ PD N++ + L+ + G+
Sbjct: 451 -GPLF------------DTMIAHYLINPDMRH----NMDVLAETYLNYTPVSITELIGKK 493
Query: 1696 WKNQ--MRRAAHNGCCRRVAQ----TRALCSVLWKLLVSEELIEALLNIEIPLVNVLADM 1749
KNQ MR+ + + T L + L + +E NIE+PLV VL+ M
Sbjct: 494 GKNQLSMRQVPVDKQTEYAVEDADITLQLAAHFTPELKEAKTLELFNNIELPLVKVLSAM 553
Query: 1750 ELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPE 1809
E+ GI +D++ L + LE Y AG F++ + + VL+ +KL
Sbjct: 554 EIEGINLDIDFLNSLSEELNLDISKLEDSIYEQAGETFNIGSPKQLGVVLFEKMKLVDKP 613
Query: 1810 GHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT 1869
K Q+ ST + L L EH I+ I +R L KL + + ++ A+++ +T++
Sbjct: 614 KKTKTGQY-STAEDVLSSLAKEHQIIADILTYRGLTKLKSTYIDALP--AQVNPNTKR-- 668
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQ 1929
+H ++QT ATGRLS PNLQ + E R F+P
Sbjct: 669 VHTDYIQTVAATGRLSSNNPNLQNIPIRTERGRQ-----------------VRKAFVPRD 711
Query: 1930 ENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERD 1989
EN +L+AADYSQIELR++A S + A++ D+ AA+ + V ++R
Sbjct: 712 ENHVLVAADYSQIELRIIAALSNETAMMEAFQNGE-DIHATTAAKVFQVPLEEVSREQRS 770
Query: 1990 QTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYV 2049
K + +GI+YG+ LS Q N + E+KE I+++ ++P + +++ V G+V
Sbjct: 771 HAKTVNFGIMYGVSAFGLSNQTNLTRAESKELIEAYYKTYPKLKAYMSEQVDFARDNGFV 830
Query: 2050 ESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPD 2109
+++ GR+R+L I N + A+R AVN+ QGSAADIIKIAMINI++ + G Y
Sbjct: 831 QTVLGRRRYLKDINSANAIVRGAAERNAVNAPIQGSAADIIKIAMINIYNKLNEGNY--- 887
Query: 2110 SSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQV 2169
++LLQVHDELV +V + ++ L++ ME+A L VPL V++ V
Sbjct: 888 ------------HTKMLLQVHDELVFDVPKNELETISKLIKHEMENAFTLDVPLDVELGV 935
Query: 2170 GSTW 2173
G W
Sbjct: 936 GDNW 939
>gi|375089727|ref|ZP_09736052.1| DNA polymerase I [Facklamia languida CCUG 37842]
gi|374566574|gb|EHR37813.1| DNA polymerase I [Facklamia languida CCUG 37842]
Length = 887
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 232/449 (51%), Gaps = 42/449 (9%)
Query: 1730 ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSL 1789
E+ + +EIPL LA E+ G+ VD + LQ +L ++ + + +AG F+L
Sbjct: 480 EMTQLYDEMEIPLAKSLAQTEITGVKVDRQILEDKDRQLQVQLDRMQAEIHEMAGGDFNL 539
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
+ + VL+ L+LP+ + K K ST L+ L HPI+ I ++R LAKL +
Sbjct: 540 NSPKQLGEVLFERLELPVIK---KTKTGYSTAADVLEKLIDHHPIIQAILDYRQLAKLQS 596
Query: 1850 CTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG 1909
L + + + +H ++QT T TGRLS +PNLQ + +E
Sbjct: 597 TYLKGLPPFIK-----EDGKIHTRYVQTLTQTGRLSSTDPNLQNIPIRIE---------E 642
Query: 1910 GNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFT 1969
G R F+P+ E+W + ADYSQIELR++AH ++D +I + D+ +
Sbjct: 643 GRL--------IRQAFVPAHEDWQMFGADYSQIELRVLAHMAQDEHMIQAFIEGE-DIHS 693
Query: 1970 MIAARWTG-RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSS 2028
A R G +E+ V S+ R Q K + +GI+YG+ LS+ LN EAK+ I +
Sbjct: 694 TTARRVFGLAAEEPVSSEHRRQAKAVNFGIVYGISDYGLSQNLNIPRKEAKKFIDRYFEQ 753
Query: 2029 FPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAAD 2088
FP +A ++ V S GYV++L R+R+L I N +S A+R A+NS QG+AAD
Sbjct: 754 FPKIADYMEEIVQSARTHGYVQTLFNRRRYLPDIHASNFNVRSFAERTAMNSPIQGTAAD 813
Query: 2089 IIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSL 2148
IIKIAM+N++ A + + LK R++LQVHDEL+LE ++ L
Sbjct: 814 IIKIAMVNLNK-------------ALDQEELK--SRIILQVHDELILEGPRDEMERLEVL 858
Query: 2149 VQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
V + MESA L VPL V +G W L+
Sbjct: 859 VPQVMESACNLSVPLKVDYHIGDNWYDLK 887
>gi|410477712|ref|YP_006765349.1| DNA polymerase I [Leptospirillum ferriphilum ML-04]
gi|406772964|gb|AFS52389.1| DNA polymerase I [Leptospirillum ferriphilum ML-04]
Length = 872
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 235/468 (50%), Gaps = 45/468 (9%)
Query: 1711 RVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQK 1770
R R + S LW+ V E L+E + +IEIPL +L ME+ GI +D + AR ++
Sbjct: 449 RTRLVRNVLSKLWEDAVKEGLLELVQSIEIPLGRILYQMEVLGIRIDRQALESARESIEA 508
Query: 1771 KLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRH 1830
R LE++ Y LAG +F++ + + +LYG L LP KGK STD+ L L
Sbjct: 509 LARELEEEIYRLAGSRFTILSPKQVGEILYGKLGLPT---ARKGKTGYSTDEETLTGLSA 565
Query: 1831 EHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPN 1890
HP+ I +R + KLL+ + I + Q LHG + QT TATGRLS PN
Sbjct: 566 LHPLPEKILAYRQMKKLLSTYVDPISR----GVDAQG-RLHGQFNQTVTATGRLSSSNPN 620
Query: 1891 LQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHF 1950
LQ + E+ C I + EN +LL+ADYSQIELRL+AHF
Sbjct: 621 LQNIPMRSP----------AGREIRKCFI--------AGENRVLLSADYSQIELRLLAHF 662
Query: 1951 SKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQ 2010
S+DP L+ + + + D+ A G D V + R + K + +GILYGM +LS+
Sbjct: 663 SEDPELMAVFER-NEDIHARTARLLFG---DPVTPETRRKAKTINFGILYGMSAFSLSQD 718
Query: 2011 LNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEK 2070
L EA+ I + +FP V + + G V ++ GRKR + ++ + + +
Sbjct: 719 LGVEPQEAQAFIDRYFGAFPKVGPLFDSILEEAKKTGEVRTILGRKRRIPELFAPDRRSR 778
Query: 2071 SKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVH 2130
+R AVN++ QGSAAD+IK +M++ G + D + LL+QVH
Sbjct: 779 EYGERMAVNTVLQGSAADLIKKSMVDF------GQVRKDRPEVGD---------LLVQVH 823
Query: 2131 DELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEP 2178
DEL+ EV +++A ++ ME A L VPL+V++ G W P
Sbjct: 824 DELLFEVREDNLEDASGTIRSLMEGALRLKVPLIVQVGHGKNWVDAHP 871
>gi|398305966|ref|ZP_10509552.1| DNA polymerase I [Bacillus vallismortis DV1-F-3]
Length = 880
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 255/521 (48%), Gaps = 40/521 (7%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRRV 1712
D + ++I+ P + ++ K+ L S + + + R+
Sbjct: 396 FDALLAAYIINPANSYDDVASVAKDYGLHLVSSDESVYGKGAKRAVPPENELSEHLVRKA 455
Query: 1713 AQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKL 1772
+AL L + L + + +E ++E+PL +L +ME G+ VD++ + L KL
Sbjct: 456 LAIQALREKLVQELENNDQLELFEDLEMPLALILGEMESTGVKVDVDRLKRMGEELGAKL 515
Query: 1773 RYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEH 1832
+ E+K + +AG F++ + + +L+ + LP+ + K K ST L+ L +H
Sbjct: 516 KEYEEKIHEIAGEPFNINSPKQLGVILFEKIGLPVVK---KTKTGYSTSADVLEKLADKH 572
Query: 1833 PIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQ 1892
IV I ++R + KL + + + + R + +H + Q T TGRLS +PNLQ
Sbjct: 573 DIVDYILQYRQIGKLQSTYIEGLLKVTR----QDSHKVHTRFNQALTQTGRLSSTDPNLQ 628
Query: 1893 CVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSK 1952
+ +E + KI R F+PS+ +W++ AADYSQIELR++AH SK
Sbjct: 629 NIPIRLE---------------EGRKI--RQAFVPSENDWLIFAADYSQIELRVLAHISK 671
Query: 1953 DPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLN 2012
D LI + D+ T A +ED V S R Q K + +GI+YG+ LS+ L
Sbjct: 672 DENLIEAFTNDM-DIHTKTAMDVFHVAEDEVTSAMRRQAKAVNFGIVYGISDYGLSQNLG 730
Query: 2013 CSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSK 2072
+ EA I + SF GV +++ +V QKGYV +L R+R++ ++ N +S
Sbjct: 731 ITRKEAGAFIDRYLESFQGVKAYMEDSVQDAKQKGYVTTLMHRRRYIPELTSRNFNIRSF 790
Query: 2073 AQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDE 2132
A+R A+N+ QGSAADIIK AMI+ +AA + + + RLLLQVHDE
Sbjct: 791 AERTAMNTPIQGSAADIIKKAMID---------------MAAKLKEKQLKARLLLQVHDE 835
Query: 2133 LVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L+ E I+ LV + ME A L VPL V G +W
Sbjct: 836 LIFEAPQEEIEILEKLVPEVMEHALALDVPLKVDFSSGPSW 876
>gi|71730794|gb|EAO32867.1| DNA-directed DNA polymerase, partial [Xylella fastidiosa subsp.
sandyi Ann-1]
Length = 462
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 227/459 (49%), Gaps = 40/459 (8%)
Query: 1716 RALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYL 1775
R C + KLL L IE+PLV VL +E G+ +D E + L +++
Sbjct: 39 RLHCVLAPKLLAEPILERVYREIEMPLVAVLERIEANGVQIDAEELYKQSADLSRRMVIA 98
Query: 1776 EKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIV 1835
++KA LAG F+L + + +L+ LKLP+ KG+ PST++ L+ + +H +
Sbjct: 99 QQKAMDLAGRHFNLDSPKQLQVLLFDELKLPVVVKTPKGQ--PSTNEEALEAIVDQHALP 156
Query: 1836 PVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
VI E+R+LAKL N + + + +H ++ Q ATGRLS +PNLQ +
Sbjct: 157 RVILEYRSLAKLRNTYTEKLPEM----IHPHTGRVHTNYHQAGAATGRLSSSDPNLQNIP 212
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
D + R F PS L+A DYSQIELR+MAH S D
Sbjct: 213 ----------------IRTDDGRRIRRAFVAPSGRK--LIACDYSQIELRIMAHLSGDAG 254
Query: 1956 LIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSS 2015
L+ DV IAA GR D V ER K + +G++YGM L+ QL S
Sbjct: 255 LVDAFESG-VDVHCAIAAEVFGRGIDEVTPNERRAAKAINFGLIYGMSAFGLARQLGISR 313
Query: 2016 NEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQR 2075
EA++ I + F GV ++ +GYVE++ GR+ +L+ I GN +++ A+R
Sbjct: 314 GEAQDYIALYFDRFSGVRDFMENTRQQARDRGYVETVFGRRLYLNSIASGNQTQRAGAER 373
Query: 2076 QAVNSICQGSAADIIKIAMINIHSII-VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELV 2134
A+N+ QG+AADIIK AM+ + + VGG + R ++LQVHDELV
Sbjct: 374 AAINAPMQGTAADIIKRAMVAVDGWLGVGG--------------HRERALMILQVHDELV 419
Query: 2135 LEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
E D + V V M +AA L VPL+V + VG W
Sbjct: 420 FEADEGFVPTLVHEVSARMAAAAQLRVPLVVDVGVGHHW 458
>gi|320103460|ref|YP_004179051.1| DNA polymerase I [Isosphaera pallida ATCC 43644]
gi|319750742|gb|ADV62502.1| DNA polymerase I [Isosphaera pallida ATCC 43644]
Length = 1040
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 151/464 (32%), Positives = 239/464 (51%), Gaps = 41/464 (8%)
Query: 1718 LCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEK 1777
L VL + + +E L +E PL+ +LADME G+ +D Q +L LE+
Sbjct: 616 LGQVLAQRVAAEGLERLYDTLERPLIEILADMEEAGVALDRARLRQLSRDFSARLTDLER 675
Query: 1778 KAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPV 1837
+A+ LAG F+L + + +L+ L LP P G K ST + L+ L H + V
Sbjct: 676 QAHQLAGEPFNLSSPPQLRVILFERLGLP-PRGKTP-KGEASTAQEVLEELAALHQLPKV 733
Query: 1838 IKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE-H 1896
+ EHR + KL N L ++ +L + + + Q TATGRLS EPNLQ +
Sbjct: 734 LLEHRRIEKLKNTYLDALPNL-----THPDGRIRATFNQGVTATGRLSSSEPNLQNIPVR 788
Query: 1897 MVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPAL 1956
E + + G+ P+++ +LL ADYSQIELR++AHFS+DPAL
Sbjct: 789 TEEGRQVRQAFVAGD---------------PARQ--VLLTADYSQIELRVLAHFSRDPAL 831
Query: 1957 IGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSN 2016
+ + D+ +AA+ G + DSV S +R K + +G++YG+ + L+ +L S +
Sbjct: 832 LRAFEEDR-DIHADVAAKIFGVALDSVTSDQRRMAKTVNFGVIYGLSAHGLASRLGISQS 890
Query: 2017 EAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQ 2076
EA I ++ +P V +++ ++ G VE+L+GR+R ++ IK + ++ A+R
Sbjct: 891 EAAAFINAYFDQYPHVEAFMTRVLTQARDTGRVETLEGRRRAINGIKHVEGRHRNLAERT 950
Query: 2077 AVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLE 2136
A+N++ QGSAAD+IK AMI + + K R++LQ+HDEL+ E
Sbjct: 951 AINTVIQGSAADLIKRAMIAVDQ---------------RLKETKLPARMILQIHDELLFE 995
Query: 2137 VDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLEPFQ 2180
V+ + E LVQ+ M AA L PL V + G W +EP +
Sbjct: 996 VERDALTETARLVQEAMIHAATLETPLKVDLAAGPNWLDVEPLE 1039
>gi|261408692|ref|YP_003244933.1| DNA polymerase I [Paenibacillus sp. Y412MC10]
gi|261285155|gb|ACX67126.1| DNA polymerase I [Paenibacillus sp. Y412MC10]
Length = 886
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 237/466 (50%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ L + K L + E++ ++E+PL +LADME GI V+ E +
Sbjct: 457 MARKCLAVSELVPIQEKELAANEMLPLFHDLEMPLSRILADMEKQGIAVNAEDLKELGRE 516
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+ ++ L ++ Y +AG +F+L + + +L+ L+LP+ + K K STD L+
Sbjct: 517 FEGQIAKLVQEIYEIAGTEFNLNSPKQLGEILFVKLELPVIK---KTKTGYSTDAEVLEK 573
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV +I ++RTLAKL + + + L IS T K +H ++ QT ATGRLS +
Sbjct: 574 LAPYHDIVRLILQYRTLAKLQSTYVEGL--LKEISSVTGK--VHTYYRQTIAATGRLSSQ 629
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
PNLQ + +E + K+ R F+PS+ W +LAADYSQIELR++
Sbjct: 630 YPNLQNIPIRLE---------------EGRKL--RKVFVPSEPGWSILAADYSQIELRVL 672
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D L D+ T A G D V S R K + +GI+YG+ L
Sbjct: 673 AHISDDERLKEAFVHDM-DIHTKTAMDVFGVGMDEVDSNMRRSAKAVNFGIVYGISDYGL 731
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S+ LN + EA I + F GV ++ V V Q GYV++L R+R+L +I N
Sbjct: 732 SQNLNITRKEAAAFIDQYFEVFQGVRRYMDVIVKQAKQDGYVKTLLERRRYLPEINASNF 791
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK+AM+++ D +L + + R+LL
Sbjct: 792 NLRSFAERTAMNTPIQGTAADIIKLAMVHM-----------DKALHER----QLKSRMLL 836
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDELV EV ++ LV M A L VPL ++ G W
Sbjct: 837 QVHDELVFEVPEDELEVMKELVPDVMSQALKLSVPLKSEVSYGENW 882
>gi|116492456|ref|YP_804191.1| DNA polymerase I [Pediococcus pentosaceus ATCC 25745]
gi|116102606|gb|ABJ67749.1| DNA polymerase I [Pediococcus pentosaceus ATCC 25745]
Length = 887
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 268/545 (49%), Gaps = 48/545 (8%)
Query: 1630 TSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
T +GL +G + L+ V+ D+ + S++L +D + L E
Sbjct: 386 TYVGLHRLG---IKLTAVNF----DILLQSYLLDTNDNSNDLGQLAHEHDYDAIDTDDDV 438
