Query         000120
Match_columns 2151
No_of_seqs    241 out of 314
Neff          6.2 
Searched_HMMs 13730
Date          Mon Mar 25 17:37:52 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000120.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/000120hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2bpta1 a.118.1.1 (A:1-861) Im  60.5 1.8E+02   0.013   34.8  30.0  230 1557-1797  243-482 (861)
  2 d2vglb_ a.118.1.10 (B:) Adapti  43.0   3E+02   0.022   32.3  19.9   87 1106-1195   97-187 (579)
  3 d1b3ua_ a.118.1.2 (A:) Constan  37.9 2.5E+02   0.018   32.4  17.8   83 1110-1193  221-309 (588)
  4 d1q1sc_ a.118.1.1 (C:) Importi  32.3 3.2E+02   0.023   29.7  16.7  218 1772-2046   17-258 (434)
  5 d2vglb_ a.118.1.10 (B:) Adapti  19.8 6.7E+02   0.049   28.9  18.8  108 1930-2043  337-446 (579)
  6 d1xqra1 a.118.1.21 (A:87-350)   18.1      93  0.0068   32.7   7.6   84 1110-1193  120-214 (264)
  7 d1qbkb_ a.118.1.1 (B:) Karyoph  11.3 1.2E+03   0.086   27.7  23.0   89 1720-1811  474-564 (888)
  8 d1b3ua_ a.118.1.2 (A:) Constan   9.0 2.5E+02   0.018   32.3   8.4   81 1109-1193  458-547 (588)
  9 d1xqra1 a.118.1.21 (A:87-350)    8.8   8E+02   0.058   24.7  11.8  119 1926-2047   77-215 (264)
 10 d1te4a_ a.118.1.16 (A:) MTH187   8.7 1.2E+02  0.0087   27.3   4.1   33  819-851    25-58  (111)

No 1  
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.49  E-value=1.8e+02  Score=34.85  Aligned_cols=230  Identities=9%  Similarity=-0.010  Sum_probs=104.2

Q ss_pred             HHHHHHHHhhccchhhhhhhhhHHHHHH-hhcccCCchhHHHHHHHHHHHHHHHHHccccccccc----cCCCChhhHHH
Q 000120         1557 IALILLAEIAYENDEDFREHLPLLFHVT-FVSMDSSEDIVLEHCQHLLVNLLYSLAGRHLELYEV----ENSDGENKQQV 1631 (2151)
Q Consensus      1557 lalifL~dl~~~~~~d~~~~LP~LLH~v-~ll~Dh~~~~Vre~~~~LLvnLih~L~~~~l~l~~~----~~~~~~~~~~v 1631 (2151)
                      -++-.+.+++-.....+..|++.+++.+ .....+..+.++.++-+++.++..............    ..........+
T Consensus       243 ~~~~~l~~i~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  322 (861)
T d2bpta1         243 AAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSI  322 (861)
T ss_dssp             HHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence            3445566666555566677888777654 455788889999998888776654332110000000    00011122233


Q ss_pred             HHHHHHHHhc-CCCCCCCCCCcccccCCCCcHHHHHHHHHHHHHhhccCcchHHHHHHHHHHHHhhcCCccchhHHHHHH
Q 000120         1632 VSLIKYVQSK-RGSMMWENEDPTVVRTELPSAALLSALVQSMVDAIFFQGDLRETWGAEALKWAMECTSRHLACRSHQIY 1710 (2151)
Q Consensus      1632 ~~li~~l~~~-~~~~~W~~ed~~~~~~~~~s~~~L~~~v~~i~e~~~~~~~l~~~W~~~AL~wAtsc~~RhlA~RSfQVf 1710 (2151)
                      ..++..+..- ....-+..++.    +..  .......+..+.... ...-+..-+.  ........+....---++..+
T Consensus       323 ~~i~~~l~~~l~~~~~~~~~~~----~~~--~~~~~~~l~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~l  393 (861)
T d2bpta1         323 KDVVPNLLNLLTRQNEDPEDDD----WNV--SMSAGACLQLFAQNC-GNHILEPVLE--FVEQNITADNWRNREAAVMAF  393 (861)
T ss_dssp             HHHHHHHHHHTTCCCCC-CCCC----CHH--HHHHHHHHHHHHHHH-GGGGHHHHHH--HHHHHTTCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccccchh----HHH--HHHHHHHHHHHHhhc-chhhhhhhcc--hhhhhhhhHHHHHHHHHHHHH
Confidence            3333332211 11111111111    100  001111122222211 1111111111  112222223333333345566


Q ss_pred             hhcCCCCChHH----HHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHhccCCCcccchhhHHHHHHhhccCCcHHHHH
Q 000120         1711 RALRPSVTSDT----CVLLLRCLHRCLGNPIPPVLGFIMEILMTLQVMVENMEPEKVILYPQLFWGCVAMMHTDFVHVYC 1786 (2151)
Q Consensus      1711 r~L~~~vd~~~----l~~lL~rL~~tis~~~~d~q~f~~eIL~TL~~iv~~L~~~~~~~~pQLFW~avA~L~s~~e~eF~ 1786 (2151)
                      +++....+...    +.+++..+.+.+.++++.++.-+...+..+...+....... ..++.++......+.. +...-.
T Consensus       394 ~~i~~~~~~~~~~~~l~~~l~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~-~~~~~ll~~l~~~~~~-~~~~~~  471 (861)
T d2bpta1         394 GSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQ-QHLPGVVQACLIGLQD-HPKVAT  471 (861)
T ss_dssp             HHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTT-TTHHHHHHHHHHHHTS-CHHHHH
T ss_pred             HHHHhhcchhhHHHHHHHHHHHHHHHhcCcchhhhhHHHHHHHHHHHHhchhhhhH-HhhhhhhHHHHhcccc-ChHHHH
Confidence            77776665544    45677788888888877776655555544444443322222 3578888776666544 333344


Q ss_pred             HHHHHHHHHhh
Q 000120         1787 QVLELFSRVID 1797 (2151)
Q Consensus      1787 ~al~LL~~~L~ 1797 (2151)
                      .+...+..++.
T Consensus       472 ~~~~~~~~l~~  482 (861)
T d2bpta1         472 NCSWTIINLVE  482 (861)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            44444444443


No 2  
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.05  E-value=3e+02  Score=32.32  Aligned_cols=87  Identities=15%  Similarity=0.091  Sum_probs=56.8

Q ss_pred             cchhHHHHHHHHHHHHhCcchHH---HHHHHhhcC-CccchhhHHHHHHHHHhhcCCCCCchHHHHHHHHHhccCCChhH
Q 000120         1106 HHRVALAKLALKNLLLTNLDLFP---ACIDQCYYS-DAAIADGYFSVLAEVYMRQEIPKCEIQRLLSLILYKVVDPSRQI 1181 (2151)
Q Consensus      1106 ~~~~~lgr~AL~~LL~~N~dLl~---~~i~rCY~~-~~~va~~yF~vl~~v~~~~~~~~~~~~~LL~L~L~~lg~~~~~I 1181 (2151)
                      |..+.+|-++|-++  .++++.+   ..|.+|... ++.|...--.+++.++...+.. ++...++....-.+.|+++.|
T Consensus        97 ~~iR~lALr~L~~i--~~~~i~~~l~~~l~~~L~D~~p~VRk~Aa~~l~kl~~~~p~~-~~~~~~~~~L~~lL~D~n~~V  173 (579)
T d2vglb_          97 PLIRALAVRTMGCI--RVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQM-VEDQGFLDSLRDLIADSNPMV  173 (579)
T ss_dssp             HHHHHHHHHHHHTC--CSGGGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCC-HHHHHHHHHHHHTTSCSCHHH
T ss_pred             HHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhccChhh-hhhhhHHHHHHHHHcCCChHH
Confidence            44456666666554  4566544   344567664 4556555555777777554442 444556666667788999999


Q ss_pred             HHHHHHHHHHHhhh
Q 000120         1182 RDDALQMLETLSVR 1195 (2151)
Q Consensus      1182 R~~A~~LL~~L~~r 1195 (2151)
                      +..|...|..+.+.
T Consensus       174 ~~~Al~~L~~I~~~  187 (579)
T d2vglb_         174 VANAVAALSEISES  187 (579)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999988654