Query: 1690 ANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADM 1749
+ + + N R++A L L + LV E +IE+PL VLA M
Sbjct: 439 YGKGAKRAVPEQTELFNHLARKLAAINFLGKQLDQELVKNEQNNLYWDIELPLAIVLAKM 498
Query: 1750 ELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPE 1809
E+ GI VD Q ++ ++L +E Y AG +F+L + + VL+ LKLPI +
Sbjct: 499 EISGIKVDRNRLNQMQSEFTERLSEIETNIYNEAGEEFNLNSPKQLGVVLFEKLKLPIIK 558
Query: 1810 GHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT 1869
K K ST L+ L+ E PI+ I +RTL+K+ + + + + + T
Sbjct: 559 ---KTKTGYSTAVDVLEKLQGESPIIDNILNYRTLSKIKSTYVDGLLKV----IHTTDEK 611
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQ 1929
+H ++QT T TGRLS +PNLQ + +E + KI R F+P++
Sbjct: 612 VHTTYVQTLTQTGRLSSIDPNLQNIPVRIE---------------EGRKI--RQAFVPAR 654
Query: 1930 ENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS-VGSQER 1988
E W +L++DYSQIELR++AH + D L K D+ A + G + S V R
Sbjct: 655 EGWHILSSDYSQIELRVLAHITGDQNLQEAF-KNGEDIHATTAVKIFGLKDASEVTPNIR 713
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K + +GI+YG+ LS+ + S +AK+ I+++ FPGV ++ +V ++GY
Sbjct: 714 RQAKAVNFGIVYGISDYGLSQNIGISRKDAKKFIETYFKEFPGVKKYIDESVQLAKEQGY 773
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
VE++ R+R+L I + +S A+R A+N+ QGSAADIIKIAMI++ +
Sbjct: 774 VETIAHRRRYLPDINSSSFNLRSFAERTAMNTPIQGSAADIIKIAMIDMEN--------- 824
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
+ + R+LLQVHDEL+ EV + LV K M+SA L VPL V
Sbjct: 825 ------ELEKRNLKSRMLLQVHDELIFEVPDEEMTLMKELVPKVMDSAVKLDVPLKVGAA 878
Query: 2169 VGSTW 2173
G+TW
Sbjct: 879 WGNTW 883
>gi|406997586|gb|EKE15616.1| hypothetical protein ACD_11C00116G0003 [uncultured bacterium]
Length = 900
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 147/442 (33%), Positives = 232/442 (52%), Gaps = 46/442 (10%)
Query: 1738 IEIPLVNVLADMELWGIGVD---MEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAAD 1794
IE+PL+ LA MEL+GI ++ +G + + KL+ LEK Y LAG +F++ +
Sbjct: 502 IEMPLIETLAKMELFGIKLNPIIFKGIAEK---ISVKLKNLEKSIYELAGTQFNINSPGQ 558
Query: 1795 IANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGS 1854
++++L+ LKLP K K ST L+ LR +H I+ I+E+R L KL L +
Sbjct: 559 LSDILFSVLKLP-TNLIKKTKTKYSTASSELEKLRDQHKIIEKIEEYRELFKLKTTYLDT 617
Query: 1855 ICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEV 1914
I L + + +H + Q TATGRLS EPNLQ + +
Sbjct: 618 IPLL-----TDENSRIHTTFNQAITATGRLSSTEPNLQNIP----------------IKT 656
Query: 1915 DHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAAR 1974
D K+ F ++E+++L++ADYSQI+LR +AH S+D LI + D+ + A+
Sbjct: 657 DLGKMLRTAF--EAEEDFVLVSADYSQIDLRAIAHVSEDKKLIEAFHRGE-DIHKITASE 713
Query: 1975 WTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVAS 2034
S V + R K L +G++YG+G S+ S EA++ I ++ F GVA+
Sbjct: 714 VNKVSLSQVSDKMRSAAKALNFGVIYGIGAYGFSQSAGISREEAQQFINTYMEKFSGVAA 773
Query: 2035 WLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAM 2094
++ + GYVE++ GR+R+L +I N + +S A+R A+N QG AADI+K+AM
Sbjct: 774 YMQATRKLVKENGYVETILGRRRYLPEINSPNFQAQSGAERMAINMPIQGLAADIVKLAM 833
Query: 2095 INIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCME 2154
I + LA + G+ R +LQ+HDE++ EV + +E +K ME
Sbjct: 834 IKLE------------PLAEKYS---GKARAILQIHDEIIFEVREEIAQEFSQQAKKIME 878
Query: 2155 SAALLLVPLLVKIQVGSTWGSL 2176
+ L VPL+V +++G WG L
Sbjct: 879 NVLTLKVPLVVDVKIGENWGEL 900
>gi|313889726|ref|ZP_07823368.1| DNA-directed DNA polymerase [Streptococcus pseudoporcinus SPIN 20026]
gi|416851899|ref|ZP_11909044.1| DNA-directed DNA polymerase [Streptococcus pseudoporcinus LQ 940-04]
gi|313121771|gb|EFR44868.1| DNA-directed DNA polymerase [Streptococcus pseudoporcinus SPIN 20026]
gi|356739388|gb|EHI64620.1| DNA-directed DNA polymerase [Streptococcus pseudoporcinus LQ 940-04]
Length = 881
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 160/471 (33%), Positives = 236/471 (50%), Gaps = 48/471 (10%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVD----MEGCLQ 1763
R+VA V+ + L + IE+PL NVLA ME+ GI V+ ME Q
Sbjct: 450 LARKVAVLATSKPVMLEKLAENGQSDLYYKIELPLANVLAKMEIAGIKVNKLTLMEMAEQ 509
Query: 1764 ARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKH 1823
RN++ L ++ Y LAG +F++ + + ++L+ ++LP+ K K ST
Sbjct: 510 NRNIIDA----LTQEIYDLAGEEFNINSPKQLGSILFEKMQLPLTMT-KKTKTGYSTAVD 564
Query: 1824 CLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGR 1883
L+ L PIV I ++R + KL + L L M K +H ++Q T TGR
Sbjct: 565 VLERLAPIAPIVAKILDYRQITKLQSTYL---IGLQDYIMEDGK--IHTRYVQDLTQTGR 619
Query: 1884 LSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIE 1943
LS +PNLQ + +E ++ R F PS ++W+LL++DYSQIE
Sbjct: 620 LSSTDPNLQNIPIRME----------------QGRL-IRKAFTPSSDDWLLLSSDYSQIE 662
Query: 1944 LRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG-RSEDSVGSQERDQTKRLIYGILYGM 2002
LR++AH S D LI + + D+ T A R G E V + +R K + +GI+YG+
Sbjct: 663 LRVLAHISGDEHLIAAFND-NADIHTATAMRVFGIEKEADVTANDRRNAKAVNFGIVYGI 721
Query: 2003 GPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKI 2062
LS L S +A++ I ++ +PG+ ++ V KGYVE+L R+R L I
Sbjct: 722 SDFGLSNNLGISRQKARDYIDTYFERYPGIKKYMDAVVREAKDKGYVETLFKRRRELPDI 781
Query: 2063 KFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGR 2122
N +S A+R A+NS QGSAADI+KIAMIN+ +V G +K
Sbjct: 782 NSRNFNVRSFAERTAINSPIQGSAADILKIAMINLDKALVDGEFK--------------- 826
Query: 2123 CRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++LLQVHDE+VLEV + LV++ ME A L VPL G +W
Sbjct: 827 AKMLLQVHDEIVLEVPKQELAAVRQLVKEIMEDAVDLAVPLRADENSGQSW 877
>gi|124026294|ref|YP_001015410.1| DNA polymerase I [Prochlorococcus marinus str. NATL1A]
gi|123961362|gb|ABM76145.1| DNA polymerase I [Prochlorococcus marinus str. NATL1A]
Length = 986
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 246/492 (50%), Gaps = 61/492 (12%)
Query: 1702 RAAHNGCCRRVAQTRALCSVLWKLL--VSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
++A C V TR L + L S +LI L +E PL VLA++E GI +D
Sbjct: 532 KSASMYCGMDVYLTRKLAIIYINRLKETSIKLINLLKEVEQPLEQVLAEIESTGIIIDTP 591
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPS 1819
L K+L +EK+ Y +AG +F+L + + +L+ L L + K K S
Sbjct: 592 YLKDLSLELTKRLNTIEKEVYNIAGSEFNLSSPKQLGELLFEKLDLDRKKSR-KTKTGWS 650
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTST 1879
TD L+ L +HPIV +I EHRT++KLLN + ++ L + + +H + Q T
Sbjct: 651 TDVAVLEKLESDHPIVKIIIEHRTISKLLNTYVDALPKL----IEKETGRVHTDFNQAVT 706
Query: 1880 ATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADY 1939
ATGRLS PNLQ + EF R F+P Q++W LL+ADY
Sbjct: 707 ATGRLSSSNPNLQNIPVRTEFSR-----------------RIRKAFLP-QKDWKLLSADY 748
Query: 1940 SQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGIL 1999
SQIELR++ H S + L K + DV ++ A + D++ + ER K + +G++
Sbjct: 749 SQIELRILTHLSGEEVLKNAYLK-NEDVHSLTAKILFEK--DAIDADERRIGKTINFGVI 805
Query: 2000 YGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFL 2059
YGMG + S EAK + FK +P V +L +G+VE+L GR+R+
Sbjct: 806 YGMGAQRFARSTGVSLIEAKYFLSKFKERYPAVFKFLEYQERLALSQGFVETLLGRRRYF 865
Query: 2060 SKIKFG---------NNKEKSKAQRQ---------AVNSICQGSAADIIKIAMINIHSII 2101
K G N + + A+R A N+ QGS+ADIIK+AMI +HS +
Sbjct: 866 HFNKNGLGRLLGTPPNEIDLTTARRAGMEAQQLRAAANAPIQGSSADIIKLAMIQLHSAL 925
Query: 2102 VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLV 2161
++ LAA ++LLQVHDELVLEV+P ++E LVQ ME+A L V
Sbjct: 926 ------RETGLAA---------KILLQVHDELVLEVNPKDLEETKLLVQNTMENAVKLSV 970
Query: 2162 PLLVKIQVGSTW 2173
PL+V+ VG W
Sbjct: 971 PLIVETGVGVNW 982
>gi|421109418|ref|ZP_15569938.1| DNA-directed DNA polymerase [Leptospira kirschneri str. H2]
gi|410005462|gb|EKO59253.1| DNA-directed DNA polymerase [Leptospira kirschneri str. H2]
Length = 917
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 277/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEV--KKR 1681
G N+ + LEN G +L+ + D + S++L P+ R + +L KE
Sbjct: 408 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEFLNYNT 460
Query: 1682 LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
++ + A G+ K ++ A+ + L+++ + + +E +L
Sbjct: 461 ITYDDLVGA---GKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 518 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGGPFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ +LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 578 ILFDNLKLRIVKKTQTGF---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 635 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 673
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 674 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHKRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPEIDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 792 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 852 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 897 MSLDLPIVVEGKFGVNW 913
>gi|330831571|ref|YP_004394523.1| DNA polymerase I [Aeromonas veronii B565]
gi|423211776|ref|ZP_17198309.1| DNA polymerase I [Aeromonas veronii AER397]
gi|328806707|gb|AEB51906.1| DNA polymerase I [Aeromonas veronii B565]
gi|404612997|gb|EKB10041.1| DNA polymerase I [Aeromonas veronii AER397]
Length = 921
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 263/527 (49%), Gaps = 49/527 (9%)
Query: 1654 DMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR------RAAHNG 1707
D + S++L + +S +++ K+ L E + + +G+ Q+ A
Sbjct: 433 DTMLESYVL---NSTASRHDMDSLAKRYLGVETTSFEDIAGKGVKQLTFNQIELEQAAPY 489
Query: 1708 CCRRVAQTRALCSVLW-KLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
T L LW +L L + IE+PL+ VLA MEL G +D + Q
Sbjct: 490 AAEDADITLRLHQTLWGQLEAVPGLAKVFSEIELPLLPVLARMELLGTTIDPKLLHQQSQ 549
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
++ +L LEK+A+ LAG +F+L + + +L+ L LPI + KG PST + L
Sbjct: 550 EIELRLAELEKQAHELAGQEFNLSSPKQLGEILFTKLGLPIIKKTPKGA--PSTAEEVLA 607
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L + + ++ EHR LAKL + + + + Q +H + Q ATGRLS
Sbjct: 608 ELAETYELPQLLMEHRGLAKLKSTYTDKLP----LMIKPQTGRVHTSYHQAVAATGRLSS 663
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + + NE G R FIPS + L+AADYSQIELR+
Sbjct: 664 SDPNLQNI------PVRNEQ---GR--------RIRQAFIPSA-GYKLVAADYSQIELRI 705
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
MAH S D L+ ++ D+ AA G + D+V + R K + +G++YGM
Sbjct: 706 MAHLSGDKGLLTAFAEGK-DIHKATAAEVFGVAIDAVTTDMRRSAKAINFGLIYGMSAFG 764
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
L++QL EA++ + + +PGV ++ +GYVE+L GR+ +L IK N
Sbjct: 765 LAKQLGIGRAEAQKYMDLYFERYPGVLEYMERTRQQAEAQGYVETLFGRRLYLPDIKSRN 824
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
+ A+R A+N+ QG+AADIIK AMIN+ S I G D S+ R+L
Sbjct: 825 AGLRKAAERAAINAPMQGTAADIIKRAMINVDSWIRG---IEDESI-----------RML 870
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+QVHDELV E+ ++E ++++++ M +AA L VPL+V+ G W
Sbjct: 871 MQVHDELVFEIREEKLEEYIAIIKEKMSAAAELDVPLVVEAGTGDNW 917
>gi|450007895|ref|ZP_21827949.1| DNA polymerase I [Streptococcus mutans NMT4863]
gi|449185919|gb|EMB87782.1| DNA polymerase I [Streptococcus mutans NMT4863]
Length = 878
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 242/483 (50%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEE----------LIEALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE ++ L ++E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPMRQKLSANDQLDLLFDMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|329929159|ref|ZP_08282945.1| DNA-directed DNA polymerase [Paenibacillus sp. HGF5]
gi|328936836|gb|EGG33271.1| DNA-directed DNA polymerase [Paenibacillus sp. HGF5]
Length = 886
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 237/466 (50%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ L + K L + E++ ++E+PL +LADME GI V+ E +
Sbjct: 457 MARKCLAVSELVPIQEKELAANEMLPLFHDLEMPLSRILADMEKQGIAVNAEDLKELGRE 516
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+ ++ L ++ Y +AG +F+L + + +L+ L+LP+ + K K STD L+
Sbjct: 517 FEGQIAKLVQEIYEIAGTEFNLNSPKQLGEILFVKLELPVIK---KTKTGYSTDAEVLEK 573
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV +I ++RTLAKL + + + L IS T K +H ++ QT ATGRLS +
Sbjct: 574 LAPYHDIVRLILQYRTLAKLQSTYVEGL--LKEISSVTGK--VHTYYRQTIAATGRLSSQ 629
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
PNLQ + +E + K+ R F+PS+ W +LAADYSQIELR++
Sbjct: 630 YPNLQNIPIRLE---------------EGRKL--RKVFVPSEPGWSILAADYSQIELRVL 672
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S D L D+ T A G D V S R K + +GI+YG+ L
Sbjct: 673 AHISDDERLKEAFVHDM-DIHTKTAMDVFGVGMDEVDSNMRRSAKAVNFGIVYGISDYGL 731
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
S+ LN + EA I + F GV ++ V V Q GYV++L R+R+L +I N
Sbjct: 732 SQNLNITRKEAAAFIDQYFEVFQGVRRYMDVIVKQAKQDGYVKTLLERRRYLPEINASNF 791
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+S A+R A+N+ QG+AADIIK+AM+++ D +L + + R+LL
Sbjct: 792 NLRSFAERTAMNTPIQGTAADIIKLAMVHM-----------DKALHER----QLKSRMLL 836
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
QVHDELV EV ++ LV M A L VPL ++ G W
Sbjct: 837 QVHDELVFEVPEDELEVMKELVPDVMSQALKLSVPLKSEVSYGENW 882
>gi|295132395|ref|YP_003583071.1| DNA polymerase I [Zunongwangia profunda SM-A87]
gi|294980410|gb|ADF50875.1| DNA polymerase I [Zunongwangia profunda SM-A87]
Length = 941
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 189/649 (29%), Positives = 297/649 (45%), Gaps = 101/649 (15%)
Query: 1530 EIHGLAVCWENSPVYYVNLPKDLWSDHRRKDRFLIYGSSDKNVLTPEHQLEMIKQRWKRI 1589
++ G+A WE YY LP + D+ K + LI +L P
Sbjct: 385 QLVGIAFSWEGGKGYY--LP---FEDNIEKTQQLI------ELLRP-------------- 419
Query: 1590 GEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHL 1649
E ++ K N+K I+VL + ++ G +F
Sbjct: 420 --FFESPEIEKIGQNLKYDIKVLDKYGIKVE-----------------GPTF-------- 452
Query: 1650 KDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCC 1709
D I +++ PD R + L + + + G+ + MR
Sbjct: 453 ----DTMIAHYLINPD-MRHNMDILAETYLNYTPQPISELIGKKGKNQKSMRDVPLAEQT 507
Query: 1710 RRVAQTRALCSVLWKLLVSEELIEA----LLN-IEIPLVNVLADMELWGIGVDMEGCLQA 1764
A+ A + K +EL EA L N IE+PLV VLADME+ GI +D++ +
Sbjct: 508 EYAAED-ADITFQLKEFFEKELDEAKTRKLFNEIEMPLVEVLADMEIEGINLDLDFLKKL 566
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHC 1824
L + ++ LE K Y AG +F + + + +L+ L L K Q+ ST +
Sbjct: 567 SEALDRDIKELEAKIYEAAGEEFKISSPKQLGIILFEKLALVKKPKKTKTGQY-STSEDV 625
Query: 1825 LDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRL 1884
L L EH IV + ++R L KL N + ++ ++ S+ + +H ++QT ATGRL
Sbjct: 626 LSYLAPEHEIVQHVLDYRGLVKLQNTYVDALP--GQVEKSSGR--VHTDYVQTIAATGRL 681
Query: 1885 SMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIEL 1944
S PNLQ + E R FIP ++++LLAADYSQIEL
Sbjct: 682 SSNNPNLQNIPIRTERGRQ-----------------VRKAFIPRSDDYVLLAADYSQIEL 724
Query: 1945 RLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGP 2004
R++A S++ +I K D+ A++ + V ++R K + +GI+YG+
Sbjct: 725 RIIAALSEEETMIKAF-KDGEDIHASTASQVFNVPLEEVTREQRSNAKTVNFGIIYGVSA 783
Query: 2005 NTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKF 2064
LS Q + S +E+KE I ++ ++P +++++ V+ + GYV ++ GR+R+L I
Sbjct: 784 FGLSNQTSLSRSESKELIDTYYKTYPKLSNYIADQVAYAREHGYVSTILGRRRYLKDINS 843
Query: 2065 GNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCR 2124
N + A+R AVN+ QGSAADIIKIAMINIH L K + +
Sbjct: 844 QNAVVRGAAERNAVNAPIQGSAADIIKIAMINIH-----------KKLGEE----KLQTK 888
Query: 2125 LLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
+LLQVHDELV +V + + L++ ME+A L VPL V + VG W
Sbjct: 889 MLLQVHDELVFDVYKPELDQVKKLIKSEMENAYQLNVPLDVDLGVGQDW 937
>gi|424865266|ref|ZP_18289135.1| DNA-directed DNA polymerase [SAR86 cluster bacterium SAR86B]
gi|400758872|gb|EJP73072.1| DNA-directed DNA polymerase [SAR86 cluster bacterium SAR86B]
Length = 891
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 178/602 (29%), Positives = 291/602 (48%), Gaps = 82/602 (13%)
Query: 1579 LEMIKQRWKRIGEIMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVG 1638
LE++K +G+++E+ + N+K I VLK + I F
Sbjct: 361 LEIVKDE---LGKVIEENQSKIVGQNLKFDIPVLKRHGIKITDFKA-------------- 403
Query: 1639 SSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKN 1698
D ++S++ D ++ +L++ + L + +G
Sbjct: 404 ---------------DTMLMSYVY---DSTATRHSLDRLAEFYLGETTIKYTDVTGTASK 445
Query: 1699 QMR--RAAHNGCCRRVAQ----TRALCSVLWKLLVSEELIEALL-NIEIPLVNVLADMEL 1751
Q+ + C A+ T L L LL S++ ++ LL ++E PL VL+ +E
Sbjct: 446 QISFDKVELAIACEYAAEDADITLRLFYHLDNLLDSKKELKHLLESLEYPLARVLSRIES 505
Query: 1752 WGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGH 1811
G VD + L KK+ L K+AY ++G +F+L + + +LY LPI +
Sbjct: 506 NGAKVDKKQLTDYSKELGKKIDVLSKQAYKISGREFNLDSPKQLLEILYEEQGLPILKKT 565
Query: 1812 NKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLH 1871
KG+ PST++ L L E+ + VI E+R+LAKL + S+ +L + + +H
Sbjct: 566 PKGQ--PSTNEETLKRLAEEYELPKVILEYRSLAKLKSTYTDSLVALE----NPKSLRIH 619
Query: 1872 GHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQEN 1931
+ Q T+TGRLS EPNLQ + + KI R+ F+P Q N
Sbjct: 620 TSYHQAITSTGRLSSTEPNLQNIPIKT---------------AEGRKI--REAFVPEQGN 662
Query: 1932 WILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQT 1991
L+AADYSQIELR+MAH SKD L+ + + DV + AA G V +R
Sbjct: 663 -TLIAADYSQIELRIMAHLSKDKNLLNAFTN-NIDVHSSTAAEVFGVDLKEVSIDQRRSA 720
Query: 1992 KRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVES 2051
K + +G++YGM L+ QL+ S EA++ + ++ + GV +++ S QK YVE+
Sbjct: 721 KAINFGLMYGMTAFGLTRQLDISRAEAQQYLDTYFERYTGVKTYMENIRQSAKQKEYVET 780
Query: 2052 LKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSS 2111
+ GR+ ++ +I GN + A+R A+N+ QGSAADIIK AMI++ I + P+
Sbjct: 781 IMGRRLYVKEINSGNGLRRQAAERAAINAPLQGSAADIIKKAMIDVDLFIKDEM--PE-- 836
Query: 2112 LAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGS 2171
++++QVHDEL+ EV + K+A+ ++ ME+A + VPL+V+ Q
Sbjct: 837 -----------LKMIMQVHDELIFEVSKDLEKDAIKAIKTHMENAVSIDVPLIVEAQAAG 885
Query: 2172 TW 2173
W
Sbjct: 886 NW 887
>gi|402818281|ref|ZP_10867865.1| DNA polymerase I [Paenibacillus alvei DSM 29]
gi|402504028|gb|EJW14559.1| DNA polymerase I [Paenibacillus alvei DSM 29]
Length = 852
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 251/522 (48%), Gaps = 40/522 (7%)
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNGCCRR 1711
D + S++L PDD + ++ + + ++K R+
Sbjct: 367 AFDAQLASYVLNPDDATLTLQATAEKYGLAATPTDDDVYGKGAKFKVPALETVALHAARK 426
Query: 1712 VAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
R L V+ K+L +E+ +E+PL VLA ME GI VD + ++
Sbjct: 427 GKLVRQLKPVMEKMLEEQEMNRLYFELELPLSRVLAQMEKTGIQVDTDALNSLGAQFTEQ 486
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
+ K+ Y LAG F++ + + +L+ L LP+ + K K STD L+ L
Sbjct: 487 IETTMKRIYELAGTAFNVGSPKQLGEILFDKLGLPVIK---KTKTGYSTDAEVLEKLEPY 543
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
H I+P+I +R + KL + + + R + +H ++ QT TATGRLS + PNL
Sbjct: 544 HEIIPLILHYRQMTKLQSTYIEGLLKEVR----KETGNVHTYFRQTITATGRLSSQYPNL 599
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + +E + KI R F+PS++ W ++AADYSQIELR++AH S
Sbjct: 600 QNIPVRLE---------------EGRKI--RQAFVPSEKGWHIVAADYSQIELRVLAHIS 642
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
D L D+ T A G S + V + R K + +GI+YG+ LS+ L
Sbjct: 643 GDAKLKEAFVHDM-DIHTKTAMDVFGVSSEQVDANMRRSAKAVNFGIVYGISDYGLSQNL 701
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
N + EA + I+ + + F GV ++ V Q GYV+++ R+R+L I N +S
Sbjct: 702 NITRKEAGQFIEQYFAVFQGVKQYMEDIVKLARQDGYVKTMLERRRYLKDIHASNFNLRS 761
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R A+N+ QG+AADIIK+AM+ + + ++ L + R+LLQVHD
Sbjct: 762 FAERTAMNTPIQGTAADIIKLAMVQMD------IRMREAGL---------KSRMLLQVHD 806
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
ELV EV ++ + LV + MESA L VPL + G W
Sbjct: 807 ELVFEVPDEEMETMLKLVPEVMESAISLDVPLRADVNSGENW 848
>gi|422699767|ref|ZP_16757628.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1342]
gi|315171781|gb|EFU15798.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1342]
Length = 882
Score = 228 bits (580), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 44/468 (9%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R++ + L S L L + + +E+PL +L DME+ GI VD + +
Sbjct: 453 LARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVE 512
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
++L+ +E+K Y AG +F+L + + +L+ + LP+ + K K ST L+
Sbjct: 513 FSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIK---KTKTGYSTAVDVLEQ 569
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ + PIV I +R +AK+ + + L ++ K +H ++QT T TGRLS
Sbjct: 570 LKEQAPIVADILTYRQIAKIQST---YVEGLLKVIQPDNK--IHTRYVQTLTQTGRLSSV 624
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
+PNLQ + +E + KI R+ F+P ++NW++ ++DYSQIELR++
Sbjct: 625 DPNLQNIPIRLE---------------EGRKI--REAFVPREDNWLIFSSDYSQIELRVL 667
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPN 2005
AH S D L + D+ A R G ++ED V R Q K + +GI+YG+
Sbjct: 668 AHISNDEHLKEAFVEGQ-DIHASTAMRVFGVEKAED-VTPNMRRQAKAVNFGIVYGISDY 725
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS +L + +A++ I ++ +PGV ++ V KGYVE+L R+R+LS I
Sbjct: 726 GLSPKLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSR 785
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
N +S A+R A+N+ QGSAADI+KIAMI +A + K + +
Sbjct: 786 NFNLRSFAERTAINTPIQGSAADILKIAMI---------------EMARRLKEEKLQATM 830
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV S +++ LV++ ME A L VPL+ G TW
Sbjct: 831 LLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTW 878
>gi|456989011|gb|EMG23902.1| DNA-directed DNA polymerase [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 768
Score = 228 bits (580), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 276/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEV--KKR 1681
G N+ + LEN G +L+ + D + S++L P+ R + +L KE
Sbjct: 259 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEFLNYNT 311
Query: 1682 LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
++ E +G+ K ++ A+ + L+++ + + +E +L
Sbjct: 312 ITYEDLVG---TGKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 368
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 369 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGGPFNIASTKELQK 428
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 429 ILFDDLKLRIVKKTQTGF---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 485
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 486 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 524
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 525 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHKRTAAALY 582
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 583 GVPEIDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 642
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 643 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 702
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 703 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 747
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 748 MSLDLPIVVEGKFGVNW 764
>gi|755588|gb|AAA85558.1| DNA polymerase [Geobacillus stearothermophilus]
Length = 954
Score = 228 bits (580), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 236/466 (50%), Gaps = 40/466 (8%)
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
R+ A AL L L E L +E L +LA+ME G+ VD + Q
Sbjct: 525 LVRKAAAIWALEEPLMDELRRNEQDRLLTELEHALAGILANMEFTGVKVDTKRLEQMGAE 584
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
L ++L+ +E++ Y LAG +F++ + + VL+ L+LP+ + K K ST L+
Sbjct: 585 LTEQLQAVERRIYELAGQEFNINSPKQLGTVLFDKLQLPVLK---KTKTGYSTSADVLEK 641
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L H IV I +R L KL + + + + + T K +H + Q T TGRLS
Sbjct: 642 LAPHHEIVEHILHYRQLGKLQSTYIEGLLKV--VHPVTGK--VHTMFNQALTQTGRLSSV 697
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + +E + KI R F+PS+ +W++ AADYSQIELR++
Sbjct: 698 EPNLQNIPIRLE---------------EGRKI--RQAFVPSEPDWLIFAADYSQIELRVL 740
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH ++D LI + D+ T A SE+ V + R Q K + +GI+YG+ L
Sbjct: 741 AHIAEDDNLIEAFRR-WLDIHTKTAMDIFHVSEEDVTANMRRQAKAVNFGIVYGISDYGL 799
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
++ LN + EA E I+ + +SFPGV ++ V QKGYV +L R+R+L I N
Sbjct: 800 AQNLNITRKEAAEFIERYFASFPGVKQYMDNIVQEAKQKGYVTTLLHRRRYLPDITSRNF 859
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
++ A+R A+N+ QGSAADIIK AMI+ L+ + + + + RLLL
Sbjct: 860 NVRTFAERTAMNTPIQGSAADIIKKAMID---------------LSVSVREERLQARLLL 904
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
Q HDEL+LE I LV + ME A L VPL V G TW
Sbjct: 905 QGHDELILEAPKEEIGRLCRLVPEVMEQAVTLRVPLKVDYHYGPTW 950
>gi|339302165|ref|ZP_08651231.1| DNA-directed DNA polymerase I [Streptococcus agalactiae ATCC 13813]
gi|319744359|gb|EFV96719.1| DNA-directed DNA polymerase I [Streptococcus agalactiae ATCC 13813]
Length = 880
Score = 228 bits (580), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 232/456 (50%), Gaps = 41/456 (8%)
Query: 1719 CSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKK 1778
+++ +L V+E+ E L +E PL NVLA ME+ GI V + QK + L ++
Sbjct: 461 ANIMQQLKVNEQE-ELLFEMEQPLANVLAKMEIRGIKVKKNTLNEMAIENQKVIETLTQE 519
Query: 1779 AYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVI 1838
Y LAG +F++ + + +L+ L LP+ E K K ST L+ L P+V I
Sbjct: 520 IYELAGQEFNINSPKQLGKLLFETLGLPV-EMTKKTKTGYSTAVDVLERLAPISPLVTKI 578
Query: 1839 KEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMV 1898
E+R + KL + I L + K +H ++Q T TGRLS +PNLQ +
Sbjct: 579 LEYRQITKLQST---YIIGLQDYILEDGK--IHTRYVQDLTQTGRLSSSDPNLQNIP--- 630
Query: 1899 EFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIG 1958
++ ++ R F+PS++N +LL++DYSQIELR++AH SKD LI
Sbjct: 631 -------------VRLEQGRL-IRKAFVPSEDNAVLLSSDYSQIELRVLAHISKDEHLIA 676
Query: 1959 LLSKPHGDVFTMIAARWTG-RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
K D+ T A R G ++V +R K + +GI+YG+ LS L
Sbjct: 677 AF-KEGADIHTSTAMRVFGIEKPENVTPNDRRNAKAVNFGIVYGISDFGLSHNLGIPRKL 735
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
AK+ I ++ +PG+ +++ V KGYVE+L R+R L I N + A+R A
Sbjct: 736 AKQYIDTYFERYPGIKNYMETVVREAKDKGYVETLFHRRRSLPDINSRNFNIRQFAERTA 795
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+NS QGSAADI+KIAMIN+ ++ G YK ++LLQVHDE+VLEV