No 3  
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.90  E-value=2.5e+02  Score=32.41  Aligned_cols=83  Identities=13%  Similarity=0.001  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHhCcc-----hHHHHHHHhhc-CCccchhhHHHHHHHHHhhcCCCCCchHHHHHHHHHhccCCChhHHH
Q 000120         1110 ALAKLALKNLLLTNLD-----LFPACIDQCYY-SDAAIADGYFSVLAEVYMRQEIPKCEIQRLLSLILYKVVDPSRQIRD 1183 (2151)
Q Consensus      1110 ~lgr~AL~~LL~~N~d-----Ll~~~i~rCY~-~~~~va~~yF~vl~~v~~~~~~~~~~~~~LL~L~L~~lg~~~~~IR~ 1183 (2151)
                      ..+-+++..+....++     .+-..+.+... .+..|......++.++....... .....++.+..--+.|++.++|.
T Consensus       221 ~~a~~~l~~i~~~~~~~~~~~~i~~~l~~~~~D~~~~Vr~~~~~~l~~l~~~~~~~-~~~~~l~~~l~~ll~d~~~~vr~  299 (588)
T d1b3ua_         221 LLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPE-ITKTDLVPAFQNLMKDCEAEVRA  299 (588)
T ss_dssp             TTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHHCHH-HHHHTHHHHHHHHHTCSSHHHHH
T ss_pred             HHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhhhh-hhhhhhhHHHHHHHhccchHHHH
Confidence            4677888888876542     12223334333 23344444444444433211110 11223555555667799999999


Q ss_pred             HHHHHHHHHh
Q 000120         1184 DALQMLETLS 1193 (2151)
Q Consensus      1184 ~A~~LL~~L~ 1193 (2151)
                      .|..-|..+.
T Consensus       300 ~a~~~l~~~~  309 (588)
T d1b3ua_         300 AASHKVKEFC  309 (588)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999888764


No 4  
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.32  E-value=3.2e+02  Score=29.73  Aligned_cols=218  Identities=13%  Similarity=0.090  Sum_probs=112.2

Q ss_pred             HHHhhccCCcHHHHHHHHHHHHHHhhhcCCCChhhHHHHhhcCCCCCcccCCCCCcccccccCCCCCCCCCCCCCCCcch
Q 000120         1772 GCVAMMHTDFVHVYCQVLELFSRVIDRLSFRDRTTENVLLSSMPRDELDTDGDTGDFQRTESRGYELPPTSGTLPKFEGV 1851 (2151)
Q Consensus      1772 ~avA~L~s~~e~eF~~al~LL~~~L~~ld~~d~~~~~~Ll~~~P~~~~~~~~~~~~l~~l~~~G~~~~~~~~~~~~F~gL 1851 (2151)
                      -.+..|+++.+.+=..|+..|.++++.-+  ++.... +..                                    .|+
T Consensus        17 ~lv~~l~s~~~~~~~~a~~~l~~l~s~~~--~~~~~~-i~~------------------------------------~g~   57 (434)
T d1q1sc_          17 DIVKGINSNNLESQLQATQAARKLLSREK--QPPIDN-IIR------------------------------------AGL   57 (434)
T ss_dssp             HHHHHHTSSCHHHHHHHHHHHHHHHHSSS--CCCHHH-HHH------------------------------------TTC
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHhcCCC--CchHHH-HHH------------------------------------CCC
Confidence            35678888888888899988887765321  111111 111                                    267


Q ss_pred             HHHHhhccCCCCChh---HHHHHHHHhhccCCCccccCCchhHHHHHHHHhhHHHHhhccCCCCCCCCchhHHHHHHHHH
Q 000120         1852 QPLVLKGLMSTVSHG---VSIEVLSQITVHSCDSIFGDAETRLLMHITGLLPWLCLQLGKDAVVGPASPLQQQYQKACSV 1928 (2151)
Q Consensus      1852 q~lllKGLrss~t~~---~Tl~~L~~L~~~~~~~lig~~~~rll~~~lalLP~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1928 (2151)
                      .+.+++-|.++...+   .+...|..++...       ++.+-.+.-...+|.++..+..+.      +   ..  ...+
T Consensus        58 i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~-------~~~~~~i~~~~~i~~l~~~L~~~~------~---~~--~~~a  119 (434)
T d1q1sc_          58 IPKFVSFLGKTDCSPIQFESAWALTNIASGT-------SEQTKAVVDGGAIPAFISLLASPH------A---HI--SEQA  119 (434)
T ss_dssp             HHHHHHHTTCGGGHHHHHHHHHHHHHHHTSC-------HHHHHHHHHTTHHHHHHHHTTCSC------H---HH--HHHH
T ss_pred             HHHHHHHHccCCCHHHHHHHHHHHHHHhcCC-------hhhhhHhhhccchhhhhhccccCC------H---HH--HHHH
Confidence            888888887665543   3445555554221       122222222345777666654221      1   11  1223