Sbjct: 796 INSPIQGSAADILKIAMINLDRVLDKGGYK---------------SKMLLQVHDEIVLEV 840
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
I LV K MESA L VPL+ G TW
Sbjct: 841 PNEEIGAIKELVTKTMESAISLSVPLIADENAGETW 876
>gi|160880934|ref|YP_001559902.1| DNA polymerase I [Clostridium phytofermentans ISDg]
gi|160429600|gb|ABX43163.1| DNA polymerase I [Clostridium phytofermentans ISDg]
Length = 994
Score = 228 bits (580), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 261/527 (49%), Gaps = 52/527 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNL-EKEVKKRLSSE-----AAAAANRSGRWKNQMRRAAHN 1706
D+ I ++L PD + EK ++ L SE A+ S ++Q ++AA
Sbjct: 510 FDVTIAGYLLEPDASTYEYQTIAEKYLELDLPSEKEVFSGQTYASLSLLDQDQYKKAA-- 567
Query: 1707 GCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
C + VL KLL L+ IE+PLV L DME GI VD G +
Sbjct: 568 --CYESYVAHHIYPVLLKLLSERGLLPLFAGIEMPLVYTLYDMEQRGIRVDTNGLKDYSD 625
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
L + LEK+ + L G++F++ + + +L+ L L + K K ST L+
Sbjct: 626 QLGVSIVELEKQIFELVGVEFNINSPKQLGEILFQRLGLSYGK---KTKTGYSTSAEVLE 682
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHP++ +I ++R L KL S + +S +HG + QT ATGRLS
Sbjct: 683 KLSSEHPVIKLILQYRQLTKL-----KSTYADGLVSYVEGDGRIHGTFNQTIAATGRLSS 737
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
EPNLQ + +E R FIP ++ ++ L ADYSQIELRL
Sbjct: 738 TEPNLQNIPIRMELGRK-----------------IRKVFIP-EDGYLFLDADYSQIELRL 779
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
+AH S D LI + D+ + A+ D V S +R K + +GI+YG+ +
Sbjct: 780 LAHMSNDARLIEAYRQAQ-DIHRLTASEVFHTPFDEVTSAQRSNAKAVNFGIVYGISSFS 838
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
L + L+ + EA+E I + ++PGV ++L + + G V++L GR R + + N
Sbjct: 839 LGQDLDITRKEAEEYINKYFMTYPGVKTYLDGLIEEGKETGVVKTLYGRIRPVPNLTNSN 898
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
++S +R A+NS QG+AADI+K+AMI+++ ++ + K + RLL
Sbjct: 899 FMKRSAEERIAMNSPIQGTAADIMKLAMIHVNQVL---------------KERKLKSRLL 943
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LQ+HDEL++E S ++E ++++ M+ AA L VPL V++ G+ W
Sbjct: 944 LQIHDELLVETHESEVEEVAKIMKEEMQQAASLSVPLEVEVANGNNW 990
>gi|72382587|ref|YP_291942.1| DNA polymerase I [Prochlorococcus marinus str. NATL2A]
gi|72002437|gb|AAZ58239.1| DNA polymerase A [Prochlorococcus marinus str. NATL2A]
Length = 986
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 247/492 (50%), Gaps = 61/492 (12%)
Query: 1702 RAAHNGCCRRVAQTRALCSVLWKLL--VSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
++A C V TR L + L S +LI L +E PL VLA++E GI +D
Sbjct: 532 KSASMYCGMDVYLTRKLAIIYINRLKETSTKLINLLKEVEQPLEQVLAEIESTGIIIDTP 591
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPS 1819
L KKL +EK+ Y +AG +F+L + + +L+ L L + K K S
Sbjct: 592 YLKDLSLELTKKLNTIEKEVYNIAGSEFNLSSPKQLGELLFEKLDLDRKKSR-KTKTGWS 650
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTST 1879
TD L+ L +HPIV +I EHRT++KLLN + ++ L + + +H + Q T
Sbjct: 651 TDVAVLEKLESDHPIVKMIIEHRTISKLLNTYVDALPKL----IEKETGRVHTDFNQAVT 706
Query: 1880 ATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADY 1939
ATGRLS PNLQ + EF R F+P Q++W LL+ADY
Sbjct: 707 ATGRLSSSNPNLQNIPVRTEFSR-----------------RIRKAFLP-QKDWKLLSADY 748
Query: 1940 SQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGIL 1999
SQIELR++ H S + L K + DV ++ A + D++ + ER K + +G++
Sbjct: 749 SQIELRILTHLSGEEVLKNAYLK-NEDVHSLTAKLLFEK--DAIDADERRIGKTINFGVI 805
Query: 2000 YGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFL 2059
YGMG + S EAK + FK +P V ++L +G+VE+L GR+R+
Sbjct: 806 YGMGAQRFARSTGVSLIEAKYFLSKFKERYPAVFNFLEYQERLALSQGFVETLLGRRRYF 865
Query: 2060 SKIKFG---------NNKEKSKAQRQ---------AVNSICQGSAADIIKIAMINIHSII 2101
K G N + + A+R A N+ QGS+ADIIK+AMI +HS +
Sbjct: 866 HFNKNGLGRLLGTPPNEIDLTTARRAGMEAQQLRAAANAPIQGSSADIIKLAMIQLHSAL 925
Query: 2102 VGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLV 2161
++ LAA ++LLQVHDELVLEV+P ++E LV+ ME+A L V
Sbjct: 926 ------RETGLAA---------KILLQVHDELVLEVNPKDLEETKLLVKNTMENAVKLSV 970
Query: 2162 PLLVKIQVGSTW 2173
PL+V+ VG W
Sbjct: 971 PLIVETGVGVNW 982
>gi|455791100|gb|EMF42926.1| DNA-directed DNA polymerase [Leptospira interrogans serovar Lora str.
TE 1992]
Length = 917
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 265/528 (50%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEV--KKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D + S++L P+ R + +L KE ++ E +G+ K ++
Sbjct: 430 FDTMLASYVLRPEGRRHNMDDLAKEFLNYNTITYEDLVG---TGKKKKELTDIDPEQVAE 486
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + + +E +L +E+PL++VLA ME GI +D+ +
Sbjct: 487 YAAEDADVTFRLYQIFRKSIKDSGVEPILREMEMPLISVLAKMEKTGIALDVPYFEELAR 546
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ +LKL I + G STD L+
Sbjct: 547 DFDREIRHLESEIHRQAGGPFNIASTKELQKILFDNLKLRIVKKTQTGF---STDHEVLE 603
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPI+ + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 604 ELVGEHPIIEKLLDYRKYTKLKSTYVDALPKM----VNPKTGRIHTSYNQTIAATGRLSS 659
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D R F ++ +L+ DYSQIELR+
Sbjct: 660 TDPNLQNIPIR-----------------DREGRLLRKGFTVDSNDYEILSLDYSQIELRI 702
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA++ + HG D+ AA G E V + RD+ K + + ++YG+ P
Sbjct: 703 MAHISKDPAMLEAYN--HGLDIHKRTAAALYGVPEIDVTHEMRDKAKVVNFSVIYGVTPY 760
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L +EAK I+ + + +PGV S++ V + GYV++L GR+R ++ I
Sbjct: 761 GLSRNLRIPRDEAKSFIERYMTQYPGVKSYMDSMVEFAEKNGYVQTLTGRRRPVTDINST 820
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 821 HKSAKEAAKRIAINSPIQGTSADMIKIAMIKIHEDIEKKHYK---------------SRM 865
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV + + ++K ME+A L +P++V+ + G W
Sbjct: 866 LLQVHDELVFEVHKKEKDDFKASMKKHMETAMSLDLPIVVEGKFGVNW 913
>gi|449919251|ref|ZP_21797809.1| DNA polymerase I [Streptococcus mutans 1SM1]
gi|449159604|gb|EMB62930.1| DNA polymerase I [Streptococcus mutans 1SM1]
Length = 878
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 241/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEELI----------EALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE I + L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPIRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|450115127|ref|ZP_21863760.1| DNA polymerase I [Streptococcus mutans ST1]
gi|449228389|gb|EMC27760.1| DNA polymerase I [Streptococcus mutans ST1]
Length = 878
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 241/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEELI----------EALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE I + L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPIRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|449894435|ref|ZP_21789259.1| DNA polymerase I [Streptococcus mutans SF12]
gi|450035551|ref|ZP_21835047.1| DNA polymerase I [Streptococcus mutans M21]
gi|450083729|ref|ZP_21853087.1| DNA polymerase I [Streptococcus mutans N66]
gi|450111879|ref|ZP_21862898.1| DNA polymerase I [Streptococcus mutans SM6]
gi|449195338|gb|EMB96666.1| DNA polymerase I [Streptococcus mutans M21]
gi|449212730|gb|EMC13083.1| DNA polymerase I [Streptococcus mutans N66]
gi|449223177|gb|EMC22880.1| DNA polymerase I [Streptococcus mutans SM6]
gi|449255330|gb|EMC53187.1| DNA polymerase I [Streptococcus mutans SF12]
Length = 878
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 241/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEELI----------EALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE I + L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPIRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|417763867|ref|ZP_12411842.1| DNA-directed DNA polymerase [Leptospira interrogans str. 2002000624]
gi|417776000|ref|ZP_12423844.1| DNA-directed DNA polymerase [Leptospira interrogans str. 2002000621]
gi|418672044|ref|ZP_13233386.1| DNA-directed DNA polymerase [Leptospira interrogans str. 2002000623]
gi|409940343|gb|EKN85985.1| DNA-directed DNA polymerase [Leptospira interrogans str. 2002000624]
gi|410574204|gb|EKQ37242.1| DNA-directed DNA polymerase [Leptospira interrogans str. 2002000621]
gi|410580648|gb|EKQ48467.1| DNA-directed DNA polymerase [Leptospira interrogans str. 2002000623]
Length = 917
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 265/528 (50%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEV--KKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D + S++L P+ R + +L KE ++ E +G+ K ++
Sbjct: 430 FDTMLASYVLRPEGRRHNMDDLAKEFLNYNTITYEDLVG---TGKKKKELTDIDPEQVAE 486
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + + +E +L +E+PL++VLA ME GI +D+ +
Sbjct: 487 YAAEDADVTFRLYQIFRKSIKDSGVEPILREMEMPLISVLAKMEKTGIALDVPYFEELAR 546
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ +LKL I + G STD L+
Sbjct: 547 DFDREIRHLESEIHRQAGGPFNIASTKELQKILFDNLKLRIVKKTQTGF---STDHEVLE 603
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPI+ + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 604 ELVGEHPIIEKLLDYRKYTKLKSTYVDALPKM----VNPKTGRIHTSYNQTIAATGRLSS 659
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D R F ++ +L+ DYSQIELR+
Sbjct: 660 TDPNLQNIPIR-----------------DREGRLLRKGFTVDSNDYEILSLDYSQIELRI 702
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA++ + HG D+ AA G E V + RD+ K + + ++YG+ P
Sbjct: 703 MAHISKDPAMLEAYN--HGLDIHKRTAAALYGVPEIDVTHEMRDKAKVVNFSVIYGVTPY 760
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L +EAK I+ + + +PGV S++ V + GYV++L GR+R ++ I
Sbjct: 761 GLSRNLRIPRDEAKSFIERYMTQYPGVKSYMDSMVEFAEKNGYVQTLTGRRRPVTDINST 820
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 821 HKSAKEAAKRIAINSPIQGTSADMIKIAMIKIHEDIEKKHYK---------------SRM 865
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV + + ++K ME+A L +P++V+ + G W
Sbjct: 866 LLQVHDELVFEVHKKEKDDFKASMKKHMETAMSLDLPIVVEGKFGVNW 913
>gi|421894598|ref|ZP_16325085.1| DNA polymerase I [Pediococcus pentosaceus IE-3]
gi|385272513|emb|CCG90457.1| DNA polymerase I [Pediococcus pentosaceus IE-3]
Length = 887
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 268/545 (49%), Gaps = 48/545 (8%)
Query: 1630 TSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAA 1689
T +GL +G + L+ V+ D+ + S++L +D + L E
Sbjct: 386 TYVGLHRLG---IKLTAVNF----DILLQSYLLDTNDNSNDLGQLAHEHDYDAIDTDDDV 438
Query: 1690 ANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADM 1749
+ + + N R++A L L + LV E +IE+PL VLA M
Sbjct: 439 YGKGAKRAVPEQTELFNHLARKLAAINFLGKQLDQELVKNEQNNLYWDIELPLAIVLAKM 498
Query: 1750 ELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPE 1809
E+ GI VD Q ++ ++L +E Y AG +F+L + + VL+ LKLPI +
Sbjct: 499 EISGIKVDRNRLNQMQSEFTERLSEIETNIYNEAGEEFNLNSPKQLGVVLFEKLKLPIIK 558
Query: 1810 GHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYT 1869
K K ST L+ L+ E PI+ I +RTL+K+ + + + + + T
Sbjct: 559 ---KTKTGYSTAVDVLEKLQGESPIIDNILNYRTLSKIKSTYVDGLLKV----IHTTDEK 611
Query: 1870 LHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQ 1929
+H ++QT T TGRLS +PNLQ + +E + KI R F+P++
Sbjct: 612 VHTTYVQTLTQTGRLSSIDPNLQNIPVRIE---------------EGRKI--RQAFVPAR 654
Query: 1930 ENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDS-VGSQER 1988
E W +L++DYSQIELR++AH + D L K D+ A + G + S V R
Sbjct: 655 EGWHILSSDYSQIELRVLAHITGDQNLQEAF-KNGEDIHATTAVKIFGLKDASEVTPNIR 713
Query: 1989 DQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGY 2048
Q K + +GI+YG+ LS+ + S +AK+ I+++ FPGV ++ +V ++GY
Sbjct: 714 RQAKAVNFGIVYGISDYGLSQNIGISRKDAKKFIETYFKEFPGVKKYIDESVQLAKEQGY 773
Query: 2049 VESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKP 2108
VE++ R+R+L I + +S A+R A+N+ QGSAADIIKIAMI++ +
Sbjct: 774 VETIAHRRRYLPDINSSSFNLRSFAERTAMNTPIQGSAADIIKIAMIDMEN--------- 824
Query: 2109 DSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQ 2168
+ + R+LLQVHDEL+ EV + LV K M+SA L VPL V
Sbjct: 825 ------ELEKRNLKSRMLLQVHDELIFEVPDGEMTLMKELVPKVMDSAVKLDVPLKVGAA 878
Query: 2169 VGSTW 2173
G+TW
Sbjct: 879 WGNTW 883
>gi|375091430|ref|ZP_09737723.1| DNA polymerase I [Helcococcus kunzii ATCC 51366]
gi|374563530|gb|EHR34843.1| DNA polymerase I [Helcococcus kunzii ATCC 51366]
Length = 878
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 277/535 (51%), Gaps = 55/535 (10%)
Query: 1647 VHLKDGI-DMCIVSWILWPDDERS----SNPNLEKEVKKRLSSEAAAAANRSGRWKN--Q 1699
++L+D D+ I+S+++ P + S S LEK++K S E +S + +
Sbjct: 388 INLEDNYQDLMIISYLINPKGDYSLKDISFTELEKDIK---SLEEYLGKGKSAKTLEDLE 444
Query: 1700 MRRAAHNGCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDME 1759
M +L S+L KL S +I L +I++PLV VLA ME+ GI +D
Sbjct: 445 MVYVEEYLSNNLFVIEHSLNSLLDKLKDSN-MIHLLEDIDLPLVKVLAHMEILGIQIDRN 503
Query: 1760 GCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPS 1819
+ + +++ L Y LAG +F++ + + +L+ LKLP+ + K K S
Sbjct: 504 EFEKLDIEINERIEELTNSIYNLAGEEFNINSPKQLGEILFEKLKLPVIK---KTKTGYS 560
Query: 1820 TDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTST 1879
T+ L LR+EH I+P+I+++R ++KL + + I + ++ +H + QT
Sbjct: 561 TNIDVLSKLRNEHEIIPLIEQYRQVSKLKGTYIDGL-----IKVISKDGRIHSKFNQTVA 615
Query: 1880 ATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADY 1939
ATGRLS +PNLQ + E G R F+ E+ +L++ADY
Sbjct: 616 ATGRLSSTDPNLQNIPIKTE---------EGRM--------IRKAFVAG-EDKLLVSADY 657
Query: 1940 SQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGI 1998
SQIELR++A +KD ++ HG D+ T A+ D V +R + K + +GI
Sbjct: 658 SQIELRVLAALTKDKNMLDAFE--HGIDIHTKTASEVFKVDLDKVTKLQRSEAKAVNFGI 715
Query: 1999 LYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRF 2058
+YG+ LSE L+ +AK+ I+ + +S+P ++ ++ V + GYVE+L R+R+
Sbjct: 716 VYGISDYGLSEDLSIPRKQAKQYIEEYLASYPEISKYMESIVKKAKEDGYVETLFNRRRY 775
Query: 2059 LSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQM 2118
+ ++K N +S +R A+N+ QG+AADIIKIAMIN++ +
Sbjct: 776 IPELKSSNFNVRSFGERIALNTPIQGTAADIIKIAMINVYE---------------RLKK 820
Query: 2119 LKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
K +L+LQ+HDEL++E D S +++ ++ + M++A + V LLV++ G TW
Sbjct: 821 EKLNSKLILQIHDELIIETDKSELEKVKKILTEEMQNAVDINVKLLVEVDSGETW 875
>gi|456822936|gb|EMF71406.1| DNA-directed DNA polymerase [Leptospira interrogans serovar Canicola
str. LT1962]
Length = 917
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 265/528 (50%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEV--KKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D + S++L P+ R + +L KE ++ E +G+ K ++
Sbjct: 430 FDTMLASYVLRPEGRRHNMDDLAKEFLNYNTITYEDLVG---TGKKKKELTDIDPEQVAE 486
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + + +E +L +E+PL++VLA ME GI +D+ +
Sbjct: 487 YAAEDADVTFRLYQIFRKSIKDSGVEPILREMEMPLISVLAKMEKTGIALDVPYFEELAR 546
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ +LKL I + G STD L+
Sbjct: 547 DFDREIRHLESEIHRQAGGPFNIASTKELQKILFDNLKLRIVKKTQTGF---STDHEVLE 603
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPI+ + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 604 ELVGEHPIIEKLLDYRKYTKLKSTYVDALPKM----VNPKTGRIHTSYNQTIAATGRLSS 659
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D R F ++ +L+ DYSQIELR+
Sbjct: 660 TDPNLQNIPIR-----------------DREGRLLRKGFTVDSNDYEILSLDYSQIELRI 702
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA++ + HG D+ AA G E V + RD+ K + + ++YG+ P
Sbjct: 703 MAHISKDPAMLEAYN--HGLDIHKRTAAALYGVPEIDVTHEMRDKAKVVNFSVIYGVTPY 760
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L +EAK I+ + + +PGV S++ V + GYV++L GR+R ++ I
Sbjct: 761 GLSRNLRIPRDEAKSFIERYMTQYPGVKSYMDSMVKFAEKNGYVQTLTGRRRPVTDINST 820
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 821 HKSAKEAAKRIAINSPIQGTSADMIKIAMIKIHEDIEKKHYK---------------SRM 865
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV + + ++K ME+A L +P++V+ + G W
Sbjct: 866 LLQVHDELVFEVHKKEKDDFKASMKKHMETAMSLDLPIVVEGKFGVNW 913
>gi|449950508|ref|ZP_21808293.1| DNA polymerase I [Streptococcus mutans 11SSST2]
gi|450053672|ref|ZP_21841639.1| DNA polymerase I [Streptococcus mutans NFSM1]
gi|449167189|gb|EMB70091.1| DNA polymerase I [Streptococcus mutans 11SSST2]
gi|449198688|gb|EMB99792.1| DNA polymerase I [Streptococcus mutans NFSM1]
Length = 878
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 241/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEELI----------EALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE I + L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPIRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|418708318|ref|ZP_13269124.1| DNA-directed DNA polymerase [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418723234|ref|ZP_13282076.1| DNA-directed DNA polymerase [Leptospira interrogans str. UI 12621]
gi|421126609|ref|ZP_15586839.1| DNA-directed DNA polymerase [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135339|ref|ZP_15595462.1| DNA-directed DNA polymerase [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|409963360|gb|EKO27086.1| DNA-directed DNA polymerase [Leptospira interrogans str. UI 12621]
gi|410020409|gb|EKO87211.1| DNA-directed DNA polymerase [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410435834|gb|EKP84960.1| DNA-directed DNA polymerase [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410771321|gb|EKR46528.1| DNA-directed DNA polymerase [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|456967099|gb|EMG08530.1| DNA-directed DNA polymerase [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 917
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 265/528 (50%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEV--KKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D + S++L P+ R + +L KE ++ E +G+ K ++
Sbjct: 430 FDTMLASYVLRPEGRRHNMDDLAKEFLNYNTITYEDLVG---TGKKKKELTDIDPEQVAE 486
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + + +E +L +E+PL++VLA ME GI +D+ +
Sbjct: 487 YAAEDADVTFRLYQIFRKSIKDSGVEPILREMEMPLISVLAKMEKTGIALDVPYFEELAR 546
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ +LKL I + G STD L+
Sbjct: 547 DFDREIRHLESEIHRQAGGPFNIASTKELQKILFDNLKLRIVKKTQTGF---STDHEVLE 603
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPI+ + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 604 ELVGEHPIIEKLLDYRKYTKLKSTYVDALPKM----VNPKTGRIHTSYNQTIAATGRLSS 659
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D R F ++ +L+ DYSQIELR+
Sbjct: 660 TDPNLQNIPIR-----------------DREGRLLRKGFTVDSNDYEILSLDYSQIELRI 702
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA++ + HG D+ AA G E V + RD+ K + + ++YG+ P
Sbjct: 703 MAHISKDPAMLEAYN--HGLDIHKRTAAALYGVPEIDVTHEMRDKAKVVNFSVIYGVTPY 760
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L +EAK I+ + + +PGV S++ V + GYV++L GR+R ++ I
Sbjct: 761 GLSRNLRIPRDEAKSFIERYMTQYPGVKSYMDSMVEFAEKNGYVQTLTGRRRPVTDINST 820
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 821 HKSAKEAAKRIAINSPIQGTSADMIKIAMIKIHEDIEKKHYK---------------SRM 865
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV + + ++K ME+A L +P++V+ + G W
Sbjct: 866 LLQVHDELVFEVHKKEKDDFKASMKKHMETAMSLDLPIVVEGKFGVNW 913
>gi|450047398|ref|ZP_21839413.1| DNA polymerase I [Streptococcus mutans N34]
gi|450140852|ref|ZP_21872998.1| DNA polymerase I [Streptococcus mutans NLML1]
gi|450146076|ref|ZP_21874835.1| DNA polymerase I [Streptococcus mutans 1ID3]
gi|450174885|ref|ZP_21884860.1| DNA polymerase I [Streptococcus mutans SM1]
gi|449148653|gb|EMB52504.1| DNA polymerase I [Streptococcus mutans 1ID3]
gi|449197703|gb|EMB98858.1| DNA polymerase I [Streptococcus mutans N34]
gi|449231411|gb|EMC30598.1| DNA polymerase I [Streptococcus mutans NLML1]
gi|449247966|gb|EMC46233.1| DNA polymerase I [Streptococcus mutans SM1]
Length = 878
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 241/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEELI----------EALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE I + L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPIRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|449966620|ref|ZP_21812399.1| DNA polymerase I [Streptococcus mutans 15VF2]
gi|449169900|gb|EMB72650.1| DNA polymerase I [Streptococcus mutans 15VF2]
Length = 878
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 242/483 (50%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEE----------LIEALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE ++ L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPMRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMKRANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|260584166|ref|ZP_05851914.1| DNA polymerase I [Granulicatella elegans ATCC 700633]
gi|260158792|gb|EEW93860.1| DNA polymerase I [Granulicatella elegans ATCC 700633]
Length = 883
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 236/454 (51%), Gaps = 44/454 (9%)
Query: 1722 LWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYT 1781
L K L E + +E+PL ++LA ME+ GI VD ++ +++L+ +E+ Y
Sbjct: 468 LLKQLDENEQAQLYWEMELPLSDILARMEIQGIRVDQNRLIEMGLQFEERLKEIEQTIYE 527
Query: 1782 LAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEH 1841
LAG +F++ + + +L+ + LP+ + K K ST L+ L + PIV I E+
Sbjct: 528 LAGEEFNINSPKQLGVILFEKMNLPVIK---KTKTGYSTAVDVLEKLASQSPIVECILEY 584
Query: 1842 RTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFK 1901
R LAKL + + + + +K +H ++Q T TGRLS ++PNLQ + E
Sbjct: 585 RQLAKLNSTYVEGLQTYI-----DEKGKIHTRFVQNLTQTGRLSSQDPNLQNIPIRTE-- 637
Query: 1902 MSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLS 1961
G R F+PS W LL++DYSQIELR++AH + D +I
Sbjct: 638 -------EGR--------QVRSAFLPSHPEWKLLSSDYSQIELRVLAHMANDVHMIEAF- 681
Query: 1962 KPHGDVFTMIAARWTG-RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKE 2020
K + D+ T A R G ++ + V S R Q K + +GI+YG+ LS+ LN +AKE
Sbjct: 682 KNNIDIHTNTAMRVFGIQNPEEVTSSMRRQAKAVNFGIVYGISDYGLSQNLNIPRKKAKE 741
Query: 2021 KIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNS 2080
I + F GV ++ V+ Q YVE+L R+R+L +I N +S A+R A+NS
Sbjct: 742 FIDRYLEEFQGVKDYMETIVAEARQNDYVETLFHRRRYLPEIHSSNFNIRSFAERTAMNS 801
Query: 2081 ICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAA-NFQMLKGRCRLLLQVHDELVLEVDP 2139
QG+AADI+K+AMI + D L NFQ +LLLQVHDEL+ EV
Sbjct: 802 PIQGTAADILKVAMIEL-----------DRELTERNFQ-----AKLLLQVHDELIFEVPE 845
Query: 2140 SVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++ SLV++ ME+A L VPL +G+ W
Sbjct: 846 EEVESLQSLVEEVMENAVSLSVPLKADSNIGNNW 879
>gi|421120613|ref|ZP_15580922.1| DNA-directed DNA polymerase [Leptospira interrogans str. Brem 329]
gi|410346473|gb|EKO97457.1| DNA-directed DNA polymerase [Leptospira interrogans str. Brem 329]
Length = 917
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 265/528 (50%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEV--KKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D + S++L P+ R + +L KE ++ E +G+ K ++
Sbjct: 430 FDTMLASYVLRPEGRRHNMDDLAKEFLNYNTITYEDLVG---TGKKKKELTDIDPEQVAE 486
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + + +E +L +E+PL++VLA ME GI +D+ +
Sbjct: 487 YAAEDADVTFRLYQIFRKSIKDSGVEPILREMEMPLISVLAKMEKTGIALDVPYFEELAR 546
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ +LKL I + G STD L+
Sbjct: 547 DFDREIRHLESEIHRQAGGPFNIASTKELQKILFDNLKLRIVKKTQTGF---STDHEVLE 603
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPI+ + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 604 ELVGEHPIIEKLLDYRKYTKLKSTYVDALPKM----VNPKTGRIHTSYNQTIAATGRLSS 659
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D R F ++ +L+ DYSQIELR+
Sbjct: 660 TDPNLQNIPIR-----------------DREGRLLRKGFTVDSNDYEILSLDYSQIELRI 702
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA++ + HG D+ AA G E V + RD+ K + + ++YG+ P
Sbjct: 703 MAHISKDPAMLEAYN--HGLDIHKRTAAALYGVPEIDVTHEMRDKAKVVNFSVIYGVTPY 760
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L +EAK I+ + + +PGV S++ V + GYV++L GR+R ++ I
Sbjct: 761 GLSRNLRIPRDEAKSFIERYMTQYPGVKSYMDSMVEFAEKNGYVQTLTGRRRPVTDINST 820
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 821 HKSAKEAAKRIAINSPIQGTSADMIKIAMIKIHEDIEKKHYK---------------SRM 865
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV + + ++K ME+A L +P++V+ + G W
Sbjct: 866 LLQVHDELVFEVHKKEKDDFKASMKKHMETAMSLDLPIVVEGKFGVNW 913
>gi|421115413|ref|ZP_15575821.1| DNA-directed DNA polymerase [Leptospira interrogans serovar Canicola
str. Fiocruz LV133]
gi|410013191|gb|EKO71274.1| DNA-directed DNA polymerase [Leptospira interrogans serovar Canicola
str. Fiocruz LV133]
Length = 917
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 276/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEV--KKR 1681
G N+ + LEN G +L+ + D + S++L P+ R + +L KE
Sbjct: 408 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEFLNYNT 460
Query: 1682 LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
++ E +G+ K ++ A+ + L+++ + + +E +L
Sbjct: 461 ITYEDLVG---TGKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 518 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGGPFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 578 ILFDDLKLRIVKKTQTGF---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 635 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 673
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 674 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHKRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPEIDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 792 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 852 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 897 MSLDLPIVVEGKFGVNW 913
>gi|417004515|ref|ZP_11943248.1| DNA polymerase I [Streptococcus agalactiae FSL S3-026]
gi|341578314|gb|EGS28711.1| DNA polymerase I [Streptococcus agalactiae FSL S3-026]
Length = 880
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 232/456 (50%), Gaps = 41/456 (8%)
Query: 1719 CSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKK 1778
+++ +L V+E+ E L +E PL NVLA ME+ GI V + QK + L ++
Sbjct: 461 ANIMQQLKVNEQE-ELLFEMEQPLANVLAKMEIRGIKVKKNTLNEMAIENQKVIETLTQE 519
Query: 1779 AYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVI 1838