Q ss_pred             HHHHHHHHHhC--------CCChHHHHHHHHhcccccc-hhhHHHhHHHhhhhhcc-----cc--cchHHHHHHHHHHhc
Q 000120         1929 ASNIALWCRAK--------SLDELGTVFVAYSRGEIKS-IDNLLACVSPLLWNEWF-----PK--HSALAFGHLLRLLEK 1992 (2151)
Q Consensus      1929 A~~la~~~~~~--------~~~~La~vl~~ya~~~f~~-~~dfl~~~~~~l~~~~f-----p~--~~~~~l~~L~~lL~~ 1992 (2151)
                      +..|..+|...        ....+..++..+....... ....++.+...+.....     +.  ....++..|..+|..
T Consensus       120 ~~~L~nl~~~~~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l~~ll~~  199 (434)
T d1q1sc_         120 VWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH  199 (434)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHTCCCTTCCCHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhccchHHHHHHHHhhhhhHHHHHHHhcccccchHHHHHHHHHHHHHHhhcccccchhhhhhhHHHHHHHHHhc
Confidence            34455555321        2333444444444433332 23344444333332221     11  223456678888887


Q ss_pred             CChHHHHHHHHHHHHhhcCCCCCC--CCchhhHHHHHHHhcCcCH---HHHHHHHHHHH
Q 000120         1993 GPVEYQRVILLMLKALLQHTPMDA--SQSPHMYAIVSQLVESTLC---WEALSVLEALL 2046 (2151)
Q Consensus      1993 ~~~~~~~~~l~iL~~ll~~~~~~~--~~~~~l~~~l~rll~t~~~---~eAL~VL~~v~ 2046 (2151)
                      +....+...+..|+.+..+.+-..  ...+.++..+.++++.+..   ..|+.+|.++.
T Consensus       200 ~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~  258 (434)
T d1q1sc_         200 NDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIV  258 (434)
T ss_dssp             SCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHT
T ss_pred             cccchhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchhhhhhchhhhhhhHH
Confidence            777777777888888765532210  1112355667777777654   45566665553


No 5  
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.83  E-value=6.7e+02  Score=28.93  Aligned_cols=108  Identities=7%  Similarity=0.061  Sum_probs=64.1

Q ss_pred             HHHHHHHHhCCCChHHHHHHHHhcccccchhhHHHhHHHhhhh--hcccccchHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 000120         1930 SNIALWCRAKSLDELGTVFVAYSRGEIKSIDNLLACVSPLLWN--EWFPKHSALAFGHLLRLLEKGPVEYQRVILLMLKA 2007 (2151)
Q Consensus      1930 ~~la~~~~~~~~~~La~vl~~ya~~~f~~~~dfl~~~~~~l~~--~~fp~~~~~~l~~L~~lL~~~~~~~~~~~l~iL~~ 2007 (2151)
                      +.|..+|.+.+...+-.-+..|++   ....||.+.++..|..  .-+|.....++..|+.+++.+.....+.+...++-
T Consensus       337 ~iL~~l~~~~n~~~Il~eL~~y~~---~~d~~~~~~ai~aI~~la~~~~~~~~~~i~~Ll~ll~~~~~~v~~e~i~~i~~  413 (579)
T d2vglb_         337 DIMIRLASQANIAQVLAELKEYAT---EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRD  413 (579)
T ss_dssp             HHHHHTCCSSTHHHHHHHHHHHTT---SSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcChhhHHHHHHHHHHHhh---cCCHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence            345566654443333333444442   2346888888777764  33566666788899999988766666777777777


Q ss_pred             hhcCCCCCCCCchhhHHHHHHHhcCcCHHHHHHHHH
Q 000120         2008 LLQHTPMDASQSPHMYAIVSQLVESTLCWEALSVLE 2043 (2151)
Q Consensus      2008 ll~~~~~~~~~~~~l~~~l~rll~t~~~~eAL~VL~ 2043 (2151)
                      ++...|-.   ....+..+.+.++.---++|....=
T Consensus       414 i~~~~p~~---~~~ii~~L~~~l~~~~~~~~~~~~i  446 (579)
T d2vglb_         414 IFRKYPNK---YESIIATLCENLDSLDEPDARAAMI  446 (579)
T ss_dssp             HHHHSCSS---CCTTHHHHHHTTTTCCSHHHHHHHH
T ss_pred             HHHhChHH---HHHHHHHHHHHHHhcCcHHHHHHHH
Confidence            77554321   2334555556565544555554443