Y LAG +F++ + + +L+ L LP+ E K K ST L+ L P+V I
Sbjct: 520 IYELAGQEFNINSPKQLGKLLFETLGLPV-EMTKKTKTGYSTAVDVLERLAPISPLVTKI 578
Query: 1839 KEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMV 1898
E+R + KL + I L + K +H ++Q T TGRLS +PNLQ +
Sbjct: 579 LEYRQITKLQST---YIIGLQDYILEDGK--IHTRYVQDLTQTGRLSSSDPNLQNIP--- 630
Query: 1899 EFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIG 1958
++ ++ R F+PS++N +LL++DYSQIELR++AH SKD LI
Sbjct: 631 -------------VRLEQGRL-IRKAFVPSEDNAVLLSSDYSQIELRVLAHISKDEHLIA 676
Query: 1959 LLSKPHGDVFTMIAARWTG-RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNE 2017
K D+ T A R G ++V +R K + +GI+YG+ LS L
Sbjct: 677 AF-KEGADIHTSTAMRVFGIEKPENVTPNDRRNAKAVNFGIVYGISDFGLSHNLGIPRKL 735
Query: 2018 AKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQA 2077
AK+ I ++ +PG+ +++ V KGYVE+L R+R L I N + A+R A
Sbjct: 736 AKQYIDTYFERYPGIKNYMETVVREAKDKGYVETLFHRRRSLPDINSRNFNIRQFAERTA 795
Query: 2078 VNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEV 2137
+NS QGSAADI+KIAMIN+ ++ G YK ++LLQVHDE+VLEV
Sbjct: 796 INSPIQGSAADILKIAMINLDRVLDKGGYK---------------SKMLLQVHDEIVLEV 840
Query: 2138 DPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
I LV K MESA L VPL+ G TW
Sbjct: 841 PNEEIGAIKELVTKTMESAISLSVPLIADENAGETW 876
>gi|302391132|ref|YP_003826952.1| DNA polymerase I [Acetohalobium arabaticum DSM 5501]
gi|302203209|gb|ADL11887.1| DNA polymerase I [Acetohalobium arabaticum DSM 5501]
Length = 872
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 159/468 (33%), Positives = 249/468 (53%), Gaps = 44/468 (9%)
Query: 1712 VAQTRALCSVLWKL---LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLL 1768
V Q R L + KL L + L+E +++E+PL+ +LA MEL GI VD + + N L
Sbjct: 442 VQQVRILFKLQDKLTDKLADKGLMELFIDVELPLIPILAQMELNGIAVDQDMIQELSNKL 501
Query: 1769 QKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLL 1828
++KL L +AY LAG +F+L + + +L+ L LP+ + G ST L+ L
Sbjct: 502 EEKLDSLRSRAYELAGEEFNLNSPKQLGEILFEKLGLPVIKRTKTGY---STSASVLEKL 558
Query: 1829 RHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEE 1888
+H IVP+I E+R KL + + + L I+ T++ +H + Q TATGRLS E
Sbjct: 559 EDKHEIVPLILEYRKYQKLKSTYVDPLPDL--INPKTER--IHTSFNQLVTATGRLSSTE 614
Query: 1889 PNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMA 1948
PNLQ + E + +I R F+ ++E LLA DYSQIELR++A
Sbjct: 615 PNLQNIPIRTE---------------EGRRI--RKVFV-AEERKELLAVDYSQIELRVLA 656
Query: 1949 HFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLS 2008
H S+D LI + D+ T AA G V Q+R + K + +GI YG+ P L+
Sbjct: 657 HISQDENLIAAYREGQ-DIHTKTAAEVFGLEASEVSYQQRRRAKAINFGIAYGISPWGLA 715
Query: 2009 EQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNK 2068
+ +N S EA++ I + + +P V ++ + ++GYV ++ R+R+L +I N
Sbjct: 716 KDINVSKQEAEDYINQYLNRYPKVKEYMDHQIKQAKEEGYVTTILNRRRYLPEINSSNYH 775
Query: 2069 EKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQ 2128
+S +R A+N+ QGSAADI+K+AM+ +S+ + + L ++LLQ
Sbjct: 776 RRSFGERMAINTPIQGSAADIMKLAML-------------ESARVLDERELD--TKILLQ 820
Query: 2129 VHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
VHDEL+ EV P ++E +++ ME L VPL V ++VGS W +
Sbjct: 821 VHDELIFEVPPEELEEVQQVIKAEMEDVIELDVPLKVDLKVGSNWRDM 868
>gi|45656484|ref|YP_000570.1| DNA polymerase I [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|421084026|ref|ZP_15544891.1| DNA-directed DNA polymerase [Leptospira santarosai str. HAI1594]
gi|421101318|ref|ZP_15561932.1| DNA-directed DNA polymerase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45599719|gb|AAS69207.1| DNA polymerase I [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|410369114|gb|EKP24488.1| DNA-directed DNA polymerase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433468|gb|EKP77814.1| DNA-directed DNA polymerase [Leptospira santarosai str. HAI1594]
Length = 917
Score = 227 bits (579), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 276/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEV--KKR 1681
G N+ + LEN G +L+ + D + S++L P+ R + +L KE
Sbjct: 408 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEFLNYNT 460
Query: 1682 LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
++ E +G+ K ++ A+ + L+++ + + +E +L
Sbjct: 461 ITYEDLVG---TGKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 518 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGGPFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 578 ILFDDLKLRIVKKTQTGF---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 635 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 673
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 674 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHKRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPEIDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 792 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 852 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 897 MSLDLPIVVEGKFGVNW 913
>gi|417784320|ref|ZP_12432028.1| DNA-directed DNA polymerase [Leptospira interrogans str. C10069]
gi|409952580|gb|EKO07091.1| DNA-directed DNA polymerase [Leptospira interrogans str. C10069]
Length = 917
Score = 227 bits (579), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 265/528 (50%), Gaps = 51/528 (9%)
Query: 1653 IDMCIVSWILWPDDERSSNPNLEKEV--KKRLSSEAAAAANRSGRWKNQMRRAAHNGCCR 1710
D + S++L P+ R + +L KE ++ E +G+ K ++
Sbjct: 430 FDTMLASYVLRPEGRRHNMDDLAKEFLNYNTITYEDLVG---TGKKKKELTDIDPEQVAE 486
Query: 1711 RVAQTRALCSVLWKLL---VSEELIEALL-NIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
A+ + L+++ + + +E +L +E+PL++VLA ME GI +D+ +
Sbjct: 487 YAAEDADVTFRLYQIFRKSIKDSGVEPILREMEMPLISVLAKMEKTGIALDVPYFEELAR 546
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
+++R+LE + + AG F++ + ++ +L+ +LKL I + G STD L+
Sbjct: 547 DFDREIRHLESEIHRQAGGPFNIASTKELQKILFDNLKLRIVKKTQTGF---STDHEVLE 603
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L EHPI+ + ++R KL + + ++ + ++ + +H + QT ATGRLS
Sbjct: 604 ELVGEHPIIEKLLDYRKYTKLKSTYVDALPKM----VNPKTGRIHTSYNQTIAATGRLSS 659
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + D R F ++ +L+ DYSQIELR+
Sbjct: 660 TDPNLQNIPIR-----------------DREGRLLRKGFTVDSNDYEILSLDYSQIELRI 702
Query: 1947 MAHFSKDPALIGLLSKPHG-DVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPN 2005
MAH SKDPA+ L + HG D+ AA G E V + RD+ K + + ++YG+ P
Sbjct: 703 MAHISKDPAM--LEAYNHGLDIHKRTAAALYGVPEIDVTHEMRDKAKVVNFSVIYGVTPY 760
Query: 2006 TLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFG 2065
LS L +EAK I+ + + +PGV S++ V + GYV++L GR+R ++ I
Sbjct: 761 GLSRNLRIPRDEAKSFIERYMTQYPGVKSYMDSMVEFAEKNGYVQTLTGRRRPVTDINST 820
Query: 2066 NNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRL 2125
+ K A+R A+NS QG++AD+IKIAMI IH I YK R+
Sbjct: 821 HKSAKEAAKRIAINSPIQGTSADMIKIAMIKIHEDIEKKHYK---------------SRM 865
Query: 2126 LLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LLQVHDELV EV + + ++K ME+A L +P++V+ + G W
Sbjct: 866 LLQVHDELVFEVHKKEKDDFKASMKKHMETAMSLDLPIVVEGKFGVNW 913
>gi|418691398|ref|ZP_13252497.1| DNA-directed DNA polymerase [Leptospira interrogans str. FPW2026]
gi|418712370|ref|ZP_13273111.1| DNA-directed DNA polymerase [Leptospira interrogans str. UI 08452]
gi|400359576|gb|EJP15565.1| DNA-directed DNA polymerase [Leptospira interrogans str. FPW2026]
gi|410791127|gb|EKR84807.1| DNA-directed DNA polymerase [Leptospira interrogans str. UI 08452]
Length = 917
Score = 227 bits (579), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 276/557 (49%), Gaps = 58/557 (10%)
Query: 1624 GLNLVGTSLGLENVGSSFLLLSPVHLKDGIDMCIVSWILWPDDERSSNPNLEKEV--KKR 1681
G N+ + LEN G +L+ + D + S++L P+ R + +L KE
Sbjct: 408 GQNIKYDLIVLENHG---FVLNNIQF----DTMLASYVLRPEGRRHNMDDLAKEFLNYNT 460
Query: 1682 LSSEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLL---VSEELIEALL-N 1737
++ E +G+ K ++ A+ + L+++ + + +E +L
Sbjct: 461 ITYEDLVG---TGKKKKELTDIDPEQVAEYAAEDADVTFRLYQIFRKSIKDSGVEPILRE 517
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL++VLA ME GI +D+ + +++R+LE + + AG F++ + ++
Sbjct: 518 MEMPLISVLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGGPFNIASTKELQK 577
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+ LKL I + G STD L+ L EHPI+ + ++R KL + + ++
Sbjct: 578 ILFDDLKLRIVKKTQTGF---STDHEVLEELAGEHPIIEKLLDYRKYTKLKSTYVDALPK 634
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
+ ++ + +H + QT ATGRLS +PNLQ + D
Sbjct: 635 M----VNPKTGRIHTSYNQTIAATGRLSSTDPNLQNIPIR-----------------DRE 673
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHG-DVFTMIAARWT 1976
R F ++ +L+ DYSQIELR+MAH SKDPA++ + HG D+ AA
Sbjct: 674 GRLLRKGFTVDSNDYEILSLDYSQIELRIMAHISKDPAMLEAYN--HGLDIHKRTAAALY 731
Query: 1977 GRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWL 2036
G E V + RD+ K + + ++YG+ P LS L +EAK I+ + + +PGV S++
Sbjct: 732 GVPEIDVTHEMRDKAKVVNFSVIYGVTPYGLSRNLRIPRDEAKSFIERYMTQYPGVKSYM 791
Query: 2037 HVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMIN 2096
V + GYV++L GR+R ++ I + K A+R A+NS QG++AD+IKIAMI
Sbjct: 792 DSMVEFAEKNGYVQTLTGRRRPVTDINSTHKSAKEAAKRIAINSPIQGTSADMIKIAMIK 851
Query: 2097 IHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESA 2156
IH I YK R+LLQVHDELV EV + + ++K ME+A
Sbjct: 852 IHEDIEKKHYK---------------SRMLLQVHDELVFEVHKKEKDDFKASMKKHMETA 896
Query: 2157 ALLLVPLLVKIQVGSTW 2173
L +P++V+ + G W
Sbjct: 897 MSLDLPIVVEGKFGVNW 913
>gi|407692488|ref|YP_006817277.1| DNA polymerase I [Actinobacillus suis H91-0380]
gi|407388545|gb|AFU19038.1| DNA polymerase I [Actinobacillus suis H91-0380]
Length = 957
Score = 227 bits (578), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 172/590 (29%), Positives = 290/590 (49%), Gaps = 82/590 (13%)
Query: 1592 IMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKD 1651
++E DV+K N+K + + + V + G +F
Sbjct: 438 VLENDDVKKIGQNIKYDLTIFANHGVQV-----------------AGVAF---------- 470
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMR--RAAHNGCC 1709
D + S+ L + N+++ + L + +G+ KNQ+ + A +
Sbjct: 471 --DTMLESYTL----NSTGRHNMDELADRYLGHKTIEFEEIAGKGKNQLTFDKIAIDVAS 524
Query: 1710 RRVAQTRALCSVLWKLLVSE-----ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQA 1764
+ A+ + L ++L E L++ IE+PLV VL+ +E G+ +D E L
Sbjct: 525 QYAAEDADVTMKLHQVLAPELDKAPTLVKLFNEIEMPLVEVLSRIERNGVLIDPEKLLAQ 584
Query: 1765 RNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHC 1824
++++L LE+ ++ AG F+L + + +L+ L LP+ + KG PST++
Sbjct: 585 SAEIEQRLAELEQLVHSEAGEVFNLASTKQLQEILFTKLGLPVLKKTPKGA--PSTNEEV 642
Query: 1825 LDLLRHEHPIVP-VIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGR 1883
LD L + +VP ++ EHR L+KL + + + ++ + +H + Q TATGR
Sbjct: 643 LDELAGQGHLVPKLLMEHRGLSKLKSTYTDKLP----LMINPKTGRVHTSYHQAVTATGR 698
Query: 1884 LSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIE 1943
LS +PNLQ + + NE+ G R FI + + + ++AADYSQIE
Sbjct: 699 LSSSDPNLQNI------PIRNEE---GR--------RIRQAFI-ANKGYKIVAADYSQIE 740
Query: 1944 LRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMG 2003
LR+MAH + D +I ++ D+ AA G + D V S++R K + +G++YGM
Sbjct: 741 LRIMAHLANDEGMITAFAEGK-DIHRATAAEIFGLALDQVTSEQRRSAKAINFGLIYGMS 799
Query: 2004 PNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIK 2063
LS QL S +AK+ ++ + +P V ++ S +KGYVE+L GR+ +L +IK
Sbjct: 800 EFGLSNQLGISRADAKKYMERYFQRYPAVQQFMTDIRESASEKGYVETLFGRRLYLPEIK 859
Query: 2064 FGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRC 2123
N + A+R A+N+ QG+AADIIK+AMI I +I G D ++
Sbjct: 860 SSNAMRRKAAERVAINAPMQGTAADIIKVAMIGIDKVIRG-----DENI----------- 903
Query: 2124 RLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
++++QVHDELV EV +I+ L++ ME A L VPL+ ++ VG W
Sbjct: 904 KMIMQVHDELVFEVKEELIEHYSQLIKAEMEKAIQLKVPLIAEVGVGDNW 953
>gi|450121472|ref|ZP_21866347.1| DNA polymerase I [Streptococcus mutans ST6]
gi|449229203|gb|EMC28532.1| DNA polymerase I [Streptococcus mutans ST6]
Length = 878
Score = 227 bits (578), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 240/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEELI----------EALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE I + L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPIRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI + + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIRLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|332799559|ref|YP_004461058.1| DNA polymerase I [Tepidanaerobacter acetatoxydans Re1]
gi|332697294|gb|AEE91751.1| DNA polymerase I [Tepidanaerobacter acetatoxydans Re1]
Length = 864
Score = 227 bits (578), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 237/465 (50%), Gaps = 47/465 (10%)
Query: 1719 CSVLWKL--LVSEELIEALLN-----IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKK 1771
S L++L ++ E++ + L++ +E+P VLADME GI VD + KK
Sbjct: 440 TSYLFELKKIMDEKIKDCLMDKLFYEVEMPFSVVLADMEHAGIKVDFAKLQELSERFGKK 499
Query: 1772 LRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHE 1831
L L ++ Y LAG +F++ + + +L+ L LP+ + + K STD L+ LR
Sbjct: 500 LAALTEEIYDLAGTEFNINSPKQLGEILFEKLSLPVIK---RTKTGYSTDAEVLEKLRPS 556