No 6  
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.07  E-value=93  Score=32.75  Aligned_cols=84  Identities=12%  Similarity=0.062  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHhCcc---------hHHHHHHHhhcCCccchhhHHHHHHHHHhhcCCCCCchH--HHHHHHHHhccCCC
Q 000120         1110 ALAKLALKNLLLTNLD---------LFPACIDQCYYSDAAIADGYFSVLAEVYMRQEIPKCEIQ--RLLSLILYKVVDPS 1178 (2151)
Q Consensus      1110 ~lgr~AL~~LL~~N~d---------Ll~~~i~rCY~~~~~va~~yF~vl~~v~~~~~~~~~~~~--~LL~L~L~~lg~~~ 1178 (2151)
                      .-+-.||.++..+|++         .+...++-..+.+..+....-.+|..++...+...-.+.  ..+....-.+.+++
T Consensus       120 ~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~lL~~~~  199 (264)
T d1xqra1         120 VKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEH  199 (264)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhccHHHHHHHHHhhhHHHHHHHHcCCC
Confidence            4567888898888764         244555555555555544444556665544332110011  12222233346778


Q ss_pred             hhHHHHHHHHHHHHh
Q 000120         1179 RQIRDDALQMLETLS 1193 (2151)
Q Consensus      1179 ~~IR~~A~~LL~~L~ 1193 (2151)
                      .++|+.|...|..|.
T Consensus       200 ~~~~~~a~~aL~~L~  214 (264)
T d1xqra1         200 SPFHEHVLGALCSLV  214 (264)
T ss_dssp             STHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            889999988888774


No 7  
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.35  E-value=1.2e+03  Score=27.72  Aligned_cols=89  Identities=12%  Similarity=0.020  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHhccCCCcccchhhHHHHHHhhccCCcHHHHHHHHHHHHHHhhhc
Q 000120         1720 DTCVLLLRCLHRCLGNPIPPVLGFIMEILMTLQVMVENMEPEKVILYPQLFWGCVAMMHTDFVHVYCQVLELFSRVIDRL 1799 (2151)
Q Consensus      1720 ~~l~~lL~rL~~tis~~~~d~q~f~~eIL~TL~~iv~~L~~~~~~~~pQLFW~avA~L~s~~e~eF~~al~LL~~~L~~l 1799 (2151)
                      ..+..++..|-+.+.|+++.++.-+...|.++   ++...++-.-++++++-.-+.+++.........+++.+..+.+.+
T Consensus       474 ~~~~~~l~~ll~~l~d~~~~V~~~a~~al~~l---~~~~~~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~al~~l~~~~  550 (888)
T d1qbkb_         474 TYLKPLMTELLKRILDSNKRVQEAACSAFATL---EEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSV  550 (888)
T ss_dssp             HHTTTHHHHHHHHHSSSCHHHHHHHHHHHHHH---HHHHTTSSGGGHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHhcCCCHHHHHHHHHHHHHH---HHHhhhhhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhh
Confidence            34555666666677777777777666655444   444444444568999999999998876666666666666666655


Q ss_pred             C--CCChhhHHHHh
Q 000120         1800 S--FRDRTTENVLL 1811 (2151)
Q Consensus      1800 d--~~d~~~~~~Ll 1811 (2151)
                      .  ++++...+.++
T Consensus       551 ~~~~~~~~~~~~l~  564 (888)
T d1qbkb_         551 GHHLNKPEYIQMLM  564 (888)
T ss_dssp             GGGGCSHHHHHHHH
T ss_pred             hccccchHHHHHHH
Confidence            3  34444444443


No 8  
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.02  E-value=2.5e+02  Score=32.32  Aligned_cols=81  Identities=19%  Similarity=0.188  Sum_probs=50.4