Query: 1832 HPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNL 1891
HPI+ I E+R L K+ + + +L + + ++ + QT T+TGR+S EPNL
Sbjct: 557 HPIIEKILEYRFLMKMKSTYADGLSAL----VDKKTGRIYTSFNQTVTSTGRISSTEPNL 612
Query: 1892 QCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFS 1951
Q + E E H R F +LL+ DYSQIELR++AH S
Sbjct: 613 QNIPVKTE-------------EGKHI----RGVFTSDGPGHVLLSGDYSQIELRVLAHMS 655
Query: 1952 KDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQL 2011
+DP LI D+ A+ G + V RD+ K + +GI+YG+ L++ L
Sbjct: 656 QDPGLIEAFVSGE-DIHRRTASEVFGVPPEEVTPLLRDKAKAVNFGIIYGISDYGLAQNL 714
Query: 2012 NCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKS 2071
S+ EAKE I ++ + +PGV ++ + S GYV +L R+R++ I N +S
Sbjct: 715 GISNQEAKEYIDAYFARYPGVRDYIRETIRSAKALGYVTTLLNRRRYIPDINSRNYHLRS 774
Query: 2072 KAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHD 2131
A+R AVN+ QGSAADIIKIAM+ +H N + + ++LLQVHD
Sbjct: 775 FAERTAVNTPIQGSAADIIKIAMVKVHD---------------NLRQNNLKAKILLQVHD 819
Query: 2132 ELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSL 2176
EL+L+V + ++++ ME+A L VPL+V + G W L
Sbjct: 820 ELILDVPEEELTAVKEILKQHMENAIPLRVPLVVDFKQGYNWEEL 864
>gi|389775724|ref|ZP_10193589.1| DNA polymerase I [Rhodanobacter spathiphylli B39]
gi|388436965|gb|EIL93791.1| DNA polymerase I [Rhodanobacter spathiphylli B39]
Length = 920
Score = 227 bits (578), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 166/514 (32%), Positives = 254/514 (49%), Gaps = 60/514 (11%)
Query: 1673 NLEKEVKKRLSSEAAAAANRSGRWKNQMR--RAAHNGCCRRVAQ----TRALCSVLW-KL 1725
+++ KK L E +G+ Q+ + + CR A+ T L LW KL
Sbjct: 450 DMDSLAKKYLGYETIKYEQVAGKGAKQISFSQVDLDTACRYAAEDADITLRLHHALWPKL 509
Query: 1726 LVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
L + +IEIPLV VLA+ME G+ +D + + L K++ L++++Y LAG
Sbjct: 510 ESVPSLRDVYRDIEIPLVPVLAEMERRGVLIDGDELRRQSQQLGKRMLELQQQSYALAGR 569
Query: 1786 KFSLYTAADIANVLYGHL----KLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEH 1841
+F+L + + VL+ L KL P G PST++ L+ + H + +I ++
Sbjct: 570 EFNLDSPKQLQAVLFDELGLEAKLKTPTGQ------PSTNEEALEAIAETHELPRLILDY 623
Query: 1842 RTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFK 1901
R LAKL + + + ++ + +H + Q S ATGR+S +PNLQ + E
Sbjct: 624 RGLAKLRSTYTDKLSGI----VNPRTGRVHTSYHQGSVATGRISSSDPNLQNIPVRTE-- 677
Query: 1902 MSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLS 1961
+ +I R FI + W ++AADYSQIELR+MAH S D GLL
Sbjct: 678 -------------EGRRI--RQAFI-APPGWKVMAADYSQIELRIMAHLSGDE---GLLR 718
Query: 1962 KPH--GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAK 2019
H GDV AA G + + + + +R K + +G++YGM L+ QL EA
Sbjct: 719 AFHSGGDVHRATAAEVFGVAPEEITTNQRRAAKAINFGLMYGMSAFGLARQLGVERGEAG 778
Query: 2020 EKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVN 2079
+ + + S +PGV +++ H+ GYVE++ GR+ +L + N + A+R AVN
Sbjct: 779 DYMGRYFSRYPGVRAFMDATREQAHRDGYVETIFGRRLYLENLNARNAGLRQGAERAAVN 838
Query: 2080 SICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDP 2139
+ QGSAADIIK AMI + A + + +L+QVHDELV EV
Sbjct: 839 APMQGSAADIIKRAMIAV----------------ATWLKDRDDAHMLMQVHDELVFEVRS 882
Query: 2140 SVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
I+E + V + M AA L VPLLV + VG+ W
Sbjct: 883 EAIEEVRAAVVERMSGAAALAVPLLVDVGVGANW 916
>gi|33152330|ref|NP_873683.1| DNA polymerase I [Haemophilus ducreyi 35000HP]
gi|33148553|gb|AAP96072.1| DNA polymerase I [Haemophilus ducreyi 35000HP]
Length = 962
Score = 227 bits (578), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 159/509 (31%), Positives = 260/509 (51%), Gaps = 49/509 (9%)
Query: 1673 NLEKEVKKRLSSEAAAAANRSGRWKNQMR--RAAHNGCCRRVAQTRALCSVLWKLLVSE- 1729
N+++ ++ L + A + +G+ KNQ+ + A A+ + L + L++
Sbjct: 491 NMDELAERYLDHKTIAFEDIAGKGKNQLTFDKIAIETATEYAAEDADITMKLHQQLITSL 550
Query: 1730 ----ELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGM 1785
LI+ IE+PLVNVLA +E G+ +D + L ++++L +E +T AG
Sbjct: 551 AKTPSLIKLFNEIEMPLVNVLARVEQNGVLIDSDKLLAQSKEMEQRLAEVEIAVHTAAGQ 610
Query: 1786 KFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVP-VIKEHRTL 1844
F+L + + +L+ L LP+ + KG PST++ L+ L + +VP ++ EHR L
Sbjct: 611 AFNLASTKQLQEILFEKLALPVLKKTPKGA--PSTNEEVLEQLAQQGHLVPKLLSEHRAL 668
Query: 1845 AKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSN 1904
+KL + + + I+ T + +H + Q T TGRLS +PNLQ + E
Sbjct: 669 SKLKSTYTDKLPKM--INQHTGR--VHTSYHQAVTTTGRLSSSDPNLQNIPIRTE----- 719
Query: 1905 EDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPH 1964
R FI +++ + ++AADYSQIELR+MAH + D +I +
Sbjct: 720 ------------AGRRIRQAFI-ARDGYKIVAADYSQIELRIMAHLANDEGMITAFANGQ 766
Query: 1965 GDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKS 2024
D+ AA G S V S++R K + +G++YGM L+ QL S +EAKE +
Sbjct: 767 -DIHQATAAEIFGLSLAEVTSEQRRSAKAINFGLIYGMSDFGLANQLAISRDEAKEYMAR 825
Query: 2025 FKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQG 2084
+ +P V ++ S KGYVE+L GR+ +L +IK N + A+R A+N+ QG
Sbjct: 826 YFQRYPNVQQFMRDIRESASVKGYVETLFGRRLYLPEIKSNNAIRRKAAERLAINAPMQG 885
Query: 2085 SAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKE 2144
+AADIIKIAMI+I D + A+ ++++QVHDEL+ EV I+
Sbjct: 886 TAADIIKIAMISI-----------DKQIRAD-----QNIKMIMQVHDELIFEVKQECIEY 929
Query: 2145 AVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
L++ ME A + VPL+ ++ VG+ W
Sbjct: 930 YTGLIKTEMEKAIAMKVPLIAEVGVGANW 958
>gi|288800530|ref|ZP_06405988.1| DNA polymerase type I [Prevotella sp. oral taxon 299 str. F0039]
gi|288332743|gb|EFC71223.1| DNA polymerase type I [Prevotella sp. oral taxon 299 str. F0039]
Length = 921
Score = 227 bits (578), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 167/587 (28%), Positives = 283/587 (48%), Gaps = 75/587 (12%)
Query: 1592 IMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLNLVGTSLGLENVGSSFLLLSPVHLKD 1651
+ E ++ K N+K I+VL++ ++++ G F
Sbjct: 401 LYENEEIEKVGQNIKYDIEVLRNYGITMK-----------------GPLF---------- 433
Query: 1652 GIDMCIVSWILWPDDERSSNPNLEKEVK-KRLSSEAAAAANRSGRWKNQMRRAAH----N 1706
D I ++L P+ + + E ++ K + + A G+ + MR A +
Sbjct: 434 --DTMIAHYLLQPELRHNMDDMAETYLRYKTIHIDQLIGA--KGKDQLNMRSLAPEQIVD 489
Query: 1707 GCCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARN 1766
C T L ++ L L +E+PL+ VLA+ME G+ +D++ +
Sbjct: 490 YACEDADITLQLKNIFEPKLKEAGLYPLFKEVEMPLIYVLAEMECNGVKLDVQALSEVSK 549
Query: 1767 LLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLD 1826
++L E+K Y LAG F++ + + +L+ LK+ K Q+ ++++
Sbjct: 550 TFNEQLSLYEQKIYELAGETFNISSPKQVGTILFEKLKVAEKPKKTKTGQYVTSEEELQK 609
Query: 1827 LLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSM 1886
L+ ++HPI+ I ++R L KLL+ + ++ L ++ + +H + Q +TATGRLS
Sbjct: 610 LI-NKHPIIDEILKYRGLKKLLSTYVDALPKL----VNPKTGNIHTSFNQATTATGRLSS 664
Query: 1887 EEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRL 1946
+PNLQ + + ED E+ C FIP+ E + +ADYSQIELR+
Sbjct: 665 SDPNLQNI------PVRGED----GKEIRKC-------FIPN-EGCLFFSADYSQIELRI 706
Query: 1947 MAHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNT 2006
MAH S D +I + H D+ AA+ + D V ER + KR +GI+YG+
Sbjct: 707 MAHLSGDENMIEAFIEGH-DIHAATAAKIYKKPIDEVTRDERTKAKRANFGIIYGITVFG 765
Query: 2007 LSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGN 2066
L+E+LN NEAK+ I+ + S+FP V +++ + Q GYVE+ R+R+L+ I N
Sbjct: 766 LAERLNIERNEAKQLIEGYFSTFPQVQAYMEQCKETAKQNGYVETFMHRRRYLADINSQN 825
Query: 2067 NKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLL 2126
+ A+R A+N+ QGSAADIIK+AM+ I+ F + +++
Sbjct: 826 ATVRGYAERNAINAPIQGSAADIIKLAMVRIYE---------------RFNNEGIKSKMI 870
Query: 2127 LQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
LQVHDEL V P+ ++ +V + M++A L VPL+ G+ W
Sbjct: 871 LQVHDELNFSVLPNEKEQVEKIVLEEMQNAFALKVPLIADAGWGANW 917
>gi|359457186|ref|ZP_09245749.1| DNA polymerase I [Acaryochloris sp. CCMEE 5410]
Length = 983
Score = 227 bits (578), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 150/457 (32%), Positives = 236/457 (51%), Gaps = 64/457 (14%)
Query: 1738 IEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIAN 1797
+E+PL VLA ME G+ +D + L+ L+ LE AY LAG F+L + ++
Sbjct: 566 VELPLEAVLAVMETSGVRIDQDYLQTLSTQLEADLQRLEAGAYELAGEIFNLGSPKQLSE 625
Query: 1798 VLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICS 1857
+L+G L+L + + K K STD L+ L+ +HPI+ V+ E+RTLAKL + + ++ +
Sbjct: 626 ILFGRLELDVKKSR-KTKLGYSTDAATLEKLQGDHPIIDVLLEYRTLAKLKSTYVDALPT 684
Query: 1858 LARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHC 1917
L R + +H + Q TATGRLS PNLQ + EF
Sbjct: 685 LVR----EDTHRIHTDFNQAVTATGRLSSSNPNLQNIPIRTEFSR--------------- 725
Query: 1918 KINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG 1977
R FIP + +WIL+AADYSQIELR++AH S++P L+ DV ++ A
Sbjct: 726 --QIRAAFIP-ESSWILMAADYSQIELRILAHLSQEPRLLDAYRNGQ-DVHSLTAQLLL- 780
Query: 1978 RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLH 2037
+D + ++ER K + +G++YGMGP+ + + EAK+ I+ F +P V ++L
Sbjct: 781 -EKDEIAAEERRLAKIINFGVIYGMGPHRFAREAGVKYGEAKDFIQRFYDRYPEVFAYLQ 839
Query: 2038 VAVSSCHQKGYVESLKGRKRF------------------LSKIKFGNNKEKSKAQ---RQ 2076
+GYVE++ GR+R+ L+++ + K S + R
Sbjct: 840 RMEREAVSQGYVETILGRRRYFEFDSRSLKKYRGKALEELAEVDLSDIKMSSYDRGLLRA 899
Query: 2077 AVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLE 2136
A N+ QGS+AD+IKIAM+ + + + +P S RLL+QVHDELVLE
Sbjct: 900 AANAPIQGSSADLIKIAMVQLQAAL-----EPYKS------------RLLMQVHDELVLE 942
Query: 2137 VDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
V + + S ++ ME+A L +PL+ ++ G+ W
Sbjct: 943 VPVDEVDDVRSQIKTTMETALPLSIPLVAEVHTGANW 979
>gi|118444648|ref|YP_877757.1| DNA polymerase I [Clostridium novyi NT]
gi|118135104|gb|ABK62148.1| DNA polymerase I, polA [Clostridium novyi NT]
Length = 878
Score = 227 bits (578), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 144/444 (32%), Positives = 228/444 (51%), Gaps = 47/444 (10%)
Query: 1733 EALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTA 1792
E L +E+PL+ VLA ME G VD + +K++ LEK+ + LA +F++ +
Sbjct: 475 ELLYTVELPLIEVLASMECEGFRVDENRLTEIGEKFKKEIETLEKEIHELADEEFNIKSP 534
Query: 1793 ADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTL 1852
+ +L+ L LP+ + K K ST+ L+ L+ HPI+ I E+R + KL + +
Sbjct: 535 KQLGKILFEKLDLPVIK---KTKTGYSTNAEVLEKLKDSHPIIEKIIEYRQITKLDSTYV 591
Query: 1853 GSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNA 1912
+ ++ + +H + QT T TGRLS EPNLQ + ++ +M E
Sbjct: 592 EGLKNVI-----DEDAKIHSSFNQTVTTTGRLSSTEPNLQNIP--IKHEMGRE------- 637
Query: 1913 EVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIA 1972
R F+P+ + ++ +ADYSQIELR+++H + D LI K H D+ T+ A
Sbjct: 638 --------IRKVFVPNNDESVIFSADYSQIELRILSHIADDEKLIDAF-KHHKDIHTITA 688
Query: 1973 ARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGV 2032
+ D V R K + +GI+YG+G +LS+ +N S EAKE I ++ S +P V
Sbjct: 689 SEVFKVPIDEVTPLMRSNAKAVNFGIVYGIGAFSLSKDINVSRKEAKEYIDTYFSRYPNV 748
Query: 2033 ASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKI 2092
++ +S G+V ++ RKR++ +I+ N + +R A+N+ QGSAADIIK+
Sbjct: 749 KKYIDEIISKAEVDGFVTTILNRKRYIPEIQSRNKIVRGFGERLAMNTPIQGSAADIIKL 808
Query: 2093 AMINIHSIIVGGVYKPDSSLAANFQMLKGR---CRLLLQVHDELVLEVDPSVIKEAVSLV 2149
AM+ + + LK R L+LQVHDEL+L V ++E +V
Sbjct: 809 AMVEV------------------YNELKNRNLKSTLILQVHDELILNVYKDELEEVKEMV 850
Query: 2150 QKCMESAALLLVPLLVKIQVGSTW 2173
ME+ LLVPL + VG TW
Sbjct: 851 VDKMENVMKLLVPLEADVNVGETW 874
>gi|452994782|emb|CCQ93602.1| DNA polymerase I [Clostridium ultunense Esp]
Length = 897
Score = 227 bits (578), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 247/504 (49%), Gaps = 54/504 (10%)
Query: 1684 SEAAAAANRSGRWKNQMRRAAHNGCCRRVAQTRAL-------CSVLWKL--LVSEELIE- 1733
+E A A + G + G R+ + + L SVLWK L+ EL E
Sbjct: 430 TEVAGIARKGGLHLPEDEEIYGKGAKWRLPEEQVLYKHAAEKASVLWKTHDLIIRELHEK 489
Query: 1734 ----ALLNIEIPLVNVLADMELWGIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSL 1789
L +E+PL VLA ME GI VD E L ++L K+ Y LAG +F++
Sbjct: 490 DLLSLYLQLELPLSRVLAKMEWIGIRVDRERLWSMGEELDQELEKTTKEIYRLAGTEFNI 549
Query: 1790 YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLN 1849
+ + +LY L LP K K STD L+ L+ H I+P++ +R L KL
Sbjct: 550 NSTKQLGEILYEKLGLP---PLKKTKTGYSTDADTLEKLQDYHEIIPILLHYRMLGKLKF 606
Query: 1850 CTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYG 1909
+ + + + +H + Q TATGRLS EPNLQ + VE
Sbjct: 607 TYIEGLMK----EIDERDGKIHTTFNQALTATGRLSSNEPNLQNIPIRVE---------- 652
Query: 1910 GNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFT 1969
+ +I R FIPS+ W +L++DYSQIELR++AH S+D LI K D+ T
Sbjct: 653 -----EGRRI--RQAFIPSEPGWKILSSDYSQIELRVLAHISQDENLIAAFQKGL-DIHT 704
Query: 1970 MIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSF 2029
A G E V + R Q K + +GI+YG+ LS+ LN S EA + I+ + S +
Sbjct: 705 ATAMEVFGVGEGEVTPRMRRQAKAVNFGIVYGISDYGLSQNLNISRKEAADFIERYFSVY 764
Query: 2030 PGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADI 2089
GV ++ V+ ++GYV +L R+R L +I N +S A+R A+N+ QG+AADI
Sbjct: 765 RGVKRYMEEIVAQARKQGYVTTLLNRRRELPEILDRNFNRRSFAERTAMNTPIQGTAADI 824
Query: 2090 IKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLV 2149
IK AMI L + + R R+LLQVHDELV EV +++ +V
Sbjct: 825 IKKAMI---------------LLDEEMKRQRVRSRMLLQVHDELVFEVPEEELEQMTEMV 869
Query: 2150 QKCMESAALLLVPLLVKIQVGSTW 2173
++ ME+A L VPL V I G TW
Sbjct: 870 RRIMENAMELSVPLRVDIHHGLTW 893
>gi|116754111|ref|YP_843229.1| ski2-like helicase [Methanosaeta thermophila PT]
gi|116665562|gb|ABK14589.1| DEAD/DEAH box helicase domain protein [Methanosaeta thermophila PT]
Length = 693
Score = 227 bits (578), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 205/770 (26%), Positives = 356/770 (46%), Gaps = 136/770 (17%)
Query: 504 DLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYCASTSAGKSFVAEILML 563
DL WLP + +Y+ GI +LYP Q E + G+L RN++ T+AGK+ +AE+ ML
Sbjct: 6 DLIRWLPESVIELYEALGIDELYPPQAEAIE-RGLLDGRNMIISVPTAAGKTLLAELAML 64
Query: 564 RRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGRHVRSYYGNQGGGSLPKD-----TS 618
R +S GK +L ++P ++ +EK E LG V G G +D
Sbjct: 65 RGALS-GKRSLYIVPLRALASEKFESFSRF-SKLGLRV----GISTGDFEKRDERLGRND 118
Query: 619 VAVCTIEKANSLVNRMLEEGRLSEIGIIVIDELHMVADQNRGYLLELLLTKLRYAAGEGT 678
+ + T EKA+SL+ R IG++V+DE+H++ NRG LE+ +TKL + E
Sbjct: 119 IIIATSEKADSLIRNGASWVR--RIGVLVVDEIHLLDSANRGPTLEMTMTKLMHLNPE-- 174
Query: 679 SDSSSGENSGTSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYETNFRPVPLEEYIK 738
+Q++G+SAT+ N +ADW++ + +++RPV L E +
Sbjct: 175 ---------------------MQVIGLSATIANGREIADWIKGEIVSSDWRPVRLREGVL 213
Query: 739 VGNAIYSKKMDVVRTILTAANLGGKDPDHIVELCDEVVQEGHSVLIFCSSRKGCESTARH 798
+ + + ++ L ++ D ++ L + V +G +LIF S+R+ ES A+
Sbjct: 214 LEDRLVFPDGEI--------QLENRNRDPVLNLVLDTVDQGGQMLIFESTRRNAESMAKK 265
Query: 799 VSKFLKKFSINVHSSDSEFIDITSAIDALRRCPAGLDPVLEETLPSGVAYHHAGLTVEER 858
VS L++ E I++ + + L L G A+HHAGL E+R
Sbjct: 266 VSGALQE--------SGETIELAERLSGEGKTAKKLAMCLRH----GAAFHHAGLLPEQR 313
Query: 859 EVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPR-----IGRDFIDGTRYRQMAGR 913
++E +R+ +V+V+ T TLAAG+NLPARRV+ R + +G I YRQMAGR
Sbjct: 314 RLIELGFRQNVVKVIACTPTLAAGLNLPARRVLIRSYKRYEAGLGTRPIPVMEYRQMAGR 373
Query: 914 AGRTGIDTKGESMLICKPE-EVKKIMGLLNESCPP-LHSCLSEDKNGMTHAILEVVAGGI 971
AGR G+D GES+++ + E E++K+M P + S L+ ++ TH +L +A
Sbjct: 374 AGRPGLDPYGESLIMARSESELQKLMDHYVMGEPEDIWSKLASERALRTH-VLATIASRF 432
Query: 972 VQTAEDIHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGRAA 1031
+ + + R + T + + ++ L +L ++ K + TPLG
Sbjct: 433 ADSVDSLSRLMASTFYARQQDPSYLGETIASVLEFLVRSDMID-----KDLTPTPLGALV 487
Query: 1032 FGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELYY----ERFLE 1087
+ P +++++ ++ R VL + LH++ ++ PD EL + + +LE
Sbjct: 488 SRLYIDPLSAMVMIQEIRGIRRPTVL-TLLHVITMT--------PDMELLFVQQSDNWLE 538
Query: 1088 --LSALDQSVGNQVGVSEPYLMRMAHGAPMRISSKLRDSTKGLH-GKLEYRLGITSNNML 1144
+S +GN+ +L+R ++ +S L D +H ++E R I+ +++
Sbjct: 539 DFISEHSSELGNEKNFD--WLLR-----EVKTASMLMDWINEVHEDRIEDRYSISPGDLV 591
Query: 1145 SDAQTLRVCKRFYVALILSRLVQETPVLEVCETFKVARGMVQALQENAGRFASMVSVFCE 1204
A+T A ++ AL + V+ E
Sbjct: 592 RIAET-------------------------------AEWLMSALHRISKHMDLGVTYLAE 620
Query: 1205 RLGWYDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRT 1254
RL R+ +G E+++L + + RAR LY+AG R+
Sbjct: 621 RLAL------------RIHYGAGDELLQLLELKGIGRVRARKLYQAGYRS 658
>gi|449999554|ref|ZP_21824565.1| DNA polymerase I [Streptococcus mutans N29]
gi|449186936|gb|EMB88742.1| DNA polymerase I [Streptococcus mutans N29]
Length = 878
Score = 227 bits (578), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 241/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEE----------LIEALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE ++ L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPMRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|386580284|ref|YP_006076689.1| DNA polymerase I [Streptococcus suis JS14]
gi|319758476|gb|ADV70418.1| DNA polymerase I [Streptococcus suis JS14]
Length = 878
Score = 227 bits (578), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 247/460 (53%), Gaps = 53/460 (11%)
Query: 1721 VLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEG--CLQARNLLQKKLRYLEKK 1778
+L KL +++L + L ++E+PL NVLA ME+ GI V+ E +Q+ N + + L K+
Sbjct: 461 MLTKLEENQQL-DLLFDMELPLANVLAKMEIAGIKVEAETLKAMQSEN--EVLIDQLTKE 517
Query: 1779 AYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIVPVI 1838
Y LAG +F++ + + +L+ + LP+ E K K ST +D+L PI PV+
Sbjct: 518 IYELAGQEFNINSPKQLGIILFEEMGLPL-EYTKKTKTGYST---AVDVLERLAPIAPVV 573
Query: 1839 K---EHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVE 1895
E+R + KL + + L + K +H ++Q T TGRLS +PNLQ +
Sbjct: 574 SKILEYRQITKLQST---YVVGLQDAILEDGK--IHTRYVQDLTQTGRLSSTDPNLQNIP 628
Query: 1896 HMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLMAHFSKDPA 1955
++ ++ R F+PS EN +LLA+DYSQIELR++AH S+D
Sbjct: 629 ----------------VRLEQGRL-IRKAFVPSLENSVLLASDYSQIELRVLAHISQDKH 671
Query: 1956 LIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQTKRLIYGILYGMGPNTLSEQLNC 2013
LI + D+ T A R G ++ED V +R K + +G++YG+ LS L
Sbjct: 672 LIEAFQQ-GADIHTSTAMRVFGIEKAED-VTPNDRRNAKAVNFGVVYGISDFGLSNNLGI 729
Query: 2014 SSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNNKEKSKA 2073
+ EAK I ++ FPG+ +++ V KGYVE++ R+R L I N ++ A
Sbjct: 730 TRKEAKAYIDTYFERFPGIKNYMETIVREARDKGYVETIYKRRRELPDINSRNFNVRNFA 789
Query: 2074 QRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLLQVHDEL 2133
+R A+NS QGSAADI+K+AMIN+ + ++ LA R+LLQVHDE+
Sbjct: 790 ERTAINSPIQGSAADILKVAMINLDKALT------EAGLA---------TRMLLQVHDEI 834
Query: 2134 VLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTW 2173
VLEV + ++ ++V++ MESA L VPL+V G TW
Sbjct: 835 VLEVPVAELETVKAMVKETMESAISLSVPLIVDENEGPTW 874
>gi|450064388|ref|ZP_21845362.1| DNA polymerase I [Streptococcus mutans NLML5]
gi|449203798|gb|EMC04644.1| DNA polymerase I [Streptococcus mutans NLML5]
Length = 878
Score = 227 bits (578), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 241/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEE----------LIEALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE ++ L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPMRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|450089444|ref|ZP_21855184.1| DNA polymerase I [Streptococcus mutans NV1996]
gi|449215498|gb|EMC15686.1| DNA polymerase I [Streptococcus mutans NV1996]
Length = 878
Score = 227 bits (578), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 241/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEE----------LIEALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE ++ L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPMRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERTNEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|397649035|ref|YP_006489562.1| DNA polymerase I [Streptococcus mutans GS-5]
gi|392602604|gb|AFM80768.1| DNA polymerase I [Streptococcus mutans GS-5]
Length = 878
Score = 227 bits (578), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 241/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEE----------LIEALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE ++ L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPMRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|450128385|ref|ZP_21868953.1| DNA polymerase I [Streptococcus mutans U2A]
gi|449229663|gb|EMC28966.1| DNA polymerase I [Streptococcus mutans U2A]
Length = 878
Score = 227 bits (578), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 241/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEE----------LIEALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE ++ L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPMRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERTNEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|449994587|ref|ZP_21822609.1| DNA polymerase I [Streptococcus mutans A9]
gi|449185198|gb|EMB87096.1| DNA polymerase I [Streptococcus mutans A9]
Length = 878
Score = 227 bits (578), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 241/483 (49%), Gaps = 56/483 (11%)
Query: 1707 GCCRRVAQTRALCSVLWK----LLVSEE----------LIEALLNIEIPLVNVLADMELW 1752
G R + + L S L K LL SEE ++ L +E+PL NVLA ME+
Sbjct: 432 GAKRAIPEKNVLLSHLAKKISVLLASEEPMRQKLSANDQLDLLFEMELPLANVLAKMEIA 491
Query: 1753 GIGVDMEGCLQARNLLQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHN 1812
GI V E + +L+ L ++ Y LAG F++ + + +L+ L LP+
Sbjct: 492 GISVRKETLQDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPL-SATK 550
Query: 1813 KGKQHPSTDKHCLDLLRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHG 1872
K K ST L+ L H PIV I E+R +AKL + + I IS + +H
Sbjct: 551 KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYI--IGLQDSISFDGK---IHT 605
Query: 1873 HWLQTSTATGRLSMEEPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENW 1932
+LQ T TGRLS +PNLQ + ++ ++ R F+P +
Sbjct: 606 RYLQDLTQTGRLSSVDPNLQNIP----------------VRLEQGRL-IRKAFVPEWKES 648
Query: 1933 ILLAADYSQIELRLMAHFSKDPALIGLLSKPHGDVFTMIAARWTG--RSEDSVGSQERDQ 1990
+LL++DYSQIELR++AH S D LI K D+ T A R G R ED V +R
Sbjct: 649 VLLSSDYSQIELRVLAHISGDEHLIAAF-KEGADIHTSTAMRVFGIERPED-VTPNDRRN 706
Query: 1991 TKRLIYGILYGMGPNTLSEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVE 2050
K + +G++YG+ L+ L S AK I+++ +PG+ +++ V KGYVE
Sbjct: 707 AKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKNYMDRVVREARDKGYVE 766
Query: 2051 SLKGRKRFLSKIKFGNNKEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDS 2110
+L R+R L I N +S A+R A+NS QGSAADI+K+AMI++ + G Y+
Sbjct: 767 TLFHRRRELPDINSRNFNIRSFAERTAINSPIQGSAADILKVAMIHLDQALKKGDYQ--- 823
Query: 2111 SLAANFQMLKGRCRLLLQVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVG 2170
R+LLQVHDE+VLEV + ++ LV++ MESA L VPL+ G
Sbjct: 824 ------------SRMLLQVHDEIVLEVPNAELEAIQKLVKETMESAIELSVPLVADENAG 871
Query: 2171 STW 2173
TW
Sbjct: 872 QTW 874
>gi|73749074|ref|YP_308313.1| DNA-directed DNA polymerase I [Dehalococcoides sp. CBDB1]
gi|452205555|ref|YP_007485684.1| DNA polymerase I [Dehalococcoides mccartyi BTF08]
gi|73660790|emb|CAI83397.1| DNA-directed DNA polymerase I [Dehalococcoides sp. CBDB1]
gi|452112611|gb|AGG08342.1| DNA polymerase I [Dehalococcoides mccartyi BTF08]
Length = 903
Score = 227 bits (578), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 183/590 (31%), Positives = 283/590 (47%), Gaps = 80/590 (13%)
Query: 1592 IMEKRDVRKFTWNMKVQIQVLKHAAVSIQRFGGLN----LVGTSLGLENVGSSFLLLSPV 1647
++ +++ K N K + +L A IQ GL+ L LG +N+G L+
Sbjct: 390 LLTNKNITKTAHNAKYLMNLLASAGQEIQ---GLDFDTMLSAHLLGEKNLGIKDLVFE-- 444
Query: 1648 HLKDGIDMCIVSWILWPDDERSSNPNLEKEVKKRLSSEAAAAANRSGRWKNQMRRAAHNG 1707
H G+++ V IL + ++ S E LS A A+ + R K
Sbjct: 445 HF--GVEIADVENILTQNGKKKSFSASE------LSEAAQLVADYTFRLKGLF------- 489
Query: 1708 CCRRVAQTRALCSVLWKLLVSEELIEALLNIEIPLVNVLADMELWGIGVDMEGCLQARNL 1767
++A+T+ LI+ +N+E+PLV +L ME GI +D +
Sbjct: 490 -AAQLAETK--------------LIDLFVNVEMPLVPILLGMERSGIMLDTDLLKGMAEK 534
Query: 1768 LQKKLRYLEKKAYTLAGMKFSLYTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDL 1827
+ ++ LE+ Y AG F++ + + +L+ LKLP+ + K K ST LD
Sbjct: 535 VGGQIFKLEEAIYAQAGHSFNIGSPQQLGRILFDELKLPVIK---KTKTGYSTGAEVLDE 591
Query: 1828 LRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARISMSTQKYTLHGHWLQTSTATGRLSME 1887
L+ EH IV +I E+R L KL + L ++ + ++ T++ LH + QT TATGRLS
Sbjct: 592 LKGEHRIVDLILEYRMLVKLKSTYLDTLPRM--VNPHTRR--LHTSFNQTRTATGRLSSS 647
Query: 1888 EPNLQCVEHMVEFKMSNEDIYGGNAEVDHCKINARDFFIPSQENWILLAADYSQIELRLM 1947
EPNLQ + V +M E R F P + ++LA DYSQI+LR++
Sbjct: 648 EPNLQNIP--VRGEMGRE--------------IRRAFIAP--KGTVMLAGDYSQIDLRVL 689
Query: 1948 AHFSKDPALIGLLSKPHGDVFTMIAARWTGRSEDSVGSQERDQTKRLIYGILYGMGPNTL 2007
AH S DPALI K D+ T AAR V ++R K + +G++YGM L
Sbjct: 690 AHLSGDPALIEAFLKDQ-DIHTATAARLLNILPSEVTKEQRRLAKTVNFGVIYGMSSYGL 748
Query: 2008 SEQLNCSSNEAKEKIKSFKSSFPGVASWLHVAVSSCHQKGYVESLKGRKRFLSKIKFGNN 2067
+ S EA + IK++ +P VA + GYVE+L GR+R++ +I N
Sbjct: 749 EQATELSLAEADKFIKAYFEKYPRVAIYFAEIKHQARTNGYVETLLGRRRYIPEINSPNR 808
Query: 2068 KEKSKAQRQAVNSICQGSAADIIKIAMINIHSIIVGGVYKPDSSLAANFQMLKGRCRLLL 2127
+ A+R A+N QG++ADIIK+AM+ + D L K RLLL
Sbjct: 809 ILRESAERMAINMPVQGTSADIIKLAMVRL-----------DEKLKEE----KLESRLLL 853
Query: 2128 QVHDELVLEVDPSVIKEAVSLVQKCMESAALLLVPLLVKIQVGSTWGSLE 2177
QVHDEL+ EV + +K +L+ + M A +PL V+++ G+ WG +E
Sbjct: 854 QVHDELIFEVPDAELKRMSALLMETMSGAVTFEIPLKVELKSGANWGDME 903
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,249,087,029
Number of Sequences: 23463169
Number of extensions: 1394991768
Number of successful extensions: 3806272
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9469
Number of HSP's successfully gapped in prelim test: 2991
Number of HSP's that attempted gapping in prelim test: 3742619
Number of HSP's gapped (non-prelim): 26146
length of query: 2191
length of database: 8,064,228,071
effective HSP length: 159
effective length of query: 2032
effective length of database: 8,628,551,496
effective search space: 17533216639872
effective search space used: 17533216639872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 86 (37.7 bits)