Q ss_pred             hHHHHHHHHHHHHhC-cc-----hHHHHHHHhhcCCccc---hhhHHHHHHHHHhhcCCCCCchHHHHHHHHHhccCCCh
Q 000120         1109 VALAKLALKNLLLTN-LD-----LFPACIDQCYYSDAAI---ADGYFSVLAEVYMRQEIPKCEIQRLLSLILYKVVDPSR 1179 (2151)
Q Consensus      1109 ~~lgr~AL~~LL~~N-~d-----Ll~~~i~rCY~~~~~v---a~~yF~vl~~v~~~~~~~~~~~~~LL~L~L~~lg~~~~ 1179 (2151)
                      +..+-++|..|.... ++     +++..++.....+..+   +-.++..+++.+....    -...++...+-.+.|+.+
T Consensus       458 R~~A~~~L~~l~~~~~~~~~~~~i~~~l~~~~~~~~~~~R~~~~~~l~~l~~~~~~~~----~~~~ilp~ll~~~~D~v~  533 (588)
T d1b3ua_         458 REAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDI----TTKHMLPTVLRMAGDPVA  533 (588)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHH----HHHHTHHHHHHGGGCSCH
T ss_pred             HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcChHH----HHHHHHHHHHHHcCCCCH
Confidence            456778888887763 22     4554443333333332   3445555555543211    123477777778899999


Q ss_pred             hHHHHHHHHHHHHh
Q 000120         1180 QIRDDALQMLETLS 1193 (2151)
Q Consensus      1180 ~IR~~A~~LL~~L~ 1193 (2151)
                      +||..|.+.|..+.
T Consensus       534 nVR~~a~~~l~~i~  547 (588)
T d1b3ua_         534 NVRFNVAKSLQKIG  547 (588)
T ss_dssp             HHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999884


No 9  
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.75  E-value=8e+02  Score=24.66  Aligned_cols=119  Identities=18%  Similarity=0.119  Sum_probs=65.6

Q ss_pred             HHHHHHHHHHHHhC--------CCChHHHHHHHHhcccccchhhHHHhHHHhh---hhhccccc----chHHHHHHHHHH
Q 000120         1926 CSVASNIALWCRAK--------SLDELGTVFVAYSRGEIKSIDNLLACVSPLL---WNEWFPKH----SALAFGHLLRLL 1990 (2151)
Q Consensus      1926 ~~~A~~la~~~~~~--------~~~~La~vl~~ya~~~f~~~~dfl~~~~~~l---~~~~fp~~----~~~~l~~L~~lL 1990 (2151)
                      ...|..|+.+|...        ....+..++..+.+...   ......++..|   ++..-+..    ....+..|+.+|
T Consensus        77 ~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~---~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL  153 (264)
T d1xqra1          77 WRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDAC---DTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAM  153 (264)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSC---HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHhhcCCC---HHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHH
Confidence            34566688888532        23445555555543321   23334333333   32222211    112367899999


Q ss_pred             hcCChHHHHHHHHHHHHhhcCCCCCC--CCchhhHHHHHHHhcCcC---HHHHHHHHHHHHh
Q 000120         1991 EKGPVEYQRVILLMLKALLQHTPMDA--SQSPHMYAIVSQLVESTL---CWEALSVLEALLQ 2047 (2151)
Q Consensus      1991 ~~~~~~~~~~~l~iL~~ll~~~~~~~--~~~~~l~~~l~rll~t~~---~~eAL~VL~~v~~ 2047 (2151)
                      ..+....+...+.+|..+...-+-..  ....+.+..+.++|+++.   -..|+..|.++..
T Consensus       154 ~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~lL~~~~~~~~~~a~~aL~~L~~  215 (264)
T d1xqra1         154 QQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVT  215 (264)
T ss_dssp             HSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHT
T ss_pred             hcCchHHHHHHHHHHHHHHhccHHHHHHHHHhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence            88888888888888888775533211  111234667778887654   4556666665543


No 10 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=8.74  E-value=1.2e+02  Score=27.32  Aligned_cols=33  Identities=21%  Similarity=0.137  Sum_probs=25.6

Q ss_pred             HHHcccccCCChhHHHHHHHHhCCCC-HHHHHHH
Q 000120          819 HFIFPSLKSGSEAHIHAATMALGHSH-LEACEIM  851 (2151)
Q Consensus       819 k~vvPlL~se~~~iRdAvV~aLG~in-~~~~~~L  851 (2151)
                      ..++..|..++..+|.+++.+||.++ ..+.+.|
T Consensus        25 ~~L~~~l~d~~~~vR~~a~~~L~~~~~~~~~~~L   58 (111)
T d1te4a_          25 EPLLESLSNEDWRIRGAAAWIIGNFQDERAVEPL   58 (111)
T ss_dssp             HHHHHGGGCSCHHHHHHHHHHHGGGCSHHHHHHH
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHhcchhhhHHHH
Confidence            45667899999999999999999886 4443333


Done!